Citrus Sinensis ID: 015784
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 400 | 2.2.26 [Sep-21-2011] | |||||||
| A5UMN6 | 435 | 5-methylthioadenosine/S-a | yes | no | 0.895 | 0.822 | 0.383 | 2e-66 | |
| Q8PUQ3 | 432 | 5-methylthioadenosine/S-a | yes | no | 0.887 | 0.821 | 0.360 | 4e-58 | |
| Q466Q9 | 432 | 5-methylthioadenosine/S-a | yes | no | 0.887 | 0.821 | 0.360 | 2e-57 | |
| Q8TRA4 | 432 | 5-methylthioadenosine/S-a | yes | no | 0.882 | 0.817 | 0.350 | 5e-56 | |
| B0K2W0 | 431 | 5-methylthioadenosine/S-a | yes | no | 0.892 | 0.828 | 0.338 | 1e-55 | |
| B0K8R8 | 431 | 5-methylthioadenosine/S-a | yes | no | 0.892 | 0.828 | 0.338 | 1e-55 | |
| Q0AYV2 | 431 | 5-methylthioadenosine/S-a | yes | no | 0.892 | 0.828 | 0.354 | 4e-55 | |
| A5D1G6 | 433 | 5-methylthioadenosine/S-a | yes | no | 0.895 | 0.826 | 0.348 | 3e-54 | |
| Q92342 | 463 | Uncharacterized protein C | yes | no | 0.917 | 0.792 | 0.316 | 1e-50 | |
| O27549 | 427 | 5-methylthioadenosine/S-a | yes | no | 0.842 | 0.789 | 0.363 | 2e-50 |
| >sp|A5UMN6|MTAD_METS3 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=mtaD PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 253 bits (646), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 148/386 (38%), Positives = 228/386 (59%), Gaps = 28/386 (7%)
Query: 17 SSSTMILHNAVIVT-MD-KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ 74
+ +T+++ +A+I+ +D KE + G + + D+I IG D D++ID +
Sbjct: 2 TDNTILIKDALILNPLDFKEIK----GSLLIKNDKIAEIGTDID-----ESNVDKVIDAK 52
Query: 75 SQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIEL 134
+ILLPGFVNTH H S L +G+ADD+ L +WL+D IWP E+N+T E YI LL IEL
Sbjct: 53 GKILLPGFVNTHTHLSMTLFRGLADDLSLDSWLNDNIWPMEANLTSEYCYIGALLGAIEL 112
Query: 135 IHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK 194
I SG T F++ ++ ++AKAVE G+RA L +D G+ + I+
Sbjct: 113 IKSGTTTFSDM-YFYMEDVAKAVEESGIRAVLSYGMIDFGDD-------EKREHEIKENI 164
Query: 195 ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254
L+ K + ADGRI+++FG A+ LL + R +A E+ TGIH+HV+E E +
Sbjct: 165 ALFEKCNGMADGRIKVFFGPHSPYTASKDLLEDVRWLANEYNTGIHIHVSETQKEINDSL 224
Query: 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GF 313
+ D +LD I FL ++++AH+VW++H EI ++ R VK+SH P S M++ G
Sbjct: 225 EAH--DLRPFEYLDSIGFLGPDVVAAHSVWLSHNEIEIIKRNNVKISHNPCSNMKLASGI 282
Query: 314 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373
API++++ DICV +GTDGA SNN + +++E+ ASL+ K + +P AL +
Sbjct: 283 APIQDLITNDICVGIGTDGASSNNNLDLIEELRTASLLQKVNLL------NPKALTSNEA 336
Query: 374 LRMATINGAKSVLWDNDIGSLEAGKK 399
L M TI GA+ + + +IGS+E GKK
Sbjct: 337 LAMGTIKGAEVLGLEQEIGSIEVGKK 362
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) (taxid: 420247) EC: 3EC: .EC: 5EC: .EC: 4EC: .EC: 3EC: 1 |
| >sp|Q8PUQ3|MTAD_METMA 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=mtaD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 225 bits (574), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 206/380 (54%), Gaps = 25/380 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA ++TMD ++ + G V + +I IG + + AD +ID + +++P
Sbjct: 4 IIIKNAYVLTMDPDAGDIKKGTVVIEDGKITEIGV------KTKESADTVIDAKGSVVMP 57
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G VNTH H + L +G ADD+ L WL IWP E+ +T ED Y +LL +E+I SG T
Sbjct: 58 GLVNTHTHAAMTLFRGYADDLQLAEWLEKHIWPAEAQLTAEDVYRGSLLACLEMIRSGTT 117
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
FA+ + E AKAVE GLRA L GL W ++ ++ K
Sbjct: 118 SFADM-YFFMDETAKAVEASGLRASL-------SHGLIELWNEEKGENDLKEGKRFVRAW 169
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
AA GRI+ +G +D L + ++ AR+ G+H+HV E E +++ +
Sbjct: 170 QGAAKGRIKTMYGPHAPNTCSDEFLAKVKEAARQDGAGLHIHVLET--EAELLAMKERYG 227
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIKEM 319
+V LD I F ++L+AH VW++ +I +L GV VSH P S M++ G AP+ +M
Sbjct: 228 KCSVHMLDDIGFFGPDVLAAHCVWLSDGDIEVLREKGVNVSHNPISNMKLASGTAPVYKM 287
Query: 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 379
L + VSLGTDG SNN + + +EM A+L++K T +P ALPA VL+MAT+
Sbjct: 288 LERGVNVSLGTDGCASNNNLDLFEEMKTAALLHK------LSTCNPTALPARQVLQMATV 341
Query: 380 NGAKSVLWDNDIGSLEAGKK 399
NGAK++ + G L+ G K
Sbjct: 342 NGAKAL--GTETGMLKTGMK 359
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) (taxid: 192952) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|Q466Q9|MTAD_METBF 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 223 bits (567), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 137/380 (36%), Positives = 205/380 (53%), Gaps = 25/380 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA ++TMD + +NG V + +I IG+ + S+ AD +ID + +++P
Sbjct: 4 IIVKNAYVMTMDPDEGDLKNGTVVIEDGKITEIGE------KTSESADTVIDAKHSVVMP 57
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G VNTH H + L +G ADD+ L WL IWP E+ +T ED Y +LL +E+I SG T
Sbjct: 58 GLVNTHTHAAMTLFRGYADDLQLADWLEGHIWPAEAKLTAEDVYKGSLLACLEMIRSGTT 117
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
FA+ ++ E AKAVE GLRA L GL W ++ K
Sbjct: 118 SFADM-YFYMDETAKAVEASGLRASLCH-------GLIELWNEEKGATDLKEGKRFVRAW 169
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
AADGRI+ +G ++ L + R+ A GIH+H+ E E +++ +
Sbjct: 170 QGAADGRIKTMYGPHAPNTCSEEFLAKVREEANRDGAGIHIHLLET--EAELLAMKERYG 227
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIKEM 319
+V L+ I FL ++L+AH VW++ +I +L + GV VSH S M++ G AP+ +M
Sbjct: 228 KCSVHLLEDIGFLGPDVLAAHCVWLSDGDIEILGKRGVNVSHNVISNMKLASGIAPVYKM 287
Query: 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 379
L + VSLGTDG SNN + + +EM A+L++K T P ALPA VL+M T+
Sbjct: 288 LEKGVNVSLGTDGCASNNNLDLFEEMKTAALLHK------VNTFSPTALPARQVLQMGTV 341
Query: 380 NGAKSVLWDNDIGSLEAGKK 399
NGAK++ + G L+ G K
Sbjct: 342 NGAKAL--GTETGMLKVGMK 359
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Methanosarcina barkeri (strain Fusaro / DSM 804) (taxid: 269797) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|Q8TRA4|MTAD_METAC 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=mtaD PE=3 SV=2 | Back alignment and function description |
|---|
Score = 218 bits (556), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 134/382 (35%), Positives = 206/382 (53%), Gaps = 29/382 (7%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA ++TMD ++ +NG V + +I IG++ + AD +ID + +++P
Sbjct: 4 IIIKNAYVLTMDPDAGDLKNGTVVIEDGKITEIGENT------KENADTVIDAKGSVVMP 57
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G NTH H + L +G ADD+ L WL IWP E+ + ED Y +LL +E+I SG T
Sbjct: 58 GLANTHTHAAMTLFRGYADDLQLAEWLEKHIWPAEAQLKAEDVYKGSLLACLEMIKSGTT 117
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
FA+ ++ E AKAVE GLRA L GL W + ++ K
Sbjct: 118 SFADM-YFYMDETAKAVEASGLRASL-------SHGLIELWNEEKGEADLKEGKRFVRAW 169
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
AADGRI+ +G ++ L + ++ A G+H+HV E E ++ K
Sbjct: 170 QGAADGRIKTMYGPHAPNTCSEEFLTKVKEEAHRDGAGLHIHVLETEAE----LNAMKER 225
Query: 261 HG--TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIK 317
+G +V L+ I F ++L+AH VW++ +I +L + V VSH P S M++ G AP+
Sbjct: 226 YGKCSVHLLEDIGFFGPDVLAAHCVWLSDGDIEILRQREVNVSHNPISNMKLASGIAPVY 285
Query: 318 EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377
+ML + V+LGTDG SNN + + +E+ A+L++K T +P ALPA VL MA
Sbjct: 286 KMLEKGVNVTLGTDGCASNNNLDLFEEIKTAALLHK------VSTGNPTALPARQVLEMA 339
Query: 378 TINGAKSVLWDNDIGSLEAGKK 399
T+NGAK++ + G L+ GKK
Sbjct: 340 TVNGAKAL--GTETGMLKVGKK 359
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) (taxid: 188937) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|B0K2W0|MTAD_THEPX 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter sp. (strain X514) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 202/381 (53%), Gaps = 24/381 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ-SADILQQFSQMADQIIDLQSQILL 79
+++ N +++M +E + N +++ D I IG+ + DI D++ID +I
Sbjct: 3 LLIKNVALLSMKEEQPLMENTNIYIEGDTITYIGEINPDI------KVDRVIDGTKKIAT 56
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PG +N H H L + ADDV L WL IWP ES ++ ED Y +LL IE+I+SG
Sbjct: 57 PGLINAHTHLGMSLLRNYADDVPLFDWLSKHIWPVESKLSAEDVYWGSLLSMIEMIYSGT 116
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
T F + + E+AKA E +G+R L + ++ + + ++ ++LY
Sbjct: 117 TTFCDMYF-FMDEVAKATEEVGIRGVLTRGIIEESDA-------EINKEKLRDTRKLYNT 168
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259
H+ ADGRI++ G + L E ++A+E TGIH+HV+E + +V +K
Sbjct: 169 WHNKADGRIKVMVGPHAPYTCSSSYLKEVVELAKELNTGIHIHVSET--KKEVEESFQKH 226
Query: 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIKE 318
V L I ++AH V V+ + +L V + P S ++ GFAP+ +
Sbjct: 227 GKSPVKHLKDIGVFDVPTVAAHCVHVSDEDTEILKEMKVSPVYNPTSNAKLASGFAPVDQ 286
Query: 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378
ML I V+LGTDG SNN +++ +E++ A+ INK D A+PA L+MAT
Sbjct: 287 MLKKGINVALGTDGPASNNNLNMFEEIHFAATINKAL------NYDALAVPALEALKMAT 340
Query: 379 INGAKSVLWDNDIGSLEAGKK 399
INGAK++LWD +IGS+E GKK
Sbjct: 341 INGAKALLWDKEIGSIEVGKK 361
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Thermoanaerobacter sp. (strain X514) (taxid: 399726) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|B0K8R8|MTAD_THEP3 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 217 bits (552), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 202/381 (53%), Gaps = 24/381 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ-SADILQQFSQMADQIIDLQSQILL 79
+++ N +++M +E + N +++ D I IG+ + DI D++ID +I
Sbjct: 3 LLIKNVALLSMKEEQPLMENTNIYIEGDTITYIGEINPDI------KVDRVIDGTKKIAT 56
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PG +N H H L + ADDV L WL IWP ES ++ ED Y +LL IE+I+SG
Sbjct: 57 PGLINAHTHLGMSLLRNYADDVPLFDWLSKHIWPVESKLSAEDVYWGSLLSMIEMIYSGT 116
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
T F + + E+AKA E +G+R L + ++ + + ++ ++LY
Sbjct: 117 TTFCDMYF-FMDEVAKATEEVGIRGVLTRGIIEESDA-------EINKEKLRDTRKLYNT 168
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259
H+ ADGRI++ G + L E ++A+E TGIH+HV+E + +V +K
Sbjct: 169 WHNKADGRIKVMVGPHAPYTCSSSYLKEVVELAKELNTGIHIHVSET--KKEVEESFQKH 226
Query: 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIKE 318
V L I ++AH V V+ + +L V + P S ++ GFAP+ +
Sbjct: 227 GKSPVKHLKDIGVFDVPTVAAHCVHVSDEDTEILKEMKVSPVYNPTSNAKLASGFAPVDQ 286
Query: 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378
ML I V+LGTDG SNN +++ +E++ A+ INK D A+PA L+MAT
Sbjct: 287 MLKKGINVALGTDGPASNNNLNMFEEIHFAATINKAL------NYDALAVPALEALKMAT 340
Query: 379 INGAKSVLWDNDIGSLEAGKK 399
INGAK++LWD +IGS+E GKK
Sbjct: 341 INGAKALLWDKEIGSIEVGKK 361
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) (taxid: 340099) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|Q0AYV2|MTAD_SYNWW 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 215 bits (548), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 135/381 (35%), Positives = 201/381 (52%), Gaps = 24/381 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++L N I+ + + G + + IK +G +F D IID ++Q+LLP
Sbjct: 3 ILLDNISIIPVSGSNSFIEKGYLLIEDVFIKELGTGKAPEGEF----DHIIDGENQVLLP 58
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
GF+N H H + L +G ADD+ LM WL ++IWP E+ +T ED Y T+L +E+I SG T
Sbjct: 59 GFINAHTHAAMTLLRGYADDLPLMEWLENKIWPLEAKLTPEDIYWGTMLAIVEMIKSGTT 118
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
F + + E+A+AVEL G+RA L + + G P S + I+ +EL K
Sbjct: 119 TFNDMYFC-MDEVARAVELSGMRAVLARGMVGVG---PES------EQAIEDSRELIGKW 168
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
A GRI G L ++ E + GIH+HVAE E + ++ ++
Sbjct: 169 QGQAGGRISFRLGPHAPYTCPPAYLERVMQLSDELQAGIHIHVAETRVEYEDIL--KQYG 226
Query: 261 HGTVTFLDKIEFLQ-NNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIKE 318
V+ L+ + Q +L+AH V +N EIG+L + V V+H P S M++ G AP+
Sbjct: 227 KTPVSHLESLGLFQGRQVLAAHCVHLNEEEIGILHQYQVGVAHNPESNMKLASGIAPVPR 286
Query: 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378
ML + I V+LGTDGA SNN + ++ EM +S ++K T DP LPA L MAT
Sbjct: 287 MLESGIAVALGTDGASSNNNLDMLQEMRSSSFLHK------VNTMDPMVLPAYQALEMAT 340
Query: 379 INGAKSVLWDNDIGSLEAGKK 399
NGA S+ N++G LE G +
Sbjct: 341 ANGAISLGMGNELGRLEPGYR 361
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Syntrophomonas wolfei subsp. wolfei (strain Goettingen) (taxid: 335541) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|A5D1G6|MTAD_PELTS 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 134/384 (34%), Positives = 204/384 (53%), Gaps = 26/384 (6%)
Query: 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
+ +++ A ++TM+ V+R+G + + + I ++G + + F + ID +
Sbjct: 2 ANILIQGATVLTMEGPDGVYRDGEIAIAGNSILSVGPRGSVPEGFRP--GRSIDGTGMVA 59
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
+PGFVN H H + L + ADD+ LM WL ++IWP E + ED Y T+LC +E+I SG
Sbjct: 60 MPGFVNCHTHAAMTLLRSYADDMPLMKWLSEKIWPVEERLQPEDIYWGTMLCCLEMIKSG 119
Query: 139 VTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198
T FA+ + +A AVE G+RACL + + G G A + D+ + +E
Sbjct: 120 TTTFADMYFS-MERVAAAVEESGMRACLSRGMIGVGSG-----ARKAIDESLSFVREW-- 171
Query: 199 KHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258
+ ADGRI FG L + D+A GIH+HVAE E + + +
Sbjct: 172 --NGGADGRITAMFGPHAPYTCPPEYLKKVVDLAAREGAGIHIHVAETRDEIEQI----R 225
Query: 259 VDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAP 315
+GT V +LD + +L+AH V ++ +I +LS V ++HCP S M++ G AP
Sbjct: 226 AGYGTTPVRYLDAAGVFELPVLAAHCVHLDEGDIEILSAKRVGIAHCPESNMKLASGIAP 285
Query: 316 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375
+ E+L A V LGTDGA SNN + +++EM ASL++K T DP ALP+ LR
Sbjct: 286 VTELLQAGAAVGLGTDGAASNNNLDMLEEMRSASLLHK------VSTGDPLALPSFEALR 339
Query: 376 MATINGAKSVLWDNDIGSLEAGKK 399
MAT GA + L D+G L+ G K
Sbjct: 340 MATAGGALA-LGLKDVGLLKPGMK 362
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) (taxid: 370438) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
| >sp|Q92342|YDI4_SCHPO Uncharacterized protein C1F8.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F8.04c PE=3 SV=1 | Back alignment and function description |
|---|
Score = 200 bits (509), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/392 (31%), Positives = 203/392 (51%), Gaps = 25/392 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVV--QDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
M+ +A I+T++ + +G + V + I IG++ ++ + + L+ I+
Sbjct: 1 MLYTHANIITVNPTRDILIDGAILVKDGSNTIDDIGKTDRLVSIYPNEKHK--SLEGHIV 58
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
+PG ++ HVH +Q L + ADD+ L++WL D +W + N T+ED Y+++ L E++ SG
Sbjct: 59 MPGLISLHVHLAQSLLRSAADDLPLISWLCDTVWKMQGNFTQEDGYVASQLTIAEMLKSG 118
Query: 139 VTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMD-----CGEGLPASWAVRTTDDCI 190
T F EA + KAV G+R C+ + MD G+ + + +
Sbjct: 119 TTTFVEALFAQRYGIEGAVKAVIESGIRGCIGKVVMDQPRYATQTGVSMHEGLIENSNSL 178
Query: 191 QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250
E ++K H +GR+ IWFG R ++ L + +AR GI MH AE+ +
Sbjct: 179 NQAVESHSKFHGKGNGRVEIWFGARTPGGVSEELYRKMVKIARANNIGITMHCAEVKADR 238
Query: 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR--AGVKVSHCPASAM 308
+ +H +T+ + L + AH V ++ ++ +L + G V+HCP S
Sbjct: 239 EFFASK---EHTPMTYCKDLGLLGPKTVLAHMVHLDTQDLEILEKHGNGTSVAHCPVSNS 295
Query: 309 RM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAA 367
++ G AP+KEML I V +G DG P NN M ++ EM +ASL+ K DP+
Sbjct: 296 KLGSGIAPLKEMLEKSIIVGIGCDGCPCNNTMDLLQEMKMASLLPKALH------GDPSI 349
Query: 368 LPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
+PAE ++ MATINGAK+ L +D+GSLE GKK
Sbjct: 350 VPAEKIVEMATINGAKA-LGRDDLGSLEVGKK 380
|
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) |
| >sp|O27549|MTAD_METTH 5-methylthioadenosine/S-adenosylhomocysteine deaminase OS=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) GN=mtaD PE=3 SV=1 | Back alignment and function description |
|---|
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 132/363 (36%), Positives = 192/363 (52%), Gaps = 26/363 (7%)
Query: 38 FRNGGVFVVQDRIKAIGQSADILQQFSQM-ADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96
R G V + +RI AD+ S AD +ID ++L+PG VNTH H S L +G
Sbjct: 19 IRRGSVLIEDNRI------ADVSNTLSPGDADTVIDGTGKLLIPGLVNTHTHLSMTLFRG 72
Query: 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKA 156
IADD+ L WL+D IWP E+ + + Y LL IE+I SG T F + ++ +A+A
Sbjct: 73 IADDLPLDRWLNDHIWPAEARLNGDYCYAGALLGCIEMIRSGTTSFNDM-YFYMDHVARA 131
Query: 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ 216
VE GLR + +D G+ + +R + + + + H AD RIR+ G
Sbjct: 132 VEEAGLRCVISHGMIDLGDTEKMTAELRES-------RRIIKECHGMADDRIRVALGPHS 184
Query: 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN 276
++ LL ET +A + IH+HV+E EN+V +R V +LD++ L
Sbjct: 185 PYTCSEELLKETAALADKNDLMIHIHVSET--ENEVSEVSRSHGMTPVEYLDEVGVLGPR 242
Query: 277 LLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIKEMLHADICVSLGTDGAPS 335
++AH VW+ EI +L+ VKVSH P+S M++ G +P+ +L + VSLGTDGA S
Sbjct: 243 TVAAHCVWLKDWEIDVLAERDVKVSHNPSSNMKLASGVSPVARLLQRGVNVSLGTDGAAS 302
Query: 336 NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395
NN + + EM ASL+ K DP ALPA V MAT+NGA+++ D G +
Sbjct: 303 NNNLDMFQEMKTASLLQK------VNLEDPTALPAMDVFSMATLNGARAL--GIDAGLIA 354
Query: 396 AGK 398
GK
Sbjct: 355 PGK 357
|
Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L-homocysteine, respectively. Is also able to deaminate adenosine. Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) (taxid: 187420) EC: 3 EC: . EC: 5 EC: . EC: 4 EC: . EC: 3 EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 400 | ||||||
| 255547626 | 471 | Atrazine chlorohydrolase, putative [Rici | 0.957 | 0.813 | 0.827 | 0.0 | |
| 147857762 | 470 | hypothetical protein VITISV_008190 [Viti | 0.957 | 0.814 | 0.819 | 0.0 | |
| 225425192 | 469 | PREDICTED: 5-methylthioadenosine/S-adeno | 0.957 | 0.816 | 0.819 | 0.0 | |
| 449468824 | 484 | PREDICTED: 5-methylthioadenosine/S-adeno | 0.955 | 0.789 | 0.821 | 0.0 | |
| 296088709 | 493 | unnamed protein product [Vitis vinifera] | 0.957 | 0.776 | 0.771 | 0.0 | |
| 357152672 | 468 | PREDICTED: 5-methylthioadenosine/S-adeno | 0.957 | 0.818 | 0.75 | 1e-174 | |
| 226502244 | 468 | LOC100283572 [Zea mays] gi|195635661|gb| | 0.942 | 0.805 | 0.756 | 1e-173 | |
| 115488528 | 471 | Os12g0468600 [Oryza sativa Japonica Grou | 0.942 | 0.800 | 0.743 | 1e-170 | |
| 168021897 | 561 | predicted protein [Physcomitrella patens | 0.937 | 0.668 | 0.694 | 1e-157 | |
| 302824689 | 473 | hypothetical protein SELMODRAFT_431949 [ | 0.945 | 0.799 | 0.664 | 1e-154 |
| >gi|255547626|ref|XP_002514870.1| Atrazine chlorohydrolase, putative [Ricinus communis] gi|223545921|gb|EEF47424.1| Atrazine chlorohydrolase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 676 bits (1744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/383 (82%), Positives = 347/383 (90%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
SS +ILHNA IVTMD ESRVFRNGGVF+ QD+IKAIGQS+DIL ++S +AD II+L Q
Sbjct: 7 SSVLIILHNAAIVTMDAESRVFRNGGVFIEQDKIKAIGQSSDILGEYSTIADHIINLHGQ 66
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
LLPGFVNTHVHTSQQL +GIADDVDLMTWLH RIWPYESNMTE DSYISTLLCGIELIH
Sbjct: 67 FLLPGFVNTHVHTSQQLGRGIADDVDLMTWLHRRIWPYESNMTELDSYISTLLCGIELIH 126
Query: 137 SGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL 196
SGVTCFAEAGGQHVS MAKA E LGLRACL QS MD GEGLP SWA RTTDDCIQSQKEL
Sbjct: 127 SGVTCFAEAGGQHVSGMAKAAEELGLRACLTQSVMDSGEGLPPSWASRTTDDCIQSQKEL 186
Query: 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
Y K+H+ A+GRIR+WFGIRQIMN+TDRLLLETRD+ARE TGIHMHV+EI YENQVVMDT
Sbjct: 187 YEKYHNTAEGRIRVWFGIRQIMNSTDRLLLETRDIARELNTGIHMHVSEIAYENQVVMDT 246
Query: 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPI 316
RKV+HGTVTFLDKI+FLQ NLL+AHTVWVN+ EIGLLSRAGVKVSHCPASAMRMLGFAPI
Sbjct: 247 RKVEHGTVTFLDKIDFLQKNLLAAHTVWVNNAEIGLLSRAGVKVSHCPASAMRMLGFAPI 306
Query: 317 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376
KEML + ICVS+GTDGAPSNNRMS+VDEMYLASL+NKGREVF NGTT+P LPAETVL+M
Sbjct: 307 KEMLDSSICVSVGTDGAPSNNRMSMVDEMYLASLMNKGREVFTNGTTNPTVLPAETVLKM 366
Query: 377 ATINGAKSVLWDNDIGSLEAGKK 399
TINGAK+VLWD++IGS+E GKK
Sbjct: 367 VTINGAKTVLWDDEIGSIEVGKK 389
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147857762|emb|CAN80808.1| hypothetical protein VITISV_008190 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/383 (81%), Positives = 343/383 (89%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
SSS +LHNA+IVTMD E+RVF NG + V +DRI A+GQS +I QF+ +A + DL Q
Sbjct: 5 SSSVTLLHNALIVTMDSETRVFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFDLHGQ 64
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
ILLPGF+NTHVHTSQQL +GIADDVDLMTWLH+RIWPYESNMTEEDSYISTLLCGIELIH
Sbjct: 65 ILLPGFINTHVHTSQQLGRGIADDVDLMTWLHERIWPYESNMTEEDSYISTLLCGIELIH 124
Query: 137 SGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL 196
SGVTCFAEAGGQHVSEMA+AVELLGLRACLVQSTMD G+GLP SWA RTTDDCIQSQKEL
Sbjct: 125 SGVTCFAEAGGQHVSEMARAVELLGLRACLVQSTMDSGQGLPPSWADRTTDDCIQSQKEL 184
Query: 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
Y KHH ADGRIRIW GIRQIMNATDRLLLETRD+A+E KTGIHMHVAEI YENQVV DT
Sbjct: 185 YEKHHDTADGRIRIWLGIRQIMNATDRLLLETRDVAKELKTGIHMHVAEISYENQVVKDT 244
Query: 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPI 316
RKVD+GTV +L+KI+ L NLL+AHTVWVN TEIG LSRAGVKVSHCPASAMRMLGFAPI
Sbjct: 245 RKVDYGTVAYLEKIDLLNGNLLAAHTVWVNDTEIGFLSRAGVKVSHCPASAMRMLGFAPI 304
Query: 317 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376
KEML A ICVSLGTDGAPSNNRMSIVD+MYLASLINKGREV+ GTTDP ALPAET+L+M
Sbjct: 305 KEMLDAGICVSLGTDGAPSNNRMSIVDDMYLASLINKGREVYKLGTTDPTALPAETILKM 364
Query: 377 ATINGAKSVLWDNDIGSLEAGKK 399
ATINGAK+VLW+N+IGSLE GKK
Sbjct: 365 ATINGAKTVLWENEIGSLEIGKK 387
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225425192|ref|XP_002265828.1| PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/383 (81%), Positives = 344/383 (89%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
SSS +LHNA+IVTMD E+RVF NG + V +DRI A+GQS +I QF+ +A + DL Q
Sbjct: 5 SSSVTLLHNALIVTMDSETRVFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFDLHGQ 64
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
ILLPGF+NTHVHTSQQL +GIADDVDLMTWLH+RIWPYESNMTEEDSYISTLLCGIELIH
Sbjct: 65 ILLPGFINTHVHTSQQLGRGIADDVDLMTWLHERIWPYESNMTEEDSYISTLLCGIELIH 124
Query: 137 SGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL 196
SGVTCFAEAGGQHVSEMA+AVELLGLRACLVQSTMD G+GLP SWA RTTDDCIQSQKEL
Sbjct: 125 SGVTCFAEAGGQHVSEMARAVELLGLRACLVQSTMDSGQGLPPSWADRTTDDCIQSQKEL 184
Query: 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
Y KHH ADGRIRIW GIRQIMNATDRLLLETRD+A+E KTGIHMHVAEI YENQVV DT
Sbjct: 185 YEKHHDTADGRIRIWLGIRQIMNATDRLLLETRDVAKELKTGIHMHVAEISYENQVVKDT 244
Query: 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPI 316
RKVD+GTV++L+KI+ L NLL+AHTVWVN TEIG LSRAGVKVSHCPASAMRMLGFAPI
Sbjct: 245 RKVDYGTVSYLEKIDLLNGNLLAAHTVWVNDTEIGFLSRAGVKVSHCPASAMRMLGFAPI 304
Query: 317 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376
KEML A ICVSLGTDGAPSNNRMSIVD+MYLASLINKGREV+ GTTDP ALPAET+L+M
Sbjct: 305 KEMLDAGICVSLGTDGAPSNNRMSIVDDMYLASLINKGREVYKLGTTDPTALPAETILKM 364
Query: 377 ATINGAKSVLWDNDIGSLEAGKK 399
ATINGAK+VLW+N+IGSLE GKK
Sbjct: 365 ATINGAKTVLWENEIGSLEIGKK 387
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449468824|ref|XP_004152121.1| PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like [Cucumis sativus] gi|449484683|ref|XP_004156951.1| PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/382 (82%), Positives = 340/382 (89%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
+S +LHNA+I+TMD SRVFRNGG+ + D+IKAIG S++IL QFS A IIDL SQI
Sbjct: 21 NSLTLLHNALIITMDSHSRVFRNGGIVISGDKIKAIGHSSEILHQFSASAHHIIDLHSQI 80
Query: 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHS 137
LLPGF+NTHVHTSQQLA+ IADDVDLMTWLH RIWPYESNMTEEDSYISTLLCGIELIHS
Sbjct: 81 LLPGFINTHVHTSQQLARSIADDVDLMTWLHHRIWPYESNMTEEDSYISTLLCGIELIHS 140
Query: 138 GVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197
GVTCFAEAGGQHVS MAKAVELLGLRACL QS MDCGEGLPA WA TTDDCIQSQKELY
Sbjct: 141 GVTCFAEAGGQHVSGMAKAVELLGLRACLTQSIMDCGEGLPAPWAAVTTDDCIQSQKELY 200
Query: 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257
KHH+ ADGRIRIWFGIRQIMNATDRLL+ETRD A E +TGIHMHVAEI YENQ V++ R
Sbjct: 201 KKHHNTADGRIRIWFGIRQIMNATDRLLIETRDNALELETGIHMHVAEIAYENQKVINER 260
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIK 317
KVDHGTVT+L+KI+FL NNLLSAHTVWVN EI LSR GVKVSHCPASAMRMLGFAPI+
Sbjct: 261 KVDHGTVTYLEKIQFLGNNLLSAHTVWVNDNEISFLSRNGVKVSHCPASAMRMLGFAPIR 320
Query: 318 EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377
EML A ICVS+GTDGAPSNNRMSIVDEMYLASLINKGREV+ANGTT+P+ LPAE VL+M
Sbjct: 321 EMLDAGICVSIGTDGAPSNNRMSIVDEMYLASLINKGREVYANGTTNPSVLPAEVVLQMV 380
Query: 378 TINGAKSVLWDNDIGSLEAGKK 399
TINGAKSVLWDN+IGSLE GKK
Sbjct: 381 TINGAKSVLWDNEIGSLEVGKK 402
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|296088709|emb|CBI38159.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 655 bits (1689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/407 (77%), Positives = 344/407 (84%), Gaps = 24/407 (5%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
SSS +LHNA+IVTMD E+RVF NG + V +DRI A+GQS +I QF+ +A + DL Q
Sbjct: 5 SSSVTLLHNALIVTMDSETRVFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFDLHGQ 64
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
ILLPGF+NTHVHTSQQL +GIADDVDLMTWLH+RIWPYESNMTEEDSYISTLLCGIELIH
Sbjct: 65 ILLPGFINTHVHTSQQLGRGIADDVDLMTWLHERIWPYESNMTEEDSYISTLLCGIELIH 124
Query: 137 SGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL 196
SGVTCFAEAGGQHVSEMA+AVELLGLRACLVQSTMD G+GLP SWA RTTDDCIQSQKEL
Sbjct: 125 SGVTCFAEAGGQHVSEMARAVELLGLRACLVQSTMDSGQGLPPSWADRTTDDCIQSQKEL 184
Query: 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
Y KHH ADGRIRIW GIRQIMNATDRLLLETRD+A+E KTGIHMHVAEI YENQVV DT
Sbjct: 185 YEKHHDTADGRIRIWLGIRQIMNATDRLLLETRDVAKELKTGIHMHVAEISYENQVVKDT 244
Query: 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE------------------------IGL 292
RKVD+GTV++L+KI+ L NLL+AHTVWVN TE IG
Sbjct: 245 RKVDYGTVSYLEKIDLLNGNLLAAHTVWVNDTEHLLLRLSIKSKLATRESLISESVSIGF 304
Query: 293 LSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLIN 352
LSRAGVKVSHCPASAMRMLGFAPIKEML A ICVSLGTDGAPSNNRMSIVD+MYLASLIN
Sbjct: 305 LSRAGVKVSHCPASAMRMLGFAPIKEMLDAGICVSLGTDGAPSNNRMSIVDDMYLASLIN 364
Query: 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
KGREV+ GTTDP ALPAET+L+MATINGAK+VLW+N+IGSLE GKK
Sbjct: 365 KGREVYKLGTTDPTALPAETILKMATINGAKTVLWENEIGSLEIGKK 411
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357152672|ref|XP_003576198.1| PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase-like isoform 1 [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 619 bits (1595), Expect = e-174, Method: Compositional matrix adjust.
Identities = 288/384 (75%), Positives = 339/384 (88%), Gaps = 1/384 (0%)
Query: 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS 75
SS+ ++LHNA +VTMD V R+G V V+ DRI A+G SAD+L F + A Q +DL
Sbjct: 4 ASSADVVLHNAFVVTMDSADAVLRDGAVAVMGDRIAAVGPSADVLAAFPRAA-QTLDLAG 62
Query: 76 QILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELI 135
+IL+PGFVNTHVHTSQQLA+GIADDVDLMTWLH RIWPYES+MTEEDSY STLLC IELI
Sbjct: 63 RILIPGFVNTHVHTSQQLARGIADDVDLMTWLHGRIWPYESHMTEEDSYASTLLCCIELI 122
Query: 136 HSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE 195
SGVTCFAEAGGQ+VSEMA+AVELLGLRACL +STMDCG+GLP +W+ +TDDCIQSQK+
Sbjct: 123 RSGVTCFAEAGGQYVSEMARAVELLGLRACLTKSTMDCGDGLPPNWSSCSTDDCIQSQKD 182
Query: 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255
LYAKHH+ ADGRIRIWFG+RQIMNATDRLLLETRD+A+E TGIHMH+AEIP+ENQ+VM
Sbjct: 183 LYAKHHNTADGRIRIWFGLRQIMNATDRLLLETRDVAQELNTGIHMHIAEIPHENQLVMR 242
Query: 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAP 315
T+ +DHGTVT+L+KI+FL++NLL+AH+VW+N EI S+AGVKVSHCPASAMR+LGFAP
Sbjct: 243 TKGIDHGTVTYLEKIDFLRSNLLAAHSVWLNEPEINHFSKAGVKVSHCPASAMRLLGFAP 302
Query: 316 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375
I+EML + +CVSLGTDGAPSNNRMSIVDEMYLASLINKGREV+ GTT+P ALP+ETVL+
Sbjct: 303 IREMLDSGVCVSLGTDGAPSNNRMSIVDEMYLASLINKGREVYIGGTTNPTALPSETVLK 362
Query: 376 MATINGAKSVLWDNDIGSLEAGKK 399
MATINGAK+VLWD++IGSLE GKK
Sbjct: 363 MATINGAKAVLWDDEIGSLEVGKK 386
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|226502244|ref|NP_001149944.1| LOC100283572 [Zea mays] gi|195635661|gb|ACG37299.1| amidohydrolase family protein [Zea mays] | Back alignment and taxonomy information |
|---|
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 286/378 (75%), Positives = 331/378 (87%), Gaps = 1/378 (0%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
+ HNAVIVTMD RV ++G V V DRI A+G SAD+L F A Q +DL +I+LP
Sbjct: 10 VFHNAVIVTMDDAFRVLQDGAVAVAGDRIAAVGPSADVLAAFP-CAVQTLDLGGRIVLPE 68
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
VNTHVHTSQQLA+GIADDVDLMTWLH RIWPYES+MTEEDSY STLLCGIELI SGVTC
Sbjct: 69 LVNTHVHTSQQLARGIADDVDLMTWLHGRIWPYESHMTEEDSYASTLLCGIELIRSGVTC 128
Query: 142 FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
FAEAGGQ VSEMA+AVELLG RACL +STMDCG+GLP +W+ +TDDCIQSQKELY KHH
Sbjct: 129 FAEAGGQFVSEMARAVELLGFRACLTKSTMDCGDGLPPNWSCCSTDDCIQSQKELYEKHH 188
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ ADGRIRIWFG+RQIMNATDRLLLETRD+A++ TGIHMH+AEIPYENQ+++ T+ +DH
Sbjct: 189 NTADGRIRIWFGLRQIMNATDRLLLETRDIAQKLNTGIHMHIAEIPYENQLILRTKGIDH 248
Query: 262 GTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLH 321
GTVT+L+KI+FL++NLL+AH+VW+N EIG S+AGVKVSHCPASAMRMLGFAPI+EML
Sbjct: 249 GTVTYLEKIDFLRSNLLAAHSVWLNVPEIGFFSKAGVKVSHCPASAMRMLGFAPIREMLD 308
Query: 322 ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381
+ +CVSLGTDGAPSNNRMSIVDEMYLASLINKGRE + +GTT+P ALPAETVL+MATING
Sbjct: 309 SGVCVSLGTDGAPSNNRMSIVDEMYLASLINKGREAYISGTTNPTALPAETVLKMATING 368
Query: 382 AKSVLWDNDIGSLEAGKK 399
AK+VLWDN+IGSLE GKK
Sbjct: 369 AKAVLWDNEIGSLEVGKK 386
|
Source: Zea mays Species: Zea mays Genus: Zea Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|115488528|ref|NP_001066751.1| Os12g0468600 [Oryza sativa Japonica Group] gi|77555621|gb|ABA98417.1| Amidohydrolase family protein, expressed [Oryza sativa Japonica Group] gi|108862664|gb|ABG22018.1| Amidohydrolase family protein, expressed [Oryza sativa Japonica Group] gi|113649258|dbj|BAF29770.1| Os12g0468600 [Oryza sativa Japonica Group] gi|215686380|dbj|BAG87641.1| unnamed protein product [Oryza sativa Japonica Group] gi|215713483|dbj|BAG94620.1| unnamed protein product [Oryza sativa Japonica Group] gi|222617055|gb|EEE53187.1| hypothetical protein OsJ_36050 [Oryza sativa Japonica Group] | Back alignment and taxonomy information |
|---|
Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust.
Identities = 281/378 (74%), Positives = 327/378 (86%), Gaps = 1/378 (0%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
+LH V+V+MD RVF++G V V DRI A+G SAD+L F A +DL +ILLPG
Sbjct: 13 VLHGGVVVSMDGGFRVFQDGAVAVAGDRIAAVGPSADVLSSFPGAA-ATVDLAGRILLPG 71
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
FVNTHVHTSQQLA+GIADDVDLM WLH RIWPYES+MTEEDSY STLLCGIELI SGVTC
Sbjct: 72 FVNTHVHTSQQLARGIADDVDLMAWLHGRIWPYESHMTEEDSYASTLLCGIELIRSGVTC 131
Query: 142 FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
FAEAGGQ+VSEMA+AVELLGLRACL +S MDCG+GLP +W+ +TDDCIQSQK+LY KHH
Sbjct: 132 FAEAGGQYVSEMARAVELLGLRACLTKSIMDCGDGLPPNWSSCSTDDCIQSQKDLYEKHH 191
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ ADGRIRIWFG+RQIMNATDRLLLETRD A++ TGIHMH+AEIPYEN++VM T+ +DH
Sbjct: 192 NTADGRIRIWFGLRQIMNATDRLLLETRDAAQKLNTGIHMHIAEIPYENELVMQTKGIDH 251
Query: 262 GTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLH 321
GTVT+L+KI+FL++NLL+AH+VW+N EIG +A VKVSHCPASAMRMLGFAPI+EML
Sbjct: 252 GTVTYLEKIDFLRSNLLAAHSVWLNKPEIGHFLKADVKVSHCPASAMRMLGFAPIREMLD 311
Query: 322 ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381
+ +CVSLGTDGAPSNNRMSIVDEMYLA LINKGRE + GTT+P ALPAETVL+MATING
Sbjct: 312 SGVCVSLGTDGAPSNNRMSIVDEMYLACLINKGREAYITGTTNPTALPAETVLKMATING 371
Query: 382 AKSVLWDNDIGSLEAGKK 399
AK+VLWD++IGSLE GKK
Sbjct: 372 AKAVLWDDEIGSLEVGKK 389
|
Source: Oryza sativa Japonica Group Species: Oryza sativa Genus: Oryza Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|168021897|ref|XP_001763477.1| predicted protein [Physcomitrella patens subsp. patens] gi|162685270|gb|EDQ71666.1| predicted protein [Physcomitrella patens subsp. patens] | Back alignment and taxonomy information |
|---|
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 261/376 (69%), Positives = 315/376 (83%), Gaps = 1/376 (0%)
Query: 25 NAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFV 83
N I+TMDKE RVF+N G VV D+I AIG++ +IL+ + AD I+DL S+ +LPG
Sbjct: 103 NGNILTMDKEMRVFQNNGAMVVLGDKIAAIGKTEEILRAYKSEADAIVDLSSKWVLPGMT 162
Query: 84 NTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA 143
NTHVHTSQQLA+GIADDVDL+TWLH RIWPYESNMTEE+SY STLLCGIELIHSGVTCFA
Sbjct: 163 NTHVHTSQQLARGIADDVDLLTWLHGRIWPYESNMTEEESYWSTLLCGIELIHSGVTCFA 222
Query: 144 EAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHA 203
EAGGQHVS MA+AVE LG+RACL +STMDCGEGLP +WA TT+ C+Q+Q+EL+ K + +
Sbjct: 223 EAGGQHVSAMARAVEELGIRACLTRSTMDCGEGLPPTWASETTESCLQTQEELFEKFNGS 282
Query: 204 ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 263
A+GRIR+WFG+RQI+NATD LLL T+ A + KTGIHMHVAEIP+EN+ V TR+VDHGT
Sbjct: 283 AEGRIRVWFGLRQILNATDSLLLSTKAAADKHKTGIHMHVAEIPFENEWVTKTREVDHGT 342
Query: 264 VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD 323
VT L+ I L NLL+AH+VWV+ +E+ ++++ VKVSHCPA+AMRMLGFAPI EM A
Sbjct: 343 VTHLENIGVLGENLLAAHSVWVSSSEVKMMAKRDVKVSHCPAAAMRMLGFAPIVEMQEAG 402
Query: 324 ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAK 383
ICVSLGTDGAPSNNRMS+VDEMYLASLINKGR+ + G TDP ALP ET+L+MATINGAK
Sbjct: 403 ICVSLGTDGAPSNNRMSLVDEMYLASLINKGRQAYEKGMTDPTALPVETILQMATINGAK 462
Query: 384 SVLWDNDIGSLEAGKK 399
+VLW+++IGSLE GKK
Sbjct: 463 AVLWESEIGSLEVGKK 478
|
Source: Physcomitrella patens subsp. patens Species: Physcomitrella patens Genus: Physcomitrella Family: Funariaceae Order: Funariales Class: Bryopsida Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302824689|ref|XP_002993985.1| hypothetical protein SELMODRAFT_431949 [Selaginella moellendorffii] gi|300138147|gb|EFJ04925.1| hypothetical protein SELMODRAFT_431949 [Selaginella moellendorffii] | Back alignment and taxonomy information |
|---|
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 251/378 (66%), Positives = 311/378 (82%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
+LH A++VTMD + V+ GG+ + DRI A+G+ IL F+ AD I+DL ++++PG
Sbjct: 13 VLHGAIVVTMDGDRNVYACGGLAMRGDRIIAVGEDQAILADFASGADDIVDLSGRLIIPG 72
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
+NTHVHTSQQL +GIADDVDL+TWLH RIWPYES+MT+ DS++STLLCGIELI SGVTC
Sbjct: 73 LINTHVHTSQQLGRGIADDVDLLTWLHKRIWPYESSMTDSDSFLSTLLCGIELIRSGVTC 132
Query: 142 FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
FAEAGGQHV MA+AVELLG+RACL +STMD GEGLP+SWA TTD C+ +Q+ELY +
Sbjct: 133 FAEAGGQHVPAMARAVELLGIRACLTRSTMDSGEGLPSSWATETTDSCLTAQEELYKSLN 192
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+A GRIR+WFG+RQIMNATD LLL T++ A ++ TGIHMHV+EIPYEN+ V+ TR V++
Sbjct: 193 GSAGGRIRVWFGLRQIMNATDALLLRTKEAADKYNTGIHMHVSEIPYENEYVIKTRGVEN 252
Query: 262 GTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLH 321
GTVT LD+I L NLL+AH+VW+N E+ +++++GVKVSHCPASAMRMLGF P++EML
Sbjct: 253 GTVTHLDRIGVLGENLLAAHSVWINEGEVKMMAKSGVKVSHCPASAMRMLGFCPVQEMLE 312
Query: 322 ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381
+CVS+GTDGAPSNNRMS+VDEMYLASLINKG+ GTTDP ALPAETVL MATING
Sbjct: 313 QGVCVSIGTDGAPSNNRMSMVDEMYLASLINKGKLAHTRGTTDPTALPAETVLEMATING 372
Query: 382 AKSVLWDNDIGSLEAGKK 399
AKSVLWDN+IGS+E KK
Sbjct: 373 AKSVLWDNEIGSIEVHKK 390
|
Source: Selaginella moellendorffii Species: Selaginella moellendorffii Genus: Selaginella Family: Selaginellaceae Order: Selaginellales Class: Isoetopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 400 | ||||||
| ASPGD|ASPL0000035211 | 464 | AN3194 [Emericella nidulans (t | 0.92 | 0.793 | 0.350 | 4.5e-59 | |
| TIGR_CMR|CHY_0698 | 444 | CHY_0698 "amidohydrolase famil | 0.905 | 0.815 | 0.334 | 3.1e-51 | |
| POMBASE|SPAC1F8.04c | 463 | SPAC1F8.04c "hydrolase (predic | 0.917 | 0.792 | 0.321 | 2.5e-49 | |
| UNIPROTKB|Q48FM5 | 443 | PSPPH_3669 "Hydrolase, Atz/Trz | 0.892 | 0.805 | 0.321 | 1.7e-41 | |
| UNIPROTKB|Q81S14 | 435 | mtaD "5-methylthioadenosine/S- | 0.88 | 0.809 | 0.318 | 5.9e-41 | |
| TIGR_CMR|BA_1865 | 435 | BA_1865 "chlorohydrolase famil | 0.88 | 0.809 | 0.318 | 5.9e-41 | |
| TIGR_CMR|CBU_0521 | 484 | CBU_0521 "chlorohydrolase fami | 0.862 | 0.712 | 0.299 | 1.8e-39 | |
| DICTYBASE|DDB_G0285467 | 482 | DDB_G0285467 "putative amidohy | 0.82 | 0.680 | 0.299 | 2.4e-37 | |
| TIGR_CMR|CHY_1438 | 433 | CHY_1438 "amidohydrolase famil | 0.85 | 0.785 | 0.304 | 5.7e-36 | |
| TIGR_CMR|SPO_2957 | 444 | SPO_2957 "hydroxydechloroatraz | 0.9 | 0.810 | 0.258 | 6e-23 |
| ASPGD|ASPL0000035211 AN3194 [Emericella nidulans (taxid:162425)] | Back alignment and assigned GO terms |
|---|
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 137/391 (35%), Positives = 223/391 (57%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQ--DRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
M+ +A I+T+D R+ +G ++V + +RI ++G++A +L Q+ ++ DL +I+
Sbjct: 1 MLFTHATILTLDSTRRIITDGAIYVPRGSNRISSLGKTAALLAQYPD--EEKYDLTGRIV 58
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
+PG V+TH+HT+Q L +G ADD++L++WL +RIW + N T++D Y + L E++ SG
Sbjct: 59 IPGLVSTHMHTAQTLLRGTADDLELVSWLCERIWVLQGNFTKDDGYAAARLSIAEMLKSG 118
Query: 139 VTCFAEA--GGQHVSE-MAKAVELLGLRACLVQSTMDCGE-GLPASWA-----VRTTDDC 189
TCF E+ ++ E + +AV G+R CL + MD G +WA + +
Sbjct: 119 TTCFLESMFADRYGFEGLCQAVAESGIRGCLGKIVMDKGTYAADDAWAMHPGLIEDRETS 178
Query: 190 IQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249
+ +++ K + AD RIR+WFG R +D L E ++RE I MH AE+ +
Sbjct: 179 LLGTVKMWEKWNGKADDRIRVWFGARTPGGVSDELYREMTAISREKNIPITMHCAEVKAD 238
Query: 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 309
V H +T+ + L + + H V ++ +I LLS +G V+HCP S +
Sbjct: 239 RAFF---GSVGHTPMTYCSSVGLLSPSTVLVHMVHLDDRDISLLSESGTHVAHCPTSNAK 295
Query: 310 ML-GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAAL 368
+ G + ++ A + + LGTDGAP NN ++ EM LA++I+KG + DP +
Sbjct: 296 LASGTCRVPDLQTAGVNIGLGTDGAPCNNTCDLLQEMKLAAIIHKG------ASYDPTVV 349
Query: 369 PAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
AE+VL MATINGAK++ D++IGSLE GKK
Sbjct: 350 SAESVLEMATINGAKALGLDSEIGSLEVGKK 380
|
|
| TIGR_CMR|CHY_0698 CHY_0698 "amidohydrolase family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
Identities = 128/383 (33%), Positives = 210/383 (54%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
++++ N IVTM+++ + + G +++ + IK IG S D+ D++ID ++++
Sbjct: 2 SILIKNGTIVTMNEKREILK-GDLYIEGNIIKDIGPSLDV------QTDKVIDAAGKVVI 54
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGI-ELIHSG 138
PG + TH+H Q L +G ADD++L+ WL RIWP E E Y S +L GI EL G
Sbjct: 55 PGLIQTHIHLCQTLFRGQADDLELLDWLKLRIWPLEGGHDPESLYYSAML-GIGELFKGG 113
Query: 139 VTCFAE-AGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197
T + A H +A+ G+RA + MD G +P S TT++ I +L
Sbjct: 114 TTAIVDMATVNHTDSNFQAIYDSGIRAISGKCMMDYGTEVPKSMQ-DTTENAIDESVQLL 172
Query: 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257
K H +GRI F R ++ T+ LL E +A ++K +H H +E E ++V+ R
Sbjct: 173 EKWHGKDNGRILYAFTPRFAVSCTEDLLKEVVKLAEQYKVRVHTHASENKGEVELVLKER 232
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPI 316
+ + V +L+K+ NL+ AH + ++ E+ +L+ + K++HCP+S +++ G A I
Sbjct: 233 GMRN--VLYLEKLGMTAPNLILAHCIHLDEREMKVLAESKTKIAHCPSSNLKLASGIAKI 290
Query: 317 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376
E+L +S+ DGAP NN + EM +A+LI K F P ++PA+ V +
Sbjct: 291 PELLEMGAEISIAADGAPCNNNLDAFIEMRMAALIQKP---FYG----PTSMPAQKVFEL 343
Query: 377 ATINGAKSVLWDNDIGSLEAGKK 399
ATI GA+++ ++ IGSLE GKK
Sbjct: 344 ATIGGARAMGLEDQIGSLEVGKK 366
|
|
| POMBASE|SPAC1F8.04c SPAC1F8.04c "hydrolase (predicted)" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 126/392 (32%), Positives = 206/392 (52%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQ--DRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
M+ +A I+T++ + +G + V + I IG++ ++ + + L+ I+
Sbjct: 1 MLYTHANIITVNPTRDILIDGAILVKDGSNTIDDIGKTDRLVSIYPNEKHK--SLEGHIV 58
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
+PG ++ HVH +Q L + ADD+ L++WL D +W + N T+ED Y+++ L E++ SG
Sbjct: 59 MPGLISLHVHLAQSLLRSAADDLPLISWLCDTVWKMQGNFTQEDGYVASQLTIAEMLKSG 118
Query: 139 VTCFAEA-GGQH--VSEMAKAVELLGLRACLVQSTMD-----CGEGLPASWAVRTTDDCI 190
T F EA Q + KAV G+R C+ + MD G+ + + +
Sbjct: 119 TTTFVEALFAQRYGIEGAVKAVIESGIRGCIGKVVMDQPRYATQTGVSMHEGLIENSNSL 178
Query: 191 QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250
E ++K H +GR+ IWFG R ++ L + +AR GI MH AE+ +
Sbjct: 179 NQAVESHSKFHGKGNGRVEIWFGARTPGGVSEELYRKMVKIARANNIGITMHCAEVKADR 238
Query: 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG--VKVSHCPASAM 308
+ +H +T+ + L + AH V ++ ++ +L + G V+HCP S
Sbjct: 239 EFFASK---EHTPMTYCKDLGLLGPKTVLAHMVHLDTQDLEILEKHGNGTSVAHCPVSNS 295
Query: 309 RM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAA 367
++ G AP+KEML I V +G DG P NN M ++ EM +ASL+ K +G DP+
Sbjct: 296 KLGSGIAPLKEMLEKSIIVGIGCDGCPCNNTMDLLQEMKMASLLPKA----LHG--DPSI 349
Query: 368 LPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
+PAE ++ MATINGAK+ L +D+GSLE GKK
Sbjct: 350 VPAEKIVEMATINGAKA-LGRDDLGSLEVGKK 380
|
|
| UNIPROTKB|Q48FM5 PSPPH_3669 "Hydrolase, Atz/Trz family" [Pseudomonas syringae pv. phaseolicola 1448A (taxid:264730)] | Back alignment and assigned GO terms |
|---|
Score = 440 (159.9 bits), Expect = 1.7e-41, P = 1.7e-41
Identities = 123/382 (32%), Positives = 193/382 (50%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++L A +V ++ V ++ G+ V I IG + L+Q A Q+ +L +L P
Sbjct: 10 LLLLPAWLVPVEPAGVVLKDHGIGVRDGCIVYIGPRTEALRQ---NAVQVQELPGMLLSP 66
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYI--STLLCGIELIHSG 138
G +N H H + L +G+ADD+ LMTWL D IWP E ED ++ T L E + G
Sbjct: 67 GLINAHGHAAMTLFRGLADDLPLMTWLQDHIWPAEGKWVNED-FVRDGTDLAIAEQLKGG 125
Query: 139 VTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198
+TCF++ + A+ V G+RA + +D P A TTD+ + + EL+
Sbjct: 126 ITCFSDMYF-YPKVAAERVHASGMRAQITVPVLD----FPIPGA-HTTDEALHNGIELFN 179
Query: 199 K-HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257
HH RI+I FG D L + R +A E I MHV E +E + ++ R
Sbjct: 180 DLAHHP---RIKIAFGPHAPYTVGDENLEKVRVIADELDAMIQMHVHETAFEVEQAVEQR 236
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPI 316
+ + L+++ L + H +N ++ LL + V HCP S +++ GF P+
Sbjct: 237 Q--ERPLARLNRLGMLGPRFQAVHMTQINDDDLALLVESNTNVIHCPESNLKLASGFCPV 294
Query: 317 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376
+ + A + V++GTDGA SNN + ++ E A+L+ K V + T AL A LRM
Sbjct: 295 ERLWQAGVNVAVGTDGAASNNDLDLLGETRTAALLAKA--VAGSAT----ALDAHRALRM 348
Query: 377 ATINGAKSVLWDNDIGSLEAGK 398
AT+NGA+++ + GSLE GK
Sbjct: 349 ATLNGARALGIQAETGSLEIGK 370
|
|
| UNIPROTKB|Q81S14 mtaD "5-methylthioadenosine/S-adenosylhomocysteine deaminase" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 121/380 (31%), Positives = 185/380 (48%)
Query: 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVN 84
NA IVTM++++ V NG + V D+I + S + F D++ID++ + +LPG VN
Sbjct: 7 NATIVTMNEQNEVIENGYIIVENDKIIDVN-SGEFASDFE--VDEVIDMKGKWVLPGLVN 63
Query: 85 THVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE 144
TH H L +GI DD+ L WL RIWP ES T E + ST L +E++ SG T F++
Sbjct: 64 THTHVVMSLLRGIGDDMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSD 123
Query: 145 AG---GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
G + + V G+RA + ++ G A+ + E Y K +
Sbjct: 124 MFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGTQEDEKKAIE--------EAEKYVKRY 175
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ G + + LL E +A E +T +H+H++E E V D + +
Sbjct: 176 YNESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETERE---VRDI-EAQY 231
Query: 262 GT--VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKE 318
G V ++ + + AH V +N E L+ V+V+H P S +++ G A +K
Sbjct: 232 GKRPVEYVASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNLKLGSGIANVKA 291
Query: 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378
ML A + V + TD SNN + + +EM +A+L+ KG D ALP ET L +AT
Sbjct: 292 MLEAGMKVGIATDSVASNNNLDMFEEMRIATLLQKGIH------QDATALPVETALTLAT 345
Query: 379 INGAKSVLWDNDIGSLEAGK 398
GA V+ GSLE GK
Sbjct: 346 -KGAAEVIGMKQTGSLEVGK 364
|
|
| TIGR_CMR|BA_1865 BA_1865 "chlorohydrolase family protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 435 (158.2 bits), Expect = 5.9e-41, P = 5.9e-41
Identities = 121/380 (31%), Positives = 185/380 (48%)
Query: 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVN 84
NA IVTM++++ V NG + V D+I + S + F D++ID++ + +LPG VN
Sbjct: 7 NATIVTMNEQNEVIENGYIIVENDKIIDVN-SGEFASDFE--VDEVIDMKGKWVLPGLVN 63
Query: 85 THVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE 144
TH H L +GI DD+ L WL RIWP ES T E + ST L +E++ SG T F++
Sbjct: 64 THTHVVMSLLRGIGDDMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSD 123
Query: 145 AG---GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
G + + V G+RA + ++ G A+ + E Y K +
Sbjct: 124 MFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGTQEDEKKAIE--------EAEKYVKRY 175
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ G + + LL E +A E +T +H+H++E E V D + +
Sbjct: 176 YNESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETERE---VRDI-EAQY 231
Query: 262 GT--VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKE 318
G V ++ + + AH V +N E L+ V+V+H P S +++ G A +K
Sbjct: 232 GKRPVEYVASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNLKLGSGIANVKA 291
Query: 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378
ML A + V + TD SNN + + +EM +A+L+ KG D ALP ET L +AT
Sbjct: 292 MLEAGMKVGIATDSVASNNNLDMFEEMRIATLLQKGIH------QDATALPVETALTLAT 345
Query: 379 INGAKSVLWDNDIGSLEAGK 398
GA V+ GSLE GK
Sbjct: 346 -KGAAEVIGMKQTGSLEVGK 364
|
|
| TIGR_CMR|CBU_0521 CBU_0521 "chlorohydrolase family protein" [Coxiella burnetii RSA 493 (taxid:227377)] | Back alignment and assigned GO terms |
|---|
Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
Identities = 110/367 (29%), Positives = 180/367 (49%)
Query: 35 SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94
+++ N + V + I + A+ ++++ ADQ ++L ++LPG VN H HT L
Sbjct: 53 NQILENFALAVRDEYIVDLLPQAEANKKYT--ADQHLELNDHVVLPGLVNAHTHTPMNLF 110
Query: 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSY-ISTLLCGIELIHSGVTCFAEAGGQHVSEM 153
+G+ADD+ L+ WL + IWP E + +S T L E++ G TCF + H +
Sbjct: 111 RGLADDLQLLDWLQNHIWPAEKALINAESVRAGTRLAIAEMLRGGTTCFNDHYFFH-DTI 169
Query: 154 AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW-F 212
AKA G+RA + M +P WA ++Q+ L +H+ + W
Sbjct: 170 AKAASEAGMRALIGVVIMS----VPTEWASDEKAYLARAQETLEKAENHS----LITWAL 221
Query: 213 GIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEF 272
+D E + +A + IH+H+ E E + + + L +
Sbjct: 222 APHAPYTVSDTAFKEIKKLAEYYDLPIHIHLHETKVE--IEQGLKSYGKRPLAHLHDLGL 279
Query: 273 LQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIKEMLHADICVSLGTD 331
L L++ H + EI L++ + HCP S +++ G API +++ A + V++GTD
Sbjct: 280 LSQRLIAVHMTQLTSEEIKLVADTQTNIVHCPESNLKLSSGIAPIAKLVDAGVNVAIGTD 339
Query: 332 GAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391
GA SNN + + EM AS K +G DP LPA +L+MAT+NGAK++ ++ I
Sbjct: 340 GAASNNDLDLFGEMRTASFTAK-----VSGL-DPTHLPAPEILKMATLNGAKALGLEDKI 393
Query: 392 GSLEAGK 398
GSLE GK
Sbjct: 394 GSLEPGK 400
|
|
| DICTYBASE|DDB_G0285467 DDB_G0285467 "putative amidohydrolase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 104/347 (29%), Positives = 183/347 (52%)
Query: 58 DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYES- 116
D+ + S + I IL PGF+N H H++ L +G ADDV L WL IWP E+
Sbjct: 72 DLKEMNSDTSSSISSTSEYILAPGFINMHTHSAMSLLRGYADDVSLHDWLTKFIWPAEAQ 131
Query: 117 NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEM-AKAVELLGLRACLVQSTMDCGE 175
++ EE + T L +E+I +G TC + + E+ A+ VE G+RA L +
Sbjct: 132 HVGEEFVKVGTELACLEMIKTGTTCCNDM--YYYPEVSAQVVEQFGMRATLAAPIIK--- 186
Query: 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235
P +A ++ + I+ +L K+ + +I+I G + TD L+ ++++ ++
Sbjct: 187 -FPTVYA-QSEQEYIEKGIQLIEKYKDHS--KIKISLGPHAVYTITDEAYLKVKELSEKY 242
Query: 236 KTGIHMHVAEIPYENQVVMDTRKVD-HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLS 294
IH H+ E +E V + KV + L + L ++L++AH + ++ L +
Sbjct: 243 GVKIHTHLHETTHE---VSEEVKVSGKRPIERLRDLGVLSSSLIAAHMTQLTSEDLDLTA 299
Query: 295 RAGVKVSHCPASAMRM--LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLIN 352
++G+ V HCP S +++ G +P+ ++L + VS+GTD A SN+ + ++ E+ A+ I+
Sbjct: 300 KSGINVVHCPESNLKLGVKGISPVHKLLKQGVNVSVGTDSAASNDDLDMLGELRTAAYID 359
Query: 353 K-GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398
K + +P P+ +L MATINGAK++ D+ +GSL+ GK
Sbjct: 360 KLSANTHSIEGGEPVT-PSYKILSMATINGAKALGIDDKVGSLQIGK 405
|
|
| TIGR_CMR|CHY_1438 CHY_1438 "amidohydrolase family protein" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)] | Back alignment and assigned GO terms |
|---|
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 113/371 (30%), Positives = 188/371 (50%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
T+++ N ++ ++K + V + + ++I IG ++ + + +IID +++ L
Sbjct: 6 TILIKNTTVLDLNKFAAV--ENDILIEGNKISKIGVDIEVNDKENL---KIIDGSNKVAL 60
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PG +N H H + L +G +DD+ LM WL++ IWP ES +T ED Y +LL +E+I SG
Sbjct: 61 PGLINGHTHVAMTLFRGASDDLPLMDWLNNVIWPSESRLTGEDVYWGSLLGIVEMIKSGT 120
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQS--TMDCGEGLPASWAVRTTDDCIQSQKELY 197
T F + + E+A AVE G+RA L + +D G ++ + D I+
Sbjct: 121 TTFCDMYF-FMDEVAHAVEQSGIRAILSRGMVALDPENG---EKGLKESIDFIE------ 170
Query: 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257
K A+GRI L + A+ I++H++E E ++
Sbjct: 171 -KWQGKANGRITTALAPHAPYTCPPEFLKDVIWEAKRLNVPINIHISETLDEISII---- 225
Query: 258 KVDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFA 314
K +GT V L+ + + + AH V V+ EI +L R V H P S M++ G A
Sbjct: 226 KERYGTTPVRHLESLGLFEVKTIGAHLVHVDDEEIQILKRYQVGAIHNPQSNMKLASGIA 285
Query: 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374
P+ +ML A + V LGTDGA SNN + +++E+ AS + K + +P AL A+T +
Sbjct: 286 PVAKMLEAGVLVGLGTDGAASNNDLDMIEELRAASYLQKVSSM------NPEALNAKTSI 339
Query: 375 RMATINGAKSV 385
MAT GA+++
Sbjct: 340 AMATSLGARAL 350
|
|
| TIGR_CMR|SPO_2957 SPO_2957 "hydroxydechloroatrazine ethylaminohydrolase, putative" [Ruegeria pomeroyi DSS-3 (taxid:246200)] | Back alignment and assigned GO terms |
|---|
Score = 277 (102.6 bits), Expect = 6.0e-23, P = 6.0e-23
Identities = 101/391 (25%), Positives = 168/391 (42%)
Query: 22 ILHNA-VIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++ NA I+TMD R + + + AIG + L ++ + + ++ P
Sbjct: 5 LIRNADTILTMDAGRRELAGADILIRDGIVAAIGPNLATL-------GEVHEARGCVVTP 57
Query: 81 GFVNTHVHTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
G VNTH H Q L + + D L WL ++P + E+ ++S EL SG
Sbjct: 58 GLVNTHHHLYQSLTRAVPGGQDALLFGWLKT-LYPIWARFGPEEMFVSAQTGLAELALSG 116
Query: 139 VTCFAE-----AGGQHVSEMAKAVELLGLRACLVQSTMDCGE---GLPASWAVRTTDDCI 190
T ++ G + + A LGLR + M GE GLP V +
Sbjct: 117 CTLSSDHLYLYPNGARLDDTIAAATELGLRFHPTRGAMSIGESAGGLPPDTLVEGEAAIL 176
Query: 191 QSQKELYAKHHHAADGRI-RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249
+ H A +G + R+ + + L+ + +AR+ +H H+AE +
Sbjct: 177 DDMIRVVDAFHDAGEGSMCRVGLAPCSPFSVSRDLMRDAALLARDKGVMLHTHLAE--ND 234
Query: 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 309
+ + + + + + ++ AH V ++ EI L +R+ V+HCP S R
Sbjct: 235 EDIAYSLAQFGCRPGQYAEDLGWTGPDVWHAHCVKLDGQEIDLFARSRTGVAHCPCSNCR 294
Query: 310 M-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAAL 368
+ G AP++ M A + V LG DG+ SN+ +++ E A L+ + A G A+
Sbjct: 295 LGSGIAPVRAMRDAGVSVGLGVDGSASNDSGNLMGEARQAMLLQR----VARGAD---AM 347
Query: 369 PAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
A L +AT GA VL D G LE GK+
Sbjct: 348 SAREALEIATRGGA-DVLGRPDCGRLELGKR 377
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| B5YLB7 | MTAD_THEYD | 3, ., 5, ., 4, ., 3, 1 | 0.3133 | 0.9125 | 0.8314 | yes | no |
| B7IS56 | MTAD_BACC2 | 3, ., 5, ., 4, ., 3, 1 | 0.3184 | 0.88 | 0.8091 | yes | no |
| Q2LTB7 | MTAD1_SYNAS | 3, ., 5, ., 4, ., 3, 1 | 0.3167 | 0.9025 | 0.8148 | yes | no |
| Q0AYV2 | MTAD_SYNWW | 3, ., 5, ., 4, ., 3, 1 | 0.3543 | 0.8925 | 0.8283 | yes | no |
| B0K2W0 | MTAD_THEPX | 3, ., 5, ., 4, ., 3, 1 | 0.3385 | 0.8925 | 0.8283 | yes | no |
| Q6HK87 | MTAD_BACHK | 3, ., 5, ., 4, ., 3, 1 | 0.3148 | 0.885 | 0.8137 | yes | no |
| A3DEQ2 | MTAD_CLOTH | 3, ., 5, ., 4, ., 3, 1 | 0.3149 | 0.9 | 0.8352 | yes | no |
| Q466Q9 | MTAD_METBF | 3, ., 5, ., 4, ., 3, 1 | 0.3605 | 0.8875 | 0.8217 | yes | no |
| A5D1G6 | MTAD_PELTS | 3, ., 5, ., 4, ., 3, 1 | 0.3489 | 0.895 | 0.8267 | yes | no |
| C1EPN0 | MTAD_BACC3 | 3, ., 5, ., 4, ., 3, 1 | 0.3148 | 0.885 | 0.8137 | yes | no |
| Q63CU1 | MTAD_BACCZ | 3, ., 5, ., 4, ., 3, 1 | 0.3148 | 0.885 | 0.8137 | yes | no |
| B0K8R8 | MTAD_THEP3 | 3, ., 5, ., 4, ., 3, 1 | 0.3385 | 0.8925 | 0.8283 | yes | no |
| Q8TYD4 | MTAD_METKA | 3, ., 5, ., 4, ., 3, 1 | 0.3159 | 0.8625 | 0.8004 | yes | no |
| O31352 | MTAD_BACC1 | 3, ., 5, ., 4, ., 3, 1 | 0.3184 | 0.88 | 0.8091 | yes | no |
| Q8PUQ3 | MTAD_METMA | 3, ., 5, ., 4, ., 3, 1 | 0.3605 | 0.8875 | 0.8217 | yes | no |
| Q8TRA4 | MTAD_METAC | 3, ., 5, ., 4, ., 3, 1 | 0.3507 | 0.8825 | 0.8171 | yes | no |
| Q81F14 | MTAD_BACCR | 3, ., 5, ., 4, ., 3, 1 | 0.3210 | 0.88 | 0.8091 | yes | no |
| B8FRL9 | MTAD_DESHD | 3, ., 5, ., 4, ., 3, 1 | 0.3113 | 0.89 | 0.8259 | yes | no |
| Q24UA2 | MTAD_DESHY | 3, ., 5, ., 4, ., 3, 1 | 0.3113 | 0.89 | 0.8259 | yes | no |
| B7JJI0 | MTAD_BACC0 | 3, ., 5, ., 4, ., 3, 1 | 0.3148 | 0.885 | 0.8137 | yes | no |
| C3P768 | MTAD_BACAA | 3, ., 5, ., 4, ., 3, 1 | 0.3148 | 0.885 | 0.8137 | yes | no |
| B8CX03 | MTAD_HALOH | 3, ., 5, ., 4, ., 3, 1 | 0.3091 | 0.875 | 0.8120 | yes | no |
| C3L6N3 | MTAD_BACAC | 3, ., 5, ., 4, ., 3, 1 | 0.3148 | 0.885 | 0.8137 | yes | no |
| A5UMN6 | MTAD_METS3 | 3, ., 5, ., 4, ., 3, 1 | 0.3834 | 0.895 | 0.8229 | yes | no |
| B8J2Q8 | MTAD_DESDA | 3, ., 5, ., 4, ., 3, 1 | 0.3263 | 0.89 | 0.8090 | yes | no |
| Q81S14 | MTAD_BACAN | 3, ., 5, ., 4, ., 3, 1 | 0.3148 | 0.885 | 0.8137 | yes | no |
| B8E183 | MTAD_DICTD | 3, ., 5, ., 4, ., 3, 1 | 0.3109 | 0.865 | 0.8122 | yes | no |
| A0LMI3 | MTAD_SYNFM | 3, ., 5, ., 4, ., 3, 1 | 0.3179 | 0.905 | 0.8264 | yes | no |
| A0RCM7 | MTAD_BACAH | 3, ., 5, ., 4, ., 3, 1 | 0.3148 | 0.885 | 0.8137 | yes | no |
| B7HMN9 | MTAD_BACC7 | 3, ., 5, ., 4, ., 3, 1 | 0.3201 | 0.885 | 0.8137 | yes | no |
| Q2NHL6 | MTAD_METST | 3, ., 5, ., 4, ., 3, 1 | 0.3177 | 0.885 | 0.8329 | yes | no |
| Q8R9L4 | MTAD_THETN | 3, ., 5, ., 4, ., 3, 1 | 0.3078 | 0.8925 | 0.8244 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 400 | |||
| cd01298 | 411 | cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enz | 1e-127 | |
| PRK07228 | 445 | PRK07228, PRK07228, N-ethylammeline chlorohydrolas | 1e-98 | |
| PRK06038 | 430 | PRK06038, PRK06038, N-ethylammeline chlorohydrolas | 1e-81 | |
| PRK09045 | 443 | PRK09045, PRK09045, N-ethylammeline chlorohydrolas | 7e-73 | |
| COG0402 | 421 | COG0402, SsnA, Cytosine deaminase and related meta | 4e-70 | |
| PRK08393 | 424 | PRK08393, PRK08393, N-ethylammeline chlorohydrolas | 3e-67 | |
| PRK06380 | 418 | PRK06380, PRK06380, metal-dependent hydrolase; Pro | 2e-61 | |
| PRK08203 | 451 | PRK08203, PRK08203, hydroxydechloroatrazine ethyla | 4e-57 | |
| PRK06687 | 419 | PRK06687, PRK06687, chlorohydrolase; Validated | 4e-50 | |
| PRK15493 | 435 | PRK15493, PRK15493, 5-methylthioadenosine/S-adenos | 1e-48 | |
| PRK07203 | 442 | PRK07203, PRK07203, putative chlorohydrolase/amino | 1e-37 | |
| PRK12393 | 457 | PRK12393, PRK12393, amidohydrolase; Provisional | 2e-35 | |
| TIGR03314 | 441 | TIGR03314, Se_ssnA, putative selenium metabolism p | 2e-34 | |
| cd01303 | 429 | cd01303, GDEase, Guanine deaminase (GDEase) | 1e-28 | |
| PRK08204 | 449 | PRK08204, PRK08204, hypothetical protein; Provisio | 8e-28 | |
| TIGR02967 | 401 | TIGR02967, guan_deamin, guanine deaminase | 1e-25 | |
| PRK06151 | 488 | PRK06151, PRK06151, N-ethylammeline chlorohydrolas | 2e-18 | |
| cd01312 | 381 | cd01312, Met_dep_hydrolase_D, Metallo-dependent hy | 5e-17 | |
| cd01292 | 275 | cd01292, metallo-dependent_hydrolases, Superfamily | 8e-17 | |
| cd01313 | 418 | cd01313, Met_dep_hydrolase_E, Metallo-dependent hy | 5e-15 | |
| PRK09228 | 433 | PRK09228, PRK09228, guanine deaminase; Provisional | 9e-14 | |
| pfam01979 | 307 | pfam01979, Amidohydro_1, Amidohydrolase family | 1e-12 | |
| PRK08418 | 408 | PRK08418, PRK08418, chlorohydrolase; Provisional | 4e-12 | |
| COG1228 | 406 | COG1228, HutI, Imidazolonepropionase and related a | 3e-10 | |
| cd01305 | 263 | cd01305, archeal_chlorohydrolases, Predicted chlor | 8e-10 | |
| pfam13147 | 304 | pfam13147, Amidohydro_4, Amidohydrolase | 7e-09 | |
| COG1574 | 535 | COG1574, COG1574, Predicted metal-dependent hydrol | 8e-09 | |
| PRK09356 | 406 | PRK09356, PRK09356, imidazolonepropionase; Validat | 6e-08 | |
| PRK07213 | 375 | PRK07213, PRK07213, chlorohydrolase; Provisional | 1e-06 | |
| cd01300 | 479 | cd01300, YtcJ_like, YtcJ_like metal dependent amid | 2e-06 | |
| pfam13594 | 66 | pfam13594, Amidohydro_5, Amidohydrolase | 2e-06 | |
| TIGR02022 | 454 | TIGR02022, hutF, formiminoglutamate deiminase | 3e-06 | |
| cd00854 | 374 | cd00854, NagA, N-acetylglucosamine-6-phosphate dea | 3e-06 | |
| cd01296 | 371 | cd01296, Imidazolone-5PH, Imidazolonepropionase/im | 1e-05 | |
| cd01300 | 479 | cd01300, YtcJ_like, YtcJ_like metal dependent amid | 2e-05 | |
| COG1574 | 535 | COG1574, COG1574, Predicted metal-dependent hydrol | 4e-05 | |
| PRK08418 | 408 | PRK08418, PRK08418, chlorohydrolase; Provisional | 5e-05 | |
| COG0044 | 430 | COG0044, PyrC, Dihydroorotase and related cyclic a | 8e-05 | |
| COG1820 | 380 | COG1820, NagA, N-acetylglucosamine-6-phosphate dea | 2e-04 | |
| PRK09357 | 423 | PRK09357, pyrC, dihydroorotase; Validated | 3e-04 | |
| PRK09236 | 444 | PRK09236, PRK09236, dihydroorotase; Reviewed | 6e-04 | |
| PRK13404 | 477 | PRK13404, PRK13404, dihydropyrimidinase; Provision | 7e-04 | |
| PRK09356 | 406 | PRK09356, PRK09356, imidazolonepropionase; Validat | 8e-04 | |
| PRK14085 | 382 | PRK14085, PRK14085, imidazolonepropionase; Provisi | 0.001 | |
| PRK15446 | 383 | PRK15446, PRK15446, phosphonate metabolism protein | 0.001 | |
| PRK10657 | 388 | PRK10657, PRK10657, isoaspartyl dipeptidase; Provi | 0.001 | |
| cd01296 | 371 | cd01296, Imidazolone-5PH, Imidazolonepropionase/im | 0.002 | |
| PRK05985 | 391 | PRK05985, PRK05985, cytosine deaminase; Provisiona | 0.002 | |
| TIGR01224 | 377 | TIGR01224, hutI, imidazolonepropionase | 0.002 | |
| TIGR03178 | 443 | TIGR03178, allantoinase, allantoinase | 0.003 |
| >gnl|CDD|238623 cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases | Back alignment and domain information |
|---|
Score = 371 bits (955), Expect = e-127
Identities = 153/382 (40%), Positives = 218/382 (57%), Gaps = 23/382 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N IVT D RV +G V V RI A+G + + AD++ID + ++++P
Sbjct: 1 ILIRNGTIVTTD-PRRVLEDGDVLVEDGRIVAVGPAL---PLPAYPADEVIDAKGKVVMP 56
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G VNTH H + L +G+ADD+ LM WL D IWP E +TEED Y+ LL E+I SG T
Sbjct: 57 GLVNTHTHLAMTLLRGLADDLPLMEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTT 116
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
FA+ + +A+A E LG+RA L + MD G V T++ + + L +
Sbjct: 117 TFADMYFFYPDAVAEAAEELGIRAVLGRGIMDLGTE-----DVEETEEALAEAERLIREW 171
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
H AADGRIR+ +D LL E ++ARE+ +H+H+AE E ++
Sbjct: 172 HGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDE----VEESLEK 227
Query: 261 HG--TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIK 317
+G V +L+++ L +++ AH VW+ EI LL+ G V+H PAS M++ G AP+
Sbjct: 228 YGKRPVEYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHNPASNMKLASGIAPVP 287
Query: 318 EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377
EML A + V LGTDGA SNN + + +EM LA+L+ K DP ALPAE L MA
Sbjct: 288 EMLEAGVNVGLGTDGAASNNNLDMFEEMRLAALLQKLA------HGDPTALPAEEALEMA 341
Query: 378 TINGAKSVLWDNDIGSLEAGKK 399
TI GAK++ D +IGSLE GKK
Sbjct: 342 TIGGAKALGLD-EIGSLEVGKK 362
|
Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD. Length = 411 |
| >gnl|CDD|180895 PRK07228, PRK07228, N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 300 bits (770), Expect = 1e-98
Identities = 140/383 (36%), Positives = 210/383 (54%), Gaps = 17/383 (4%)
Query: 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
T+++ NA IVTM+ R +G V + DRI A+G D+ + D ID +++
Sbjct: 1 MTILIKNAGIVTMN-AKREIVDGDVLIEDDRIAAVGDRLDL-----EDYDDHIDATGKVV 54
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
+PG + H+H Q L +GIADD++L+ WL DRIWP E+ E Y S LL ELI SG
Sbjct: 55 IPGLIQGHIHLCQTLFRGIADDLELLDWLKDRIWPLEAAHDAESMYYSALLGIGELIESG 114
Query: 139 VTCFAEAGGQHVSEMA-KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197
T + H ++ A +A G+RA L + MD G+ +P T+ + L
Sbjct: 115 TTTIVDMESVHHTDSAFEAAGESGIRAVLGKVMMDYGDDVPEGLQ-EDTEASLAESVRLL 173
Query: 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257
K H A +GRIR F R ++ T+ LL RD+A E+ IH H +E E + V +
Sbjct: 174 EKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEEET 233
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPI 316
+ + + +LD++ +L+ AH VW++ E +L+ G V+HCP+S +++ G AP+
Sbjct: 234 GMRN--IHYLDEVGLTGEDLILAHCVWLDEEEREILAETGTHVTHCPSSNLKLASGIAPV 291
Query: 317 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376
++L I V+LG DGAP NN + EM A+LI K + P A+PA TV M
Sbjct: 292 PDLLERGINVALGADGAPCNNTLDPFTEMRQAALIQKVDRL------GPTAMPARTVFEM 345
Query: 377 ATINGAKSVLWDNDIGSLEAGKK 399
AT+ GAK+ ++++IGSLE GKK
Sbjct: 346 ATLGGAKAAGFEDEIGSLEEGKK 368
|
Length = 445 |
| >gnl|CDD|180363 PRK06038, PRK06038, N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 256 bits (656), Expect = 1e-81
Identities = 136/380 (35%), Positives = 207/380 (54%), Gaps = 27/380 (7%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA ++TMD + + G V + I + +S AD +ID + +++P
Sbjct: 4 IIIKNAYVLTMD--AGDLKKGSVVIEDGTITEVSEST------PGDADTVIDAKGSVVMP 55
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G VNTH H + L +G ADD+ L WL+D IWP E+ +T ED Y +LL +E+I SG T
Sbjct: 56 GLVNTHTHAAMTLFRGYADDLPLAEWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTT 115
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
FA+ ++ E+AKAVE GLRA L G+ + ++ K +
Sbjct: 116 SFADM-YFYMDEVAKAVEESGLRAAL-------SYGMIDLGDDEKGEAELKEGKRFVKEW 167
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
H AADGRI++ +G ++ L + + +A + GIH+HV E E ++ +
Sbjct: 168 HGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLET--EAELNQMKEQYG 225
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIKEM 319
+V +LD I FL ++L+AH VW++ +I +L GV VSH P S M++ G AP+ ++
Sbjct: 226 MCSVNYLDDIGFLGPDVLAAHCVWLSDGDIEILRERGVNVSHNPVSNMKLASGIAPVPKL 285
Query: 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 379
L + VSLGTDG SNN + + +EM A+L++K T DP ALPA VL MAT+
Sbjct: 286 LERGVNVSLGTDGCASNNNLDMFEEMKTAALLHK------VNTMDPTALPARQVLEMATV 339
Query: 380 NGAKSVLWDNDIGSLEAGKK 399
NGAK++ + G L+ G
Sbjct: 340 NGAKAL--GINTGMLKEGYL 357
|
Length = 430 |
| >gnl|CDD|236366 PRK09045, PRK09045, N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 234 bits (598), Expect = 7e-73
Identities = 126/389 (32%), Positives = 193/389 (49%), Gaps = 38/389 (9%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ IV ++ V + V + RI AI A+ +++ A + ++L +L+P
Sbjct: 9 LLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARYA--AAETVELPDHVLIP 66
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDS-YISTLLCGIELIHSGV 139
G +N H H + L +G+ADD+ LMTWL D IWP E E+ TLL E++ G
Sbjct: 67 GLINAHTHAAMSLLRGLADDLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGT 126
Query: 140 TCFAEAGGQHVSEM-------AKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192
TCF ++M A+A G+RA + +D P +WA D+ +
Sbjct: 127 TCF--------NDMYFFPEAAAEAAHQAGMRAQIGMPVLD----FPTAWA-SDADEYLAK 173
Query: 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252
EL+ + H I F +D L R +A + IH+H+ E E
Sbjct: 174 GLELHDQWRH--HPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQE--- 228
Query: 253 VMDTRKVDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM 310
+ D+ K HG + L ++ L L++ H + EI LL+ G V HCP S +++
Sbjct: 229 IADSLK-QHGQRPLARLARLGLLGPRLIAVHMTQLTDAEIALLAETGCSVVHCPESNLKL 287
Query: 311 L-GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALP 369
GF P+ ++L A + V+LGTDGA SNN + + EM A+L+ K D ALP
Sbjct: 288 ASGFCPVAKLLQAGVNVALGTDGAASNNDLDLFGEMRTAALLAKA------VAGDATALP 341
Query: 370 AETVLRMATINGAKSVLWDNDIGSLEAGK 398
A T LRMAT+NGA+++ D++IGSLE GK
Sbjct: 342 AHTALRMATLNGARALGLDDEIGSLEPGK 370
|
Length = 443 |
| >gnl|CDD|223479 COG0402, SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 226 bits (577), Expect = 4e-70
Identities = 123/387 (31%), Positives = 195/387 (50%), Gaps = 26/387 (6%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
+ +++ +++T D E R+ +G + + +I AIG +A+ +++ID + ++
Sbjct: 1 MTMLLIRGDLLLTNDPEGRI-EDGDLVIEDGKIVAIGANAEGPP-----DEEVIDAKGKL 54
Query: 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIH 136
+LPGFVN H H Q L +G+ADD+ L+ WL +WP E+ + TEED Y LL +E++
Sbjct: 55 VLPGFVNAHTHLDQTLLRGLADDLPLLEWLERYVWPREARLLTEEDLYARALLALLEMLR 114
Query: 137 SGVTC---FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 193
+G T + + +A +GLRA L D P A TD+ ++
Sbjct: 115 NGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQD--VAFPDPGAE--TDEELEET 170
Query: 194 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253
+EL + H GR + + LL ++AR++ +H+H+AE E V
Sbjct: 171 EELLREAHGL--GRDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDE--VE 226
Query: 254 MDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LG 312
V LD + L ++ L AH V ++ E+ LL+ +G V HCP S +++ G
Sbjct: 227 RVLEPYGARPVERLDLLGLLGSHTLLAHCVHLSEEELELLAESGASVVHCPRSNLKLGSG 286
Query: 313 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372
AP++ +L + V+LGTDGA SNN + ++ EM A L+ K AA
Sbjct: 287 IAPVRRLLERGVNVALGTDGAASNNVLDMLREMRTADLLQKLA------GGLLAAQLPGE 340
Query: 373 VLRMATINGAKSVLWDNDIGSLEAGKK 399
L MAT+ GAK L +DIGSLE GKK
Sbjct: 341 ALDMATLGGAK-ALGLDDIGSLEVGKK 366
|
Length = 421 |
| >gnl|CDD|181411 PRK08393, PRK08393, N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 218 bits (558), Expect = 3e-67
Identities = 117/344 (34%), Positives = 188/344 (54%), Gaps = 23/344 (6%)
Query: 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVD 102
V + ++I + ++ ++ AD +ID ++ PGF+N H H+ L +G+ADDV
Sbjct: 23 VLIEGNKIVEVKRN------INKPADTVIDASGSVVSPGFINAHTHSPMVLLRGLADDVP 76
Query: 103 LMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGL 162
LM WL + IWP E + +D Y L +E+I SG T F + H+ E+AKA +GL
Sbjct: 77 LMEWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMYF-HMEEVAKATLEVGL 135
Query: 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222
R L +D G+ ++ T+ ++ ++L + R+ FG +
Sbjct: 136 RGYLSYGMVDLGDEEKREKEIKETEKLMEFIEKLNSP-------RVHFVFGPHAPYTCSL 188
Query: 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 282
LL R+ ARE+ I +H++E E + + K V LD+I FL ++++AH
Sbjct: 189 ALLKWVREKAREWNKLITIHLSETMDEIKQI--REKYGKSPVVLLDEIGFLNEDVIAAHG 246
Query: 283 VWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSI 341
VW++ +I +L+ AGV V+H PAS M++ G P++++L+A + V+LGTDGA SNN + +
Sbjct: 247 VWLSSRDIRILASAGVTVAHNPASNMKLGSGVMPLRKLLNAGVNVALGTDGAASNNNLDM 306
Query: 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385
+ EM LA+L++K DP AETV RMAT NGAK++
Sbjct: 307 LREMKLAALLHKVH------NLDPTIADAETVFRMATQNGAKAL 344
|
Length = 424 |
| >gnl|CDD|180548 PRK06380, PRK06380, metal-dependent hydrolase; Provisional | Back alignment and domain information |
|---|
Score = 203 bits (518), Expect = 2e-61
Identities = 130/392 (33%), Positives = 204/392 (52%), Gaps = 51/392 (13%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
++++ NA IVT +++ + + G V++ ++I +G + AD IID ++++
Sbjct: 2 SILIKNAWIVTQNEKREILQ-GNVYIEGNKIVYVGDVNE-------EADYIIDATGKVVM 53
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PG +NTH H +KG+ DDVDL +L + + Y+S T E Y S L E+I+SG+
Sbjct: 54 PGLINTHAHVGMTASKGLFDDVDLEEFL-MKTFKYDSKRTREGIYNSAKLGMYEMINSGI 112
Query: 140 TCFAEAGGQHVSE--MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK--- 194
T F + + SE +AKA E LG+RA L SWA D+ I +QK
Sbjct: 113 TAFVDL---YYSEDIIAKAAEELGIRAFL-------------SWA--VLDEEITTQKGDP 154
Query: 195 ----ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250
E + + H + + G++ I A D L+ +++A ++ T +HMH++E E
Sbjct: 155 LNNAENFIREHRNEE-LVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRKE- 212
Query: 251 QVVMDTRK-VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 309
V D K V L+KI FL + L++AH VW + EI LLS+ GVKVS S +
Sbjct: 213 --VYDHVKRTGERPVEHLEKIGFLNSKLIAAHCVWATYHEIKLLSKNGVKVSWNSVSNFK 270
Query: 310 ML--GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAA 367
+ G PI EML I V++GTD SNN + + + M ++L K N D +
Sbjct: 271 LGTGGSPPIPEMLDNGINVTIGTDSNGSNNSLDMFEAMKFSALSVK------NERWDASI 324
Query: 368 LPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
+ A+ +L ATIN AK++ + + GS+E GK
Sbjct: 325 IKAQEILDFATINAAKAL--ELNAGSIEVGKL 354
|
Length = 418 |
| >gnl|CDD|236184 PRK08203, PRK08203, hydroxydechloroatrazine ethylaminohydrolase; Reviewed | Back alignment and domain information |
|---|
Score = 193 bits (492), Expect = 4e-57
Identities = 118/397 (29%), Positives = 186/397 (46%), Gaps = 33/397 (8%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
++ I + IVTMD R +GG+ V RI +G + Q AD++ D + +
Sbjct: 1 TTLWIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQP----ADEVFDARGHV 56
Query: 78 LLPGFVNTHVHTSQQLAKGI--ADDVDLMTWLHD--RIWPYESNMTEEDSYISTLLCGIE 133
+ PG VNTH H Q L + + A D +L WL +W + +T E ++T E
Sbjct: 57 VTPGLVNTHHHFYQTLTRALPAAQDAELFPWLTTLYPVW---ARLTPEMVRVATQTALAE 113
Query: 134 LIHSGVTC-------FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE---GLPASWAV 183
L+ SG T F + + +A +G+R + +M GE GLP V
Sbjct: 114 LLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSMSLGESDGGLPPDSVV 173
Query: 184 RTTDDCIQSQKELYAKHHHAADG-RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 242
D + + L ++H G +RI + + L+ E+ +AR +H H
Sbjct: 174 EDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTH 233
Query: 243 VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302
+AE E + + V +L+ + +L ++ AH V ++ EI L+R G V+H
Sbjct: 234 LAETLDEEAFCL--ERFGMRPVDYLEDLGWLGPDVWLAHCVHLDDAEIARLARTGTGVAH 291
Query: 303 CPASAMRML-GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANG 361
CP S MR+ G AP++E+ A + V LG DG+ SN+ +++ E A L+ + R G
Sbjct: 292 CPCSNMRLASGIAPVRELRAAGVPVGLGVDGSASNDGSNLIGEARQALLLQRLR----YG 347
Query: 362 TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398
P A+ A L AT+ GA+ VL +DIGSL GK
Sbjct: 348 ---PDAMTAREALEWATLGGAR-VLGRDDIGSLAPGK 380
|
Length = 451 |
| >gnl|CDD|180657 PRK06687, PRK06687, chlorohydrolase; Validated | Back alignment and domain information |
|---|
Score = 174 bits (441), Expect = 4e-50
Identities = 109/382 (28%), Positives = 192/382 (50%), Gaps = 23/382 (6%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
+ + IVT D++ V+ +G + V +I +GQ F + A+QIID Q ++PG
Sbjct: 3 VFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDK---PAFLEQAEQIIDYQGAWIMPG 59
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
VN H H++ +GI DD +L WL+D IWP ES T + + + E++ SG T
Sbjct: 60 LVNCHTHSAMTGLRGIRDDSNLHEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTT 119
Query: 142 FAE---AGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198
F + G + ++ + V+ +R C T+ E TT + I + +
Sbjct: 120 FNDMYNPNGVDIQQIYQVVKTSKMR-CYFSPTLFSSE-------TETTAETISRTRSIID 171
Query: 199 KHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258
+ + ++ + + LL + +MA+E +H+HVAE E+ +++ ++
Sbjct: 172 EILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIIL--KR 229
Query: 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIK 317
+ FL+++ +L + + AH V +N EI L+ + V ++H P S +++ G API
Sbjct: 230 YGKRPLAFLEELGYLDHPSVFAHGVELNEREIERLASSQVAIAHNPISNLKLASGIAPII 289
Query: 318 EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377
++ A + V + TD SNN + + +E A+L+ K + D + P ET L++
Sbjct: 290 QLQKAGVAVGIATDSVASNNNLDMFEEGRTAALLQKMKS------GDASQFPIETALKVL 343
Query: 378 TINGAKSVLWDNDIGSLEAGKK 399
TI GAK++ +N IGSLE GK+
Sbjct: 344 TIEGAKALGMENQIGSLEVGKQ 365
|
Length = 419 |
| >gnl|CDD|185390 PRK15493, PRK15493, 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional | Back alignment and domain information |
|---|
Score = 170 bits (431), Expect = 1e-48
Identities = 119/378 (31%), Positives = 182/378 (48%), Gaps = 24/378 (6%)
Query: 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVN 84
NA IVTM++++ V NG + V D+I + S + F D++ID++ + +LPG VN
Sbjct: 7 NATIVTMNEQNEVIENGYIIVENDQIIDV-NSGEFASDFE--VDEVIDMKGKWVLPGLVN 63
Query: 85 THVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE 144
TH H L +GI DD+ L WL RIWP ES T E + ST L +E++ SG T F++
Sbjct: 64 THTHVVMSLLRGIGDDMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSD 123
Query: 145 AG---GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
G + + V G+RA + ++ G A+ + E Y K +
Sbjct: 124 MFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGTKEDEKKAIE--------EAEKYVKRY 175
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDH 261
+ G + + LL E +A E +T +H+H++E E + + +
Sbjct: 176 YNESGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDI--EAQYGK 233
Query: 262 GTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEML 320
V + + + AH V +N E L+ V+V+H P S +++ G A +K ML
Sbjct: 234 RPVEYAASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNLKLGSGIANVKAML 293
Query: 321 HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 380
A I V + TD SNN + + +EM +A+L+ KG D ALP ET L +AT
Sbjct: 294 EAGIKVGIATDSVASNNNLDMFEEMRIATLLQKGIH------QDATALPVETALTLAT-K 346
Query: 381 GAKSVLWDNDIGSLEAGK 398
GA V+ GSLE GK
Sbjct: 347 GAAEVIGMKQTGSLEVGK 364
|
Length = 435 |
| >gnl|CDD|235963 PRK07203, PRK07203, putative chlorohydrolase/aminohydrolase; Validated | Back alignment and domain information |
|---|
Score = 140 bits (356), Expect = 1e-37
Identities = 109/403 (27%), Positives = 177/403 (43%), Gaps = 57/403 (14%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N +T D V +G + + + I IG + ++ ++ + ID + ++++P
Sbjct: 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKYPD--AEFIDAKGKLIMP 59
Query: 81 GFVNTHVHTSQQLAKGIADDV----DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
G +N+H H LA+G+ ++ D ++ L + W + +T ED Y S L+C +E I
Sbjct: 60 GLINSHNHIYSGLARGMMANIPPPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIK 119
Query: 137 SGVTC-------FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTD-D 188
+GVT GG + +A A + +GLRA L C E T+D D
Sbjct: 120 NGVTTVFDHHASPNYIGGS-LFTIADAAKKVGLRAML------CYE---------TSDRD 163
Query: 189 CIQSQKE------LYAKHHHAADG-RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 241
+ +E + KH A + FG+ +D L + R+ +E G H+
Sbjct: 164 GEKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHI 223
Query: 242 HVAEIPYENQVVMDTRKVDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299
HVAE Y+ V D+ K +G V L L L+AH ++++ EI LL
Sbjct: 224 HVAEGIYD---VSDSHK-KYGKDIVERLADFGLLGEKTLAAHCIYLSDEEIDLLKETDTF 279
Query: 300 VSHCPASAM-RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVF 358
V H P S M +G+ P+ EM+ I + LGTDG S+ + + +A+ +K
Sbjct: 280 VVHNPESNMGNAVGYNPVLEMIKNGILLGLGTDGYTSD----MFESYKVANFKHK----H 331
Query: 359 ANGTTDPAALPAETVLRMATINGAKSV--LWDNDIGSLEAGKK 399
A G DP E M N K + G LE G K
Sbjct: 332 AGG--DPNVGWPE-SPAMLFENNNKIAERYFGAKFGILEEGAK 371
|
Length = 442 |
| >gnl|CDD|237088 PRK12393, PRK12393, amidohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 134 bits (340), Expect = 2e-35
Identities = 109/406 (26%), Positives = 175/406 (43%), Gaps = 46/406 (11%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQS 75
S +I + A I+T G ++D RI AIG +++ID
Sbjct: 1 MPSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGALT------PLPGERVIDATD 54
Query: 76 QILLPGFVNTHVHTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIE 133
++ PG+VNTH H Q L KG+ + L WL + + + E+ ++ + +E
Sbjct: 55 CVVYPGWVNTHHHLFQSLLKGVPAGINQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVE 114
Query: 134 LIHSGVTCFAE------AGGQHVSEMA--KAVELLGLRACL-----VQSTMDCGEGLPAS 180
L+ SG T A+ G + E LG+R L Q+ D GLP +
Sbjct: 115 LLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFVLCRGGATQTRGDHP-GLPTA 173
Query: 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM-------NATDRLLLETRDMAR 233
T D + + L +++H A+ +R R ++ + LL E AR
Sbjct: 174 LRPETLDQMLADVERLVSRYHDASPDSLR-----RVVVAPTTPTFSLPPELLREVARAAR 228
Query: 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLL 293
+H H++E + V K V F+ + ++L ++ AH V ++ EI LL
Sbjct: 229 GMGLRLHSHLSET--VDYVDFCREKYGMTPVQFVAEHDWLGPDVWFAHLVKLDAEEIALL 286
Query: 294 SRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLIN 352
++ G ++HCP S R+ G AP M A + VSLG DGA SN ++ E + A L++
Sbjct: 287 AQTGTGIAHCPQSNGRLGSGIAPALAMEAAGVPVSLGVDGAASNESADMLSEAHAAWLLH 346
Query: 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398
+ G A E V+ T GA+ VL + IG+L G+
Sbjct: 347 R----AEGG---ADATTVEDVVHWGTAGGAR-VLGLDAIGTLAVGQ 384
|
Length = 457 |
| >gnl|CDD|132357 TIGR03314, Se_ssnA, putative selenium metabolism protein SsnA | Back alignment and domain information |
|---|
Score = 131 bits (332), Expect = 2e-34
Identities = 101/394 (25%), Positives = 162/394 (41%), Gaps = 39/394 (9%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N V +D + G + + D IKA+G + ++ Q++ ID + ++++P
Sbjct: 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKYP--EATFIDAKGKLIMP 58
Query: 81 GFVNTHVHTSQQLAKGIADDV----DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
GF+NTH H A+G+ D+ D ++ L + W + +T ED Y S L+C ++ I
Sbjct: 59 GFINTHNHFYSTFARGMMADIPPPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIK 118
Query: 137 SGVTC-------FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDC 189
SG T G +S + KA + GLR L T D G V
Sbjct: 119 SGCTTVIDHHASPNAITGS-LSTIRKAADEAGLRTMLCYETSDRDGGKEMQEGV------ 171
Query: 190 IQSQKELYAKHHHAADGR-IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248
+ + K + + G +D L R+ + G H+HVAE Y
Sbjct: 172 --EENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIY 229
Query: 249 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM 308
+ V K V L L + L+AH ++++ EI LL+ V H P S M
Sbjct: 230 D--VEDSHHKYGKDIVERLADFGLLGSKTLAAHCIYLSDREIELLNETDTFVVHNPESNM 287
Query: 309 -RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAA 367
+G+ P+ M I + LGTDG S+ + + + A+ +K A G D A
Sbjct: 288 GNAVGYNPVLRMFKNGILLGLGTDGYTSD----MFESLKFANFKHK----DAGG--DLNA 337
Query: 368 LPAETVLRMATINGAK--SVLWDNDIGSLEAGKK 399
E M N + + G LE G K
Sbjct: 338 AWPE-SPAMLFENNNEIAERNFGAKFGRLEPGAK 370
|
Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown. Length = 441 |
| >gnl|CDD|238628 cd01303, GDEase, Guanine deaminase (GDEase) | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 1e-28
Identities = 95/389 (24%), Positives = 156/389 (40%), Gaps = 39/389 (10%)
Query: 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87
+ ++ RV +G + VV I A G + + + A ++ID +Q +LPGF++TH+
Sbjct: 14 LELVEDALRVVEDGLIVVVDGNIIAAGAAETLKRAAKPGA-RVIDSPNQFILPGFIDTHI 72
Query: 88 HTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-------SYISTLLCGIELIHSGVT 140
H Q G L+ WL +P E+ + ++ EL+ +G T
Sbjct: 73 HAPQYANIGSGLGEPLLDWLETYTFPEEAKFADPAYAREVYGRFLD------ELLRNGTT 126
Query: 141 C---FAEAGGQHVSEMAKAVELLGLRACLVQSTMD--CGEGL--PASWAVRTTDDCIQSQ 193
FA + + + G RA + MD E A + R T I+
Sbjct: 127 TACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNAPEYYRDTAESSYRDTKRLIERW 186
Query: 194 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIPYENQV 252
+ A R F + ++ LL +A+E I H++E E
Sbjct: 187 HGKSGRVKPAITPR----FAP----SCSEELLAALGKLAKEHPDLHIQTHISENLDEIAW 238
Query: 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML- 311
V + + DK L + AH V ++ E LL G V+HCP S + L
Sbjct: 239 VKELFPGARDYLDVYDKYGLLTEKTVLAHCVHLSEEEFNLLKERGASVAHCPTSNL-FLG 297
Query: 312 -GFAPIKEMLHADICVSLGTD-GAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALP 369
G ++++L A I V LGTD G S++D + A +++ A L
Sbjct: 298 SGLFDVRKLLDAGIKVGLGTDVGG--GTSFSMLDTLRQAYKVSRLLGY---ELGGHAKLS 352
Query: 370 AETVLRMATINGAKSVLWDNDIGSLEAGK 398
+AT+ GA+++ D+ IG+ E GK
Sbjct: 353 PAEAFYLATLGGAEALGLDDKIGNFEVGK 381
|
Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool. Length = 429 |
| >gnl|CDD|181288 PRK08204, PRK08204, hypothetical protein; Provisional | Back alignment and domain information |
|---|
Score = 113 bits (285), Expect = 8e-28
Identities = 91/395 (23%), Positives = 147/395 (37%), Gaps = 41/395 (10%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++ ++TMD G + + DRI A+ S + +++D + I++P
Sbjct: 4 TLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIE------APDAEVVDARGMIVMP 57
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMT---WLHDRIWPYESNMTEEDSYISTLLCGIELIHS 137
G V+TH HT Q + +GI D L T +H + P ED YI+ LL +E + +
Sbjct: 58 GLVDTHRHTWQSVLRGIGADWTLQTYFREIHGNLGPM---FRPEDVYIANLLGALEALDA 114
Query: 138 GVT-----CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192
GVT +H + + G+RA + P +D +
Sbjct: 115 GVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPGPSPYWPFDSVPHPREDIRRV 174
Query: 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252
+K ++ DG + + IR ++ + +ARE I MH
Sbjct: 175 KKRYFSSD----DGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQG-------- 222
Query: 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L 311
V L L +L H ++ E+ LL+ +G S P M M
Sbjct: 223 -FGPWGATPRGVEQLHDAGLLGPDLNLVHGNDLSDDELKLLADSGGSFSVTPEIEMMMGH 281
Query: 312 GFAPIKEMLHADICVSLGTDGAPSNN-----RMSIVDEMYLASLINKGREVFANGTT--D 364
G+ +L + SLG D S +M + A G
Sbjct: 282 GYPVTGRLLAHGVRPSLGVDVVTSTGGDMFTQMRFALQAERARD---NAVHLREGGMPPP 338
Query: 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
L A VL ATI GA+++ ++ IGSL GK+
Sbjct: 339 RLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQ 373
|
Length = 449 |
| >gnl|CDD|132012 TIGR02967, guan_deamin, guanine deaminase | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 1e-25
Identities = 87/378 (23%), Positives = 157/378 (41%), Gaps = 41/378 (10%)
Query: 36 RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ--QL 93
F +G + V RI A+G A++ + +I D + +++PGF++TH+H Q +
Sbjct: 2 EYFEDGLLVVENGRIVAVGDYAELKETLPA-GVEIDDYRGHLIMPGFIDTHIHYPQTEMI 60
Query: 94 AKGIADDVDLMTWLHDRIWPYESNMTEED--SYISTLLCGIELIHSGVTC---FAEAGGQ 148
A + L+ WL +P E+ + D ++ EL+ +G T FA +
Sbjct: 61 A---SYGEQLLEWLEKYTFPTEARFADPDHAEEVAEFFLD-ELLRNGTTTALVFATVHPE 116
Query: 149 HVSEMAKAVELLGLRACLVQSTMD--CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADG 206
V + +A G+R + MD + L T + K L + H G
Sbjct: 117 SVDALFEAALKRGMRMIAGKVLMDRNAPDYL-----RDTAESSYDESKALIERWH----G 167
Query: 207 RIRIWFGI--RQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHGT 263
+ R+ + + R ++ L ++A+E+ + H++E E V +
Sbjct: 168 KGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFPEAKDY 227
Query: 264 VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHA 322
+ D L + AH + ++ E L+ G ++HCP S + + G +K+ L
Sbjct: 228 LDVYDHYGLLGRRSVFAHCIHLSDEECQRLAETGAAIAHCPTSNLFLGSGLFNLKKALEH 287
Query: 323 DICVSLGTD--GAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 380
+ V LGTD G S + + + E Y S + R L +AT+
Sbjct: 288 GVRVGLGTDVGGGTSFSMLQTLREAYKVSQLQGAR------------LSPFEAFYLATLG 335
Query: 381 GAKSVLWDNDIGSLEAGK 398
GA+++ D+ IG+ E GK
Sbjct: 336 GARALDLDDRIGNFEPGK 353
|
This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model [Purines, pyrimidines, nucleosides, and nucleotides, Other]. Length = 401 |
| >gnl|CDD|180428 PRK06151, PRK06151, N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 86.6 bits (215), Expect = 2e-18
Identities = 95/410 (23%), Positives = 155/410 (37%), Gaps = 80/410 (19%)
Query: 36 RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95
R+ R+G V DRI +G F D++ID + ++ PGF++ +
Sbjct: 19 RLLRDGEVVFEGDRILFVGHR------FDGEVDRVIDAGNALVGPGFIDLDALS------ 66
Query: 96 GIADDVD---LMTWLHD-----RIWP-------YESNMTEEDSYISTLLCGIELIHSGVT 140
D+D L R+W T E+ +L+ +G+T
Sbjct: 67 ----DLDTTILGLDNGPGWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGIT 122
Query: 141 CFAEAG-------GQHVSEMAKAVEL---LGLRACLVQSTMDCGEGLPASWAVRTTDDCI 190
+ +E A A E LGLR L + G L A ++ D
Sbjct: 123 TAMPIASLFYRQWAETYAEFAAAAEAAGRLGLRVYLGPAYRSGGSVLEADGSLEVVFDEA 182
Query: 191 QSQKEL-----YAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244
+ L + K A +G +R +I T LL T ARE + +H A
Sbjct: 183 RGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAARELGCPVRLHCA 242
Query: 245 EIPYENQVVMDTRKVDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTE---------IGLL 293
+ E ++T + HGT + +L + L LL H +++ + + LL
Sbjct: 243 QGVLE----VETVRRLHGTTPLEWLADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALL 298
Query: 294 SRAGVKVSHCPASAMRMLG----FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLAS 349
+ GV + HCP + R F +E A I ++LGTD P + M++ + L
Sbjct: 299 AEHGVSIVHCPLVSARHGSALNSFDRYRE---AGINLALGTDTFPPDMVMNMRVGLILGR 355
Query: 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
++ D A A + AT+ GA++ L +D+G L G K
Sbjct: 356 VVEG----------DLDAASAADLFDAATLGGARA-LGRDDLGRLAPGAK 394
|
Length = 488 |
| >gnl|CDD|238637 cd01312, Met_dep_hydrolase_D, Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Score = 81.7 bits (202), Expect = 5e-17
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 30/195 (15%)
Query: 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR----------------KVDHGTVTFL 267
L + D+A++ + H E E + + +++ K + FL
Sbjct: 164 LAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLPKPKKLATAIDFL 223
Query: 268 DKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML--GFAPIKEMLHADIC 325
D + L + H V+ N E +L+ G ++ CP S R+L G + E+ A I
Sbjct: 224 DMLGGLGTRVSFVHCVYANLEEAEILASRGASIALCPRSN-RLLNGGKLDVSELKKAGIP 282
Query: 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385
VSLGTDG SN +S++DE+ ++ D L +E +L MAT+ GA+++
Sbjct: 283 VSLGTDGLSSNISLSLLDELRALLDLHPEE--------DLLELASE-LLLMATLGGARAL 333
Query: 386 LWDNDIGSLEAGKKV 400
+N G +EAGK+
Sbjct: 334 GLNN--GEIEAGKRA 346
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. Length = 381 |
| >gnl|CDD|238617 cd01292, metallo-dependent_hydrolases, Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Score = 79.7 bits (196), Expect = 8e-17
Identities = 67/308 (21%), Positives = 106/308 (34%), Gaps = 40/308 (12%)
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
F++THVH D L + ++ ED Y TL L+ GVT
Sbjct: 1 FIDTHVH---------LDGSALRGTRLNLELKEAEELSPEDLYEDTLRALEALLAGGVTT 51
Query: 142 FAEAGGQHVSEMAKAVELLGLRACLVQSTMD--CGEGLPASWAVRTTDDCIQSQKELYAK 199
+ G KA A + + G G+P A D + L
Sbjct: 52 VVDMGSTPPPTTTKAAIEAVAEAARASAGIRVVLGLGIPGVPAAVDEDAEALLLELLRRG 111
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259
A G +++ G +D L + AR+ + +H E+P
Sbjct: 112 LELGAVG-LKL-AGPYTATGLSDESLRRVLEEARKLGLPVVIHAGELP-----------D 158
Query: 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR----MLGFAP 315
+ L + L ++ H ++ + LL AGV + CP S G
Sbjct: 159 PTRALEDLVALLRLGGRVVIGHVSHLDPELLELLKEAGVSLEVCPLSNYLLGRDGEGAEA 218
Query: 316 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375
++ +L I V+LGTDG P ++ + L + + L E LR
Sbjct: 219 LRRLLELGIRVTLGTDGPPHPLGTDLLALLRLLLKVLR------------LGLSLEEALR 266
Query: 376 MATINGAK 383
+ATIN A+
Sbjct: 267 LATINPAR 274
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others. Length = 275 |
| >gnl|CDD|238638 cd01313, Met_dep_hydrolase_E, Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Score = 76.0 bits (187), Expect = 5e-15
Identities = 91/402 (22%), Positives = 139/402 (34%), Gaps = 71/402 (17%)
Query: 36 RVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94
RN + V D RI A+ A + + L LLPG N H H Q+
Sbjct: 6 GWERNVRIEVDADGRIAAVNPDT---------ATEAVALLGGALLPGMPNLHSHAFQRAM 56
Query: 95 KGIADDVDLMTWLHDRIWPYESNM-------TEEDSYISTLLCGIELIHSGVTCFAEAGG 147
G+ + D W + M T E IE++ +G+T E
Sbjct: 57 AGLTEYRGSAA---DSFWTWRELMYRFAARLTPEQIEAIARQLYIEMLLAGITAVGEFHY 113
Query: 148 QH----------VSEMAKAV----ELLGLRACLVQ---STMDCGEGLPASWAVR---TTD 187
H +E+A+ V G+ L+ + G P R +
Sbjct: 114 VHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAGFGGPAPNPGQRRFINGYE 173
Query: 188 DCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247
D + ++ A RI + + A L K +H+H+AE P
Sbjct: 174 DFLGLLEKALRAVKEHAAARIGVAP---HSLRAVPAEQLAALAALASEKAPVHIHLAEQP 230
Query: 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT-----EIGLLSRAGVKVSH 302
E + V L L + L A V+ T E LL R+G V
Sbjct: 231 KEVDDCLAAHG--RRPVELL-----LDHGHLDARWCLVHATHLTDNETLLLGRSGAVVGL 283
Query: 303 CPASAMRML--GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEM----YLASLINKGRE 356
CP + L G P +L A + +G+D SN R+ +++E+ Y L ++ R
Sbjct: 284 CP-TTEANLGDGIFPAAALLAAGGRIGIGSD---SNARIDLLEELRQLEYSQRLRDRARN 339
Query: 357 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398
V A A +L A GA+++ G+LEAG
Sbjct: 340 VLA----TAGGSSARALLDAALAGGAQALGL--ATGALEAGA 375
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. Length = 418 |
| >gnl|CDD|236419 PRK09228, PRK09228, guanine deaminase; Provisional | Back alignment and domain information |
|---|
Score = 72.1 bits (178), Expect = 9e-14
Identities = 90/384 (23%), Positives = 153/384 (39%), Gaps = 53/384 (13%)
Query: 36 RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ---- 91
R +G + V RI A G A++ Q A ++ D + +++LPGF++TH+H Q
Sbjct: 27 RYIEDGLLLVEDGRIVAAGPYAELRAQLPADA-EVTDYRGKLILPGFIDTHIHYPQTDMI 85
Query: 92 -QLAKGIADDVDLMTWLHDRIWPYESNMTEED--SYISTLLCGIELIHSGVTC---FAEA 145
+ L+ WL+ +P E + ++ EL+ +G T F
Sbjct: 86 ASYGEQ------LLDWLNTYTFPEERRFADPAYAREVAEFFLD-ELLRNGTTTALVFGTV 138
Query: 146 GGQHVSEMAKAVELLGLRACLVQSTMD--CGEGLPASWAVRTTDDCIQSQKELYAKHHHA 203
Q V + +A E +R + MD +GL T + K L + H
Sbjct: 139 HPQSVDALFEAAEARNMRMIAGKVLMDRNAPDGL-----RDTAESGYDDSKALIERWH-- 191
Query: 204 ADGRIRIWFGI--RQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVD 260
G+ R+ + I R +T L +ARE I H++E E + +++
Sbjct: 192 --GKGRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSENLDE---IAWVKELF 246
Query: 261 HGTVTFLD---KIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML--GFAP 315
+LD + L + AH + + E L+ G ++ CP S + L G
Sbjct: 247 PEARDYLDVYERYGLLGPRAVFAHCIHLEDRERRRLAETGAAIAFCPTSNL-FLGSGLFD 305
Query: 316 IKEMLHADICVSLGTD-GAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374
+K A + V LGTD G S++ M A + + + L
Sbjct: 306 LKRADAAGVRVGLGTDVGG--GTSFSMLQTMNEAYKVQQLQGY---------RLSPFQAF 354
Query: 375 RMATINGAKSVLWDNDIGSLEAGK 398
+AT+ GA+++ D+ IG+L GK
Sbjct: 355 YLATLGGARALGLDDRIGNLAPGK 378
|
Length = 433 |
| >gnl|CDD|216825 pfam01979, Amidohydro_1, Amidohydrolase family | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 1e-12
Identities = 72/364 (19%), Positives = 104/364 (28%), Gaps = 105/364 (28%)
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
I+LPG ++ HVH + EDSY + L ++
Sbjct: 1 IVLPGLIDAHVH------------------------LESPLLRGEDSYEAILTGAKAMLR 36
Query: 137 SGVTCFAE-------AGGQHVSEMAKAVELLGLRACL-VQSTMDCGEGLPASWAVRTTDD 188
SG T + + M L + + G V
Sbjct: 37 SGTTTVLDTPTSANTSIPLRKEIMEGLAAAPKLEPNVELLLKGSVGGRAELGEVVIDGAG 96
Query: 189 CIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD------------RLLLETRDMAREFK 236
K + G+ + D L E + A +
Sbjct: 97 EEAKAGADLIKVIEDGGKTAKAIDGVLPALAPHDPPTVSHEGLKNEVELAEETEEAEKLG 156
Query: 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA 296
+H+H AE E L L AH + ++ I LL A
Sbjct: 157 LLVHIHAAEASGE-------------------VNAILGGVDLLAHCLHLDDEAIELLKEA 197
Query: 297 GVKVSHCPASAMRML---------------------GFAPIKEMLHADICVSLGTDGAPS 335
G ++HCP S +L G A + + V LGTDGA
Sbjct: 198 GSGIAHCPLSNESILHRGGRFSLMSGDAQGIGELGSGGARLARLADKGGVVGLGTDGAGL 257
Query: 336 NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395
N + DP L LRMATIN AK++ D+ +GS+E
Sbjct: 258 NGKDFY---------------------LDPDGLSPIEALRMATINPAKALGLDDRVGSIE 296
Query: 396 AGKK 399
GK
Sbjct: 297 VGKD 300
|
This family of enzymes are a a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included. Length = 307 |
| >gnl|CDD|181419 PRK08418, PRK08418, chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 66.9 bits (164), Expect = 4e-12
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLG--FAPIKEMLHADICVSLG 329
F L H V+ + E+ + ++HCP S R+L +++ A I S+
Sbjct: 251 FKGLRTLFTHCVYASEEELEKIKSKNASITHCPFSN-RLLSNKALDLEKAKKAGINYSIA 309
Query: 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389
TDG SN +S++DE+ A+L + L A+ +L AT GAK++ +N
Sbjct: 310 TDGLSSNISLSLLDELR-AAL-------LTHANMPLLEL-AKILLLSATRYGAKALGLNN 360
Query: 390 DIGSLEAGKKV 400
G ++ GK
Sbjct: 361 --GEIKEGKDA 369
|
Length = 408 |
| >gnl|CDD|224149 COG1228, HutI, Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 60.8 bits (148), Expect = 3e-10
Identities = 76/425 (17%), Positives = 134/425 (31%), Gaps = 100/425 (23%)
Query: 17 SSSTMILHNAVIVTMDKE----SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIID 72
++ ++ + A++ T+ + +G V + +I A+G + ++ID
Sbjct: 1 TALDLLANIAMLATLAGRGLPGLGIIEDGAVLIEDGKIVAVGPEEIDIPA----GAEVID 56
Query: 73 LQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTL--LC 130
+ + + PG ++ H H G SY L
Sbjct: 57 AKGKTVTPGLIDAHTHL------GFGGSR----------GGEFELREAGASYTEILAAGG 100
Query: 131 GIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCI 190
GI + G T + G KA L L+ GE T+
Sbjct: 101 GILPLDRGFTTARDGGL-------KATALPRLKRAGSAGVTT-GERKSGYGLDLETEGGH 152
Query: 191 --------QSQKELYAKHHHAADG--------RIRIWFGIRQIMNA-------------- 220
+S+ AA G R G R ++
Sbjct: 153 LRAAAGLKESRPVAVGSTPLAAHGVPEERKATREAYVAGARLLIKIVATGGLASFVDAFC 212
Query: 221 -----TDRLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKVDHGTVTFLDKIEFLQ 274
+ + A + + H + + + + +HGT LD E
Sbjct: 213 EGGQFSPEEIRAVLAAALKAGIPVKAHAHGADGIKLAIRLGAKSAEHGT--LLDH-ETAA 269
Query: 275 NNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP 334
LL+ LL R ++ L + P ++++ A + V++GTD P
Sbjct: 270 --LLAEKGAGTPVPV--LLPRTKFELRE--------LDYKPARKLIDAGVKVAIGTDHNP 317
Query: 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 394
+ S+ EM LA + + E L+ ATIN AK++ + +GSL
Sbjct: 318 GTSHGSLALEMALAVRLG---------------MTPEEALKAATINAAKALGLADKVGSL 362
Query: 395 EAGKK 399
E GK
Sbjct: 363 EPGKD 367
|
Length = 406 |
| >gnl|CDD|238630 cd01305, archeal_chlorohydrolases, Predicted chlorohydrolases | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 8e-10
Identities = 63/323 (19%), Positives = 106/323 (32%), Gaps = 77/323 (23%)
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRI--WPYESNMTEEDSYISTLL--CGI 132
IL+P VN H H K + D + L D + P D LL
Sbjct: 1 ILIPALVNAHTHLGDSAIKEVGDGLPL-----DDLVAPP--------DGLKHRLLAQADD 47
Query: 133 ELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE-GLPASWAVRTTDDCIQ 191
+ + + G+ A D E G+ +R
Sbjct: 48 RELAEAMRKVLRDMRET-----------GIGAFA-----DFREGGVEGIELLRRALGK-- 89
Query: 192 SQKELYAKHHHAADGR----------IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 241
GR + + G+ + +A D L + ++ R +
Sbjct: 90 -----LPVPFEVILGRPTEPDDPEILLEVADGL-GLSSANDVDLEDILELLRRRGKLFAI 143
Query: 242 HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301
H +E + +T +++ L+ +LL H + ++ L+ GV V
Sbjct: 144 HASE------------TRESVGMTDIERALDLEPDLL-VHGTHLTDEDLELVRENGVPVV 190
Query: 302 HCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFAN 360
CP S + +G P+ E+L I V LGTD N + EM + ++ +
Sbjct: 191 LCPRSNLYFGVGIPPVAELLKLGIKVLLGTDNVMVNE-PDMWAEMEFLAKYSRLQ----- 244
Query: 361 GTTDPAALPAETVLRMATINGAK 383
L +LRMAT+N A+
Sbjct: 245 -----GYLSPLEILRMATVNAAE 262
|
These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases. Length = 263 |
| >gnl|CDD|221936 pfam13147, Amidohydro_4, Amidohydrolase | Back alignment and domain information |
|---|
Score = 56.4 bits (135), Expect = 7e-09
Identities = 59/334 (17%), Positives = 108/334 (32%), Gaps = 42/334 (12%)
Query: 72 DLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDR------IWPYESNMTEEDSYI 125
D + +++LPG V+ HVH + + E +
Sbjct: 1 DAKGRLVLPGLVDLHVHGRPLDKSEDGGPYRAEAEAGLAALAGAGVTSALLDGGWEPELL 60
Query: 126 STLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRT 185
+ LL + + A + + + + +E G+ L L
Sbjct: 61 TRLLVRVLVDGLIGLGNLGATLEALKRLVELLEAEGVALPL-------ASVLDGPGLEAL 113
Query: 186 TDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMN-ATDRLLLETRDMAREFKTGIHMHVA 244
+ ++ L H A G + G+ + A + E +A G + +
Sbjct: 114 LREAKKAGLILLVGHAPADLGDGAVEKGLDALFLLALGHEVAEDLHLAEILDPGAGLGLH 173
Query: 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCP 304
I ++++ H V + + AGV P
Sbjct: 174 VIAAAADLLLEGLVAAHAG----------------GLAVVPLELLLRDAAAAGVAFKVLP 217
Query: 305 ASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTD 364
+R ++E+L A + V+LG+D AP + L+ + A
Sbjct: 218 PLRLRERDREALRELLAAGVPVALGSDHAPDSPAGP-------GDLLEAALFLAAL---- 266
Query: 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398
A L E LR+AT+N A+ + +D+G LE GK
Sbjct: 267 -AGLTPEEALRLATLNPARLLGLGDDLGRLEVGK 299
|
This family of enzymes are a part of a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included. Length = 304 |
| >gnl|CDD|224490 COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Score = 57.0 bits (138), Expect = 8e-09
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
++ +ILHN I TMD+ V + RI A+G A++ A ++IDL+ +
Sbjct: 4 AADLILHNGRIYTMDEARPTAE--AVAIKDGRIVAVGSDAELKALAGP-ATEVIDLKGKF 60
Query: 78 LLPGFVNTHVH 88
+LPGFV+ H+H
Sbjct: 61 VLPGFVDAHLH 71
|
Length = 535 |
| >gnl|CDD|236478 PRK09356, PRK09356, imidazolonepropionase; Validated | Back alignment and domain information |
|---|
Score = 53.6 bits (130), Expect = 6e-08
Identities = 17/75 (22%), Positives = 36/75 (48%), Gaps = 7/75 (9%)
Query: 18 SSTMILHNAVIVTMDKESR----VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDL 73
+ ++ NA + TMD + +G + + +I +G AD+ + A ++ID
Sbjct: 2 MADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLP---AAYAAEVIDA 58
Query: 74 QSQILLPGFVNTHVH 88
+++ PG ++ H H
Sbjct: 59 GGKLVTPGLIDCHTH 73
|
Length = 406 |
| >gnl|CDD|235969 PRK07213, PRK07213, chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 1e-06
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSA 280
+D L + K +H AE ++ V K + L + F + ++
Sbjct: 177 SDEELKFICKECKREKKIFSIHAAE--HKGSVEYSLEKYGMTEIERLINLGFKPDFIV-- 232
Query: 281 HTVWVNHTEIGLLSRAGVKVSHCP-ASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRM 339
H ++ ++ LL + V CP A+A +G P+ EML I + +GTD N M
Sbjct: 233 HATHPSNDDLELLKENNIPVVVCPRANASFNVGLPPLNEMLEKGILLGIGTD-----NFM 287
Query: 340 ----SIVDEM-YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 394
SI EM ++ L + + + +L+MATINGAK + N G +
Sbjct: 288 ANSPSIFREMEFIYKLYH---------------IEPKEILKMATINGAKILGLINV-GLI 331
Query: 395 EAGKK 399
E G K
Sbjct: 332 EEGFK 336
|
Length = 375 |
| >gnl|CDD|238625 cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases | Back alignment and domain information |
|---|
Score = 49.2 bits (118), Expect = 2e-06
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 8/93 (8%)
Query: 309 RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMY-LASLIN-KGREVFANGTTDPA 366
R P + +L A + V+LG+D AP ++ D + + + + K G +
Sbjct: 388 RAKRSYPFRSLLDAGVPVALGSD-AP----VAPPDPLLGIWAAVTRKTPGGGVLGNPE-E 441
Query: 367 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
L E LR TI A ++ +++ GSLE GK
Sbjct: 442 RLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKL 474
|
YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling. Length = 479 |
| >gnl|CDD|222250 pfam13594, Amidohydro_5, Amidohydrolase | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 2e-06
Identities = 12/58 (20%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100
+ + +I AIG ++ID + + +LPG ++ HVH ++ + +
Sbjct: 1 ILIEDGKIAAIGGDDLP-----DAEAEVIDAEGKYVLPGLIDMHVHLGEEPGRETLET 53
|
This family of enzymes are a part of a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included. Length = 66 |
| >gnl|CDD|233688 TIGR02022, hutF, formiminoglutamate deiminase | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 3e-06
Identities = 74/364 (20%), Positives = 126/364 (34%), Gaps = 60/364 (16%)
Query: 73 LQSQILLPGFVNTHVHTSQQLAKGIADDV-----DLMTWLHDRIWPYESNMTEEDSYIST 127
S LLPG N H H Q+ G+A+ TW + ++ + +T E
Sbjct: 43 RLSGPLLPGLANLHSHAFQRAMAGLAEVAGSGGDSFWTW-RELMYRFADRLTPEQLQAIA 101
Query: 128 LLCGIELIHSGVTCFAE--------AGGQH--VSEMA----KAVELLGLRACLVQ---ST 170
+E++ +G T E G + +EMA A G+ L+ +
Sbjct: 102 RQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADAGIGLTLLPVFYAH 161
Query: 171 MDCGEGLPASWAVR----TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLL 226
G G + R + + + L + AA + + A L
Sbjct: 162 SGFG-GAAPNPGQRRFIHDPERFARLVEVL--RRTLAAQPGAVLGLAPHSL-RAVTPEQL 217
Query: 227 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLL------SA 280
A + + +H+HVAE E D G +E+L ++
Sbjct: 218 AAVLQASDRQAPVHIHVAEQQKEV----DDCLAWSG----RRPVEWLLDHGPVDARWCLV 269
Query: 281 HTVWVNHTEIGLLSRAGVKVSHCPASAMRML--GFAPIKEMLHADICVSLGTDGAPSNNR 338
H + E LL+++G CP + L G P + A +G+D S+
Sbjct: 270 HATHLTDEETKLLAKSGAVAGLCPTTE-ANLGDGIFPAVDFAAAGGRFGIGSD---SHVL 325
Query: 339 MSIVDEM----YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 394
+ + +E+ Y L ++ R V A G P + A + GA+++ G L
Sbjct: 326 IDVAEELRQLEYGQRLRDRARNVLAAG---PGPSVGRALYDAALLGGAQALGR--ATGGL 380
Query: 395 EAGK 398
AG
Sbjct: 381 RAGA 384
|
In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate [Energy metabolism, Amino acids and amines]. Length = 454 |
| >gnl|CDD|238434 cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 3e-06
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 20/134 (14%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA I+T +G V V +I AIG ++ + AD+IIDL+ Q L+P
Sbjct: 1 LIIKNARILTPGGL----EDGAVLVEDGKIVAIGPEDEL-----EEADEIIDLKGQYLVP 51
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEE--DSYISTLL-CGIELIHS 137
GF++ H+H G D M + + + + S++ T + E I
Sbjct: 52 GFIDIHIH-------GGG-GADFMDGTAEALKTIAEALAKHGTTSFLPTTVTAPPEEIAK 103
Query: 138 GVTCFAEAGGQHVS 151
+ AEA +
Sbjct: 104 ALAAIAEAIAEGQG 117
|
This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling. Length = 374 |
| >gnl|CDD|238621 cd01296, Imidazolone-5PH, Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 20/114 (17%)
Query: 290 IGLLSRAGVKVSHCPASA-MRMLGFAPIKEMLHADICVSLGTD---GAPSNNRMSIVDEM 345
I L+ AG P +A + P ++++ A + V+LGTD G+ + M +V M
Sbjct: 244 IAALAEAGTVAVLLPGTAFSLRETYPPARKLIDAGVPVALGTDFNPGSSPTSSMPLV--M 301
Query: 346 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
+LA + + + E L ATIN A ++ +GSLE GK+
Sbjct: 302 HLACRLMR--------------MTPEEALTAATINAAAALGLGETVGSLEVGKQ 341
|
In bacteria, the enzyme is part of histidine utilization (hut) operon. Length = 371 |
| >gnl|CDD|238625 cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 2e-05
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 42 GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88
V V RI A+G A+ A ++IDL+ + +LPGF+++H H
Sbjct: 1 AVAVRDGRIVAVGSDAEAKA-LKGPATEVIDLKGKTVLPGFIDSHSH 46
|
YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling. Length = 479 |
| >gnl|CDD|224490 COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 4e-05
Identities = 24/93 (25%), Positives = 37/93 (39%), Gaps = 9/93 (9%)
Query: 309 RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMY-LASLIN-KGREVFANGTTDPA 366
R P + +L A + ++ G+D AP + D + + + K G
Sbjct: 413 RASRSYPFRSLLKAGVPLAGGSD-AP----VEPYDPWLGIYAAVTRKTPGGRVLGPE--E 465
Query: 367 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
L E LR T GA + + + GSLE GK
Sbjct: 466 RLTREEALRAYTEGGAYASGAEGEKGSLEPGKL 498
|
Length = 535 |
| >gnl|CDD|181419 PRK08418, PRK08418, chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 5e-05
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87
I T D+ + +G V V D+I IG ++ +++ +I ++ +LLP F+N H
Sbjct: 9 IFTCDENFEILEDGAV-VFDDKILEIGDYENLKKKYPNA--KIQFFKNSVLLPAFINPHT 65
Query: 88 H 88
H
Sbjct: 66 H 66
|
Length = 408 |
| >gnl|CDD|223122 COG0044, PyrC, Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 8e-05
Identities = 17/69 (24%), Positives = 34/69 (49%), Gaps = 9/69 (13%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
+++ NA +V ++ + + +I AIG++ + +IID + ++L
Sbjct: 2 DLLIKNARVVDPGEDEV----ADILIKDGKIAAIGKNLEP-----TSGAEIIDAKGLLVL 52
Query: 80 PGFVNTHVH 88
PG V+ HVH
Sbjct: 53 PGLVDLHVH 61
|
Length = 430 |
| >gnl|CDD|224733 COG1820, NagA, N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 43.0 bits (102), Expect = 2e-04
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
L N I T V G V + +I+A+ + +IIDL+ +L+
Sbjct: 1 MYALKNGRIFT---GHGVLDGGAVVIEDGKIEAVVPAELP------ADAEIIDLKGALLV 51
Query: 80 PGFVNTHVH 88
PGF++ H+H
Sbjct: 52 PGFIDLHIH 60
|
Length = 380 |
| >gnl|CDD|236479 PRK09357, pyrC, dihydroorotase; Validated | Back alignment and domain information |
|---|
Score = 42.5 bits (101), Expect = 3e-04
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
Query: 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88
V + +I AIG++ + ++ID ++ PG V+ HVH
Sbjct: 22 VLIDDGKIAAIGENIEAE------GAEVIDATGLVVAPGLVDLHVH 61
|
Length = 423 |
| >gnl|CDD|181716 PRK09236, PRK09236, dihydroorotase; Reviewed | Back alignment and domain information |
|---|
Score = 41.4 bits (98), Expect = 6e-04
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 10/71 (14%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
+I NA IV E ++F G V + RI I S AD +ID +
Sbjct: 2 KRILI-KNARIVN---EGKIFE-GDVLIENGRIAKIASSISAKS-----ADTVIDAAGRY 51
Query: 78 LLPGFVNTHVH 88
LLPG ++ VH
Sbjct: 52 LLPGMIDDQVH 62
|
Length = 444 |
| >gnl|CDD|184033 PRK13404, PRK13404, dihydropyrimidinase; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 7e-04
Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 13/81 (16%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
++ +VT + F+ + + RI A+G+ + ID +++LPG
Sbjct: 7 VIRGGTVVTA---TDTFQ-ADIGIRGGRIAALGEGLG-------PGAREIDATGRLVLPG 55
Query: 82 FVNTHVHTSQQLAKGI--ADD 100
V++H H Q GI ADD
Sbjct: 56 GVDSHCHIDQPSGDGIMMADD 76
|
Length = 477 |
| >gnl|CDD|236478 PRK09356, PRK09356, imidazolonepropionase; Validated | Back alignment and domain information |
|---|
Score = 40.9 bits (97), Expect = 8e-04
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 21/91 (23%)
Query: 313 FAPIKEMLHADICVSLGTD---G-APSNNRMSIVDEMYLASLINKGREVFANGTTDPAAL 368
+ P + + A + V+L TD G +P+ + + + M +A + + L
Sbjct: 298 YPPARLLRDAGVPVALATDFNPGSSPTES-LLLA--MNMACTLFR--------------L 340
Query: 369 PAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
E L TIN A+++ + GSLE GKK
Sbjct: 341 TPEEALAAVTINAARALGRQDTHGSLEVGKK 371
|
Length = 406 |
| >gnl|CDD|237604 PRK14085, PRK14085, imidazolonepropionase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 10/76 (13%)
Query: 18 SSTMILHNAVIVTMDKE-----SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIID 72
ST+I + +VT D E V R+ V V R+ +G +AD + AD+ +D
Sbjct: 1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAAD-----APAADERVD 55
Query: 73 LQSQILLPGFVNTHVH 88
+ +LPGFV++H H
Sbjct: 56 AGGRAVLPGFVDSHSH 71
|
Length = 382 |
| >gnl|CDD|237967 PRK15446, PRK15446, phosphonate metabolism protein PhnM; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.001
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 11/69 (15%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
MIL NA +V V +G + + RI AI A S + ID +
Sbjct: 1 MMEMILSNARLVL---PDEVV-DGSLLIEDGRIAAIDPGA------SALP-GAIDAEGDY 49
Query: 78 LLPGFVNTH 86
LLPG V+ H
Sbjct: 50 LLPGLVDLH 58
|
Length = 383 |
| >gnl|CDD|182623 PRK10657, PRK10657, isoaspartyl dipeptidase; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (95), Expect = 0.001
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88
+ + +I AI + +I + ++ID +IL+PGF++ HVH
Sbjct: 21 ILIAGGKIIAIADNINIPDIVPDI--EVIDASGKILVPGFIDQHVH 64
|
Length = 388 |
| >gnl|CDD|238621 cd01296, Imidazolone-5PH, Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate | Back alignment and domain information |
|---|
Score = 39.9 bits (94), Expect = 0.002
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88
+ + RI A+G +A L A + ID + + PG V+ H H
Sbjct: 1 IAIRDGRIAAVGPAAS-LPAPGPAAAEEIDAGGRAVTPGLVDCHTH 45
|
In bacteria, the enzyme is part of histidine utilization (hut) operon. Length = 371 |
| >gnl|CDD|180337 PRK05985, PRK05985, cytosine deaminase; Provisional | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.002
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 13/61 (21%)
Query: 36 RVFRN----GG----VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87
+FRN GG + + RI AIG + + ++ D + LPG V+ H+
Sbjct: 4 LLFRNVRPAGGAAVDILIRDGRIAAIGPALA-----APPGAEVEDGGGALALPGLVDGHI 58
Query: 88 H 88
H
Sbjct: 59 H 59
|
Length = 391 |
| >gnl|CDD|233321 TIGR01224, hutI, imidazolonepropionase | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.002
Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 20/122 (16%)
Query: 281 HTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN-- 337
H + I L+ AG P + + + P ++++ + V+L TD P ++
Sbjct: 239 HLEHASDAGIKALAEAGTVAVLLPGTTFYLRETYPPARQLIDYGVPVALATDLNPGSSPT 298
Query: 338 -RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEA 396
M ++ M LA + K + E L AT+N A ++ + G+LEA
Sbjct: 299 LSMQLI--MSLACRLMK--------------MTPEEALHAATVNAAYALGLGEERGTLEA 342
Query: 397 GK 398
G+
Sbjct: 343 GR 344
|
This enzyme catalyzes the third step in histidine degradation [Energy metabolism, Amino acids and amines]. Length = 377 |
| >gnl|CDD|163175 TIGR03178, allantoinase, allantoinase | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ ++ + E V V +I AIG DIL A +IID ++ P
Sbjct: 2 LIIRGGRVILPNGEREA----DVGVKGGKIAAIGP--DILGP----AAKIIDAGGLVVFP 51
Query: 81 GFVNTHVHTSQ 91
G V+THVH ++
Sbjct: 52 GVVDTHVHINE 62
|
This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases. Length = 443 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 400 | |||
| PRK15493 | 435 | 5-methylthioadenosine/S-adenosylhomocysteine deami | 100.0 | |
| PRK06687 | 419 | chlorohydrolase; Validated | 100.0 | |
| PRK09045 | 443 | N-ethylammeline chlorohydrolase; Provisional | 100.0 | |
| TIGR03314 | 441 | Se_ssnA putative selenium metabolism protein SsnA. | 100.0 | |
| PRK07228 | 445 | N-ethylammeline chlorohydrolase; Provisional | 100.0 | |
| PRK07203 | 442 | putative chlorohydrolase/aminohydrolase; Validated | 100.0 | |
| cd01303 | 429 | GDEase Guanine deaminase (GDEase). Guanine deamina | 100.0 | |
| PRK12393 | 457 | amidohydrolase; Provisional | 100.0 | |
| PRK09228 | 433 | guanine deaminase; Provisional | 100.0 | |
| PRK06038 | 430 | N-ethylammeline chlorohydrolase; Provisional | 100.0 | |
| PRK08203 | 451 | hydroxydechloroatrazine ethylaminohydrolase; Revie | 100.0 | |
| PRK06380 | 418 | metal-dependent hydrolase; Provisional | 100.0 | |
| PRK08418 | 408 | chlorohydrolase; Provisional | 100.0 | |
| PRK08204 | 449 | hypothetical protein; Provisional | 100.0 | |
| TIGR02967 | 401 | guan_deamin guanine deaminase. This model describe | 100.0 | |
| PRK08393 | 424 | N-ethylammeline chlorohydrolase; Provisional | 100.0 | |
| cd01298 | 411 | ATZ_TRZ_like TRZ/ATZ family contains enzymes from | 100.0 | |
| cd01312 | 381 | Met_dep_hydrolase_D Metallo-dependent hydrolases, | 100.0 | |
| COG0402 | 421 | SsnA Cytosine deaminase and related metal-dependen | 100.0 | |
| cd01313 | 418 | Met_dep_hydrolase_E Metallo-dependent hydrolases, | 100.0 | |
| PRK06151 | 488 | N-ethylammeline chlorohydrolase; Provisional | 100.0 | |
| PRK09229 | 456 | N-formimino-L-glutamate deiminase; Validated | 100.0 | |
| TIGR02022 | 455 | hutF formiminoglutamate deiminase. In some species | 100.0 | |
| KOG3968 | 439 | consensus Atrazine chlorohydrolase/guanine deamina | 100.0 | |
| PRK07213 | 375 | chlorohydrolase; Provisional | 100.0 | |
| PRK09356 | 406 | imidazolonepropionase; Validated | 100.0 | |
| cd01293 | 398 | Bact_CD Bacterial cytosine deaminase and related m | 100.0 | |
| PRK09230 | 426 | cytosine deaminase; Provisional | 100.0 | |
| PRK14085 | 382 | imidazolonepropionase; Provisional | 100.0 | |
| TIGR01224 | 377 | hutI imidazolonepropionase. This enzyme catalyzes | 100.0 | |
| PRK07572 | 426 | cytosine deaminase; Validated | 100.0 | |
| COG1574 | 535 | Predicted metal-dependent hydrolase with the TIM-b | 100.0 | |
| cd01296 | 371 | Imidazolone-5PH Imidazolonepropionase/imidazolone- | 100.0 | |
| cd01314 | 447 | D-HYD D-hydantoinases (D-HYD) also called dihydrop | 100.0 | |
| PLN02942 | 486 | dihydropyrimidinase | 100.0 | |
| PRK05985 | 391 | cytosine deaminase; Provisional | 100.0 | |
| TIGR02033 | 454 | D-hydantoinase D-hydantoinase. This model represen | 100.0 | |
| COG1228 | 406 | HutI Imidazolonepropionase and related amidohydrol | 100.0 | |
| PRK07583 | 438 | cytosine deaminase-like protein; Validated | 100.0 | |
| PRK12394 | 379 | putative metallo-dependent hydrolase; Provisional | 100.0 | |
| PRK08323 | 459 | phenylhydantoinase; Validated | 100.0 | |
| cd01299 | 342 | Met_dep_hydrolase_A Metallo-dependent hydrolases, | 100.0 | |
| cd01300 | 479 | YtcJ_like YtcJ_like metal dependent amidohydrolase | 99.97 | |
| cd01305 | 263 | archeal_chlorohydrolases Predicted chlorohydrolase | 99.97 | |
| TIGR01975 | 389 | isoAsp_dipep isoaspartyl dipeptidase IadA. The L-i | 99.97 | |
| PRK06846 | 410 | putative deaminase; Validated | 99.97 | |
| PRK10657 | 388 | isoaspartyl dipeptidase; Provisional | 99.97 | |
| PRK15446 | 383 | phosphonate metabolism protein PhnM; Provisional | 99.96 | |
| PRK09357 | 423 | pyrC dihydroorotase; Validated | 99.96 | |
| cd01297 | 415 | D-aminoacylase D-aminoacylases (N-acyl-D-Amino aci | 99.96 | |
| TIGR01792 | 567 | urease_alph urease, alpha subunit. This model desc | 99.96 | |
| PRK13309 | 572 | ureC urease subunit alpha; Reviewed | 99.96 | |
| PRK13207 | 568 | ureC urease subunit alpha; Reviewed | 99.96 | |
| PRK13206 | 573 | ureC urease subunit alpha; Reviewed | 99.95 | |
| PRK13404 | 477 | dihydropyrimidinase; Provisional | 99.95 | |
| TIGR02318 | 376 | phosphono_phnM phosphonate metabolism protein PhnM | 99.95 | |
| PRK09237 | 380 | dihydroorotase; Provisional | 99.95 | |
| cd01315 | 447 | L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinas | 99.95 | |
| PLN02303 | 837 | urease | 99.95 | |
| cd01309 | 359 | Met_dep_hydrolase_C Metallo-dependent hydrolases, | 99.95 | |
| TIGR03178 | 443 | allantoinase allantoinase. This enzyme carries out | 99.95 | |
| PLN02795 | 505 | allantoinase | 99.95 | |
| PRK13985 | 568 | ureB urease subunit beta; Provisional | 99.95 | |
| PRK07627 | 425 | dihydroorotase; Provisional | 99.95 | |
| PRK09236 | 444 | dihydroorotase; Reviewed | 99.94 | |
| PRK06189 | 451 | allantoinase; Provisional | 99.94 | |
| PRK07575 | 438 | dihydroorotase; Provisional | 99.94 | |
| TIGR01178 | 552 | ade adenine deaminase. The family described by thi | 99.94 | |
| cd00375 | 567 | Urease_alpha Urease alpha-subunit; Urease is a nic | 99.94 | |
| cd00854 | 374 | NagA N-acetylglucosamine-6-phosphate deacetylase, | 99.94 | |
| KOG2584 | 522 | consensus Dihydroorotase and related enzymes [Nucl | 99.94 | |
| PRK13308 | 569 | ureC urease subunit alpha; Reviewed | 99.94 | |
| COG1820 | 380 | NagA N-acetylglucosamine-6-phosphate deacetylase [ | 99.94 | |
| PRK07369 | 418 | dihydroorotase; Provisional | 99.93 | |
| PRK02382 | 443 | dihydroorotase; Provisional | 99.93 | |
| TIGR00221 | 380 | nagA N-acetylglucosamine-6-phosphate deacetylase. | 99.93 | |
| cd01307 | 338 | Met_dep_hydrolase_B Metallo-dependent hydrolases, | 99.93 | |
| cd01308 | 387 | Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hy | 99.93 | |
| COG3964 | 386 | Predicted amidohydrolase [General function predict | 99.93 | |
| COG0044 | 430 | PyrC Dihydroorotase and related cyclic amidohydrol | 99.92 | |
| COG1001 | 584 | AdeC Adenine deaminase [Nucleotide transport and m | 99.92 | |
| PRK11170 | 382 | nagA N-acetylglucosamine-6-phosphate deacetylase; | 99.92 | |
| PRK08044 | 449 | allantoinase; Provisional | 99.92 | |
| PF01979 | 333 | Amidohydro_1: Amidohydrolase family; InterPro: IPR | 99.92 | |
| PRK10027 | 588 | cryptic adenine deaminase; Provisional | 99.92 | |
| PRK09061 | 509 | D-glutamate deacylase; Validated | 99.92 | |
| PRK09060 | 444 | dihydroorotase; Validated | 99.91 | |
| PRK08417 | 386 | dihydroorotase; Provisional | 99.91 | |
| PRK09059 | 429 | dihydroorotase; Validated | 99.91 | |
| PRK06886 | 329 | hypothetical protein; Validated | 99.91 | |
| TIGR00857 | 411 | pyrC_multi dihydroorotase, multifunctional complex | 99.91 | |
| TIGR03583 | 365 | EF_0837 probable amidohydrolase EF_0837/AHA_3915. | 99.9 | |
| COG3454 | 377 | Metal-dependent hydrolase involved in phosphonate | 99.89 | |
| TIGR03121 | 556 | one_C_dehyd_A formylmethanofuran dehydrogenase sub | 99.88 | |
| cd01317 | 374 | DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; | 99.87 | |
| cd01304 | 541 | FMDH_A Formylmethanofuran dehydrogenase (FMDH) sub | 99.86 | |
| cd01292 | 275 | metallo-dependent_hydrolases Superfamily of metall | 99.85 | |
| PRK01211 | 409 | dihydroorotase; Provisional | 99.85 | |
| PF07969 | 404 | Amidohydro_3: Amidohydrolase family; InterPro: IPR | 99.84 | |
| PRK04250 | 398 | dihydroorotase; Provisional | 99.84 | |
| cd01320 | 325 | ADA Adenosine deaminase (ADA) is a monomeric zinc | 99.83 | |
| PRK09358 | 340 | adenosine deaminase; Provisional | 99.82 | |
| cd01295 | 422 | AdeC Adenine deaminase (AdeC) directly deaminates | 99.82 | |
| PRK00369 | 392 | pyrC dihydroorotase; Provisional | 99.81 | |
| TIGR01430 | 324 | aden_deam adenosine deaminase. This family include | 99.81 | |
| COG0804 | 568 | UreC Urea amidohydrolase (urease) alpha subunit [A | 99.8 | |
| cd01302 | 337 | Cyclic_amidohydrolases Cyclic amidohydrolases, inc | 99.79 | |
| cd01306 | 325 | PhnM PhnM is believed to be a subunit of the membr | 99.76 | |
| PF13147 | 304 | Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2 | 99.76 | |
| COG1229 | 575 | FwdA Formylmethanofuran dehydrogenase subunit A [E | 99.75 | |
| cd01318 | 361 | DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; | 99.75 | |
| KOG3892 | 407 | consensus N-acetyl-glucosamine-6-phosphate deacety | 99.69 | |
| PF13594 | 68 | Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1 | 99.59 | |
| COG3653 | 579 | N-acyl-D-aspartate/D-glutamate deacylase [Secondar | 99.56 | |
| cd01294 | 335 | DHOase Dihydroorotase (DHOase) catalyzes the rever | 99.46 | |
| cd00443 | 305 | ADA_AMPD Adenosine/AMP deaminase. Adenosine deamin | 99.43 | |
| cd01316 | 344 | CAD_DHOase The eukaryotic CAD protein is a trifunc | 99.29 | |
| cd00530 | 293 | PTE Phosphotriesterase (PTE) catalyzes the hydroly | 99.28 | |
| PTZ00124 | 362 | adenosine deaminase; Provisional | 99.28 | |
| cd01321 | 345 | ADGF Adenosine deaminase-related growth factors (A | 99.18 | |
| PRK09875 | 292 | putative hydrolase; Provisional | 99.05 | |
| TIGR00010 | 252 | hydrolase, TatD family. Several genomes have multi | 99.05 | |
| PF00962 | 331 | A_deaminase: Adenosine/AMP deaminase immunodeficie | 99.02 | |
| cd01310 | 251 | TatD_DNAse TatD like proteins; E.coli TatD is a cy | 99.02 | |
| PRK05451 | 345 | dihydroorotase; Provisional | 98.97 | |
| COG1816 | 345 | Add Adenosine deaminase [Nucleotide transport and | 98.94 | |
| PLN02599 | 364 | dihydroorotase | 98.84 | |
| PRK10812 | 265 | putative DNAse; Provisional | 98.65 | |
| COG1099 | 254 | Predicted metal-dependent hydrolases with the TIM- | 98.64 | |
| PRK11449 | 258 | putative deoxyribonuclease YjjV; Provisional | 98.63 | |
| PF02126 | 308 | PTE: Phosphotriesterase family; InterPro: IPR00155 | 98.55 | |
| TIGR00856 | 341 | pyrC_dimer dihydroorotase, homodimeric type. This | 98.55 | |
| COG0084 | 256 | TatD Mg-dependent DNase [DNA replication, recombin | 98.53 | |
| KOG1097 | 399 | consensus Adenine deaminase/adenosine deaminase [N | 98.52 | |
| COG1735 | 316 | Php Predicted metal-dependent hydrolase with the T | 98.49 | |
| TIGR01431 | 479 | adm_rel adenosine deaminase-related growth factor. | 98.49 | |
| PRK10425 | 258 | DNase TatD; Provisional | 98.43 | |
| PF01026 | 255 | TatD_DNase: TatD related DNase The Pfam entry find | 98.29 | |
| PLN03055 | 602 | AMP deaminase; Provisional | 97.54 | |
| PRK06361 | 212 | hypothetical protein; Provisional | 97.49 | |
| TIGR01429 | 611 | AMP_deaminase AMP deaminase. This model describes | 97.49 | |
| cd01319 | 496 | AMPD AMP deaminase (AMPD) catalyzes the hydrolytic | 97.37 | |
| cd01311 | 263 | PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) | 97.36 | |
| PLN02768 | 835 | AMP deaminase | 97.27 | |
| PF00449 | 121 | Urease_alpha: Urease alpha-subunit, N-terminal dom | 97.24 | |
| PTZ00310 | 1453 | AMP deaminase; Provisional | 97.13 | |
| PTZ00310 | 1453 | AMP deaminase; Provisional | 96.43 | |
| COG2159 | 293 | Predicted metal-dependent hydrolase of the TIM-bar | 95.7 | |
| PF04909 | 273 | Amidohydro_2: Amidohydrolase; InterPro: IPR006992 | 95.36 | |
| KOG3020 | 296 | consensus TatD-related DNase [Replication, recombi | 95.05 | |
| COG3618 | 279 | Predicted metal-dependent hydrolase of the TIM-bar | 94.68 | |
| PF12890 | 142 | DHOase: Dihydro-orotase-like; InterPro: IPR024403 | 93.64 | |
| PRK07945 | 335 | hypothetical protein; Provisional | 92.96 | |
| PRK00912 | 237 | ribonuclease P protein component 3; Provisional | 92.77 | |
| COG1387 | 237 | HIS2 Histidinol phosphatase and related hydrolases | 91.56 | |
| COG0418 | 344 | PyrC Dihydroorotase [Nucleotide transport and meta | 90.65 | |
| cd01301 | 309 | rDP_like renal dipeptidase (rDP), best studied in | 84.97 | |
| PRK06740 | 331 | histidinol-phosphatase; Validated | 84.26 | |
| COG1831 | 285 | Predicted metal-dependent hydrolase (urease superf | 83.71 | |
| PRK08609 | 570 | hypothetical protein; Provisional | 83.2 | |
| COG1603 | 229 | RPP1 RNase P/RNase MRP subunit p30 [Translation, r | 82.64 |
| >PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-52 Score=389.64 Aligned_cols=361 Identities=31% Similarity=0.463 Sum_probs=307.9
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|++.+....++++++|+|+||+|++||+..... ..++.++||++|++|||||||+|+|+.++.+++...
T Consensus 2 ~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~---~~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~~ 78 (435)
T PRK15493 2 KTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFAS---DFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIGD 78 (435)
T ss_pred eEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccc---cCCCCeEEeCCCCEEccceeecccCccchhhhccCC
Confidence 58999999999877667889999999999999999853211 112468999999999999999999999999999988
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---CCHHHHHHHHHHcCCeEEEecccccCCCC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEG 176 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (400)
+.++.+|+...+|+....+++++.+..++..+.+++++|+||+.|+.. .......+++.+.|+|..++...++.+.
T Consensus 79 ~~~l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~~~~- 157 (435)
T PRK15493 79 DMLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFNPIGVDQDAIMETVSRSGMRAAVSRTLFSFGT- 157 (435)
T ss_pred CCCHHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEccccccccCHHHHHHHHHHcCCcEEEeeeecCCCC-
Confidence 889999999899998888999999999999999999999999999752 2346677888999999988877665431
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
+. .....+....+.++++... .+.++...+++.+++++++.++++.+.|+++|+++++|+.|+..+.+.+.+.
T Consensus 158 -~~-----~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~ 230 (435)
T PRK15493 158 -KE-----DEKKAIEEAEKYVKRYYNE-SGMLTTMVAPHSPYTCSTELLEECARIAVENQTMVHIHLSETEREVRDIEAQ 230 (435)
T ss_pred -Cc-----cHHHHHHHHHHHHHHhcCC-CCCeEEEEeCCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHH
Confidence 11 1234455566666666542 3578888999999999999999999999999999999999999888888777
Q ss_pred cCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCC
Q 015784 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPS 335 (400)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~ 335 (400)
++. .+++++.+.|+++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++|+++++|||+..+
T Consensus 231 ~g~--~~~~~l~~~Gll~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~~ 308 (435)
T PRK15493 231 YGK--RPVEYAASCGLFKRPTVIAHGVVLNDNERAFLAEHDVRVAHNPNSNLKLGSGIANVKAMLEAGIKVGIATDSVAS 308 (435)
T ss_pred hCC--CHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCeEEEChHHHHHHhcCcccHHHHHHCCCeEEEccCcccc
Confidence 764 4899999999999999999999999999999999999999999999988 8899999999999999999999777
Q ss_pred CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 336 NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++.+++.+|+.+....+... ..+..++++++++++|.+||+++|+++ +|+|++||.|
T Consensus 309 ~~~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~~-~G~l~~G~~A 366 (435)
T PRK15493 309 NNNLDMFEEMRIATLLQKGIH------QDATALPVETALTLATKGAAEVIGMKQ-TGSLEVGKCA 366 (435)
T ss_pred CCCcCHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCCC-CCccCCCCcC
Confidence 678899999998877665321 123468999999999999999999974 7999999987
|
|
| >PRK06687 chlorohydrolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-52 Score=387.57 Aligned_cols=361 Identities=29% Similarity=0.476 Sum_probs=307.0
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
.+|+|++|+++++...++++++|+|+||+|++||+..+.. .....++||++|++|||||||+|+|+.++.+++...+
T Consensus 2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~---~~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~ 78 (419)
T PRK06687 2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAF---LEQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDD 78 (419)
T ss_pred cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCccccc---ccccCeEEeCCCCEEccceeeeccCCCccccccccCC
Confidence 3799999999987777889999999999999999864321 1124689999999999999999999999999998878
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---CCHHHHHHHHHHcCCeEEEecccccCCCCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (400)
.++.+|+..++|+....+++++.+..++..+.++++.|+||+.++.. .......+++.+.|+|..+++..+....
T Consensus 79 ~~~~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~~~~~~~~~~~~~a~~~~Gir~~~~~~~~~~~~-- 156 (419)
T PRK06687 79 SNLHEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMYNPNGVDIQQIYQVVKTSKMRCYFSPTLFSSET-- 156 (419)
T ss_pred CCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhhccccccHHHHHHHHHHhCCceEeccccccCCc--
Confidence 89999999999998888888888888888899999999999999752 3456678889999999987665543221
Q ss_pred CcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhc
Q 015784 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (400)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 257 (400)
......+....++++++.....+.+++.++++..+.++++.+.++++.|+++|+++++|+.|+..+.....+.+
T Consensus 157 ------~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~i~~H~~e~~~e~~~~~~~~ 230 (419)
T PRK06687 157 ------ETTAETISRTRSIIDEILKYKNPNFKVMVAPHSPYSCSRDLLEASLEMAKELNIPLHVHVAETKEESGIILKRY 230 (419)
T ss_pred ------ccHHHHHHHHHHHHHHHhccCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHH
Confidence 12334556677777776655556788889999999999999999999999999999999999987777777666
Q ss_pred CCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCC
Q 015784 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN 336 (400)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~ 336 (400)
+. .+++++.+.+.++.+.++.|+.++++++++++++.|+.+++||.+|.++ .+.+|+++|+++|+++++|||+..++
T Consensus 231 g~--~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lGtD~~~~~ 308 (419)
T PRK06687 231 GK--RPLAFLEELGYLDHPSVFAHGVELNEREIERLASSQVAIAHNPISNLKLASGIAPIIQLQKAGVAVGIATDSVASN 308 (419)
T ss_pred Cc--CHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECcHHhhhhccCCCcHHHHHHCCCeEEEeCCCCCCC
Confidence 64 4889999999999999999999999999999999999999999999988 88999999999999999999987776
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++.+++.+|+.+....+... .....++++++|+++|.+||+++|+++++|+|++||.|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~~~~G~l~~G~~A 366 (419)
T PRK06687 309 NNLDMFEEGRTAALLQKMKS------GDASQFPIETALKVLTIEGAKALGMENQIGSLEVGKQA 366 (419)
T ss_pred CChhHHHHHHHHHHHhcccc------CCCccCCHHHHHHHHhHHHHHHcCCCCCCcccCCCccC
Confidence 78899999999876664321 12345899999999999999999999889999999987
|
|
| >PRK09045 N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-49 Score=370.34 Aligned_cols=369 Identities=33% Similarity=0.548 Sum_probs=301.9
Q ss_pred CCCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccc
Q 015784 14 SLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (400)
Q Consensus 14 ~~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~ 93 (400)
+.+.+.+++|+|+.|+++++...++++++|+|+||+|++||+....+..+ .+.++||++|++|||||||+|+|+.++.
T Consensus 2 ~~~~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~--~~~~~iD~~g~~v~PG~id~H~Hl~~~~ 79 (443)
T PRK09045 2 MPMEPVDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARY--AAAETVELPDHVLIPGLINAHTHAAMSL 79 (443)
T ss_pred CCcccccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccC--CcceEEeCCCCEEecCEeccccChhhHh
Confidence 44556789999999999876567889999999999999999865432212 2468999999999999999999999988
Q ss_pred cccccCCCChhHhhhhcccccc-CCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEeccccc
Q 015784 94 AKGIADDVDLMTWLHDRIWPYE-SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
+++...+.++.+|+....|+.. ...++++.+..++..+.++++.|+|++.++. .......+.+.+.|+|...+...++
T Consensus 80 ~~g~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~-~~~~~~~~~~~~~G~R~~~~~~~~~ 158 (443)
T PRK09045 80 LRGLADDLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMY-FFPEAAAEAAHQAGMRAQIGMPVLD 158 (443)
T ss_pred hhhccCCCCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEecc-ccHHHHHHHHHHcCCeEEEeccccc
Confidence 8887777888999988777644 3367788888888899999999999999976 4556667888999999988765554
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhH
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (400)
. +..+ .......+....+..+.+.. .+.+++.+.++..+.++++.++++++.|+++|+++++|+.++..+...
T Consensus 159 ~----~~~~-~~~~~~~l~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 231 (443)
T PRK09045 159 F----PTAW-ASDADEYLAKGLELHDQWRH--HPLISTAFAPHAPYTVSDENLERIRTLAEQLDLPIHIHLHETAQEIAD 231 (443)
T ss_pred C----CCcc-ccCHHHHHHHHHHHHHHhcC--CCcEEEEEeCCCCCCCCHHHHHHHHHHHHHcCCCEEEeecCcHHHHHH
Confidence 2 2111 12234445555566666542 357888889999899999999999999999999999999988776666
Q ss_pred HhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCC
Q 015784 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTD 331 (400)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD 331 (400)
..+.++. .+++++...|+++.+.++.|+.++++++++++++.|+.+++||.+++++ .+..|+++++++|+++++|||
T Consensus 232 ~~~~~g~--~~~~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~i~~~P~~~~~~~~~~~~~~~l~~~Gv~v~lGtD 309 (443)
T PRK09045 232 SLKQHGQ--RPLARLARLGLLGPRLIAVHMTQLTDAEIALLAETGCSVVHCPESNLKLASGFCPVAKLLQAGVNVALGTD 309 (443)
T ss_pred HHHHhCC--CHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEECHHHHhhhccCCCcHHHHHHCCCeEEEecC
Confidence 6655554 4889999999999999999999999999999999999999999998876 678999999999999999999
Q ss_pred CCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 332 GAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++++.+.+++.+++.+....+... ....+++++++|+++|.|||+++|+++++|+|++||.|
T Consensus 310 ~~~~~~~~~~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 372 (443)
T PRK09045 310 GAASNNDLDLFGEMRTAALLAKAVA------GDATALPAHTALRMATLNGARALGLDDEIGSLEPGKQA 372 (443)
T ss_pred CCCCCCCccHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcC
Confidence 9876667889999998765443210 12346899999999999999999999889999999987
|
|
| >TIGR03314 Se_ssnA putative selenium metabolism protein SsnA | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-49 Score=367.84 Aligned_cols=358 Identities=25% Similarity=0.418 Sum_probs=297.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++.++....+++++|+|+||+|++||+..+....+ .+.++||++|++|+|||||+|+|+.++..++...+
T Consensus 1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~--~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d 78 (441)
T TIGR03314 1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKY--PEATFIDAKGKLIMPGFINTHNHFYSTFARGMMAD 78 (441)
T ss_pred CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccC--CCCeEEeCCCCEEecCeeecccchhhhhhcccccc
Confidence 4799999998766555778999999999999999864432212 24589999999999999999999999888887544
Q ss_pred ----CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC------CHHHHHHHHHHcCCeEEEeccc
Q 015784 101 ----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------HVSEMAKAVELLGLRACLVQST 170 (400)
Q Consensus 101 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~ 170 (400)
.++.+|+...+|+....+++++.+..++..+.+++++|+|++.|+... ..+...+++.+.|+|.+++...
T Consensus 79 ~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 158 (441)
T TIGR03314 79 IPPPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYET 158 (441)
T ss_pred CCCCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeee
Confidence 378899999899988889999999999999999999999999997411 2456788899999999888776
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
++.... ......+....++++++....++.++..++++..++.+++.++++.++|+++++++++|+.|+..+.
T Consensus 159 ~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~ 231 (441)
T TIGR03314 159 SDRDGG-------KEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHAPFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDV 231 (441)
T ss_pred ecCCCc-------ccHHHHHHHHHHHHHHhccCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHH
Confidence 653211 1123344555566666665445678888999999999999999999999999999999999999988
Q ss_pred hHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEc
Q 015784 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 329 (400)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~g 329 (400)
+...+.++. .+++++.+.|+++++.++.||.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++||+|++|
T Consensus 232 ~~~~~~~g~--~~~~~l~~~G~l~~~~~~~H~~~~~~~d~~~la~~g~~v~~cP~sn~~l~~G~~p~~~~~~~Gv~v~LG 309 (441)
T TIGR03314 232 EDSHHKYGK--DIVERLADFGLLGSKTLAAHCIYLSDREIELLNETDTFVVHNPESNMGNAVGYNPVLRMFKNGILLGLG 309 (441)
T ss_pred HHHHHHcCC--CHHHHHHHCCCCCCCeEEEEEecCCHHHHHHHHHcCCcEEECHHHHhhhccCCCCHHHHHHCCCEEEEc
Confidence 888887774 5999999999999999999999999999999999999999999999998 8899999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC--CCCCccccccCcCC
Q 015784 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLEAGKKV 400 (400)
Q Consensus 330 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg--~~~~~G~i~~G~~A 400 (400)
||+.. .+++.+|+.+..+.+... ........++++|+|.++|+++| +..++|+|++||.|
T Consensus 310 tD~~~----~d~~~em~~a~~~~~~~~-------~~~~~~~~~~~~~aT~~ga~al~~~l~~~~G~Le~G~~A 371 (441)
T TIGR03314 310 TDGYT----SDMFESLKFANFKHKDAG-------GDLNAAWPESPAMLFENNNEIAERNFGAKFGRLEPGAKA 371 (441)
T ss_pred CCCCC----cCHHHHHHHHHHHhcccc-------CCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcc
Confidence 99853 479999999988775331 11122357899999999999996 45568999999987
|
Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown. |
| >PRK07228 N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-48 Score=367.30 Aligned_cols=367 Identities=38% Similarity=0.627 Sum_probs=302.5
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|+++++. ..+++++|+|+||+|++|++.... ....++||++|++|||||||+|+|+.++..++..
T Consensus 1 ~~~~i~~~~vi~~~~~-~~~~~g~V~I~dg~I~~vg~~~~~-----~~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~ 74 (445)
T PRK07228 1 MTILIKNAGIVTMNAK-REIVDGDVLIEDDRIAAVGDRLDL-----EDYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIA 74 (445)
T ss_pred CeEEEEccEEEecCCC-cEecccEEEEECCEEEEecCCccc-----CcCCeEEeCCCCEEecCEEecccCCccccceecc
Confidence 3589999999997654 356899999999999999985432 1246899999999999999999999988777777
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-CHHHHHHHHHHcCCeEEEecccccCCCCC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGLRACLVQSTMDCGEGL 177 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 177 (400)
.+.++.+|+...+|+....+++++.+..++..+.+++++|+||+.+++.. ......+.+.+.|+|...+...++.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~~- 153 (445)
T PRK07228 75 DDLELLDWLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDMESVHHTDSAFEAAGESGIRAVLGKVMMDYGDD- 153 (445)
T ss_pred CCCCHHHHHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccccccChHHHHHHHHHcCCeEEEecceecCCcC-
Confidence 77889999998888887888999999999999999999999999998632 3567788899999998888777664321
Q ss_pred CcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhc
Q 015784 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (400)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 257 (400)
.+..........+....++++.+.....+.+.....++.....+++.+.++++.|+++|+++++|+.++..+.+.+.+.+
T Consensus 154 ~p~~~~~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~ 233 (445)
T PRK07228 154 VPEGLQEDTEASLAESVRLLEKWHGADNGRIRYAFTPRFAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVEEET 233 (445)
T ss_pred CCccccccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHh
Confidence 11122223445566777777776544344566566777777888999999999999999999999999888777777666
Q ss_pred CCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCC
Q 015784 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN 336 (400)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~ 336 (400)
+. ..++++...+.++.+.+++|+.++++++++++++.|+.+++||.+++.+ .+..|+++++++|+++++|||+++.+
T Consensus 234 g~--~~~~~l~~~g~~~~~~~l~H~~~~~~~~~~~~~~~g~~v~~~P~~~~~~~~~~~p~~~~~~~Gv~v~lGtD~~~~~ 311 (445)
T PRK07228 234 GM--RNIHYLDEVGLTGEDLILAHCVWLDEEEREILAETGTHVTHCPSSNLKLASGIAPVPDLLERGINVALGADGAPCN 311 (445)
T ss_pred CC--CHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCeEEEChHHhhhcccccCcHHHHHHCCCeEEEcCCCCccC
Confidence 54 4789999999999999999999999999999999999999999999887 78899999999999999999987765
Q ss_pred CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 337 NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+..++|.+++.+..+.+... .....++++++|+++|.|||+++|+++++|+|++|+.|
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~------~~~~~~s~~~al~~~T~~~A~~lg~~~~~G~l~~G~~A 369 (445)
T PRK07228 312 NTLDPFTEMRQAALIQKVDR------LGPTAMPARTVFEMATLGGAKAAGFEDEIGSLEEGKKA 369 (445)
T ss_pred CCccHHHHHHHHHHHhhhcc------CCCcccCHHHHHHHHHHHHHHHhCCCCCccccCCCCcc
Confidence 66789999988766553210 11245899999999999999999998888999999987
|
|
| >PRK07203 putative chlorohydrolase/aminohydrolase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-48 Score=365.97 Aligned_cols=358 Identities=26% Similarity=0.424 Sum_probs=296.0
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC-
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD- 99 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~- 99 (400)
++|+|++|++.++...++++++|+|+||+|++||+..+....+ .+.++||++|++|+|||||+|+|+.++..++...
T Consensus 2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~--~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~ 79 (442)
T PRK07203 2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKY--PDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMAN 79 (442)
T ss_pred EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhcccc--CCCeEEeCCCCEEecceeeccccchhhhhcccccc
Confidence 5899999998665545678899999999999999754332211 2458999999999999999999999888887642
Q ss_pred ---CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc------CCHHHHHHHHHHcCCeEEEeccc
Q 015784 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG------QHVSEMAKAVELLGLRACLVQST 170 (400)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~ 170 (400)
..++.+|+...+|+....+++++.+..++..+.+++++|+|++.++.. ...+...+++.+.|+|..++...
T Consensus 80 ~~~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~ 159 (442)
T PRK07203 80 IPPPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYIGGSLFTIADAAKKVGLRAMLCYET 159 (442)
T ss_pred cCCCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccccchHHHHHHHHHHhCCeEEEeccc
Confidence 247889999888998888999999999999999999999999998742 12346678889999999887665
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
.+.+. .......+....++++.+.....+.+...++++..+..+++.++++.++|+++|+++++|+.|+..+.
T Consensus 160 ~d~~~-------~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e~ 232 (442)
T PRK07203 160 SDRDG-------EKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHASFTLSDATLEKCREAVKETGRGYHIHVAEGIYDV 232 (442)
T ss_pred ccCCc-------chhHHHHHHHHHHHHHHhcCCCCCceEEEEccCCCcCcCHHHHHHHHHHHHHcCCcEEEEecCChHHH
Confidence 44320 11123445556666777665545578888999999999999999999999999999999999999998
Q ss_pred hHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEc
Q 015784 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLG 329 (400)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~g 329 (400)
....+.++. .+++++.+.|+++++.++.||.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++||++++|
T Consensus 233 ~~~~~~~g~--~~v~~l~~~Gll~~~~~~~H~~~~~~~d~~~la~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~v~lG 310 (442)
T PRK07203 233 SDSHKKYGK--DIVERLADFGLLGEKTLAAHCIYLSDEEIDLLKETDTFVVHNPESNMGNAVGYNPVLEMIKNGILLGLG 310 (442)
T ss_pred HHHHHHcCC--CHHHHHHhCCCCCCCcEEEEeecCCHHHHHHHHhcCCeEEECchhhhhcccCCCCHHHHHHCCCeEEEc
Confidence 888887774 5999999999999999999999999999999999999999999999998 8899999999999999999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC--CCCCccccccCcCC
Q 015784 330 TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL--WDNDIGSLEAGKKV 400 (400)
Q Consensus 330 tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg--~~~~~G~i~~G~~A 400 (400)
||+.. .+++.+|+.+..+.+... ....++.+++++|+|.+||+++| +++++|+|++||.|
T Consensus 311 tD~~~----~d~~~~~~~a~~~~~~~~-------~~~~~~~~~~~~~aT~~gA~~lg~~~~~~~G~l~~G~~A 372 (442)
T PRK07203 311 TDGYT----SDMFESYKVANFKHKHAG-------GDPNVGWPESPAMLFENNNKIAERYFGAKFGILEEGAKA 372 (442)
T ss_pred CCCCC----ccHHHHHHHHHHHhcccc-------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcc
Confidence 99753 479999999877765321 11124578999999999999999 46678999999987
|
|
| >cd01303 GDEase Guanine deaminase (GDEase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-48 Score=363.11 Aligned_cols=364 Identities=25% Similarity=0.347 Sum_probs=295.8
Q ss_pred EEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhh
Q 015784 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWL 107 (400)
Q Consensus 28 i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~ 107 (400)
+.+++....++++++|+|+||+|++||+..+.....+ ++.++||++|++|||||||+|+|+.++..++...+.++.+|+
T Consensus 14 ~~~~d~~~~~~~~g~V~v~~g~I~~vG~~~~~~~~~~-~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl 92 (429)
T cd01303 14 LELVEDALRVVEDGLIVVVDGNIIAAGAAETLKRAAK-PGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWL 92 (429)
T ss_pred ccccCCcEEEECCeEEEEECCEEEEeCchhhhhhhcC-CCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHH
Confidence 3455666778899999999999999998655421112 246899999999999999999999998888887788999999
Q ss_pred hhccccccCC-CChhhHHHHHHHHHHHHHhcCcceeeccCcC---CHHHHHHHHHHcCCeEEEecccccCCCCCCccccc
Q 015784 108 HDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV 183 (400)
Q Consensus 108 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 183 (400)
...+|+.+.. .+.++.+..++..+.+++++|+|++.+++.. ..+...+++.+.|+|..+++..++... + ....
T Consensus 93 ~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~~~~~--~-~~~~ 169 (429)
T cd01303 93 ETYTFPEEAKFADPAYAREVYGRFLDELLRNGTTTACYFATIHPESTEALFEEAAKRGQRAIAGKVCMDRNA--P-EYYR 169 (429)
T ss_pred HhhhhHHHHhcCCHHHHHHHHHHHHHHHHhCCceEEEeecccChhHHHHHHHHHHHhCCeEEEeeeeecCCC--C-cccc
Confidence 8888876554 4566777777788899999999999998533 345667888899999988776654321 1 1111
Q ss_pred CCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcC-CeeeEecCCCchhhhHHhhhcCCCCC
Q 015784 184 RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHG 262 (400)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~-~~v~~H~~~~~~~~~~~~~~~~~~~~ 262 (400)
......+....++++.+... .+.+...++++..+..+++.++++.++|+++| +++++|+.++..+.+.+.+.++...+
T Consensus 170 ~~~~~~~~~~~~~i~~~~~~-~~~v~~~~~p~~~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~e~~~~~~~~g~~~~ 248 (429)
T cd01303 170 DTAESSYRDTKRLIERWHGK-SGRVKPAITPRFAPSCSEELLAALGKLAKEHPDLHIQTHISENLDEIAWVKELFPGARD 248 (429)
T ss_pred cCHHHHHHHHHHHHHHHhCc-CCceEEEEecCcCCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHHHHHHHHHHcCCCCC
Confidence 22334455666667776654 35688888899999999999999999999999 99999999998888888777764456
Q ss_pred hHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCH
Q 015784 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSI 341 (400)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~ 341 (400)
+++++.+.|+++.+.++.|+.++++++++++++.|+.+++||.+|+.+ .+..|+++|+++|+++++|||+..+ ++.++
T Consensus 249 p~~~l~~~G~l~~~~~l~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~~d~ 327 (429)
T cd01303 249 YLDVYDKYGLLTEKTVLAHCVHLSEEEFNLLKERGASVAHCPTSNLFLGSGLFDVRKLLDAGIKVGLGTDVGGG-TSFSM 327 (429)
T ss_pred HHHHHHHCCCCCCCcEEEeCCCCCHHHHHHHHHcCCEEEECccchhhhccCCCCHHHHHHCCCeEEEeccCCCC-CCccH
Confidence 999999999999999999999999999999999999999999999988 7889999999999999999998754 56789
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.+|+.+....+.... ...++.+++++++|+++|.|||+++|+++++|+|++||+|
T Consensus 328 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~al~~aT~~gA~~lg~~~~~Gsle~Gk~A 383 (429)
T cd01303 328 LDTLRQAYKVSRLLGY---ELGGHAKLSPAEAFYLATLGGAEALGLDDKIGNFEVGKEF 383 (429)
T ss_pred HHHHHHHHHHHHhhcc---ccCCcCCCCHHHHHHHHhhHHHHHcCCCCCCcCcCCCCcc
Confidence 9999987766542210 0113456899999999999999999999889999999987
|
Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool. |
| >PRK12393 amidohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-47 Score=358.86 Aligned_cols=366 Identities=27% Similarity=0.383 Sum_probs=296.2
Q ss_pred ccEEEEecE-EEeecCCCceeece-eEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 19 STMILHNAV-IVTMDKESRVFRNG-GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 19 ~~~li~n~~-i~~~~~~~~~~~~~-~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+++|+|++ |++.++..+.+.++ +|+|+||+|++|++. . +.++.++||++|++|+|||||+|+|+.++.+++
T Consensus 2 ~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~-~-----~~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~rg 75 (457)
T PRK12393 2 PSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGAL-T-----PLPGERVIDATDCVVYPGWVNTHHHLFQSLLKG 75 (457)
T ss_pred CcEEEECCeEEEecCCCccccccCceEEEECCEEEEEecc-C-----CCCCCeEEeCCCCEEecCEeecccCcccccccc
Confidence 478999995 78765544444454 899999999999982 1 123569999999999999999999999999988
Q ss_pred cc--CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------CCHHHHHHHHHHcCCeEEE
Q 015784 97 IA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACL 166 (400)
Q Consensus 97 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------~~~~~~~~~~~~~g~~~~~ 166 (400)
.. .+.++.+|+....|+....+++++.+..++..+.+++++|+|++.|+.. ...+...+++.+.|+|..+
T Consensus 76 ~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~a~~~~G~R~~~ 155 (457)
T PRK12393 76 VPAGINQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHPGMPFDTGDILFDEAEALGMRFVL 155 (457)
T ss_pred cccccCCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhcccccccchHHHHHHHHHHcCCeEEE
Confidence 74 4567889999888887778899999999999999999999999998741 1246778999999999988
Q ss_pred ecccccCCCCCCcc----cccCCchHHHHHHHHHHHHhccCC-CCCeEEEeecccc-ccCCHHHHHHHHHHHHHcCCeee
Q 015784 167 VQSTMDCGEGLPAS----WAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQI-MNATDRLLLETRDMAREFKTGIH 240 (400)
Q Consensus 167 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~e~l~~~~~~a~~~~~~v~ 240 (400)
+...+.....++.. +........+....++.+.+.... .+.+.+.+.++.. +..+++.++++.+.++++|++++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~g~~~~ 235 (457)
T PRK12393 156 CRGGATQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTTPTFSLPPELLREVARAARGMGLRLH 235 (457)
T ss_pred EccccccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCCCCCCcCHHHHHHHHHHHHHcCCeEE
Confidence 76654432111111 111223444555666666665432 2346677788877 88999999999999999999999
Q ss_pred EecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHH
Q 015784 241 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEM 319 (400)
Q Consensus 241 ~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~ 319 (400)
+|+.++..+.+...+.++. ++++++...+.++.+++++|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|
T Consensus 236 ~H~~e~~~~~~~~~~~~g~--~~~~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~~~~~~~ 313 (457)
T PRK12393 236 SHLSETVDYVDFCREKYGM--TPVQFVAEHDWLGPDVWFAHLVKLDAEEIALLAQTGTGIAHCPQSNGRLGSGIAPALAM 313 (457)
T ss_pred EEeCCCHHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHHcCCeEEECchhhhhhcccCCCHHHH
Confidence 9999988887777766654 4889999999999999999999999999999999999999999999888 788999999
Q ss_pred HHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcC
Q 015784 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399 (400)
Q Consensus 320 ~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ 399 (400)
+++|+++++|||++.++...++|.+|+.+....+.. .....++++++++++|.+||+++|+++ +|+|++|+.
T Consensus 314 ~~~Gv~v~lGtD~~~~~~~~d~~~~~~~a~~~~~~~-------~~~~~~~~~~~l~~~T~~~A~~l~~~~-~G~l~~G~~ 385 (457)
T PRK12393 314 EAAGVPVSLGVDGAASNESADMLSEAHAAWLLHRAE-------GGADATTVEDVVHWGTAGGARVLGLDA-IGTLAVGQA 385 (457)
T ss_pred HHCCCeEEEecCCcccCCCccHHHHHHHHHHHhhhc-------CCCCCCCHHHHHHHHhHHHHHHhCCCC-CCCcCCCCc
Confidence 999999999999877666789999999877665421 112458999999999999999999975 799999998
Q ss_pred C
Q 015784 400 V 400 (400)
Q Consensus 400 A 400 (400)
|
T Consensus 386 A 386 (457)
T PRK12393 386 A 386 (457)
T ss_pred C
Confidence 7
|
|
| >PRK09228 guanine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-47 Score=357.03 Aligned_cols=364 Identities=24% Similarity=0.308 Sum_probs=292.8
Q ss_pred cEEEEecEEE-eec-------CCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 20 TMILHNAVIV-TMD-------KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 20 ~~li~n~~i~-~~~-------~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
..++++..|+ +.. +...++++++|+|+||+|++||+..++...++. ..++||++|++|+|||||+|+|+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~I~~g~I~~Vg~~~~~~~~~~~-~~~viD~~g~lv~PGlVn~H~H~~~ 81 (433)
T PRK09228 3 TKAYRGRLLHFTADPAEVDDEDALRYIEDGLLLVEDGRIVAAGPYAELRAQLPA-DAEVTDYRGKLILPGFIDTHIHYPQ 81 (433)
T ss_pred eEEEEEEEEccCCCccccCCCCcEEEECCeEEEEECCEEEEEcChHHhhhhcCC-CCeEEeCCCCEEecceecccccccc
Confidence 3456665555 222 344578999999999999999986554332222 3589999999999999999999988
Q ss_pred cccccccCCCChhHhhhhccccccCC-CChhhHHHHHHHHHHHHHhcCcceeeccCcC---CHHHHHHHHHHcCCeEEEe
Q 015784 92 QLAKGIADDVDLMTWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLV 167 (400)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~~~~~~~~~~~g~~~~~~ 167 (400)
+..++. .+.++.+|+..+.|+.... .++++.+..++..+.+++++|+|++.+++.. ..+...+.+.+.|+|..++
T Consensus 82 ~~~~g~-~~~~l~~wl~~~~~~~e~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~a~~~~GiR~~~~ 160 (433)
T PRK09228 82 TDMIAS-YGEQLLDWLNTYTFPEERRFADPAYAREVAEFFLDELLRNGTTTALVFGTVHPQSVDALFEAAEARNMRMIAG 160 (433)
T ss_pred hhhccC-CchHHHHHHHhhhhHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEeccccCHHHHHHHHHHHHHcCCeEEee
Confidence 877663 2346889998888876554 3566677777778899999999999996533 3456678888999999887
Q ss_pred cccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHc-CCeeeEecCCC
Q 015784 168 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEI 246 (400)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~-~~~v~~H~~~~ 246 (400)
...++.. .+. .........++...++++++... +.+.+.+.++..+..+++.++++.++|+++ ++++++|+.|+
T Consensus 161 ~~~~~~~--~~~-~~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~p~~~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E~ 235 (433)
T PRK09228 161 KVLMDRN--APD-GLRDTAESGYDDSKALIERWHGK--GRLLYAITPRFAPTSTPEQLEAAGALAREHPDVWIQTHLSEN 235 (433)
T ss_pred eeeecCC--CCc-ccccCHHHHHHHHHHHHHHHhCC--CCceEEEECCcCCcCCHHHHHHHHHHHHHCCCCceEEeecCC
Confidence 7766532 111 11122344455666667766543 467788889999999999999999999998 99999999999
Q ss_pred chhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCc
Q 015784 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 325 (400)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~ 325 (400)
..+.+.+.+.++....+++++.+.|+++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+..|+++|+++|++
T Consensus 236 ~~e~~~~~~~~g~~~~~~~~l~~~G~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv~ 315 (433)
T PRK09228 236 LDEIAWVKELFPEARDYLDVYERYGLLGPRAVFAHCIHLEDRERRRLAETGAAIAFCPTSNLFLGSGLFDLKRADAAGVR 315 (433)
T ss_pred hhHHHHHHHHcCCCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCeEEECCccHHhhcCCCcCHHHHHHCCCe
Confidence 9998888887776556799999999999999999999999999999999999999999999987 789999999999999
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 326 v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++|||.... ++.+++.+|+.+....+. ....++++++|+++|.+||+++|+++++|+|++||.|
T Consensus 316 v~lGtD~~~~-~~~d~~~~~~~~~~~~~~---------~~~~~~~~~~l~~aT~~~A~~lg~~~~~G~l~~Gk~A 380 (433)
T PRK09228 316 VGLGTDVGGG-TSFSMLQTMNEAYKVQQL---------QGYRLSPFQAFYLATLGGARALGLDDRIGNLAPGKEA 380 (433)
T ss_pred EEEecCCCCC-CCCCHHHHHHHHHHHhhc---------ccCCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCCC
Confidence 9999998643 567899999988776642 1345899999999999999999999888999999987
|
|
| >PRK06038 N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-47 Score=354.54 Aligned_cols=356 Identities=38% Similarity=0.637 Sum_probs=297.9
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|+++++ ..+.+++|+|+||+|++|++... ....++||+.|++|+|||||+|+|+.++.+++..
T Consensus 2 ~~~~~~~~~i~~~~~--~~~~~~~v~v~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~ 73 (430)
T PRK06038 2 ADIIIKNAYVLTMDA--GDLKKGSVVIEDGTITEVSESTP------GDADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYA 73 (430)
T ss_pred CCEEEEccEEEECCC--CeeeccEEEEECCEEEEecCCCC------CCCCEEEeCCCCEEecCeeecccCcchhhhhhcc
Confidence 358999999998653 34577899999999999998532 1245899999999999999999999999888888
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 178 (400)
.+.++.+|+....|+....+++++.+..++..+.++++.|+|++.|+. .+.....+++.+.|+|...+....+..
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~-~~~~~~~~a~~~~GiR~~~~~~~~d~~---- 148 (430)
T PRK06038 74 DDLPLAEWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMY-FYMDEVAKAVEESGLRAALSYGMIDLG---- 148 (430)
T ss_pred CCCCHHHHHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEccc-cCHHHHHHHHHHhCCeEEEEchhccCC----
Confidence 778999999988887777788899999999999999999999999986 455667788889999987765443321
Q ss_pred cccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcC
Q 015784 179 ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258 (400)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~ 258 (400)
........++...++++.+.....+.+....+++....++++.++++++.|+++|+++.+|+.++..+...+.+.++
T Consensus 149 ---~~~~~~~~l~~~~~~i~~~~~~~~g~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~G 225 (430)
T PRK06038 149 ---DDEKGEAELKEGKRFVKEWHGAADGRIKVMYGPHAPYTCSEEFLSKVKKLANKDGVGIHIHVLETEAELNQMKEQYG 225 (430)
T ss_pred ---CccchHHHHHHHHHHHHHhcCCCCCceEEEEeCCcCccCCHHHHHHHHHHHHHcCCcEEEEcCCCHHHHHHHHHHhC
Confidence 11123445556667777776554567888888999899999999999999999999999999999887777776666
Q ss_pred CCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCC
Q 015784 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN 337 (400)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~ 337 (400)
.. +++++.+.++++.+++++|+.++++++++++++.|+.+++||.+|+.+ .+..|+++++++|+++++|||++.++.
T Consensus 226 ~~--~i~~l~~~g~l~~r~~~~H~~~l~~~~~~~la~~g~~v~~~P~~n~~~~~~~~p~~~~~~~Gv~v~lGtD~~~~~~ 303 (430)
T PRK06038 226 MC--SVNYLDDIGFLGPDVLAAHCVWLSDGDIEILRERGVNVSHNPVSNMKLASGIAPVPKLLERGVNVSLGTDGCASNN 303 (430)
T ss_pred CC--HHHHHHHcCCCCCCeEEEEEecCCHHHHHHHHhcCCEEEEChHHhhhhccCCCCHHHHHHCCCeEEEeCCCCccCC
Confidence 53 889999999999999999999999999999999999999999999887 788999999999999999999876656
Q ss_pred CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+++.+|+.+....+... .....++++++|+++|.|||++||++ .|+|++||.|
T Consensus 304 ~~d~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~gA~~lg~~--~G~l~~G~~A 358 (430)
T PRK06038 304 NLDMFEEMKTAALLHKVNT------MDPTALPARQVLEMATVNGAKALGIN--TGMLKEGYLA 358 (430)
T ss_pred CcCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHhHHHHHHhCCC--CCccCCCccc
Confidence 7899999998776654221 12346899999999999999999996 4999999987
|
|
| >PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-46 Score=356.61 Aligned_cols=365 Identities=31% Similarity=0.504 Sum_probs=295.0
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc--c
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI--A 98 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~--~ 98 (400)
+++.|+.|+++++...++++++|+|+||+|++|++..+++. ++.++||++|++|||||||+|+|+.+...++. .
T Consensus 4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~----~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~ 79 (451)
T PRK08203 4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQ----PADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAA 79 (451)
T ss_pred EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCCC----CCCeEEeCCCCEEecceEeccccccchhccccccc
Confidence 34555799998876667899999999999999999654321 24689999999999999999999999888877 6
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-------CHHHHHHHHHHcCCeEEEecccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQSTM 171 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~ 171 (400)
.+.++.+|+.. .++....+++++.+..++..+.+++++|+|++.+++.. ..+...+++.+.|+|...+...+
T Consensus 80 ~~~~~~~~~~~-~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~ 158 (451)
T PRK08203 80 QDAELFPWLTT-LYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHHYLFPNGLRDALDDQIEAAREIGMRFHATRGSM 158 (451)
T ss_pred CCCcHHHHHHH-HhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcceeeccccccchHHHHHHHHHHcCCeEEEeccee
Confidence 67788899865 45555678889999999999999999999999997521 15667888999999998876554
Q ss_pred cCCC---CCCcccccCCchHHHHHHHHHHHHhccCCC-CCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 172 DCGE---GLPASWAVRTTDDCIQSQKELYAKHHHAAD-GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 172 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
.... ..++..........++...+.++++..... +.+++.++++..+..+++.+.++++.|+++|+++++|+.++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~ 238 (451)
T PRK08203 159 SLGESDGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCSPFSVSRELMRESAALARRLGVRLHTHLAETL 238 (451)
T ss_pred ecCCccCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCH
Confidence 3321 111111122334455566666666543322 578888888888899999999999999999999999999988
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcE
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICV 326 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v 326 (400)
.+.....+.++. .+++++.+.|.++.++++.|+.++++++++++++.|+.+++||.+++++ .+..|+++++++|+++
T Consensus 239 ~~~~~~~~~~g~--~~~~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~~~~~l~~~~~~~~~~~~~Gv~v 316 (451)
T PRK08203 239 DEEAFCLERFGM--RPVDYLEDLGWLGPDVWLAHCVHLDDAEIARLARTGTGVAHCPCSNMRLASGIAPVRELRAAGVPV 316 (451)
T ss_pred HHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEEeCCCHHHHHHHHhcCCeEEECcHHhhhhccCCCCHHHHHHCCCeE
Confidence 877766655554 4899999999999999999999999999999999999999999999887 7889999999999999
Q ss_pred EEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 327 SLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 327 ~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++|||++.+++..+++.+++.+....+... ....++++++|+++|.|||+++|++ ++|+|++||.|
T Consensus 317 ~lGtD~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~~~l~~~T~~~A~~lg~~-~~G~l~~G~~A 382 (451)
T PRK08203 317 GLGVDGSASNDGSNLIGEARQALLLQRLRY-------GPDAMTAREALEWATLGGARVLGRD-DIGSLAPGKLA 382 (451)
T ss_pred EEecCCCccCCCcCHHHHHHHHHHHhhccc-------CCCCCCHHHHHHHHHHHHHHHhCCC-CCCCcCCCCcc
Confidence 999998766567889999988766554220 1235899999999999999999998 57999999987
|
|
| >PRK06380 metal-dependent hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-46 Score=353.40 Aligned_cols=352 Identities=34% Similarity=0.527 Sum_probs=289.2
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++. ..+.+++|+|+||+|++||+..+ .+.++||++|++|+|||||+|+|+.++..++...
T Consensus 2 ~~li~~~~v~~~~~~-~~~~~~~v~i~~g~I~~ig~~~~-------~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~~ 73 (418)
T PRK06380 2 SILIKNAWIVTQNEK-REILQGNVYIEGNKIVYVGDVNE-------EADYIIDATGKVVMPGLINTHAHVGMTASKGLFD 73 (418)
T ss_pred eEEEEeeEEEECCCC-ceeeeeeEEEECCEEEEecCCCC-------CCCEEEECCCCEEccCEEeeccCCCccccCCccc
Confidence 479999999987543 34568999999999999998532 2458999999999999999999999999998888
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (400)
+.++.+|+.. .|+....+++++.+..++..+.+++++|||++.|+. ...+...+++.+.|+|.+++...++... ..
T Consensus 74 ~~~l~~~~~~-~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~~--~~ 149 (418)
T PRK06380 74 DVDLEEFLMK-TFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLY-YSEDIIAKAAEELGIRAFLSWAVLDEEI--TT 149 (418)
T ss_pred CCCHHHHHHH-HHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccc-cChHHHHHHHHHhCCeEEEecccccCCc--cc
Confidence 8899999987 678778889999999999999999999999999986 3456777888999999988766654321 00
Q ss_pred ccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCC
Q 015784 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259 (400)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 259 (400)
..........++++++.. .+.++..++++..+..+++.++++++.|+++|+++++|+.++..+.......++
T Consensus 150 -----~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g- 221 (418)
T PRK06380 150 -----QKGDPLNNAENFIREHRN--EELVTPSIGVQGIYVANDETYLKAKEIAEKYDTIMHMHLSETRKEVYDHVKRTG- 221 (418)
T ss_pred -----ccchHHHHHHHHHHHhcC--CCCeEEEEECCCCccCCHHHHHHHHHHHHHcCCCEEEEeCCcHHHHHHHHHHhC-
Confidence 011123344455555543 356888888999999999999999999999999999999998766554444444
Q ss_pred CCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-c-CcccHHHHHHcCCcEEEcCCCCCCCC
Q 015784 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L-GFAPIKEMLHADICVSLGTDGAPSNN 337 (400)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~-~~~~~~~~~~~Gv~v~~gtD~~~~~~ 337 (400)
..+++++...+.++.+.++.|+.++++++++++++.|+.+++||.+++++ . +..|+++++++|+++++|||+..+++
T Consensus 222 -~~~ie~~~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~l~~~g~~p~~~~~~~Gv~v~lGTD~~~~~~ 300 (418)
T PRK06380 222 -ERPVEHLEKIGFLNSKLIAAHCVWATYHEIKLLSKNGVKVSWNSVSNFKLGTGGSPPIPEMLDNGINVTIGTDSNGSNN 300 (418)
T ss_pred -CCHHHHHHHCCCCCCCeEEEEeecCCHHHHHHHHHcCCEEEECHHHHHhhccCCCCcHHHHHHCCCeEEEcCCCCcCCC
Confidence 35899999999999999999999999999999999999999999999887 4 68999999999999999999876656
Q ss_pred CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+++.+|+.+....+... ..+..++++++|+++|.|+|++||++ .|+|++||+|
T Consensus 301 ~~d~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~aT~~gA~~lg~~--~G~l~~G~~A 355 (418)
T PRK06380 301 SLDMFEAMKFSALSVKNER------WDASIIKAQEILDFATINAAKALELN--AGSIEVGKLA 355 (418)
T ss_pred CcCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCC--CCccCCCccC
Confidence 7899999998765443210 11224899999999999999999994 6999999987
|
|
| >PRK08418 chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-46 Score=347.80 Aligned_cols=353 Identities=22% Similarity=0.268 Sum_probs=279.3
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++.+.....++++.|+|+ |+|++||+..+.+...+ +.++||+.|++|+|||||+|+|+.++..++...+
T Consensus 2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~~--~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~ 78 (408)
T PRK08418 2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKYP--NAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDY 78 (408)
T ss_pred EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhCC--CCcEEecCCcEEccCccccccchhhhhhccccCC
Confidence 47999999987755567899999999 99999998654433222 3469999999999999999999999888887777
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (400)
.++.+|+...+++.. .+.++..+..++..+.+++++|+||+.++... ....+++.+.|+|.++....+... ..
T Consensus 79 ~~~~~wl~~~~~~~~-~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~~~--~~~~~a~~~~GiR~~~~~~~~~~~----~~ 151 (408)
T PRK08418 79 GDFIPWLGSVINHRE-DLLEKCKGALIQQAINEMLKSGVGTIGAISSF--GIDLEICAKSPLRVVFFNEILGSN----AS 151 (408)
T ss_pred CchHHHHHHHhhhhh-hcCHHHHHHHHHHHHHHHHhcCceEEEEeecc--hhhHHHHHhcCCeEEEEeeeeCCC----cc
Confidence 788999987766543 45666777777788899999999999987632 233578889999998765443221 11
Q ss_pred cccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCC-
Q 015784 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV- 259 (400)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~- 259 (400)
+ .........+..........+.+...+++|..++++++.++++.++|+++|+++++|+.|+..+.+.+.+.++.
T Consensus 152 ~----~~~~~~~~~~~~~~~~~~~~~~~~~~~aph~~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~~~~~~~G~~ 227 (408)
T PRK08418 152 A----VDELYQDFLARFEESKKFKSKKFIPAIAIHSPYSVHPILAKKALQLAKKENLLVSTHFLESKAEREWLEESKGWF 227 (408)
T ss_pred c----hhhhHHHHHHHHHhhhcccCCceeEEEeCCCCCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHHHHHhccCch
Confidence 1 01111111122222222233568888999999999999999999999999999999999999988877766552
Q ss_pred -------------CCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCc
Q 015784 260 -------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 325 (400)
Q Consensus 260 -------------~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~ 325 (400)
..++++++...+ +.+.++.|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++|++
T Consensus 228 ~~~~~~~~~~~~~~~~pv~~l~~~g--~~~~~~~H~~~~~~~di~~la~~g~~v~~cP~sn~~lg~g~~p~~~~~~~Gi~ 305 (408)
T PRK08418 228 KKFFEKFLKEPKPLYTPKEFLELFK--GLRTLFTHCVYASEEELEKIKSKNASITHCPFSNRLLSNKALDLEKAKKAGIN 305 (408)
T ss_pred hhhhhhhcccccccCCHHHHHHHhC--CCCeEEEecccCCHHHHHHHHHcCCcEEECHhHHHHhcCCCccHHHHHhCCCe
Confidence 235888888887 4688999999999999999999999999999999998 889999999999999
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 326 v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++|||+..++++.+++.+|+.+....+.. ....+++++|+++|.|+|++||++ .|+|++||.|
T Consensus 306 v~lGtD~~~~~~~~~~~~em~~~~~~~~~~---------~~~~~~~~~l~~aT~~gA~alg~~--~G~l~~G~~A 369 (408)
T PRK08418 306 YSIATDGLSSNISLSLLDELRAALLTHANM---------PLLELAKILLLSATRYGAKALGLN--NGEIKEGKDA 369 (408)
T ss_pred EEEeCCCCCCCCCcCHHHHHHHHHHHhccC---------CccccHHHHHHHHHHHHHHHhCCC--CccccCCCcc
Confidence 999999877777899999999877654321 111357899999999999999996 5999999987
|
|
| >PRK08204 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-46 Score=353.91 Aligned_cols=362 Identities=24% Similarity=0.351 Sum_probs=288.6
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|++.++....+++++|+|+||+|++|++..+. .+.++||++|++|+|||||+|+|+.++..++..
T Consensus 2 ~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~------~~~~viD~~g~~v~PGlId~H~H~~~~~~~~~~ 75 (449)
T PRK08204 2 KRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEA------PDAEVVDARGMIVMPGLVDTHRHTWQSVLRGIG 75 (449)
T ss_pred CcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCC------CCCeEEeCCCCEEecCEEeeeeccchhhhcccc
Confidence 46799999999877655677899999999999999986431 245899999999999999999999988888877
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-----CCHHHHHHHHHHcCCeEEEecccccC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVSEMAKAVELLGLRACLVQSTMDC 173 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (400)
.+.++.+|+....++....+++++.+..+...+.+++++|||++.+++. .......+.+...|+|..++......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~G~r~~~~~~~~~~ 155 (449)
T PRK08204 76 ADWTLQTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSHINNSPEHADAAIRGLAEAGIRAVFAHGSPGP 155 (449)
T ss_pred CCCcHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeecccccCChhHHHHHHHHHHHcCCeEEEEccccCC
Confidence 7778889988777777778888888999888889999999999998652 23456678888999998876655443
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHH
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (400)
++ .+..............+++++....+..+.....++.....++|.+.++++.|++.|+++++|+.++...
T Consensus 156 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~---- 227 (449)
T PRK08204 156 SP----YWPFDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRGPEFSSWEVARADFRLARELGLPISMHQGFGPWG---- 227 (449)
T ss_pred CC----CCCcchhhhhHHHHHHHHHhhccCCCCceEEEEecCCcccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcc----
Confidence 32 2222223344445556666665554445656566666677788999999999999999999999887542
Q ss_pred hhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCC
Q 015784 254 MDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDG 332 (400)
Q Consensus 254 ~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~ 332 (400)
.....++.+...++++.+.+++|+.++++++++++++.|+.+++||.++..+ .+..|++.++++|+++++|||+
T Consensus 228 -----~~~~~~~~l~~~g~~~~~~~i~H~~~~~~~~~~~la~~g~~v~~~P~~~~~~g~~~~~~~~~~~~Gv~v~lGtD~ 302 (449)
T PRK08204 228 -----ATPRGVEQLHDAGLLGPDLNLVHGNDLSDDELKLLADSGGSFSVTPEIEMMMGHGYPVTGRLLAHGVRPSLGVDV 302 (449)
T ss_pred -----cCCCHHHHHHHCCCCCCCeEEEecCCCCHHHHHHHHHcCCCEEEChHHHhhhcCCCCcHHHHHhcCCceeecccc
Confidence 1234778889999999999999999999999999999999999999998877 6788999999999999999998
Q ss_pred CCCCCCCCHHHHHHHHHHHhcccccc-----cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 333 APSNNRMSIVDEMYLASLINKGREVF-----ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++. .+.++|.+|+.+....+..... ........+++++++|+++|.|+|+++|+++++|+|++||.|
T Consensus 303 ~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~T~~gA~~lg~~~~~G~le~Gk~A 374 (449)
T PRK08204 303 VTS-TGGDMFTQMRFALQAERARDNAVHLREGGMPPPRLTLTARQVLEWATIEGARALGLEDRIGSLTPGKQA 374 (449)
T ss_pred CCC-CCcCHHHHHHHHHHHHHhhcccccccccccCCCcCCCCHHHHHHHHhHHHHHHcCCCCCCcccCCCCcC
Confidence 644 5688999999987665422110 001112457999999999999999999999889999999987
|
|
| >TIGR02967 guan_deamin guanine deaminase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-46 Score=347.66 Aligned_cols=347 Identities=23% Similarity=0.352 Sum_probs=281.6
Q ss_pred eeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccC
Q 015784 37 VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYES 116 (400)
Q Consensus 37 ~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (400)
++++++|+|+||+|++||+..+.....+ .+.++||++|++|||||||+|+|+.++..++ ..+.++.+|+....|+...
T Consensus 3 ~~~~~~V~V~~g~I~~Vg~~~~~~~~~~-~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g-~~~~~~~~~~~~~~~~~~~ 80 (401)
T TIGR02967 3 YFEDGLLVVENGRIVAVGDYAELKETLP-AGVEIDDYRGHLIMPGFIDTHIHYPQTEMIA-SYGEQLLEWLEKYTFPTEA 80 (401)
T ss_pred EEeceEEEEECCEEEEecCcchhhhccC-CCCeEEeCCCCEEecceeecccCchhhhhcc-cCCchHHHHHhhCcCcccc
Confidence 5678899999999999998654332222 2458999999999999999999998887776 4566788999887776555
Q ss_pred C-CChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHH
Q 015784 117 N-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192 (400)
Q Consensus 117 ~-~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
. .++++.+..+...+.+++++|+|++.+++... .....+.+.+.|+|...+...++.. ++..+ .......+..
T Consensus 81 ~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~~a~~~~G~R~~~~~~~~d~~--~~~~~-~~~~~~~~~~ 157 (401)
T TIGR02967 81 RFADPDHAEEVAEFFLDELLRNGTTTALVFATVHPESVDALFEAALKRGMRMIAGKVLMDRN--APDYL-RDTAESSYDE 157 (401)
T ss_pred ccCCHHHHHHHHHHHHHHHHhCCCcEEEeccccCHHHHHHHHHHHHHCCCeEEEeeeeecCC--CCccc-ccCHHHHHHH
Confidence 4 35666677777788899999999999986443 2456788899999988777665422 22111 1123344555
Q ss_pred HHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHc-CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhC
Q 015784 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE 271 (400)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 271 (400)
..++++++.. .+.+++...++.....+++.++++++.|+++ |+++++|+.++..+.+...+.++.....++++.+.|
T Consensus 158 ~~~~i~~~~~--~g~i~~~~~~~~~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~l~~~g 235 (401)
T TIGR02967 158 SKALIERWHG--KGRLLYAVTPRFAPTSSPEQLAAAGELAKEYPDVYVQTHLSENKDEIAWVKELFPEAKDYLDVYDHYG 235 (401)
T ss_pred HHHHHHHHhC--cCCceEEEECCcCCcCcHHHHHHHHHHHHhCCCCeeEEEECCCchHHHHHHHHcCCCCcHHHHHHHCC
Confidence 6666666554 2567777888888899999999999999999 999999999998888888877776556789999999
Q ss_pred CCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHH
Q 015784 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASL 350 (400)
Q Consensus 272 ~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~ 350 (400)
+++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+..|++.|+++|+++++|||+... +..+++.+++.+..
T Consensus 236 ~lg~~~~~~H~~~~~~~~~~~l~~~g~~v~~~P~~~~~~~~g~~~~~~~~~~Gv~v~lGtD~~~~-~~~~~~~~~~~~~~ 314 (401)
T TIGR02967 236 LLGRRSVFAHCIHLSDEECQRLAETGAAIAHCPTSNLFLGSGLFNLKKALEHGVRVGLGTDVGGG-TSFSMLQTLREAYK 314 (401)
T ss_pred CCCCCeEEEecccCCHHHHHHHHHcCCeEEEChHHHHHhccCCCCHHHHHHCCCeEEEecCCCCC-CCcCHHHHHHHHHH
Confidence 999999999999999999999999999999999999887 7889999999999999999998643 45789999998776
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+.. ..+++++++|+++|.|||++||+++++|+|++||.|
T Consensus 315 ~~~~~---------~~~~~~~~~l~~aT~~~A~~lg~~~~~G~i~~G~~A 355 (401)
T TIGR02967 315 VSQLQ---------GARLSPFEAFYLATLGGARALDLDDRIGNFEPGKEA 355 (401)
T ss_pred Hhhhc---------CCCCCHHHHHHHHHHHHHHHhCCcCCccccCCCCcc
Confidence 65422 235899999999999999999999889999999987
|
This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model. |
| >PRK08393 N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-46 Score=347.87 Aligned_cols=355 Identities=34% Similarity=0.557 Sum_probs=294.7
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++ ....+++|+|+||+|++|++.... +..++||+.|++|+|||||+|+|+.++..++...
T Consensus 2 ~~~i~~~~i~~~~~--~~~~~~~i~i~~g~I~~v~~~~~~------~~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~~ 73 (424)
T PRK08393 2 SILIKNGYVIYGEN--LKVIRADVLIEGNKIVEVKRNINK------PADTVIDASGSVVSPGFINAHTHSPMVLLRGLAD 73 (424)
T ss_pred eEEEECcEEEeCCC--CceecceEEEECCEEEEecCCCCC------CCCeEEeCCCCEEccCeeeeccCcchHhhhhccC
Confidence 58999999998653 344678999999999999975321 2457999999999999999999999998888888
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (400)
+.++.+|+....|+....+++++.+..++..+.+++++|+||+.++. .......+++...|+|.+......... .+
T Consensus 74 ~~~l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~~~~~~a~~~~G~r~~~~~~~~~~~---~~ 149 (424)
T PRK08393 74 DVPLMEWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMY-FHMEEVAKATLEVGLRGYLSYGMVDLG---DE 149 (424)
T ss_pred CCCHHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEeccc-cCHHHHHHHHHHhCCeEEEeceEecCC---Cc
Confidence 88999999988888777788899999999999999999999999986 456777888889999988765544321 11
Q ss_pred ccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCC
Q 015784 180 SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259 (400)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 259 (400)
......+....+.++.+.....+.+...++++..+.++++.++++++.|+++|+++++|+.++..+.+...+.++.
T Consensus 150 ----~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~ 225 (424)
T PRK08393 150 ----EKREKEIKETEKLMEFIEKLNSPRVHFVFGPHAPYTCSLALLKWVREKAREWNKLITIHLSETMDEIKQIREKYGK 225 (424)
T ss_pred ----cchHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCc
Confidence 1123344445555555555545567777788888889999999999999999999999999999888888877764
Q ss_pred CCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCC
Q 015784 260 DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR 338 (400)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~ 338 (400)
.+++.+...|+++.+.++.|+.++++++++++++.|+.+++||.+|.++ .+..|+++++++|+++++|||++.++..
T Consensus 226 --~~~~~l~~~G~l~~~~~~~H~~~l~~~~l~~la~~g~~v~~~P~sn~~lg~g~~~~~~~~~~Gv~v~lGtD~~~~~~~ 303 (424)
T PRK08393 226 --SPVVLLDEIGFLNEDVIAAHGVWLSSRDIRILASAGVTVAHNPASNMKLGSGVMPLRKLLNAGVNVALGTDGAASNNN 303 (424)
T ss_pred --CHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHhcCCEEEECHHHHHhhccCCCCHHHHHHCCCcEEEecCCCccCCc
Confidence 4899999999999999999999999999999999999999999999888 7889999999999999999998766566
Q ss_pred CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 339 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+++.+++.+....+... .....++++++++++|.|||+++|++ .|+|++||+|
T Consensus 304 ~d~~~~~~~a~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~lg~~--~G~l~~G~~A 357 (424)
T PRK08393 304 LDMLREMKLAALLHKVHN------LDPTIADAETVFRMATQNGAKALGLK--AGVIKEGYLA 357 (424)
T ss_pred hhHHHHHHHHHHHHhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcc
Confidence 789999998765543211 11223689999999999999999996 4999999987
|
|
| >cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-45 Score=345.79 Aligned_cols=362 Identities=42% Similarity=0.665 Sum_probs=287.3
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++++ .+.+++++|+|+||||++|++..+.+ . ..+.++||+.|++|+|||||+|+|+.++..++....
T Consensus 1 ~~i~~~~v~~~~~-~~~~~~~~v~i~~g~I~~ig~~~~~~--~-~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~ 76 (411)
T cd01298 1 ILIRNGTIVTTDP-RRVLEDGDVLVEDGRIVAVGPALPLP--A-YPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADD 76 (411)
T ss_pred CeEEeeEEEEeCC-cceeecceEEEECCEEEEecCccccc--c-CCcCeEEeCCCCEEccCccccccchhhHHhhcccCC
Confidence 4799999999754 45778999999999999999864421 1 125689999999999999999999988777666666
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (400)
.++.+|+...+++.....+.++.+..+...+..+++.|+|++.+++........+.....|++.......+.....
T Consensus 77 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~---- 152 (411)
T cd01298 77 LPLMEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMYFFYPDAVAEAAEELGIRAVLGRGIMDLGTE---- 152 (411)
T ss_pred CCHHHHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECccccchHHHHHHHHHhCCeEEEEcceecCCCc----
Confidence 6789999988877666677788888888888999999999999986433245566677778888766655443211
Q ss_pred cccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCC
Q 015784 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (400)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 260 (400)
. .......+++..+.++.+...+.+.+++.++++.....+++.+.++++.|+++|+++.+|+.++....+.+.+.++.
T Consensus 153 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~- 230 (411)
T cd01298 153 D-VEETEEALAEAERLIREWHGAADGRIRVALAPHAPYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLEKYGK- 230 (411)
T ss_pred c-cccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCCCccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHhCC-
Confidence 1 11233445556666666655445667887888877778999999999999999999999999887766655555543
Q ss_pred CChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCC
Q 015784 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRM 339 (400)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~ 339 (400)
..++++...+.++.++++.|+.++++++++++++.|+.+++||.++..+ .+..|+++++++|+++++|||++.++...
T Consensus 231 -~~~~~~~~~~~~~~~~~i~H~~~l~~~~~~~l~~~gi~~~~~p~~~~~~~~~~~~~~~~~~~Gv~~~~GsD~~~~~~~~ 309 (411)
T cd01298 231 -RPVEYLEELGLLGPDVVLAHCVWLTDEEIELLAETGTGVAHNPASNMKLASGIAPVPEMLEAGVNVGLGTDGAASNNNL 309 (411)
T ss_pred -CHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHcCCeEEEChHHhhhhhhCCCCHHHHHHCCCcEEEeCCCCccCCCc
Confidence 3778888888888899999999999999999999999999999998876 56789999999999999999998665567
Q ss_pred CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 340 SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++.+++.+....+.. ...+.+++++++|+++|.|||+++|++ ++|+|++|+.|
T Consensus 310 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~al~~~T~~~A~~lg~~-~~G~i~~G~~A 363 (411)
T cd01298 310 DMFEEMRLAALLQKLA------HGDPTALPAEEALEMATIGGAKALGLD-EIGSLEVGKKA 363 (411)
T ss_pred CHHHHHHHHHHHhccc------cCCCCcCCHHHHHHHHHhhHHHHhCCc-cCCCcCCCccC
Confidence 8999888876554321 012246999999999999999999998 68999999987
|
Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD. |
| >cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-45 Score=335.03 Aligned_cols=329 Identities=21% Similarity=0.276 Sum_probs=269.1
Q ss_pred CEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHH
Q 015784 48 DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIST 127 (400)
Q Consensus 48 g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (400)
|+|++||+..++...++ +.+++|+.|++|+|||||+|+|+.++.+++...+.++.+|+...+ +....+++++.+..+
T Consensus 1 ~~I~aVG~~~~~~~~~~--~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~-~~~~~~~~e~~~~~a 77 (381)
T cd01312 1 DKILEVGDYEKLEKRYP--GAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVI-NSRDELLKQPWEEAI 77 (381)
T ss_pred CeEEEECChHHHHhhcC--CCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHH-HHHHhcChHHHHHHH
Confidence 69999998766544333 468999999999999999999999999988777788999997654 445567888889999
Q ss_pred HHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCC
Q 015784 128 LLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGR 207 (400)
Q Consensus 128 ~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (400)
+..+.+++++|+||+.|++. ... ..+++.+.|+|.+++...++..+ .. .........+.+..+....++.
T Consensus 78 ~~~~~E~l~~G~Tt~~d~~~-~~~-~~~a~~~~GiR~~~~~~~~~~~~---~~-----~~~~~~~~~~~~~~~~~~~~~~ 147 (381)
T cd01312 78 RQGIRQMLESGTTSIGAISS-DGS-LLPALASSGLRGVFFNEVIGSNP---SA-----IDFKGETFLERFKRSKSFESQL 147 (381)
T ss_pred HHHHHHHHHhCCeEEEEecC-CHH-HHHHHHHcCCcEEEEEeeECCCC---ch-----hhhhHHHHHHHHHHhhccCccc
Confidence 99999999999999999873 333 77888899999998877664321 11 1111122222233332223467
Q ss_pred eEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcC----------------CCCChHHHHhHhC
Q 015784 208 IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK----------------VDHGTVTFLDKIE 271 (400)
Q Consensus 208 ~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~~~ 271 (400)
++..++++.++..+++.++.+.++|+++++++++|+.|+..+.+.+.+.++ .+.++++++.+.|
T Consensus 148 v~~~~~p~a~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~g~~pv~~l~~~g 227 (381)
T cd01312 148 FIPAISPHAPYSVHPELAQDLIDLAKKLNLPLSTHFLESKEEREWLEESKGWFKHFWESFLKLPKPKKLATAIDFLDMLG 227 (381)
T ss_pred eEEEECCCCCcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHHHHHHHhccchhhHhhhhcccccccCCCCHHHHHHHcC
Confidence 888899999999999999999999999999999999999988776654431 1456899999999
Q ss_pred CCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHH
Q 015784 272 FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASL 350 (400)
Q Consensus 272 ~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~ 350 (400)
+++++.++.|+.++++++++++++.|+.+++||.+|+++ .+..|+++|+++|+++++|||++.+++..+++.+|+.+..
T Consensus 228 ~L~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~lg~g~~p~~~~~~~Gv~v~lGtD~~~~~~~~d~~~~~~~~~~ 307 (381)
T cd01312 228 GLGTRVSFVHCVYANLEEAEILASRGASIALCPRSNRLLNGGKLDVSELKKAGIPVSLGTDGLSSNISLSLLDELRALLD 307 (381)
T ss_pred CCCCCcEEEECCcCCHHHHHHHHHcCCeEEECcchhhhhcCCCcCHHHHHHCCCcEEEeCCCCccCCCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999887 7889999999999999999998877677899999999876
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+.. ...++++++|+++|.|+|++||++ .|+|++||+|
T Consensus 308 ~~~~~---------~~~~~~~~~l~~aT~~gA~alg~~--~Gsle~Gk~A 346 (381)
T cd01312 308 LHPEE---------DLLELASELLLMATLGGARALGLN--NGEIEAGKRA 346 (381)
T ss_pred hcccc---------cccCCHHHHHHHHHHHHHHHhCCC--CCccCCCCcc
Confidence 65422 113678999999999999999996 7999999987
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. |
| >COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-45 Score=340.20 Aligned_cols=361 Identities=33% Similarity=0.539 Sum_probs=303.9
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
..++|+|..++..++... ++.+++.|+||+|+.|++..+.+ .+.++||++|++|+|||||+|+|+.++..++..
T Consensus 2 ~~~~i~~~~~~~~d~~~~-~~~~~~~i~~g~I~~ig~~~~~~-----~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~ 75 (421)
T COG0402 2 TMLLIRGDLLLTNDPEGR-IEDGDLVIEDGKIVAIGANAEGP-----PDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLA 75 (421)
T ss_pred cceeeeCcEEeecCcccc-eeeeeEEEcCCEEEEeCCcCCCC-----CCceeecCCCCEeccCccccccchHHHHHhhhh
Confidence 357899999998654433 56789999999999999976531 357899999999999999999999999999998
Q ss_pred CCCChhHhhhhccccccCC-CChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHHHHHHHHcCCeEEEecccccCC
Q 015784 99 DDVDLMTWLHDRIWPYESN-MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCG 174 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (400)
...++..|+...+|+.... .++++.+..+...+..++++|+|++..+.... .....+++.+.|++...+..+++.+
T Consensus 76 ~~~~l~~wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~ 155 (421)
T COG0402 76 DDLPLLEWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADAAFEAALEVGLRAVLGPVLQDVA 155 (421)
T ss_pred cccchHHHHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCccccccccchhhhhHHHHHHHHHHhCCeeEeeeccccCC
Confidence 8888999999999988877 67778899999999999999999977655322 2346789999999999998888765
Q ss_pred CCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHh
Q 015784 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (400)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (400)
++......... ++...++++++...+ .+.+...++..+..+++.++.+.++++++|+++++|+.|+..+.+...
T Consensus 156 --~p~~~~~~~~~--~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~ 229 (421)
T COG0402 156 --FPDPGAETDEE--LEETEELLREAHGLG--RDVVGLAPHFPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVL 229 (421)
T ss_pred --CCcccccchHH--HHHHHHHHHHHhcCC--CeeEEEecCCCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHH
Confidence 33333222222 566778888888764 677778999999999999999999999999999999999999999888
Q ss_pred hhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCC
Q 015784 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~ 333 (400)
+.++. .+++++...+.++.+.++.|+.++++++++.+++.|+.+++||.+|+++ .+..|++++++.|+++++|||+.
T Consensus 230 ~~~g~--~~~~~~~~~g~l~~~~~~~H~~~~~~~e~~~l~~~g~~v~~cP~sN~~L~sG~~p~~~~~~~gv~v~~gTD~~ 307 (421)
T COG0402 230 EPYGA--RPVERLDLLGLLGSHTLLAHCVHLSEEELELLAESGASVVHCPRSNLKLGSGIAPVRRLLERGVNVALGTDGA 307 (421)
T ss_pred hhcCC--CHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHhhCCCeEEECcchhccccCCCCCHHHHHHcCCCEEEecCCc
Confidence 75554 4999999999999999999999999999999999999999999999999 78999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+++.+++|++|+.+..+.+..... ....... ++|+++|.|+|++||+ ++.|+|++|+.|
T Consensus 308 ~~~~~~d~l~~~~~a~~l~~~~~~~-----~~~~~~~-~~l~~aT~~gA~alg~-~~~G~le~G~~A 367 (421)
T COG0402 308 ASNNVLDMLREMRTADLLQKLAGGL-----LAAQLPG-EALDMATLGGAKALGL-DDIGSLEVGKKA 367 (421)
T ss_pred cccChHHHHHHHHHHHHHHHhhcCC-----CcccchH-HHHHHHHhhHHHHcCC-cccCCccccccc
Confidence 8877799999999998888754211 1112222 4999999999999999 568999999987
|
|
| >cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-45 Score=338.81 Aligned_cols=345 Identities=21% Similarity=0.272 Sum_probs=271.3
Q ss_pred ceeeceeE-EEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC-----CCChhHhhhh
Q 015784 36 RVFRNGGV-FVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-----DVDLMTWLHD 109 (400)
Q Consensus 36 ~~~~~~~i-~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~-----~~~~~~~~~~ 109 (400)
++.++++| +|+||+|++||+... .++||+.|++|||||||+|+|+.++.+++... +.++.+|+.
T Consensus 6 ~~~~~~~i~~v~~g~I~~Vg~~~~---------~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~- 75 (418)
T cd01313 6 GWERNVRIEVDADGRIAAVNPDTA---------TEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRE- 75 (418)
T ss_pred ceecCeEEEEeCCCeEEEecCCCC---------CcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHH-
Confidence 46688999 999999999998532 25699999999999999999999999988764 457778985
Q ss_pred ccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------------CCHHHHHHHHHHcCCeEEEecccccCCC
Q 015784 110 RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------------QHVSEMAKAVELLGLRACLVQSTMDCGE 175 (400)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (400)
..++....+++++.+..++..+.+++++|+|++.++.. ...+...+++.+.|+|..++...+....
T Consensus 76 ~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~~ 155 (418)
T cd01313 76 LMYRFAARLTPEQIEAIARQLYIEMLLAGITAVGEFHYVHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARAG 155 (418)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeeeeccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEeccC
Confidence 45666778999999999999999999999999998631 1135678889999999988776665431
Q ss_pred CCCcc-ccc-----CCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchh
Q 015784 176 GLPAS-WAV-----RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (400)
Q Consensus 176 ~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (400)
..... ... ......++...+.+..+.. .+.+...+.++.....+++.++.+.+.|++ |+++++|+.|+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~~a~~-g~~i~~H~~e~~~e 232 (418)
T cd01313 156 FGGPAPNPGQRRFINGYEDFLGLLEKALRAVKE--HAAARIGVAPHSLRAVPAEQLAALAALASE-KAPVHIHLAEQPKE 232 (418)
T ss_pred CCCCCCchhhhhhcccHHHHHHHHHHHhhhhcc--CCceEEEEccCCCCCCCHHHHHHHHHHHhc-CCceEEEeCCCHHH
Confidence 11111 000 0111222222222223322 356777788888889999999999999999 99999999988877
Q ss_pred hhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEE
Q 015784 250 NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSL 328 (400)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~ 328 (400)
.....+.++. .+++++.+.+.++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++|+++++
T Consensus 233 ~~~~~~~~g~--~~i~~l~~~g~l~~~~~~~H~~~l~~~~~~~la~~g~~v~~~P~sn~~lg~g~~p~~~l~~~Gv~v~l 310 (418)
T cd01313 233 VDDCLAAHGR--RPVELLLDHGHLDARWCLVHATHLTDNETLLLGRSGAVVGLCPTTEANLGDGIFPAAALLAAGGRIGI 310 (418)
T ss_pred HHHHHHHcCC--CHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECCCchhhccCCCCCHHHHHHCCCcEEE
Confidence 7766666654 4899999999999999999999999999999999999999999999988 889999999999999999
Q ss_pred cCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 329 GTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 329 gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
|||++. ..+++.+|+.+..+.+..............++++++|+++|.|+|++||++ +|+|++||.|
T Consensus 311 GtD~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~gA~alg~~--~Gsle~Gk~A 377 (418)
T cd01313 311 GSDSNA---RIDLLEELRQLEYSQRLRDRARNVLATAGGSSARALLDAALAGGAQALGLA--TGALEAGARA 377 (418)
T ss_pred ecCCCC---CcCHHHHHHHHHHHHHHHhcccccccccCCCCHHHHHHHHHHHHHHHhCCC--CCeECCCCcc
Confidence 999753 367999999877665432111011112346999999999999999999997 7999999987
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. |
| >PRK06151 N-ethylammeline chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-44 Score=341.46 Aligned_cols=360 Identities=23% Similarity=0.344 Sum_probs=279.2
Q ss_pred cEEEEecEEEeecCCC-ceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 20 TMILHNAVIVTMDKES-RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~-~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
+++|+|++|++.++.. .++++++|+|+||+|++||+... ..+.++||+.|++|||||||+|+|+.........
T Consensus 2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~------~~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~ 75 (488)
T PRK06151 2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFD------GEVDRVIDAGNALVGPGFIDLDALSDLDTTILGL 75 (488)
T ss_pred eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCC------CCCCeEEeCCCCEEecCEEeeecccchhhhhccc
Confidence 6899999998877643 47899999999999999998432 1235899999999999999999998643222111
Q ss_pred CCCChhHhhhhccccc-------cCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----------CHHHHHHHHHHcC
Q 015784 99 DDVDLMTWLHDRIWPY-------ESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----------HVSEMAKAVELLG 161 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----------~~~~~~~~~~~~g 161 (400)
.+...|+....|+. ...+++++.+..++..+.+++++|+|++.|++.. ......+.+...|
T Consensus 76 --~~~~~~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~G 153 (488)
T PRK06151 76 --DNGPGWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLG 153 (488)
T ss_pred --ccchhHHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcC
Confidence 11225555544442 1357888999999999999999999999986421 2455677888899
Q ss_pred CeEEEecccccCCCCCC------cccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHc
Q 015784 162 LRACLVQSTMDCGEGLP------ASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (400)
+|...++..+..+.... +.+........+....++++++...+.+.++.+..++.....+++.+.++++.|+++
T Consensus 154 iR~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~~~~~s~e~l~~~~~~A~~~ 233 (488)
T PRK06151 154 LRVYLGPAYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDRIETCTVDLLRRTAAAAREL 233 (488)
T ss_pred CeEEecchhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCCCCCCCHHHHHHHHHHHHHC
Confidence 99988765543221111 111111223345566677777766666678888888888889999999999999999
Q ss_pred CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh---------hHHHHHHhcCCeEEECccc
Q 015784 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH---------TEIGLLSRAGVKVSHCPAS 306 (400)
Q Consensus 236 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~---------~~i~~~~~~~~~~~~~p~~ 306 (400)
|+++++|+.++..+.+.+.+.++. .+++++.+.+.++.+.+++|+.++++ ++++++++.|+.+++||.+
T Consensus 234 g~~v~~H~~e~~~~~~~~~~~~g~--~~~~~~~~~g~l~~r~~l~H~~~l~~~~~~~~~~~~~~~~la~~g~~v~~~P~~ 311 (488)
T PRK06151 234 GCPVRLHCAQGVLEVETVRRLHGT--TPLEWLADVGLLGPRLLIPHATYISGSPRLNYSGGDDLALLAEHGVSIVHCPLV 311 (488)
T ss_pred CCcEEEEECCchHHHHHHHHHcCC--CHHHHHHHcCCCCCCcEEEEEEEcCCccccccCCHHHHHHHHhcCCEEEECchh
Confidence 999999999888777777666554 48899999999999999999999999 9999999999999999998
Q ss_pred cccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 307 AMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 307 ~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
+.++ .+..|+++|+++|+++++|||+.+ .+++.+++.+....+... .....++++++|+++|.|||+++
T Consensus 312 ~~~~g~~~~p~~~l~~~Gv~v~lGtD~~~----~~~~~~~~~~~~~~~~~~------~~~~~~~~~~al~~aT~~~A~~l 381 (488)
T PRK06151 312 SARHGSALNSFDRYREAGINLALGTDTFP----PDMVMNMRVGLILGRVVE------GDLDAASAADLFDAATLGGARAL 381 (488)
T ss_pred hhhhccccccHHHHHHCCCcEEEECCCCC----ccHHHHHHHHHHHHHHhc------CCCCCCCHHHHHHHHHHHHHHHh
Confidence 8877 788999999999999999999743 468888888765543210 11234899999999999999999
Q ss_pred CCCCCccccccCcCC
Q 015784 386 LWDNDIGSLEAGKKV 400 (400)
Q Consensus 386 g~~~~~G~i~~G~~A 400 (400)
|+++ +|+|++|+.|
T Consensus 382 g~~~-~G~I~~G~~A 395 (488)
T PRK06151 382 GRDD-LGRLAPGAKA 395 (488)
T ss_pred CCCC-CcccCCCCcC
Confidence 9987 6999999987
|
|
| >PRK09229 N-formimino-L-glutamate deiminase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-44 Score=336.20 Aligned_cols=356 Identities=19% Similarity=0.224 Sum_probs=275.3
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeC-CEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQ-DRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~-g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
+++++++.+. ++ ++++++|+|+| |+|++||+... . +.++..|++|||||||+|+|+.++.+++..
T Consensus 4 ~~~~~~~~~~--~~---~~~~~~v~i~~~grI~~vg~~~~------~---~~~~~~g~~vlPGlVn~H~H~~~~~~rg~~ 69 (456)
T PRK09229 4 TLFAERALLP--DG---WARNVRLTVDADGRIAAVEPGAA------P---AGAERLAGPVLPGMPNLHSHAFQRAMAGLT 69 (456)
T ss_pred hHHHHHhhCC--Cc---cccCcEEEEecCCeEEEecCCCC------C---ccccccCcEEccCcccccccHhhHhhcCcc
Confidence 4556666663 33 56888999999 99999998532 1 123568999999999999999999999876
Q ss_pred CC-----CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------------CCHHHHHHHHHH
Q 015784 99 DD-----VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------------QHVSEMAKAVEL 159 (400)
Q Consensus 99 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------------~~~~~~~~~~~~ 159 (400)
.+ .++.+|+. .+|+....+++++.+..++..+.+++++|+||+.++.. ...+...+++.+
T Consensus 70 ~~~~~~~~~l~~w~~-~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e 148 (456)
T PRK09229 70 EVRGPPQDSFWSWRE-LMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAARA 148 (456)
T ss_pred cccCCCCCChHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHHH
Confidence 53 56678875 45777677899999999999999999999999998641 113667888999
Q ss_pred cCCeEEEecccccCCCC--CCccc----ccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHH
Q 015784 160 LGLRACLVQSTMDCGEG--LPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233 (400)
Q Consensus 160 ~g~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~ 233 (400)
.|+|..+++..+..... .++.. ............+++.+.+.. .+.+.+.++++..+..+++.++++++.|
T Consensus 149 ~GiR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~~A- 225 (456)
T PRK09229 149 AGIGLTLLPVLYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAA--LPGARLGLAPHSLRAVTPDQLAAVLALA- 225 (456)
T ss_pred cCCEEEeceeeeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcC--CCceEEEEeCCCCCCCCHHHHHHHHHHh-
Confidence 99999888766654211 11110 001112222222333333332 3568888889988999999999999999
Q ss_pred HcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cC
Q 015784 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LG 312 (400)
Q Consensus 234 ~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~ 312 (400)
++|+++++|+.|+..+.....+.++. .+++++.+.+.++.++++.|+.++++++++++++.|+.+++||.+|+++ .+
T Consensus 226 ~~g~~i~~H~~e~~~e~~~~~~~~g~--~~~~~l~~~g~l~~~~~l~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g 303 (456)
T PRK09229 226 APDGPVHIHIAEQTKEVDDCLAWSGA--RPVEWLLDHAPVDARWCLVHATHLTDAETARLARSGAVAGLCPTTEANLGDG 303 (456)
T ss_pred cCCCceEEEeCCCHHHHHHHHHHcCC--CHHHHHHHcCCCCCCeEEEeeccCCHHHHHHHHHcCCeEEECchhhhhhcCC
Confidence 99999999999988777777776664 4889999999999999999999999999999999999999999999887 88
Q ss_pred cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC-CCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 015784 313 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT-DPAALPAETVLRMATINGAKSVLWDNDI 391 (400)
Q Consensus 313 ~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~al~~~T~~~A~~lg~~~~~ 391 (400)
..|+++|+++|+++++|||++. ..+++.+|+.+....+.......... ..+.++++++|+++|.|+|+++|+ + +
T Consensus 304 ~~p~~~l~~~Gv~v~lGtD~~~---~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gA~alg~-~-~ 378 (456)
T PRK09229 304 IFPAVDYLAAGGRFGIGSDSHV---SIDLVEELRLLEYGQRLRDRRRNVLAAAAQPSVGRRLFDAALAGGAQALGR-A-I 378 (456)
T ss_pred CCCHHHHHHCCCeEEEecCCCC---CCCHHHHHHHHHHHHHHhhcCCcccccccccchHHHHHHHHHHHHHHHhCC-C-c
Confidence 9999999999999999999753 36899999998766543211111111 114678999999999999999999 3 7
Q ss_pred cccccCcCC
Q 015784 392 GSLEAGKKV 400 (400)
Q Consensus 392 G~i~~G~~A 400 (400)
|+|++||+|
T Consensus 379 GsLe~Gk~A 387 (456)
T PRK09229 379 GGLAVGARA 387 (456)
T ss_pred CCcCCCCcc
Confidence 999999987
|
|
| >TIGR02022 hutF formiminoglutamate deiminase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=331.45 Aligned_cols=356 Identities=19% Similarity=0.231 Sum_probs=273.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEe-CCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~-~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+.++|+++- ++ +.++.+|+|+ ||+|++||+.... ... .+..|++|||||||+|+|+.++.+++...
T Consensus 4 ~~~~~~~~~--~~---~~~~~~i~I~~~g~I~~vg~~~~~-----~~~---~~~~g~lvlPGfVn~H~H~~~~~~rg~~~ 70 (455)
T TIGR02022 4 YWAERALLP--DG---WAEGVRIAVAADGRILAIETGVPA-----APG---AERLSGPLLPGLANLHSHAFQRAMAGLAE 70 (455)
T ss_pred hhHHhccCC--Cc---cccCceEEEecCCEEEEecCCCCc-----ccc---cccCCCEEccCCcccCcchhhHhhcCCcc
Confidence 457777773 32 4577899999 9999999985431 112 23458999999999999999999998754
Q ss_pred -----CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------------CCHHHHHHHHHHc
Q 015784 100 -----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------------QHVSEMAKAVELL 160 (400)
Q Consensus 100 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------------~~~~~~~~~~~~~ 160 (400)
+.++.+|+. .+|+....+++++.+..++..+.+++++|+||+.++.. ...+...+++.+.
T Consensus 71 ~~~~~~~~l~~w~~-~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~ 149 (455)
T TIGR02022 71 VAGSGGDSFWTWRE-LMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFHYLHHAPDGTPYADPAEMAERIAAAAADA 149 (455)
T ss_pred cccCCCCCHHHHHH-HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeeeeecccCCCccccchhhhHHHHHHHHHHh
Confidence 247788976 56777778999999999999999999999999998531 1245778889999
Q ss_pred CCeEEEecccccCCC--CCCccc----ccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHH
Q 015784 161 GLRACLVQSTMDCGE--GLPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE 234 (400)
Q Consensus 161 g~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~ 234 (400)
|+|..+++.++.... +.++.. ..............+.+.+.. .+.+...+.++..+.++++.++++.+ +++
T Consensus 150 G~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~~s~e~l~~~~~-a~~ 226 (455)
T TIGR02022 150 GIGLTLLPVFYAHSGFGGAAPNPGQRRFIHDVERFARLVEVLRRELAA--QPAAVLGLAPHSLRAVTPEQLAAVLQ-ASD 226 (455)
T ss_pred CCeEEeeeeeeecCCCCCCCCcccchhhccCHHHHHHHHHHHHHHhcc--CCceEEEEecCCCCcCCHHHHHHHHH-HHh
Confidence 999988776654321 012110 001112222222333333322 24577778888888999999999999 889
Q ss_pred cCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCc
Q 015784 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGF 313 (400)
Q Consensus 235 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~ 313 (400)
+|+++++|+.|+..+.+...+.++. .+++++...|+++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+.
T Consensus 227 ~g~~v~~H~~e~~~e~~~~~~~~G~--~~v~~l~~~g~l~~~~~~~H~~~l~~~d~~~la~~g~~v~~~P~sn~~lg~g~ 304 (455)
T TIGR02022 227 RQAPVHIHVAEQQKEVDDCLAWSGR--RPVEWLLDHGPVDARWCLVHATHLTDEETALLARSGAVAGLCPTTEANLGDGI 304 (455)
T ss_pred CCCceEEEECCChHHHHHHHHHhCC--CHHHHHHHcCCCCCCEEEEEeecCCHHHHHHHHHcCCeEEEChhhhccccCCC
Confidence 9999999999998888777776664 4899999999999999999999999999999999999999999999988 889
Q ss_pred ccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCC-CCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 314 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANG-TTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 314 ~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
+|+++|+++|+++++|||+.. ..+++.+|+.+....+........ ...+..++.+++|+|+|.|+|++||++ +|
T Consensus 305 ~pi~~l~~~Gv~v~lGTD~~~---~~d~~~~m~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aT~~gAralg~~--~G 379 (455)
T TIGR02022 305 FPAVDFVAAGGRFGIGSDSHV---VIDVAEELRQLEYGQRLRDRARNVLAAGPGPSVGRALYDAALLGGAQALGLA--TG 379 (455)
T ss_pred CCHHHHHHCCCeEEEECCCCC---CCCHHHHHHHHHHHHHHHhcccccccCCcccchHHHHHHHHHHHHHHHhCCC--CC
Confidence 999999999999999999753 468999999987765532100000 011234778999999999999999993 79
Q ss_pred ccccCcCC
Q 015784 393 SLEAGKKV 400 (400)
Q Consensus 393 ~i~~G~~A 400 (400)
+|++||+|
T Consensus 380 sLe~Gk~A 387 (455)
T TIGR02022 380 GLRAGARA 387 (455)
T ss_pred ccCCCCCc
Confidence 99999987
|
In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate. |
| >KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-43 Score=305.00 Aligned_cols=358 Identities=27% Similarity=0.361 Sum_probs=297.1
Q ss_pred CCceeeceeEEEeC-CEEEEecCChhhhhhhc-----cCCCcEEeCCCcEeeecccccCcC-CcccccccccCCCChhHh
Q 015784 34 ESRVFRNGGVFVVQ-DRIKAIGQSADILQQFS-----QMADQIIDLQSQILLPGFVNTHVH-TSQQLAKGIADDVDLMTW 106 (400)
Q Consensus 34 ~~~~~~~~~i~v~~-g~I~~vg~~~~~~~~~~-----~~~~~viD~~g~~v~PG~iD~H~H-~~~~~~~~~~~~~~~~~~ 106 (400)
+..+.++..+.|.| |+|+.|++....+..+. .+..++++..|.++||||||.|+| ..+.+..+.+.+.++.+|
T Consensus 21 ~l~i~e~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~~s~~g~d~pll~w 100 (439)
T KOG3968|consen 21 ELEILEGSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFAMSGAGTDMPLLQW 100 (439)
T ss_pred ceEEecCcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhhhhccccCcHHHHH
Confidence 45577888889987 99999998654332111 124588999999999999999999 556666666678899999
Q ss_pred hhhccccccCCCCh-hhHHHHHHHHHHHHHhcCcceeeccCcCCH---HHHHHHHHHcCCeEEEecccccCCCCCCcccc
Q 015784 107 LHDRIWPYESNMTE-EDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMDCGEGLPASWA 182 (400)
Q Consensus 107 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 182 (400)
+.++.|+....++. ++.+......++.++++|+|++..+.+.+. ..+++.+...|.|..++..+++++. ++++++
T Consensus 101 l~~~~f~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~~~~~~s~~ll~~~~~~~G~R~~igkv~m~~~~-~~~p~~ 179 (439)
T KOG3968|consen 101 LGKYTFPLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFSTLHLDSELLLARAAIRAGQRALIGKVCMDCNA-HAVPKG 179 (439)
T ss_pred hhcceeecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhhccCchhHHHHHHHHHHhCCceeeeeehhccCC-CCCCcc
Confidence 99999999998888 555555556789999999999998775443 4568899999999999999999874 355555
Q ss_pred cCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCC
Q 015784 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG 262 (400)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~ 262 (400)
....+..+....+++....+...+.+.....++.....+.+.+.+..++++..++++.+|..+...+++++...++...+
T Consensus 180 ~~~~E~si~~t~~~i~~~~~~~~~~~~~~vt~~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff~~~~~ 259 (439)
T KOG3968|consen 180 VETTEESIESTEDLIPKLEKLKREKVNPIVTPRFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFFPEKLS 259 (439)
T ss_pred chhHHHHHHHHHHHHHHHHhhccCCCCCcccccccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhhhhccc
Confidence 56677778888888877777666665555566667788888999999999999999999999999999999999999888
Q ss_pred hHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCH
Q 015784 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSI 341 (400)
Q Consensus 263 ~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~ 341 (400)
+...+...+.++...++.|+.+++.++++.++++|..+++||.+|..+ .+++++++|++.||.|++|||..+ .++
T Consensus 260 y~~~yd~~~lL~~ktvlaH~~hl~d~ei~~l~k~g~svshCP~Sn~~L~sG~~~vr~lL~~~v~VgLGtDv~~----~s~ 335 (439)
T KOG3968|consen 260 YTDVYDKGGLLTEKTVLAHLEHLSDEEIELLAKRGCSVSHCPTSNSILGSGIPRVRELLDIGVIVGLGTDVSG----CSI 335 (439)
T ss_pred chHHHHHhcccchHhHhhhheecCchhHHHHHhcCCceEECCcchhhhccCCccHHHHHhcCceEeecCCccc----ccc
Confidence 999999999999999999999999999999999999999999999998 999999999999999999999764 346
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+++.+..+.+...-. .+..++|++|+|.+||.|+|++||+++..|+|++||.+
T Consensus 336 l~a~r~A~~~s~hL~~~----~~~~~Ls~~e~L~lATi~GA~aLg~d~~~Gs~eVGK~f 390 (439)
T KOG3968|consen 336 LNALRQAMPMSMHLACV----LDVMKLSMEEALYLATIGGAKALGRDDTHGSLEVGKYF 390 (439)
T ss_pred HHHHHHHHHHHHHHHhc----cCcccCCHHHHHHHHhccchhhccCCCcccceeccccc
Confidence 67777766555432111 14567999999999999999999999999999999975
|
|
| >PRK07213 chlorohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-41 Score=313.33 Aligned_cols=329 Identities=20% Similarity=0.302 Sum_probs=254.9
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++. ..+.+++|+|++|+|++|++.. .+.++||++|++| |||||+|+|+..+..++...+
T Consensus 2 ~li~~~~v~~~~~--~~~~~~~v~i~~g~I~~i~~~~--------~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~ 70 (375)
T PRK07213 2 LVYLNGNFLYGED--FEPKKGNLVIEDGIIKGFTNEV--------HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIG 70 (375)
T ss_pred EEEEeeEEEeCCC--CceeeeEEEEECCEEEEeccCC--------CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCC
Confidence 6899999998542 2456788999999999998741 1458999999999 999999999999888888877
Q ss_pred CChhHhhhh---ccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHHHHHHHHcCCeEEEecccccCC
Q 015784 101 VDLMTWLHD---RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCG 174 (400)
Q Consensus 101 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~ 174 (400)
.++.+|+.. ..+.....+++++.+..++..+.++++.|+|++.|+.... .+...+.....+++..+. ..
T Consensus 71 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~~~~~~~~~~~~a~~~~~~r~~~~----~~- 145 (375)
T PRK07213 71 KSLDELVKPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFREGGIKGINLLKKASSDLPIKPIIL----GR- 145 (375)
T ss_pred CCHHHHccCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhhhcChhHHHHHHHHHHcCCCceEEe----cC-
Confidence 788888642 1122235678889999999999999999999999964222 334455666667765421 00
Q ss_pred CCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHh
Q 015784 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (400)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (400)
+... ......+...+.++ ...+ ++++....++++.++.+++.|+++|+++++|+.|+..+.....
T Consensus 146 ---~~~~---~~~~~~~~~~~~~~----~~~g-----~~~~~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~ 210 (375)
T PRK07213 146 ---PTEA---DENELKKEIREILK----NSDG-----IGLSGANEYSDEELKFICKECKREKKIFSIHAAEHKGSVEYSL 210 (375)
T ss_pred ---CCcc---cchhhHHHHHHHHH----hccc-----ccccccccCCHHHHHHHHHHHHHcCCEEEEeeCCchhHHHHHH
Confidence 0000 01111111222222 1111 3455556778999999999999999999999999998877777
Q ss_pred hhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCC
Q 015784 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 255 ~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~ 333 (400)
+.++. .+++.+.+.|+. ++ .+.|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|+++||++++|||+.
T Consensus 211 ~~~G~--~~v~~~~~~G~~-~~-~i~H~~~~~~~~i~~la~~g~~v~~~P~sn~~l~~g~~~v~~l~~~Gv~v~lGTD~~ 286 (375)
T PRK07213 211 EKYGM--TEIERLINLGFK-PD-FIVHATHPSNDDLELLKENNIPVVVCPRANASFNVGLPPLNEMLEKGILLGIGTDNF 286 (375)
T ss_pred HHcCC--ChHHHHHhcCCC-CC-EEEECCCCCHHHHHHHHHcCCcEEECCcchhhhccCCccHHHHHHCCCEEEEeeCCC
Confidence 66664 478888888886 44 589999999999999999999999999999988 78999999999999999999987
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++ +..+++++|+.+.... +++++++|+++|.|+|++||+++ +|+|++||.|
T Consensus 287 ~~-~~~~~~~e~~~~~~~~--------------~~~~~~~l~~aT~~gA~~lg~~~-~G~l~~G~~A 337 (375)
T PRK07213 287 MA-NSPSIFREMEFIYKLY--------------HIEPKEILKMATINGAKILGLIN-VGLIEEGFKA 337 (375)
T ss_pred CC-chHhHHHHHHHHHHHh--------------CcCHHHHHHHHHHHHHHHhCCCC-cCCcCCCCcc
Confidence 65 4678999999865332 38999999999999999999976 8999999987
|
|
| >PRK09356 imidazolonepropionase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=291.74 Aligned_cols=345 Identities=19% Similarity=0.256 Sum_probs=229.2
Q ss_pred cccEEEEecEEEeecCCC----ceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccc
Q 015784 18 SSTMILHNAVIVTMDKES----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~----~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~ 93 (400)
+.+++|+|++|+++++.. +.+++++|+|+||||++||+..+.+. ..+.++||++|++|||||||+|+|+....
T Consensus 2 ~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~---~~~~~~iD~~g~~v~PG~id~H~Hl~~~~ 78 (406)
T PRK09356 2 MADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPA---AYAAEVIDAGGKLVTPGLIDCHTHLVFGG 78 (406)
T ss_pred CceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCcccccc---ccCceEEECCCCEEeeceEecCCCcccCC
Confidence 457999999999876543 67889999999999999998654321 11258999999999999999999997654
Q ss_pred cccc-----cCCCChhHhhhhc--c---ccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--CH---HHHHHHHH
Q 015784 94 AKGI-----ADDVDLMTWLHDR--I---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HV---SEMAKAVE 158 (400)
Q Consensus 94 ~~~~-----~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--~~---~~~~~~~~ 158 (400)
.++. ..+.++.+|+... + ++.....++++.+..++..+.++++.|+|++.+++.. .. ....+..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~ 158 (406)
T PRK09356 79 NRANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVAR 158 (406)
T ss_pred CcHHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHHH
Confidence 4331 1233445554321 1 1223446778888888888899999999999975311 11 11222233
Q ss_pred Hc----CCeEEEecccccCCCCCCcccccCCchHHHHHH-HHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHH
Q 015784 159 LL----GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233 (400)
Q Consensus 159 ~~----g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~ 233 (400)
.. +++... ... .+..++..... .....+... .+.++.+... +.+............+++.+.++++.|+
T Consensus 159 ~~~~~~~i~~~~--~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~l~~~~~~A~ 232 (406)
T PRK09356 159 RLGEEHPVDVVT--TFL-GAHAVPPEYKG-RPDAYIDLVCEEMLPAVAEE--GLADAVDVFCETGAFSVEQSERVLEAAK 232 (406)
T ss_pred HHhhhCCCceEe--eee-ecccCCccccC-CHHHHHHHHHHHHhHHHHhc--CCcceEEEEecCCCCCHHHHHHHHHHHH
Confidence 32 333211 111 11112322211 112222221 2233332221 2222222223344567899999999999
Q ss_pred HcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc--c
Q 015784 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM--L 311 (400)
Q Consensus 234 ~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~--~ 311 (400)
++|+++.+|+.+.... ..++.....+. ..+.|+.++++++++++++.|+.+++||.+++.+ .
T Consensus 233 ~~g~~v~~H~~~~~~~------------~~~~~~~~~~~----~~~~H~~~~~~~~~~~la~~g~~~~~~P~~~~~l~~~ 296 (406)
T PRK09356 233 ALGLPVKIHAEQLSNL------------GGAELAAEYGA----LSADHLEYLDEAGIAAMAEAGTVAVLLPGAFYFLRET 296 (406)
T ss_pred HCCCCEEEEEecccCC------------CHHHHHHHcCC----cEehHhhcCCHHHHHHHHHhCCEEEECccchhhcCcc
Confidence 9999999999764321 12333333332 3578999999999999999999999999998876 4
Q ss_pred CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 015784 312 GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (400)
Q Consensus 312 ~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~ 391 (400)
+..|+++|+++|+++++|||+.+. .+++..+........ ...+++++++++++|.|||+++|+++++
T Consensus 297 ~~~~~~~l~~~Gi~v~lgtD~~~~---~~~~~~~~~~~~~~~----------~~~~l~~~~~l~~~T~~~A~~~g~~~~~ 363 (406)
T PRK09356 297 QYPPARLLRDAGVPVALATDFNPG---SSPTESLLLAMNMAC----------TLFRLTPEEALAAVTINAARALGRQDTH 363 (406)
T ss_pred cCchHHHHHHCCCeEEEeCCCCCC---CChhHHHHHHHHHHh----------hhcCCCHHHHHHHHHHHHHHHhCCCCCc
Confidence 678999999999999999998542 234444544332211 1235899999999999999999998888
Q ss_pred cccccCcCC
Q 015784 392 GSLEAGKKV 400 (400)
Q Consensus 392 G~i~~G~~A 400 (400)
|+|++||.|
T Consensus 364 G~i~~G~~A 372 (406)
T PRK09356 364 GSLEVGKKA 372 (406)
T ss_pred eeeCCCCcC
Confidence 999999987
|
|
| >cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=291.84 Aligned_cols=338 Identities=18% Similarity=0.168 Sum_probs=230.3
Q ss_pred EEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCC
Q 015784 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (400)
Q Consensus 22 li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~ 101 (400)
.|+|++|+++. .++++|+|+||+|++|++..+. + ++.++||++|++|+|||||+|+|+.+...++...+.
T Consensus 1 ~~~~~~~~~~~-----~~~~~v~I~~g~I~~Vg~~~~~----~-~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~ 70 (398)
T cd01293 1 LLRNARLADGG-----TALVDIAIEDGRIAAIGPALAV----P-PDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNN 70 (398)
T ss_pred CeeeeEEeCCC-----ceEEEEEEECCEEEEEecCCCC----C-CCCceEeCCCCEEccCEeeeeeccCcccccCCCCCC
Confidence 48899999741 2677999999999999986542 1 356999999999999999999999877666654444
Q ss_pred ChhHhhhhc--cccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-------CHHHHHHHHHHcCCeEEEeccccc
Q 015784 102 DLMTWLHDR--IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------HVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 102 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
....|+... +++....+++++.+..+...+.++++.|||++.++... ..+...+.....+.+.......+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (398)
T cd01293 71 SGGTLLEAIIAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVDVDPAAGLKALEALLELREEWADLIDLQIVAFP 150 (398)
T ss_pred CccccHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeecccccccchHHHHHHHHHHHhhccceEEEEecc
Confidence 333443221 11223457888888888889999999999999875421 123344444444433322211111
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhH
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (400)
. ..... . ....+.++.+...+...+.. .........+++.+.++++.|+++|+++++|+.+...+...
T Consensus 151 ~-----~~~~~--~----~~~~~~v~~~~~~g~~~~~~-~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~ 218 (398)
T cd01293 151 Q-----HGLLS--T----PGGEELMREALKMGADVVGG-IPPAEIDEDGEESLDTLFELAQEHGLDIDLHLDETDDPGSR 218 (398)
T ss_pred C-----ccccC--C----CCHHHHHHHHHHhCCCEEeC-CCCCcCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCcchh
Confidence 1 00000 0 11223333333322222221 22222345678999999999999999999999877653222
Q ss_pred HhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-------hHHHHHHhcCCeEEECccccccc----------cCccc
Q 015784 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM----------LGFAP 315 (400)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-------~~i~~~~~~~~~~~~~p~~~~~~----------~~~~~ 315 (400)
..+ ..++.+...++. .+..+.|+.+++. +.+++++++|+.+++||.+++++ .+..|
T Consensus 219 ~~~------~~~~~~~~~g~~-~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~s~~~l~~~~~~~~~~~~~~~ 291 (398)
T cd01293 219 TLE------ELAEEAERRGMQ-GRVTCSHATALGSLPEAEVSRLADLLAEAGISVVSLPPINLYLQGREDTTPKRRGVTP 291 (398)
T ss_pred HHH------HHHHHHHHhCCC-CCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEEeCCCcchhhcccccCCCCCCCCCc
Confidence 111 145666777776 6788999998762 45999999999999999998654 45689
Q ss_pred HHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 015784 316 IKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (400)
Q Consensus 316 ~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~ 391 (400)
+++|+++|+++++|||++. +....+++.+++.+....+.. ...+.+++|+++|.|+|+++|+ +.
T Consensus 292 ~~~~~~~Gv~v~lGTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~al~~aT~~~A~~lg~--~~ 359 (398)
T cd01293 292 VKELRAAGVNVALGSDNVRDPWYPFGSGDMLEVANLAAHIAQLG----------TPEDLALALDLITGNAARALGL--ED 359 (398)
T ss_pred HHHHHHCCCeEEECCCCCCCCCcCCCCCCHHHHHHHHHHHHcCC----------ChhhHHHHHHhcChhhhhhcCC--cC
Confidence 9999999999999999842 223467888888765433211 1135689999999999999999 36
Q ss_pred cccccCcCC
Q 015784 392 GSLEAGKKV 400 (400)
Q Consensus 392 G~i~~G~~A 400 (400)
|+|++||.|
T Consensus 360 G~l~~Gk~A 368 (398)
T cd01293 360 YGIKVGCPA 368 (398)
T ss_pred cccccCCcc
Confidence 999999987
|
Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric. |
| >PRK09230 cytosine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=287.23 Aligned_cols=338 Identities=16% Similarity=0.179 Sum_probs=237.6
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
..++|+|++|+++. . ..+|+|+||+|++|++..+.+ ..+.++||++|++|||||||+|+|+.....++..
T Consensus 4 ~~~li~~~~~~~~~---~---~~~i~i~~g~I~~i~~~~~~~----~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~~ 73 (426)
T PRK09230 4 ALMTIKNARLPGKE---G---LWQITIEDGKISAIEPQSEAS----LEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGEP 73 (426)
T ss_pred ceEEEECcEEcCCC---e---eEEEEEECCEEEEecCCCCCC----CCCCceEeCCCCEeccceeEEEEccccceecCCC
Confidence 46899999998632 1 248999999999999864311 1245899999999999999999999887666644
Q ss_pred ---CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--C----HHHHHHHHHHcCCeEEEecc
Q 015784 99 ---DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--H----VSEMAKAVELLGLRACLVQS 169 (400)
Q Consensus 99 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--~----~~~~~~~~~~~g~~~~~~~~ 169 (400)
.+.++.+|+... ++.....++++.+..+...+.+++++|+|++.++... . .+.+.+..+..+-..-++..
T Consensus 74 ~~~~~~~l~~~i~~~-~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~~~~~~i~ 152 (426)
T PRK09230 74 NWNQSGTLFEGIERW-AERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAPWVDLQIV 152 (426)
T ss_pred ccCCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhCcceEEEE
Confidence 456688898764 5555667889999999999999999999999976421 1 12233333332221111111
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccC--CHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA--TDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
.+.....+.. ..... .++......... +...++..+.. +++.+..++++|+++|+++++|+.|..
T Consensus 153 a~~~~~~~~~----~~~~~-------~l~~a~~~~~~~--vg~~p~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E~~ 219 (426)
T PRK09230 153 AFPQEGILSY----PNGEA-------LLEEALRLGADV--VGAIPHFEFTREYGVESLHKAFALAQKYDRLIDVHCDEID 219 (426)
T ss_pred eccCccccCC----ccHHH-------HHHHHHHcCCCE--EeCCCCccccchhHHHHHHHHHHHHHHhCCCcEEEECCCC
Confidence 1111100111 01111 222222222221 22345554443 578999999999999999999999876
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC-------ChhHHHHHHhcCCeEEECccccccc----------
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSRAGVKVSHCPASAMRM---------- 310 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-------~~~~i~~~~~~~~~~~~~p~~~~~~---------- 310 (400)
.+...... ..++.+...+ ++.+.++.|+.++ ++++++++++.|+.+++||.+|+++
T Consensus 220 ~~~~~~~~------~~~~~~~~~g-l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~vv~cP~sn~~l~~~~~~~p~~ 292 (426)
T PRK09230 220 DEQSRFVE------TVAALAHREG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPKR 292 (426)
T ss_pred CcchHHHH------HHHHHHHHhC-CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCeEEECcchhhhhcCCCCCCCCC
Confidence 65432221 2678888888 6889999999999 5789999999999999999999865
Q ss_pred cCcccHHHHHHcCCcEEEcCCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCCCCCC-CHHHHHHHHhHHHHHHc
Q 015784 311 LGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAAL-PAETVLRMATINGAKSV 385 (400)
Q Consensus 311 ~~~~~~~~~~~~Gv~v~~gtD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~al~~~T~~~A~~l 385 (400)
.+..|+++|+++||+|++|||+... ....+++.+++......+.. .. +++++|+|+|.|||++|
T Consensus 293 ~g~~pi~~l~~aGv~V~lGTD~~~d~~~~~~~~d~~~~~~~~~~~~~~~-----------~~~~~~~~l~maT~~gA~al 361 (426)
T PRK09230 293 RGITRVKEMLEAGINVCFGHDDVFDPWYPLGTANMLQVLHMGLHVCQLM-----------GYGQINDGLNLITTHSARTL 361 (426)
T ss_pred CCCcCHHHHHHCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHHhhC-----------ChhhHHHHHHHHhcchhHHh
Confidence 4567899999999999999997521 12467888777654333211 01 36899999999999999
Q ss_pred CCCCCccccccCcCC
Q 015784 386 LWDNDIGSLEAGKKV 400 (400)
Q Consensus 386 g~~~~~G~i~~G~~A 400 (400)
|+++ .| |++||.|
T Consensus 362 g~~~-~g-le~G~~A 374 (426)
T PRK09230 362 NLQD-YG-IEVGNPA 374 (426)
T ss_pred CCCC-cC-CCCCCcC
Confidence 9987 68 9999987
|
|
| >PRK14085 imidazolonepropionase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-37 Score=285.00 Aligned_cols=340 Identities=17% Similarity=0.246 Sum_probs=222.8
Q ss_pred ccEEEEe-cEEEeecCCC-----ceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccc
Q 015784 19 STMILHN-AVIVTMDKES-----RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (400)
Q Consensus 19 ~~~li~n-~~i~~~~~~~-----~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~ 92 (400)
++++|+| +.|++++... +++++++|+|+||+|++|++..+. + .+.++||++|++|||||||+|+|+...
T Consensus 1 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~----~-~~~~~iD~~g~~v~PGlId~H~Hl~~~ 75 (382)
T PRK14085 1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADA----P-AADERVDAGGRAVLPGFVDSHSHLVFA 75 (382)
T ss_pred CcEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccC----C-CCCeEEeCCCCEEecCeEecCcCcccc
Confidence 3689999 5999987655 678999999999999999986432 1 246899999999999999999999764
Q ss_pred cccccc--CCCChhHhhhhcc---ccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--CHHHHHHHHHHcCCeEE
Q 015784 93 LAKGIA--DDVDLMTWLHDRI---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRAC 165 (400)
Q Consensus 93 ~~~~~~--~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--~~~~~~~~~~~~g~~~~ 165 (400)
..++.. ...+...|+.+.+ ++....++.++.+..+...+..++++|+|++.+.+.. ......+..+..+ +..
T Consensus 76 ~~r~~~~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~~~~~~~~~~~~~~~~~-~~~ 154 (382)
T PRK14085 76 GDRSAEFAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTGYGLTVEDEARSARIAA-EFT 154 (382)
T ss_pred CChhHHHHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCcCCCCHHHHHHHHHHHH-Hhh
Confidence 433210 0000011111111 1233456778888888889999999999999997532 2333333222211 110
Q ss_pred EecccccCCCCCCcccccCCchHHHHHHH-HHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecC
Q 015784 166 LVQSTMDCGEGLPASWAVRTTDDCIQSQK-ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (400)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~ 244 (400)
..... ..+..++..+. ......+.... ..+...... ...++++... ...+++.++++++.+++.|+++.+|+.
T Consensus 155 ~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~idi~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~ 228 (382)
T PRK14085 155 DEVTF-LGAHVVPPEYA-GDADEYVDLVCGPMLDAVAPH-ARWIDVFCER---GAFDEDQSRRVLTAGRAAGLGLRVHGN 228 (382)
T ss_pred hccee-eccccCCcccC-CCHHHHHHHHHHHHHHHHHHh-CCeEEEEecC---CCCCHHHHHHHHHHHHHcCCCeEEEeC
Confidence 00000 00111121111 12222222211 111112221 3345554322 246788999999999999999999997
Q ss_pred CCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcC
Q 015784 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHAD 323 (400)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~G 323 (400)
+.... ..++.+.+.|.. .++|+.++++++++++++.|+.+++||.+++.. .+..|+++|+++|
T Consensus 229 ~~~~~------------~~v~~~~~~g~~----~i~H~~~l~~~~~~~la~~gv~~~~~P~~~~~~~~~~~~~~~l~~aG 292 (382)
T PRK14085 229 QLGPG------------PGVRLAVELGAA----SVDHCTYLTDADVDALAGSGTVATLLPGAEFSTRQPYPDARRLLDAG 292 (382)
T ss_pred cccCC------------hHHHHHHHcCCC----cHHHhCCCCHHHHHHHHHcCCEEEECcHHHHhcCCCCchHHHHHHCC
Confidence 53210 134444555543 378999999999999999999999999998766 6678999999999
Q ss_pred CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 324 ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 324 v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++++|||+++.. .+...+........ ...+++++++++++|.|||++||+++ +|+|++||.|
T Consensus 293 v~v~lgsD~~~~~---~~~~~~~~~~~~~~----------~~~~l~~~~al~~aT~~~A~~lg~~~-~G~l~~G~~A 355 (382)
T PRK14085 293 VTVALASDCNPGS---SYTSSMPFCVALAV----------RQMGMTPAEAVWAATAGGARALRRDD-VGVLAVGARA 355 (382)
T ss_pred CcEEEEeCCCCCC---ChHHHHHHHHHHHH----------HhcCCCHHHHHHHHHHHHHHHcCCCC-CCCcCCCCCC
Confidence 9999999986431 12233333221110 13458999999999999999999985 7999999987
|
|
| >TIGR01224 hutI imidazolonepropionase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=282.13 Aligned_cols=322 Identities=20% Similarity=0.240 Sum_probs=217.3
Q ss_pred eceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc-----cCCCChhHhhhhc--c
Q 015784 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR--I 111 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~-----~~~~~~~~~~~~~--~ 111 (400)
++++|+|+||+|++||+....+. ..+.++||++|++|||||||+|+|+.....++. ..+.++.+|+... +
T Consensus 2 ~~~~v~i~~g~I~~vg~~~~~~~---~~~~~~iD~~g~~v~PGlin~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (377)
T TIGR01224 2 EDAVILIHGGKIVWIGQLAALPG---EEATEIIDCGGGLVTPGLVDPHTHLVFAGDRVNEFEMKLQGASYLEILAQGGGI 78 (377)
T ss_pred CceEEEEECCEEEEEechhhCCc---ccCCeEEeCCCCEEcccEEecccCccccCCcHHHHHHHhCCCCHHHHHHhcCCh
Confidence 57899999999999998543221 124689999999999999999999987655542 3566888998652 2
Q ss_pred ---ccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--cCCH-------HHHHHHHHHcCCeEEEecccccCCCCCCc
Q 015784 112 ---WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQHV-------SEMAKAVELLGLRACLVQSTMDCGEGLPA 179 (400)
Q Consensus 112 ---~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~~~~-------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 179 (400)
++.....++++.+..+...+.+++++|+|++.... +... +...+.....+++.... .... ..++.
T Consensus 79 ~~~~~~~~~~~~ed~~~~a~~~~~e~l~~Gvt~ve~~~~~g~~~~~~~~~~~a~~~~~~~~~i~~~~~--~~~~-~~~~~ 155 (377)
T TIGR01224 79 LSTVRATRAASEEELLKLALFRLKSMLRSGTTTAEVKSGYGLDLETELKMLRAAKALHEEQPVDVVTT--FLGA-HAVPP 155 (377)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEee--eeec-ccCCc
Confidence 25556788899999999999999999999995321 1111 12222233344544332 1111 11121
Q ss_pred ccccCCchHHHHHH-HHHHHHhccCC-CCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhc
Q 015784 180 SWAVRTTDDCIQSQ-KELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTR 257 (400)
Q Consensus 180 ~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~ 257 (400)
.... .....+... ...++++.... ...++ ..+++. ..+.+.+.++++.|+++|+++.+|+.+....
T Consensus 156 ~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~--~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~-------- 223 (377)
T TIGR01224 156 EFQG-RPDDYVDGICEELIPQVAEEGLASFAD-VFCEAG--VFSVEQSRRILQAAQEAGLPVKLHAEELSNL-------- 223 (377)
T ss_pred cccC-CHHHHHHHHHHHHHHHHHHhCCCCeeE-EEecCC--CcCHHHHHHHHHHHHHCCCCEEEEecCCCCC--------
Confidence 1101 111222211 22333332211 11122 133332 3456789999999999999999999874321
Q ss_pred CCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCC-C
Q 015784 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP-S 335 (400)
Q Consensus 258 ~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~-~ 335 (400)
..++.+...+. ..+.|+.++++++++++++.|+.+++||.+++.+ .+..|+++++++|+++++|||+.+ +
T Consensus 224 ----~~~~~~~~~g~----~~~~H~~~~~~~~l~~la~~g~~~~~~P~~~~~l~~~~~p~~~l~~~Gv~v~lgTD~~~~~ 295 (377)
T TIGR01224 224 ----GGAELAAKLGA----VSADHLEHASDAGIKALAEAGTVAVLLPGTTFYLRETYPPARQLIDYGVPVALATDLNPGS 295 (377)
T ss_pred ----CHHHHHHHcCC----CccHHHhcCCHHHHHHHHhcCCEEEECchHHHhcCCcCccHHHHHHCCCCEEEECCCCCCC
Confidence 13444444443 3467999999999999999999999999999887 678999999999999999999754 3
Q ss_pred CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 336 NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++..+++..+.... ...+++++++++++|.|||+++|+++++|+|++||.|
T Consensus 296 ~~~~~~~~~~~~~~--------------~~~~ls~~eal~~~T~~~A~~lg~~~~~G~l~~G~~A 346 (377)
T TIGR01224 296 SPTLSMQLIMSLAC--------------RLMKMTPEEALHAATVNAAYALGLGEERGTLEAGRDA 346 (377)
T ss_pred ChhHHHHHHHHHHH--------------HhcCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCcC
Confidence 22223333333221 1235999999999999999999999888999999987
|
This enzyme catalyzes the third step in histidine degradation. |
| >PRK07572 cytosine deaminase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-35 Score=272.64 Aligned_cols=337 Identities=15% Similarity=0.137 Sum_probs=225.6
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc-
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI- 97 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~- 97 (400)
++++|+|++|+++. ...+|+|+||+|++|++..+ ....++||+.|++|+|||||+|+|+..+..++.
T Consensus 2 ~~~~i~~~~i~~~~------~~~~i~i~~g~I~~v~~~~~------~~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~ 69 (426)
T PRK07572 2 FDLIVRNANLPDGR------TGIDIGIAGGRIAAVEPGLQ------AEAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLP 69 (426)
T ss_pred CcEEEECeEECCCC------eeEEEEEECCEEEEecCCCC------CCcCceEeCCCCEEcccceehhhCcchhhccCCC
Confidence 45789999999632 24589999999999998532 124589999999999999999999987654443
Q ss_pred --cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---CC---HHHHHHHHHHcCCeEEEecc
Q 015784 98 --ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QH---VSEMAKAVELLGLRACLVQS 169 (400)
Q Consensus 98 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~---~~---~~~~~~~~~~~g~~~~~~~~ 169 (400)
..+..+.+|+.-. -.....++.++.+......+..+++.|+|+++++.. .. .....+.....+-+..+...
T Consensus 70 ~~~~~g~l~e~l~~~-~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~~~~~~~~~ 148 (426)
T PRK07572 70 RVNASGTLLEGIALW-GELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVAPYLDLQLV 148 (426)
T ss_pred CCCCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhhccceEEEE
Confidence 3456777777321 122234678888888889999999999999999631 11 12222222222211111111
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCC--HHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT--DRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
.+.....+. . ........+.++ .+...+. ..++.....+ .+.++.+++.|+++|+++.+|+.++.
T Consensus 149 a~~~~g~~~------~-~~~~~~~~~~l~----~g~d~iG--g~p~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~ 215 (426)
T PRK07572 149 AFPQDGVLR------S-PGAVDNLERALD----MGVDVVG--GIPHFERTMADGAESVRLLCEIAAERGLRVDMHCDESD 215 (426)
T ss_pred eccChhhcc------C-ccHHHHHHHHHH----cCCCEEe--CCCCCccccchHHHHHHHHHHHHHHcCCCeEEEECCCC
Confidence 111100000 0 011111222222 2222222 2234333333 48999999999999999999998877
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-------hHHHHHHhcCCeEEECccccccc----------
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRM---------- 310 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-------~~i~~~~~~~~~~~~~p~~~~~~---------- 310 (400)
.......+ ...+.+.+.|+.+ +.++.|+..++. ++++++++.|+.+++||.+++.+
T Consensus 216 ~~~~~~~~------~~~~~~~~~G~~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv~~P~~n~~l~~~~~~~~~~ 288 (426)
T PRK07572 216 DPLSRHIE------TLAAETQRLGLQG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAIANPLINITLQGRHDTYPKR 288 (426)
T ss_pred ChhHHHHH------HHHHHHHHhCCCC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEEECchhhhhhcCCCCCCCCC
Confidence 65443332 1445667778877 788999988765 56999999999999999988754
Q ss_pred cCcccHHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 311 LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 311 ~~~~~~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
.+..++++|+++||++++|||+.. ++...++++.++.+....+.. . ...++++|+++|.|||++||
T Consensus 289 ~g~~~v~~l~~~GV~v~lGtD~~~~~~~~~~~~~~~e~~~~~~~~~~~~---------~-~~~l~~~l~~aT~~~A~~lg 358 (426)
T PRK07572 289 RGMTRVPELMAAGINVAFGHDCVMDPWYSLGSGDMLEVAHMGLHVAQMT---------G-QDAMRACFDAVTVNPARIMG 358 (426)
T ss_pred CCCcCHHHHHHCCCcEEEecCCCCCCCCCCCCCCHHHHHHHHHHHHcCC---------C-HHHHHHHHHHhhcchHHhhC
Confidence 356789999999999999999852 234578888887755443211 0 01346778899999999999
Q ss_pred CCCCccccccCcCC
Q 015784 387 WDNDIGSLEAGKKV 400 (400)
Q Consensus 387 ~~~~~G~i~~G~~A 400 (400)
+++ .| |++||.|
T Consensus 359 l~~-~g-i~~G~~A 370 (426)
T PRK07572 359 LEG-YG-LEPGCNA 370 (426)
T ss_pred CCC-cC-CCCCCcC
Confidence 987 57 9999987
|
|
| >COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=271.52 Aligned_cols=355 Identities=20% Similarity=0.169 Sum_probs=224.4
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
...++++.|++|+|++...+. ..+|+|+||||++||...++..... +.+++||++|++|+|||||+|.|+...+...
T Consensus 3 ~~adlil~nG~i~T~~~~~p~--aeAvaI~dGrI~avG~~~~~~~~~~-~~t~viDL~Gk~v~PGfvDaH~Hl~~~G~~~ 79 (535)
T COG1574 3 MAADLILHNGRIYTMDEARPT--AEAVAIKDGRIVAVGSDAELKALAG-PATEVIDLKGKFVLPGFVDAHLHLISGGLSL 79 (535)
T ss_pred cccceeEECCEEEeccCCCcc--eeEEEEcCCEEEEEcChHHHHhhcC-CCceEEeCCCCEeccccchhhHHHHHhhhhh
Confidence 346789999999999875553 3499999999999999887766443 5789999999999999999999987432211
Q ss_pred ---------------------------------ccCCCChh------------------------------Hhhhhccc-
Q 015784 97 ---------------------------------IADDVDLM------------------------------TWLHDRIW- 112 (400)
Q Consensus 97 ---------------------------------~~~~~~~~------------------------------~~~~~~~~- 112 (400)
.+.+.+.. .|++....
T Consensus 80 ~~~~~~~~~~~~~~~~~i~~~a~~~~~~~w~~~vG~g~~~~~~~~~~~t~~~lD~~~~~~Pv~l~r~~~H~a~~Ns~aL~ 159 (535)
T COG1574 80 LELNLDGVRSLDDLLAALRRQAARTPPGQWVVVVGWGWDEQFWEERLPTLAELDAAAPDHPVLLIRLDGHVAVANSAALR 159 (535)
T ss_pred hcccccccCCHHHHHHHHHHHHHhCCCCCceEEEEcChhhhccccCCCcHHHhhccCCCCCEEEEeccChHHHHhHHHHH
Confidence 00000000 01110000
Q ss_pred -------------------------------------cccCCCChhhHHHHHHH-HHHHHHhcCcceeeccCc--CCHH-
Q 015784 113 -------------------------------------PYESNMTEEDSYISTLL-CGIELIHSGVTCFAEAGG--QHVS- 151 (400)
Q Consensus 113 -------------------------------------~~~~~~~~~~~~~~~~~-~~~~~l~~GvTt~~~~~~--~~~~- 151 (400)
......+.+........ +.+.+.+.|+|++.++.. ....
T Consensus 160 ~~Gi~~~t~~p~gg~~~~d~~g~ptG~L~e~a~~~~~~~~~~~~~~~~~~~~~~~a~~~l~s~GiT~v~d~~~~~~~~~~ 239 (535)
T COG1574 160 LAGITRDTPDPPGGIIGRDADGEPTGLLLENAQALVARLAPPPSPAEELEAAAARAARELNSLGITGVHDMAGYQGYYAD 239 (535)
T ss_pred HcCCCCCCCCCCCCcccccCCCCCCeeehHhhHHHHHHhcCCCCchHHHHHHHHHHHHHHHhcCCeEEEcccccccchhH
Confidence 00001111111111112 556788899999999874 1111
Q ss_pred -HHHHH-HHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHH--HHHhccCCCCCeEEE----------------
Q 015784 152 -EMAKA-VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL--YAKHHHAADGRIRIW---------------- 211 (400)
Q Consensus 152 -~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---------------- 211 (400)
...+. .....+...+...++.... .......... ...+.+ .+.+|.+
T Consensus 240 ~~~~r~~~~~~~l~~rv~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~--~g~~K~f~Dgslg~rtA~l~~~y 306 (535)
T COG1574 240 YEAYRALAAGGELPVRVALLLFTEDL-----------KEERLDLLRQTGAKGLLQ--GGGVKLFADGSLGERTALLAAPY 306 (535)
T ss_pred HHHHHHHHhcCcceEEEEeeccccch-----------hhHHHhhcccCCccceee--cCceEEEEeCCCCcchhhccCcc
Confidence 12222 2222233222222221110 0000000000 000000 0111111
Q ss_pred ---eeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHH-HHhHhCCCCCCeeeEEecCCCh
Q 015784 212 ---FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIEFLQNNLLSAHTVWVNH 287 (400)
Q Consensus 212 ---~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~h~~~~~~ 287 (400)
..+.+....+++.+.++++.|.++|+++.+|+.++.+....+. ..| ...+.+..+.++.++|...+++
T Consensus 307 ~d~~~~~G~~l~~~e~l~~~v~~a~~~gl~v~vHAiGD~Av~~~Ld--------afE~~~~~~~~~~~r~rieH~~~v~~ 378 (535)
T COG1574 307 ADGPGPSGELLLTEEELEELVRAADERGLPVAVHAIGDGAVDAALD--------AFEKARKKNGLKGLRHRIEHAELVSP 378 (535)
T ss_pred cCCCCCCCCcccCHHHHHHHHHHHHHCCCcEEEEEechHHHHHHHH--------HHHHHhhhcCCccCCceeeeeeecCH
Confidence 0111345778999999999999999999999998877443222 222 2223334556899999999999
Q ss_pred hHHHHHHhcCCeEEECccccc-------------cccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcc
Q 015784 288 TEIGLLSRAGVKVSHCPASAM-------------RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKG 354 (400)
Q Consensus 288 ~~i~~~~~~~~~~~~~p~~~~-------------~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~ 354 (400)
++++++++.|+.+++||..-. +....+|++.|+++|++++.|||+|.. ..++|..+..+......
T Consensus 379 ~~i~R~~~Lgv~~svQP~f~~~~~~~~~~rlG~~r~~~~~p~~~ll~~G~~la~gSD~Pv~--~~dP~~~i~~AVtr~~~ 456 (535)
T COG1574 379 DQIERFAKLGVIASVQPNFLFSDGEWYVDRLGEERASRSYPFRSLLKAGVPLAGGSDAPVE--PYDPWLGIYAAVTRKTP 456 (535)
T ss_pred hHHHHHHhcCceEeeccccccccchHHHHhhhhhhhhccCcHHHHHHCCCeEeccCCCCCC--CCChHHHHHHHHcCCCC
Confidence 999999999999999998643 113456999999999999999999874 47899888888765432
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..... ..+..||++|||+++|.++|.+.|.++++|+|++||.|
T Consensus 457 ~g~~~---~~~~~L~~~eAL~~yT~~~A~a~~~e~~~G~Le~G~~A 499 (535)
T COG1574 457 GGRVL---GPEERLTREEALRAYTEGGAYASGAEGEKGSLEPGKLA 499 (535)
T ss_pred CCCCC---ccccccCHHHHHHHHhhhhHHhhhccccccccccCcee
Confidence 21110 01125999999999999999999999999999999987
|
|
| >cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=267.92 Aligned_cols=321 Identities=20% Similarity=0.262 Sum_probs=211.5
Q ss_pred EEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc-----cCCCChhHhhhhc---cc--
Q 015784 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR---IW-- 112 (400)
Q Consensus 43 i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~-----~~~~~~~~~~~~~---~~-- 112 (400)
|+|+||+|++|++..+.+... ..+.++||++|++|+|||||+|+|+..+..++. ..+..+.+|+... .|
T Consensus 1 i~i~~g~I~~ig~~~~~~~~~-~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (371)
T cd01296 1 IAIRDGRIAAVGPAASLPAPG-PAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTV 79 (371)
T ss_pred CEEECCEEEEEeCchhccccc-CCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHH
Confidence 579999999999865432100 124589999999999999999999987654431 2455677777641 11
Q ss_pred cccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--cCC---HHHHHHHHHHcCCe--EEEecccccCCCCCCcccccCC
Q 015784 113 PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQH---VSEMAKAVELLGLR--ACLVQSTMDCGEGLPASWAVRT 185 (400)
Q Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~~~---~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~ 185 (400)
+....+++++.+..+...+..++++|+|++.+.. ... .....+...+.+.+ ..+...... +..++.....
T Consensus 80 ~~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~-~~~~p~~~~~-- 156 (371)
T cd01296 80 RATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDLETELKMLRVIRRLKEEGPVDLVSTFLG-AHAVPPEYKG-- 156 (371)
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCHHHHHHHHHHHHHHHhhCCCceEeeeee-cccCCcccCC--
Confidence 3345678888889999999999999999998731 111 11233333333331 111111110 1112221100
Q ss_pred chHHHH-HHHHHHHHhc-cCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCCh
Q 015784 186 TDDCIQ-SQKELYAKHH-HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 263 (400)
Q Consensus 186 ~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 263 (400)
...... ...+.++.+. ......++.+ +.. ...+.+.+.++++.|+++|+++.+|+.+.... ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~A~~~g~~v~~H~~e~~~~------------~~ 221 (371)
T cd01296 157 REEYIDLVIEEVLPAVAEENLADFCDVF-CEK--GAFSLEQSRRILEAAKEAGLPVKIHADELSNI------------GG 221 (371)
T ss_pred hHHHHHHHHHHHHHHHHHhCCCCEEEEe-ecC--CccCHHHHHHHHHHHHHCCCeEEEEEcCcCCC------------CH
Confidence 011111 1233333322 1112233332 222 23457899999999999999999999875421 12
Q ss_pred HHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCC-CCCH
Q 015784 264 VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN-RMSI 341 (400)
Q Consensus 264 ~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~-~~~~ 341 (400)
++.....+. ..+.|+.++++++++++++.|+.+++||.+++.+ .+..|+++|+++|+++++|||+.+... ..++
T Consensus 222 ~~~~~~~g~----~~i~H~~~~~~~~i~~la~~g~~v~~~P~~~~~l~~~~~~~~~l~~~Gv~v~lgsD~~p~~~~~~~l 297 (371)
T cd01296 222 AELAAELGA----LSADHLEHTSDEGIAALAEAGTVAVLLPGTAFSLRETYPPARKLIDAGVPVALGTDFNPGSSPTSSM 297 (371)
T ss_pred HHHHHHcCC----CeeHHhcCCCHHHHHHHHHcCCeEEEChHHHHHhCCCCCCHHHHHHCCCcEEEecCCCCCCChHHHH
Confidence 333333333 3478999999999999999999999999998876 567899999999999999999743321 1124
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.++..+... .+++++++++++|.|||+++|+++++|+|++||+|
T Consensus 298 ~~~~~~~~~~--------------~~l~~~~al~~aT~~~A~~lg~~~~~G~i~~G~~A 342 (371)
T cd01296 298 PLVMHLACRL--------------MRMTPEEALTAATINAAAALGLGETVGSLEVGKQA 342 (371)
T ss_pred HHHHHHHHHh--------------cCCCHHHHHHHHHHHHHHHhCCCCCceeeCCCCCc
Confidence 4455444322 34899999999999999999998878999999987
|
In bacteria, the enzyme is part of histidine utilization (hut) operon. |
| >cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-34 Score=269.67 Aligned_cols=326 Identities=19% Similarity=0.228 Sum_probs=208.0
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++++ +.+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+.....
T Consensus 1 lli~~~~v~~~~~----~~~~~i~I~~g~I~~ig~~~~~-----~~~~~viD~~g~~vlPGlID~H~H~~~~~~------ 65 (447)
T cd01314 1 LIIKNGTIVTADG----SFKADILIEDGKIVAIGPNLEA-----PGGVEVIDATGKYVLPGGIDPHTHLELPFM------ 65 (447)
T ss_pred CEEECCEEECCCC----ceeeeEEEECCEEEEeeCCCCC-----CCCceEEECCCCEEecCEEecccccccccc------
Confidence 4799999998542 3568999999999999975321 123589999999999999999999965210
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEG 176 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (400)
...+.++.+..+ +.++.+|||++.++... ......+...... ......+.+..
T Consensus 66 ---------------~~~~~e~~~~~~----~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~ 122 (447)
T cd01314 66 ---------------GTVTADDFESGT----RAAAAGGTTTIIDFAIPNKGQSLLEAVEKWRGKA----DGKSVIDYGFH 122 (447)
T ss_pred ---------------CccCcchHHHHH----HHHHhCCCcEEEeCCCCCCCCCHHHHHHHHHHHh----cCCCcccEEEE
Confidence 112334444433 45678999999997632 1222222221110 01111111100
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
.. . .......+....++.+ .+...++.++.++..+..+++.+.++++.+++.++++++|+ |+..+.....+.
T Consensus 123 ~~--~-~~~~~~~~~~~~~l~~----~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-E~~~~~~~~~~~ 194 (447)
T cd01314 123 MI--I-TDWTDSVIEELPELVK----KGISSFKVFMAYKGLLMVDDEELLDVLKRAKELGALVMVHA-ENGDVIAELQKK 194 (447)
T ss_pred Ee--e-cCCChHHHHHHHHHHH----cCCCEEEEEeccCCCCCCCHHHHHHHHHHHHhcCCeEEEEc-CCHHHHHHHHHH
Confidence 00 0 0011222333333322 23345777777777788899999999999999999999996 666655444332
Q ss_pred c---CCCC-------ChH--H------HHhHhCCCCCCeeeEEecCCCh-hHHHHHHhcCCeE--EECccccccc-----
Q 015784 257 R---KVDH-------GTV--T------FLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKV--SHCPASAMRM----- 310 (400)
Q Consensus 257 ~---~~~~-------~~~--~------~l~~~~~~~~~~~~~h~~~~~~-~~i~~~~~~~~~~--~~~p~~~~~~----- 310 (400)
+ +... ++. + .+...+.++.+..+.|+..... ++++.+++.|+.+ .+||.+.+..
T Consensus 195 ~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~~~~~~~~H~s~~~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~ 274 (447)
T cd01314 195 LLAQGKTGPEYHALSRPPEVEAEATARAIRLAELAGAPLYIVHVSSKEAADEIARARKKGLPVYGETCPQYLLLDDSDYW 274 (447)
T ss_pred HHHcCCCChHHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEecCchhheeCHHHhc
Confidence 2 2110 011 1 1344456777888888876432 3578888888654 6899873311
Q ss_pred ----cC-----ccc---------HHHHHHcCCcEEEcCCCCCCCCCCCHHH--------------HHHHHHHHhcccccc
Q 015784 311 ----LG-----FAP---------IKEMLHADICVSLGTDGAPSNNRMSIVD--------------EMYLASLINKGREVF 358 (400)
Q Consensus 311 ----~~-----~~~---------~~~~~~~Gv~v~~gtD~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~ 358 (400)
.+ .+| +.+++++|+.+++|||+.+++...+++. ++++...+.+..
T Consensus 275 ~~~~~g~~~~~~pplr~~~~~~~l~~~l~~G~i~~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l~~l~~~~~--- 351 (447)
T cd01314 275 KDWFEGAKYVCSPPLRPKEDQEALWDGLSSGTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRMPLLWSEGV--- 351 (447)
T ss_pred cccccccceEECCCCCChHHHHHHHHHHhCCCeeEEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhHHHHHHHHH---
Confidence 11 134 4589999999999999987644333322 566655554322
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 359 ~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++++++|.|||++||+.+++|+|++|++|
T Consensus 352 -----~~~~~~~~~~~~~~t~~pA~~~gl~~~~G~l~~G~~A 388 (447)
T cd01314 352 -----AKGRITLEKFVELTSTNPAKIFGLYPRKGTIAVGSDA 388 (447)
T ss_pred -----HcCCCCHHHHHHHHhhHHHHHhCCCCCCCccCCCCcC
Confidence 1235999999999999999999997778999999987
|
The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues. |
| >PLN02942 dihydropyrimidinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-32 Score=261.49 Aligned_cols=330 Identities=18% Similarity=0.228 Sum_probs=207.6
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
++.+++|+|++|++.+. ...++|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+....+
T Consensus 3 ~~~~lli~~~~v~~~~~----~~~~~i~I~~g~I~~i~~~~~~-----~~~~~~iD~~g~~v~PG~ID~H~H~~~~~~-- 71 (486)
T PLN02942 3 SSTKILIKGGTVVNAHH----QELADVYVEDGIIVAVAPNLKV-----PDDVRVIDATGKFVMPGGIDPHTHLAMPFM-- 71 (486)
T ss_pred CCCcEEEECcEEEcCCC----CeEeEEEEECCEEEEEcCCCCC-----CCCCeEEECCCCEEecCEeeeeeccCcccC--
Confidence 45678999999998542 2457999999999999875321 124689999999999999999999976211
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC---CHHHHHHHHHHcCCeEEEecccccC
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAVELLGLRACLVQSTMDC 173 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (400)
.....++.+..+ ..++++||||+.|+... ......+.......+.. ++.
T Consensus 72 -------------------~~~~~ed~~s~s----~aAl~gGvTTv~D~~~~~~~~~~~~~~~~~~~~~~~~-----~d~ 123 (486)
T PLN02942 72 -------------------GTETIDDFFSGQ----AAALAGGTTMHIDFVIPVNGNLLAGYEAYEKKAEKSC-----MDY 123 (486)
T ss_pred -------------------CCcccchHHHHH----HHHHcCCCeEEEeCCCCCCCCHHHHHHHHHHHHhhcC-----CCE
Confidence 112334444444 56799999999997421 11122211111111110 111
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHH
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (400)
+...... . .......+..++.+.+ +...+++++.++..+..+++.+.+.++.+++.|+++++| .|+.......
T Consensus 124 ~~~~~~~--~-~~~~~~~e~~~l~~~~---gv~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H-aE~~~~~~~~ 196 (486)
T PLN02942 124 GFHMAIT--K-WDDTVSRDMETLVKEK---GINSFKFFMAYKGSLMVTDELLLEGFKRCKSLGALAMVH-AENGDAVFEG 196 (486)
T ss_pred EEEEEec--C-CcHhHHHHHHHHHHhC---CCceEEEEEecCCCCCCCHHHHHHHHHHHHhcCCeEEEE-cCCHHHHHHH
Confidence 1000000 0 0111122233332222 223467666666666778899999999999999999999 4665544322
Q ss_pred hhh---cCCCC-------Ch-------HH-HHhHhCCCCCCeeeEEecCCCh-hHHHHHHhcCCeEEECcccc-cc----
Q 015784 254 MDT---RKVDH-------GT-------VT-FLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVKVSHCPASA-MR---- 309 (400)
Q Consensus 254 ~~~---~~~~~-------~~-------~~-~l~~~~~~~~~~~~~h~~~~~~-~~i~~~~~~~~~~~~~p~~~-~~---- 309 (400)
.+. .+... ++ ++ .+...+..+.+..+.|+.+.+. ++++.+++.|+.++++|... +.
T Consensus 197 ~~~~~~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~~g~~~~i~H~s~~~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~ 276 (486)
T PLN02942 197 QKRMIELGITGPEGHALSRPPLLEGEATARAIRLAKFVNTPLYVVHVMSIDAMEEIARARKSGQRVIGEPVVSGLVLDDS 276 (486)
T ss_pred HHHHHHcCCCChhhhhccCCchHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEECchhheeCHH
Confidence 211 12100 12 32 2334466778899999999888 89999999998887666631 11
Q ss_pred --------c-cC---cccH---------HHHHHcCCcEEEcCCCCCCCCCCCHH--------------HHHHHHHHHhcc
Q 015784 310 --------M-LG---FAPI---------KEMLHADICVSLGTDGAPSNNRMSIV--------------DEMYLASLINKG 354 (400)
Q Consensus 310 --------~-~~---~~~~---------~~~~~~Gv~v~~gtD~~~~~~~~~~~--------------~~~~~~~~~~~~ 354 (400)
. .+ .+|+ .++++.|+++++|||+.+++...+.+ .+++....+.+.
T Consensus 277 ~~~~~~~~~~~~~k~~PPlr~~~~~~~L~~~l~~G~i~~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l~~~~~~~ 356 (486)
T PLN02942 277 KLWDPDFTIASKYVMSPPIRPAGHGKALQAALSSGILQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEERMHLVWDTM 356 (486)
T ss_pred HhcCcccccCcceEECCCCCCHHHHHHHHHHhcCCceEEEECCCCCCChHHhhcccCCHhhCCCCcccHHHHHHHHHHHH
Confidence 1 11 2465 48899999999999998764322221 023322222211
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
. ....++++++++++|.|||++||+.+++|+|++|++|
T Consensus 357 ~--------~~~~i~~~~~l~~~t~~pA~~lgl~~~~G~l~~G~~A 394 (486)
T PLN02942 357 V--------ESGQISPTDYVRVTSTECAKIFNIYPRKGAILAGSDA 394 (486)
T ss_pred H--------HcCCCCHHHHHHHHHHHHHHHhCCCCCCCCcCCCCcC
Confidence 1 1234899999999999999999998778999999987
|
|
| >PRK05985 cytosine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-32 Score=253.07 Aligned_cols=334 Identities=16% Similarity=0.174 Sum_probs=214.5
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|+++. ..+|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+.........
T Consensus 2 ~~~~i~~~~i~~~~-------~~~v~i~~g~i~~i~~~~~~-----~~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~~ 69 (391)
T PRK05985 2 TDLLFRNVRPAGGA-------AVDILIRDGRIAAIGPALAA-----PPGAEVEDGGGALALPGLVDGHIHLDKTFWGDPW 69 (391)
T ss_pred CCEEEECcEECCCC-------eeEEEEECCEEEEecCCCCC-----CCCCcEEECCCCEEecceEeeEEccCccccCCcc
Confidence 46899999999742 34899999999999986432 1245799999999999999999999764332211
Q ss_pred ----CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-------CCHHHHHHHHHHcCCeEEEe
Q 015784 99 ----DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACLV 167 (400)
Q Consensus 99 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-------~~~~~~~~~~~~~g~~~~~~ 167 (400)
....+.+++..... ....+.++.+..+...+..+++.|+|+++++.. ...+...+.... ++..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 145 (391)
T PRK05985 70 YPNEPGPSLRERIANERR--RRAASGHPAAERALALARAAAAAGTTAMRSHVDVDPDAGLRHLEAVLAARET--LRGLID 145 (391)
T ss_pred ccCCCCCCHHHHHHHHHH--hhccchhHHHHHHHHHHHHHHhcCcceEEeeEccCCCcccchHHHHHHHHHH--hhCccc
Confidence 11223333221100 123455566777777889999999999987531 123344444333 322111
Q ss_pred cccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 168 QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
...... +.......+. ..+.+++...... .+...+.++.....+++.+.++++.|+++|+++++|+.+..
T Consensus 146 ~~~v~~----~~~g~~~~~~-----~~~ll~~~l~~g~-~~~gg~~p~~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~~ 215 (391)
T PRK05985 146 IQIVAF----PQSGVLSRPG-----TAELLDAALRAGA-DVVGGLDPAGIDGDPEGQLDIVFGLAERHGVGIDIHLHEPG 215 (391)
T ss_pred EEEEec----cCccccCCcC-----HHHHHHHHHHcCC-CEEeCCCCCCcCCCHHHHHHHHHHHHHHhCCCcEEeeCCCC
Confidence 111111 1111100100 1133333332222 23444456666777889999999999999999999998765
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC---h----hHHHHHHhcCCeEEECccccccccCcccHHHHH
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---H----TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEML 320 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~---~----~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 320 (400)
........ ..++.....+..+ +..+.|+..+. + ++++++++.|+.+++|+... .+.+|+++|+
T Consensus 216 d~~~~~~~------~~~e~~~~~g~~~-~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~~~~~---~~~~~~~~l~ 285 (391)
T PRK05985 216 ELGAFQLE------RIAARTRALGMQG-RVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTNAPGS---VPVPPVAALR 285 (391)
T ss_pred CccHHHHH------HHHHHHHHhCCCC-CEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEeCCCC---CCCCCHHHHH
Confidence 42211110 0334444555433 67889998753 2 55799999999998885432 6788999999
Q ss_pred HcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccccc
Q 015784 321 HADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEA 396 (400)
Q Consensus 321 ~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~ 396 (400)
++|+++++|||++. +..+.+++..++.+....... .. -+++++|+++|.|||+++|+++ ++|++
T Consensus 286 ~~Gv~v~lGtD~~~~~~~p~~~~~~~~~~~~~~~~~~~~--------~~--~~~~~al~~~T~~~A~~lg~~~--~~l~~ 353 (391)
T PRK05985 286 AAGVTVFGGNDGIRDTWWPYGNGDMLERAMLIGYRSGFR--------TD--DELAAALDCVTHGGARALGLED--YGLAV 353 (391)
T ss_pred HCCCeEEEecCCCCCCCcCCCCCcHHHHHHHHHHHHccC--------Ch--HHHHHHHHHHcchhHHHhCCcc--cCCCC
Confidence 99999999999853 224567887777654433211 11 2468999999999999999986 35999
Q ss_pred CcCC
Q 015784 397 GKKV 400 (400)
Q Consensus 397 G~~A 400 (400)
||.|
T Consensus 354 G~~A 357 (391)
T PRK05985 354 GARA 357 (391)
T ss_pred CCcC
Confidence 9987
|
|
| >TIGR02033 D-hydantoinase D-hydantoinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-32 Score=260.08 Aligned_cols=326 Identities=17% Similarity=0.215 Sum_probs=204.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++++ ..+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 ~li~n~~vv~~~~----~~~~~V~I~dg~I~~Ig~~~~~-----~~~~~vIDa~G~~vlPGlID~H~H~~~~~------- 64 (454)
T TIGR02033 1 KLIRGGTVVNADD----VFQADVLIEGGKIVAVGRNLSP-----PDAVEEIDATGKYVMPGGIDVHTHLEMPF------- 64 (454)
T ss_pred CEEECcEEEcCCC----ceEEEEEEECCEEEEecCCCCC-----CCCCcEEECCCCEEecCEecceeccCccc-------
Confidence 4799999998653 2568999999999999975321 12358999999999999999999996511
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC----HHHHHHHHHHcCCeEEEecccccCCCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVELLGLRACLVQSTMDCGEG 176 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (400)
....+.++.+..+ +.++++|||++.+++... .....+........ ....+.+..
T Consensus 65 --------------~~~~~~e~~~~~s----~~a~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 122 (454)
T TIGR02033 65 --------------GGTVTADDFFTGT----KAAAAGGTTTIIDFALPHKGESLTEALETWHEKAEG----KSVIDYGFH 122 (454)
T ss_pred --------------CCCCCcchHHHHH----HHHHhCCCCEEEeCcCCCCCCCHHHHHHHHHHHhcc----CceEEEEEE
Confidence 0122334444443 457789999999986322 22223322222111 111111100
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
..... ..........+. +...+...++.+..++..+..+++.+.++++.+++.++++++|+ |+........+.
T Consensus 123 ~~~~~---~~~~~~~~~~~~---~~~~g~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~-E~~~~~~~~~~~ 195 (454)
T TIGR02033 123 MMITH---WNDEVLEEHIPE---LVEEGITSFKVFMAYKNLLMVDDEELFEILKRAKELGALLQVHA-ENGDVIAELQAR 195 (454)
T ss_pred ecccC---CcHHHHHHHHHH---HHhcCCcEEEEEeecCCCCCCCHHHHHHHHHHHHhCCCeEEEEc-CCHHHHHHHHHH
Confidence 00000 011112222222 22233345777777777788899999999999999999999997 665544322222
Q ss_pred c---CCCC-------Ch-------HH-HHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcCCe--EEECccccc-------
Q 015784 257 R---KVDH-------GT-------VT-FLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPASAM------- 308 (400)
Q Consensus 257 ~---~~~~-------~~-------~~-~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~~~--~~~~p~~~~------- 308 (400)
+ +... ++ ++ .+...+..+.+..+.|.... +-++++.+++.|+. +.+||.+++
T Consensus 196 ~~~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~~~~~~i~H~s~~~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~ 275 (454)
T TIGR02033 196 LLAQGKTGPEYHALSRPPESEAEAVARAIALAALANAPLYVVHVSTASAVDEIAEAREKGQPVYGETCPQYLLLDDTIYD 275 (454)
T ss_pred HHHcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCchheeecHHHhc
Confidence 1 2100 11 11 13333455667777777762 24678888888844 669998753
Q ss_pred ----cc-cCc--cc---------HHHHHHcCCcEEEcCCCCCCCC----------------CCCHHHHHHHHHHHhcccc
Q 015784 309 ----RM-LGF--AP---------IKEMLHADICVSLGTDGAPSNN----------------RMSIVDEMYLASLINKGRE 356 (400)
Q Consensus 309 ----~~-~~~--~~---------~~~~~~~Gv~v~~gtD~~~~~~----------------~~~~~~~~~~~~~~~~~~~ 356 (400)
+. .+. +| +..++++|+.+++|||+.+++. +...+ ++.+...+.+..
T Consensus 276 ~~~~~~~~~~~~pPlr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~-e~~l~~l~~~~v- 353 (454)
T TIGR02033 276 KPGFEGAKYVCSPPLREKEDQDALWSALSSGALQTVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGV-EERMTLLFDEGV- 353 (454)
T ss_pred CcccccceeEECCCCCChhhHHHHHHHhhcCCeEEEECCCCCCCHHHhhhcccCCHhhCCCCCchH-HhHHHHHHHHHH-
Confidence 22 122 46 4589999999999999987631 11112 555555443221
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 357 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 357 ~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++++++|.|||++||+++++|+|++|+.|
T Consensus 354 -------~~~~~~~~~~~~~~t~~pa~~~gl~~~~G~l~~G~~A 390 (454)
T TIGR02033 354 -------ATGRITLEKFVELTSTNPAKIFNMYPRKGTIAVGSDA 390 (454)
T ss_pred -------HcCCCCHHHHHHHHhhHHHHHcCCCCCCCccccCCcC
Confidence 1234899999999999999999997768999999987
|
This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme. |
| >COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=253.73 Aligned_cols=337 Identities=20% Similarity=0.252 Sum_probs=209.2
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCCh-hhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSA-DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~-~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~ 95 (400)
....+++.+++.+++ ...++++.|+|+||||+.||+.. +. +.+.++||++|++|+|||||+|+|+.....+
T Consensus 8 ~~~~~~~~~~~~~~~---~~~i~~~~v~i~~GkI~~vg~~~~~~-----~~~~~viD~~G~~V~PGLID~HtHl~~~~~~ 79 (406)
T COG1228 8 NIAMLATLAGRGLPG---LGIIEDGAVLIEDGKIVAVGPEEIDI-----PAGAEVIDAKGKTVTPGLIDAHTHLGFGGSR 79 (406)
T ss_pred hhhhheeeccccCCC---cceeecceEEEECCEEEEecCcccCC-----CCCCeEEeCCCCEEccceeeccccccccCCc
Confidence 345678888888864 34567799999999999999873 32 2357999999999999999999999875544
Q ss_pred ccc-----CCCChhHhhh--hccccccCCCCh---hhHHHHHHHHHHHHHhcCcceeeccCcCCHHH-----HHHHHHHc
Q 015784 96 GIA-----DDVDLMTWLH--DRIWPYESNMTE---EDSYISTLLCGIELIHSGVTCFAEAGGQHVSE-----MAKAVELL 160 (400)
Q Consensus 96 ~~~-----~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~-----~~~~~~~~ 160 (400)
... .+.++...+. +..++....+.. ..........+..++.+|+|+........... ..+.....
T Consensus 80 ~~~~~~~~~~~~~~~i~~~~~gi~~~~~~~~~a~~~g~~~~~~~~l~~~~~~g~~~~e~~~~~g~~~~~e~~~~~~~~~~ 159 (406)
T COG1228 80 GGEFELREAGASYTEILAAGGGILPLDRGFTTARDGGLKATALPRLKRAGSAGVTTGERKSGYGLDLETEGGHLRAAAGL 159 (406)
T ss_pred cchhhhcccCccHHHHHHhcCChhhhHHHHHHHhhcchHHHHHHHHHHHHHcCCcccceeeeecccccccccccchhhhc
Confidence 321 1223332222 122222222111 12222344456778889999988754322211 11111111
Q ss_pred C--CeEEEecccccCCCCCCcccccCCchHHHHHHHHH-HHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCC
Q 015784 161 G--LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL-YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 237 (400)
Q Consensus 161 g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~ 237 (400)
+ .......... .....+. ... .....+...... ++..... +.....-........++++++++++.+++.++
T Consensus 160 ~~~~~~~~~~t~~-~~~~~~~-~~~-~~r~~~~~g~~~~i~~~a~~--~l~~~~d~~~~~~~fs~~e~~~~l~~a~~~g~ 234 (406)
T COG1228 160 KESRPVAVGSTPL-AAHGVPE-ERK-ATREAYVAGARLLIKIVATG--GLASFVDAFCEGGQFSPEEIRAVLAAALKAGI 234 (406)
T ss_pred cccccccccCccc-cccCCcc-ccc-chHHHHHHHHHHHHHHHHhc--cccchhhccccccccCHHHHHHHHHHHHHCCC
Confidence 1 1111111111 1111111 111 122222222222 3333321 11111111334456788889999999999999
Q ss_pred eeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHh--cCC-eEEECccccccc--cC
Q 015784 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR--AGV-KVSHCPASAMRM--LG 312 (400)
Q Consensus 238 ~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~--~~~-~~~~~p~~~~~~--~~ 312 (400)
++.+|+.+.+. +....+.+. ..+.|+..++.+.++.+++ .|+ ..+..|...+.+ ..
T Consensus 235 ~v~~HA~~~~g---------------~~~A~~~g~----~s~~H~~~ld~~~~~~~a~~~~g~~~~~l~p~~~~~l~e~~ 295 (406)
T COG1228 235 PVKAHAHGADG---------------IKLAIRLGA----KSAEHGTLLDHETAALLAEKGAGTPVPVLLPRTKFELRELD 295 (406)
T ss_pred ceEEEecccch---------------HHHHHHhCc----ceehhhhhcCHhHHHHHhhccCCCccccccchhhhhhhccc
Confidence 99999987662 122223332 2378999999999999999 776 346666665555 44
Q ss_pred cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 313 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 313 ~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
..+++.|++.||+++++||+++.+...++..+|..++. .++|++|||+++|.|||++||+++++|
T Consensus 296 ~~~~~~l~~~GV~vai~TD~~~~~~~~~l~~~m~l~~~---------------~gmtp~EaL~a~T~naA~alG~~~~~G 360 (406)
T COG1228 296 YKPARKLIDAGVKVAIGTDHNPGTSHGSLALEMALAVR---------------LGMTPEEALKAATINAAKALGLADKVG 360 (406)
T ss_pred chhHHHHHHCCCEEEEEcCCCCCchhhHHHHHHHHHHH---------------cCCCHHHHHHHHHHHHHHHcCCccccc
Confidence 67899999999999999999877323344444444442 249999999999999999999999999
Q ss_pred ccccCcCC
Q 015784 393 SLEAGKKV 400 (400)
Q Consensus 393 ~i~~G~~A 400 (400)
+|++||.|
T Consensus 361 sle~Gk~A 368 (406)
T COG1228 361 SLEPGKDA 368 (406)
T ss_pred cccCCCcc
Confidence 99999987
|
|
| >PRK07583 cytosine deaminase-like protein; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-31 Score=246.76 Aligned_cols=347 Identities=18% Similarity=0.150 Sum_probs=215.9
Q ss_pred CCCCcccEEEEecEEEeecCCC--------ceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeeccccc
Q 015784 14 SLGSSSTMILHNAVIVTMDKES--------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNT 85 (400)
Q Consensus 14 ~~~~~~~~li~n~~i~~~~~~~--------~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~ 85 (400)
+.+++..++|+|+++-+..... .-....+|.|+||+|++|++.... ..+.++||++|++|+|||||+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~-----~~~~~~id~~g~~v~Pg~id~ 80 (438)
T PRK07583 6 SLPESGRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGA-----PDELPAVDLKGRMVWPCFVDM 80 (438)
T ss_pred cCCCCCcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCC-----CCCCceecCCCCcccCCcccc
Confidence 4556778999999975433221 122456999999999999986431 125689999999999999999
Q ss_pred CcCCcccccccc--cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC----c---CCHHHHHHH
Q 015784 86 HVHTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----G---QHVSEMAKA 156 (400)
Q Consensus 86 H~H~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~----~---~~~~~~~~~ 156 (400)
|+|+........ ....++.+.+..........++.++...........++..|+|+++... . ...+...+.
T Consensus 81 H~Hld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~vd~~~~~~~~~~~~i~~~ 160 (438)
T PRK07583 81 HTHLDKGHIWPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHLDSFAPQAAISWEVFAEL 160 (438)
T ss_pred eeccccceecCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeeeccCCCCcccHHHHHHHH
Confidence 999977654432 1223344332211100011233455445555677889999999665422 1 112223233
Q ss_pred HHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcC
Q 015784 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (400)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~ 236 (400)
.+...-+....-..+ ++.+....... .+..+.+.+ . .+.+.. .+... ...++.+.++++.|+++|
T Consensus 161 ~~~~~~~~~~~~v~~-----~p~~~~~~~~~---~eL~~~v~~---~-~gv~g~--~~~~~-~~~d~~l~~i~~lA~~~G 225 (438)
T PRK07583 161 REAWAGRIALQAVSL-----VPLDAYLTDAG---ERLADLVAE---A-GGLLGG--VTYMN-PDLDAQLDRLFRLARERG 225 (438)
T ss_pred HHHhhccCeEEEEEe-----cChhhccCchH---HHHHHHHHH---c-CCEEeC--CCCCC-CCHHHHHHHHHHHHHHhC
Confidence 333222211111110 11111111111 222222222 1 122221 11111 125678999999999999
Q ss_pred CeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC-------hhHHHHHHhcCCeEEECcccccc
Q 015784 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------HTEIGLLSRAGVKVSHCPASAMR 309 (400)
Q Consensus 237 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-------~~~i~~~~~~~~~~~~~p~~~~~ 309 (400)
+++.+|+.+........... ..+.+...+.. .+.++.|+..++ .++++++++.|+.+++||.+++.
T Consensus 226 ~~v~vH~~E~~~~~~~~l~~------~~~~~~~~G~~-~~v~i~H~~~l~~~~~~~~~~~i~~la~~gv~vv~~P~~~~~ 298 (438)
T PRK07583 226 LDLDLHVDETGDPASRTLKA------VAEAALRNGFE-GKVTCGHCCSLAVQPEEQAQATIALVAEAGIAIVSLPMCNLY 298 (438)
T ss_pred CCcEEeECCCCCchHHHHHH------HHHHHHHhCCC-CCEEEEeccchhcCCHHHHHHHHHHHHHcCCeEEECcchhhh
Confidence 99999998765432221111 23444455553 368899999876 46799999999999999998864
Q ss_pred c-----------cCcccHHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 310 M-----------LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 310 ~-----------~~~~~~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
+ .+..|+++|+++|+++++|||+.. +....+++..+..+....+ .+.+++++|
T Consensus 299 l~~~~~~~~p~~~~~~~v~~l~~aGV~valGtD~~~d~~~p~g~~~~~~~~~~a~~~~~------------~~~~~~~al 366 (438)
T PRK07583 299 LQDRQPGRTPRWRGVTLVHELKAAGIPVAVASDNCRDPFYAYGDHDMLEVFREAVRILH------------LDHPYDDWP 366 (438)
T ss_pred hcCCCcCCCCCCCCcchHHHHHHCCCeEEEEeCCCCCCCCCCCCcCHHHHHHHHHHHHh------------cCCcHHHHH
Confidence 4 244689999999999999999842 1134677777776654332 136899999
Q ss_pred HHHhHHHHHHcCCCCCccccccCcCC
Q 015784 375 RMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 375 ~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++|.|||+++|+++ +|+|++|+.|
T Consensus 367 ~~~T~~~A~~lg~~~-~G~i~~G~~A 391 (438)
T PRK07583 367 AAVTTTPADIMGLPD-LGRIAVGAPA 391 (438)
T ss_pred HHHhHHHHHHcCCCC-CCCcCCCCCC
Confidence 999999999999987 7999999987
|
|
| >PRK12394 putative metallo-dependent hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-31 Score=242.09 Aligned_cols=311 Identities=14% Similarity=0.159 Sum_probs=198.5
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|+++.. ....+.+|+|+||+|++|++... ....++||++|++|+|||||+|+|+......
T Consensus 3 ~~~li~~~~i~~~~~--~~~~~~~i~i~~g~I~~i~~~~~------~~~~~viD~~g~~v~PGliD~H~H~~~~g~~--- 71 (379)
T PRK12394 3 NDILITNGHIIDPAR--NINEINNLRIINDIIVDADKYPV------ASETRIIHADGCIVTPGLIDYHAHVFYDGTE--- 71 (379)
T ss_pred ccEEEECcEEECCCC--CcccccEEEEECCEEEEEcCCCC------CCCCeEEECCCCEEECCEEEeeecCCCCCcc---
Confidence 468999999996542 23456789999999999987432 1245899999999999999999999531100
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHH---HHHHHHcCCeEEEeccccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEM---AKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~---~~~~~~~g~~~~~~~~~~~ 172 (400)
...+++ ..++++|+|++.+++... .... .....+.+++.++......
T Consensus 72 -----------------~~~~~~----------~~~l~~G~Ttv~d~g~~~~~~~~~~~~~~~a~~~~gira~l~~~~~~ 124 (379)
T PRK12394 72 -----------------GGVRPD----------MYMPPNGVTTVVDAGSAGTANFDAFYRTVICASKVRIKAFLTVSPPG 124 (379)
T ss_pred -----------------cccCHH----------HHHHhCCccEEEECCCCCcccHHHHHHHHhhhhcceeeeEEeeeccc
Confidence 011111 237889999999986321 2222 2235666788777655442
Q ss_pred CCCCCCcccccCCch-HHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh
Q 015784 173 CGEGLPASWAVRTTD-DCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (400)
... .......... ....+..++++.+..... .+++.+.+......+++.+.+.++.|++.|+++++|+.+...+..
T Consensus 125 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~ki~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~ 201 (379)
T PRK12394 125 QTW--SGYQENYDPDNIDENKIHALFRQYRNVLQ-GLKLRVQTEDIAEYGLKPLTETLRIANDLRCPVAVHSTHPVLPMK 201 (379)
T ss_pred ccc--cCcccccChhHCCHHHHHHHHHHCcCcEE-EEEEEEecccccccchHHHHHHHHHHHHcCCCEEEEeCCCCccHH
Confidence 211 0000000111 113445555555443221 123322222212567889999999999999999999987654321
Q ss_pred HHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC------C-----hhHHHHHHhcCCeE-EECccccccccCcccHHHH
Q 015784 252 VVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV------N-----HTEIGLLSRAGVKV-SHCPASAMRMLGFAPIKEM 319 (400)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~------~-----~~~i~~~~~~~~~~-~~~p~~~~~~~~~~~~~~~ 319 (400)
+..+.+....++.|+.+. + .++++.+++.|+.+ +.++.++. ......++
T Consensus 202 ----------------~~~~~l~~g~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~s~~---~~~~~~~~ 262 (379)
T PRK12394 202 ----------------ELVSLLRRGDIIAHAFHGKGSTILTEEGAVLAEVRQARERGVIFDAANGRSHF---DMNVARRA 262 (379)
T ss_pred ----------------HHHHhcCCCCEEEecCCCCCCCcCCCCCCChHHHHHHHhCCeEEEecCCcccc---chHHHHHH
Confidence 223334444567888762 2 34677788899876 66665543 22345688
Q ss_pred HHcCC-cEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCc
Q 015784 320 LHADI-CVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (400)
Q Consensus 320 ~~~Gv-~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~ 398 (400)
+++|+ ++++|||+.+++...+++..|.... .+.. +.+++++++++++|.|||+++|+++++|+|++|+
T Consensus 263 l~~G~~~~~lgTD~~~~~~~~~~~~~l~~~~--~~~~---------~~~~~~~~~~~~at~~~a~~~g~~~~~G~i~~G~ 331 (379)
T PRK12394 263 IANGFLPDIISSDLSTITKLAWPVYSLPWVL--SKYL---------ALGMALEDVINACTHTPAVLMGMAAEIGTLAPGA 331 (379)
T ss_pred HHCCCCceEEECCCCCCCcccCccchHHHHH--HHHH---------HcCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCC
Confidence 99995 9999999987644334433333322 1111 3469999999999999999999975579999999
Q ss_pred CC
Q 015784 399 KV 400 (400)
Q Consensus 399 ~A 400 (400)
.|
T Consensus 332 ~A 333 (379)
T PRK12394 332 FA 333 (379)
T ss_pred cc
Confidence 87
|
|
| >PRK08323 phenylhydantoinase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-31 Score=254.44 Aligned_cols=323 Identities=17% Similarity=0.185 Sum_probs=201.3
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++ +.+++|+|+||+|++|++. . +.++||++|++|+|||||+|+|+...
T Consensus 2 d~li~n~~v~~~~~----~~~~~v~I~~g~I~~i~~~-~--------~~~viD~~g~~v~PGlID~H~H~~~~------- 61 (459)
T PRK08323 2 STLIKNGTVVTADD----TYKADVLIEDGKIAAIGAN-L--------GDEVIDATGKYVMPGGIDPHTHMEMP------- 61 (459)
T ss_pred cEEEECCEEEcCCC----ceEEEEEEECCEEEEEecC-C--------CceEEECCCCEEeccEEeeeeccccc-------
Confidence 58999999998542 3468999999999999874 1 35899999999999999999999541
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGE 175 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (400)
.......++.+..+ +.++++|+|++.++... ......+........ ....+.+.
T Consensus 62 --------------~~~~~~~e~~~~~~----~~a~~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~~~----~~~~d~~~ 119 (459)
T PRK08323 62 --------------FGGTVSSDDFETGT----RAAACGGTTTIIDFALQPKGQSLREALEAWHGKAAG----KAVIDYGF 119 (459)
T ss_pred --------------cCCccccCcHHHHH----HHHHhCCCCEEEeCcCCCCCCChHHHHHHHHHHhcc----CceEEEEE
Confidence 00111233333332 45778999999997522 122222222221110 00111110
Q ss_pred CCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh
Q 015784 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (400)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (400)
..... ......+.+..+++ ..+...+++++.++..+..+++.+.++++.++++|+++++|+ ++........+
T Consensus 120 ~~~~~---~~~~~~~~~~~~~~----~~g~~~ik~~~~~~~~~~~s~~~l~~~~~~a~~~g~~v~~H~-e~~~~~~~~~~ 191 (459)
T PRK08323 120 HMIIT---DWNEVVLDEMPELV----EEGITSFKLFMAYKGALMLDDDELLRALQRAAELGALPMVHA-ENGDAIAYLQA 191 (459)
T ss_pred EEEec---CCcHHHHHHHHHHH----HcCCCEEEEEEecCCCCCCCHHHHHHHHHHHHhcCCEEEEEc-CChHHHHHHHH
Confidence 00000 01112223333332 222235777666666678899999999999999999999996 65554433222
Q ss_pred hc---CC-------CCChHH--------HHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcCCe--EEECcc------ccc
Q 015784 256 TR---KV-------DHGTVT--------FLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPA------SAM 308 (400)
Q Consensus 256 ~~---~~-------~~~~~~--------~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~~~--~~~~p~------~~~ 308 (400)
.+ +. ..++.+ .+...+..+.+..+.|.... +-++++.+++.|+. +.+||. +++
T Consensus 192 ~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~~~~~~i~H~s~~~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~ 271 (459)
T PRK08323 192 KLLAEGKTGPEYHALSRPPEVEGEATNRAIMLAELAGAPLYIVHVSCKEALEAIRRARARGQRVFGETCPQYLLLDESEY 271 (459)
T ss_pred HHHHcCCCChhhhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCeEEEEcCccceeecHHHh
Confidence 21 11 001221 24444666677777787764 33467777888866 458988 444
Q ss_pred cc-c---Cc-----cc---------HHHHHHcCCcEEEcCCCCCCCCCCCHH---------------HHHHHHHHHhccc
Q 015784 309 RM-L---GF-----AP---------IKEMLHADICVSLGTDGAPSNNRMSIV---------------DEMYLASLINKGR 355 (400)
Q Consensus 309 ~~-~---~~-----~~---------~~~~~~~Gv~v~~gtD~~~~~~~~~~~---------------~~~~~~~~~~~~~ 355 (400)
+. . +. +| +.+++++|+.+++|||+.+++...+.+ .+++....+....
T Consensus 272 ~~~~~~~g~~~k~~pPlr~~~~~~~l~~~l~~G~i~~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~~~l~~~~~ 351 (459)
T PRK08323 272 DGPDWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRMPLLFSEGV 351 (459)
T ss_pred cCCccccccceEECCCCCChHHHHHHHHHhhcCCeeEEECCCCCCChHHhcccccCCHhhCCCCcchHhhhHHHHHHHHH
Confidence 33 1 21 33 668899999999999998764322221 3444444342211
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++++++|.|||++||+.++.|+|++|+.|
T Consensus 352 --------~~~~~~~~~~~~~~t~~pA~~lgl~~~~G~l~~G~~A 388 (459)
T PRK08323 352 --------MTGRITLNRFVELTSTNPAKIFGLYPRKGTIAVGADA 388 (459)
T ss_pred --------HcCCCCHHHHHHHHhhHHHHHhCCCCCCcccCCCCcC
Confidence 1234899999999999999999996667999999987
|
|
| >cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-31 Score=242.89 Aligned_cols=279 Identities=19% Similarity=0.192 Sum_probs=185.3
Q ss_pred cEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC
Q 015784 69 QIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ 148 (400)
Q Consensus 69 ~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~ 148 (400)
++||++|++|||||||+|+|+..... ....+ ...+++............++.+||||+++++..
T Consensus 2 ~vID~~g~~v~PGliD~H~Hl~~~~~-------~~~~~---------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g~~ 65 (342)
T cd01299 2 QVIDLGGKTLMPGLIDAHTHLGSDPG-------DLPLD---------LALPVEYRTIRATRQARAALRAGFTTVRDAGGA 65 (342)
T ss_pred cEEeCCCCEECCCeeeeeeeccccCC-------Ccccc---------ccCCHHHHHHHHHHHHHHHHhCCCcEEEeCCCc
Confidence 68999999999999999999855211 00000 011223333344456688999999999999854
Q ss_pred CHHHHHHHHHHcCCeEEEecccccCCCCCC-----cccc----------cCCchHHHHHHHHHHHHhccCCCCCeEEEee
Q 015784 149 HVSEMAKAVELLGLRACLVQSTMDCGEGLP-----ASWA----------VRTTDDCIQSQKELYAKHHHAADGRIRIWFG 213 (400)
Q Consensus 149 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-----~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (400)
.... .+.....+.. .++.++..|+.+. ..+. .........+..+.++++...+.+.+|++..
T Consensus 66 ~~~~-~~~~~~~g~~--~gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~~iK~~~~ 142 (342)
T cd01299 66 DYGL-LRDAIDAGLI--PGPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQLRRGADQIKIMAT 142 (342)
T ss_pred chHH-HHHHHHcCCc--cCCceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHHHhCCCEEEEecc
Confidence 3332 3334444331 1222222221110 0000 0011122334445555555566778888764
Q ss_pred ccc--------cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC
Q 015784 214 IRQ--------IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV 285 (400)
Q Consensus 214 ~~~--------~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~ 285 (400)
... ...++++.+..+++.|++.|+++.+|+.+... ++...+.+. ..++|+..+
T Consensus 143 g~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~---------------i~~~l~~G~----~~i~H~~~~ 203 (342)
T cd01299 143 GGVLSPGDPPPDTQFSEEELRAIVDEAHKAGLYVAAHAYGAEA---------------IRRAIRAGV----DTIEHGFLI 203 (342)
T ss_pred CCcCCCCCCCcccCcCHHHHHHHHHHHHHcCCEEEEEeCCHHH---------------HHHHHHcCC----CEEeecCCC
Confidence 221 12578899999999999999999999975432 222223332 358999999
Q ss_pred ChhHHHHHHhcCCeEEECcccccc---------------------c-cCcccHHHHHHcCCcEEEcCCCCC-CCCCCCHH
Q 015784 286 NHTEIGLLSRAGVKVSHCPASAMR---------------------M-LGFAPIKEMLHADICVSLGTDGAP-SNNRMSIV 342 (400)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~p~~~~~---------------------~-~~~~~~~~~~~~Gv~v~~gtD~~~-~~~~~~~~ 342 (400)
+++++++++++|+.++.||.++.. + .+..++++++++||++++|||++. ......++
T Consensus 204 ~~~~~~~l~~~g~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~GTD~~~~~~~~~~~~ 283 (342)
T cd01299 204 DDETIELMKEKGIFLVPTLATYEALAAEGAAPGLPADSAEKVALVLEAGRDALRRAHKAGVKIAFGTDAGFPVPPHGWNA 283 (342)
T ss_pred CHHHHHHHHHCCcEEeCcHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCCCchhHHH
Confidence 999999999999999999986532 1 234678999999999999999874 22344566
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 343 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.++..... .+++++++|+++|.|||+++|+++++|+|++||.|
T Consensus 284 ~e~~~~~~---------------~~~~~~~al~~~T~~~a~~~g~~~~~G~i~~G~~A 326 (342)
T cd01299 284 RELELLVK---------------AGGTPAEALRAATANAAELLGLSDELGVIEAGKLA 326 (342)
T ss_pred HHHHHHHH---------------hCCCHHHHHHHHHHHHHHHhCccCCcceECCCCcC
Confidence 66665432 24899999999999999999998889999999987
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. |
| >cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.6e-30 Score=243.88 Aligned_cols=171 Identities=21% Similarity=0.191 Sum_probs=130.6
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHH-HHhHhCCCCCCeeeEEecCCChhHHHHHHhc
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA 296 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~ 296 (400)
..++++.+.++++.|++.|+++++|+.++..... ..+ .++ .....+..+.+++++|+..+++++++++++.
T Consensus 290 ~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~i~~-~l~-------~~~~~~~~~g~~~~r~~i~H~~~~~~~~~~~l~~~ 361 (479)
T cd01300 290 LLISPEELEELVRAADEAGLQVAIHAIGDRAVDT-VLD-------ALEAALKDNPRADHRHRIEHAQLVSPDDIPRFAKL 361 (479)
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEEecHHHHHH-HHH-------HHHHHHHhcCCCCCCceeeecccCCHHHHHHHHHc
Confidence 4568899999999999999999999986543222 221 221 2233455567899999999999999999999
Q ss_pred CCeEEECcccccc---------c-----cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCC
Q 015784 297 GVKVSHCPASAMR---------M-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT 362 (400)
Q Consensus 297 ~~~~~~~p~~~~~---------~-----~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (400)
|+.+++||.+... + ....|++.++++|+++++|||++..+ .+++..+..+.......... ..
T Consensus 362 gv~~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p~~~~~~~Gv~v~lGSD~~~~~--~~p~~~~~~av~~~~~~~~~--~~ 437 (479)
T cd01300 362 GVIASVQPNHLYSDGDAAEDRRLGEERAKRSYPFRSLLDAGVPVALGSDAPVAP--PDPLLGIWAAVTRKTPGGGV--LG 437 (479)
T ss_pred CCceEeCcccccCchHHHHHhcccHHHHhcCchHHHHHHCCCeeeccCCCCCCC--CCHHHHHHHHheeeCCCCCC--CC
Confidence 9999999986531 1 34678999999999999999997542 67887777765432211000 00
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 363 TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 363 ~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
...+++|++++|+++|.|||+++|+++++|+|++||.|
T Consensus 438 ~~~~~ls~~~al~~~T~~~A~~lg~e~~~GsLe~Gk~A 475 (479)
T cd01300 438 NPEERLSLEEALRAYTIGAAYAIGEEDEKGSLEPGKLA 475 (479)
T ss_pred CccccCCHHHHHHHHHHHHHHHhccccccccccCCccc
Confidence 13467999999999999999999999989999999987
|
YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling. |
| >cd01305 archeal_chlorohydrolases Predicted chlorohydrolases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-30 Score=229.77 Aligned_cols=256 Identities=20% Similarity=0.276 Sum_probs=195.8
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhh---hhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC---CH
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWL---HDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HV 150 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~ 150 (400)
+|||||||+|.|+.++.+|+...+.++.+|+ .+..|+....+++++.+..++..+.++++.|+|++.|+... ..
T Consensus 1 ~v~PG~vn~H~H~~~~~~rg~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~ 80 (263)
T cd01305 1 ILIPALVNAHTHLGDSAIKEVGDGLPLDDLVAPPDGLKHRLLAQADDRELAEAMRKVLRDMRETGIGAFADFREGGVEGI 80 (263)
T ss_pred CccccceeccccHHHHHhhcCCCCCcHHHHhcCcccchHHHHHhCCHHHHHHHHHHHHHHHHhcCCeEEEEccCcchhHH
Confidence 5899999999999999999998888888866 33455666789999999999999999999999999997522 35
Q ss_pred HHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHH
Q 015784 151 SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 230 (400)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ 230 (400)
+...++.++.|+|. ...+.. +. . .... .+ +. . +...++++.....+ ++++++
T Consensus 81 ~a~~~a~~~~g~r~---~~~~~~----~~-~-----~~~~---~~-~~---~-----~~~~~~~~~~~~~~---l~~~~~ 132 (263)
T cd01305 81 ELLRRALGKLPVPF---EVILGR----PT-E-----PDDP---EI-LL---E-----VADGLGLSSANDVD---LEDILE 132 (263)
T ss_pred HHHHHHHHhcCCCc---eEEecc----CC-c-----chHH---HH-HH---h-----hcccccCCCCCccC---HHHHHH
Confidence 67788888999984 111111 10 0 0111 11 11 1 11124455555555 999999
Q ss_pred HHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc
Q 015784 231 MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM 310 (400)
Q Consensus 231 ~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~ 310 (400)
.|+++|+++++|+.+...+. +...++.+.+. +.+ ++.|+.++++++++++++.|+.+++||.+|+++
T Consensus 133 ~A~~~g~~v~~H~~e~~~~~---------g~~~i~~~~~~---~~~-~i~H~~~l~~~~~~~la~~g~~v~~~P~sn~~l 199 (263)
T cd01305 133 LLRRRGKLFAIHASETRESV---------GMTDIERALDL---EPD-LLVHGTHLTDEDLELVRENGVPVVLCPRSNLYF 199 (263)
T ss_pred HHHHCCCeeEEecCCCCCCC---------CchhHHHHHhC---CCC-EEEEcCCCCHHHHHHHHHcCCcEEEChhhHHHh
Confidence 99999999999999886532 12245555554 233 479999999999999999999999999999987
Q ss_pred -cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 015784 311 -LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (400)
Q Consensus 311 -~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~ 384 (400)
.+..|+++|+++|+++++|||+... ++.+++++|+.+....+.. ..++++++|+++|.|+|++
T Consensus 200 ~~g~~p~~~l~~~Gv~v~lGtD~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~aT~~gA~~ 263 (263)
T cd01305 200 GVGIPPVAELLKLGIKVLLGTDNVMV-NEPDMWAEMEFLAKYSRLQ----------GYLSPLEILRMATVNAAEF 263 (263)
T ss_pred CCCCCCHHHHHHCCCcEEEECCCCcc-CCCCHHHHHHHHHHHhccc----------ccCCHHHHHHHHhhccccC
Confidence 7889999999999999999998655 4678999999987665421 1479999999999999974
|
These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases. |
| >TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.5e-30 Score=232.88 Aligned_cols=310 Identities=20% Similarity=0.246 Sum_probs=198.1
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++. +.+.+|+|+||+|++|++..+.+..++ ...+++|++|++|+|||||.|+|+.... ..+
T Consensus 2 ~li~n~~v~~~~~----~~~~dvlI~~gkI~~Ig~~~~~~~~~~-~~~~i~d~~G~~v~PGlID~HvH~~~gg----~~~ 72 (389)
T TIGR01975 2 TLLKGAEVYAPEY----IGKKDILIANDKIIAIADEIPSTKDFV-PNCVVVGLEGMIAVPGFIDQHVHIIGGG----GEG 72 (389)
T ss_pred EEEECcEEEcCCc----CcceeEEEECCEEEEEcCCccccccCC-CCeEEECCCCCEEccCEeehhhcccccc----ccC
Confidence 5899999998642 356799999999999998765432122 1234566699999999999999997521 111
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-----CC---HHHHHHHHHHcCCeEEEeccccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QH---VSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-----~~---~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
.. ...+++ ..+.+++++|+||+.++.+ .+ .....++....|++.+.....+.
T Consensus 73 ~~-------------~~~~~e-------~~~~e~l~~GvTTv~d~~g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~ 132 (389)
T TIGR01975 73 GP-------------TTRTPE-------LTLSDITKGGVTTVVGLLGTDGITRHMESLLAKARALEEEGISCYMLTGAYH 132 (389)
T ss_pred CC-------------ccCCHH-------HHHHHHHhCCcEEEecCcccCccccChhhHHHHHHHHHHhCCEEEEEccccc
Confidence 00 011222 1356799999999999753 22 33678889999999988766554
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCe-EEEeeccccccCCHHHHHHHHHHHHHcC----Ce--eeEecCC
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI-RIWFGIRQIMNATDRLLLETRDMAREFK----TG--IHMHVAE 245 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~e~l~~~~~~a~~~~----~~--v~~H~~~ 245 (400)
. +......+.. ....+++... .+ ++.+.-|.....+.+.|..+.+.++..| ++ +++|..+
T Consensus 133 ~----p~~t~t~~~~----~d~~~~d~ii-----G~~~ia~sd~r~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~ 199 (389)
T TIGR01975 133 V----PSRTITGSVE----SDLLLIDKVI-----GVGEIAISDHRSAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGD 199 (389)
T ss_pred C----CCcccccchh----hheeeehhhc-----ccceEEEccCcCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 3 1111111111 1111122211 13 2556666677788889999999999998 89 9999998
Q ss_pred CchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC------hhHHHHHHhcCCeEEECccccccc--cCcc---
Q 015784 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN------HTEIGLLSRAGVKVSHCPASAMRM--LGFA--- 314 (400)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~------~~~i~~~~~~~~~~~~~p~~~~~~--~~~~--- 314 (400)
.+...+.+.+ .++..+++- .+-|..+++ ++.++.+++.+..-+..|.+...+ ....
T Consensus 200 ~~~~l~~l~~----------~~~~~di~~---~~f~pth~~r~~~l~~~~i~~~~~gg~iDv~~~~~~~~l~~~~~~~~~ 266 (389)
T TIGR01975 200 SKRALQPIYE----------LVENTDVPI---TQFLPTHINRNVPLFEAGLEFAKKGGTIDLTSSIDPQFRKEGEVAPAE 266 (389)
T ss_pred chhhHHHHHH----------HHHhcCCCh---hheecCccCCCHHHHHHHHHHHHhCCcEEEeCCCCccchhccccChHH
Confidence 7765554333 333333221 112222332 345666766666544444432222 2223
Q ss_pred cHHHHHHcCCc---EEEcCCCCCCCCCC---------------CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 015784 315 PIKEMLHADIC---VSLGTDGAPSNNRM---------------SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (400)
Q Consensus 315 ~~~~~~~~Gv~---v~~gtD~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~ 376 (400)
.+++++++|++ ++++||...+.+.+ +++.+++.+... .+++++|+|++
T Consensus 267 ~~~~~~~~Gv~~~~i~isSD~~gs~p~~~~~g~~~~~g~g~~~sl~~~~~~lv~~--------------g~ls~~eal~~ 332 (389)
T TIGR01975 267 GIKKALEAGVPLEKVTFSSDGNGSQPFFDENGELTGLGVGSFETLFEEVREAVKD--------------GDVPLEKALRV 332 (389)
T ss_pred HHHHHHHcCCCcceEEEEeCCCCCCCccccccccccCCcCcHHHHHHHHHHHHHh--------------CCCCHHHHHHH
Confidence 45889999997 49999975321212 235555544422 24899999999
Q ss_pred HhHHHHHHcCCCCCccccccCcCC
Q 015784 377 ATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 377 ~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+|.|||++||++ ++|+|++|+.|
T Consensus 333 ~T~npA~~Lgl~-~~G~I~~G~~A 355 (389)
T TIGR01975 333 ITSNVAGVLNLT-GKGEISPGNDA 355 (389)
T ss_pred HHHHHHHHhCCC-CCCeECCCCcC
Confidence 999999999998 57999999987
|
The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases. |
| >PRK06846 putative deaminase; Validated | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.8e-29 Score=230.89 Aligned_cols=341 Identities=14% Similarity=0.102 Sum_probs=213.1
Q ss_pred cEEEEecEEEeecCC------CceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccc
Q 015784 20 TMILHNAVIVTMDKE------SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (400)
Q Consensus 20 ~~li~n~~i~~~~~~------~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~ 93 (400)
.+.|+|+++..+... .+.....+|+|+||+|++|++.... +..+.++||++|++|+|||||+|+|+.+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~----~~~~~~~id~~g~~v~Pg~iD~H~H~~~~~ 80 (410)
T PRK06846 5 HYWLTNVRLETGFDYENGVIVQTETALCTLEIQDGKIVAIRPNKQV----PDATLPTYDANGLLMLPAFREMHIHLDKTY 80 (410)
T ss_pred ceEEEeeecCccccccCceecCCceeeEEEEEECCEEEEeecCCCC----CCCCCceEeCCCCEEecCEEeeeecccchh
Confidence 467888776543320 1123456999999999999985321 112358999999999999999999998755
Q ss_pred ccccc-CC---CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-------HHHHHHHHHHcCC
Q 015784 94 AKGIA-DD---VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-------VSEMAKAVELLGL 162 (400)
Q Consensus 94 ~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-------~~~~~~~~~~~g~ 162 (400)
.++.. .. ..+.+|+....++..... ......+...++.++..|+|+++++.... .+...+...+...
T Consensus 81 ~~~~~~~~~~~~g~~~~l~~~~~~~~~~~--~~~~~~a~~~l~~~~~~Gtt~~r~~v~~~~~~~~~~~~a~~e~l~e~~~ 158 (410)
T PRK06846 81 YGGPWKACRPAKTIQDRIELEQKELPELL--PTTQERAEKLIELLQSKGATHIRSHCNIDPVIGLKNLENLQAALERYKD 158 (410)
T ss_pred hccchhhcCCcccHHHHHhhhhhhHHHhH--HHHHHHHHHHHHHHHhCCccEEEEEEeeCcccccchHHHHHHHHHHhhC
Confidence 44321 11 234556543222111100 11112222455667788999987654211 1222233333222
Q ss_pred eEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEe
Q 015784 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 242 (400)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H 242 (400)
........+ +...... ....+.+++..+.+...++ .+.++.....+++.+.++++.|+++|+++++|
T Consensus 159 ~v~~~~~a~------~~~g~~~------~~~~~lL~~al~~Ga~~i~-gl~p~~~~~~~~~~l~~~~~lA~~~g~~v~~H 225 (410)
T PRK06846 159 GFTYEIVAF------PQHGLLR------SNSEPLMREAMKMGAHLVG-GVDPASVDGAIEKSLDTMFQIAVDFNKGVDIH 225 (410)
T ss_pred cceEEEEec------cCcccCC------ccHHHHHHHHHHcCCCEEe-CCCCccCCcCHHHHHHHHHHHHHHhCCCcEEE
Confidence 211111111 1111000 1112334444344333232 34455556777889999999999999999999
Q ss_pred cCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC---ChhHH----HHHHhcCCeEEECccccccccCccc
Q 015784 243 VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV---NHTEI----GLLSRAGVKVSHCPASAMRMLGFAP 315 (400)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~---~~~~i----~~~~~~~~~~~~~p~~~~~~~~~~~ 315 (400)
+.+...+.....+ ..++++.+.++.+ +..+.|+.++ +++++ +++++.|+.+++++. ...+.+|
T Consensus 226 v~e~~~~~~~~~~------~~~~~~~~~gl~~-~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~~~---~~~g~~p 295 (410)
T PRK06846 226 LHDTGPLGVATIK------YLVETTEEAQWKG-KVTISHAFALGDLNEEEVEELAERLAAQGISITSTVP---IGRLHMP 295 (410)
T ss_pred ECCCCChhHHHHH------HHHHHHHHhCCCC-CEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEeCC---CCCCCCC
Confidence 9987654332222 2578888888776 8999999874 56664 468999998876533 1267899
Q ss_pred HHHHHHcCCcEEEcCCCC----CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 015784 316 IKEMLHADICVSLGTDGA----PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (400)
Q Consensus 316 ~~~~~~~Gv~v~~gtD~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~ 391 (400)
+++|+++|+++++|||++ .++...|++.+++.+....+.. .. -...++++++|.+ |..+++++.+
T Consensus 296 ~~~l~~~Gv~v~lGtD~~~~~~~p~~~~d~~~~~~~~~~~~~~~--------~~--~~~~~~l~~~T~~-a~~l~~~~~~ 364 (410)
T PRK06846 296 IPLLHDKGVKVSLGTDSVIDHWSPFGTGDMLEKANLLAELYRWS--------DE--RSLSRSLALATGG-VLPLNDEGER 364 (410)
T ss_pred HHHHHhCCCeEEEecCCCCCCCcCCCCCCHHHHHHHHHHHhcCC--------CH--HHHHHHHHHHcCC-ccccccCCCc
Confidence 999999999999999976 2334678999998776554311 11 2456899999988 4568887778
Q ss_pred cccccCcCC
Q 015784 392 GSLEAGKKV 400 (400)
Q Consensus 392 G~i~~G~~A 400 (400)
|+|++||.|
T Consensus 365 G~l~~G~~A 373 (410)
T PRK06846 365 VWPKVGDEA 373 (410)
T ss_pred cCCCCCCcc
Confidence 999999987
|
|
| >PRK10657 isoaspartyl dipeptidase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=8.8e-29 Score=230.62 Aligned_cols=312 Identities=21% Similarity=0.258 Sum_probs=194.4
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
.++|+|++|++.+ ...+++|+|+||+|++|++..+.+. .....++||++|++|+|||||+|+|+.... ..
T Consensus 2 ~~~i~~~~v~~~~----~~~~~~i~i~~g~I~~v~~~~~~~~--~~~~~~~id~~g~~v~PG~id~H~H~~~~~----~~ 71 (388)
T PRK10657 2 FTLLKNAHVYAPE----DLGKKDILIAGGKIIAIADNINIPD--IVPDIEVIDASGKILVPGFIDQHVHIIGGG----GE 71 (388)
T ss_pred eEEEEccEEECCC----CCcceEEEEECCEEEEecCCccccc--cCCCCeEEECCCCEEcccceeeeeCcccCC----CC
Confidence 4789999999754 2356799999999999987543211 112468999999999999999999986311 00
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-----CCH---HHHHHHHHHcCCeEEEecccc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHV---SEMAKAVELLGLRACLVQSTM 171 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-----~~~---~~~~~~~~~~g~~~~~~~~~~ 171 (400)
. . | ...+++ ..+..++++|+||+.++.+ ... ....+.+...|++.+.....+
T Consensus 72 ~-~---~---------~~~t~~-------~~~~~~~~~GvTTvvd~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~~~~~ 131 (388)
T PRK10657 72 G-G---F---------STRTPE-------VQLSDLTEAGITTVVGLLGTDGITRSMESLLAKARALEEEGISAYMYTGSY 131 (388)
T ss_pred c-c---c---------ccCCHH-------HHHHHHHhCCceEEECCCCCCCCCCCHHHHHHHHHHHHhhCCEEEEEecCC
Confidence 0 0 0 011111 2446689999999999862 222 334555668899988554433
Q ss_pred cCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCC------eeeEecCC
Q 015784 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVAE 245 (400)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~------~v~~H~~~ 245 (400)
.. +..+. ...........+++... + +....++.....+++.+.++.+.++..+. ++++|+.+
T Consensus 132 ~~----~~~~~----~~~~~~~~~~~~~~~g~--g--~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~g~~~~i~vH~~~ 199 (388)
T PRK10657 132 HV----PVRTI----TGSIRKDIVLIDKVIGV--G--EIAISDHRSSQPTVEELARLAAEARVGGLLSGKAGIVHVHMGD 199 (388)
T ss_pred CC----Cchhh----hcchhhceehhhhhhCc--c--eeeeccCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 21 11000 01111111122222211 1 33445555566788888888888776554 89999886
Q ss_pred CchhhhHHhhhcCCCCChH-HHHhHhCCCCCCeeeEEecC---CChhHHHHHHhcCCeEEEC-ccccccc-c---CcccH
Q 015784 246 IPYENQVVMDTRKVDHGTV-TFLDKIEFLQNNLLSAHTVW---VNHTEIGLLSRAGVKVSHC-PASAMRM-L---GFAPI 316 (400)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~h~~~---~~~~~i~~~~~~~~~~~~~-p~~~~~~-~---~~~~~ 316 (400)
+....+ .+ +++...|+...+++..|+.+ ..++.++.+ +.|..+.+. +...++. . ...++
T Consensus 200 ~~~~l~-----------~v~~~l~~~Gv~~~~~~~~H~~~~~~~~~~~~~~~-~~G~~~~v~~~~~~~~~~~~~~~~~~l 267 (388)
T PRK10657 200 GKKGLQ-----------PLFELLENTDIPISQFLPTHVNRNEPLFEQALEFA-KKGGVIDLTTSDPDFLGEGEVAPAEAL 267 (388)
T ss_pred chHHHH-----------HHHHHHHhcCCCcceeeCcccCCCHHHHHHHHHHH-HcCCeEEEecCCCcccccCccCHHHHH
Confidence 543222 33 45567787766666677776 333444444 456554222 2222222 2 23567
Q ss_pred HHHHHcCC---cEEEcCCCCCCCCCC---------------CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 015784 317 KEMLHADI---CVSLGTDGAPSNNRM---------------SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378 (400)
Q Consensus 317 ~~~~~~Gv---~v~~gtD~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T 378 (400)
.+++++|+ +++++||+...++.+ .++..++.+.. ..+++++++++++|
T Consensus 268 ~~~~~~G~~~d~v~l~tD~~~~~~~~~~~g~~~~~g~~~~~~l~~~~~~~~~--------------~~gis~~~~l~~aT 333 (388)
T PRK10657 268 KRALEAGVPLSRVTLSSDGNGSLPKFDEDGNLVGLGVGSVESLLEEVRELVK--------------DEGLPLEDALKPLT 333 (388)
T ss_pred HHHHHcCCChhheEEECCCCCCCceeccCCCEeccCcCchhhHHHHHHHHHH--------------hcCCCHHHHHHHHH
Confidence 89999998 789999974322111 14444443321 23599999999999
Q ss_pred HHHHHHcCCCCCccccccCcCC
Q 015784 379 INGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 379 ~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.|||+++|+++ +|+|++|+.|
T Consensus 334 ~npA~~lg~~~-~G~l~~G~~A 354 (388)
T PRK10657 334 SNVARFLKLNG-KGEILPGKDA 354 (388)
T ss_pred HHHHHHhCCCC-CCccCCCCcc
Confidence 99999999987 7999999987
|
|
| >PRK15446 phosphonate metabolism protein PhnM; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.2e-28 Score=221.60 Aligned_cols=303 Identities=20% Similarity=0.211 Sum_probs=178.3
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|++.++ .. +++|+|+||+|++|++... ...++||++|++|||||||+|+|...
T Consensus 2 ~~~~i~~~~v~~~~~---~~-~~~i~i~~g~I~~i~~~~~-------~~~~~iDa~g~~v~PG~ID~H~h~~~------- 63 (383)
T PRK15446 2 MEMILSNARLVLPDE---VV-DGSLLIEDGRIAAIDPGAS-------ALPGAIDAEGDYLLPGLVDLHTDNLE------- 63 (383)
T ss_pred ccEEEECcEEEcCCC---ce-eeeEEEECCEEEEecCCCC-------CCCceEeCCCCEEEeCeEEcccCCcc-------
Confidence 578999999997542 33 6899999999999997432 13478999999999999999996542
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cC--C-----HH----HHHHHHHHcCCeEEE
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ--H-----VS----EMAKAVELLGLRACL 166 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~--~-----~~----~~~~~~~~~g~~~~~ 166 (400)
..+..|... .|+. .+++.. ...+++++|+||+.++. .. . .. .+.+.......+
T Consensus 64 --~~~~p~~~~-~~~~-----~~~~~~----~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 128 (383)
T PRK15446 64 --KHLAPRPGV-DWPA-----DAALAA----HDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARAR--- 128 (383)
T ss_pred --cccCCCCCC-ccch-----HHHHHH----HHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhc---
Confidence 111111110 0111 122222 22678999999999962 11 1 11 111111100000
Q ss_pred ecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeec--------------------------------
Q 015784 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI-------------------------------- 214 (400)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------- 214 (400)
...+.+.+....... .....+.+..+ +...+...++.++..
T Consensus 129 ~~~~vD~~~h~~~~~---~~~~~~~~l~~----~~~~g~~~~k~fm~~~p~~~~~~~~~~~~~~~~~~~g~~~~e~~~~~ 201 (383)
T PRK15446 129 GLLRADHRLHLRCEL---TNPDALELFEA----LLAHPRVDLVSLMDHTPGQRQFRDLEKYREYYAGKYGLSDEEFDAFV 201 (383)
T ss_pred CchhccceeEEEEEe---cCcchHHHHHH----HhcCCCcCEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHH
Confidence 111111111000000 00000111111 111111111111110
Q ss_pred ----cccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHH
Q 015784 215 ----RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEI 290 (400)
Q Consensus 215 ----~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i 290 (400)
......+.+.++.+++.|+++|+++.+|+.+.... ++.....|+. +++| ..+.+.+
T Consensus 202 ~~~~~~~~~~~~e~i~~~v~~A~~~g~~v~sH~~~~~~~--------------i~~a~~~Gv~----~~e~--~~~~e~~ 261 (383)
T PRK15446 202 EERIALSARYAPPNRRAIAALARARGIPLASHDDDTPEH--------------VAEAHALGVA----IAEF--PTTLEAA 261 (383)
T ss_pred HHHHHhHhhcCHHHHHHHHHHHHHCCCceeecCCCCHHH--------------HHHHHHcCCc----eeeC--CCcHHHH
Confidence 00123567889999999999999999999765543 2223333432 1233 3457778
Q ss_pred HHHHhcCCeEEECccccccc---cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCC
Q 015784 291 GLLSRAGVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAA 367 (400)
Q Consensus 291 ~~~~~~~~~~~~~p~~~~~~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (400)
+.+++.|+.++.++...++. .+..++++++++|+++++|||+.+. +++..+.... ...+
T Consensus 262 ~~~~~~g~~v~~~~p~~~r~~~~~~~~~~~~~~~~Gv~~~lgSD~~p~----~~~~~~~~~~--------------~~~g 323 (383)
T PRK15446 262 RAARALGMSVLMGAPNVVRGGSHSGNVSALDLAAAGLLDILSSDYYPA----SLLDAAFRLA--------------DDGG 323 (383)
T ss_pred HHHHHCCCEEEeCCcccccCCcccchHhHHHHHHCCCcEEEEcCCChh----hHHHHHHHHH--------------HhcC
Confidence 88888899888775533332 3456788999999999999998643 2443322211 1235
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 368 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 368 l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++++++|+++|.|||+++|++++ |+|++|+.|
T Consensus 324 ls~~~al~~~T~npA~~lgl~~~-G~I~~G~~A 355 (383)
T PRK15446 324 LDLPQAVALVTANPARAAGLDDR-GEIAPGKRA 355 (383)
T ss_pred CCHHHHHHHHhHHHHHHcCCCCC-cCcCCCCcC
Confidence 99999999999999999999876 999999987
|
|
| >PRK09357 pyrC dihydroorotase; Validated | Back alignment and domain information |
|---|
Probab=99.96 E-value=8.1e-28 Score=226.31 Aligned_cols=317 Identities=19% Similarity=0.208 Sum_probs=192.6
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|++++ ..+.+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+...
T Consensus 2 ~~~i~~~~v~~~~---~~~~~~~I~I~dg~I~~i~~~~~------~~~~~~iD~~g~~v~PG~ID~H~H~~~~------- 65 (423)
T PRK09357 2 MILIKNGRVIDPK---GLDEVADVLIDDGKIAAIGENIE------AEGAEVIDATGLVVAPGLVDLHVHLREP------- 65 (423)
T ss_pred cEEEEeEEEECCC---CCcceeeEEEECCEEEEeeCCCC------CCCCeEEECCCCEEeCCEEecccccCCC-------
Confidence 4899999999753 24577899999999999986421 1246899999999999999999998431
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------CHHHHHHHHHHcCCeEEEecccc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTM 171 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~ 171 (400)
.....++....+ +.++++|||++.++... ..+...+.++..+++.+.....+
T Consensus 66 ----------------~~~~~e~~~~~~----~~a~~~GvTt~~d~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (423)
T PRK09357 66 ----------------GQEDKETIETGS----RAAAAGGFTTVVAMPNTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAI 125 (423)
T ss_pred ----------------CccccccHHHHH----HHHHhCCCeEEEecCCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEE
Confidence 011223333332 45789999999998632 23344555555565544443333
Q ss_pred cCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh
Q 015784 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (400)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (400)
..+ .. ...+.+...+.+ . + +.. +.++..+..+++.+.++++.++++|+++++|+.+......
T Consensus 126 ~~~--~~--------~~~~~~~~~l~~----~--g-v~~-~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~ 187 (423)
T PRK09357 126 TKG--LA--------GEELTEFGALKE----A--G-VVA-FSDDGIPVQDARLMRRALEYAKALDLLIAQHCEDPSLTEG 187 (423)
T ss_pred EeC--CC--------CccHHHHHHHHh----C--C-cEE-EECCCcccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhc
Confidence 221 01 011222222221 1 2 222 3455556678889999999999999999999987644221
Q ss_pred HH------hhhcCC-CCCh------H-HHHhHhCCCCCCeeeEEecCCChhH-HHHHHhcCCe--EEECcccc-------
Q 015784 252 VV------MDTRKV-DHGT------V-TFLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAGVK--VSHCPASA------- 307 (400)
Q Consensus 252 ~~------~~~~~~-~~~~------~-~~l~~~~~~~~~~~~~h~~~~~~~~-i~~~~~~~~~--~~~~p~~~------- 307 (400)
.+ ...++. .+.. + +.+......+.+..+.|......-+ ++.+++.|+. +.+||.+.
T Consensus 188 ~~~~~g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~g~~~hi~H~s~~~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~ 267 (423)
T PRK09357 188 GVMNEGEVSARLGLPGIPAVAEEVMIARDVLLAEATGARVHICHVSTAGSVELIRWAKALGIKVTAEVTPHHLLLTDEDL 267 (423)
T ss_pred ccccCChhhHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEechHHheEcHHHH
Confidence 11 011111 0001 1 1112222334566677776644333 4555555644 55888431
Q ss_pred ------cc------c-cCcccHHHHHHcCCcEEEcCCCCCCCCCC---CHH--------HHHHHHHHHhcccccccCCCC
Q 015784 308 ------MR------M-LGFAPIKEMLHADICVSLGTDGAPSNNRM---SIV--------DEMYLASLINKGREVFANGTT 363 (400)
Q Consensus 308 ------~~------~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~ 363 (400)
.+ . .+..++.+++++|+.+++|||+.+.+... +++ -+......+... .
T Consensus 268 ~~~~~~~k~~Pplr~~~~~~~l~~~l~~G~~~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~~--------~ 339 (423)
T PRK09357 268 LTYDPNYKVNPPLRTEEDREALIEGLKDGTIDAIATDHAPHAREEKECEFEAAPFGITGLETALSLLYTTL--------V 339 (423)
T ss_pred hCcCCceEECCCCCCHHHHHHHHHHHHcCCCeEEecCCCCCChHHccCCHhhCCCCceEHHHHHHHHHHHH--------H
Confidence 11 1 23457788899999999999998763221 111 112222222111 1
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 364 ~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++++++|.|||+++|+.+ |+|++|++|
T Consensus 340 ~~~~~~~~~~~~~~t~~~A~~~g~~~--G~i~~G~~A 374 (423)
T PRK09357 340 KTGLLDLEQLLEKMTINPARILGLPA--GPLAEGEPA 374 (423)
T ss_pred HcCCCCHHHHHHHHhHHHHHHhCCCC--CccCCCCcC
Confidence 23459999999999999999999975 999999987
|
|
| >cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.6e-27 Score=221.49 Aligned_cols=313 Identities=17% Similarity=0.159 Sum_probs=186.9
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++.+. ....++|.|+||+|++|++... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 d~~i~n~~v~~~~~~--~~~~~~i~I~~g~I~~i~~~~~------~~~~~~iD~~G~~v~PG~iD~H~H~~~~~------ 66 (415)
T cd01297 1 DLVIRNGTVVDGTGA--PPFTADVGIRDGRIAAIGPILS------TSAREVIDAAGLVVAPGFIDVHTHYDGQV------ 66 (415)
T ss_pred CEEEECCEEECCCCC--ccccceEEEECCEEEEEecCCC------CCCCeEEECCCCEEccCEeeeeecCCccc------
Confidence 478999999986432 3356799999999999986432 12468999999999999999999996411
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-------------------------------
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ------------------------------- 148 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~------------------------------- 148 (400)
+. +. ..+.++.+|+||+.++...
T Consensus 67 ------------------~~-~~-------~~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (415)
T cd01297 67 ------------------FW-DP-------DLRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWG 120 (415)
T ss_pred ------------------cc-Cc-------chhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCC
Confidence 00 00 1134778899999985321
Q ss_pred --CHHHHHHHHHHcC--CeEEE--ecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeecccc--ccC
Q 015784 149 --HVSEMAKAVELLG--LRACL--VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI--MNA 220 (400)
Q Consensus 149 --~~~~~~~~~~~~g--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 220 (400)
......+.+...+ +.... ....+.... .... ........+.+..+++++....+ .+.+....... ...
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~~~-~g~~-~~~~~~~~~~~~~~l~~~al~~G--a~g~~~~~~y~~~~~~ 196 (415)
T cd01297 121 WATFAEYLDALEARPPAVNVAALVGHAALRRAV-MGLD-AREATEEELAKMRELLREALEAG--ALGISTGLAYAPRLYA 196 (415)
T ss_pred CCCHHHHHHHHHhcCCCcCeeeccCcHHHHHHH-hCcC-CCCCCHHHHHHHHHHHHHHHHCC--CeEEEcccccCCcccC
Confidence 1111222221211 11110 000000000 0000 01112334555555555544432 22222222222 256
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCch-hhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh----------hH
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPY-ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH----------TE 289 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~----------~~ 289 (400)
+++.+.++++.++++|.++.+|+.+... +... .-+.+......+.+..+.|+..... +.
T Consensus 197 ~~~~l~~~~~~a~~~g~~v~~H~e~~~~~e~~a----------v~~~~~~a~~~g~r~~i~H~ss~~~~~~~~~~~~l~~ 266 (415)
T cd01297 197 GTAELVALARVAARYGGVYQTHVRYEGDSILEA----------LDELLRLGRETGRPVHISHLKSAGAPNWGKIDRLLAL 266 (415)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEECcccccHHHH----------HHHHHHHHHHhCCCEEEEEEecCCCcccchHHHHHHH
Confidence 8889999999999999999999976532 2221 1123333344466888999998765 56
Q ss_pred HHHHHhcCCeE--EECccccccccCcccHHHHHHcCCcEEEcCCCCCCCC-CCCHHHHHHHHHHHhcccccccCCCCCCC
Q 015784 290 IGLLSRAGVKV--SHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNN-RMSIVDEMYLASLINKGREVFANGTTDPA 366 (400)
Q Consensus 290 i~~~~~~~~~~--~~~p~~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (400)
++++++.|+.+ .+||.... ...+++++++. ..++++||+.+.+. ....+..+. ..+.... ....
T Consensus 267 i~~a~~~G~~v~~e~~p~~~~---~~~~~~~l~~~-~~~~i~SDh~~~~~~~~~~~~~~~--~~l~~~~-------~~~~ 333 (415)
T cd01297 267 IEAARAEGLQVTADVYPYGAG---SEDDVRRIMAH-PVVMGGSDGGALGKPHPRSYGDFT--RVLGHYV-------RERK 333 (415)
T ss_pred HHHHHHhCCcEEEEeCCCCCC---cHHHHHHHHcC-CCceeeeCCCcCCCCCcchhCCHH--HHHHHHh-------cccC
Confidence 67777766554 46774321 15677888887 99999999986420 011111111 1111000 0122
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 367 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 367 ~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.++++++++++|.|||++||+.+ +|+|++|+.|
T Consensus 334 ~~~~~~~~~~~t~~pA~~~gl~~-~G~l~~G~~A 366 (415)
T cd01297 334 LLSLEEAVRKMTGLPARVFGLAD-RGRIAPGYRA 366 (415)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCC-CceeCCCCCC
Confidence 38999999999999999999974 5999999987
|
|
| >TIGR01792 urease_alph urease, alpha subunit | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-27 Score=221.52 Aligned_cols=307 Identities=17% Similarity=0.164 Sum_probs=181.2
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh--hhh---ccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--QQF---SQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~--~~~---~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
+.++++|+|++|++.. . +.+++|+|+||+|++|++..+.. ..+ ...++++||++|++|+|||||+|+|+..
T Consensus 64 ~~MDlVIkNg~VID~~---g-i~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~ 139 (567)
T TIGR01792 64 GVLDLVITNALILDWT---G-IYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYIS 139 (567)
T ss_pred ccCcEEEECeEEECCC---C-eEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCC
Confidence 4568999999999732 2 46789999999999999753210 100 0124689999999999999999999833
Q ss_pred cccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC---------------CHHHHHHH
Q 015784 92 QLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---------------HVSEMAKA 156 (400)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---------------~~~~~~~~ 156 (400)
.. ..+.++..|+|++.+.+.. ....+.+.
T Consensus 140 ------------------------P~------------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~a 183 (567)
T TIGR01792 140 ------------------------PQ------------QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQA 183 (567)
T ss_pred ------------------------cc------------HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHH
Confidence 10 0255889999999995421 11223444
Q ss_pred HHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcC
Q 015784 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (400)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~ 236 (400)
+...+++..+. ..+ .........+.+ .. +. ..+.++..+..+++.+.++++.|+++|
T Consensus 184 a~~~~in~g~~----g~g-----------~~~~~~~L~e~i----~a--Ga--~gfK~h~~y~~s~e~L~~al~~A~e~g 240 (567)
T TIGR01792 184 ADGLPINFGFT----GKG-----------SGSGPAALIEQI----EA--GA--CGLKVHEDWGATPAAIDNALSVADEYD 240 (567)
T ss_pred hccCCccEEEE----eCC-----------ccchHHHHHHHH----Hc--CC--cEEEeCCCCCCCHHHHHHHHHHHHHcC
Confidence 44555543221 011 001112222221 11 22 235567777899999999999999999
Q ss_pred CeeeEecCCCchh---hhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeE-EECcc-------
Q 015784 237 TGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV-SHCPA------- 305 (400)
Q Consensus 237 ~~v~~H~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~-~~~p~------- 305 (400)
+++++|+ ++..+ ++...+.++. ++++++...|.-+. + .++-++.....++.. +..|.
T Consensus 241 v~V~iH~-ET~~E~g~ve~t~~a~g~--rpIh~~H~~G~g~g--------h-apdi~~~~~~~~~~~~st~pt~p~~~~~ 308 (567)
T TIGR01792 241 VQVAVHT-DTLNESGFVEDTIAAFKG--RTIHTYHTEGAGGG--------H-APDIIVVVGYNNILPSSTNPTLPYTVNT 308 (567)
T ss_pred CEEEEeC-CCcccchHHHHHHHHHCC--CcchhHhhcCCCCC--------c-HHHHHHHcCCCCcccCCCCCCCCCccCc
Confidence 9999999 88877 6656655543 35665555543211 0 111122221122211 11111
Q ss_pred --------------------------ccccccCcccHHHHHHcCCcEEEcCCCCCCCCCCC-HHHHHHHHHHHhcccccc
Q 015784 306 --------------------------SAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS-IVDEMYLASLINKGREVF 358 (400)
Q Consensus 306 --------------------------~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 358 (400)
|-.|.+.++.-..|.+.|+...++||+.+.+.... ..+..+.+..+.+.+..+
T Consensus 309 ~~e~~~m~~~~h~l~~~~~~d~~~a~~r~r~~t~~ae~~l~d~G~~~~~~sDs~~mgr~~~~~~r~~q~a~k~~~~~g~~ 388 (567)
T TIGR01792 309 IDEHLDMLMVCHHLNPKIPEDVAFAESRIRKETIAAEDVLQDMGAISMISSDSQAMGRIGEVVTRCWQTADKMKKQRGPL 388 (567)
T ss_pred hhhhcCeEEEeccCCCCCcccchhhhhhccceeccccchhhhCCcEEEecCCchhhCcccceeechHHHHHHHHHhcCCC
Confidence 01112334445668999999999999964322111 112222222222211111
Q ss_pred -cCC-CCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 359 -ANG-TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 359 -~~~-~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+. ..+.+.++.+ |+++|.|||+++|+++++|+|++||.|
T Consensus 389 ~~~~~~~~~~rl~r~--L~~yT~n~A~a~g~~~~~GsLe~Gk~A 430 (567)
T TIGR01792 389 PGDSPGNDNNRVKRY--VAKYTINPAITHGISDYIGSIEVGKLA 430 (567)
T ss_pred cccccCChhhhHHHH--HHHHhHHHHHHcCcccCceeeCCCCcc
Confidence 111 0112333343 999999999999999999999999987
|
This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor. |
| >PRK13309 ureC urease subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.9e-27 Score=221.14 Aligned_cols=322 Identities=18% Similarity=0.172 Sum_probs=184.2
Q ss_pred CCCCCCCCCC-CC-cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh--h-----hhccCCCcEEeCCCc
Q 015784 6 SGGGSSSGSL-GS-SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q-----QFSQMADQIIDLQSQ 76 (400)
Q Consensus 6 ~~~~~~~~~~-~~-~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~--~-----~~~~~~~~viD~~g~ 76 (400)
.|++.++... .. ..+++|+|++|+++.. . +.+++|.|+||+|++|++..... . .....++++||++|+
T Consensus 53 ~~~~~~~~~~~~~~~~DlVI~Ng~ViD~~~--g-i~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~ 129 (572)
T PRK13309 53 DGMGANNNLTRDNGVLDLVITNVTIVDARL--G-VIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHL 129 (572)
T ss_pred cCCCCCCCCCCCcCcCCEEEECeEEEcCCC--C-EEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCC
Confidence 4445544222 22 5689999999997432 2 35789999999999999743210 0 001124689999999
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---------
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------- 147 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------- 147 (400)
+|+|||||+|+|+.. ..+ . +.++.+||||+..++.
T Consensus 130 iVtPG~ID~HvH~~~------------------------P~~------~------~aAl~gGVTTvi~~G~gp~~~~n~~ 173 (572)
T PRK13309 130 ILTAAGIDTHIHLIS------------------------PQQ------A------YHALSNGVTTFFGGGIGPTDGTNGT 173 (572)
T ss_pred EEEeCEEEeecccCC------------------------cch------H------HHHHcCceEEEEecCCCCccCCCCC
Confidence 999999999999743 110 0 3489999999996421
Q ss_pred ---C---CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCC
Q 015784 148 ---Q---HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT 221 (400)
Q Consensus 148 ---~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
. .+..+.+.++...+...... .+ ......+..+.+ .. +.+. +..+..+..+
T Consensus 174 ~~t~g~~~i~~~l~~a~~~pvn~g~~g----kg-----------~~~~~~~l~el~----~a--Ga~g--fk~~~d~g~t 230 (572)
T PRK13309 174 TVTPGPWNIRQMLRSIEGLPVNVGILG----KG-----------NSYGRGPLLEQA----IA--GVAG--YKVHEDWGAT 230 (572)
T ss_pred CCCCCHHHHHHHHHHhccCCcCEEEEc----CC-----------CCCCHHHHHHHH----hc--CcEE--EEecCcCCcC
Confidence 1 12334444444333321110 01 001112222221 11 2222 2222333458
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCc--hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCe
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIP--YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~ 299 (400)
++.+.++++.|+++++++.+|+..-. ...+...+.++. ++++++...+..+. + .++-++.....++.
T Consensus 231 ~~~L~~aLe~A~~~gv~VaiH~d~lnE~g~vE~~~aa~~g--rpih~~H~~Gaggg--------h-apd~~~~~~~~~~~ 299 (572)
T PRK13309 231 AAALRHALRVADEVDIQVAVHTDSLNECGYVEDTIDAFEG--RTIHTFHTEGAGGG--------H-APDIIKVASQTNVL 299 (572)
T ss_pred HHHHHHHHHHHHhcCCEEEEeCCccccchhHHHHHHHhCC--CceeeeeccCcccC--------C-chhHHHhcCCCCcc
Confidence 88999999999999999999965332 223332222221 12222211111110 0 01111111111221
Q ss_pred -EEECcc---------------------------------ccccccCcccHHHHHHcCCcEEEcCCCCCCC-CCCCHHHH
Q 015784 300 -VSHCPA---------------------------------SAMRMLGFAPIKEMLHADICVSLGTDGAPSN-NRMSIVDE 344 (400)
Q Consensus 300 -~~~~p~---------------------------------~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~-~~~~~~~~ 344 (400)
.+..|. +-++....++.+.|++.|+.+++|||++... .+.++++.
T Consensus 300 ~~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~D~~~a~srig~e~~~a~~~l~daGa~~~~gSD~pv~gr~~~~p~~~ 379 (572)
T PRK13309 300 PSSTNPTLPYGVNSQAELFDMIMVCHNLNPNVPADVAFAESRVRPETIAAENVLHDMGVISMFSSDSQAMGRVGENWLRA 379 (572)
T ss_pred cCCCCCCCCCcccchHhhhchhhhhccCCCCCCCChhHHHHhhCchhhcchhHHHhCCCEEEEcCCCCcccCCcccHHHH
Confidence 111111 0011144578899999999999999998531 24678887
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 345 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++.+......+..........+.+++.++|+++|.|||+++|+++++|+|++||.|
T Consensus 380 iq~Av~rk~~~g~l~~~~~~~~~~~v~~aL~~yT~n~A~a~g~e~~~GsLe~Gk~A 435 (572)
T PRK13309 380 IQTADAMKAARGKLPEDAAGNDNFRVLRYVAKITINPAITQGVSHVIGSVEVGKMA 435 (572)
T ss_pred HHHHHHHHhccCCCCccCCCcccccHHHHHHHHhHHHHHHcCcccCccccCCCCcC
Confidence 87777554222111111111345899999999999999999999999999999987
|
|
| >PRK13207 ureC urease subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-26 Score=214.42 Aligned_cols=314 Identities=19% Similarity=0.194 Sum_probs=185.0
Q ss_pred CCCCCCCCC-CCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh--h---hhccCCCcEEeCCCcEee
Q 015784 6 SGGGSSSGS-LGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q---QFSQMADQIIDLQSQILL 79 (400)
Q Consensus 6 ~~~~~~~~~-~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~--~---~~~~~~~~viD~~g~~v~ 79 (400)
.|++.++.. ..+.++++|+|++|++.. . +.+++|+|+||+|++|++..... . .....+.++||++|++|+
T Consensus 53 ~~~~~~~~~~~~~~mDlVI~Na~Vvd~~---g-i~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~ 128 (568)
T PRK13207 53 DGMGQSQRARADGAVDTVITNALILDHW---G-IVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVT 128 (568)
T ss_pred cccCcCCCCCccccCCEEEECeEEECCC---C-eEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEE
Confidence 455555544 334678999999999742 2 35689999999999999742110 0 001135689999999999
Q ss_pred ecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC----------
Q 015784 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---------- 149 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---------- 149 (400)
|||||+|+|+.. .. . .+.++.+||||+.+++...
T Consensus 129 PG~ID~HvH~~~------------------------P~-----~-------~~aALagGVTTVi~mg~gP~~gt~~~t~t 172 (568)
T PRK13207 129 AGGIDTHIHFIC------------------------PQ-----Q-------IEEALASGVTTMIGGGTGPATGTNATTCT 172 (568)
T ss_pred eCeEECccCCcc------------------------cc-----H-------HHHHHcCCCCEEEcCCcCCccCCcccccc
Confidence 999999999843 10 0 1458899999999973211
Q ss_pred -----HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHH
Q 015784 150 -----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRL 224 (400)
Q Consensus 150 -----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 224 (400)
...+.+.+....+..... ..+ .........+ ....+...+++. ..+..+++.
T Consensus 173 pG~~~l~~~l~~a~~~pin~g~~----g~g-----------~~~~~~~L~e----~i~aGA~gfKi~----~d~g~t~~~ 229 (568)
T PRK13207 173 PGPWHIHRMLQAADAFPMNIGFL----GKG-----------NASLPEALEE----QIEAGAIGLKLH----EDWGATPAA 229 (568)
T ss_pred cchHHHHHHHHHhhcCCceEEEE----cCC-----------CcccHHHHHH----HHHcCCCEEeec----CCCCCCHHH
Confidence 112222222211111100 000 1111222222 222222233432 223457889
Q ss_pred HHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecC-------CChhHHHHHHhcC
Q 015784 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW-------VNHTEIGLLSRAG 297 (400)
Q Consensus 225 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~-------~~~~~i~~~~~~~ 297 (400)
+..+++.|+++|+++.+|+...... +.++.-... ..+ ...|..| ..++-++.+...|
T Consensus 230 l~~aL~~A~~~gv~V~iHa~tlne~------------G~~e~t~~a-~~g---~~iH~~H~egaggghapdii~~~~~~~ 293 (568)
T PRK13207 230 IDNCLSVADEYDVQVAIHTDTLNES------------GFVEDTIAA-FKG---RTIHTFHTEGAGGGHAPDIIKVAGEPN 293 (568)
T ss_pred HHHHHHHHHHhCCEEEEeCCCcccc------------hHHHHHHHh-cCC---CEEEEEeecCCCcCCchHHHHHhhcCC
Confidence 9999999999999999999643321 012211111 111 1234444 2466677777777
Q ss_pred CeEE-ECccc----cc-----------------------------cccCcccHHHHHHcCCcEEEcCCCCCCC-CCCCHH
Q 015784 298 VKVS-HCPAS----AM-----------------------------RMLGFAPIKEMLHADICVSLGTDGAPSN-NRMSIV 342 (400)
Q Consensus 298 ~~~~-~~p~~----~~-----------------------------~~~~~~~~~~~~~~Gv~v~~gtD~~~~~-~~~~~~ 342 (400)
+..+ ..|.- |. |.+.++.-..+++.|+.++++||++... -+.+++
T Consensus 294 v~p~st~pt~p~~~~~~~e~~~m~m~~h~l~~~~~~d~~~a~srir~~t~~ae~~l~d~Ga~~~~~SD~p~~~~~~~~~~ 373 (568)
T PRK13207 294 VLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPSIPEDVAFAESRIRRETIAAEDILHDLGAISMISSDSQAMGRVGEVII 373 (568)
T ss_pred CccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccceeecccchhhhCCCEEEecCCcccccccccchh
Confidence 6633 33321 00 1122233355899999999999998652 235677
Q ss_pred HHHHHHHHHhcccccc--cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 343 DEMYLASLINKGREVF--ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 343 ~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.++.+.......... ..+..+.+.+++. |+++|.|||+++|+++++|+|++||.|
T Consensus 374 r~~q~A~~r~~~~G~~~~d~~~~~n~ri~~~--l~~~T~npA~alG~~~~vGsIe~Gk~A 431 (568)
T PRK13207 374 RTWQTAHKMKVQRGPLPGDSGRNDNFRVKRY--IAKYTINPAIAHGISHEVGSVEVGKLA 431 (568)
T ss_pred HHHHHHHHHHHccCCCCcccccCccchHHHH--HHHHhHHHHHHcCCCcCccccCCCCcC
Confidence 7777777665322111 0111122233333 999999999999999989999999987
|
|
| >PRK13206 ureC urease subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-26 Score=211.69 Aligned_cols=318 Identities=18% Similarity=0.182 Sum_probs=179.4
Q ss_pred CCCCCCCCCC-CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChh--hhh-----hhccCCCcEEeCCCcE
Q 015784 6 SGGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSAD--ILQ-----QFSQMADQIIDLQSQI 77 (400)
Q Consensus 6 ~~~~~~~~~~-~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~--~~~-----~~~~~~~~viD~~g~~ 77 (400)
.|++.++... ....+++|+|++|++..+ +.+.+|.|+||+|++|++... ... .+....+++||++|++
T Consensus 57 ~g~~~~~~~~~~~~~DlVI~Na~IiD~~g----i~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~i 132 (573)
T PRK13206 57 ESMGQGRATRAEGAPDTVITGAVILDHWG----IVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRI 132 (573)
T ss_pred cccCccCCCCCCCCCCEEEECeEEECCCC----eEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCE
Confidence 4445444332 245689999999997432 245799999999999997531 100 0111346899999999
Q ss_pred eeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC--------
Q 015784 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-------- 149 (400)
Q Consensus 78 v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-------- 149 (400)
|+|||||+|+|+.. +. . .+.++.+||||+.+++...
T Consensus 133 V~PG~ID~HVH~~~------------------------Pg-----~-------~~aALagGVTTvi~~G~gP~~~t~~~t 176 (573)
T PRK13206 133 LTAGAIDCHVHFIC------------------------PQ-----I-------VDEALAAGITTLIGGGTGPAEGSKATT 176 (573)
T ss_pred EEeCEEeeeeccCC------------------------ch-----H-------HHHHHcCCeEEEEcCCCCccccCcccc
Confidence 99999999999843 10 0 1458999999999863211
Q ss_pred -------HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCH
Q 015784 150 -------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222 (400)
Q Consensus 150 -------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
...+.+.+....+...... .+ ....... +......+...++. +..+..++
T Consensus 177 ~t~g~~~l~~~~~aa~~~pvn~g~~g----~g-----------~~~~~~~----L~el~~aGA~GfKi----~~d~g~t~ 233 (573)
T PRK13206 177 VTPGAWHLARMLEALDGWPVNVALLG----KG-----------NTVSAEA----LWEQLRGGAGGFKL----HEDWGSTP 233 (573)
T ss_pred cccchhHHHHHHHHhhcCceeEEEec----Cc-----------CcCCHHH----HHHHHHCCCcEEee----cCccCCCH
Confidence 1122222222111111100 00 0000112 22222222223332 23345789
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC----ChhHHHHHHhcCC
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV----NHTEIGLLSRAGV 298 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~----~~~~i~~~~~~~~ 298 (400)
+.+..+++.|+++|+++.+|+..-.+. . .+|. ......+....+.|.... .++-|+.....++
T Consensus 234 ~~i~~aL~~A~~~gv~V~iHadtlne~-g-----------~~E~-t~aa~~gr~iH~~H~egaggghapd~~~~~~~~n~ 300 (573)
T PRK13206 234 AAIDACLRVADAAGVQVALHSDTLNEA-G-----------FVED-TLAAIAGRSIHAYHTEGAGGGHAPDIITVASHPNV 300 (573)
T ss_pred HHHHHHHHHHHHhCCEEEEECCCcccc-c-----------hhhH-HHHHhcCCeEEEEeccCCCcCcccHHHHhcCCCCC
Confidence 999999999999999999999643321 1 2222 111122222223333221 1233333333343
Q ss_pred eE-EECccc----c-----------------------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCC-HHH
Q 015784 299 KV-SHCPAS----A-----------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS-IVD 343 (400)
Q Consensus 299 ~~-~~~p~~----~-----------------------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~-~~~ 343 (400)
.. +..|.- | .|.+.++.-..|++.|+.++++||++..+...+ +.+
T Consensus 301 lp~stnpt~p~~~nt~~e~~~m~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~~~~~SDs~~~~~~~e~~~~ 380 (573)
T PRK13206 301 LPSSTNPTRPHTVNTLDEHLDMLMVCHHLNPAVPEDLAFAESRIRPSTIAAEDVLHDMGAISMIGSDSQAMGRIGEVVLR 380 (573)
T ss_pred cCCCCCCCCCCcccchhhhhCeEEeeccCCCCCcchhhhhhhhccceeeccCchHhhCCcEEeccCCccccccccchhhh
Confidence 32 222220 0 011233344668999999999999986322111 223
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+..+..+...+ ....+....+.++.+++|+++|.|||+++|+++.+|+|++||.|
T Consensus 381 ~~q~a~~~~~rr-~~l~g~~~~~~~~v~~al~~yT~nPA~alG~~~~~GsLe~Gk~A 436 (573)
T PRK13206 381 TWQTAHVMKRRR-GALPGDGRADNNRARRYVAKYTICPAVAHGIDHEIGSVEVGKLA 436 (573)
T ss_pred HHHHHHHHHhcc-CCCCCCCcccchhHHHHHHHHHHHHHHHhCCCcCCcccCCCCcC
Confidence 333332222211 11112223566999999999999999999999889999999987
|
|
| >PRK13404 dihydropyrimidinase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=8.3e-27 Score=220.72 Aligned_cols=327 Identities=17% Similarity=0.204 Sum_probs=186.2
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|+++++ . .+++|+|+||+|++|++.. + .+.++||++|++|+|||||+|+|+......
T Consensus 4 ~d~~i~~~~v~~~~~---~-~~~~i~I~dg~I~~i~~~~------~-~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~--- 69 (477)
T PRK13404 4 FDLVIRGGTVVTATD---T-FQADIGIRGGRIAALGEGL------G-PGAREIDATGRLVLPGGVDSHCHIDQPSGD--- 69 (477)
T ss_pred CcEEEECCEEEcCCC---c-eEEEEEEECCEEEEecCCC------C-CCCeEEECCCCEEecCEEEeEEcCCccccC---
Confidence 478999999997542 2 3579999999999998642 1 245899999999999999999999651100
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----CHHHHHHHHHHc-CCeEEEecccccC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELL-GLRACLVQSTMDC 173 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~-g~~~~~~~~~~~~ 173 (400)
.....++... ....++.+|||++.++... ......+..... .-.... +.
T Consensus 70 -----------------~~~~~e~~~~----~s~aa~~gGvTtv~~~~~~~~~~~~~~~l~~~~~~~~~~~~v-----d~ 123 (477)
T PRK13404 70 -----------------GIMMADDFYT----GTVSAAFGGTTTVIPFAAQHRGQSLREAVEDYHRRAAGKAVI-----DY 123 (477)
T ss_pred -----------------CccccchHHH----HHHHHHcCCccEEEEccCCCCCCCHHHHHHHHHHHhccCcEE-----EE
Confidence 0011122222 3356789999999997632 122222222211 111111 11
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh--
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ-- 251 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~-- 251 (400)
+...... . ..... ..+.+..+...+...++++..... ...+++.+.++++.++++|.+|.+|+.+......
T Consensus 124 ~~~~~~~--~-~~~~~---~~~~v~~l~~~G~~~iKi~~~~~~-~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~ 196 (477)
T PRK13404 124 AFHLIVA--D-PTEEV---LTEELPALIAQGYTSFKVFMTYDD-LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWLT 196 (477)
T ss_pred EEEEEec--C-CChhh---HHHHHHHHHHcCCCEEEEEecCCC-CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH
Confidence 1000000 0 00111 111123333334445776543222 4567788999999999999999999965433110
Q ss_pred -HHhh-------hcCCCC------ChH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCC--eEEECcccccc----
Q 015784 252 -VVMD-------TRKVDH------GTV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGV--KVSHCPASAMR---- 309 (400)
Q Consensus 252 -~~~~-------~~~~~~------~~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~--~~~~~p~~~~~---- 309 (400)
.... .+...+ ..+ +.+......+.+..+.|...-. -+.++.+++.|+ .+.+||...+-
T Consensus 197 ~~~~~~G~~~~~~~~~~rp~~~E~~~v~~~~~la~~~g~~~hi~Hvs~~~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~ 276 (477)
T PRK13404 197 KRLLAAGLTAPKYHAISRPMLAEREATHRAIALAELVDVPILIVHVSGREAAEQIRRARGRGLKIFAETCPQYLFLTAED 276 (477)
T ss_pred HHHHHCCCcchhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEChhhhccCHHH
Confidence 0010 000000 011 1222222334455566666421 245666666664 45677764220
Q ss_pred c-------------------cCcccHHHHHHcCCcEEEcCCCCCCCCC-----------CCHH--------HHHHHHHHH
Q 015784 310 M-------------------LGFAPIKEMLHADICVSLGTDGAPSNNR-----------MSIV--------DEMYLASLI 351 (400)
Q Consensus 310 ~-------------------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~-----------~~~~--------~~~~~~~~~ 351 (400)
+ .....+.+++..|...+++|||.|.... .+++ -++.+...+
T Consensus 277 ~~~~~~~g~~~k~~Pplr~~~d~~aL~~~l~~G~id~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l~~ll 356 (477)
T PRK13404 277 LDRPGMEGAKYICSPPPRDKANQEAIWNGLADGTFEVFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRLPLLF 356 (477)
T ss_pred hcCccccCCceEECCCCCChHHHHHHHHHHhCCCceEEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHHHHHH
Confidence 0 1122456677889999999999876310 1122 122333333
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+.. ....++++++++++|.|||++||+.+++|+|++|++|
T Consensus 357 ~~~v--------~~~~ls~~~~~~~~t~~pA~~lgl~~~~G~i~~G~~A 397 (477)
T PRK13404 357 SEGV--------VKGRISLNRFVALTSTNPAKLYGLYPRKGAIAIGADA 397 (477)
T ss_pred HHHH--------HcCCCCHHHHHHHHHHHHHHHhCCCCCCceecCCCcC
Confidence 2211 1335999999999999999999996567999999987
|
|
| >TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM | Back alignment and domain information |
|---|
Probab=99.95 E-value=6.1e-26 Score=208.11 Aligned_cols=303 Identities=20% Similarity=0.258 Sum_probs=173.4
Q ss_pred EEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCC
Q 015784 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDV 101 (400)
Q Consensus 22 li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~ 101 (400)
+|+|++|++.++ .++ ++|.|+||+|++|++... ...++||++|++|+|||||+|+|........ ..
T Consensus 1 ~i~~~~vv~~~~---~~~-~~i~i~dg~I~~i~~~~~-------~~~~~iD~~G~~v~PGlID~H~h~~e~~~~p---rp 66 (376)
T TIGR02318 1 VLSNARLVLEDE---VVE-GSVVIEDGAIADIGEGPV-------ALAEAIDGEGDLLLPGLIDLHTDNLERHMSP---RP 66 (376)
T ss_pred CEeCeEEECCCc---eEe-eeEEEECCEEEEecCCCC-------CCCceEeCCCCEEeccEEEcccCccccCcCC---CC
Confidence 589999997542 444 499999999999997432 2357899999999999999999986421110 00
Q ss_pred ChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------CCH---HHHH---HHHHHc-----CC
Q 015784 102 DLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHV---SEMA---KAVELL-----GL 162 (400)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------~~~---~~~~---~~~~~~-----g~ 162 (400)
+..|+ ..+.... ..++++++||||+.++.. ... +... +.++.. ..
T Consensus 67 -------~~~~~-----~~~~~~~----~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 130 (376)
T TIGR02318 67 -------GVDWP-----IDAAIVE----HDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRADH 130 (376)
T ss_pred -------CCCcc-----hHHHHHH----HHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhhc
Confidence 00111 0111121 336688899999998731 111 1222 222211 11
Q ss_pred eEEEecc------------cccCCC-CC-------CcccccCCchHHHHHHHHHHHHhccCCCCCeE----EEee--ccc
Q 015784 163 RACLVQS------------TMDCGE-GL-------PASWAVRTTDDCIQSQKELYAKHHHAADGRIR----IWFG--IRQ 216 (400)
Q Consensus 163 ~~~~~~~------------~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~ 216 (400)
+.+.... +...+. +| +..+...... ...+.+.+ +. +.+. -... ...
T Consensus 131 ~~h~~~e~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~--g~~~~e~~~~~~~~~~~ 202 (376)
T TIGR02318 131 RLHLRCELPNEEVLPELEELIDDPRVDLISLMDHTPGQRQFRDLE----KYREYYRG--KR--GLSDDEFDEIVEERIAR 202 (376)
T ss_pred eeEEEEEecCccHHHHHHHHhcCCCcCEEEEeCCCCCcccccCHH----HHHHHHHh--hc--CCCHHHHHHHHHHHHHH
Confidence 1111111 000000 00 0000000000 11111100 00 0000 0000 000
Q ss_pred cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhc
Q 015784 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA 296 (400)
Q Consensus 217 ~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~ 296 (400)
......+.++.+++.|++.|+++.+|..++...... ....|+. +++|. ++.+..+.+.+.
T Consensus 203 ~~~~~~e~i~~~v~~A~~~G~~v~sH~~~~~e~i~~--------------a~~~Gv~----~~E~~--~t~e~a~~~~~~ 262 (376)
T TIGR02318 203 RAEYGLANRSEIAALARARGIPLASHDDDTPEHVAE--------------AHDLGVT----ISEFP--TTLEAAKEARSL 262 (376)
T ss_pred HhhccHHHHHHHHHHHHHCCCeEEEecCCCHHHHHH--------------HHHCCCC----hhccC--CCHHHHHHHHHc
Confidence 002246789999999999999999999766653322 2233332 23343 578889999999
Q ss_pred CCeEEECccccccc---cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 015784 297 GVKVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 297 ~~~~~~~p~~~~~~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
|+.+..+...-.+. .+..++..+++.|+.++++||+.+. +++..+.. ... ...+++++++
T Consensus 263 G~~v~~~~p~~~r~~~~~~~~~l~~~~~~G~~~~l~SD~~p~----~~l~~~~~---~~~----------~~~gl~~~~a 325 (376)
T TIGR02318 263 GMQILMGAPNIVRGGSHSGNLSARELAHEGLLDVLASDYVPA----SLLLAAFQ---LAD----------DVEGIPLPQA 325 (376)
T ss_pred CCeEEECCccccccccccchHHHHHHHHCCCcEEEEcCCCcH----HHHHHHHH---HHH----------hhcCCCHHHH
Confidence 99987774322222 2356788999999999999999653 23322221 110 1235899999
Q ss_pred HHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 374 LRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 374 l~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++++|.|||+++|+++ +|+|++|++|
T Consensus 326 l~~~T~npA~~lgl~~-~G~I~~G~~A 351 (376)
T TIGR02318 326 VKMVTKNPARAVGLSD-RGSIAPGKRA 351 (376)
T ss_pred HHHHhHHHHHHcCCCC-CCcCCCCCcc
Confidence 9999999999999975 6999999987
|
This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs. |
| >PRK09237 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.1e-25 Score=208.85 Aligned_cols=307 Identities=17% Similarity=0.165 Sum_probs=179.6
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++... .....+|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|+.....
T Consensus 1 ~~i~~~~v~d~~~~--~~~~~~v~i~~g~I~~v~~~~~~----~-~~~~~iD~~g~~v~PG~iD~H~H~~~~~~------ 67 (380)
T PRK09237 1 LLLRGGRVIDPANG--IDGVIDIAIEDGKIAAVAGDIDG----S-QAKKVIDLSGLYVSPGWIDLHVHVYPGST------ 67 (380)
T ss_pred CEEEeEEEECCCCC--cccceEEEEECCEEEEecCCCCC----C-CCCeEEECCCCEEecCEEEeeecCCCCCC------
Confidence 47999999975433 34667999999999999875432 1 24689999999999999999999864110
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---CCHHHHHHHHHHc-CCeEEEecccccCCCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELL-GLRACLVQSTMDCGEG 176 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~---~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~ 176 (400)
.... ...+.++.+|+||+.+++. ...+...+..... +.+......+...++.
T Consensus 68 ---------------~~~~---------~~~~~~~~~G~Ttv~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~ 123 (380)
T PRK09237 68 ---------------PYGD---------EPDEVGVRSGVTTVVDAGSAGADNFDDFRKLTIEASKTRVLAFLNISRIGLL 123 (380)
T ss_pred ---------------ccCC---------CHHHHHHhCCcCEEEECCCCCCCCHHHHHHHHHhhhCcEEEEEEeeeccccc
Confidence 0000 0114488999999999753 3345555555544 5544322221112211
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
.+ ...........+...+.+.++...- -.++..+..........+.++....++++.|+++.+|+.+.....+.+.
T Consensus 124 ~~-~~~~~~~~~~~~~~~~~~~~~~~~v-~glk~~~~~~v~~~~~~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~l~-- 199 (380)
T PRK09237 124 AQ-DELADLEDIDADAVAEAVKRNPDFI-VGIKARMSSSVVGDNGIEPLELAKAIAAEANLPLMVHIGNPPPSLEEIL-- 199 (380)
T ss_pred cc-chhcCHhHCCHHHHHHHHHhCcCcE-EEEEEEEecccccccCCchHHHHHHHHHhcCCCEEEEcCCCCCCHHHHH--
Confidence 11 1111111112334444444333211 1123222211111111123444445566899999999976554322221
Q ss_pred cCCCCChHHHHhHhCCCCCCeeeEEecCCCh-----------hHHHHHHhcCCeEEECccccccccCcccHHHHHHcCC-
Q 015784 257 RKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI- 324 (400)
Q Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-----------~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~Gv- 324 (400)
... ....++.|+...+. +......++|+.+.+...+.. ......++++++|+
T Consensus 200 -----------~~l---~~g~~~~H~~~~~~~~~~~~~~~~~~~a~~~l~~G~~~~ig~g~~~--~~~~~~~~l~~~g~~ 263 (380)
T PRK09237 200 -----------ELL---RPGDILTHCFNGKPNRILDEDGELRPSVLEALERGVRLDVGHGTAS--FSFKVAEAAIAAGIL 263 (380)
T ss_pred -----------hhc---cCCCEEEecCCCCCCCccCCCCcchHHHHHHHHCCEEEEecCCCCc--ccHHHHHHHHHCCCC
Confidence 111 12235789887655 566777788888876532210 12234567788896
Q ss_pred cEEEcCCCCCCC----CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 325 CVSLGTDGAPSN----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 325 ~v~~gtD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.+++||..+.+ +...+...+..+. ..+++++++++++|.|||++||++ ++|+|++|+.|
T Consensus 264 ~~~l~tD~~~~~~~~~~~~~l~~~~~~~~---------------~~g~~~~~al~~aT~n~A~~lgl~-~~G~l~~G~~A 327 (380)
T PRK09237 264 PDTISTDIYCRNRINGPVYSLATVMSKFL---------------ALGMPLEEVIAAVTKNAADALRLP-ELGRLQVGSDA 327 (380)
T ss_pred ceEEECCCCCCCcccchHhHHHHHHHHHH---------------HhCCCHHHHHHHHHHHHHHHcCCC-CCCcCCCCCcC
Confidence 569999975532 1122333333322 135999999999999999999995 57999999987
|
|
| >cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology) | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.8e-26 Score=213.85 Aligned_cols=320 Identities=16% Similarity=0.144 Sum_probs=178.2
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++ ..+++|+|+||||++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~~----~~~~~v~I~~g~I~~i~~~~~~-----~~~~~~iDa~G~~v~PG~ID~H~H~~~~~------ 65 (447)
T cd01315 1 DLVIKNGRVVTPDG----VREADIAVKGGKIAAIGPDIAN-----TEAEEVIDAGGLVVMPGLIDTHVHINEPG------ 65 (447)
T ss_pred CEEEECCEEECCCC----ceEeEEEEECCEEEEEeCCCCC-----CCCCeEEECCCCEEeccEeeceeccCCCC------
Confidence 57999999997532 3567999999999999975321 12568999999999999999999985310
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-----CHHHHHHHHHHcC-CeEEEecccccC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLG-LRACLVQSTMDC 173 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-----~~~~~~~~~~~~g-~~~~~~~~~~~~ 173 (400)
....++... ..+.++++|||++.+++.. ......+...+.. ...........
T Consensus 66 -----------------~~~~e~~~~----~s~aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~- 123 (447)
T cd01315 66 -----------------RTEWEGFET----GTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWG- 123 (447)
T ss_pred -----------------ccccccHHH----HHHHHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEE-
Confidence 000112222 2356899999999998621 1112222211111 11111111000
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc---cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+ +.. ....+.. .+...+...+++++.... ....+.+.+.++++.+++.|+++.+|+.......
T Consensus 124 ~--~~~--------~~~~ei~----~l~~~G~~giKv~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~ 189 (447)
T cd01315 124 G--LVP--------GNLDQLR----PLDEAGVVGFKCFLCPSGVDEFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITE 189 (447)
T ss_pred e--ecC--------CCHHHHH----HHHHcCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHH
Confidence 0 000 0112222 222223334555443322 1235778899999999999999999996543211
Q ss_pred hHHhhhc----------CCC------CChH-HHHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcCCe--EEECcccccc-
Q 015784 251 QVVMDTR----------KVD------HGTV-TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVK--VSHCPASAMR- 309 (400)
Q Consensus 251 ~~~~~~~----------~~~------~~~~-~~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~~~--~~~~p~~~~~- 309 (400)
....... ... ...+ +.+......+.+..+.|.... .-+.++.++..|.. +.+||.....
T Consensus 190 ~~~~~~~~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~g~~ihi~h~s~~~~~~~i~~~~~~g~~i~~e~~~h~l~~~ 269 (447)
T cd01315 190 ALQEQAKAKGKRDYRDYLASRPVFTEVEAIQRILLLAKETGCRLHIVHLSSAEAVPLIREARAEGVDVTVETCPHYLTFT 269 (447)
T ss_pred HHHHhHhhcCCCChHHhhccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCceEEEeccccEEEc
Confidence 1111000 000 0011 222222233445666665542 12334555555544 4456653210
Q ss_pred ------------------c-cCcccHHHHHHcCCcEEEcCCCCCCCC------CCCHHH----------HHHHHHHHhcc
Q 015784 310 ------------------M-LGFAPIKEMLHADICVSLGTDGAPSNN------RMSIVD----------EMYLASLINKG 354 (400)
Q Consensus 310 ------------------~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~------~~~~~~----------~~~~~~~~~~~ 354 (400)
. .....+.++++.|...+++||+.+... ..+++. .|-......
T Consensus 270 ~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~~~~~~~~-- 347 (447)
T cd01315 270 AEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDIDMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGLPVMLTEA-- 347 (447)
T ss_pred HHHccCCCCceEECCCCCChHHHHHHHHHHhCCceeEEeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhHHHHHHHH--
Confidence 0 111234456788999999999876421 011211 111111110
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||+++|+++++|+|++|++|
T Consensus 348 --------~~~~~~~~~~~~~~~t~~pa~~~g~~~~~G~l~~g~~A 385 (447)
T cd01315 348 --------VNKRGLSLEDIARLMCENPAKLFGLSHQKGRIAVGYDA 385 (447)
T ss_pred --------HHcCCCCHHHHHHHHhHHHHHHhCCCCCCccccCCCCC
Confidence 01345999999999999999999998768999999987
|
But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid. |
| >PLN02303 urease | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-26 Score=216.92 Aligned_cols=318 Identities=18% Similarity=0.203 Sum_probs=185.0
Q ss_pred CCCCCCCCCCCC-CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhh--hhh-----hccCCCcEEeCCCc
Q 015784 5 SSGGGSSSGSLG-SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI--LQQ-----FSQMADQIIDLQSQ 76 (400)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~--~~~-----~~~~~~~viD~~g~ 76 (400)
+.|++.++.... ...+++|+|++|++.. . +.+++|+|+||+|++|++.... +.. .-..++++||++|+
T Consensus 319 r~gm~~~~~~~~~~~~DlVItNa~IID~~---G-i~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGl 394 (837)
T PLN02303 319 RDGMGQATGYGAADSLDTVITNAVIIDYT---G-IYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGM 394 (837)
T ss_pred ccCCCcCCCCCCcCcCCEEEeCeEEECCC---C-cEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCC
Confidence 345555444432 3468999999999733 2 3567999999999999974311 110 01124699999999
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---------
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------- 147 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------- 147 (400)
+|+|||||+|+|+.. ..+. ..++.+|+|++...+.
T Consensus 395 IVtPG~ID~HVHf~~------------------------Pg~~------------~eaLasGVTTai~GGtgp~pnT~pt 438 (837)
T PLN02303 395 IVTAGGIDCHVHFIC------------------------PQLA------------TEAIASGITTLVGGGTGPAHGTCAT 438 (837)
T ss_pred EEEeCEEEeecCCCC------------------------CcHH------------HHHHHHhHHHHHhcCCCCCCcccCc
Confidence 999999999999843 1110 2244445555554321
Q ss_pred ------CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCC
Q 015784 148 ------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT 221 (400)
Q Consensus 148 ------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
..+..+.+.++...+...+.. .+ ......+..+.. .. +... +.++..+..+
T Consensus 439 t~t~g~e~I~~~L~aa~~~pvn~Gf~g----kG-----------~~s~l~eL~eli----ea--Ga~G--fK~h~d~gvT 495 (837)
T PLN02303 439 TCTPAPSHMKLMLQSTDDLPLNFGFTG----KG-----------NTAKPEGLHEII----KA--GAMG--LKLHEDWGTT 495 (837)
T ss_pred CCCCCHHHHHHHHHhcccCCCcEEEEc----cC-----------cccCHHHHHHHH----Hc--CcEE--EEECCCCCCC
Confidence 112223333333333322110 00 001122222222 11 2222 3344455778
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchh---hhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCC
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYE---NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~ 298 (400)
++.+.++++.|+++|+++++|+ |+..+ ++...+.++. ++++++...|..+. |. ++-|+.....++
T Consensus 496 pelL~raLe~AkelGVpVaIHA-EdLnE~G~vE~t~~a~G~--RpIh~~h~~Ga~gg-----ha----pdi~~~~~~~nv 563 (837)
T PLN02303 496 PAAIDNCLDVAEEYDIQVTIHT-DTLNESGCVEHSIAAFKG--RTIHTYHSEGAGGG-----HA----PDIIKVCGVKNV 563 (837)
T ss_pred HHHHHHHHHHHHHcCCEEEEec-CcccccchHHHHHHHHCC--ChHHHHHhcCCCCC-----CC----cHHHHhcCCCCc
Confidence 9999999999999999999995 55545 6666777764 48899999888763 11 111111111111
Q ss_pred e---------------------EEECcccc-------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCC----CC
Q 015784 299 K---------------------VSHCPASA-------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNR----MS 340 (400)
Q Consensus 299 ~---------------------~~~~p~~~-------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~----~~ 340 (400)
. +.+|..-+ .|.+.++.-..|.+.|+...++||+...+.. .-
T Consensus 564 lpsstnpt~p~t~nt~~e~~dm~m~~h~l~~~~~edvafa~srir~~tiaaed~l~d~G~~s~~~SDs~amgr~ge~i~r 643 (837)
T PLN02303 564 LPSSTNPTRPYTKNTIDEHLDMLMVCHHLDKNIPEDVAFAESRIRAETIAAEDILHDMGAISIISSDSQAMGRIGEVITR 643 (837)
T ss_pred cCCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCCEEEEeccchhhCcccceeee
Confidence 1 11111111 1123344446688999999999998743221 12
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.|++...+ ...+..+.........++++++|+++|.|||+++|+++++|+|++||.|
T Consensus 644 ~~q~A~k~---~~~~g~l~~~~~~~dn~rv~~aL~~~TiN~A~AlG~~~~vGSLe~GK~A 700 (837)
T PLN02303 644 TWQTAHKM---KSQRGALEPRGADNDNFRIKRYIAKYTINPAIAHGMSHFVGSVEVGKLA 700 (837)
T ss_pred hHHHHHHH---HHhcCCCCCccccccccCHHHHHHHHhHHHHHHCCcccCceeeCCCccc
Confidence 33333333 1111111111112345789999999999999999999999999999987
|
|
| >cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-27 Score=217.31 Aligned_cols=306 Identities=15% Similarity=0.121 Sum_probs=176.0
Q ss_pred CCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHH
Q 015784 47 QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYIS 126 (400)
Q Consensus 47 ~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (400)
||+|++|++..+.+ .+.++||++|++|+|||||+|+|++...........+..+ ...++.+.+...+.+.+
T Consensus 1 ~gkI~~i~~~~~~~-----~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e----~~~~~~p~~~~~d~~~~ 71 (359)
T cd01309 1 DGKIVAVGAEITTP-----ADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANE----ETDPVTPHVRAIDGINP 71 (359)
T ss_pred CCEEEEEcCCCCCC-----CCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccc----cCCCCCceeEeecccCC
Confidence 79999999865422 2568999999999999999999998866554443333211 11222344444555666
Q ss_pred HHHHHHHHHhcCcceeeccCc-CCHH------------HHHHHHHHcCCeEEEecccccCCCCCCcccc--cCCchHH-H
Q 015784 127 TLLCGIELIHSGVTCFAEAGG-QHVS------------EMAKAVELLGLRACLVQSTMDCGEGLPASWA--VRTTDDC-I 190 (400)
Q Consensus 127 ~~~~~~~~l~~GvTt~~~~~~-~~~~------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~ 190 (400)
....+..++++|||++....+ ..+- ...+...+....... .+.+.+....... ....... .
T Consensus 72 ~~~~~~~a~~~GvT~~~v~p~~~~~~gg~~~~i~~~~~~~~~~~~~~~~~~~~---a~g~~~~~~~~~~~~~p~trmg~~ 148 (359)
T cd01309 72 DDEAFKRARAGGVTTVQVLPGSANLIGGQGVVIKTDGGTIEDMFIKAPAGLKM---ALGENPKRVYGGKGKEPATRMGVA 148 (359)
T ss_pred CCHhHHHHHhcCceEEEecCCCCCcccceEEEEECCCCCHHHhcccCCceeEE---ecCCCCcccccccCCCccchHHHH
Confidence 666677899999999986531 1100 000111111111110 1111100000000 0001110 1
Q ss_pred HHHHHHH---HHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHH
Q 015784 191 QSQKELY---AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL 267 (400)
Q Consensus 191 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l 267 (400)
....+.+ +.+......... ....... .+..++.+...++. .+++.+|+..... ... .++..
T Consensus 149 ~~lr~~~~~a~~y~~~~~~~~~---~~~~~~~-~d~~l~~l~~~~~~-~~~v~vHa~~~~~-i~~----------~l~~~ 212 (359)
T cd01309 149 ALLRDAFIKAQEYGRKYDLGKN---AKKDPPE-RDLKLEALLPVLKG-EIPVRIHAHRADD-ILT----------AIRIA 212 (359)
T ss_pred HHHHHHHHHHHHHHHHhhhhhh---cccCCCC-CCccHHHHHHHHcC-CeeEEEEeCCHHH-HHH----------HHHHH
Confidence 1111111 111110000000 0000001 11134555555443 3899999975433 111 33344
Q ss_pred hHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc------cCcccHHHHHHcC-CcEEEcCCCCCCCCCCC
Q 015784 268 DKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM------LGFAPIKEMLHAD-ICVSLGTDGAPSNNRMS 340 (400)
Q Consensus 268 ~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~------~~~~~~~~~~~~G-v~v~~gtD~~~~~~~~~ 340 (400)
.+++ .+.++.|+... ++.++++++.|+.++++|..+... .+..+++++.++| +++++|||++.. +...
T Consensus 213 ~e~g---~~~~i~H~~~~-~~~~~~la~~gv~v~~~P~~~~~~~~~~~~~~~~~~~~l~~aGGv~valgsD~~~~-~~~~ 287 (359)
T cd01309 213 KEFG---IKITIEHGAEG-YKLADELAKHGIPVIYGPTLTLPKKVEEVNDAIDTNAYLLKKGGVAFAISSDHPVL-NIRN 287 (359)
T ss_pred HHcC---CCEEEECchhH-HHHHHHHHHcCCCEEECccccccccHHHhhcchhhHHHHHHcCCceEEEECCCCCc-cchh
Confidence 4444 35789999986 888999999999999999875432 3556889999998 999999999743 1222
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++.++..+. ..+++++++|+++|.|||++||+++++|+|++||.|
T Consensus 288 l~~~~~~a~---------------~~gl~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~A 332 (359)
T cd01309 288 LNLEAAKAV---------------KYGLSYEEALKAITINPAKILGIEDRVGSLEPGKDA 332 (359)
T ss_pred HHHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHhCCCCCcccCCCCCcc
Confidence 333333222 235899999999999999999999989999999987
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. |
| >TIGR03178 allantoinase allantoinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-27 Score=223.36 Aligned_cols=319 Identities=17% Similarity=0.167 Sum_probs=178.3
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++ ..+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+....
T Consensus 1 dl~i~~~~v~~~~~----~~~~~v~i~dg~I~~i~~~~~------~~~~~~id~~g~~v~PG~ID~H~H~~~~~------ 64 (443)
T TIGR03178 1 DLIIRGGRVILPNG----EREADVGVKGGKIAAIGPDIL------GPAAKIIDAGGLVVFPGVVDTHVHINEPG------ 64 (443)
T ss_pred CEEEECcEEECCCC----ceEEEEEEECCEEEEeeCCCC------CCCCeEEECCCCEEeccEeccccccCCCC------
Confidence 47899999998642 246899999999999987521 12568999999999999999999985410
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cCC----HHHHHHHHHHcCC-eEEEecccccC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQH----VSEMAKAVELLGL-RACLVQSTMDC 173 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~~----~~~~~~~~~~~g~-~~~~~~~~~~~ 173 (400)
....++... ....++++|||++.++. ... .....+...+... +...-.... .
T Consensus 65 -----------------~~~~~~~~~----~~~~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~-~ 122 (443)
T TIGR03178 65 -----------------RTEWEGFET----GTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFW-G 122 (443)
T ss_pred -----------------ccccchHHH----HHHHHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEE-e
Confidence 000112111 33568999999999986 211 1111111111111 100000000 0
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc---cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+ .. .....+ +..+...+...+++++.+.. ....+++.+.++++.+++.|+++.+|+ |+....
T Consensus 123 ~--~~--------~~~~~~----i~~~~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-E~~~~~ 187 (443)
T TIGR03178 123 G--LV--------PYNLDD----LRELDEAGVVGFKAFLSPSGDDEFPHVDDWQLYKGMRELARLGQLLLVHA-ENPAIT 187 (443)
T ss_pred c--cC--------CCCHHH----HHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHhcCCeEEEec-cChHHH
Confidence 0 00 111122 23333333334666554432 235678899999999999999999995 444332
Q ss_pred hHH----hh-------hcCCCC------ChH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCCeE--EECccccc-
Q 015784 251 QVV----MD-------TRKVDH------GTV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVKV--SHCPASAM- 308 (400)
Q Consensus 251 ~~~----~~-------~~~~~~------~~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~~--~~~p~~~~- 308 (400)
... .. .+-..+ ..+ +.+......+.+..+.|..... -+.++.+++.|+.+ .+||....
T Consensus 188 ~~~~~~~~~~g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~g~~vhi~Hiss~~~~~~i~~~~~~g~~it~e~~ph~l~l 267 (443)
T TIGR03178 188 SALGEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVTGCRVHVVHLSSAEAVELITEAKQEGLDVTVETCPHYLTL 267 (443)
T ss_pred HHHHHHHHhcCCCChhHhcCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEECccceEe
Confidence 211 00 000000 011 1222222233455555655421 24456666666554 45776421
Q ss_pred -----c-----c---------cCcccHHHHHHcCCcEEEcCCCCCCCC----CCCHHHHH--------HHHHHHhccccc
Q 015784 309 -----R-----M---------LGFAPIKEMLHADICVSLGTDGAPSNN----RMSIVDEM--------YLASLINKGREV 357 (400)
Q Consensus 309 -----~-----~---------~~~~~~~~~~~~Gv~v~~gtD~~~~~~----~~~~~~~~--------~~~~~~~~~~~~ 357 (400)
. . .....+.+.++.|...+++|||.|... ..+++..+ .+...+...
T Consensus 268 ~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~SDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~--- 344 (443)
T TIGR03178 268 TAEEVPDGGTLAKCAPPIRDLANQEGLWEALLNGLIDCVVSDHSPCTPDLKRAGDFFKAWGGIAGLQSTLDVMFDEA--- 344 (443)
T ss_pred cHHHhhCcCcceEEcCCCCChHHHHHHHHHHHcCCccEEeCCCCCCChHHcCcCChhhCCCCeeEHHHhHHHHHHHH---
Confidence 0 0 011133455778999999999976521 11222111 111111000
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 358 FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 358 ~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||+++|+. +.|+|++|+.|
T Consensus 345 -----~~~~~l~~~~~~~~~t~~pA~~~g~~-~~G~l~~G~~A 381 (443)
T TIGR03178 345 -----VQKRGLPLEDIARLMATNPAKRFGLA-QKGRIAPGKDA 381 (443)
T ss_pred -----HHhcCCCHHHHHHHHhHHHHHHcCCC-CCCccCCCCcC
Confidence 01345999999999999999999995 46999999987
|
This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases. |
| >PLN02795 allantoinase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-26 Score=217.12 Aligned_cols=328 Identities=16% Similarity=0.162 Sum_probs=185.4
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|++.++ . ..++|+|+||+|++|++....+.. ..+.++||+.|++|+|||||+|+|+...
T Consensus 44 ~~~vi~~~~vv~~~~---~-~~~~v~i~dG~I~~I~~~~~~~~~--~~~~~~ida~G~~v~PG~ID~H~H~~~~------ 111 (505)
T PLN02795 44 PHFVLYSKRVVTPAG---V-IPGAVEVEGGRIVSVTKEEEAPKS--QKKPHVLDYGNAVVMPGLIDVHVHLNEP------ 111 (505)
T ss_pred cceEEECCEEEECCC---e-EEEEEEEECCEEEEecCccccccc--cCCCEEEECCCCEEecCEEecccCcCCC------
Confidence 689999999998532 2 358999999999999975431110 1245899999999999999999998431
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-CC----HHHHHHHHHHcCCeEEEecccccC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QH----VSEMAKAVELLGLRACLVQSTMDC 173 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-~~----~~~~~~~~~~~g~~~~~~~~~~~~ 173 (400)
.....++... ..+.++.+|||++.+|.. .. .....+...+... .....+.
T Consensus 112 -----------------~~~~~e~~~~----~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~----~~~~vd~ 166 (505)
T PLN02795 112 -----------------GRTEWEGFPT----GTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAK----GKLYVDV 166 (505)
T ss_pred -----------------CccchhHHHH----HHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhc----cCceeee
Confidence 0001122222 335688899999999862 11 1222222222111 1111121
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccc---cCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM---NATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+.. ... ...... ..+.+..+...+...+++++.++... ..+++.+.++++.++++|+++++|+.+.....
T Consensus 167 ~~~--~~~-~~~~~~----~~~~l~~~~~~G~~g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~ 239 (505)
T PLN02795 167 GFW--GGL-VPENAH----NASVLEELLDAGALGLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVE 239 (505)
T ss_pred ece--ecc-cCcchh----HHHHHHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHhh
Confidence 110 000 000011 12222222222222366666555433 56788999999999999999999997654211
Q ss_pred -hHHhh-------hcCCCC------ChH-HHHhHhCCC-------CCCeeeEEecCC-C-hhHHHHHHhcC--CeEEECc
Q 015784 251 -QVVMD-------TRKVDH------GTV-TFLDKIEFL-------QNNLLSAHTVWV-N-HTEIGLLSRAG--VKVSHCP 304 (400)
Q Consensus 251 -~~~~~-------~~~~~~------~~~-~~l~~~~~~-------~~~~~~~h~~~~-~-~~~i~~~~~~~--~~~~~~p 304 (400)
..... .+..++ ..+ ..+...... +.+..+.|.... . -+.++.+++.| +.+.+||
T Consensus 240 ~~~~~~~~~~~~~~~~~~rP~~aE~~ai~~~~~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev~p 319 (505)
T PLN02795 240 SDSRLDADPRSYSTYLKSRPPSWEQEAIRQLLEVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVETCP 319 (505)
T ss_pred hhhhhhcCCcChhHhcccCCHHHHHHHHHHHHHHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEeCh
Confidence 00000 000000 011 111122122 456666776653 1 23456666677 5567788
Q ss_pred cccc-----------c------c---cCcccHHHHHHcCCcEEEcCCCCCCCCCC------CHHH--------HHHHHHH
Q 015784 305 ASAM-----------R------M---LGFAPIKEMLHADICVSLGTDGAPSNNRM------SIVD--------EMYLASL 350 (400)
Q Consensus 305 ~~~~-----------~------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~------~~~~--------~~~~~~~ 350 (400)
...+ . + .....+.+.+..|...+++|||.|.+... +++. +......
T Consensus 320 h~L~l~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l~~~ 399 (505)
T PLN02795 320 HYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVLPAT 399 (505)
T ss_pred hhhcccHHHccCCCCceEEcCCCCChHHHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHHHHH
Confidence 6321 0 0 11123455677899999999998762111 1110 0111111
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.. ....+++++++++++|.|||+++|+. ++|.|++|++|
T Consensus 400 ~~~---------~~~~~l~l~~~v~~~s~~pA~~~gl~-~~G~l~~G~~A 439 (505)
T PLN02795 400 WTA---------GRAYGLTLEQLARWWSERPAKLAGLD-SKGAIAPGKDA 439 (505)
T ss_pred HHH---------HHHcCCCHHHHHHHHHHHHHHHhCCC-CCCccCCCCcc
Confidence 111 01345899999999999999999995 46999999987
|
|
| >PRK13985 ureB urease subunit beta; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.2e-25 Score=203.69 Aligned_cols=320 Identities=18% Similarity=0.173 Sum_probs=180.7
Q ss_pred CCCCCCCCCCCCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhh-------hhccCCCcEEeCCCcE
Q 015784 5 SSGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-------QFSQMADQIIDLQSQI 77 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~-------~~~~~~~~viD~~g~~ 77 (400)
+.|++.++....+..+++|+|++|++.. . +.+++|.|+||+|++|++...... .....++++||++|++
T Consensus 51 r~g~~~~~~~~~~~~DlVI~Na~IiD~~---g-i~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~i 126 (568)
T PRK13985 51 REGMSQSNNPSKEELDLIITNALIIDYT---G-IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLI 126 (568)
T ss_pred ccCCCCCCCCCCCcCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCE
Confidence 3555665555556778999999999743 2 346799999999999997532110 0001357899999999
Q ss_pred eeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC---------
Q 015784 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------- 148 (400)
Q Consensus 78 v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------- 148 (400)
|+|||||+|+|+.. .. .+ ..++++||||+.+++..
T Consensus 127 V~PG~ID~HvH~~~------------------------P~-----~~-------~~AlagGVTTvI~~G~gP~~~T~p~~ 170 (568)
T PRK13985 127 VTAGGIDTHIHFIS------------------------PQ-----QI-------PTAFASGVTTMIGGGTGPADGTNATT 170 (568)
T ss_pred EEeCEEEeeCCCCC------------------------cc-----HH-------HHHhcCceEEEEccCcCCCCCCCCcC
Confidence 99999999999843 10 01 23889999999985211
Q ss_pred ---C---HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCH
Q 015784 149 ---H---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222 (400)
Q Consensus 149 ---~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
. +..+.+.++...+..... ..+ ......+..+.+ .. +.+. +..+..+..++
T Consensus 171 ~tpg~~~i~~ml~~a~~~pvn~gf~----gkG-----------~~~~l~eL~el~----~a--GA~G--fK~~ed~g~t~ 227 (568)
T PRK13985 171 ITPGRRNLKWMLRAAEEYSMNLGFL----GKG-----------NSSNDASLADQI----EA--GAIG--FKIHEDWGTTP 227 (568)
T ss_pred CCCcHHHHHHHHHHhhccCccEEEe----cCC-----------ccCCHHHHHHHH----Hc--CCEE--EEECCccCCCH
Confidence 1 233444444333222111 001 001122222222 22 2332 22334455788
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC----hhHHHHHHhcCC
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGV 298 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~----~~~i~~~~~~~~ 298 (400)
..+..+++.|+++++++.+|+..-... . .+|. ......+....+.|..... ++-++.....++
T Consensus 228 ~~I~~aL~vA~~~dv~V~iHtdtlne~-g-----------~~E~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nv 294 (568)
T PRK13985 228 SAINHALDVADKYDVQVAIHTDTLNEA-G-----------CVED-TMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNI 294 (568)
T ss_pred HHHHHHHHHHHHcCCEEEEeCCCCCCc-h-----------hhHH-HHHHhcCCeEEEEeccCCCccchhhHHHHcCCCCc
Confidence 899999999999999999999754321 1 2221 1111122222223322211 222333323333
Q ss_pred e-EEECccc----c-----------------------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCC-HHH
Q 015784 299 K-VSHCPAS----A-----------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS-IVD 343 (400)
Q Consensus 299 ~-~~~~p~~----~-----------------------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~-~~~ 343 (400)
. .+..|.- | .|.+.++.-.-|.+.|+...++||+...+.... ..+
T Consensus 295 lp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~ed~afa~srir~~tiaaed~l~d~G~~s~~~SDs~~mgr~ge~~~r 374 (568)
T PRK13985 295 LPASTNPTIPFTVNTEAEHMDMLMVCHHLDKSIKEDVQFADSRIRPQTIAAEDTLHDMGIFSITSSDSQAMGRVGEVITR 374 (568)
T ss_pred ccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccccccccCchhhhCCcEEEEeccchhhCcccceeee
Confidence 3 2222220 0 011223334558899999999999874322112 112
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
-.+.+..+.+.+..+.+.......+++++||+++|.|||+++|+++++|+|++||.|
T Consensus 375 ~~q~a~k~~~~~g~l~~~~~~~dnl~v~eAL~~yTin~A~A~G~e~~vGSLe~GK~A 431 (568)
T PRK13985 375 TWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVA 431 (568)
T ss_pred hHHHHHHHHHhcCCCCCccccccccCHHHHHHHHhHHHHHHcCcccCceeECCCCcc
Confidence 222222222211111111112345899999999999999999999999999999987
|
|
| >PRK07627 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.1e-25 Score=206.79 Aligned_cols=317 Identities=15% Similarity=0.157 Sum_probs=178.1
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++.+. ...+++|+|+||+|++|++... +..+.++||++|++|+|||||+|+|+...
T Consensus 2 ~~~i~~~~v~~~~~~--~~~~~~I~I~~g~I~~i~~~~~-----~~~~~~~iDa~g~~vlPG~iD~H~H~~~~------- 67 (425)
T PRK07627 2 KIHIKGGRLIDPAAG--TDRQADLYVAAGKIAAIGQAPA-----GFNADKTIDASGLIVCPGLVDLSARLREP------- 67 (425)
T ss_pred eEEEEeeEEECCCCC--ccceeEEEEECCEEEEecCCCc-----CCCCCeEEECCCCEEeccEEeccccccCC-------
Confidence 689999999975432 3466899999999999987421 11356899999999999999999999541
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC--------HHHHHHHHHHc-CCeEEEeccc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVELL-GLRACLVQST 170 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~--------~~~~~~~~~~~-g~~~~~~~~~ 170 (400)
.....++... ....++.+||||+.++.... .+...+..... +... +....
T Consensus 68 ----------------g~~~~e~~~t----~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 126 (425)
T PRK07627 68 ----------------GYEYKATLES----EMAAAVAGGVTSLVCPPDTDPVLDEPGLVEMLKFRARNLNQAHV-YPLGA 126 (425)
T ss_pred ----------------CccccCcHHH----HHHHHHhCCeeEEEeCCCCCCCCCCHHHHHHHHHHhhccCceeE-EEeCe
Confidence 0001122222 23668999999999875322 11112111111 1222 11111
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+..+ . ....+.+..++. .. .+..+.. ......+...+.++++.+++.|.++.+|+.+.....
T Consensus 127 ~~~g------~----~~~~~~~i~~l~----~~---G~~~fk~-~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~~ 188 (425)
T PRK07627 127 LTVG------L----KGEVLTEMVELT----EA---GCVGFSQ-ANVPVVDTQVLLRALQYASTFGFTVWLRPLDAFLGR 188 (425)
T ss_pred EEcC------C----CccCHHHHHHHH----hC---CEEEEEc-CCcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhh
Confidence 1111 0 111122222221 11 2222221 122245677899999999999999999997543211
Q ss_pred hHH------hhhcC-CCCC------hH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECcccccc----
Q 015784 251 QVV------MDTRK-VDHG------TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAMR---- 309 (400)
Q Consensus 251 ~~~------~~~~~-~~~~------~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~~---- 309 (400)
... ....+ ..+- .+ +.+......+.+..+.|..... -+.++.+++.| +.+.+||.+...
T Consensus 189 ~~~~~~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~ 268 (425)
T PRK07627 189 GGVAASGAVASRLGLSGVPVAAETIALHTIFELMRVTGARVHLARLSSAAGVALVRAAKAEGLPVTCDVGVNHVHLIDVD 268 (425)
T ss_pred CCCcCCCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHCCCCeEEEeccchheEeHhH
Confidence 000 00000 0000 11 1222222334566666665522 24456566666 445678874220
Q ss_pred -------------c---cCcccHHHHHHcCCcEEEcCCCCCCCC---CCCHHH--------HHHHHHHHhcccccccCCC
Q 015784 310 -------------M---LGFAPIKEMLHADICVSLGTDGAPSNN---RMSIVD--------EMYLASLINKGREVFANGT 362 (400)
Q Consensus 310 -------------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~---~~~~~~--------~~~~~~~~~~~~~~~~~~~ 362 (400)
+ .....+.+.+++|...+++|||.|... ..+++. +......+..
T Consensus 269 ~~~~~~~~k~~PPLR~~~d~~~L~~~l~~G~id~i~SDHaP~~~~~k~~~~~~~~~G~~g~e~~~pl~~~~--------- 339 (425)
T PRK07627 269 IGYFDSQFRLDPPLRSQRDREAIRAALADGTIDAICSDHTPVDDDEKLLPFAEATPGATGLELLLPLTLKW--------- 339 (425)
T ss_pred HhccCCceEEeCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCCHHHccCCHhhCCCCceeHHHHHHHHHHH---------
Confidence 0 112245667888999999999965421 001111 1111111110
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 363 TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 363 ~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||+++|+ + .|+|++|+.|
T Consensus 340 ~~~~~i~~~~~l~~~t~~pA~~lg~-~-~G~l~~G~~A 375 (425)
T PRK07627 340 ADEAKVPLARALARITSAPARVLGL-P-AGRLAEGAPA 375 (425)
T ss_pred HHhCCCCHHHHHHHHHHHHHHHhCC-C-CCcccCCCcC
Confidence 1134699999999999999999999 3 5999999987
|
|
| >PRK09236 dihydroorotase; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-25 Score=207.69 Aligned_cols=105 Identities=19% Similarity=0.286 Sum_probs=71.4
Q ss_pred EEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCC------------CCCCHHHHHH
Q 015784 280 AHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN------------NRMSIVDEMY 346 (400)
Q Consensus 280 ~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~------------~~~~~~~~~~ 346 (400)
.|+.+++++++.. .+..+.++|. ++. .+..++.+++++|+++++|||+.+.. ++.+.+..+
T Consensus 262 ~H~l~l~~~~~~~---~~~~~~~~Pp--lr~~~~~~~l~~~l~~G~i~~igtDh~p~~~~~k~~~~~~~~~G~~~~e~~- 335 (444)
T PRK09236 262 VHHLWFDDSDYAR---LGNLIKCNPA--IKTASDREALRQALADDRIDVIATDHAPHTWEEKQGPYFQAPSGLPLVQHA- 335 (444)
T ss_pred hhhhhcCHHHHhc---cCceEEECCC--CCCHHHHHHHHHHHhCCCCcEEECCCCCCCHHHhcCCcccCCCCcccHHHH-
Confidence 3555556655542 3666777775 444 56678999999999999999997651 111122221
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 347 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+... ...+++++++++++|.|||++||+.+ .|+|++|++|
T Consensus 336 l~~l~~~v---------~~~~~~~~~~~~~~t~~pA~~lgl~~-~G~l~~G~~A 379 (444)
T PRK09236 336 LPALLELV---------HEGKLSLEKVVEKTSHAPAILFDIKE-RGFIREGYWA 379 (444)
T ss_pred HHHHHHHH---------HhcCCCHHHHHHHHHHhHHHhcCCCC-CCccccCCcC
Confidence 11111111 13359999999999999999999965 5999999987
|
|
| >PRK06189 allantoinase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-25 Score=208.50 Aligned_cols=321 Identities=17% Similarity=0.184 Sum_probs=178.9
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|+++++ ..+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+...
T Consensus 3 ~~~~i~~~~v~~~~~----~~~~~v~i~~G~I~~i~~~~~------~~~~~~iD~~g~~vlPG~ID~H~H~~~~------ 66 (451)
T PRK06189 3 YDLIIRGGKVVTPEG----VYRADIGIKNGKIAEIAPEIS------SPAREIIDADGLYVFPGMIDVHVHFNEP------ 66 (451)
T ss_pred ccEEEECCEEEcCCC----cEEEEEEEECCEEEEecCCCC------CCCCeEEECCCCEEecCEEEeeeccCCC------
Confidence 578999999997542 246899999999999987532 1246899999999999999999998541
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cC-----CHHHHHHHHHHcCCeEEEeccccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~-----~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
.....++... ..+.++++|+|++.++. +. ..+......+........-...+
T Consensus 67 -----------------~~~~~~~~~~----~~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~~- 124 (451)
T PRK06189 67 -----------------GRTHWEGFAT----GSAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALW- 124 (451)
T ss_pred -----------------CCCCcccHHH----HHHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEEE-
Confidence 0001112222 22568899999999985 11 11222221111111111111111
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeec---cccccCCHHHHHHHHHHHHHcCCeeeEecCCCchh
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI---RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (400)
.+ . ......+... +...+...+++++.. ......+...+.++++.+++.+..+.+|+.+....
T Consensus 125 ~~--~--------~~~~~~~l~~----l~~~Gv~~~k~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~~~ 190 (451)
T PRK06189 125 GG--L--------VPGNLEHLRE----LAEAGVIGFKAFMSNSGTDEFRSSDDLTLYEGMKEIAALGKILALHAESDALT 190 (451)
T ss_pred ec--c--------cccCHHHHHH----HHHcCCcEEEEEccccCCCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChHHH
Confidence 00 0 0111222222 222222233443321 11224566788899999899999999999654321
Q ss_pred hhH---Hhh-------hcCCCC------ChH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECccccc-
Q 015784 250 NQV---VMD-------TRKVDH------GTV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAM- 308 (400)
Q Consensus 250 ~~~---~~~-------~~~~~~------~~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~- 308 (400)
... +.. .+-..+ ..+ +.+......+.+..+.|..... -+.++.+++.| +.+.+||...+
T Consensus 191 ~~~~~~~~~~g~~~~~~~~~~~P~~~E~~~v~~~l~la~~~g~~~hi~HiSt~~~~~~i~~~k~~g~~vt~ev~ph~L~l 270 (451)
T PRK06189 191 RHLTTQARQQGKTDVRDYLESRPVVAELEAVQRALLYAQETGCPLHFVHISSGKAVALIAEAKKRGVDVSVETCPHYLLF 270 (451)
T ss_pred HHHHHHHHhcCCCChhHccccCCHHHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHHHHHHHCCCcEEEEeCHHHhhc
Confidence 100 000 000000 011 1222222334455555555421 23455555566 44567775321
Q ss_pred ------------------cc-cCcccHHHHHHcCCcEEEcCCCCCCCCC----CCHHHH--------HHHHHHHhccccc
Q 015784 309 ------------------RM-LGFAPIKEMLHADICVSLGTDGAPSNNR----MSIVDE--------MYLASLINKGREV 357 (400)
Q Consensus 309 ------------------~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~----~~~~~~--------~~~~~~~~~~~~~ 357 (400)
+. ....++.+++++|+.++++|||.+.+.. .+++.. ......+...
T Consensus 271 ~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~i~sDh~p~~~~~K~~~~~~~~~~G~~g~e~~l~~~~~~~--- 347 (451)
T PRK06189 271 TEEDFERIGAVAKCAPPLRSRSQKEELWRGLLAGEIDMISSDHSPCPPELKEGDDFFLVWGGISGGQSTLLVMLTEG--- 347 (451)
T ss_pred CHhHhhCcCCceEEeCCCCChhhHHHHHHHHhCCCceEEECCCCCCCHHHcCcCCcccCCCCceeHHHHHHHHHHHH---
Confidence 11 1223566788999999999999876321 123221 2222222211
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 358 FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 358 ~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||++||++ +.|+|++|++|
T Consensus 348 -----~~~~~l~~~~~~~~~t~npA~~lgl~-~~G~l~~G~~A 384 (451)
T PRK06189 348 -----YIERGIPLETIARLLATNPAKRFGLP-QKGRLEVGADA 384 (451)
T ss_pred -----HhcCCCCHHHHHHHHhhhHHHHhCCC-CCCcccCCCcC
Confidence 12345999999999999999999995 46999999987
|
|
| >PRK07575 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-26 Score=212.06 Aligned_cols=314 Identities=17% Similarity=0.225 Sum_probs=177.8
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|++.++ ...+++|+|+||+|++|++..+. ....++||++|++|+|||||+|+|+...
T Consensus 3 ~~~~i~~~~i~~~~~---~~~~~~I~I~dg~I~~ig~~~~~-----~~~~~vid~~g~~v~PG~ID~H~H~~~~------ 68 (438)
T PRK07575 3 MSLLIRNARILLPSG---ELLLGDVLVEDGKIVAIAPEISA-----TAVDTVIDAEGLTLLPGVIDPQVHFREP------ 68 (438)
T ss_pred ceEEEECCEEECCCC---CEEeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEcccEEEeeeccCCC------
Confidence 468999999997532 23567999999999999975321 1135899999999999999999997431
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHHH---HHH-HHcCCeEEEecc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMA---KAV-ELLGLRACLVQS 169 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~~---~~~-~~~g~~~~~~~~ 169 (400)
...+.++.+..+ +.++++|+|++.++.... .+... +.+ ....++..+...
T Consensus 69 -----------------~~~~~e~~~~~~----~aa~~gGvTt~~dmp~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~~~ 127 (438)
T PRK07575 69 -----------------GLEHKEDLFTAS----RACAKGGVTSFLEMPNTKPLTTTQAALDDKLARAAEKCVVNYGFFIG 127 (438)
T ss_pred -----------------CCcCcchHHHHH----HHHHhCCEEEEEECCCCCCCCCcHHHHHHHHHHhccCcEEEEEEEcc
Confidence 011223333333 457899999999986321 22222 221 111222211110
Q ss_pred cc----------cCCCCCCccc--c-cCCchHHHHHHHHHHHHhccCCCCCeEEE--------------eecccc-----
Q 015784 170 TM----------DCGEGLPASW--A-VRTTDDCIQSQKELYAKHHHAADGRIRIW--------------FGIRQI----- 217 (400)
Q Consensus 170 ~~----------~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~----- 217 (400)
.. ....++.... . ..............++.. ...+... .+....
T Consensus 128 ~~~~~l~~l~~~~~~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~h~e~~~l~~~~~~~~~g~~~~~~~~~ 203 (438)
T PRK07575 128 ATPDNLPELLTANPTCGIKIFMGSSHGPLLVDEEAALERIFAEG----TRLIAVHAEDQARIRARRAEFAGISDPADHSQ 203 (438)
T ss_pred ccccCHHHHHHhhCCeEEEEEEeeCCCCcccCcHHHHHHHHHhC----CCEEEEeCcChHHHHhhhHhhccCcCcccccc
Confidence 00 0000000000 0 000000000011111110 0011100 000000
Q ss_pred ccCCH---HHHHHHHHHHHHcCCeeeE-ecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHH
Q 015784 218 MNATD---RLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLL 293 (400)
Q Consensus 218 ~~~~~---e~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~ 293 (400)
...+. +.+.+++++|++.+.++++ |+. +....+.+.+.. ...+.. -++.|..+++++++..
T Consensus 204 ~~p~~aE~~av~~~~~la~~~g~~lhi~HiS-t~~~v~~i~~~k------------~~~vt~-ev~phhL~l~~~~~~~- 268 (438)
T PRK07575 204 IQDEEAALLATRLALKLSKKYQRRLHILHLS-TAIEAELLRQDK------------PSWVTA-EVTPQHLLLNTDAYER- 268 (438)
T ss_pred cCcHHHHHHHHHHHHHHHHHHCCCEEEEECC-CHHHHHHHHHhc------------CCCEEE-EEchhhheeCHHHHhC-
Confidence 01111 4567788888888888888 876 544333332211 011111 2334446667776652
Q ss_pred HhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCC----------CCCH-HHHHHHHHHHhcccccccCC
Q 015784 294 SRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN----------RMSI-VDEMYLASLINKGREVFANG 361 (400)
Q Consensus 294 ~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~----------~~~~-~~~~~~~~~~~~~~~~~~~~ 361 (400)
.+....++|. ++. .++.++.+++++|+.++++|||.|++. ...+ ..++.+...+...
T Consensus 269 --~~~~~k~~PP--LR~~~d~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~l~~l~~~~------- 337 (438)
T PRK07575 269 --IGTLAQMNPP--LRSPEDNEALWQALRDGVIDFIATDHAPHTLEEKAQPYPNSPSGMPGVETSLPLMLTAA------- 337 (438)
T ss_pred --CCceEEEeCC--CCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHccCCcccCCCCcccHHHHHHHHHHHH-------
Confidence 4666677777 565 667889999999999999999987642 1222 3445554444331
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 362 TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 362 ~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++++++|.|||++||+.+ .|+|++|++|
T Consensus 338 --~~~~lsl~~~~~~~s~npAk~lgl~~-~G~L~~G~~A 373 (438)
T PRK07575 338 --MRGKCTVAQVVRWMSTAVARAYGIPN-KGRIAPGYDA 373 (438)
T ss_pred --hcCCCCHHHHHHHHhhhHHHHcCCCC-CCccCCCCcC
Confidence 13459999999999999999999965 4999999987
|
|
| >TIGR01178 ade adenine deaminase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.7e-25 Score=209.91 Aligned_cols=298 Identities=17% Similarity=0.206 Sum_probs=177.6
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++.+. ....++|+|+||+|++|++.. +.++||++|++|+|||||+|+|+..+
T Consensus 1 dlli~n~~ivd~~~~--~~~~~dI~I~~g~I~~ig~~~---------~~~viDa~G~~v~PG~ID~H~Hi~~~------- 62 (552)
T TIGR01178 1 DIVIKNAKIIDVYNG--EIIPGDIAIANGHIAGVGKYN---------GVKVIDALGEYAVPGFIDAHIHIESS------- 62 (552)
T ss_pred CEEEEeeEEEeCCCC--cEEeeeEEEECCEEEEecCCC---------CCeEEECCCCEEEeCeEecccccCCC-------
Confidence 478999999975433 335679999999999998641 35899999999999999999999651
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------CHHHHHHHHHHcCCeEEEecccc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTM 171 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~ 171 (400)
..++++ +. ..++.+|+|++.++... .++.+.+.++...++.+....
T Consensus 63 -----------------~~~~~~-~~------~~al~~GvTtvv~~P~~~~~v~g~~~~~~~~~~a~~~~~d~~~~~~-- 116 (552)
T TIGR01178 63 -----------------MLTPSE-FA------KLVLPHGVTTVVSDPHEIANVNGEDGINFMLNNAKKTPLNFYFMLP-- 116 (552)
T ss_pred -----------------CCChhH-HH------HHHHCCCEEEEEcCCCCCCCCCCHHHHHHHHHHhhcCCcEEEEECC--
Confidence 112222 11 34799999999985422 233445555555565433221
Q ss_pred cCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh
Q 015784 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (400)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (400)
.+.+..+.++.+. .-..++..++++. ..--.++.++........+++.++.+ +.+++.|..+..|+..-...
T Consensus 117 s~vp~~~~e~~g~--~~~~~~i~~~~~~---~~V~glke~m~~~~v~~~d~~~l~~i-~~a~~~g~~I~gHap~l~~~-- 188 (552)
T TIGR01178 117 SCVPALQFETSGA--VLTAEDIDELMEL---DEVLGLAEVMDYPGVINADIEMLNKI-NSARKRNKVIDGHCPGLSGK-- 188 (552)
T ss_pred CCCCCCcccCCCC--ccCHHHHHHHHcC---CCccEEEEEecchhhcCCCHHHHHHH-HHHHhCCCEEEecCCCCCHH--
Confidence 1111111111111 1112233333321 11122444444333334455555544 78899999999998643321
Q ss_pred HHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECcccccc-ccCcccHHHHHHcCCcEEEcC
Q 015784 252 VVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR-MLGFAPIKEMLHADICVSLGT 330 (400)
Q Consensus 252 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~~~Gv~v~~gt 330 (400)
.+..+...| ....|+.. +.++...-.+.|+.+...-.+..+ +....++-.. +.+.+++++|
T Consensus 189 -----------eL~~~~~aG-----i~~dHe~~-s~~ea~e~~~~Gm~~~ir~gs~~~n~~~~~~~~~~-~~~~~~~l~T 250 (552)
T TIGR01178 189 -----------LLNKYISAG-----ISNDHEST-SIEEAREKLRLGMKLMIREGSAAKNLEALHPLINE-KNCRSLMLCT 250 (552)
T ss_pred -----------HHHHHHHcC-----CCCCcCcC-CHHHHHHHHHCCCEEEEeCCccccCHHHHHHHHhh-cCCceEEEEe
Confidence 222223333 23568766 566666666889888765444322 1222222211 3568999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 331 DGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 331 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
|... ..+++.+......+.++. ..++++++|++|+|.|||+++|+++ .|+|++|+.|
T Consensus 251 D~~~---~~~~~~~g~l~~~v~~ai---------~~g~~~~~Al~maT~npA~~lgl~~-~G~I~pG~~A 307 (552)
T TIGR01178 251 DDRH---VNDILNEGHINHIVRRAI---------EHGVDPFDALQMASINPAEHFGIDV-GGLIAPGDPA 307 (552)
T ss_pred CCCC---hhHHHhcCCHHHHHHHHH---------HcCCCHHHHHHHHHHHHHHHcCCCC-CcccCCCCcC
Confidence 9532 233444333322222211 2358999999999999999999986 6999999987
|
The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected. |
| >cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.1e-25 Score=202.98 Aligned_cols=316 Identities=19% Similarity=0.208 Sum_probs=174.6
Q ss_pred CCCCCCCCCC-CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhh--h-----hhhccCCCcEEeCCCcE
Q 015784 6 SGGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI--L-----QQFSQMADQIIDLQSQI 77 (400)
Q Consensus 6 ~~~~~~~~~~-~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~--~-----~~~~~~~~~viD~~g~~ 77 (400)
.|++.++... ....+++|+|++|++.. . +.+++|.|+||+|++|++.... . ......++++||++|++
T Consensus 51 ~g~~~~~~~~~~~~~DlVI~Na~IiD~~---g-i~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~i 126 (567)
T cd00375 51 DGMGQSSGYTREDVLDLVITNALIIDYT---G-IYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKI 126 (567)
T ss_pred cCCCCCCCCCccccCCEEEECeEEECCC---C-cEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCE
Confidence 4555544443 34568999999999743 2 3467999999999999975321 0 01122356899999999
Q ss_pred eeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--c--------
Q 015784 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--G-------- 147 (400)
Q Consensus 78 v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~-------- 147 (400)
|+|||||+|+|+.. +.+ .+.++.+||||+.+++ +
T Consensus 127 V~PG~ID~HvH~~~------------------------P~~------------~~aAlagGVTTvI~~G~gP~~gtnatp 170 (567)
T cd00375 127 VTAGGIDTHVHFIC------------------------PQQ------------IEEALASGITTMIGGGTGPAAGTKATT 170 (567)
T ss_pred EeeceEECccCCCC------------------------ccH------------HHHHHcCCCcEEEcCCcCcccccCCCC
Confidence 99999999999843 100 1458999999999962 1
Q ss_pred -----CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCH
Q 015784 148 -----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222 (400)
Q Consensus 148 -----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
..+..+.+.++...+...+.. .+ ....+.+..+. ... +.+. +..+..+..++
T Consensus 171 ~t~g~~~l~~ml~aa~~~pin~g~~g----kg-----------~~~~l~eL~e~----~~a--GA~G--fK~~eD~g~t~ 227 (567)
T cd00375 171 CTPGPWNIKRMLQAADGLPVNIGFLG----KG-----------NGSSPDALAEQ----IEA--GACG--LKLHEDWGATP 227 (567)
T ss_pred CCCCHHHHHHHHHHhhcCCceEEEEe----cC-----------ccccHHHHHHH----HHc--CCEE--EEecCCCCCCH
Confidence 112333444443333221110 01 00112222222 122 2222 22223345688
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC----hhHHHHHHhcCC
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGV 298 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~----~~~i~~~~~~~~ 298 (400)
..+.++++.|+++++++.+|+..-.+. . .+|. ......+......|..... ++-++.....++
T Consensus 228 ~~i~~aL~~A~~~dv~VaiHadtlne~-g-----------~~E~-t~aa~~gr~iH~~H~egaggghapdi~~~~~~~nv 294 (567)
T cd00375 228 AAIDTCLSVADEYDVQVAIHTDTLNES-G-----------FVED-TIAAIKGRTIHTYHTEGAGGGHAPDIIKVAGHPNV 294 (567)
T ss_pred HHHHHHHHHHHhhCCEEEEECCCCCcc-h-----------HHHH-HHHHhcCCeEEEEecCCCCcccchHHHHhcCCCCc
Confidence 899999999999999999999643321 1 2221 1111122222222322211 222232222233
Q ss_pred eE-EECccc----c-----------------------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCCH-HH
Q 015784 299 KV-SHCPAS----A-----------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSI-VD 343 (400)
Q Consensus 299 ~~-~~~p~~----~-----------------------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~-~~ 343 (400)
.. +..|.- | .|.+.++.-..|.+.|+...++||+...+..... .+
T Consensus 295 lp~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~~fa~srir~~ti~ae~~l~d~G~~s~~~sDs~~mgr~ge~~~r 374 (567)
T cd00375 295 LPSSTNPTRPFTVNTLDEHLDMLMVCHHLDPNIPEDVAFAESRIRAETIAAEDVLHDLGAISIMSSDSQAMGRVGEVILR 374 (567)
T ss_pred ccCCCCCCCCCccCchhhhcCeEEeecCCCCCCcchhhhhhhhccchhhccchhhhccCcEEEEccchhhcCccceeeec
Confidence 21 222210 0 0112333445688999999999998633222222 22
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHH---HHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 344 EMYLASLINKGREVFANGTTDPAALPAETV---LRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a---l~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+.+..+.+.+.... .+....+...+ |+++|.|||+++|+++++|+|++||.|
T Consensus 375 ~~q~a~k~~~~~g~~~---~~~~~~~n~r~~~~L~~~Tin~A~alG~~~~vGSLe~GK~A 431 (567)
T cd00375 375 TWQTAHKMKAQRGPLP---EDSGDADNFRVKRYIAKYTINPAIAHGISHEVGSVEVGKLA 431 (567)
T ss_pred hHHHHHHHHHhcCCCC---cccccCchHHHHHHHHHhhHHHHHHcCcccCceeeCCCCcc
Confidence 2233322222111110 11112455455 999999999999999999999999987
|
Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers. |
| >cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.7e-26 Score=207.64 Aligned_cols=318 Identities=24% Similarity=0.237 Sum_probs=189.9
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++ ....+.+|+|+||+|++|++..+. + ...++||++|++|+|||||+|+|....
T Consensus 1 ~~i~~~~v~~~----~~~~~~~i~i~~g~I~~i~~~~~~----~-~~~~vid~~g~~l~PG~iD~H~H~~~g-------- 63 (374)
T cd00854 1 LIIKNARILTP----GGLEDGAVLVEDGKIVAIGPEDEL----E-EADEIIDLKGQYLVPGFIDIHIHGGGG-------- 63 (374)
T ss_pred CEEEeEEEeCC----CEEcccEEEEECCEEEEecCCCCc----c-cCCcEEECCCCEecccEEEeeecccCC--------
Confidence 47999999974 355788999999999999875432 1 235899999999999999999998541
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-HHHH---HHH---HHHcC--CeEEEecccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEM---AKA---VELLG--LRACLVQSTM 171 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-~~~~---~~~---~~~~g--~~~~~~~~~~ 171 (400)
.++ ...+.++ + ....+.+++.|||++.++.... .+.+ .+. ..+.+ .+. .+++
T Consensus 64 ~~~------------~~~~~e~-~---~~~~~~~~~~GvTtv~~t~~t~~~~~~~~~l~~~~~~~~~~~g~~~---~g~h 124 (374)
T cd00854 64 ADF------------MDGTAEA-L---KTIAEALAKHGTTSFLPTTVTAPPEEIAKALAAIAEAIAEGQGAEI---LGIH 124 (374)
T ss_pred CCC------------CCCCHHH-H---HHHHHHHHccCcceeeccccCCCHHHHHHHHHHHHHHhhcCCCCee---EEEe
Confidence 000 0111121 1 2234678999999999876222 2221 111 11111 222 1234
Q ss_pred cCCCCCCcccccCCchHHHH-HHHHHHHHhccCCCCCeEEEeeccccccCCHHHH--HHHHHHHHHcCCeee-EecCCCc
Q 015784 172 DCGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLL--LETRDMAREFKTGIH-MHVAEIP 247 (400)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l--~~~~~~a~~~~~~v~-~H~~~~~ 247 (400)
..|++++..+.+..+...+. ...+.++++.....+.++++ +++||.. .++++.++++|+.+. .|..-+.
T Consensus 125 leGP~~~~~~~g~h~~~~~~~~~~~~~~~~~~~~~~~ik~~-------tlaPE~~~~~~~i~~~~~~gi~v~~GH~~a~~ 197 (374)
T cd00854 125 LEGPFISPEKKGAHPPEYLRAPDPEELKKWLEAAGGLIKLV-------TLAPELDGALELIRYLVERGIIVSIGHSDATY 197 (374)
T ss_pred eecCccCcccCCCCCHHHcCCcCHHHHHHHHHhcCCCEEEE-------EECCCCCChHHHHHHHHHCCeEEEeeCCcCCH
Confidence 56666665554443332211 12233344433334677765 3445555 788899999999995 8876432
Q ss_pred hhh-hHHhhhcCCCCChHHHHh---------HhCC----CC-C--Ce-eeEEecCCChhHHHHHHhcC--CeEEECcccc
Q 015784 248 YEN-QVVMDTRKVDHGTVTFLD---------KIEF----LQ-N--NL-LSAHTVWVNHTEIGLLSRAG--VKVSHCPASA 307 (400)
Q Consensus 248 ~~~-~~~~~~~~~~~~~~~~l~---------~~~~----~~-~--~~-~~~h~~~~~~~~i~~~~~~~--~~~~~~p~~~ 307 (400)
... +.+.. | ...++++. ..+. +. . -. ++.|+.|+++++++.+.+.. -.+..++.++
T Consensus 198 ~~~~~a~~~--G--~~~~tH~~n~m~~~~~r~~~~~~a~l~~~~~~~~li~dg~Hv~~~~~~~~~r~~g~~~~~lvtD~~ 273 (374)
T cd00854 198 EQAVAAFEA--G--ATHVTHLFNAMSPLHHREPGVVGAALSDDDVYAELIADGIHVHPAAVRLAYRAKGADKIVLVTDAM 273 (374)
T ss_pred HHHHHHHHc--C--CCeeeECCCCCCCcCCCCCcHHHHhhcCCCCeEEEEcCCCcCCHHHHHHHHHhcCCCcEEEEeccc
Confidence 111 21111 1 11111110 0000 11 1 12 67899999999999998874 4577777765
Q ss_pred ccc---cCcccHHHH--HHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHH
Q 015784 308 MRM---LGFAPIKEM--LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGA 382 (400)
Q Consensus 308 ~~~---~~~~~~~~~--~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A 382 (400)
... .+.+++... ...+..+.+.+|.... +..++.+.++.+.... +++++++++++|.|||
T Consensus 274 ~~~G~~~g~y~~~~~~~~~~~~~~~~~~g~laG-~~~~l~~~~~~l~~~~--------------~l~~~~al~~aT~npA 338 (374)
T cd00854 274 AAAGLPDGEYELGGQTVTVKDGVARLADGTLAG-STLTMDQAVRNMVKWG--------------GCPLEEAVRMASLNPA 338 (374)
T ss_pred cccCCCCCeEEECCEEEEEECCEEEcCCCCeee-hHhhHHHHHHHHHHhh--------------CCCHHHHHHHHhHHHH
Confidence 432 234443221 0112233344444333 4466777787765332 4899999999999999
Q ss_pred HHcCCCCCccccccCcCC
Q 015784 383 KSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 383 ~~lg~~~~~G~i~~G~~A 400 (400)
+++|++++.|+|++|+.|
T Consensus 339 ~~lg~~~~~G~i~~G~~A 356 (374)
T cd00854 339 KLLGLDDRKGSLKPGKDA 356 (374)
T ss_pred HHcCCCCCcCCcCCCCcC
Confidence 999999778999999987
|
This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling. |
| >KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.4e-26 Score=201.23 Aligned_cols=342 Identities=14% Similarity=0.170 Sum_probs=214.6
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+.+++|+|++|++-+ .. ...+|+++||.|++|+++..++ .+.++||+.|+.|+||.||.|+|+-.
T Consensus 13 s~rllikgg~vvN~d--~~--~~aDV~vedGiI~~vg~~l~ip-----gg~~~ida~g~~ViPGgID~Hthlq~------ 77 (522)
T KOG2584|consen 13 SNRLLIKGGRVVNDD--QS--FKADVYVEDGIIKEVGENLIIP-----GGVKVIDATGKMVIPGGIDPHTHLQM------ 77 (522)
T ss_pred ccceeeeCCEEEccC--Cc--eeeeEEeccCEEEEecccEEcC-----CCceEEecCCcEEecCccCccceecc------
Confidence 356899999999633 34 4569999999999999986542 36899999999999999999999965
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-CCHHHHHHHHHHcCCeEEEecccccCCCC
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QHVSEMAKAVELLGLRACLVQSTMDCGEG 176 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (400)
|+....+.++++.++ ++++++|+|.+.|+.- ..-..+.++.++..- ..-+..+-+.+..
T Consensus 78 ---------------p~~G~ts~DdF~~GT----kAAlaGGtTmiID~vlp~~~~slv~afe~wr~-~Ad~k~cCDyglh 137 (522)
T KOG2584|consen 78 ---------------PFMGMTSVDDFFQGT----KAALAGGTTMIIDFVLPDKGTSLVEAFEKWRE-WADPKVCCDYGLH 137 (522)
T ss_pred ---------------ccCCccchhhhhccc----HHHhcCCceEEEEEecCCCCchHHHHHHHHHh-hcCCceeeeeeee
Confidence 444666777877777 7899999999999741 111122222222100 0112233333332
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
..-.| |...+.+..+.+.+ ..+...++++++....+.+++++|.++++.+++.|....+|+...+...+..+.+
T Consensus 138 v~It~----W~~~v~eem~~l~~--ekGvnsF~~fmayk~~~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~q~~~ 211 (522)
T KOG2584|consen 138 VGITW----WSPSVKEEMEILVK--EKGVNSFKFFMAYKDLYMVRDSELYEALKVCAELGALAMVHAENGDAIAEGQQRL 211 (522)
T ss_pred Eeeee----cCcchHHHHHHHhh--hcCcceEEeeeeeccccccCHHHHHHHHHHHhhcchhheehhhcchhhhhhhhHH
Confidence 22211 22334444444442 3344567788899999999999999999999999999999997665544333322
Q ss_pred cCCCC---------C-------hH-HHHhHhCCCCCCeeeEEecCCChhH-HHHHHhcCCeEEECccccc----------
Q 015784 257 RKVDH---------G-------TV-TFLDKIEFLQNNLLSAHTVWVNHTE-IGLLSRAGVKVSHCPASAM---------- 308 (400)
Q Consensus 257 ~~~~~---------~-------~~-~~l~~~~~~~~~~~~~h~~~~~~~~-i~~~~~~~~~~~~~p~~~~---------- 308 (400)
...+- + .+ +.+.-....+.+..++|..+.+..+ |...+++|..+.-.|..+.
T Consensus 212 l~~gitgPEgh~lSRPee~EaEA~~rai~ia~~~ncPlyvvhVmsksaa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~ 291 (522)
T KOG2584|consen 212 LELGITGPEGHELSRPEELEAEATNRAITIARQANCPLYVVHVMSKSAADAIALARKKGRVVFGEPITASLGTDGSHYWS 291 (522)
T ss_pred HHcCCcCcccccccCchhhhHHHHHHHHHHHHhcCCCcceEEEeehhHHHHHHHHHhcCceeecccchhhhcccchhhcc
Confidence 21100 0 11 2233334455677889998876554 5555554554444443211
Q ss_pred -------ccc----------CcccHHHHHHcCCcEEEcCCCCCCCCC------CCHHHHHHHHHHHhcccccccCCCCCC
Q 015784 309 -------RML----------GFAPIKEMLHADICVSLGTDGAPSNNR------MSIVDEMYLASLINKGREVFANGTTDP 365 (400)
Q Consensus 309 -------~~~----------~~~~~~~~~~~Gv~v~~gtD~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (400)
++. ...-+..++..|..-..||||.+++.. -|+......-.-+.-..++.++.....
T Consensus 292 ~~w~~Aa~~v~sPPlr~d~~t~~~L~~lLa~g~L~~tgSdhctf~~~qKalgKddFt~ip~GvnGvedrMsviwekgv~~ 371 (522)
T KOG2584|consen 292 KDWDHAAAFVTSPPLRPDPTTPDGLMDLLAEGDLQLTGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRMSVIWEKGVHS 371 (522)
T ss_pred CChhhcceeeeCCCCCCCCCCHHHHHHHHhcCccceeecCCCCCCHHHHhhccCccccCCCccccccccceeeeehhccc
Confidence 000 111245678899999999999876320 011100000000000011222223445
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 366 AALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 366 ~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+++.+.+.-.++|+|+++++..|+|+|++|.+|
T Consensus 372 G~md~~~fVavtstnaAkifnlYprKGrIavGsDA 406 (522)
T KOG2584|consen 372 GKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDA 406 (522)
T ss_pred CccCcccEEEEecccchhheeccCcCceecccCCC
Confidence 66889999999999999999999999999999987
|
|
| >PRK13308 ureC urease subunit alpha; Reviewed | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-24 Score=200.51 Aligned_cols=311 Identities=19% Similarity=0.219 Sum_probs=174.3
Q ss_pred CCCCCCCCCCC--CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhh--hhh-----hccCCCcEEeCCC
Q 015784 5 SSGGGSSSGSL--GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI--LQQ-----FSQMADQIIDLQS 75 (400)
Q Consensus 5 ~~~~~~~~~~~--~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~--~~~-----~~~~~~~viD~~g 75 (400)
+.|++.++... ....+++|+|++|+++.. . +.+++|.|+||+|++|++.... ... ....++++||++|
T Consensus 52 r~g~~~~~~~~~~~~~~DlVItNa~IIDp~~--G-i~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG 128 (569)
T PRK13308 52 RDGMGMAPGVTSADGALDFVLCNVTVIDPVL--G-IVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEG 128 (569)
T ss_pred ccCCCCCCCCCCccCcCCEEEECeEEEcCCC--C-eEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCC
Confidence 34555544333 245689999999997432 2 3578999999999999975321 000 0113568999999
Q ss_pred cEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--c------
Q 015784 76 QILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--G------ 147 (400)
Q Consensus 76 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~------ 147 (400)
++|+|||||+|+|+.. .. . .+.++.+||||+.+++ +
T Consensus 129 ~IVtPG~ID~HVH~~~------------------------Pg------~------~~aALagGVTTVi~gg~gPt~p~~t 172 (569)
T PRK13308 129 LIATPGAIDVHVHFDS------------------------AQ------L------VDHALASGITTMLGGGLGPTVGIDS 172 (569)
T ss_pred CEEEeCEEEeeeCCCC------------------------cc------H------HHHHHcCCCcEEecCCcCCCCCCCC
Confidence 9999999999999843 10 0 0458999999999852 1
Q ss_pred CC---HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHH
Q 015784 148 QH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRL 224 (400)
Q Consensus 148 ~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 224 (400)
.. +..+.+.++...+.... +..+ ......+..+. ...+...++ .+..+..+++.
T Consensus 173 ~g~~~i~~~l~aa~~~pvN~g~----~gkG-----------~~s~~aeL~el----i~aGA~GfK----i~ed~g~t~~~ 229 (569)
T PRK13308 173 GGPFNTGRMLQAAEAWPVNFGF----LGRG-----------NSSKPAALIEQ----VEAGACGLK----IHEDWGAMPAA 229 (569)
T ss_pred CCHHHHHHHHHHHhcCCccEEE----EcCC-----------cccCHHHHHHH----HHCCCCEEe----ecCCCCCCHHH
Confidence 11 23334444332222211 1011 00112222222 222212222 22333557889
Q ss_pred HHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC----ChhHHHHHHhcCCeE
Q 015784 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV----NHTEIGLLSRAGVKV 300 (400)
Q Consensus 225 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~----~~~~i~~~~~~~~~~ 300 (400)
+..+++.|+++++++.+|+..-.+. . .+|. ......+...-+.|.... .++-++.....++..
T Consensus 230 i~~aL~~A~~~dv~VaiHadtlne~-g-----------~~E~-t~~a~~gr~iH~~H~egaggghapd~l~~~~~~n~lp 296 (569)
T PRK13308 230 IDTCLEVADEYDFQVQLHTDTLNES-G-----------FVED-TLAAIGGRTIHMYHTEGAGGGHAPDIIRVVGEPHCLP 296 (569)
T ss_pred HHHHHHHHHhcCCEEEEeCCCcCcc-h-----------HHHH-HHHHhcCCeEEEEeccCCccCchhHHHHHhCCCCccC
Confidence 9999999999999999999753321 1 2221 111111222222332221 123333333334332
Q ss_pred -EECccc----c-----------------------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHH
Q 015784 301 -SHCPAS----A-----------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMY 346 (400)
Q Consensus 301 -~~~p~~----~-----------------------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~ 346 (400)
+..|.- | .|.+.++.-..|.+.|+...++||+...+ -+...++
T Consensus 297 ~stnpt~p~t~nt~~e~~dm~m~~h~l~~~~~~d~afa~srir~~ti~ae~~l~d~g~~s~~~sds~~mg---r~~e~i~ 373 (569)
T PRK13308 297 SSTNPTNPYTVNTFDEHLDMTMVCHHLNPDVPEDVAFAESRIRAQTIAAEDVLHDIGAISMLGSDSQGMG---RIAEVIA 373 (569)
T ss_pred CCCCCCCCCccCchhhhcCeEEEecCCCCCCcchhhhhhhhccceeeccCchhhcCCcEEEEecchHHHh---HHHHHHH
Confidence 222220 0 01122333355889999999999987442 1334443
Q ss_pred HHH-HHhcccccccCCCCCCCCCCHHH-----------HHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 347 LAS-LINKGREVFANGTTDPAALPAET-----------VLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 347 ~~~-~~~~~~~~~~~~~~~~~~l~~~~-----------al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
... ...++.. +...++.++ +|+++|.|||+++|+++++|+|++||.|
T Consensus 374 r~~q~a~~~~~-------~~g~l~~~~~~~~dn~rv~r~L~~~T~npA~alGi~~~vGsLe~Gk~A 432 (569)
T PRK13308 374 RTWQLASKMKD-------QRGPLPEDRGTFADNARIKRYIAKYTINPAITFGIDDHIGSLEPGKLA 432 (569)
T ss_pred HHHHHHHHHhh-------cCCCCCcccccCCchhhhhHHHHHHhHHHHHHcCCCCCceeeCCCCcC
Confidence 322 2222221 122244443 6999999999999999989999999987
|
|
| >COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.7e-25 Score=196.51 Aligned_cols=321 Identities=19% Similarity=0.242 Sum_probs=194.2
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
.+|+|++|+++. .++.++.+.|+||+|.+|.+ .+. | .+.+++|.+|.+|+|||||+|+|... +
T Consensus 2 ~~~~~~~i~t~~---~~~~~~~v~i~dg~I~~i~~-~~~----p-~~~e~id~~G~~l~PGfID~hihG~g--------G 64 (380)
T COG1820 2 YALKNGRIFTGH---GVLDGGAVVIEDGKIEAVVP-AEL----P-ADAEIIDLKGALLVPGFIDLHIHGGG--------G 64 (380)
T ss_pred ceeeccEEEcCc---ceEECcEEEEcCCEEEEEec-CcC----C-CcceeecCCCCEecccEEEEeecCcC--------c
Confidence 478999999864 57888899999999999998 332 2 36799999999999999999999976 1
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cCCHHHH-------HHHHHHcCCeEEEeccccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQHVSEM-------AKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~~~~~~-------~~~~~~~g~~~~~~~~~~~ 172 (400)
.++ .+.........-++..++.|+|++.... ....+.+ .+.... ......+++-
T Consensus 65 ~~~---------------~D~~~~~~l~~i~~~~~~~GtTsfLpT~iT~~~e~i~~al~~~~e~~~~---~ga~ilGiHL 126 (380)
T COG1820 65 ADF---------------MDAGSVETLETMAEAHLRHGTTSFLPTLITASLEKIKAALRAIREAIAK---GGAQILGIHL 126 (380)
T ss_pred ccc---------------cCccCHHHHHHHHHHhhhcCeeeeeeecccCCHHHHHHHHHHHHHHHhc---cCCceEEEEe
Confidence 111 1101111222244668889999999732 2222222 222221 1112245677
Q ss_pred CCCCCCcccccCCchHHHH-HHHHHHHHhccCCCCCeEEE-eeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+||++++.+.+.++...+. ...+.++.+....++.++.+ +.|. ..-+ .++++.+.+.|+.+.+-..+...+
T Consensus 127 EGP~ls~~kkGAh~~~~ir~~~~~~~~~~~~~a~g~i~~vTlAPE--~~~~----~e~i~~l~~~giivs~GHS~Atye- 199 (380)
T COG1820 127 EGPFLSPEKKGAHNPEYIRPPDPEELEQLIAAADGLIKLVTLAPE--LDGT----KELIRLLANAGIVVSIGHSNATYE- 199 (380)
T ss_pred ecCccCHhhccCCCHHHhCCCCHHHHHHHHhhccCceEEEEECCC--CCCC----HHHHHHHHhCCeEEEecCccccHH-
Confidence 8999999999998887765 55566777777666544432 2221 1112 344455566666655443333222
Q ss_pred hHHhhhcCCCCChH-HHH--------hHhCCCCC--------CeeeEEecCCChhHHHHHHhcC----CeEEECcccccc
Q 015784 251 QVVMDTRKVDHGTV-TFL--------DKIEFLQN--------NLLSAHTVWVNHTEIGLLSRAG----VKVSHCPASAMR 309 (400)
Q Consensus 251 ~~~~~~~~~~~~~~-~~l--------~~~~~~~~--------~~~~~h~~~~~~~~i~~~~~~~----~~~~~~p~~~~~ 309 (400)
...+.+..+...+ ..+ ++.|+.+. --+|..+.|+.+..++.+.+.. +.++.--....-
T Consensus 200 -~~~~a~~~Ga~~~THlfNaMs~l~hREPGvvGA~L~~~~~~~eiIaDG~HVhP~~~~ia~~~kg~~~i~LVTDam~a~G 278 (380)
T COG1820 200 -QARAAFEAGATFVTHLFNAMSGLHHREPGVVGAALDNPDVYAEIIADGVHVHPAAIRLALKAKGGDKIVLVTDAMAAAG 278 (380)
T ss_pred -HHHHHHHhCccEEEeeccCCCCCCCCCCcccceeecCCCeEEEEEccCcccCHHHHHHHHhccCCceEEEEEccccccC
Confidence 1211111111111 111 22232221 1267788899999988877754 222221111111
Q ss_pred c-cCcccHHH---HHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 310 M-LGFAPIKE---MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 310 ~-~~~~~~~~---~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
+ .+.+.+.- -.+.| .+.-.|+...++.+++...++....+. +++++||++|+|.+||++|
T Consensus 279 ~~dg~y~lgg~~V~v~~g--~~~~~~GtLAGS~Ltm~~avrn~v~~~--------------~~~~~eAv~maS~~PA~~l 342 (380)
T COG1820 279 LPDGEYILGGQTVTVADG--ARRLEDGTLAGSTLTMDEAVRNLVEWG--------------GISLAEAVRMASLNPAKAL 342 (380)
T ss_pred CCCccEEECCEEEEEECC--EEECCCCceeeeeeeHHHHHHHHHHHh--------------CCCHHHHHHHhhhhHHHHh
Confidence 1 12221110 11223 444455554456788888888877554 4899999999999999999
Q ss_pred CCCCCccccccCcCC
Q 015784 386 LWDNDIGSLEAGKKV 400 (400)
Q Consensus 386 g~~~~~G~i~~G~~A 400 (400)
|+++++|+|++||+|
T Consensus 343 gl~~~~G~i~~G~~A 357 (380)
T COG1820 343 GLDDRLGSIKPGKDA 357 (380)
T ss_pred CCcCcccccCCCccc
Confidence 999999999999987
|
|
| >PRK07369 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.3e-24 Score=196.94 Aligned_cols=320 Identities=15% Similarity=0.120 Sum_probs=178.5
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+.+++|+|++|+++.+. ....++|+|+||+|++|++.... +..+.++||++|++|+|||||+|+|+...
T Consensus 1 ~~~~~i~n~~v~d~~~~--~~~~~~v~I~dg~I~~i~~~~~~----~~~~~~~iDa~G~~vlPG~ID~H~H~~~~----- 69 (418)
T PRK07369 1 MSNELLQQVRVLDPVSN--TDRIADVLIEDGKIQAIEPHIDP----IPPDTQIIDASGLILGPGLVDLYSHSGEP----- 69 (418)
T ss_pred CCCEEEeCeEEECCCCC--cccceeEEEECCEEEEecCCccc----CCCCCEEEECCCCEEecCEEecccccCCC-----
Confidence 45789999999964332 23668999999999999864321 11246899999999999999999998541
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHH---HHHHHHcC-CeEEEec
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEM---AKAVELLG-LRACLVQ 168 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~---~~~~~~~g-~~~~~~~ 168 (400)
.....++.... .+.++++|+|++.+++... .+.. .+.++... +...+..
T Consensus 70 ------------------~~~~~e~~~s~----~~aa~~GGvTtv~~~pn~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~ 127 (418)
T PRK07369 70 ------------------GFEERETLASL----AAAAAAGGFTRVAILPDTFPPLDNPATLARLQQQAQQIPPVQLHFWG 127 (418)
T ss_pred ------------------CcCCCccHHHH----HHHHHhCCceEEEECCCCCCCCCCHHHHHHHHHHhcccCceeEEEEE
Confidence 11112232222 2678999999999986321 2222 12221111 1121111
Q ss_pred ccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCch
Q 015784 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (400)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~ 248 (400)
.. ..+ .....+.+..++. .. +. ..+. ......+...+.++++.+++.|.++.+|+.+...
T Consensus 128 ~~-~~~----------~~~~~~~ei~~l~----~~--Gv-~~f~--~~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l 187 (418)
T PRK07369 128 AL-TLG----------GQGKQLTELAELA----AA--GV-VGFT--DGQPLENLALLRRLLEYLKPLGKPVALWPCDRSL 187 (418)
T ss_pred EE-eeC----------CCCccHhhHHHHH----HC--CC-EEEE--CCCcCCCHHHHHHHHHHHHhcCCeEEEecCChhh
Confidence 11 110 0001122222221 11 22 2222 1222345668889999999999999999965443
Q ss_pred hhhHHh------hhcC-CCCC------hH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECcccccc--
Q 015784 249 ENQVVM------DTRK-VDHG------TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAMR-- 309 (400)
Q Consensus 249 ~~~~~~------~~~~-~~~~------~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~~-- 309 (400)
....+. ...+ ..+- .+ +.+......+.+..+.|...-. -+.++.+++.| +.+.+||...+-
T Consensus 188 ~~~~~~~~g~~~~~~~~~~~p~~aE~~av~r~~~la~~~~~~~hi~HvSs~~~~~~i~~ak~~g~~vt~Ev~phhL~l~~ 267 (418)
T PRK07369 188 AGNGVMREGLLALRLGLPGDPASAETTALAALLELVAAIGTPVHLMRISTARSVELIAQAKARGLPITASTTWMHLLLDT 267 (418)
T ss_pred hhcCcccCChhHHHhCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEEecHHHHhccH
Confidence 110000 0000 0000 11 1222222334566666665522 23455556665 556788874220
Q ss_pred ---------------c---cCcccHHHHHHcCCcEEEcCCCCCCCCC---CCHH--------HHHHHHHHHhcccccccC
Q 015784 310 ---------------M---LGFAPIKEMLHADICVSLGTDGAPSNNR---MSIV--------DEMYLASLINKGREVFAN 360 (400)
Q Consensus 310 ---------------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~ 360 (400)
+ .....+.+.+..|....++|||.|.... .+++ -+..+...+...
T Consensus 268 ~~~~~~~~~~kv~PPLR~~~d~~aL~~~l~~G~Id~i~SDHaP~~~~~K~~~~~~~~~G~~G~e~~l~~~~~~~------ 341 (418)
T PRK07369 268 EALASYDPNLRLDPPLGNPSDRQALIEGVRTGVIDAIAIDHAPYTYEEKTVAFAEAPPGAIGLELALPLLWQNL------ 341 (418)
T ss_pred HHHhccCCCcEECCCCCCHHHHHHHHHHHhcCCCCEEEcCCCCCCHHHccCCHhHCCCCceeHHHHHHHHHHHH------
Confidence 0 0112345567789999999999876210 0111 111111111110
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 361 ~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||++||+. .|+|++|++|
T Consensus 342 --v~~~~i~l~~~v~~~s~nPA~~lgl~--~G~i~~G~~A 377 (418)
T PRK07369 342 --VETGELSALQLWQALSTNPARCLGQE--PPSLAPGQPA 377 (418)
T ss_pred --HHcCCCCHHHHHHHHHHhHHHHhCCC--cCcccCCCcC
Confidence 11345999999999999999999996 3999999986
|
|
| >PRK02382 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-23 Score=197.77 Aligned_cols=317 Identities=18% Similarity=0.188 Sum_probs=176.3
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|++.+ . +.+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 2 ~dl~i~n~~v~~~~---~-~~~~~v~I~dg~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~ID~H~H~~~~g----- 67 (443)
T PRK02382 2 RDALLKDGRVYYNN---S-LQPRDVRIDGGKITAVGKDLDG-----SSSEEVIDARGMLLLPGGIDVHVHFREPG----- 67 (443)
T ss_pred ceEEEECCEEEeCC---C-ceEEEEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEcCCEeeeeeeccCCC-----
Confidence 47899999999732 2 3568999999999999864321 12468999999999999999999985410
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHHHHHHHHcCCeEEEecccccC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDC 173 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~ 173 (400)
....++.. .....++.+|||++.+++... .+..........-+........ .
T Consensus 68 ------------------~~~~e~~~----~~~~aa~~gGvTtv~~~~~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~-~ 124 (443)
T PRK02382 68 ------------------YTHKETWY----TGSRSAAAGGVTTVVDQPNTDPPTVDGESFDEKAELAARKSIVDFGIN-G 124 (443)
T ss_pred ------------------CCchhhHH----HHHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCceEEEEEE-e
Confidence 00111211 133668999999999985321 1122221222111111111111 0
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCe-EEEeec-cccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI-RIWFGI-RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (400)
+ . .........+.+ .+...+ +++... ......+++.+.++++.+++.|+++.+|+.+......
T Consensus 125 ~---~--------~~~~~~l~~l~~----~gv~~~gkv~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~ 189 (443)
T PRK02382 125 G---V--------TGNWDPLESLWE----RGVFALGEIFMADSTGGMGIDEELFEEALAEAARLGVLATVHAEDEDLFDE 189 (443)
T ss_pred e---e--------ccchhhHHHHHh----cCccceeEEEEEecCCCcccCHHHHHHHHHHHHhcCCeEEEecCCHHHHHH
Confidence 0 0 001112222221 111112 333321 1223557788999999999999999999965432111
Q ss_pred HHhh--------hcCCCCC------hH-HHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccc--------
Q 015784 252 VVMD--------TRKVDHG------TV-TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM-------- 308 (400)
Q Consensus 252 ~~~~--------~~~~~~~------~~-~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~-------- 308 (400)
.... .+...+- .+ +.+......+.+..+.|... .+.++.+++..+.+.+||...+
T Consensus 190 ~~~~~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~g~~~hi~h~ss--~~~~~~i~~~~vt~ev~ph~L~l~~~~~~~ 267 (443)
T PRK02382 190 LAKLLKGDADADAWSAYRPAAAEAAAVERALEVASETGARIHIAHIST--PEGVDAARREGITCEVTPHHLFLSRRDWER 267 (443)
T ss_pred hhHhhcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHhCCCEEEEECCC--HHHHHHHHHCCcEEEEchhhhhcCHHHHhc
Confidence 1100 0000000 11 12222222333444444433 4556666666677888888421
Q ss_pred ---cccCcccH---------HHHHHcCCcEEEcCCCCCCCC------------CCCHHHHHHHHHHHhcccccccCCCCC
Q 015784 309 ---RMLGFAPI---------KEMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVFANGTTD 364 (400)
Q Consensus 309 ---~~~~~~~~---------~~~~~~Gv~v~~gtD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (400)
...-.+|+ .+.++.|...+++|||.|... +..-. +......+.. ..
T Consensus 268 ~~~~~k~~PPlr~~~d~~aL~~~l~~g~i~~i~sDh~P~~~~~K~~~~~~~~~G~~g~-e~~~~~~~~~---------~~ 337 (443)
T PRK02382 268 LGTFGKMNPPLRSEKRREALWERLNDGTIDVVASDHAPHTREEKDADIWDAPSGVPGV-ETMLPLLLAA---------VR 337 (443)
T ss_pred cCceEEEcCCCCChHHHHHHHHHHhCCCCCEEEcCCCCCCHHHhcCChhhCCCCcccH-HHHHHHHHHH---------HH
Confidence 00011233 334667999999999987521 11001 1111111110 12
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 365 ~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+++++++++++|.|||+++|+++ .|+|++|+.|
T Consensus 338 ~~~~~l~~~~~~~t~~pA~~~g~~~-~G~l~~G~~A 372 (443)
T PRK02382 338 KNRLPLERVRDVTAANPARIFGLDG-KGRIAEGYDA 372 (443)
T ss_pred cCCCCHHHHHHHHhHHHHHHcCCCC-CCccCCCCcC
Confidence 3459999999999999999999974 6999999987
|
|
| >TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.3e-24 Score=194.88 Aligned_cols=325 Identities=18% Similarity=0.226 Sum_probs=190.2
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|++++ ....+++|+|+||+|++|++..+.+ ...++||++|++|+|||||+|+|...
T Consensus 3 ~~~~i~n~~i~~~~---~~~~~~~i~V~dGkI~~I~~~~~~~-----~~~~viD~~G~~i~PGfID~HvHg~~------- 67 (380)
T TIGR00221 3 ESYLLKDIAIVTGN---EVIDNGAVGINDGKISTVSTEAELE-----PEIKEIDLPGNVLTPGFIDIHIHGCG------- 67 (380)
T ss_pred ceEEEEeeEEECCC---CEEeccEEEEECCEEEEEcccccCC-----CCCeEEECCCCEEccceeeeeecccc-------
Confidence 35899999999853 3556789999999999998754321 24589999999999999999999854
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-HHH---HHHHHHH-c-CCeEEEeccccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSE---MAKAVEL-L-GLRACLVQSTMD 172 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-~~~---~~~~~~~-~-g~~~~~~~~~~~ 172 (400)
+.++ ...+.++. ...++.+++.|||++.++.... .+. ..+...+ . ......-.+++-
T Consensus 68 -g~~~------------~~~~~e~~----~~~~~~~~~~GvTt~l~t~~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~Hl 130 (380)
T TIGR00221 68 -GVDT------------NDASFETL----EIMSERLPKSGCTSFLPTLITQPDENIKQAVKNMREYLAKEKNAQALGLHL 130 (380)
T ss_pred -CcCC------------CCCCHHHH----HHHHHHHHhcCeeEEeeeccCCCHHHHHHHHHHHHHHHhccCCceeeeEee
Confidence 1110 01122222 2234678899999999864222 221 1222211 1 111222355677
Q ss_pred CCCCCCcccccCCchHHHH-HHHHHHHHhccCCCCCeEEEe-eccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWF-GIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+|+++++.+.+.++.+.+. ...+.++++.....+.++.+. .|. .. --.++++.+.++|+.+.+-......
T Consensus 131 EGPfi~~~~~Gah~~~~i~~p~~~~~~~~~~~~~~~i~~vTlAPE--~~----~~~~~i~~l~~~gi~vs~GHs~A~~-- 202 (380)
T TIGR00221 131 EGPFLSPEKKGAHPPEYIREPDVELFKKFLCEAGGVITKVTLAPE--ED----QHFELIRHLKDAGIIVSAGHTNATY-- 202 (380)
T ss_pred ecCcCChhhcCCCCHHHhhCcCHHHHHHHHHhcCCCEEEEEECCC--CC----ChHHHHHHHHHCCeEEEeeCCCCCH--
Confidence 8888999888888887766 444556666655556677542 221 11 1346667778888887643322222
Q ss_pred hHHhhhcC------------------CCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhc-CC-eEE-ECcc-ccc
Q 015784 251 QVVMDTRK------------------VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA-GV-KVS-HCPA-SAM 308 (400)
Q Consensus 251 ~~~~~~~~------------------~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~-~~-~~~-~~p~-~~~ 308 (400)
+...+.+. +..+.+.......-+ .--+|..+.|+.++.++.+.+. |. ++. ++-. ...
T Consensus 203 ~~~~~a~~~Ga~~~THlfNaM~~~~hR~pg~vga~l~~~~~-~~elI~Dg~Hv~p~~~~~~~r~kg~~~~~lvtDa~~~~ 281 (380)
T TIGR00221 203 ELAKAAFKAGATHATHLYNAMSPIHHREPGVIGAVLDHDDV-YTEIIADGIHIHPLNIRLAKKLKGDSKLCLVTDSMAAA 281 (380)
T ss_pred HHHHHHHHcCCCeeeeeccCCCCcCCCCCcHHHHHhcCCCc-EEEEEcCCCcCCHHHHHHHHHhcCCCcEEEEecccccc
Confidence 22222111 111222211111100 0135677889999998888665 32 222 2111 111
Q ss_pred cc-cCcccHHH---HHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 015784 309 RM-LGFAPIKE---MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (400)
Q Consensus 309 ~~-~~~~~~~~---~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~ 384 (400)
-+ .+.+.+.. ..+.|. +.-.|..-.++..++.++++..... .+++++++++++|.|||++
T Consensus 282 g~~~G~y~l~~~~v~~~~g~--~~~~~g~LAGs~ltl~~~v~~l~~~--------------~~~~~~eal~~aT~npA~~ 345 (380)
T TIGR00221 282 GAKDGVFIFGGKTVYIREGT--CLDSNGTLAGSSLTMIEGARNLVEF--------------TNISLTDAARMSSLNPARA 345 (380)
T ss_pred CCCCceEeECCEEEEEECCE--EEcCCCceechhhhHHHHHHHHHHh--------------hCCCHHHHHHHHhHHHHHH
Confidence 11 22222110 112221 1113433333557788888876533 2489999999999999999
Q ss_pred cCCCCCccccccCcCC
Q 015784 385 VLWDNDIGSLEAGKKV 400 (400)
Q Consensus 385 lg~~~~~G~i~~G~~A 400 (400)
+|+++++|+|++|+.|
T Consensus 346 lgl~~~~G~i~~G~~A 361 (380)
T TIGR00221 346 LGIDDRLGSVTVGKDA 361 (380)
T ss_pred hCCCCCCcccCCCCcC
Confidence 9998778999999987
|
|
| >cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=99.93 E-value=6.2e-24 Score=193.73 Aligned_cols=288 Identities=17% Similarity=0.167 Sum_probs=168.3
Q ss_pred eEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChh
Q 015784 42 GVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEE 121 (400)
Q Consensus 42 ~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (400)
+|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+...... .. +
T Consensus 1 ~i~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g~~--------------------~~---~ 52 (338)
T cd01307 1 DVAIENGKIAAVGAALAA-----PAATQIVDAGGCYVSPGWIDLHVHVYQGGTR--------------------YG---D 52 (338)
T ss_pred CEEEECCEEEEccCCCCC-----CCCCeEEECCCCEEecCeEEeeecCCCCCcc--------------------cC---C
Confidence 489999999999985321 1246899999999999999999999652110 00 0
Q ss_pred hHHHHHHHHHHHHHhcCcceeeccCcC---CHHHHHHHH-HHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHH
Q 015784 122 DSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKAV-ELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (400)
Q Consensus 122 ~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
. ..+.++++|+||+.+++.. ......+.. ...+.+......+...+...+..+ ........+...+.+
T Consensus 53 ~-------~~~~a~~~GvTtvvd~~~~~~~~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~-~~~~~~~~~~l~~~~ 124 (338)
T cd01307 53 R-------PDMIGVKSGVTTVVDAGSAGADNIDGFRYTVIERSATRVYAFLNISRVGLVAQDEL-PDPDNIDEDAVVAAA 124 (338)
T ss_pred C-------HhHHHHcCceeEEEeCCCCCCCCHHHHHHHHHHhhhceEEEEEeeecccccccccc-CChhHCCHHHHHHHH
Confidence 0 2245889999999997632 233322222 344443222111111121111111 111111122333333
Q ss_pred HHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCe
Q 015784 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL 277 (400)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 277 (400)
.+....- ..++..+..+.........++..++.+++.|+++.+|+.+.......+. ... ....
T Consensus 125 ~e~~~gi-~gik~~~~~~~~~~~~~~~l~~~~~~a~~~~~pi~vH~~~~~~~~~~~~-------------~~l---~~g~ 187 (338)
T cd01307 125 REYPDVI-VGLKARASKSVVGEWGIKPLELAKKIAKEADLPLMVHIGSPPPILDEVV-------------PLL---RRGD 187 (338)
T ss_pred HHCcCcE-EEEEEEeecccccccCCcHHHHHHHHHHHcCCCEEEEeCCCCCCHHHHH-------------HHh---cCCC
Confidence 2222211 1244444333322223334888999999999999999987765433222 211 2224
Q ss_pred eeEEecCCCh-----------hHHHHHHhcCCeEEECccccccccCcccHHHHHHcCC-cEEEcCCCCCCC----CCCCH
Q 015784 278 LSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADI-CVSLGTDGAPSN----NRMSI 341 (400)
Q Consensus 278 ~~~h~~~~~~-----------~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~Gv-~v~~gtD~~~~~----~~~~~ 341 (400)
.+.|+...+. +.++.+.+.|+.+.+..... .....+.++++++|+ +..++||.+..+ +...+
T Consensus 188 ~~~H~~~g~~~~~~~~~~~~~~~~~~~~~~G~~~d~~~G~~--~~~~~~~~~l~~~G~~~~~lstD~~~~~~~~~p~~~l 265 (338)
T cd01307 188 VLTHCFNGKPNGIVDEEGEVLPLVRRARERGVIFDVGHGTA--SFSFRVARAAIAAGLLPDTISSDIHGRNRTNGPVYAL 265 (338)
T ss_pred EEEeccCCCCCCCCCCCCcHHHHHHHHHhCCEEEEeCCCCC--chhHHHHHHHHHCCCCCeeecCCccccCCCCCccccH
Confidence 5778887543 56788888898876542110 011234677889996 678999985321 11222
Q ss_pred HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 342 VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
...++... ..+++++++++++|.|||++||+. ++|+|++|+.|
T Consensus 266 ~~~l~~l~---------------~~gi~~ee~~~~~T~NpA~~lgl~-~~G~l~~G~~a 308 (338)
T cd01307 266 ATTLSKLL---------------ALGMPLEEVIEAVTANPARMLGLA-EIGTLAVGYDA 308 (338)
T ss_pred HHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHcCCC-CCCccCCCCcC
Confidence 23333321 235999999999999999999994 58999999986
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. |
| >cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.6e-23 Score=193.70 Aligned_cols=311 Identities=19% Similarity=0.232 Sum_probs=176.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++. ..+++|+|+||+|++|++..+.+. ..+.++||++|++|+|||||+|+|+......
T Consensus 2 ~~i~~~~v~~~~~----~~~~~v~i~~g~I~~v~~~~~~~~---~~~~~~id~~g~~v~PG~id~H~H~~~~~~~----- 69 (387)
T cd01308 2 TLIKNAEVYAPEY----LGKKDILIAGGKILAIEDQLNLPG---YENVTVVDLHGKILVPGFIDQHVHIIGGGGE----- 69 (387)
T ss_pred EEEECcEEeCCCC----ccceEEEEECCEEEEEeCCccccc---CCCCeEEECCCCEEccCeeehhhCcccccCC-----
Confidence 5899999998542 367899999999999998653221 1246899999999999999999999641000
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-----CCHH---HHHHHHHHcCCeEEEeccccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QHVS---EMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-----~~~~---~~~~~~~~~g~~~~~~~~~~~ 172 (400)
... ...+.+ ..+.+++++|+||+.++.. ...+ ...+.+.+.|++.+.....+.
T Consensus 70 ~~~------------~~~~~~-------~~~~~~~~~G~tt~~d~~~~~~~~~~~~~~~~~~~~~~~~Gv~~v~~~~~~~ 130 (387)
T cd01308 70 GGP------------STRTPE-------VTLSDLTTAGVTTVVGCLGTDGISRSMEDLLAKARALEEEGITCFVYTGSYE 130 (387)
T ss_pred Ccc------------cccCHH-------HHHHHHHhCCceEEecCcCCCCCCCCHHHHHHHHHHHHHhCCEEEEEecccC
Confidence 000 001111 1234678999999999762 1223 345566778999987655433
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCC------eeeEecCCC
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHVAEI 246 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~------~v~~H~~~~ 246 (400)
. +.. .....+......++.+.. .+ ..............+.+.++++.++..+. .+++|..+.
T Consensus 131 ~----~~~----~~~~~~~~~~~~i~~~~~--~g--~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vh~~~~ 198 (387)
T cd01308 131 V----PTR----TITGSIRKDLLLIDKVIG--VG--EIAISDHRSSQPTVEELARIAAEARVGGLLGGKAGIVHIHLGDG 198 (387)
T ss_pred C----CCc----CchhhHHHHHHHHHHhcC--cc--eEEEcCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCc
Confidence 2 111 111222222233444332 11 11112222234556667777777765443 477777655
Q ss_pred chhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhH---HHHHHhcCCeEEECccccc-cc-----cCcccHH
Q 015784 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE---IGLLSRAGVKVSHCPASAM-RM-----LGFAPIK 317 (400)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~---i~~~~~~~~~~~~~p~~~~-~~-----~~~~~~~ 317 (400)
....+. ..+.+...|..-......|.. .+.++ .....+.|..+.+.-.... .+ .....++
T Consensus 199 ~~~~~~----------i~~~~~~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~~v~i~~~~~~~~~~~~~~~~~~~l~ 267 (387)
T cd01308 199 KRALSP----------IFELIEETEIPITQFLPTHIN-RTAPLFEQGVEFAKMGGTIDLTSSIDPQFRKEGEVRPSEALK 267 (387)
T ss_pred hHHHHH----------HHHHHHhcCCCcceeECCccc-CCHHHHHHHHHHHHcCCcEEEECCCCccccccCccChHHHHH
Confidence 332221 223444444421123333333 34442 3334455664333322111 11 1234567
Q ss_pred HHHHcCC---cEEEcCCCCCC---CC------------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhH
Q 015784 318 EMLHADI---CVSLGTDGAPS---NN------------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 379 (400)
Q Consensus 318 ~~~~~Gv---~v~~gtD~~~~---~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~ 379 (400)
.++++|+ +++++||+... .. ...++..+.... ...+++++++++++|.
T Consensus 268 ~~~~~g~~~d~i~l~TD~~~~~p~~~~~g~~~~~g~~~~~~~~~~~~~~v--------------~~~~i~~~~al~~~T~ 333 (387)
T cd01308 268 RLLEQGVPLERITFSSDGNGSLPKFDENGNLVGLGVGSVDTLLREVREAV--------------KCGDIPLEVALRVITS 333 (387)
T ss_pred HHHHhCCCCCcEEEEECCCCCcccCccCCeEEecCcCcHHHHHHHHHHHH--------------HhCCCCHHHHHHHHHH
Confidence 8888986 37999997311 00 001222233221 1234999999999999
Q ss_pred HHHHHcCCCCCccccccCcCC
Q 015784 380 NGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 380 ~~A~~lg~~~~~G~i~~G~~A 400 (400)
|||+++|+++ +|+|++|++|
T Consensus 334 npA~~lg~~~-~G~i~~G~~A 353 (387)
T cd01308 334 NVARILKLRK-KGEIQPGFDA 353 (387)
T ss_pred HHHHHhCCCC-CCCcCCCCcC
Confidence 9999999976 6999999987
|
Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides. |
| >COG3964 Predicted amidohydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.93 E-value=7.9e-24 Score=176.18 Aligned_cols=304 Identities=16% Similarity=0.182 Sum_probs=177.2
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+.+++++|++++++... +-+..+|.|.||||+++++ .++ +..+++||++|.+|.|||||.|+|.+.....
T Consensus 3 qfdiLLt~~rlidpa~g--~d~~tniai~ngkIaa~~d-~~a-----pa~tq~Ida~Gc~VspG~iDlHvHvy~ggt~-- 72 (386)
T COG3964 3 QFDILLTGGRLIDPARG--IDEITNIAIINGKIAAADD-YPA-----PAETQIIDADGCIVSPGLIDLHVHVYYGGTE-- 72 (386)
T ss_pred ccceeeeCCeecccccc--cCccceeeeecCeEEeccC-cCC-----ChhheEEccCccEeccCeeeeeeEEecCCCc--
Confidence 45899999999976543 3355589999999999994 332 2357999999999999999999999762211
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHHHHHHHH---cCCeEEEecccc
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVEL---LGLRACLVQSTM 171 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~~~~~~~---~g~~~~~~~~~~ 171 (400)
....++ .-....||||+.|.|... .....+.... ..+..++..+
T Consensus 73 ------------------~~v~pd----------~~ga~~GvTTvVDAGSaGaanf~gF~r~vie~Sr~RI~Aflnvs-- 122 (386)
T COG3964 73 ------------------GGVRPD----------MYGAPNGVTTVVDAGSAGAANFDGFYRTVIEASRVRIKAFLNVS-- 122 (386)
T ss_pred ------------------cCcCHH----------HccccCCceEEEecCCcCccchhhHHHHhhcchhheeeeeeecc--
Confidence 111111 125567999999986432 2222221111 1122222111
Q ss_pred cCCC-CCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeec--cccccCCHHHHHHHHHHHHHcCCeeeEecCCCch
Q 015784 172 DCGE-GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI--RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (400)
Q Consensus 172 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~ 248 (400)
..|- ++++-+.. ..-......+.++++...-. .+|.-... -+.+..+| +....++|++.++|+++|..+.+.
T Consensus 123 ~~Gl~a~nE~~d~--~nid~d~i~aa~reh~d~iv-GlKvR~s~~~~g~~GitP--l~la~~ia~~~klPlmvHigePp~ 197 (386)
T COG3964 123 PPGLTASNELYDP--DNIDEDKIHAAFREHRDVIV-GLKVRVSTEDIGEYGITP--LTLALRIANDLKLPLMVHIGEPPV 197 (386)
T ss_pred CcceeeehhhCCh--hhCCHHHHHHHHHhCcCcEE-EEEEEeeeccccccCCch--HHHHHHHHhhcCCceEEecCCCCc
Confidence 1110 01110100 00011123333333322111 12222222 23344554 677778889999999999998665
Q ss_pred hhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC-------h----hHHHHHHhcCCeEEECccccccccCcccHH
Q 015784 249 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------H----TEIGLLSRAGVKVSHCPASAMRMLGFAPIK 317 (400)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-------~----~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~ 317 (400)
..+.+.+... ..-++.||.+-- + .++++..+.|+......-.. .-...-.+
T Consensus 198 ~~dEvlerL~----------------~GDIitHcfngkpn~~l~~dg~vr~~vrra~erGV~fD~ghG~a--sfsf~vAr 259 (386)
T COG3964 198 LMDEVLERLR----------------RGDIITHCFNGKPNTILTDDGVVRAEVRRARERGVIFDAGHGRA--SFSFNVAR 259 (386)
T ss_pred cHHHHHHhcc----------------CCceeeeeccCCCCCccccchhHHHHHHHHHhcceEEEccCCcc--eeeHHHHH
Confidence 4343332222 235678887632 1 34567777788765432211 01223468
Q ss_pred HHHHcC-CcEEEcCCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 318 EMLHAD-ICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 318 ~~~~~G-v~v~~gtD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
+++.+| .+..|+||-... .+-+++..-|.... .-+++..+++.++|.|||..+++.+ +|
T Consensus 260 ~aia~GllP~~ISSDlh~~~~~n~Pv~dla~~mSKll---------------algmpl~~Vi~avT~npA~~i~l~~-~g 323 (386)
T COG3964 260 RAIANGLLPDIISSDLHTITKLNGPVYDLAWIMSKLL---------------ALGMPLTDVINAVTHNPAVLIGLAE-IG 323 (386)
T ss_pred HHHhcCCCcceeeccceeeeecCchHHHHHHHHHHHH---------------HcCCcHHHHHHHHhcCHHHHhCccc-cC
Confidence 899999 589999995321 11222223333322 3359999999999999999999985 79
Q ss_pred ccccCcCC
Q 015784 393 SLEAGKKV 400 (400)
Q Consensus 393 ~i~~G~~A 400 (400)
+|+||.+|
T Consensus 324 tLa~G~~a 331 (386)
T COG3964 324 TLAPGAFA 331 (386)
T ss_pred ccCCCccc
Confidence 99999876
|
|
| >COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.8e-23 Score=190.17 Aligned_cols=314 Identities=17% Similarity=0.198 Sum_probs=179.0
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|+++++.+ ....++|+|+||+|++|++.... + .+.++||++|++|+|||||.|+|+..
T Consensus 2 ~~lIk~~~iv~~~----~~~~~di~i~~g~I~~Ig~~l~~----~-~~~~iiD~~g~~v~PG~ID~HVH~re-------- 64 (430)
T COG0044 2 DLLIKNARVVDPG----EDEVADILIKDGKIAAIGKNLEP----T-SGAEIIDAKGLLVLPGLVDLHVHFRE-------- 64 (430)
T ss_pred cEEEeccEEEcCC----CceEecEEEECCEEEEeccCCCC----C-CCCcEEECCCCEEccCeeEEEEecCC--------
Confidence 5799999999752 23567999999999999986432 1 36799999999999999999999965
Q ss_pred CCChhHhhhhccccccCCCCh-hhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHH---HHHHHHcC-CeEEEecc
Q 015784 100 DVDLMTWLHDRIWPYESNMTE-EDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEM---AKAVELLG-LRACLVQS 169 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~---~~~~~~~g-~~~~~~~~ 169 (400)
..+.. +++.. +.+.++++|+|++.+|.... .+.. .+.++... +......
T Consensus 65 ----------------pg~~~ke~~~t----gs~AAa~GG~Ttv~dmPnt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~- 123 (430)
T COG0044 65 ----------------PGFEHKETFET----GSRAAAAGGVTTVVDMPNTKPPIDTAEALEDKLERAKGKSVVDYAFYG- 123 (430)
T ss_pred ----------------CCcchhhhHHH----HHHHHHcCCceEEEECCCCCCCCCCHHHHHHHHHHhhccceeEEEEEE-
Confidence 22222 22222 34779999999999986432 2222 22222111 1111111
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchh
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (400)
....+ .. ...+..+... ...++.++.. .....+.+.+++.++.+.+.|..+.+|+.+....
T Consensus 124 ~it~~------------~~---~~~~~~~~~~---~~g~~~F~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~ 184 (430)
T COG0044 124 GLTKG------------NL---GKLELTERGV---EAGFKGFMDD-STGALDDDVLEEALEYAAELGALILVHAEDDDLI 184 (430)
T ss_pred EEecc------------cc---chhhhhhhhh---ccceEEEecC-CcCcCCHHHHHHHHHHHHhcCCeEEEecCChhHh
Confidence 11110 00 0011111111 1223333322 2245677899999999999999999999665321
Q ss_pred hhHHhh-------hcCCCCCh------H-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCCe--EEECccccc----
Q 015784 250 NQVVMD-------TRKVDHGT------V-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK--VSHCPASAM---- 308 (400)
Q Consensus 250 ~~~~~~-------~~~~~~~~------~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~--~~~~p~~~~---- 308 (400)
...+.. .+-.++-. + +.+.-....+.+..+.|..... -+.++..+..|+. +.+||..-+
T Consensus 185 ~~~~~~~g~~~~~~~~~~~p~~aE~~~iar~~~la~~~g~~vhi~HiSt~~sv~li~~ak~~g~~vt~EvtphHL~l~~~ 264 (430)
T COG0044 185 AEGVMNEGLRAPELGLAGRPPIAEASAIARDLELARATGARVHICHISTKESVELIRAAKAEGIRVTAEVTPHHLLLDEE 264 (430)
T ss_pred hhHHHhcCccchhhccCCCChHHHHHHHHHHHHHHHHhCCcEEEEEcCCHHHHHHHHHHhhcCCceEEeecchheEccHh
Confidence 111110 00011111 1 1111122223344444444321 2335555555544 566776421
Q ss_pred ---c----------c---cCcccHHHHHHcCCcEEEcCCCCCCCCCCC-----------HHHHHHHHHHHhcccccccCC
Q 015784 309 ---R----------M---LGFAPIKEMLHADICVSLGTDGAPSNNRMS-----------IVDEMYLASLINKGREVFANG 361 (400)
Q Consensus 309 ---~----------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ 361 (400)
. + ..+..+.+.++.|....+.|||.|...... .--|..+...+.
T Consensus 265 ~~~~~~~~~k~nPPLR~~~dr~aL~~~l~~G~ID~iasDHaPht~eeK~~~f~~ap~G~~glE~~lpl~l~--------- 335 (430)
T COG0044 265 DIEDLGTLAKVNPPLRDEEDREALWEALKDGVIDVIASDHAPHTLEEKRLPFEEAPSGIPGLETALPLLLT--------- 335 (430)
T ss_pred HhhccCcceEECCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHhccchhhCCCCCccHHHHHHHHHH---------
Confidence 0 0 111234566788999999999986521000 001111111111
Q ss_pred CCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 362 TTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 362 ~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+....+|+++++++.|.|||++||+.. .|.|++|++|
T Consensus 336 lv~~g~lsl~~~v~~~S~nPA~ifgl~~-~g~i~~G~~A 373 (430)
T COG0044 336 LVKKGRLSLERLVELLSTNPARIFGLPP-KGAIEEGADA 373 (430)
T ss_pred HHHcCCcCHHHHHHHHhhCHHHHhCCCC-CCcccCCCcc
Confidence 0124559999999999999999999987 5889999987
|
|
| >COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=192.34 Aligned_cols=300 Identities=18% Similarity=0.236 Sum_probs=190.6
Q ss_pred CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEe-cCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccc
Q 015784 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAI-GQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA 94 (400)
Q Consensus 16 ~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~v-g~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~ 94 (400)
....+++++|+++++.-. .-+-.++|+|.+|+|+.| ++.. .++.++||+.|++|.|||||.|+|+..
T Consensus 21 ~~~adlv~~ng~ivdv~~--gei~~~dIaI~~grI~~v~~~~~-------~e~~~~iDa~g~yivPGfID~H~HIES--- 88 (584)
T COG1001 21 RAKADLVLKNGRIVDVVT--GEIYKGDIAIAGGRIVGVIGEYR-------AEATEVIDAAGRYIVPGFIDAHLHIES--- 88 (584)
T ss_pred CCCCCEEEECCEEEEeee--ccEEeeeEEEECCEEEEeecCcC-------cccceeecCCCCEeccceeecceeccc---
Confidence 456789999999997653 234567999999999995 4432 236799999999999999999999954
Q ss_pred ccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeec--------cCcCCHHHHHHHHHHcCCeEEE
Q 015784 95 KGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE--------AGGQHVSEMAKAVELLGLRACL 166 (400)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~--------~~~~~~~~~~~~~~~~g~~~~~ 166 (400)
..+++.+ |. +..+.+|+||+.. +|...+..+.+.++..+++.+.
T Consensus 89 ---------------------Sm~tP~~-FA------~~Vlp~GtTtvV~DPHEIaNV~G~~Gi~~ml~~a~~~pl~~~~ 140 (584)
T COG1001 89 ---------------------SMLTPSE-FA------RAVLPHGTTTVVSDPHEIANVLGEDGIRFMLDEAKETPLKVYV 140 (584)
T ss_pred ---------------------cccCHHH-HH------HHhhccCceEEeeCcHHHHhhccHHHHHHHHHHHhhCCeEEEE
Confidence 3344443 22 3488899999984 2444567788999998888766
Q ss_pred e-cccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCC
Q 015784 167 V-QSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245 (400)
Q Consensus 167 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~ 245 (400)
. +++....+ .......-..+...+++. +..- -.+.-++...+...-+++.+. .++.+++.|.+|.-|+..
T Consensus 141 ~~pScVPat~-----~Et~Ga~l~a~~i~e~~~-~p~V--igl~E~Mn~pgVi~~D~~~l~-kl~a~~~~~k~VdGHapg 211 (584)
T COG1001 141 MLPSCVPATP-----FETSGAELTAEDIKELLE-HPEV--IGLGEMMNFPGVIEGDPDMLA-KLEAARKAGKPVDGHAPG 211 (584)
T ss_pred ecccCccCCc-----cccCCceecHHHHHHHhh-CCCc--cchhhhcCCchhccCCHHHHH-HHHHHHHcCCeecccCCC
Confidence 4 44443321 111111111222223221 1111 111112444455555665554 456789999999999976
Q ss_pred CchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHcC-C
Q 015784 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD-I 324 (400)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G-v 324 (400)
-... .+..+...|+. ..|... +.|+..+-.+.|+.+.+.--|..+. -...++.+-+.| -
T Consensus 212 l~g~-------------~Ln~Y~aaGi~-----tDHE~~-t~EEa~~klr~Gm~i~iReGS~a~d-l~~l~~~i~e~~~~ 271 (584)
T COG1001 212 LSGK-------------ELNAYIAAGIS-----TDHEST-TAEEALEKLRLGMKIMIREGSAAKD-LAALLPAITELGSR 271 (584)
T ss_pred CChH-------------HHHHHHhcCCC-----cCcccC-CHHHHHHHHhCCcEEEEEcCchhhh-HHHHHHHHhhcCCc
Confidence 5431 33344445543 357766 5555444447899877653333221 011234444556 4
Q ss_pred cEEEcCCCCCCCC---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 325 CVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 325 ~v~~gtD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++.++||...+.. ...+-+-+|.+. +.|++|.+|++|+|+|||+.+|+++ +|.|+||+.|
T Consensus 272 ~~~lcTDD~~p~dl~~eGhld~~vR~Ai---------------~~Gv~p~~a~qmAtiN~A~~~gl~~-~G~iAPG~~A 334 (584)
T COG1001 272 RVMLCTDDRHPDDLLEEGHLDRLVRRAI---------------EEGVDPLDAYQMATINPAEHYGLDD-LGLIAPGRRA 334 (584)
T ss_pred eEEEECCCCChhHhhhcCCHHHHHHHHH---------------HcCCCHHHHHHHHhcCHHHHcCCcc-cccccCCccc
Confidence 7899999764421 122333445544 4569999999999999999999987 8999999987
|
|
| >PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=2e-23 Score=191.05 Aligned_cols=326 Identities=17% Similarity=0.140 Sum_probs=186.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++ ..+++++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|... +
T Consensus 2 ~~i~n~~i~~~~---~~~~~~~v~IedgkI~~I~~~~~~----~-~~~~~ID~~G~~l~PG~ID~HvHG~~--------g 65 (382)
T PRK11170 2 YALTNGRIYTGH---EVLDDHAVVIADGLIEAVCPVAEL----P-PGIEQRDLNGAILSPGFIDLQLNGCG--------G 65 (382)
T ss_pred EEEEeeEEECCC---CeEeCCEEEEECCEEEEecCCccC----C-CCCeEEeCCCCEEccceeeeeecCcc--------C
Confidence 679999999754 466788999999999999875432 1 24589999999999999999999854 1
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-CHHH---HHHHHHH-cCCeEEEecccccCCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSE---MAKAVEL-LGLRACLVQSTMDCGE 175 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~~~~---~~~~~~~-~g~~~~~~~~~~~~~~ 175 (400)
.++.+ + ....+.+. .....+.+++.|||++.+.... ..+. ..+...+ ..-....-.+++-+|+
T Consensus 66 ~~~~~-------~-~~~~~~~~----l~~~~~~~~~~GvTt~lpT~it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEGP 133 (382)
T PRK11170 66 VQFND-------T-AEAISVET----LEIMQKANEKSGCTSFLPTLITSSDELMKQAVRVMREYLAKHPNQALGLHLEGP 133 (382)
T ss_pred ccccc-------C-ccCCCHHH----HHHHHHHHHhcCEeEEeeeccCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeecC
Confidence 11100 0 00111111 1223355799999999986422 2222 1222211 1111122355667888
Q ss_pred CCCcccccCCchHHHH-HHHHHHHHhccCCCCCeEEE-eeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHH
Q 015784 176 GLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (400)
Q Consensus 176 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (400)
++++.+.+.+..+.+. ...+.++.+.... +.++++ +.|. ... . ++++.+.+.|+.+.+.......+ ..
T Consensus 134 fi~~~~~Gah~~~~~~~p~~~~~~~~~~~~-~~i~~iTlAPE---~~~---~-~~i~~l~~~gi~vs~GHs~A~~~--~~ 203 (382)
T PRK11170 134 YLNLVKKGTHNPEFIRKPDAEMVDFLCENA-DVITKVTLAPE---MVD---A-EVIRKLVEAGIVVSAGHSNATYE--EA 203 (382)
T ss_pred CCCcccCCCCCHHHhcCcCHHHHHHHHhcc-CCEEEEEECCC---CCc---H-HHHHHHHHCCcEEEeeCCcCCHH--HH
Confidence 8898888888877755 3345556665543 355543 2332 111 2 66777888888876554433322 22
Q ss_pred hhhcCCCCChHHHH---------hHhCCCC-----CC---eeeEEecCCChhHHHHHHhcC-Ce--EEECccccccc-cC
Q 015784 254 MDTRKVDHGTVTFL---------DKIEFLQ-----NN---LLSAHTVWVNHTEIGLLSRAG-VK--VSHCPASAMRM-LG 312 (400)
Q Consensus 254 ~~~~~~~~~~~~~l---------~~~~~~~-----~~---~~~~h~~~~~~~~i~~~~~~~-~~--~~~~p~~~~~~-~~ 312 (400)
.+.+..+.+.+.++ +..|+.+ .+ -+|..+.|+.++.++.+.+.. -. .++--....-+ .+
T Consensus 204 ~~a~~~Ga~~~THlfNaM~~~~hR~pg~vga~l~~~~~~~elI~Dg~Hv~p~~~~~~~~~k~~~~~lvtDa~~~~G~~~g 283 (382)
T PRK11170 204 KAGFRAGITFATHLYNAMPYITGREPGLVGAILDEPDVYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAGANIE 283 (382)
T ss_pred HHHHHcCCCEEeeccccCCcccCCCcchhhHhhcCCCcEEEEEcCcccCCHHHHHHHHHhcCCcEEEEeccccCCCCCCC
Confidence 22211111111111 0111111 11 356788899999988876653 22 22211111111 12
Q ss_pred cccHH---HHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 313 FAPIK---EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 313 ~~~~~---~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
.+.+. -..+.|. +.-.|+.-.++..++.+.++.+... .+++++++++++|.|||+++|+++
T Consensus 284 ~y~l~~~~v~v~~g~--~~~~~G~LAGs~l~l~~~v~~l~~~--------------~~~~~~eal~~aT~npA~~lgl~~ 347 (382)
T PRK11170 284 QFIFAGKTIYYRDGL--CVDENGTLSGSALTMIEAVRNLVEH--------------VGIALDEALRMATLYPARAIGVDK 347 (382)
T ss_pred eEEECCEEEEEECCE--EECCCCcccccHhHHHHHHHHHHHh--------------cCCCHHHHHHHHHHHHHHHhCCCC
Confidence 21110 0112231 1113333333567788888876532 359999999999999999999987
Q ss_pred CccccccCcCC
Q 015784 390 DIGSLEAGKKV 400 (400)
Q Consensus 390 ~~G~i~~G~~A 400 (400)
++|+|++|+.|
T Consensus 348 ~~G~i~~G~~A 358 (382)
T PRK11170 348 RLGSIEAGKVA 358 (382)
T ss_pred CccccCCCCcC
Confidence 78999999987
|
|
| >PRK08044 allantoinase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.4e-23 Score=197.40 Aligned_cols=320 Identities=15% Similarity=0.182 Sum_probs=175.0
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|++.++ . ..++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+....
T Consensus 3 ~~~~i~n~~vi~~~~---~-~~~~i~I~dg~I~~i~~~~~-------~~~~~iD~~G~~v~Pg~iD~h~h~~~~~----- 66 (449)
T PRK08044 3 FDLIIKNGTVILENE---A-RVVDIAVKGGKIAAIGQDLG-------DAKEVMDASGLVVSPGMVDAHTHISEPG----- 66 (449)
T ss_pred ceEEEECcEEEcCCC---C-EEEEEEEECCEEEEecCCCC-------CCCeEEECCCCEEcCCeeccccccCCCC-----
Confidence 478999999997432 2 34799999999999986431 2458999999999999999999985410
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-C-----CHHHHHHHHHHcCCeEEEeccccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q-----HVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-~-----~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
....++... ....++++|+|++.+++. . ..+......+...-+...-...+
T Consensus 67 ------------------~~~~e~~~~----~~~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~- 123 (449)
T PRK08044 67 ------------------RSHWEGYET----GTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQL- 123 (449)
T ss_pred ------------------ccccccHHH----HHHHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEE-
Confidence 001122221 336789999999999862 1 22222111121111110000000
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc-------cccCCHHHHHHHHHHHHHcCCeeeEecCC
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-------IMNATDRLLLETRDMAREFKTGIHMHVAE 245 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~e~l~~~~~~a~~~~~~v~~H~~~ 245 (400)
.+ +.. ....+...+. ..+.-.+++++.... ....++..+.+.++.+.+.|.++.+|+.+
T Consensus 124 ~~--~~~--------~~~~ei~~l~----~~gv~~fk~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~ 189 (449)
T PRK08044 124 GG--LVS--------YNLDRLHELD----EVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCEN 189 (449)
T ss_pred ee--eCC--------CCHHHHHHHH----HcCceEEEEEecccCcccccCCccCcCHHHHHHHHHHHHhcCCEEEEecCC
Confidence 01 000 0122222221 111123443332211 12245667888889999999999999975
Q ss_pred CchhhhHH--hhhcC--------CCCC------hH-HHHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcC--CeEEECcc
Q 015784 246 IPYENQVV--MDTRK--------VDHG------TV-TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAG--VKVSHCPA 305 (400)
Q Consensus 246 ~~~~~~~~--~~~~~--------~~~~------~~-~~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~--~~~~~~p~ 305 (400)
........ ....+ ..+- .+ +.+......+.+..+.|.... .-+.++.+++.| +.+.+||.
T Consensus 190 ~~l~~~~~~~~~~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~~~g~~vhi~HiSt~~~~~~i~~ak~~G~~it~e~~~h 269 (449)
T PRK08044 190 ALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHISSPEGVEEVTRARQEGQDVTCESCPH 269 (449)
T ss_pred HHHHHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEcChh
Confidence 54311111 00001 0000 11 122222223334555565542 234556666666 44566776
Q ss_pred cccc----c----------------cCcccHHHHHHcCCcEEEcCCCCCCCCCC---CHHHH--------HHHHHHHhcc
Q 015784 306 SAMR----M----------------LGFAPIKEMLHADICVSLGTDGAPSNNRM---SIVDE--------MYLASLINKG 354 (400)
Q Consensus 306 ~~~~----~----------------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~---~~~~~--------~~~~~~~~~~ 354 (400)
..+- + .....+.+.+..|...+++|||.|..... +++.. ..+...+...
T Consensus 270 ~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~sDH~P~~~~~K~~~~~~~~~g~~g~e~~l~~~~~~~ 349 (449)
T PRK08044 270 YFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMEAWGGIAGLQNCMDVMFDEA 349 (449)
T ss_pred hhcccHHHhhCCCCcEEEcCCCCChHHHHHHHHHHhCCCceEEEcCCCCCChHHccCChhhCCCCceEHHHHHHHHHHHH
Confidence 4220 0 11123444566899999999998752111 22211 1111111100
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||++||+++ .|+|++|++|
T Consensus 350 --------v~~~~l~~~~~v~~~s~npA~~lgl~~-~G~i~~G~~A 386 (449)
T PRK08044 350 --------VQKRGMSLPMFGKLMATNAADIFGLQQ-KGRIAPGKDA 386 (449)
T ss_pred --------HHcCCCCHHHHHHHHHHhHHHHhCCCC-CCcCCCCCcc
Confidence 123459999999999999999999964 5999999987
|
|
| >PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily [] | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.8e-25 Score=200.58 Aligned_cols=277 Identities=27% Similarity=0.369 Sum_probs=181.8
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--CHH---
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HVS--- 151 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--~~~--- 151 (400)
+|+|||||+|+|+.+....+. .+.++.+......+..++++|||++.+++.. ...
T Consensus 1 ~v~PGlID~H~H~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~ 60 (333)
T PF01979_consen 1 YVMPGLIDAHVHGGQGGLRGL--------------------LDPEDHYESIRTGAKAALKGGVTTVLDTPHTSPNPDIEL 60 (333)
T ss_dssp EEEE-EEEEEEEGGGTTHTTS--------------------SSHHHHHHHHHHHHHHHHHTTEEEEEEEEESSHCHHHHH
T ss_pred CEEcChhHHhhCcCCcCcccc--------------------CCHHHHHHHHHHHHHHHHhcCeEEEEcCcccCCcccccc
Confidence 699999999999987443322 4556667777778899999999999998322 211
Q ss_pred --HHHH---HHHHcCC-eEEEecccccC-CCCCCcccccCCchHHHHHHHHHHHHhccCCCC-----CeEEEeecccccc
Q 015784 152 --EMAK---AVELLGL-RACLVQSTMDC-GEGLPASWAVRTTDDCIQSQKELYAKHHHAADG-----RIRIWFGIRQIMN 219 (400)
Q Consensus 152 --~~~~---~~~~~g~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 219 (400)
...+ ....... ...+....... ..+..................++++.+...... .+......+....
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (333)
T PF01979_consen 61 RNEIMEGLAAAPKIEPAMTLLGTGSVGGHGEGPNEPPDKNGPHDEAFEGEDFIKFIEEAGSEIKRIDGVIPAISPHNPYT 140 (333)
T ss_dssp HHHHHHHHHHHHHHEEEEEEEEECECSEEEECHHHHHHHHSEHHHHHHHHHHHHHHHHHTTTCEEEECEEEEEEHHTTTT
T ss_pred ccccccccccchhhhccccccccccccccccccccccccccCCchhhhHHHHHHHhhhhhhhhccccccccccccccccc
Confidence 1111 1111111 11111111000 000000000000000000122333333322222 3344556667788
Q ss_pred CCHHHHHHHHHHHHH-----c-CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCC-----CCCeeeEEecCCChh
Q 015784 220 ATDRLLLETRDMARE-----F-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFL-----QNNLLSAHTVWVNHT 288 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~-----~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~h~~~~~~~ 288 (400)
.+.+.+...++.+++ . ++++.+|+.+.......+...+ +...++.+...+.+ +...++.|+.+++++
T Consensus 141 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~ 218 (333)
T PF01979_consen 141 VSDEELREAVELAKEFLAAEKLGIPVHIHVAEGTGEVEAMTHLY--GMSPIEALDHLGLLEEAIDDGVDLIAHGTHLSDE 218 (333)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTHEEEEEESSSHHHHCCCHHHH--SHHHHHHHHHHHSCHHHHHHHCEEEEEHTTSEHH
T ss_pred chhhhhhhHHhhhhhHHHHHhhcccceeeeccCcccceeEeeee--eccchhhhccchhhhhhcccccceeeccccCCHH
Confidence 888889999999888 4 9999999999888766666555 34467777777777 567889999999999
Q ss_pred HHHHHHhcCCeEEECcccccc--------------------c-cCcccHHHHHHc-CCcEEEcCCCCCCCCCCCHHHHHH
Q 015784 289 EIGLLSRAGVKVSHCPASAMR--------------------M-LGFAPIKEMLHA-DICVSLGTDGAPSNNRMSIVDEMY 346 (400)
Q Consensus 289 ~i~~~~~~~~~~~~~p~~~~~--------------------~-~~~~~~~~~~~~-Gv~v~~gtD~~~~~~~~~~~~~~~ 346 (400)
+++++++.+..+..||.++.. + ....++.+++++ |+. +|||+.. ++|+
T Consensus 219 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~g~~--lgtDg~~--------~~l~ 288 (333)
T PF01979_consen 219 EIELLKETGIGIIHCPISNDSAPHKPGKAIMMDGTAEGIYGLGSGGAPLFRMLDKMGVN--LGTDGVA--------EELK 288 (333)
T ss_dssp HHHHHHHHTHEEEEEHHHHHHHHHHTTHHSETTBSBTSBSCTTHHHHHHHHHHHCTTHE--ETTCTTC--------HHHH
T ss_pred HhhhhhccCCccccccchhhhhccccccccccchhccccccccccccchhhhhhhcccc--ccccccc--------cccc
Confidence 999999999999999998765 2 223456667777 888 9999321 7787
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 347 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.....+ ++++++|+++|.|||++||+++++|+|++||+|
T Consensus 289 ~~~~~~---------------~~~~~~l~~aT~n~Ak~lg~~~~~G~i~~G~~A 327 (333)
T PF01979_consen 289 LFVRLG---------------ISPEEALKMATINPAKILGLDDDKGSIEPGKDA 327 (333)
T ss_dssp HHHHHH---------------SHHHHHHHHHTHHHHHHTTSTTTSSSSSTTSB-
T ss_pred cccccc---------------ccccccccccchhHHHHcCCCCCEEEeCcCCCc
Confidence 776554 899999999999999999998889999999987
|
The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: |
| >PRK10027 cryptic adenine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=7.2e-23 Score=195.00 Aligned_cols=299 Identities=15% Similarity=0.152 Sum_probs=181.0
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+.+++|+|++|+++... . +..++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+..+
T Consensus 28 ~~~dllI~ng~vv~~~~~-~-~~~~~V~I~~GrI~~Vg~~~~~-----~~~~~vIDa~G~~v~PGlIDaHvHiess---- 96 (588)
T PRK10027 28 AVADYIIDNVSILDLING-G-EISGPIVIKGRYIAGVGAEYAD-----APALQRIDARGATAVPGFIDAHLHIESS---- 96 (588)
T ss_pred CCCCEEEECcEEEeCCCC-c-EEeeEEEEECCEEEEeCCCCCC-----CCCCeEEECCCCEEEECeEeccccCCcc----
Confidence 456789999999975322 2 3557899999999999764321 1235899999999999999999999651
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------CCHHHHHHHHHHcCCeEEEec
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACLVQ 168 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------~~~~~~~~~~~~~g~~~~~~~ 168 (400)
..++++ +. ..++.+|+|++.+... ..++.+.+.+...++.....
T Consensus 97 --------------------~~~p~~-~a------~aal~~G~TtVv~dPhei~nv~g~~gi~~~l~~a~~~p~~~~~~- 148 (588)
T PRK10027 97 --------------------MMTPVT-FE------TATLPRGLTTVICDPHEIVNVMGEAGFAWFARCAEQARQNQYLQ- 148 (588)
T ss_pred --------------------cCCHhH-HH------HHHHhCceEEEEcCCCCcccCCCHHHHHHHHHHhhhCCCeeEEe-
Confidence 122222 21 2478999999998432 22455667777777765432
Q ss_pred ccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCe--EEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCC
Q 015784 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI--RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~ 246 (400)
.-.+.+..+ .+......-...+..++++ . ...+ .-++...+...-+++.+.++... .+..+.-|+..-
T Consensus 149 -~ps~vpa~~-~~Et~Ga~~~~~~~~~~l~----~-~~v~glgEvMn~~~V~~~d~~~~~ki~~~---~~~~idGH~p~l 218 (588)
T PRK10027 149 -VSSCVPALE-GCDVNGASFTLEQMLAWRD----H-PQVTGLAEMMDYPGVISGQNALLDKLDAF---RHLTLDGHCPGL 218 (588)
T ss_pred -ecccCcCCc-ccccCCCcCCHHHHHHHhc----C-CCceeEEeccCccccccCCHHHHHHHHHh---CCCceECCCCCC
Confidence 111222111 0111111112223333332 1 1122 22344555566677788877743 789999998754
Q ss_pred chhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHH-HcC-C
Q 015784 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEML-HAD-I 324 (400)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~G-v 324 (400)
... .+..+...|+. -.|... +.++...-.+.|+.+.+.-.|..+ +...+..+. +.+ -
T Consensus 219 ~g~-------------~L~ay~aaGi~-----sDHE~~-t~eea~eklr~Gm~v~iRegS~~~--nl~~l~~~~~~~~~~ 277 (588)
T PRK10027 219 GGK-------------ELNAYIAAGIE-----NCHESY-QLEEGRRKLQLGMSLMIREGSAAR--NLNALAPLINEFNSP 277 (588)
T ss_pred ChH-------------HHHHHHHcCCC-----CCcccC-CHHHHHHHHHCCCEEEEeCCcccc--CHHHHHHHhhccCCC
Confidence 431 33334444443 357666 555555555889998877554332 111121222 222 3
Q ss_pred cEEEcCCCCCCCC---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 325 CVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 325 ~v~~gtD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++++||...... ..-+...++.+.. ..++++++|++|+|.|||+++|+++ +|+|++|+.|
T Consensus 278 ~~~l~TDd~~~~~l~~~Ghi~~~vr~av~--------------~~Gi~~~~Ai~mAT~nPA~~lgl~d-~G~IapG~~A 341 (588)
T PRK10027 278 QCMLCTDDRNPWEIAHEGHIDALIRRLIE--------------QHNVPLHVAYRVASWSTARHFGLNH-LGLLAPGKQA 341 (588)
T ss_pred eEEEEcCCCChHHHHhccCHHHHHHHHHH--------------HcCCCHHHHHHHHHHHHHHHcCCCC-CcccCCCCcC
Confidence 6899999864311 0112233444331 2469999999999999999999986 6999999987
|
|
| >PRK09061 D-glutamate deacylase; Validated | Back alignment and domain information |
|---|
Probab=99.92 E-value=7e-22 Score=188.13 Aligned_cols=322 Identities=17% Similarity=0.150 Sum_probs=180.0
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+++++|+|++|+++++. ....++|+|+||+|++|++... .+.++||++|++|+|||||+|+|....
T Consensus 17 ~~~~~li~~~~vid~~~~--~~~~~~v~I~~G~I~~ig~~~~-------~~~~viD~~g~~v~PG~ID~H~H~~~~---- 83 (509)
T PRK09061 17 APYDLVIRNGRVVDPETG--LDAVRDVGIKGGKIAAVGTAAI-------EGDRTIDATGLVVAPGFIDLHAHGQSV---- 83 (509)
T ss_pred ccCCEEEECcEEEeCCCC--eeccceEEEECCEEEEecCCCC-------CCCeEEeCCCCEEecCeEeeeeCCCCC----
Confidence 346789999999985543 3355799999999999997421 246899999999999999999997430
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-c-CCHHHHHHHHHHcC--CeEEEecccc-
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-G-QHVSEMAKAVELLG--LRACLVQSTM- 171 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~-~~~~~~~~~~~~~g--~~~~~~~~~~- 171 (400)
. . ...++..|+|++.++. + .......+.....+ +.........
T Consensus 84 --------------------~---~---------~~~~~~~GvTtvv~~~~~~~p~~~~~~~~~~~~~~vn~~~~~~~~~ 131 (509)
T PRK09061 84 --------------------A---A---------YRMQAFDGVTTALELEAGVLPVARWYAEQAGEGRPLNYGASVGWTP 131 (509)
T ss_pred --------------------c---c---------chhhccCCceeEEeeccCCCCHHHHHHHHHhcCCcceeehhcCcHH
Confidence 0 0 1236778999999873 2 22223333333333 2221111100
Q ss_pred -----cCCCCCCcc------------cc-cCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHH
Q 015784 172 -----DCGEGLPAS------------WA-VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233 (400)
Q Consensus 172 -----~~~~~~~~~------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~ 233 (400)
..++.+... +. ...+...+.+..+++++....+...++ .........+.+.+..+++.++
T Consensus 132 ~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~el~~m~~ll~~al~~Ga~gis--~~~~y~p~~~~~eL~~l~~~A~ 209 (509)
T PRK09061 132 ARIAVLTGPQAEGTIADFGKALGDPRWQERAATPAELAEILELLEQGLDEGALGIG--IGAGYAPGTGHKEYLELARLAA 209 (509)
T ss_pred HHHHHhCCcccccccccccccccccccccCCCCHHHHHHHHHHHHHHHHCCCCEEe--cCCccCCCCCHHHHHHHHHHHH
Confidence 011000000 11 111223344444444433333222222 2222233568889999999999
Q ss_pred HcCCeeeEecCCCch-----hhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC-------hhHHHHHHhcCCeE-
Q 015784 234 EFKTGIHMHVAEIPY-----ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------HTEIGLLSRAGVKV- 300 (400)
Q Consensus 234 ~~~~~v~~H~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-------~~~i~~~~~~~~~~- 300 (400)
++|.++.+|+.+... +...+ .+.+......+.+..+.|+.... -+.++++++.|+.+
T Consensus 210 ~~g~~v~~H~e~~~~~~~~~e~~av----------~~~i~lA~~~G~rv~IsHlss~g~~~~~~~le~I~~Ar~~Gi~Vt 279 (509)
T PRK09061 210 RAGVPTYTHVRYLSNVDPRSSVDAY----------QELIAAAAETGAHMHICHVNSTSLRDIDRCLALVEKAQAQGLDVT 279 (509)
T ss_pred HcCCEEEEEecCcccCCchhHHHHH----------HHHHHHHHHhCCCEEEEeeccCCcccHHHHHHHHHHHHHcCCcEE
Confidence 999999999986542 11111 12333333344567788887643 13466677777664
Q ss_pred -EECccc-----------cc----c----c----c---C---------------------------------cccHHHHH
Q 015784 301 -SHCPAS-----------AM----R----M----L---G---------------------------------FAPIKEML 320 (400)
Q Consensus 301 -~~~p~~-----------~~----~----~----~---~---------------------------------~~~~~~~~ 320 (400)
.++|.. +. + + . + ...+.+.+
T Consensus 280 ~e~~P~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 359 (509)
T PRK09061 280 TEAYPYGAGSTVVGAAFFDPGWLERMGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSV 359 (509)
T ss_pred EEecCcchhhhhhcccccCHHHHHHhCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHh
Confidence 566665 10 0 0 0 0 11133345
Q ss_pred HcCCcEEEcCCCCCCC-------------CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC-
Q 015784 321 HADICVSLGTDGAPSN-------------NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL- 386 (400)
Q Consensus 321 ~~Gv~v~~gtD~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg- 386 (400)
..+-. +++||+.+.. .......+++.+..+.+....+ ......+|++++++++|.+||++||
T Consensus 360 ~~p~~-~i~sD~~p~~~~~~~~~~~~~~~~~~~~~~h~r~~~~~~~~l~~~---v~~~~~isl~~ai~~~T~~pA~~lg~ 435 (509)
T PRK09061 360 LFPGA-AIASDAMPWTWSDGTVYEGDAWPLPEDAVSHPRSAGTFARFLREY---VRERKALSLLEAIRKCTLMPAQILED 435 (509)
T ss_pred CCCCc-eEecCCccccccccccccccccccccCCCCCchhhcchHHHHHHH---HhhcccCCHHHHHHHHHHHHHHHhcc
Confidence 55644 9999985420 0001111111111111100000 0012349999999999999999999
Q ss_pred ----CCCCccccccCcCC
Q 015784 387 ----WDNDIGSLEAGKKV 400 (400)
Q Consensus 387 ----~~~~~G~i~~G~~A 400 (400)
+++ .|+|++|+.|
T Consensus 436 ~~~~l~~-~G~i~~G~~A 452 (509)
T PRK09061 436 SVPAMRR-KGRLQAGADA 452 (509)
T ss_pred ccccccC-CEeeCCCCCc
Confidence 865 4999999987
|
|
| >PRK09060 dihydroorotase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.1e-22 Score=187.52 Aligned_cols=315 Identities=17% Similarity=0.179 Sum_probs=168.2
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+++++|+|++|+++++ . ..++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+...
T Consensus 4 ~~d~~i~~~~v~~~~~---~-~~~~i~i~~g~I~~i~~~~~------~~~~~~iD~~G~~v~PG~ID~HvH~~~~----- 68 (444)
T PRK09060 4 TFDLILKGGTVVNPDG---E-GRADIGIRDGRIAAIGDLSG------ASAGEVIDCRGLHVLPGVIDSQVHFREP----- 68 (444)
T ss_pred cCcEEEECCEEECCCC---C-eeeEEEEECCEEEEecCCCC------CCCceEEECCCCEEccCEEeccccccCC-----
Confidence 3578999999998542 2 35799999999999986432 1245899999999999999999998541
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHHHHHHHHcCCeEEEeccccc
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
.....++... ..+.++++|||++.++.... .+......+...-+...-..+..
T Consensus 69 ------------------~~~~~e~~~t----~~~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~ 126 (444)
T PRK09060 69 ------------------GLEHKEDLET----GSRAAVLGGVTAVFEMPNTNPLTTTAEALADKLARARHRMHCDFAFYV 126 (444)
T ss_pred ------------------CCCccchHHH----HHHHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhcccceeeEEEEe
Confidence 0011122222 23568899999999986321 22222222221111111000100
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeec--cccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGI--RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
.+ . . ....+..++. .+. +...++.++.. ......+++.+..++ ++.+..+.+|+.+... .
T Consensus 127 ~~---~-------~-~~~~~l~el~-~~~--gv~g~k~fm~~~~~~~~~~d~~~l~~~~---~~~~~~v~~H~E~~~l-~ 188 (444)
T PRK09060 127 GG---T-------R-DNADELAELE-RLP--GCAGIKVFMGSSTGDLLVEDDEGLRRIL---RNGRRRAAFHSEDEYR-L 188 (444)
T ss_pred cc---C-------C-CCHHHHHHHH-hhc--CceEEEEEeccCCCCcccCCHHHHHHHH---HhCCCeEEEECCCHHH-H
Confidence 00 0 0 0011122211 111 11224433321 111233455565554 4458899999865332 1
Q ss_pred hHHhhhc--------CCC-C-----ChH-HHHhHhCCCCCCeeeEEecCCChhHHHHHHhc--CCeEEECccccc----c
Q 015784 251 QVVMDTR--------KVD-H-----GTV-TFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA--GVKVSHCPASAM----R 309 (400)
Q Consensus 251 ~~~~~~~--------~~~-~-----~~~-~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~--~~~~~~~p~~~~----~ 309 (400)
....... ... . ..+ +.+......+.+..+.|... .+.++.+.+. .+.+.+||...+ .
T Consensus 189 ~~~~~~~~~g~~~~~~~~~p~~aE~~av~~~~~la~~~~~~lhi~h~st--~~~v~~i~~~~~~vt~ev~ph~l~l~~~~ 266 (444)
T PRK09060 189 RERKGLRVEGDPSSHPVWRDEEAALLATRRLVRLARETGRRIHVLHVST--AEEIDFLADHKDVATVEVTPHHLTLAAPE 266 (444)
T ss_pred HHHHHHHhcCCcccccccCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCC--HHHHHHHHHhCCCeEEEeChHHhccCchh
Confidence 1111000 000 0 011 12222333444565666664 4555555443 366777774311 0
Q ss_pred --------------c---cCcccHHHHHHcCCcEEEcCCCCCCCC------------CCCHHHHHHHHHHHhcccccccC
Q 015784 310 --------------M---LGFAPIKEMLHADICVSLGTDGAPSNN------------RMSIVDEMYLASLINKGREVFAN 360 (400)
Q Consensus 310 --------------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~ 360 (400)
+ .....+.+.+++|+..+++|||.|... +..- -+......+..
T Consensus 267 ~~~~~~~~~k~~PPlr~~~~~~~l~~al~~G~id~i~sDh~p~~~~~k~~~~~~~~~G~~g-~e~~~~l~~~~------- 338 (444)
T PRK09060 267 CYERLGTLAQMNPPIRDARHRDGLWRGVRQGVVDVLGSDHAPHTLEEKAKPYPASPSGMTG-VQTLVPIMLDH------- 338 (444)
T ss_pred hcccCCceEEEeCCCCCHHHHHHHHHHHhCCCccEEecCCCCCCHHHhcCCcccCCCCccc-HHHHHHHHHHH-------
Confidence 0 111234566778999999999986521 0110 11111111110
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 361 ~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.....++++++++++|.|||++||+.+ +|+|++|+.|
T Consensus 339 --v~~g~l~~~~~~~~~s~~pa~~~gl~~-~G~l~~G~~A 375 (444)
T PRK09060 339 --VNAGRLSLERFVDLTSAGPARIFGIAG-KGRIAVGYDA 375 (444)
T ss_pred --HHcCCCCHHHHHHHHhHhHHHHhCCCC-CCcccCCCcC
Confidence 112349999999999999999999954 5999999987
|
|
| >PRK08417 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.2e-23 Score=189.26 Aligned_cols=292 Identities=14% Similarity=0.141 Sum_probs=159.5
Q ss_pred EEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhh
Q 015784 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED 122 (400)
Q Consensus 43 i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (400)
|+|+||+|++|++.. .+.++||++|++|+|||||+|+|+.. ..+..++
T Consensus 1 i~I~dG~I~~i~~~~--------~~~~viDa~g~~vlPG~ID~HvH~~~------------------------~~~~~e~ 48 (386)
T PRK08417 1 IRIKDGKITEIGSDL--------KGEEILDAKGKTLLPALVDLNVSLKN------------------------DSLSSKN 48 (386)
T ss_pred CEEECCEEEEecCCC--------CCCeEEECCCCEEccCeeEEeeeeCC------------------------CCcChhh
Confidence 689999999998642 14689999999999999999999943 1122233
Q ss_pred HHHHHHHHHHHHHhcCcceeeccCcCCH-----HHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHH
Q 015784 123 SYISTLLCGIELIHSGVTCFAEAGGQHV-----SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY 197 (400)
Q Consensus 123 ~~~~~~~~~~~~l~~GvTt~~~~~~~~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (400)
... ..+.++++|||++.+|+.... +......+..+-.. ..+.+... .. .......+...
T Consensus 49 ~~t----~s~aA~aGGvTtv~dmpnt~P~~~~~~~~~~~~~~~~~~~---~~~~~~~~------~~-~~~~~~~~i~~-- 112 (386)
T PRK08417 49 LKS----LENECLKGGVGSIVLYPDSTPAIDNEIALELINSAQRELP---MQIFPSIR------AL-DEDGKLSNIAT-- 112 (386)
T ss_pred HHH----HHHHHHcCCcEEEEeCCCCCCCCCCHHHHHHHHHHhhccC---CcEEEEEE------EE-CCCccHHHHHH--
Confidence 222 336799999999999874221 12211111111100 00111100 00 01111222222
Q ss_pred HHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh-------hcCCCC-C-----hH
Q 015784 198 AKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD-------TRKVDH-G-----TV 264 (400)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~-------~~~~~~-~-----~~ 264 (400)
+... +...+.. ....+++.+.++++.+++.|+++.+|+.+.......... .+...+ . .+
T Consensus 113 --l~~~--Gv~~~k~----~~~~~~~~l~~~~~~a~~~g~~V~~HaEd~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~~v 184 (386)
T PRK08417 113 --LLKK--GAKALEL----SSDLDANLLKVIAQYAKMLDVPIFCRCEDSSFDDSGVMNDGELSFELGLPGIPSIAETKEV 184 (386)
T ss_pred --HHHC--CCEEEEC----CCCCCHHHHHHHHHHHHHcCCEEEEeCCCHHHhhHHHHhcChhhHHhCCCCCCHHHHHHHH
Confidence 2222 2221111 114678889999999999999999999764321111110 000000 0 11
Q ss_pred -HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECccccc-------c----ccCccc---------HHHHH
Q 015784 265 -TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAM-------R----MLGFAP---------IKEML 320 (400)
Q Consensus 265 -~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~-------~----~~~~~~---------~~~~~ 320 (400)
+.+......+.+..+.|...-. -+.++..++.| +.+.+||...+ . ++--+| +.+.+
T Consensus 185 ~~~~~la~~~~~~lhi~hvS~~~~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlR~~~d~~~L~~~l 264 (386)
T PRK08417 185 AKMKELAKFYKNKVLFDTLALPRSLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLALLEAL 264 (386)
T ss_pred HHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCCEEEEechHHHeeCHHHhcCcCcccEECCCCCCHHHHHHHHHHH
Confidence 2222333344455555554421 13344455565 55688887422 0 010123 34456
Q ss_pred HcCCcEEEcCCCCCCCCC---CCHH--------HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 321 HADICVSLGTDGAPSNNR---MSIV--------DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 321 ~~Gv~v~~gtD~~~~~~~---~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
..|...+++|||.|.... .+++ -+......+... .....++++++++++|.|||++||+.
T Consensus 265 ~~g~Id~i~SDHaP~~~~~K~~~~~~a~~G~~g~e~~~~~~~~~~--------v~~~~~~~~~~~~~~t~~pA~~lgl~- 335 (386)
T PRK08417 265 KEGKIDFLTSLHSAKSNSKKDLAFDEAAFGIDSICEYFSLCYTYL--------VKEGIITWSELSRFTSYNPAQFLGLN- 335 (386)
T ss_pred hcCCceEEEcCCCCCCHHHccCCHhHCCCCchHHHHHHHHHHHHH--------HhcCCCCHHHHHHHHHHHHHHHhCCC-
Confidence 789999999999875210 0122 111111111100 12345899999999999999999996
Q ss_pred CccccccCcCC
Q 015784 390 DIGSLEAGKKV 400 (400)
Q Consensus 390 ~~G~i~~G~~A 400 (400)
+ |+|++|+.|
T Consensus 336 ~-G~l~~G~~A 345 (386)
T PRK08417 336 S-GEIEVGKEA 345 (386)
T ss_pred C-CccCCCCcC
Confidence 4 999999987
|
|
| >PRK09059 dihydroorotase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.2e-22 Score=185.41 Aligned_cols=319 Identities=13% Similarity=0.111 Sum_probs=173.7
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|+++++. ...+++|+|+||+|++|++..... ..+ .+.++||++|++|+|||||+|+|+...
T Consensus 3 ~~~~i~n~~v~~~~~~--~~~~~~v~I~~G~I~~i~~~~~~~-~~~-~~~~viDa~G~~v~PG~ID~HvH~~~~------ 72 (429)
T PRK09059 3 RPILLANARIIDPSRG--LDEIGTVLIEDGVIVAAGKGAGNQ-GAP-EGAEIVDCAGKAVAPGLVDARVFVGEP------ 72 (429)
T ss_pred cCEEEEeeEEECCCCC--cccceEEEEECCEEEEecCccccc-cCC-CCCeEEECCCCEEeccEEecccccCCC------
Confidence 4689999999976532 335789999999999998743110 011 245899999999999999999999531
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HH---HHHHHHHHc-CCeEEEecc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VS---EMAKAVELL-GLRACLVQS 169 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~---~~~~~~~~~-g~~~~~~~~ 169 (400)
.....++ + ....+.++.+|||++.+++... .+ ...+.++.. .+...+...
T Consensus 73 -----------------~~~~~e~-~---~~~s~aa~~gGvTtv~~~p~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~ 131 (429)
T PRK09059 73 -----------------GAEHRET-I---ASASRAAAAGGVTSIIMMPDTDPVIDDVALVEFVKRTARDTAIVNIHPAAA 131 (429)
T ss_pred -----------------Cchhhhh-H---HHHHHHHHhCCcEEEEeccCCCCCCCCHHHHHHHHHHhcccCcccEEEEeE
Confidence 0000111 1 1233568899999999986321 12 112222211 222222111
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchh
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (400)
. ..+ .....+.+...+. .. .+..+.. ......+...+.++++.+++.|.++.+|+.+....
T Consensus 132 ~-~~~----------~~~~~l~e~~~l~----~~---Gv~~f~~-~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~ 192 (429)
T PRK09059 132 I-TKG----------LAGEEMTEFGLLR----AA---GAVAFTD-GRRSVANTQVMRRALTYARDFDAVIVHETRDPDLG 192 (429)
T ss_pred E-ecC----------CCCcchHHHHHHH----hc---CcEEEec-CCcccCCHHHHHHHHHHHHhcCCEEEEecCChhhh
Confidence 1 100 0111122222221 11 2222221 11223456678899999999999999998664421
Q ss_pred hh------HHhhhcC-CCC-C-----hH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECccccc----
Q 015784 250 NQ------VVMDTRK-VDH-G-----TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAM---- 308 (400)
Q Consensus 250 ~~------~~~~~~~-~~~-~-----~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~---- 308 (400)
.. ......+ ..+ . .+ +.+......+.+..+.|..... -+.++.+++.| +.+.+||..-+
T Consensus 193 ~~~~~~~~~~~~~~~~~~rP~~aE~~av~r~~~la~~~~~~~hi~hvs~~~~~~~i~~ak~~g~~vt~ev~phhL~l~~~ 272 (429)
T PRK09059 193 GNGVMNEGLFASWLGLSGIPREAEVIPLERDLRLAALTRGRYHAAQISCAESAEALRRAKDRGLKVTAGVSINHLSLNEN 272 (429)
T ss_pred cCCCcCCcHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHCCcEEEEecCCHHHHHHHHHHHHCCCCEEEeecHHHHhccHH
Confidence 10 0000000 000 0 11 1112222333455555554422 23455556666 44567776422
Q ss_pred -------cccCccc---------HHHHHHcCCcEEEcCCCCCCCCCC---CHH---------HHH-HHHHHHhccccccc
Q 015784 309 -------RMLGFAP---------IKEMLHADICVSLGTDGAPSNNRM---SIV---------DEM-YLASLINKGREVFA 359 (400)
Q Consensus 309 -------~~~~~~~---------~~~~~~~Gv~v~~gtD~~~~~~~~---~~~---------~~~-~~~~~~~~~~~~~~ 359 (400)
.+.-.+| +.+.+..|...+++|||.+..... +++ ..+ ..+...
T Consensus 273 ~~~~~~~~~kvnPPLR~~~d~~~L~~~l~~g~id~i~sDh~p~~~~~K~~~~~~~~~G~~gle~~l~~~~~~-------- 344 (429)
T PRK09059 273 DIGEYRTFFKLSPPLRTEDDRVAMVEAVASGTIDIIVSSHDPQDVDTKRLPFSEAAAGAIGLETLLAAALRL-------- 344 (429)
T ss_pred HHhccCCccEEcCCCCCHHHHHHHHHHHHcCCCcEEEeCCCCCCHHHCcCChhhCCCCcccHHHHHHHHHHH--------
Confidence 0011123 344566798899999998652100 111 111 111111
Q ss_pred CCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 360 NGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 360 ~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.....++++++++++|.|||+++|+. .|+|++|++|
T Consensus 345 ---v~~~~l~l~~~~~~~s~nPA~~~gl~--~G~l~~G~~A 380 (429)
T PRK09059 345 ---YHNGEVPLLRLIEALSTRPAEIFGLP--AGTLKPGAPA 380 (429)
T ss_pred ---HHcCCCCHHHHHHHHhHHHHHHhCCC--cCcccCCCcC
Confidence 12345899999999999999999995 4999999987
|
|
| >PRK06886 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.1e-22 Score=175.88 Aligned_cols=273 Identities=18% Similarity=0.148 Sum_probs=182.8
Q ss_pred ecccccCcCCccccccccc-----CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-------c
Q 015784 80 PGFVNTHVHTSQQLAKGIA-----DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-------G 147 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-------~ 147 (400)
=||||+|+|+......+.. ...++.+.+..+ ......++.++.+..+...++.++..|+|.++.+- .
T Consensus 20 ~gfv~~H~HlDk~~~~~~~~~~~~~~g~l~e~i~~~-~~~k~~~t~~dv~~Ra~~~l~~~~~~Gtt~iRtHvdvd~~~~l 98 (329)
T PRK06886 20 GGWVNAHAHADRAFTMTPEKIAIYHYANLQQKWDLV-DEVKRNSTVEDYYARFSQAIELMISQGVTAFGTFVDIDPICED 98 (329)
T ss_pred cCCccccccccccccCCCccccccCCCCHHHHHHHH-HHHhccCCHHHHHHHHHHHHHHHHHcCcccEeeeeccCCCccc
Confidence 3899999999876654431 234444433311 12235678888888888999999999999999642 2
Q ss_pred CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc---cccCCHHH
Q 015784 148 QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRL 224 (400)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~ 224 (400)
...+.+.+..++..-+.-+-...+.+.. +.... ..+++++.... .+.+..+ |+. ....+++.
T Consensus 99 ~~~~a~~~~r~~~~~~idlq~vafPq~g-----~~~~~-------~~~l~~~al~~-advvGGi--P~~~~~~~~~~~e~ 163 (329)
T PRK06886 99 RAIIAAHKAREVYKHDIILKFANQTLKG-----VIEPT-------AKKWFDIGSEM-VDMIGGL--PYRDELDYGRGLEA 163 (329)
T ss_pred cHHHHHHHHHHHhcCcceEEEEecChhh-----ccCcc-------HHHHHHHHHHh-CCEEeCc--cCCcCCCCCCCHHH
Confidence 2344455554443333322222222211 11101 12323222222 1233322 332 23567889
Q ss_pred HHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhH-------HHHHHhcC
Q 015784 225 LLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-------IGLLSRAG 297 (400)
Q Consensus 225 l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~-------i~~~~~~~ 297 (400)
+..++++|+++|++|.+|+.++........+. ..+.....|..+ +.++.|+..++..+ ++++++.|
T Consensus 164 l~~~~~lA~~~g~~Id~Hlde~~~~~~~~le~------l~~~~~~~Gl~g-rV~~sH~~~L~~~~~~~~~~~i~~La~ag 236 (329)
T PRK06886 164 MDILLDTAKSLGKMVHVHVDQFNTPKEKETEQ------LCDKTIEHGMQG-RVVAIHGISIGAHSKEYRYRLYQKMREAD 236 (329)
T ss_pred HHHHHHHHHHcCCCeEEeECCCCchhHHHHHH------HHHHHHHcCCCC-CEEEEEeccccCcChhhHHHHHHHHHHcC
Confidence 99999999999999999999876543322221 122233667765 79999999998664 99999999
Q ss_pred CeEEECcccccc---------c-cCcccHHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCC
Q 015784 298 VKVSHCPASAMR---------M-LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTT 363 (400)
Q Consensus 298 ~~~~~~p~~~~~---------~-~~~~~~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (400)
+.+++||.+|+. . .+..|+++|+++||+|++|||+.. +..+.|++++++.+....+.
T Consensus 237 i~Vv~~P~snl~l~~~~~~~p~~rGv~pv~eL~~aGV~V~lGtDnv~D~~~p~g~~Dmle~~~l~~~~~~~--------- 307 (329)
T PRK06886 237 MMVIACPMAWIDSNRKEDLMPFHNALTPADEMIPEGITVALGTDNICDYMVPLCEGDMWQELSLLAAGCRF--------- 307 (329)
T ss_pred CeEEECchhhhhhccccccCcCCCCCCCHHHHHHCCCeEEEecCCCcccCCCCCCCCHHHHHHHHHHHcCC---------
Confidence 999999998752 2 567899999999999999999863 23578999999998766531
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 364 DPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 364 ~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
.++.++|+++|.|+|++||++
T Consensus 308 ----~~~~~~l~maT~~gAraLgl~ 328 (329)
T PRK06886 308 ----YDLDEMVNIASINGRKVLGLE 328 (329)
T ss_pred ----CCHHHHHHHHhhhHHHHhCCC
Confidence 368999999999999999985
|
|
| >TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-21 Score=183.40 Aligned_cols=302 Identities=20% Similarity=0.188 Sum_probs=164.4
Q ss_pred eceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCC
Q 015784 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (400)
.+++|+|+||+|++|++... + .+.++||++|++|+|||||+|+|+... ...
T Consensus 4 ~~~~v~I~~g~I~~i~~~~~-----~-~~~~~ida~g~~v~PG~ID~H~H~~~~-----------------------~~~ 54 (411)
T TIGR00857 4 TEVDILVEGGRIKKIGKLRI-----P-PDAEVIDAKGLLVLPGFIDLHVHLRDP-----------------------GEE 54 (411)
T ss_pred EEEEEEEECCEEEEeeccCC-----C-CCCeEEECCCCEEecCEEEcccCCCCC-----------------------CCc
Confidence 45799999999999974211 1 245799999999999999999999530 011
Q ss_pred ChhhHHHHHHHHHHHHHhcCcceeeccCcC-----CHHHHHHHHHHcC----CeEEEecccccCCCCCCcccccCCchHH
Q 015784 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLG----LRACLVQSTMDCGEGLPASWAVRTTDDC 189 (400)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-----~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (400)
..++.. .....++.+|||++.++... ..+......+... +...+..... .+ .....
T Consensus 55 ~~~~~~----~~~~~~~~~GvTtv~~~~~t~p~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~-~~----------~~~~~ 119 (411)
T TIGR00857 55 YKEDIE----SGSKAAAHGGFTTVADMPNTKPPIDTPETLEWKLQRLKKVSLVDVHLYGGVT-QG----------NQGKE 119 (411)
T ss_pred cHhHHH----HHHHHHHhCCeEEEEEecCCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEe-cC----------Ccccc
Confidence 112211 12356899999999997532 1222211111111 1111111110 00 00011
Q ss_pred HHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHh-------hhcCCCC-
Q 015784 190 IQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM-------DTRKVDH- 261 (400)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~-------~~~~~~~- 261 (400)
+.+...+. .. +.+...+........++..+.++++.++++|+++.+|+.+......... ..+-..+
T Consensus 120 l~e~~~l~----~~--Gv~g~~f~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~~~~~~g~~~~~~~~~~~p 193 (411)
T TIGR00857 120 LTEAYELK----EA--GAVGRMFTDDGSEVQDILSMRRALEYAAIAGVPIALHAEDPDLIYGGVMHEGPSAAQLGLPARP 193 (411)
T ss_pred HHHHHHHH----HC--CcEEEEEEeCCcccCCHHHHHHHHHHHHHcCCEEEEecCCHHHHhhhhhcCCcccHhhCCCCCC
Confidence 22222221 11 2222112222223457788999999999999999999975432111100 0000000
Q ss_pred -----ChH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECccccc-------------------cc-cC
Q 015784 262 -----GTV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAM-------------------RM-LG 312 (400)
Q Consensus 262 -----~~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~-------------------~~-~~ 312 (400)
..+ +.+......+.+..+.|..... -+.++..++.| +.+.+||.+.+ +. .+
T Consensus 194 ~~aE~~ai~~~~~la~~~~~~~~i~Hvs~~~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~ 273 (411)
T TIGR00857 194 PEAEEVAVARLLELAKHAGCPVHICHISTKESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVNPPLREKED 273 (411)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEeCCCHHHHHHHHHHHHcCCcEEEeechhhheecHHHHhCCCccEEEcCCCCCHHH
Confidence 011 2222222334566666766522 23455556665 55677885421 00 11
Q ss_pred cccHHHHHHcCCcEEEcCCCCCCCCCC---CHH--------HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 015784 313 FAPIKEMLHADICVSLGTDGAPSNNRM---SIV--------DEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381 (400)
Q Consensus 313 ~~~~~~~~~~Gv~v~~gtD~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~ 381 (400)
...+.+.+..|...+++|||.|..... +++ -+......+.. ....+++++++++++|.||
T Consensus 274 ~~~L~~~l~~g~i~~i~sDh~p~~~~~k~~~~~~~~~G~~g~e~~~~~~~~~---------~~~~~~~~~~~~~~~t~~p 344 (411)
T TIGR00857 274 RLALIEGLKDGIIDIIATDHAPHTLEEKTKEFAAAPPGIPGLETALPLLLQL---------LVKGLISLKDLIRMLSINP 344 (411)
T ss_pred HHHHHHHHhcCCCcEEEcCCCCCChHHccCCHhhCCCCceeHHHHHHHHHHH---------HHhCCCCHHHHHHHHhHHH
Confidence 234566788899999999998652100 011 01111111111 0123599999999999999
Q ss_pred HHHcCCCCCccccccCcCC
Q 015784 382 AKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 382 A~~lg~~~~~G~i~~G~~A 400 (400)
|+++|++++ |+|++|+.|
T Consensus 345 a~~~g~~~~-G~l~~G~~A 362 (411)
T TIGR00857 345 ARIFGLPDK-GTLEEGNPA 362 (411)
T ss_pred HHHhCCCCC-CccCCCCcC
Confidence 999999765 999999987
|
All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase. |
| >TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915 | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-21 Score=180.22 Aligned_cols=297 Identities=14% Similarity=0.127 Sum_probs=164.3
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCC-cEeeecccccCcCCccccccccc
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g-~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
+++|+|++|+++ . ..+|+|+||||++|++.... .+.++||++| ++|+|||||+|+|+....
T Consensus 2 ~~~i~n~~i~~~--~-----~~~v~i~~g~I~~v~~~~~~------~~~~~iD~~g~~~l~PG~ID~H~H~~~~~----- 63 (365)
T TIGR03583 2 DLLIKNGRTVNG--T-----PVDIAIEDGKIAAVGTTITG------SAKQTIDLEGETYVSAGWIDDHTHCFPKS----- 63 (365)
T ss_pred cEEEECcEEecC--C-----eeEEEEECCEEEEecCCCCC------CCCeEEECCCCeEEecCEEEeeeccCCCc-----
Confidence 589999999963 1 23899999999999864321 2358999999 999999999999985310
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC---cCCHHHHHHHHHHcCCeEEEecccccCCC
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG---GQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (400)
..+ ..+ .. ..++..|||++.+++ ....+...+..+..+.+..........|.
T Consensus 64 -----------------~~~-~~~-~~------~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~G~ 118 (365)
T TIGR03583 64 -----------------ALY-YDE-PD------EIGVKTGVTTVVDAGSTGADDIDDFYRLAQQAKTNVFALLNISRIGL 118 (365)
T ss_pred -----------------ccc-cCC-Hh------HhhhcCceeEEEeCCCCCCCCHHHHHHHHHhhCCcEEEEeeehhccc
Confidence 000 011 00 125778999999864 33445555555554433322111111111
Q ss_pred CCCcccccCCchHHHHHHHHHHHHhccCCCCCe---EEEeeccc--cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRI---RIWFGIRQ--IMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
.++...............+.++.+. ..+ +..+.+.. ...+++..+.+.+..+ +.++++.+|+.+.....
T Consensus 119 -~~~~~~~~~~~~~~~~l~~~~~~~~----~~vv~~~~~~t~~~i~E~gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~~~ 192 (365)
T TIGR03583 119 -VAQDELADLSNLDASAVKQAVERYP----DFIVGLKARMSKSVVGDNGIEPLEIAKQIQQE-NLELPLMVHIGSAPPEL 192 (365)
T ss_pred -cChhhhhChHHhHHHHHHHHHHhCc----CcEEEEEEeecccccccCCcCHHHHHHHHHHh-cCCCcEEEEeCCCccCH
Confidence 0110000001112222333333222 112 22233221 1123344454444443 68999999998877643
Q ss_pred hHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-----------hHHHHHHhcCCeEEECc-cccccccCcccHHH
Q 015784 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCP-ASAMRMLGFAPIKE 318 (400)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-----------~~i~~~~~~~~~~~~~p-~~~~~~~~~~~~~~ 318 (400)
..+. ..... + ..+.|+..-.+ +.+....+.|+.+...- ...... .....
T Consensus 193 ~~i~-------------~~~~~-g--~~~~H~fng~~~~~~r~~g~~~~~~~~~l~~G~i~d~~hg~~~~~~---~~~~~ 253 (365)
T TIGR03583 193 DEIL-------------ALMEK-G--DVLTHCFNGKPNGILRETGEVKPSVLEAYNRGVILDVGHGTASFSF---HVAEK 253 (365)
T ss_pred HHHH-------------HHhcC-C--CeeeeeecCCCCCCCCCcchHHHHHHHHHhCeEEEEeCCCCCCchH---HHHHH
Confidence 3322 22211 1 24678775443 56666667787766542 211111 11233
Q ss_pred HHHcC-CcEEEcCCCCCCC----CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 015784 319 MLHAD-ICVSLGTDGAPSN----NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 319 ~~~~G-v~v~~gtD~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~ 393 (400)
+...+ +.++.++|.+..+ +...+...++... ..+++++++++++|.|||+++|+++ .|+
T Consensus 254 ~~~~~~~~~td~~d~~~~~~~~gp~~~l~~~~~~~~---------------~~g~~~~ea~~~~t~npa~~~gl~~-~g~ 317 (365)
T TIGR03583 254 AKRAGIFPDTISTDIYIRNRINGPVYSLATVMSKFL---------------ALGYSLEEVIEKVTKNAAEILKLTQ-KGR 317 (365)
T ss_pred HHhCCCCCcccccccccCCCccCccccHHHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHhCCCC-CCC
Confidence 44445 3456667653221 1223444444433 1259999999999999999999975 799
Q ss_pred cccCcCC
Q 015784 394 LEAGKKV 400 (400)
Q Consensus 394 i~~G~~A 400 (400)
|++|+.|
T Consensus 318 i~~g~~a 324 (365)
T TIGR03583 318 LQEGYDA 324 (365)
T ss_pred cCCCCcc
Confidence 9999987
|
Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown. |
| >COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.8e-22 Score=166.24 Aligned_cols=139 Identities=12% Similarity=0.117 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEEC
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~ 303 (400)
....+...|+++|+.+..|-+.+.+.++.. ...|+ .+ -....+.+..+...+.|..+.+.
T Consensus 211 ~r~~i~~~c~~rgI~lASHDDaT~~hV~es--------------~~~Gv-----~i-AEFPtT~eAA~asr~~Gm~VlMG 270 (377)
T COG3454 211 NRQAIAALCRERGIALASHDDATVEHVAES--------------HGLGV-----AI-AEFPTTVEAAKASRELGMQVLMG 270 (377)
T ss_pred hHHHHHHHHHHcCCceecCCcCcHHHHHHH--------------HhcCe-----eE-EeCccHHHHHHHHHHhCchhhcC
Confidence 455666889999999999986665533322 22221 11 11222455566666778887766
Q ss_pred ccccccc---cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHH
Q 015784 304 PASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 380 (400)
Q Consensus 304 p~~~~~~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~ 380 (400)
...-.+. .|--..+++.+.|+...++||+.|.+ ++...+...... ..++..+|++|.|.|
T Consensus 271 APNivrGgSHsGNvsA~ela~~glLDiLsSDY~P~S----Ll~A~F~La~~~-------------~~~~lpqAvalvt~n 333 (377)
T COG3454 271 APNIVRGGSHSGNVSARELAQHGLLDILSSDYVPAS----LLHAAFRLADLG-------------SNISLPQAVALVTKN 333 (377)
T ss_pred CCceeccCCcccchhHHHHHhCCceeeecccCCcHH----HHHHHHHHhhhh-------------cccCHHHHHHHhccC
Confidence 4443443 23345788999999999999987652 555444433222 236899999999999
Q ss_pred HHHHcCCCCCccccccCcCC
Q 015784 381 GAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 381 ~A~~lg~~~~~G~i~~G~~A 400 (400)
||+++|+.|| |+|++|++|
T Consensus 334 PA~algl~DR-G~Ia~GlrA 352 (377)
T COG3454 334 PARALGLTDR-GRIAPGLRA 352 (377)
T ss_pred HHHhcCCCcc-ccccccccc
Confidence 9999999975 999999987
|
|
| >TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.7e-20 Score=173.41 Aligned_cols=132 Identities=14% Similarity=0.118 Sum_probs=79.3
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++... ...+.++|+|+||+|++|++..+ ...++||++|++|+|||||+|+|+.....-. ...
T Consensus 2 ~iIkng~I~dp~~~-~~~~~~dI~IedGkIveIg~~~~-------~~~eVIDa~G~vVmPGfID~HvHg~gG~~~~-~R~ 72 (556)
T TIGR03121 2 ILIKNGTVYDPANG-IDGEVMDIFIRDGKIVEPVSGGT-------KPAKVIDASGKLVMAGGVDSHTHIAGPKVNV-GRL 72 (556)
T ss_pred EEEEeEEEEcCCCC-ccccccEEEEECCEEEEecCCCC-------CCCeEEECCCCEEEeCEEeeeECCCcccccc-ccc
Confidence 68999999985422 11245799999999999986422 1348999999999999999999997621110 000
Q ss_pred CChhHhhhhccccccCCCChh--hHHHHHHHHHHHHHhcCcceeeccC--cCCHHHHHHHHHHcCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEE--DSYISTLLCGIELIHSGVTCFAEAG--GQHVSEMAKAVELLGL 162 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~GvTt~~~~~--~~~~~~~~~~~~~~g~ 162 (400)
....+|..... +........ ..+..+.....++++.|+|++.+.. +.......+.....++
T Consensus 73 ~~pE~~~~~~~-~~~~~~r~Gtt~~lPTt~tt~y~ya~mGyTt~~eaa~~p~~arh~h~e~~~~p~ 137 (556)
T TIGR03121 73 LRPEDHRRDPE-PRTGLTRAGSGFSVPSTYATGYRYARMGYTTVFEAAVPPLNARHTHEEFADTPI 137 (556)
T ss_pred cCHHHHhhcch-hhhhhcCCCcceEehhHhHHHHHHHhCCccEEecCCCCccchhhhHHHhccCcc
Confidence 11222221100 000111111 1233444456889999999999954 4444445555555444
|
Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably. |
| >cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.2e-21 Score=175.42 Aligned_cols=152 Identities=14% Similarity=0.160 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.+..+++++++.+++++++...+....+ .+....+.|+.....++.|..+++++++.. .+..+.+
T Consensus 172 ~~v~~~~~la~~~~~~i~i~h~ss~~~l~-----------~i~~~~~~G~~~~~e~~~h~L~ld~~~~~~---~~~~~k~ 237 (374)
T cd01317 172 IMVARDLELAEATGARVHFQHLSTARSLE-----------LIRKAKAKGLPVTAEVTPHHLLLDDEALES---YDTNAKV 237 (374)
T ss_pred HHHHHHHHHHHHhCCcEEEEeCCCHHHHH-----------HHHHHHHCCCCEEEEecHHHHhcCHHHHhc---cCCceEE
Confidence 35778888999999998885555554333 222233445444445666888888877643 4666677
Q ss_pred Cccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCC---HHH--------HHHHHHHHhcccccccCCCCCCCCCCH
Q 015784 303 CPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMS---IVD--------EMYLASLINKGREVFANGTTDPAALPA 370 (400)
Q Consensus 303 ~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~---~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (400)
+|. ++. .+..++.+++++|+.+++|||+.+.+.... ++. ++.+...+.... ....+++
T Consensus 238 ~Pp--lr~~~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~~~~~~~~Gi~g~e~~l~~~~~~~~--------~~~~~~~ 307 (374)
T cd01317 238 NPP--LRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDLPFAEAPPGIIGLETALPLLWTLLV--------KGGLLTL 307 (374)
T ss_pred cCC--CCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhhCCCcHhHHHHHHHHHHHHHH--------HcCCCCH
Confidence 775 233 467789999999999999999987643221 111 333333332211 2335899
Q ss_pred HHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 371 ETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 371 ~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++++++|.|||+++|+. + |+|++|++|
T Consensus 308 ~~~~~~~t~npA~~lgl~-~-G~l~~G~~A 335 (374)
T cd01317 308 PDLIRALSTNPAKILGLP-P-GRLEVGAPA 335 (374)
T ss_pred HHHHHHHHHHHHHHhCCC-C-CcccCCCcC
Confidence 999999999999999997 3 999999987
|
This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth. |
| >cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.2e-20 Score=169.30 Aligned_cols=127 Identities=14% Similarity=0.129 Sum_probs=74.0
Q ss_pred EEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccc---ccccC
Q 015784 23 LHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA---KGIAD 99 (400)
Q Consensus 23 i~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~---~~~~~ 99 (400)
|+|++|+++... ...++++|+|+||+|++|++.. .+.++||++|++|+|||||+|+|+..... |.+.+
T Consensus 1 Ikng~V~d~~~~-~~~~~~dI~IedGkIv~Vg~~~--------~~~~vID~~G~~VmPGfID~HtH~~gg~~~~~r~~~p 71 (541)
T cd01304 1 IKNGTVYDPLNG-INGEKMDIFIRDGKIVESSSGA--------KPAKVIDASGKVVMAGGVDMHSHIAGGKVNVGRILRP 71 (541)
T ss_pred CEEEEEEcCCCc-ccccccEEEEECCEEEEEccCC--------CCCeEEECCCCEEECCeeeeeeCccccccccccccCh
Confidence 689999976432 2246789999999999998642 13589999999999999999999975321 11111
Q ss_pred CCChhHhhhh-ccccccCCCChhhHHHHHHHHHHHHHhcCcceeecc--CcCCHHHHHHHHHHcCC
Q 015784 100 DVDLMTWLHD-RIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA--GGQHVSEMAKAVELLGL 162 (400)
Q Consensus 100 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~--~~~~~~~~~~~~~~~g~ 162 (400)
.......... ...+....++.. ++...-..+.+.|+|++.+. .+.......+.....++
T Consensus 72 e~~~~~~~~~~~~~~~~~g~~~p----st~~tgy~ya~mGytt~~e~a~~p~~a~h~h~e~~~~p~ 133 (541)
T cd01304 72 EDHRRDPVPKGALRRAGVGFSVP----STLATGYRYAEMGYTTAFEAAMPPLNARHTHEEMADTPI 133 (541)
T ss_pred hhhhccccccccccccCCCccCC----CchHhhhHHHhcCcceeecccCCcccchhhhHHhccCcc
Confidence 1111000000 000001111111 11122266888999999984 34445555555555444
|
FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen. |
| >cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.7e-19 Score=160.46 Aligned_cols=259 Identities=25% Similarity=0.353 Sum_probs=177.3
Q ss_pred ccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------CHHHH
Q 015784 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEM 153 (400)
Q Consensus 82 ~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------~~~~~ 153 (400)
|||+|+|+.....++......+.. ....+.++.+......+.++++.|||++.++... ..+..
T Consensus 1 ~ID~H~H~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~~~~~~~~~~~~~~~~ 71 (275)
T cd01292 1 FIDTHVHLDGSALRGTRLNLELKE---------AEELSPEDLYEDTLRALEALLAGGVTTVVDMGSTPPPTTTKAAIEAV 71 (275)
T ss_pred CcccchhhHHHHHccCCCcccccc---------ccccCHHHHHHHHHHHHHHHHhcCceEEEeeEeecCccccchHHHHH
Confidence 799999998866555432221111 3556677777777888899999999999996532 24566
Q ss_pred HHHHHHc-CCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeecccccc---CCHHHHHHHH
Q 015784 154 AKAVELL-GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMN---ATDRLLLETR 229 (400)
Q Consensus 154 ~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~e~l~~~~ 229 (400)
.+.+... +++............. . .........+.+..+... +... +..+.... .+++.+..++
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~i~~~~~~--~~~g--i~~~~~~~~~~~~~~~~~~~~ 139 (275)
T cd01292 72 AEAARASAGIRVVLGLGIPGVPAA----V----DEDAEALLLELLRRGLEL--GAVG--LKLAGPYTATGLSDESLRRVL 139 (275)
T ss_pred HHHHHHhcCeeeEEeccCCCCccc----c----chhHHHHHHHHHHHHHhc--CCee--EeeCCCCCCCCCCcHHHHHHH
Confidence 7777777 7777665544332110 0 112222333334333221 1222 22332322 3788999999
Q ss_pred HHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECcccccc
Q 015784 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 309 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~ 309 (400)
+.++++++++.+|+.+.... ...+..+......+.+.++.|+...++++++++++.|+.+++||.++..
T Consensus 140 ~~a~~~~~~i~~H~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 208 (275)
T cd01292 140 EEARKLGLPVVIHAGELPDP-----------TRALEDLVALLRLGGRVVIGHVSHLDPELLELLKEAGVSLEVCPLSNYL 208 (275)
T ss_pred HHHHHcCCeEEEeeCCcccC-----------ccCHHHHHHHHhcCCCEEEECCccCCHHHHHHHHHcCCeEEECCccccc
Confidence 99999999999999877642 0122222222222567899999999999999999999999999998765
Q ss_pred c----cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 015784 310 M----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (400)
Q Consensus 310 ~----~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~ 384 (400)
. ....+++++++.|+++++|||++..+...+++.+++.+....+ .+++.+++++++|.|||++
T Consensus 209 ~~~~~~~~~~~~~~~~~g~~~~lgTD~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~t~n~a~~ 275 (275)
T cd01292 209 LGRDGEGAEALRRLLELGIRVTLGTDGPPHPLGTDLLALLRLLLKVLR------------LGLSLEEALRLATINPARA 275 (275)
T ss_pred ccCCcCCcccHHHHHHCCCcEEEecCCCCCCCCCCHHHHHHHHHHHHh------------cCCCHHHHHHHHhccccCC
Confidence 3 4567899999999999999999865445678888888765542 1279999999999999974
|
The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others. |
| >PRK01211 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.4e-19 Score=164.58 Aligned_cols=287 Identities=14% Similarity=0.115 Sum_probs=148.2
Q ss_pred eceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCC
Q 015784 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (400)
..++|+|+||+|++|++... +.++||++| +|+|||||+|+|+... ...
T Consensus 14 ~~~di~I~dGkI~~i~~~~~--------~~~~ida~g-~vlPG~ID~HvH~r~p-----------------------g~~ 61 (409)
T PRK01211 14 DYLEIEVEDGKIKSIKKDAG--------NIGKKELKG-AILPAATDIHVHFRTP-----------------------GET 61 (409)
T ss_pred EEEEEEEECCEEEEecCCCC--------CceEEEecc-EEcCCeEEeeeccCCC-----------------------CCc
Confidence 55799999999999986431 357899999 9999999999999651 111
Q ss_pred ChhhHHHHHHHHHHHHHhcCcceeeccCcC-----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHH
Q 015784 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 193 (400)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (400)
..+++...+ ++++++|||++.+|... ..+......+...-....-...+... . ... .
T Consensus 62 ~ked~~s~s----~AAaaGGvTtv~dmPnt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~~---~-------~~~--~-- 123 (409)
T PRK01211 62 EKEDFSTGT----LSAIFGGTTFIMDMPNNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSME---T-------GNN--A-- 123 (409)
T ss_pred ccCcHHHHH----HHHHcCCcEEEEECCCCCCCCChHHHHHHHHHHhccCceeeEEEEecc---C-------Cch--h--
Confidence 233433333 67899999999998632 12222222212111111111111000 0 000 0
Q ss_pred HHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhH-----HhhhcCCCCCh-HHH-
Q 015784 194 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV-----VMDTRKVDHGT-VTF- 266 (400)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~-----~~~~~~~~~~~-~~~- 266 (400)
+ +.. .+...+++++.... .........+.++.+.+.|.++.+|+.+....... ....+...+-. .|.
T Consensus 124 -~-~~~---~g~~~~k~f~~~~~-~~~~~~~~~~~l~~~~~~g~~v~~H~E~~~l~~~~~~~~~~~~~~~~~rP~~aE~~ 197 (409)
T PRK01211 124 -L-ILD---ERSIGLKVYMGGTT-NTNGTDIEGGEIKKINEANIPVFFHAELSECLRKHQFESKNLRDHDLARPIECEIK 197 (409)
T ss_pred -h-HHh---ccCcEEEEEcCCCc-CCCccccCHHHHHHHHccCCEEEEeccChHHhhhhhhCcchHhhCCCCCCHHHHHH
Confidence 1 111 12223444332110 00000112234466678899999999654321110 00111111101 111
Q ss_pred --HhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccc-----------------cc-cCcccHHHHHHcCCcE
Q 015784 267 --LDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM-----------------RM-LGFAPIKEMLHADICV 326 (400)
Q Consensus 267 --l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~-----------------~~-~~~~~~~~~~~~Gv~v 326 (400)
.....+...+..+.|... .+.+ ..+.+.+||...+ |. .....+.+.+..|...
T Consensus 198 ai~~~~~la~~~~hi~HvSt--~~~~-----~~vt~Ev~phhL~l~~~~~~~~~~kvnPPLRs~~d~~aL~~~l~dG~ID 270 (409)
T PRK01211 198 AVKYVKNLDLKTKIIAHVSS--IDVI-----GRFLREVTPHHLLLNDDMPLGSYGKVNPPLRDRWTQERLLEEYISGRFD 270 (409)
T ss_pred HHHHHHHHhCCCcEEEEecC--hhhc-----CceEEEecHHHHccccccccCCceeEcCCCCCHHHHHHHHHHHhCCCCC
Confidence 111111112333344333 2222 2566777776422 00 1122345567789999
Q ss_pred EEcCCCCCCCC-----------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccc
Q 015784 327 SLGTDGAPSNN-----------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395 (400)
Q Consensus 327 ~~gtD~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~ 395 (400)
+++|||.|... +..-++. .+...+. .....++|++++++++|.|||++||+. .|+|+
T Consensus 271 ~i~SDHaP~~~~eK~~~~~a~~G~~gle~-~lpl~~~---------~v~~~~isl~~~v~~~s~nPAki~gl~--kG~l~ 338 (409)
T PRK01211 271 ILSSDHAPHTEEDKQEFEYAKSGIIGVET-RVPLFLA---------LVKKKILPLDVLYKTAIERPASLFGIK--KGKIE 338 (409)
T ss_pred EEeCCCCCCChhHhCCHhhCCCCCCcHHH-HHHHHHH---------HHHcCCCCHHHHHHHHHHHHHHHhCCC--CCccc
Confidence 99999986411 1111111 1111111 012446999999999999999999994 49999
Q ss_pred cCcCC
Q 015784 396 AGKKV 400 (400)
Q Consensus 396 ~G~~A 400 (400)
+|++|
T Consensus 339 ~G~~A 343 (409)
T PRK01211 339 EGYDA 343 (409)
T ss_pred CCCcC
Confidence 99987
|
|
| >PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ] | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.1e-20 Score=172.08 Aligned_cols=170 Identities=22% Similarity=0.192 Sum_probs=120.8
Q ss_pred cccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHH
Q 015784 215 RQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLS 294 (400)
Q Consensus 215 ~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~ 294 (400)
+.....+++.+.++++.+.+.|+++.+|+.++..... .++.+...... ..++|+..++++++++++
T Consensus 217 ~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~a~~~-----------~l~a~~~~~~~---~~i~h~~~~~~~~~~~~~ 282 (404)
T PF07969_consen 217 SGLPSFDPEELEELVRAAREAGLQVAVHAIGDRAIDE-----------ALDAIEAARAR---GRIEHAELIDPDDIERMA 282 (404)
T ss_dssp TC--SSSHHHHHHHHHHHHHCT-EEEEEEESHHHHHH-----------HHHHHHHHTCC---HEEEEHCBCCHHHHHHHH
T ss_pred cccccccchhHHHHHHHHHhcCCeeEEEEcCCchHHh-----------HHHHHHhhccc---ceeeccccCCHHHHHHHH
Confidence 3445667777999999999999999999966554322 22233333221 278999999999999999
Q ss_pred hcCCeEEECccc--------c------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccC
Q 015784 295 RAGVKVSHCPAS--------A------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFAN 360 (400)
Q Consensus 295 ~~~~~~~~~p~~--------~------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (400)
+.++.+.++|.. . .+.....|++.++++|+++++|||++.. ..+++..+..+............
T Consensus 283 ~l~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gsD~p~~--~~~P~~~~~~~~~~~~~~~~~~~ 360 (404)
T PF07969_consen 283 ELGVTASVQPHFLFSWGGEWYEERLGPERARRIYPIRSLLDAGVRVALGSDAPVS--PPNPFRGIWAAVTRQMAGERSGP 360 (404)
T ss_dssp HHTTEEEECCTHHHHETEETHHHHHHHHCGGGBTHHHHHHHCTTEEEE--TTTTS--SCCHHHHHHHHHHHHHCHHTHHH
T ss_pred HhCCccccChhHhhhccchhhhhhhhhHHHHHHhHHHHHHhccCceecCcCCccc--ccCcchhhhhhhccccccccccc
Confidence 999999999921 0 0123457899999999999999998853 35677667666544432211111
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 361 ~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++.+|++|||+++|.|||+++|+++++|+|++||.|
T Consensus 361 ~~~~~~~ls~~eAl~~~T~~~A~~~g~~~~~Gsl~~Gk~A 400 (404)
T PF07969_consen 361 VLGPEQRLSLEEALRAYTSNPARALGLEDRKGSLEPGKLA 400 (404)
T ss_dssp CCGGTGSSHHHHHHHHTTHHHHHHTT-TTTSSSSSTTSBS
T ss_pred cccccccCCHHHHHHHHhHHHHHHcCCCCCcceECCCCCc
Confidence 1112356999999999999999999999999999999987
|
Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A .... |
| >PRK04250 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.6e-19 Score=162.08 Aligned_cols=85 Identities=21% Similarity=0.383 Sum_probs=60.0
Q ss_pred ecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChh
Q 015784 25 NAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLM 104 (400)
Q Consensus 25 n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~ 104 (400)
+++|++.+ .+ .+++|+|+||+|++|++.. . .+.++||++|++|+|||||+|+|+...
T Consensus 3 ~~~v~~~~---~~-~~~~i~i~~G~I~~i~~~~-~------~~~~~iD~~g~~v~PG~ID~HvH~~~~------------ 59 (398)
T PRK04250 3 EGKFLLKG---RI-VEGGIGIENGRISKISLRD-L------KGKEVIKVKGGIILPGLIDVHVHLRDF------------ 59 (398)
T ss_pred eEEEEECC---cE-EEEEEEEECCEEEEeeCCC-C------CCCeEEECCCCEEccCEEeccccccCC------------
Confidence 56778643 23 3689999999999997411 1 245899999999999999999998320
Q ss_pred HhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc
Q 015784 105 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG 147 (400)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~ 147 (400)
.....++. ....+.++++|+|++.+++.
T Consensus 60 -----------~~~~~e~~----~~~~~aa~~gGvTtv~~~p~ 87 (398)
T PRK04250 60 -----------EESYKETI----ESGTKAALHGGITLVFDMPN 87 (398)
T ss_pred -----------CCCcHHHH----HHHHHHHHhCCeEEEEECCC
Confidence 01111221 22346799999999999863
|
|
| >cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively | Back alignment and domain information |
|---|
Probab=99.83 E-value=4e-18 Score=154.88 Aligned_cols=247 Identities=18% Similarity=0.159 Sum_probs=169.2
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeec-cCcC-------C--------HHHHHHHHHHcC
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE-AGGQ-------H--------VSEMAKAVELLG 161 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~-~~~~-------~--------~~~~~~~~~~~g 161 (400)
..+.++.+|+....|+.....++++.+..++..+.++++.|||++-. ..+. . .+...+..++.|
T Consensus 46 ~~~~~l~~~l~~~~~~~~~~~~~ed~~~~~~~~~~e~~~~Gvt~~E~~~~p~~~~~~~~~~~~~~~~~~~ai~~~~~~~g 125 (325)
T cd01320 46 YNFSDLQDFLAKYDFGLSVLQTEEDFERLAYEYLEDAAADGVVYAEIRFSPQLHTRRGLSFDEVVEAVLRGLDEAEAEFG 125 (325)
T ss_pred ccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeCchhhccCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 35567788988887777777889999999999999999999996532 1110 0 223345556668
Q ss_pred CeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeE
Q 015784 162 LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM 241 (400)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~ 241 (400)
++..+........ +........+...++.. +..+.+.+.... ...+.+.+..+++.|++.|+++.+
T Consensus 126 i~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~--~~vvg~~l~~~~-~~~~~~~~~~~~~~A~~~g~~v~~ 191 (325)
T cd01320 126 IKARLILCGLRHL-----------SPESAQETLELALKYRD--KGVVGFDLAGDE-VGFPPEKFVRAFQRAREAGLRLTA 191 (325)
T ss_pred CeEEEEEEecCCC-----------CHHHHHHHHHHHHhccC--CCEEEeecCCCC-CCCCHHHHHHHHHHHHHCCCceEE
Confidence 8876654433211 11223333333333322 123333222222 234778999999999999999999
Q ss_pred ecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcCCeEEECccccccc-cC----cc
Q 015784 242 HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-LG----FA 314 (400)
Q Consensus 242 H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~-~~----~~ 314 (400)
|+.|+..... ..+.+...+. ..+.|+.+++ +++++++++.|+.+++||.+|+.+ .. ..
T Consensus 192 H~~E~~~~~~-----------~~~a~~~~g~----~~i~H~~~l~~~~~~~~~l~~~gi~v~~~P~sn~~l~~~~~~~~~ 256 (325)
T cd01320 192 HAGEAGGPES-----------VRDALDLLGA----ERIGHGIRAIEDPELVKRLAERNIPLEVCPTSNVQTGAVKSLAEH 256 (325)
T ss_pred eCCCCCCHHH-----------HHHHHHHcCC----cccchhhccCccHHHHHHHHHcCCeEEECCCccccccccCCcccC
Confidence 9998743211 1122232332 2478999984 668999999999999999999876 22 57
Q ss_pred cHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 315 ~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
|++.|+++||++++|||+++. .+.+++.+++.+.... +++++| |..+|.|+++...+.+
T Consensus 257 p~~~l~~~Gv~v~lgTD~~~~-~~~~~~~e~~~~~~~~--------------~l~~~e-l~~~~~na~~~~f~~~ 315 (325)
T cd01320 257 PLRELLDAGVKVTINTDDPTV-FGTYLTDEYELLAEAF--------------GLTEEE-LKKLARNAVEASFLSE 315 (325)
T ss_pred hHHHHHHCCCEEEECCCCCcc-cCCCHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHhCCCH
Confidence 999999999999999998765 3467899998876432 489999 5668899999887653
|
ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases. |
| >PRK09358 adenosine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6.8e-18 Score=154.09 Aligned_cols=248 Identities=17% Similarity=0.140 Sum_probs=171.4
Q ss_pred cccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceee---ccCc-----C--------CHHHHHHHHHH
Q 015784 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFA---EAGG-----Q--------HVSEMAKAVEL 159 (400)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~---~~~~-----~--------~~~~~~~~~~~ 159 (400)
+...+.++.+|+..+.|+.....++++.+..++..+.++++.|||++- +... . ..+...++..+
T Consensus 52 ~~~~~~~l~~~l~~~~~~~~~~~t~ed~~~~~~~~~~e~~~~Gvty~E~~~~p~~~~~~gl~~~~~~~a~~~~~~~a~~~ 131 (340)
T PRK09358 52 AAYDFRDLQSFLDKYDAGVAVLQTEEDLRRLAFEYLEDAAADGVVYAEIRFDPQLHTERGLPLEEVVEAVLDGLRAAEAE 131 (340)
T ss_pred ccccCCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCEEEEEEeChhhhhhcCCCHHHHHHHHHHHHHHHHHh
Confidence 344556788999988888777889999999999999999999999753 2210 0 02233455566
Q ss_pred cCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc-cccCCHHHHHHHHHHHHHcCCe
Q 015784 160 LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-IMNATDRLLLETRDMAREFKTG 238 (400)
Q Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~l~~~~~~a~~~~~~ 238 (400)
.|++..+........ + .........+.++.+. ....+.+ ++.+ ....+++.+..+++.|++.|++
T Consensus 132 ~gi~~~li~~~~r~~---~-------~~~~~~~~~~~~~~~~--~~~vvg~--~l~g~e~~~~~~~~~~~~~~A~~~g~~ 197 (340)
T PRK09358 132 FGISVRLILCFMRHF---G-------EEAAARELEALAARYR--DDGVVGF--DLAGDELGFPPSKFARAFDRARDAGLR 197 (340)
T ss_pred cCceEEEEEEecCCC---C-------HHHHHHHHHHHHHHhc--CCcEEEE--eCCCcCCCCCHHHHHHHHHHHHHCCCC
Confidence 788887765544321 1 1122223333333322 1223332 3322 2345778899999999999999
Q ss_pred eeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcCCeEEECccccccc-c----
Q 015784 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-L---- 311 (400)
Q Consensus 239 v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~-~---- 311 (400)
+++|+.|...... ..+.+...|. ..+.|+.+++ +++++++++.|+.+++||.||+.+ .
T Consensus 198 ~~~H~~E~~~~~~-----------~~~al~~lg~----~ri~Hg~~l~~~~~~~~~l~~~gi~v~~cP~Sn~~l~~~~~~ 262 (340)
T PRK09358 198 LTAHAGEAGGPES-----------IWEALDELGA----ERIGHGVRAIEDPALMARLADRRIPLEVCPTSNVQTGAVPSL 262 (340)
T ss_pred eEEcCCCCCchhH-----------HHHHHHHcCC----cccchhhhhccCHHHHHHHHHcCCeEEECCCccccccccCCc
Confidence 9999998653211 1122232332 2368999985 567999999999999999999876 3
Q ss_pred CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 312 GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 312 ~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
+..|+++|+++||+|++|||++.. .+.+++++++.+.... +++++++ ..++.|+.+...++
T Consensus 263 ~~~pi~~l~~~Gv~v~lgTD~~~~-~~~~l~~e~~~~~~~~--------------~l~~~el-~~l~~nai~~sf~~ 323 (340)
T PRK09358 263 AEHPLKTLLDAGVRVTINTDDPLV-FGTTLTEEYEALAEAF--------------GLSDEDL-AQLARNALEAAFLS 323 (340)
T ss_pred ccChHHHHHHCCCEEEECCCCCcc-cCCCHHHHHHHHHHHh--------------CCCHHHH-HHHHHHHHHHHCCC
Confidence 568999999999999999999865 3468999999877432 4899994 66678888776554
|
|
| >cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.9e-18 Score=160.69 Aligned_cols=253 Identities=17% Similarity=0.213 Sum_probs=142.2
Q ss_pred eCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-----
Q 015784 72 DLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----- 146 (400)
Q Consensus 72 D~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~----- 146 (400)
|++|++|+|||||+|+|+.. ..++..+ ..+.++.+|||++.+.+
T Consensus 1 Da~G~~v~PG~ID~H~Hi~~------------------------~~~~~~~-------~~~~a~~~GvTtvv~~p~~~~~ 49 (422)
T cd01295 1 DAEGKYIVPGFIDAHLHIES------------------------SMLTPSE-------FAKAVLPHGTTTVIADPHEIAN 49 (422)
T ss_pred CCCCCEEccCEEEccCCcCC------------------------CCCChHH-------HHHHHHCCCcEEEEeCCCCCCc
Confidence 78999999999999999965 1122222 13568899999999853
Q ss_pred ---cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHH
Q 015784 147 ---GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (400)
Q Consensus 147 ---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 223 (400)
....+.+.+.+++..++.+..... ..+..+.+ .........+..++++. ..--.++-.+..... ..+++
T Consensus 50 v~g~~~~~~~~~~a~~~p~~~~~~~p~--~vp~t~~e--~~g~~~~~~~i~~l~~~---~~vvglgE~md~~~v-~~~~~ 121 (422)
T cd01295 50 VAGVDGIEFMLEDAKKTPLDIFWMLPS--CVPATPFE--TSGAELTAEDIKELLEH---PEVVGLGEVMDFPGV-IEGDD 121 (422)
T ss_pred CCCHHHHHHHHHHHhCCCceEEEeCCC--cCCCCCCC--CCCCcCCHHHHHHHhcC---CCCcEEEEeccCccc-cCCcH
Confidence 122344455555555544332210 00000100 00011112333333221 111112222222111 23556
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEEC
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~ 303 (400)
.+.+.++.+++.|+++.+|+...... .+..+...+.. ..|+....++.++++ +.|+.+.++
T Consensus 122 ~l~~~i~~A~~~g~~v~~Ha~g~~~~-------------~L~a~l~aGi~-----~dH~~~~~eea~e~l-~~G~~i~i~ 182 (422)
T cd01295 122 EMLAKIQAAKKAGKPVDGHAPGLSGE-------------ELNAYMAAGIS-----TDHEAMTGEEALEKL-RLGMYVMLR 182 (422)
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCHH-------------HHHHHHHcCCC-----CCcCCCcHHHHHHHH-HCCCEEEEE
Confidence 78889999999999999999765521 11111122321 247777555555555 789998887
Q ss_pred ccccccccCcccHHHHHH--cCCcEEEcCCCCCCCCC---CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHh
Q 015784 304 PASAMRMLGFAPIKEMLH--ADICVSLGTDGAPSNNR---MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378 (400)
Q Consensus 304 p~~~~~~~~~~~~~~~~~--~Gv~v~~gtD~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T 378 (400)
+.+... ....+.+.+. .+.+++++||.+..++. ..+...++.+. ..+++++++++++|
T Consensus 183 ~g~~~~--~~~~~~~~l~~~~~~~i~l~TD~~~~~~~~~~g~~~~v~r~a~---------------~~g~s~~eal~~aT 245 (422)
T cd01295 183 EGSIAK--NLEALLPAITEKNFRRFMFCTDDVHPDDLLSEGHLDYIVRRAI---------------EAGIPPEDAIQMAT 245 (422)
T ss_pred CcccHh--hHHHHHHhhhhccCCeEEEEcCCCCchhhhhcchHHHHHHHHH---------------HcCCCHHHHHHHHh
Confidence 654311 0111111122 47899999998633111 11112222211 23589999999999
Q ss_pred HHHHHHcCCCCCccccccCcCC
Q 015784 379 INGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 379 ~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.|||+++|+ +++|+|++|+.|
T Consensus 246 ~n~A~~~gl-~~~G~i~~G~~A 266 (422)
T cd01295 246 INPAECYGL-HDLGAIAPGRIA 266 (422)
T ss_pred HHHHHHcCC-CCCcccCCCCcC
Confidence 999999999 557999999987
|
This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea. |
| >PRK00369 pyrC dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=6.8e-18 Score=155.10 Aligned_cols=281 Identities=16% Similarity=0.124 Sum_probs=148.5
Q ss_pred eceeEEEeCCEEEEecCChhhhhhhccCCCcEEeC-CCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCC
Q 015784 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDL-QSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESN 117 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~-~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (400)
.+..|.+++|+|..|++... .+.++||+ +|++|+|||||+|+|+... ..
T Consensus 12 ~~~~~~~~~~~~~~i~~~~~-------~~~~~id~~~G~~vlPG~ID~HvH~r~p-----------------------g~ 61 (392)
T PRK00369 12 GKEIKEICINFDRRIKEIKS-------RCKPDLDLPQGTLILPGAIDLHVHLRGL-----------------------KL 61 (392)
T ss_pred CCceEEEeeeeeeeEeeccC-------CCCceeecCCCCEEeCCEEEcccccCCC-----------------------CC
Confidence 45578999999999887521 25789999 6999999999999999541 11
Q ss_pred CChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHH
Q 015784 118 MTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQS 192 (400)
Q Consensus 118 ~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (400)
...+++...+ ++++++|+|++.+|.... .+..........-....-...+. + .. .. ..
T Consensus 62 ~~~ed~~sgs----~AAa~GGvTtv~~mPnt~P~~~~~~~l~~~~~~a~~~~~vd~~~~~-~--~~------~~---~~- 124 (392)
T PRK00369 62 SYKEDVASGT----SEAAYGGVTLVADMPNTIPPLNTPEAITEKLAELEYYSRVDYFVYS-G--VT------KD---PE- 124 (392)
T ss_pred cccccHHHHH----HHHHhCCcEEEEECCCCCCCCChHHHHHHHHHHhCcCCeEEEEEEe-e--cc------CC---HH-
Confidence 1223333333 678999999999986322 22222222221111111111110 1 00 00 11
Q ss_pred HHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCCh-HH--HHhH
Q 015784 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT-VT--FLDK 269 (400)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~-~~--~l~~ 269 (400)
+ +..+ ....++.+. .. .... .+++.+.+.+.++.+|+.+... .... .+..+.. .| .+..
T Consensus 125 --e-l~~~---~~~g~k~f~---~~-~~~~----~~~~~~~~~~~~v~~HaE~~~l-~~~~---~~~~rp~~aE~~ai~~ 186 (392)
T PRK00369 125 --K-VDKL---PIAGYKIFP---ED-LERE----ETFRVLLKSRKLKILHPEVPLA-LKSN---RKLRRNCWYEIAALYY 186 (392)
T ss_pred --H-HHHh---hCceEEEEC---CC-CchH----HHHHHHHHhCCEEEEeCCCHHH-hhcc---hhcccCHHHHHHHHHH
Confidence 1 1111 112234331 11 1122 2334445556899999965332 1100 1111101 11 1122
Q ss_pred hCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-------cCcccH---------HHHHHcCCcEEEcCCCC
Q 015784 270 IEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-------LGFAPI---------KEMLHADICVSLGTDGA 333 (400)
Q Consensus 270 ~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-------~~~~~~---------~~~~~~Gv~v~~gtD~~ 333 (400)
...+ .+..+.|... .+.++.+++.|+.+.+||...+-- .-.+|+ .+.+.. ..+++|||.
T Consensus 187 ~~~~-~~lhi~HvSt--~~~v~~ak~~gvt~Ev~pHhL~l~~~~~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHa 261 (392)
T PRK00369 187 VKDY-QNVHITHASN--PRTVRLAKELGFTVDITPHHLLVNGEKDCLTKVNPPIRDINERLWLLQALSE--VDAIASDHA 261 (392)
T ss_pred HHHh-CCEEEEECCC--HHHHHHHHHCCCeEEechhHheeccCCCCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCC
Confidence 2222 3444444443 456777888899999999853311 001222 333444 779999998
Q ss_pred CCCCC---CCHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 334 PSNNR---MSIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 334 ~~~~~---~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
|.... .+++. +......+.. ....+++++++++++|.|||+++|+.. |.|++|+.|
T Consensus 262 P~~~~~K~~~f~~~~~Gi~GlE~~lpll~~~---------v~~~~lsl~~~v~~~s~nPA~ilgl~~--g~i~~G~~A 328 (392)
T PRK00369 262 PHSSFEKLQPYEVCPPGIAALSFTPPFIYTL---------VSKGILSIDRAVELISTNPARILGIPY--GEIKEGYRA 328 (392)
T ss_pred CCCHHHccCCHhhCCCCCeeHHHHHHHHHHH---------HHcCCCCHHHHHHHHHHHHHHHhCCCC--CccCCCCcc
Confidence 75211 01110 1111111110 123459999999999999999999963 889999986
|
|
| >TIGR01430 aden_deam adenosine deaminase | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-17 Score=151.46 Aligned_cols=243 Identities=19% Similarity=0.217 Sum_probs=169.9
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--cC---------------CHHHHHHHHHHcCC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQ---------------HVSEMAKAVELLGL 162 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~~---------------~~~~~~~~~~~~g~ 162 (400)
..++.+|+....|+.....+.++.+..++..+.++++.||| +.++. +. ..+.+.+...+.|+
T Consensus 47 ~~~l~~~l~~~~~~~~~~~t~e~l~~~~~~~~~e~~~~Gv~-y~E~r~~p~~~~~~g~~~~~~~~~~~~~i~~a~~~~gi 125 (324)
T TIGR01430 47 FRDLQDFLAKYDFGVEVLRTEDDFKRLAYEYVEKAAKDGVV-YAEVFFDPQLHTNRGISPDTVVEAVLDGLDEAERDFGI 125 (324)
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCE-EEEEEeCccccccCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 35677899888888777788889888888899999999995 55431 11 11234455667788
Q ss_pred eEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc-cccCCHHHHHHHHHHHHHcCCeeeE
Q 015784 163 RACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-IMNATDRLLLETRDMAREFKTGIHM 241 (400)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~e~l~~~~~~a~~~~~~v~~ 241 (400)
+..+..+.+... .........+...++.. +..+. ++... ....+++.+..+++.|++.|+++.+
T Consensus 126 ~~~li~~~~r~~-----------~~~~~~~~~~~~~~~~~--~~vvg--~~l~~~e~~~~~~~~~~~~~~A~~~g~~i~~ 190 (324)
T TIGR01430 126 KSRLILCGMRHK-----------QPEAAEETLELAKPYKE--QTIVG--FGLAGDERGGPPPDFVRAFAIARELGLHLTV 190 (324)
T ss_pred eEEEEEEEeCCC-----------CHHHHHHHHHHHHhhcc--CcEEE--ecCCCCCCCCCHHHHHHHHHHHHHCCCCeEE
Confidence 876655554321 11223333333333221 12232 23332 2345688899999999999999999
Q ss_pred ecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCCeEEECcccccccc---C--cc
Q 015784 242 HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRML---G--FA 314 (400)
Q Consensus 242 H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~~---~--~~ 314 (400)
|+.|+..... ....+...|. ..+.|+.++ ++++++.++++|+.+++||.+|+.+. + ..
T Consensus 191 Ha~E~~~~~~-----------~~~~~~~~g~----~ri~Hg~~l~~~~~~i~~l~~~gi~v~~cP~Sn~~l~~~~~~~~~ 255 (324)
T TIGR01430 191 HAGELGGPES-----------VREALDDLGA----TRIGHGVRALEDPELLKRLAQENITLEVCPTSNVALGVVKSLAEH 255 (324)
T ss_pred ecCCCCChHH-----------HHHHHHHcCc----hhcchhhhhccCHHHHHHHHHcCceEEECCcccccccccCCcccC
Confidence 9998732111 1122223333 247899998 56789999999999999999998752 3 67
Q ss_pred cHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 315 ~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
|+++|+++|++|++|||++..+. .++++++..+.... +++++| |+++|.|+++.+.+++
T Consensus 256 pi~~l~~~Gv~v~igTD~~~~~~-~~l~~e~~~a~~~~--------------~l~~~e-l~~~~~na~~~~f~~~ 314 (324)
T TIGR01430 256 PLRRFLEAGVKVTLNSDDPAYFG-SYLTEEYEIAAKHA--------------GLTEEE-LKQLARNALEGSFLSD 314 (324)
T ss_pred hHHHHHHCCCEEEECCCCCcccC-CCHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHhCCCH
Confidence 99999999999999999986643 48999999887432 499999 8899999999887653
|
This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase. |
| >COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=8e-18 Score=145.84 Aligned_cols=316 Identities=19% Similarity=0.223 Sum_probs=185.8
Q ss_pred CCCCCCCCCCC-CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh--hh---hccCCCcEEeCCCcEe
Q 015784 5 SSGGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--QQ---FSQMADQIIDLQSQIL 78 (400)
Q Consensus 5 ~~~~~~~~~~~-~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~--~~---~~~~~~~viD~~g~~v 78 (400)
+.|+++++... ....+++|+|+.|++-. . +-+.+|.|+||||++||+..... .+ .-...+++|.++|++|
T Consensus 52 RdGMgqs~~~~~~~~~D~VITNa~IiD~~---G-i~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~ 127 (568)
T COG0804 52 RDGMGQSQRLTRAGALDLVITNALIIDYW---G-IVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIV 127 (568)
T ss_pred ccccCcCccccccCcccEEEeeeEEEecc---c-eEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEE
Confidence 34555554443 34568999999999753 2 35789999999999999764311 10 1134578999999999
Q ss_pred eecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC------------
Q 015784 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG------------ 146 (400)
Q Consensus 79 ~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~------------ 146 (400)
.-|-||.|+|+.. + + .++.+|.+|+||+.--+
T Consensus 128 TAGGiDtHiHfI~------------------------P----q--------qi~~Al~sGiTtmiGGGtGpa~Gt~aTT~ 171 (568)
T COG0804 128 TAGGIDTHIHFIC------------------------P----Q--------QIEEALASGITTMIGGGTGPADGTNATTC 171 (568)
T ss_pred eeccccceeEEec------------------------H----H--------HHHHHHhcCcEEEecCccCCCCCcccccc
Confidence 9999999999954 1 0 12558999999998532
Q ss_pred ---cCCHHHHHHHHHHcCCeEEE-ecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCH
Q 015784 147 ---GQHVSEMAKAVELLGLRACL-VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD 222 (400)
Q Consensus 147 ---~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (400)
..+...+++++....++.-+ +.+.- . .+ ....+.+ .. +.+. +..|..+..++
T Consensus 172 TpG~w~i~rMl~a~d~~p~N~g~lgKGn~-s-----------~~----~~L~Eqi---~a---Ga~G--lKlHEDWG~Tp 227 (568)
T COG0804 172 TPGPWHIARMLQAADGLPMNIGFLGKGNA-S-----------NP----APLAEQI---EA---GAIG--LKLHEDWGATP 227 (568)
T ss_pred cCCHHHHHHHHHhhhcCceeeEEeecCCC-C-----------Cc----hhHHHHH---hh---ccce--eEeecccCCCH
Confidence 12345667777666655422 21110 0 01 1122222 11 2222 45677788899
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC-------ChhHHHHHHh
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-------NHTEIGLLSR 295 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-------~~~~i~~~~~ 295 (400)
..+...+..|.+++++|.+|.+. ..+-.++.. .+..+. .| ..|..|. .++-++....
T Consensus 228 aaI~~~L~VAD~~DvqVaiHtDT-LNEsGfvEd----------Ti~A~~---gR--tIHtyHtEGAGGGHAPDiikv~~~ 291 (568)
T COG0804 228 AAIDTCLSVADEYDVQVAIHTDT-LNESGFVED----------TIAAIK---GR--TIHTYHTEGAGGGHAPDIIKVAGQ 291 (568)
T ss_pred HHHHHHHhhhhhhceEEEEeecc-cccccchHh----------HHHHhc---Cc--eeEEeeccCCCCCCccHHHHHccC
Confidence 99999999999999999999753 222111111 011100 01 1122221 1222333322
Q ss_pred cCCeE-EECcc---------------------------------ccccccCcccHHHHHHcCCcEEEcCCCCCCCCCCC-
Q 015784 296 AGVKV-SHCPA---------------------------------SAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS- 340 (400)
Q Consensus 296 ~~~~~-~~~p~---------------------------------~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~- 340 (400)
.++.. +..|. |-.|.+.++.-.-|++-|+.-.++||+........
T Consensus 292 ~NvLPsSTNPT~PytvNT~~EhlDMlMVcHhL~p~ipeDvaFAeSRIR~eTIAAEdiLhDmGafSmisSDSQAMGRvGEv 371 (568)
T COG0804 292 PNVLPSSTNPTRPYTVNTIDEHLDMLMVCHHLDPRIPEDVAFAESRIRPETIAAEDILHDMGAFSMISSDSQAMGRVGEV 371 (568)
T ss_pred CCcCcCCCCCCCCcccccHHHhhhhhhhhccCCCCCcchhhhhhhccchhhhhHHHHHhhccceEEeccchHhhhccchh
Confidence 33221 11111 11111233344558888999999999875433222
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+.++.+-.+.+.+..+.........+-....+..+|.|||..-|+++.+||+|+||.|
T Consensus 372 i~RtwQtA~kmK~qrG~L~~d~~~nDN~RvkRYiaKyTINPAIthGis~~vGSvEvGK~A 431 (568)
T COG0804 372 ITRTWQTADKMKKQRGALPEDAGGNDNFRVKRYIAKYTINPAITHGISHEVGSVEVGKLA 431 (568)
T ss_pred hhhHHHHHHHHHHhcCCCCCCCCCCccHHHhhhhhheecCHHHhcccchhccceecccee
Confidence 334444444333323222222121233567788999999999999999999999999987
|
|
| >cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.3e-17 Score=149.95 Aligned_cols=255 Identities=19% Similarity=0.218 Sum_probs=142.3
Q ss_pred cEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-----CH
Q 015784 76 QILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HV 150 (400)
Q Consensus 76 ~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-----~~ 150 (400)
++|+||+||+|+|+.... .....++....+ ++++.+|+|++.+|... ..
T Consensus 1 ~~vlPG~iD~HvH~r~pg----------------------~~~~~e~~~t~t----~aA~~GG~Ttv~~mpn~~p~~~~~ 54 (337)
T cd01302 1 LLVLPGFIDIHVHLRDPG----------------------GTTYKEDFESGS----RAAAAGGVTTVIDMPNTGPPPIDL 54 (337)
T ss_pred CEecCCeeEeeeccCCCC----------------------CCCchhHHHHHH----HHHHhCCCcEEEECCCCCCCCCcH
Confidence 579999999999996510 001223333333 67899999999998632 22
Q ss_pred HHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc-c-ccCCHHHHHHH
Q 015784 151 SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ-I-MNATDRLLLET 228 (400)
Q Consensus 151 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~e~l~~~ 228 (400)
+..........-+...-....... . ....+.+..++ ...+...++.++.... . ...+.+.+.++
T Consensus 55 ~~~~~~~~~a~~~~~~d~~~~~~~---~-------~~~~~~el~~l----~~~Gv~g~K~f~~~~~~~~~~~~~~~l~~~ 120 (337)
T cd01302 55 PAIELKIKLAEESSYVDFSFHAGI---G-------PGDVTDELKKL----FDAGINSLKVFMNYYFGELFDVDDGTLMRT 120 (337)
T ss_pred HHHHHHHHHhCcCcEeeEEEEEec---c-------CccCHHHHHHH----HHcCCcEEEEEEeccCCCccccCHHHHHHH
Confidence 222222222221111111111000 0 00112222222 2222334565443221 1 15677889999
Q ss_pred HHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-hHHHHHHhcCCe--EEECcc
Q 015784 229 RDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSRAGVK--VSHCPA 305 (400)
Q Consensus 229 ~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-~~i~~~~~~~~~--~~~~p~ 305 (400)
++.+.+.|+++.+|+. +.+......+ .+..+.|...... +.++.+++.|+. +.+||.
T Consensus 121 ~~~~~~~g~~v~~H~E-----------------r~~~la~~~g---~~l~i~Hiss~~~le~i~~ak~~g~~vt~ev~ph 180 (337)
T cd01302 121 FLEIASRGGPVMVHAE-----------------RAAQLAEEAG---ANVHIAHVSSGEALELIKFAKNKGVKVTCEVCPH 180 (337)
T ss_pred HHHHHhcCCeEEEeHH-----------------HHHHHHHHhC---CcEEEEeCCCHHHHHHHHHHHHCCCcEEEEcChh
Confidence 9999999999999995 1233333333 3455677664322 445666666644 567776
Q ss_pred ccc------c-----------c---cCcccHHHHHHcCCcEEEcCCCCCCCCCC-----CHH--------HHHHHHHHHh
Q 015784 306 SAM------R-----------M---LGFAPIKEMLHADICVSLGTDGAPSNNRM-----SIV--------DEMYLASLIN 352 (400)
Q Consensus 306 ~~~------~-----------~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~-----~~~--------~~~~~~~~~~ 352 (400)
..+ . + .....+...++.|...+++|||.+..... +++ -+..+...+.
T Consensus 181 ~L~l~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~~~~~~a~~G~~g~e~~l~~~~~ 260 (337)
T cd01302 181 HLFLDESMLRLNGAWGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESGKDIWKAPPGFPGLETRLPILLT 260 (337)
T ss_pred hheeCHHHhhCCCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHhccCCCcccCCCCcccHHHHHHHHHH
Confidence 421 0 0 11224455678899999999998652100 111 1122222221
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.. ...+++++++++++|.|||+++|+.++ |+|++|++|
T Consensus 261 ~~---------~~~~i~~~~~~~~~s~~pA~~~gl~~~-g~i~~G~~A 298 (337)
T cd01302 261 EG---------VKRGLSLETLVEILSENPARIFGLYPK-GTIAVGYDA 298 (337)
T ss_pred HH---------HhcCCCHHHHHHHHHHHHHHHcCCCCC-CccccCCcC
Confidence 11 123589999999999999999999764 999999987
|
Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines. |
| >cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.4e-17 Score=145.61 Aligned_cols=143 Identities=16% Similarity=0.194 Sum_probs=105.9
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~ 298 (400)
..+++.++.+++.|+++|+++.+|+.++... ++.....|+. +++|. .+.+.++.+++.|+
T Consensus 159 ~~~~~~~~~iv~~A~~~gl~vasH~d~~~~~--------------v~~a~~~Gv~----~~E~p--~t~e~a~~a~~~G~ 218 (325)
T cd01306 159 AYAPANRSELAALARARGIPLASHDDDTPEH--------------VAEAHELGVV----ISEFP--TTLEAAKAARELGL 218 (325)
T ss_pred hcCHHHHHHHHHHHHHCCCcEEEecCCChHH--------------HHHHHHCCCe----eccCC--CCHHHHHHHHHCCC
Confidence 3456789999999999999999999876543 2222333432 23443 47888999999999
Q ss_pred eEEECccccccc---cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 015784 299 KVSHCPASAMRM---LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375 (400)
Q Consensus 299 ~~~~~p~~~~~~---~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~ 375 (400)
.+++++...++. .+..+++.+++.|+.++++||+.++ +++....... ...+++++++++
T Consensus 219 ~vv~gapn~lrg~s~~g~~~~~~ll~~Gv~~al~SD~~p~----sll~~~~~la--------------~~~gl~l~eAl~ 280 (325)
T cd01306 219 QTLMGAPNVVRGGSHSGNVSARELAAHGLLDILSSDYVPA----SLLHAAFRLA--------------DLGGWSLPEAVA 280 (325)
T ss_pred EEEecCcccccCccccccHhHHHHHHCCCeEEEEcCCCcH----hHHHHHHHHH--------------HHcCCCHHHHHH
Confidence 999886554443 3456889999999999999999754 2332222111 123589999999
Q ss_pred HHhHHHHHHcCCCCCccccccCcCC
Q 015784 376 MATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 376 ~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++|.|||+++|+++ .|+|++|+.|
T Consensus 281 ~aT~nPA~~lGl~d-~G~I~~G~~A 304 (325)
T cd01306 281 LVSANPARAVGLTD-RGSIAPGKRA 304 (325)
T ss_pred HHhHHHHHHcCCCC-CCCcCCCCCC
Confidence 99999999999986 5999999987
|
C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria. |
| >PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.1e-18 Score=151.38 Aligned_cols=90 Identities=32% Similarity=0.469 Sum_probs=62.5
Q ss_pred CCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCC--CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 015784 297 GVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSN--NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 297 ~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
+..+..+|...... ....++++++++|+++++|||+.+.. .+.+++..+...... .++++++|
T Consensus 209 ~~~~~~~p~~~~~~~~~~~~~~~l~~~Gv~~~l~sD~~~~~~~~~~~~~~~~~~~~~~--------------~gl~~~~a 274 (304)
T PF13147_consen 209 GIRFKVLPPLRLDLREDRAALRELLEAGVPVALGSDHAPSSTEGSGDLLHEAMRLAVR--------------AGLSPEEA 274 (304)
T ss_dssp GGGGEESSCHHHHTHHHHHHHHHHHHTTSSEEEEE-BBTTTTTCTTTHHHHHHHHHHH--------------TSSTHHHH
T ss_pred CceeeeCCCccccchhhhHHHHHHHhCCCeEEEEcCCcccccccccccchhhhhHHhh--------------cCCCHHHH
Confidence 33344444433212 34567789999999999999998642 223444433333322 35999999
Q ss_pred HHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 374 LRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 374 l~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++++|.|||++||+++++|+|++||+|
T Consensus 275 l~~~T~~pA~~lgl~~~~G~i~~G~~A 301 (304)
T PF13147_consen 275 LRAATSNPARILGLDDDKGSIAPGKDA 301 (304)
T ss_dssp HHHHTHHHHHHTTBTTTSSSTSTTSB-
T ss_pred HHHHHHHHHHHhCCCCCCccCCCCCCC
Confidence 999999999999998788999999987
|
... |
| >COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.5e-16 Score=136.90 Aligned_cols=211 Identities=12% Similarity=0.089 Sum_probs=112.8
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccc---c
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA---K 95 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~---~ 95 (400)
+.++|+|+.|+++-.. ---++-+|.|+||+|++-..-.+ ...+|||+.|+.||||-+|+|+|+...-. |
T Consensus 3 ~e~~IKNg~V~dPlng-ingE~MDI~vkdGKIVe~sev~~-------~~aKVIDA~gklvm~GGvD~HsHvAG~KvNvGR 74 (575)
T COG1229 3 MEILIKNGIVYDPLNG-INGEKMDICVKDGKIVEESEVSE-------SKAKVIDASGKLVMPGGVDSHSHVAGAKVNVGR 74 (575)
T ss_pred ceEEeecCEEecCccC-CCCceeeEEeecCeEeeeccccc-------ccceEEeccCcEEecCccccccccccccccccc
Confidence 5689999999975321 22367799999999998643221 24799999999999999999999976322 2
Q ss_pred cccCCCChhHhhhhcc-ccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--cCCHHHHHHHHHHcCCeEEEeccccc
Q 015784 96 GIADDVDLMTWLHDRI-WPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--GQHVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 96 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
.+.+......-+.... .+....++....+ ..-.+..+.|+|+++... +...+-..+......+-...+...+.
T Consensus 75 ~~rPed~rk~~~~~~gk~rag~G~svpst~----~~GY~YA~mGYTtv~EaA~Ppl~arHtHEE~~~tPilD~~a~~lfg 150 (575)
T COG1229 75 IMRPEDSRKVVLKKTGKTRAGSGYSVPSTY----KTGYRYAKMGYTTVIEAAIPPLLARHTHEEFRATPILDKAAYPLFG 150 (575)
T ss_pred eeChhhhhhhhhhhcccccccccccccccc----hhhhhhhhccceeEeeccCCccccccchhhhhcccccccccccccc
Confidence 1221111101111111 1111222222111 122567889999999743 22233334444444443333444444
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEE-----------------eeccccccCCH-HHHHHHHHHHHH
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW-----------------FGIRQIMNATD-RLLLETRDMARE 234 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~-e~l~~~~~~a~~ 234 (400)
.+|+.-....+...+.+..-...+++..+.. .++++ -.+-..+..+| |.+..+.+.-.+
T Consensus 151 nNw~vmeYi~egd~ek~aAyvAW~lkatkgy---giKiVNPgG~eaWgwG~NV~sLddpvp~FdiTP~EIi~glaevnE~ 227 (575)
T COG1229 151 NNWFVMEYIREGDMEKAAAYVAWLLKATKGY---GIKIVNPGGVEAWGWGKNVHSLDDPVPYFDITPREIIKGLAEVNER 227 (575)
T ss_pred cchhhhhhhhcCCHHHHHHHHHHHHHhcccc---eEEEECCCCcccccccCCcccccCCCCCcccCHHHHHHHHHHHHHh
Confidence 4433222222223333333333444443332 12221 11112345554 567778888888
Q ss_pred cCCe--eeEecC
Q 015784 235 FKTG--IHMHVA 244 (400)
Q Consensus 235 ~~~~--v~~H~~ 244 (400)
.+++ +|+||.
T Consensus 228 L~lphsIHlH~N 239 (575)
T COG1229 228 LGLPHSIHLHCN 239 (575)
T ss_pred hCCCcceEeccc
Confidence 8988 566665
|
|
| >cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.9e-16 Score=143.67 Aligned_cols=164 Identities=16% Similarity=0.146 Sum_probs=94.8
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh-----cCCCCC------hH-HHHhHhCCCCCCeeeEEecCCCh
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT-----RKVDHG------TV-TFLDKIEFLQNNLLSAHTVWVNH 287 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~-----~~~~~~------~~-~~l~~~~~~~~~~~~~h~~~~~~ 287 (400)
.+...|.++++.+. .++.+|+.+........... +..++- .+ +.+.-....+.+..+.|... .
T Consensus 108 ~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~~~~~~~~~~P~~aE~~av~r~~~la~~~~~~~hi~Hvs~--~ 182 (361)
T cd01318 108 DDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELKGESAHPRIRDAEAAAVATARALKLARRHGARLHICHVST--P 182 (361)
T ss_pred CCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhhhccCCCCcCCHHHHHHHHHHHHHHHHHHCCCEEEEeCCC--H
Confidence 56778888887764 78999996543211111000 000000 11 12222223445666667665 3
Q ss_pred hHHHHHHhc--CCeEEECcccccc-------c----cCccc---------HHHHHHcCCcEEEcCCCCCCCC--------
Q 015784 288 TEIGLLSRA--GVKVSHCPASAMR-------M----LGFAP---------IKEMLHADICVSLGTDGAPSNN-------- 337 (400)
Q Consensus 288 ~~i~~~~~~--~~~~~~~p~~~~~-------~----~~~~~---------~~~~~~~Gv~v~~gtD~~~~~~-------- 337 (400)
+.++.+++. ++.+.+||...+- . .-.+| +.+.+++|...+++|||.|...
T Consensus 183 ~~~~~i~~~k~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~~~~~ 262 (361)
T cd01318 183 EELKLIKKAKPGVTVEVTPHHLFLDVEDYDRLGTLGKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKRKGYP 262 (361)
T ss_pred HHHHHHHHhCCCeEEEeCHHHhhcCHHHHhcCCCeEEEeCCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHccCChh
Confidence 456666655 7889999985220 0 00123 3445888999999999865411
Q ss_pred ----CCCHHHH-HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 338 ----RMSIVDE-MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 338 ----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+..-... +.....+. ...+++++++++++|.|||+++|+.+ +|+|++|++|
T Consensus 263 ~a~~G~~g~e~~l~~~~~~v-----------~~~~l~l~~a~~~~t~nPA~~lgl~~-~G~i~~G~~A 318 (361)
T cd01318 263 AAPSGIPGVETALPLMLTLV-----------NKGILSLSRVVRLTSHNPARIFGIKN-KGRIAEGYDA 318 (361)
T ss_pred hCCCCCccHHHHHHHHHHHH-----------HcCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCcC
Confidence 1110110 11111111 23469999999999999999999976 6999999987
|
This group contains the archeal members of the DHOase family. |
| >KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=125.53 Aligned_cols=328 Identities=16% Similarity=0.145 Sum_probs=174.6
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
+-|.|++|+-.. . +.+.+++|.||||..=-+ +--.-..-+.+.|||.|+++.|||||+.+..+. +
T Consensus 14 lQFtNCrilR~g---~-l~~edlWVR~GRIldpe~---vFFeErt~Ad~riDCgG~IlaPGfIDlQiNGGf--------G 78 (407)
T KOG3892|consen 14 LQFTNCRILRGG---K-LLREDLWVRGGRILDPEK---VFFEERTVADERIDCGGRILAPGFIDLQINGGF--------G 78 (407)
T ss_pred eeeeeeEEeeCC---c-eeehheeEeCCeecCccc---ccceeccchhheeccCCeeecCceEEEEecCcc--------c
Confidence 358999999643 2 345699999999974222 100001124678999999999999999988755 2
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cCCHHHHHHHHH-----HcCCeEEEecccccCC
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQHVSEMAKAVE-----LLGLRACLVQSTMDCG 174 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~~~~~~~~~~~-----~~g~~~~~~~~~~~~~ 174 (400)
.+| .++.++.-.......++.+++|+|++.... ....+...+..- ..+....-..+.+.+|
T Consensus 79 vDF-------------S~dte~~~eGvAlVAr~ll~hGvtsf~Pt~~tsp~~~YHkilP~ip~~~~~p~GaG~LG~HlEG 145 (407)
T KOG3892|consen 79 VDF-------------SQDTEDVGEGVALVARQLLSHGVTSFCPTLVTSPPEVYHKILPQIPVKSGGPHGAGVLGLHLEG 145 (407)
T ss_pred ccc-------------ccchhhhhhhHHHHHHHHHhcCCCcCCCccccCCchhhhhhccccccccCCCCccceeeeeccC
Confidence 221 233344334444466889999999999732 111111111111 1122222234566788
Q ss_pred CCCCcccccCCchHHHHHH-----HHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchh
Q 015784 175 EGLPASWAVRTTDDCIQSQ-----KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYE 249 (400)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~ 249 (400)
++++.+..+..++..+... ..+...|... .+++++. ......-. .++++.....|+.|.+-.. .+.
T Consensus 146 PFIs~~KrG~HPE~~i~s~~~~~~~~l~~tYGsl--eni~IvT-lAPEl~~~----~evi~~lv~~gitVslGHS--~A~ 216 (407)
T KOG3892|consen 146 PFISREKRGAHPEAHIRSFEADAFQDLLATYGSL--ENIRIVT-LAPELGGA----QEVIRALVARGITVSLGHS--VAD 216 (407)
T ss_pred CccChhhcCCCHHHHHhccCccHHHHHHHHhCCc--cceEEEE-ecccccCc----HHHHHHHHhcceEEeeccc--hhc
Confidence 8888888888888877632 2233334443 4566532 11111222 3444555556666654322 111
Q ss_pred hhHHhhhcCCCCChHHHHhHh---------C---------CCCCCe----eeEEecCCChhHHHHHHhc---CCeEEECc
Q 015784 250 NQVVMDTRKVDHGTVTFLDKI---------E---------FLQNNL----LSAHTVWVNHTEIGLLSRA---GVKVSHCP 304 (400)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~~~---------~---------~~~~~~----~~~h~~~~~~~~i~~~~~~---~~~~~~~p 304 (400)
...-....-.+...+.+|... | +...++ ++..+.+..+..++...+. |...+...
T Consensus 217 L~~gE~AV~sGat~ITHLFNAMlpfHHRDPGlvGLLtSd~lp~gr~iyyGiIsDG~HThpaALRIAyrthpqGLvLVTDA 296 (407)
T KOG3892|consen 217 LRAGEDAVWSGATFITHLFNAMLPFHHRDPGLVGLLTSDRLPAGRCIYYGIISDGTHTHPAALRIAYRTHPQGLVLVTDA 296 (407)
T ss_pred cCcHHHHHhccchHHHHHHHhccccccCCCceeEEeecCCCCCCCeEEEEEecCCccCChhHhhhhhhcCCCceEEEecc
Confidence 111111111111233222111 1 111121 5566667666666665553 44444443
Q ss_pred cccccc-cCcccHHHH---HHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHH
Q 015784 305 ASAMRM-LGFAPIKEM---LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 380 (400)
Q Consensus 305 ~~~~~~-~~~~~~~~~---~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~ 380 (400)
..++-+ .+..-+.+. .+.+--...||..... +.-.|-...|... ++.+++.+-||+++|..
T Consensus 297 I~ALGl~~GvH~lGqq~v~Vkgl~A~~aGT~Tl~G-SiApMd~CvRhf~--------------kATgCs~e~AleaAtlh 361 (407)
T KOG3892|consen 297 IPALGLGNGVHTLGQQEVEVKGLTAYVAGTKTLSG-SIAPMDVCVRHFL--------------KATGCSMESALEAATLH 361 (407)
T ss_pred hhhcccccccccccceeEEEcceEEEeeccccccc-cccCcHHHHHHHH--------------HhcCCcHHHHHhhhccC
Confidence 334333 332222111 1111123345544322 1122333333322 24579999999999999
Q ss_pred HHHHcCCCCCccccccCcCC
Q 015784 381 GAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 381 ~A~~lg~~~~~G~i~~G~~A 400 (400)
||+.||+++.+|+|..|.+|
T Consensus 362 PAqlLg~ek~KGTLDfG~dA 381 (407)
T KOG3892|consen 362 PAQLLGLEKSKGTLDFGADA 381 (407)
T ss_pred hHHhhccccccccccccccC
Confidence 99999999999999999886
|
|
| >PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.5e-15 Score=102.30 Aligned_cols=44 Identities=27% Similarity=0.643 Sum_probs=34.5
Q ss_pred EEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCc
Q 015784 43 VFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (400)
Q Consensus 43 i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~ 90 (400)
|+|+||||++|++....+ ....++||++|++|+|||||+|+|+.
T Consensus 1 V~I~~g~I~~v~~~~~~~----~~~~~viD~~g~~v~PG~ID~H~H~~ 44 (68)
T PF13594_consen 1 VLIEDGKIVAVGPDSELP----ADAAEVIDAKGKYVMPGFIDMHTHLG 44 (68)
T ss_dssp EEEETTEEEEEESSCCTT----STCCEEEEETTCEEEE-EEEEEE-TT
T ss_pred CEEECCEEEEeCCCCCCC----CCCCEEEECCCCEEeCCeEeeeeccc
Confidence 789999999996544432 23568999999999999999999985
|
... |
| >COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.56 E-value=3.8e-12 Score=112.00 Aligned_cols=70 Identities=17% Similarity=0.258 Sum_probs=56.7
Q ss_pred CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 16 ~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
++.++++|+++.||++.+... ...+|.|+||+|++|++.... ...+.++||+.|++|.|||||+|+|-..
T Consensus 3 ~~~YD~ViR~g~ifDGtGnp~--f~tdvgIrDGvIaav~kg~~d----g~~~~eevDaagriVaPGFIDvHtHyD~ 72 (579)
T COG3653 3 MVTYDVVIRDGLIFDGTGNPP--FTTDVGIRDGVIAAVAKGALD----GTGCPEEVDAAGRIVAPGFIDVHTHYDA 72 (579)
T ss_pred ceeeeEEEeeceEEeCCCCCc--cccccccccceEEEEeccccc----ccCCCeeecccCcEecccEEEeeecccc
Confidence 456899999999998776644 445999999999999986431 1123489999999999999999999764
|
|
| >cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis | Back alignment and domain information |
|---|
Probab=99.46 E-value=1.7e-11 Score=111.69 Aligned_cols=161 Identities=10% Similarity=0.082 Sum_probs=94.2
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHh-C-CCCCCeeeEEecCCChhHHHHHHhc--
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKI-E-FLQNNLLSAHTVWVNHTEIGLLSRA-- 296 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~-~~~~~~~~~h~~~~~~~~i~~~~~~-- 296 (400)
+.+.+..+++.+.+.|++|.+|+.+........... ...+..+..+ . ..+.+..+.|... .+.++.+++.
T Consensus 111 d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~~~~~~e----~~~~~~~~~lA~~~p~~~v~i~Hvst--~~~~~~i~~ak~ 184 (335)
T cd01294 111 DLEKIYPVLEAMQKLGMPLLVHGEVPDFKIDVLDRE----AKFIPVLEPLAQRFPKLKIVLEHITT--ADAVEYVKSCNE 184 (335)
T ss_pred CHHHHHHHHHHHHHcCCeEEEecCCCcccccchhhH----HHHHHHHHHHHHHcCCCeEEEecccH--HHHHHHHHhCCC
Confidence 457899999999999999999996543211000000 0011111111 1 2244666677653 4555555443
Q ss_pred CCeEEECccccc----cc-c---C-----ccc---------HHHHHHcCCcE-EEcCCCCCCCC----------CCCHHH
Q 015784 297 GVKVSHCPASAM----RM-L---G-----FAP---------IKEMLHADICV-SLGTDGAPSNN----------RMSIVD 343 (400)
Q Consensus 297 ~~~~~~~p~~~~----~~-~---~-----~~~---------~~~~~~~Gv~v-~~gtD~~~~~~----------~~~~~~ 343 (400)
++.+.+||.... .. . + .+| +.+.+..|... .++|||.|... ++..+.
T Consensus 185 ~vt~Et~ph~L~l~~~~~~~~~~g~~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~~~~g~~Gi~~~~ 264 (335)
T cd01294 185 NVAATITPHHLLLTRDDLLGGGLNPHLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKESSCGCAGIFSAP 264 (335)
T ss_pred CcEEEEchhHheeeHHHhcCCCCCCCeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCccccCCCCCccccCHH
Confidence 588888887422 00 0 1 123 33456779888 59999976421 122221
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCc
Q 015784 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~ 398 (400)
.+.... +.. .. .++++++++++++.|||++||+..++|+|.+|.
T Consensus 265 ~~l~~~-~~~---------~~-~~l~l~~~v~~~s~nPA~i~gl~~~kg~i~~~~ 308 (335)
T cd01294 265 IALPYL-AEV---------FE-EHNALDKLEAFASDNGPNFYGLPPNKKTITLVK 308 (335)
T ss_pred HHHHHH-HHH---------Hh-ccCCHHHHHHHHHhHHHHHhCCCCCCCeEEEEe
Confidence 111111 110 01 259999999999999999999988889998874
|
In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric. |
| >cd00443 ADA_AMPD Adenosine/AMP deaminase | Back alignment and domain information |
|---|
Probab=99.43 E-value=3.1e-11 Score=108.07 Aligned_cols=136 Identities=21% Similarity=0.246 Sum_probs=103.2
Q ss_pred CHHHHHHHHHHHHHcC-CeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh--hHHHHHHhcC
Q 015784 221 TDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH--TEIGLLSRAG 297 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~-~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~--~~i~~~~~~~ 297 (400)
+...+...++.+++.| +++.+|+.|.... .........+ ...+.|+..+.+ ++++++++++
T Consensus 151 ~~~~f~~~~~~ar~~g~l~~t~HaGE~~~~--------------~~v~~~~~~~--~~RIgHg~~~~~~p~~~~~l~~~~ 214 (305)
T cd00443 151 PLRDFYSYYEYARRLGLLGLTLHCGETGNR--------------EELLQALLLL--PDRIGHGIFLLKHPELIYLVKLRN 214 (305)
T ss_pred CHHHHHHHHHHHHHcCCcceEEeecCCCCh--------------HHHHHHHHhc--cceeeceEecCCCHHHHHHHHHcC
Confidence 5678889999999999 9999999987431 1111222222 456899999876 9999999999
Q ss_pred CeEEECccccccccC-----cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 015784 298 VKVSHCPASAMRMLG-----FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (400)
Q Consensus 298 ~~~~~~p~~~~~~~~-----~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 372 (400)
+.+.+||.||..+.. ..|+++|+++|+++++|||.+..+.. ++.+++..+.... +++.++
T Consensus 215 i~ie~CP~SN~~~~~~~~~~~hP~~~~~~~G~~v~i~TDd~~~~~~-~l~~E~~~~~~~~--------------~l~~~~ 279 (305)
T cd00443 215 IPIEVCPTSNVVLGTVQSYEKHPFMRFFKAGLPVSLSTDDPGIFGT-SLSEEYSLAAKTF--------------GLTFED 279 (305)
T ss_pred CEEEECcchhhhhcCCCChhhChHHHHHHCCCeEEEeCCCCcccCC-ChHHHHHHHHHHc--------------CcCHHH
Confidence 999999999987622 36999999999999999999876333 8889988876443 488888
Q ss_pred HHHHHhHHHHHHcCCC
Q 015784 373 VLRMATINGAKSVLWD 388 (400)
Q Consensus 373 al~~~T~~~A~~lg~~ 388 (400)
..+++ .|+-+...++
T Consensus 280 l~~l~-~nsi~~sf~~ 294 (305)
T cd00443 280 LCELN-RNSVLSSFAK 294 (305)
T ss_pred HHHHH-HHHHHHhcCC
Confidence 77665 5555544443
|
Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway. |
| >cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis | Back alignment and domain information |
|---|
Probab=99.29 E-value=3e-10 Score=103.05 Aligned_cols=28 Identities=11% Similarity=0.071 Sum_probs=24.3
Q ss_pred CCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 015784 366 AALPAETVLRMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 366 ~~l~~~~al~~~T~~~A~~lg~~~~~G~ 393 (400)
..+++.+++++.+.|||+++|+..+.|.
T Consensus 259 ~~i~l~~l~~~~s~nPAk~~gl~~~~~~ 286 (344)
T cd01316 259 GRLTIEDIVDRLHTNPKRIFNLPPQSDT 286 (344)
T ss_pred CCCCHHHHHHHHHHhHHHHhCCCCCCCC
Confidence 3599999999999999999999765554
|
Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate. |
| >cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.6e-09 Score=97.13 Aligned_cols=238 Identities=10% Similarity=0.012 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCc-hHHHHHHHHHHH
Q 015784 124 YISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT-DDCIQSQKELYA 198 (400)
Q Consensus 124 ~~~~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 198 (400)
+..+...+.++++.|+|++.+.+.. ......+.++..+++.+...+++.... .+.+..... ....+...+.+.
T Consensus 31 ~~~~~~~~~~~~~~Gvttiv~~~~~~~~~~~~~~~~~~~~~g~~v~~~~G~hp~~~--~~~~~~~~~~~~l~~~~~~~l~ 108 (293)
T cd00530 31 VEAAKEELKRFRAHGGRTIVDATPPGIGRDVEKLAEVARATGVNIVAATGFYKDAF--YPEWVRLRSVEELTDMLIREIE 108 (293)
T ss_pred HHHHHHHHHHHHHcCCCeEEEcCCcccCcCHHHHHHHHHHhCCcEEEecccCCCcc--ChHHHhhCCHHHHHHHHHHHHH
Confidence 4556667788999999999997743 456677788888887766655543211 111111111 111111111111
Q ss_pred H-hccCC--CCCeEEEeecc-ccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCC
Q 015784 199 K-HHHAA--DGRIRIWFGIR-QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (400)
Q Consensus 199 ~-~~~~~--~~~~~~~~~~~-~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 274 (400)
. +.... .+.++- ++.. .......+.++..+++|++.|+||++|+.+..... ...++.+...+...
T Consensus 109 ~~~~~~~i~~~~IGE-igld~~~~~~q~~~f~~~~~lA~~~~~Pv~iH~~~~~~~~----------~~~l~~l~~~g~~~ 177 (293)
T cd00530 109 EGIEGTGIKAGIIKE-AGGSPAITPLEEKVLRAAARAQKETGVPISTHTQAGLTMG----------LEQLRILEEEGVDP 177 (293)
T ss_pred hccccCCcCceEEEE-eecCCCCCHHHHHHHHHHHHHHHHHCCeEEEcCCCCcccc----------HHHHHHHHHcCCCh
Confidence 1 11110 011211 2222 12223334688999999999999999997641110 11556667767655
Q ss_pred CCeeeEEecC-CChhHHHHHHhcCCeEEECcccccc---c----cCcccHHHHHHcCC--cEEEcCCCCCCCCC------
Q 015784 275 NNLLSAHTVW-VNHTEIGLLSRAGVKVSHCPASAMR---M----LGFAPIKEMLHADI--CVSLGTDGAPSNNR------ 338 (400)
Q Consensus 275 ~~~~~~h~~~-~~~~~i~~~~~~~~~~~~~p~~~~~---~----~~~~~~~~~~~~Gv--~v~~gtD~~~~~~~------ 338 (400)
.+.++.|+.. -+.+.++.+.+.|+.+.++...... . .....++++++.|. ++.++||.+...+.
T Consensus 178 ~~~vi~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~d~ill~TD~p~~~~~~~~~~~ 257 (293)
T cd00530 178 SKVVIGHLDRNDDPDYLLKIAALGAYLEFDGIGKDKIFGYPSDETRADAVKALIDEGYGDRLLLSHDVFRKSYLEKRYGG 257 (293)
T ss_pred hheEEeCCCCCCCHHHHHHHHhCCCEEEeCCCCcccccCCCCHHHHHHHHHHHHHCCCcCCEEEeCCcCchhhhhhccCC
Confidence 5668899984 4678899999999988776433221 0 11234677888886 77999998742110
Q ss_pred CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 339 MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
-.+..-+.......+ ..+++.+++.++.+.||+++|
T Consensus 258 ~~~~~~~~~~~~~~~-----------~~g~~~e~i~~~~~~N~~~lf 293 (293)
T cd00530 258 HGYDYILTRFIPRLR-----------ERGVTEEQLDTILVENPARFL 293 (293)
T ss_pred CChHHHHHHHHHHHH-----------HcCCCHHHHHHHHHHCHHHhC
Confidence 011111222222211 346899999999999999875
|
PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active. |
| >PTZ00124 adenosine deaminase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.7e-09 Score=96.78 Aligned_cols=136 Identities=15% Similarity=0.196 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCc--hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCC
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIP--YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGV 298 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~ 298 (400)
..+..+++.|++.|+++.+|++|.. ..... ..+.+..++. ..+.|+..+ +++.++.++++++
T Consensus 206 ~~f~~~f~~Ar~~Gl~~t~HaGE~~~~~~~~~----------v~~ai~~l~~----~RIGHG~~~~~d~~l~~~l~~~~I 271 (362)
T PTZ00124 206 KPFKDIFDYVREAGVNLTVHAGEDVTLPNLNT----------LYSAIQVLKV----KRIGHGIRVAESQELIDMVKEKDI 271 (362)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCCCCCcchh----------HHHHHHHhCC----CccccccccCCCHHHHHHHHHcCC
Confidence 4578888999999999999999852 11110 1222333332 457899987 5788999999999
Q ss_pred eEEECcccccccc-----CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 015784 299 KVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 299 ~~~~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
.+.+||.||.... ...|++.|+++|++|+++||.+.. .+.++.+|+..+... .+++.++.
T Consensus 272 ~lEvCPtSN~~~~~v~~~~~HPi~~l~~~Gv~v~InTDDp~~-~~t~l~~Ey~~~~~~--------------~gls~~~l 336 (362)
T PTZ00124 272 LLEVCPISNVLLNNAKSMDTHPIRKLYDAGVKVSVNSDDPGM-FLTNINDDYEELYTH--------------LNFTLADF 336 (362)
T ss_pred eEEECCcchhhhhcCCchhhHHHHHHHHCCCcEEEeCCCccc-cCCChhHHHHHHHHH--------------cCCCHHHH
Confidence 9999999998652 235899999999999999999865 334677887776532 35999998
Q ss_pred HHHHhHHHHHHcCCC
Q 015784 374 LRMATINGAKSVLWD 388 (400)
Q Consensus 374 l~~~T~~~A~~lg~~ 388 (400)
.+++ .|+.++.-++
T Consensus 337 ~~l~-~nai~asF~~ 350 (362)
T PTZ00124 337 MKMN-EWALEKSFLD 350 (362)
T ss_pred HHHH-HHHHHHhcCC
Confidence 8874 4554444333
|
|
| >cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase | Back alignment and domain information |
|---|
Probab=99.18 E-value=4.2e-09 Score=95.46 Aligned_cols=146 Identities=13% Similarity=0.090 Sum_probs=99.9
Q ss_pred CCHHHHHHHHHHHHHcC--CeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHh
Q 015784 220 ATDRLLLETRDMAREFK--TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSR 295 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~--~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~ 295 (400)
.+++.+..+++.|++.| +++.+|+.|......... .+..+.+ .++ ...|.|+..+. ++.++.+++
T Consensus 176 ~~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~~~~~~~------~~v~~al-~lg----~~RIGHG~~~~~dp~ll~~l~~ 244 (345)
T cd01321 176 RPLLDFLPQLLWFPKQCAEIPFFFHAGETNGDGTETD------ENLVDAL-LLN----TKRIGHGFALPKHPLLMDLVKK 244 (345)
T ss_pred CCHHHHHHHHHHHHHhCCCCceEeecCCCcCCCCCCh------hHHHHHH-HhC----CCcCccccccCcCHHHHHHHHH
Confidence 45678889999999999 999999998752100000 0012222 222 24578999874 788999999
Q ss_pred cCCeEEECcccccccc-----CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 015784 296 AGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (400)
Q Consensus 296 ~~~~~~~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (400)
+++.+.+||.||.... ...|+++|+++|++|+++||.+......++..+...+.... ...+++.
T Consensus 245 ~~I~lEvCPtSN~~~~~v~~~~~HPl~~ll~~Gv~vtinTDDp~~f~t~~l~~Ey~~~~~~~-----------g~~~l~~ 313 (345)
T cd01321 245 KNIAIEVCPISNQVLGLVSDLRNHPAAALLARGVPVVISSDDPGFWGAKGLSHDFYQAFMGL-----------APADAGL 313 (345)
T ss_pred cCCeEEECcchhhhhccccchhhChHHHHHHCCCeEEEeCCCcchhCCCCchHHHHHHHHHh-----------ccCCCCH
Confidence 9999999999998652 23599999999999999999986533226777776654321 1123888
Q ss_pred HHHHHHHhHHHHHHcCCC
Q 015784 371 ETVLRMATINGAKSVLWD 388 (400)
Q Consensus 371 ~~al~~~T~~~A~~lg~~ 388 (400)
++..++ +.|+.++..++
T Consensus 314 ~~l~~l-~~nsi~~sF~~ 330 (345)
T cd01321 314 RGLKQL-AENSIRYSALS 330 (345)
T ss_pred HHHHHH-HHHHHHHHCCC
Confidence 886554 55665555444
|
|
| >PRK09875 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.6e-07 Score=82.67 Aligned_cols=240 Identities=13% Similarity=0.045 Sum_probs=149.3
Q ss_pred HHHHHHHHHHHHhcCcceeeccC----cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHH
Q 015784 124 YISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199 (400)
Q Consensus 124 ~~~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (400)
+..+...+..+.+.|..|+.+.. +..+..+.+.+++.|++.+.+.+++...+ .|......+.++..+...+.+..
T Consensus 33 ~~~~~~el~~~~~~Gg~tiVd~T~~g~GRd~~~l~~is~~tgv~Iv~~TG~y~~~~-~p~~~~~~~~e~la~~~i~ei~~ 111 (292)
T PRK09875 33 YAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAF-FPEHVATRSVQELAQEMVDEIEQ 111 (292)
T ss_pred HHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHhCCcEEEcCcCCCCcc-CCHHHhcCCHHHHHHHHHHHHHH
Confidence 34445566778888999999864 35678889999999999988877775442 34444333344333333333333
Q ss_pred hccC---CCCCe-EEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCC
Q 015784 200 HHHA---ADGRI-RIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (400)
Q Consensus 200 ~~~~---~~~~~-~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 275 (400)
.... ..+.+ ++............+.++.+.+.+++.|.+|.+|........+ .++.+.+.|+.-.
T Consensus 112 Gi~gt~ikaGvIGeiG~~~~~it~~E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~g~e-----------~l~il~e~Gvd~~ 180 (292)
T PRK09875 112 GIDGTELKAGIIAEIGSSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLE-----------QLALLQAHGVDLS 180 (292)
T ss_pred hhccCCCcccEEEEEecCCCCCCHHHHHHHHHHHHHHHHHCCcEEEcCCCccchHH-----------HHHHHHHcCcCcc
Confidence 2221 12333 2211111112222346788888899999999999754332111 4577788888777
Q ss_pred CeeeEEecCC-ChhHHHHHHhcCCeEEECccc-c-ccc--cCcccHHHHHHcC--CcEEEcCCCCCCC-----CCCCHHH
Q 015784 276 NLLSAHTVWV-NHTEIGLLSRAGVKVSHCPAS-A-MRM--LGFAPIKEMLHAD--ICVSLGTDGAPSN-----NRMSIVD 343 (400)
Q Consensus 276 ~~~~~h~~~~-~~~~i~~~~~~~~~~~~~p~~-~-~~~--~~~~~~~~~~~~G--v~v~~gtD~~~~~-----~~~~~~~ 343 (400)
+.++.|.... +.+.++++++.|+.+.++-.. . +.. .....++.+.+.| =++.+++|..... .+..+-.
T Consensus 181 rvvi~H~d~~~d~~~~~~l~~~G~~l~fD~~g~~~~~pd~~r~~~i~~L~~~Gy~drilLS~D~~~~~~~~~~gg~G~~~ 260 (292)
T PRK09875 181 RVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDY 260 (292)
T ss_pred eEEEeCCCCCCCHHHHHHHHHcCCEEEeccCCCcccCCHHHHHHHHHHHHhcCCCCeEEEeCCCCCcccccccCCCChhH
Confidence 8999999754 567789999999998875221 1 000 1234567788888 4788999975321 1222223
Q ss_pred HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
-+.......+ +.|++.+++=++.-.||+++|+
T Consensus 261 i~~~~ip~L~-----------~~Gvse~~I~~m~~~NP~r~~~ 292 (292)
T PRK09875 261 LLTTFIPQLR-----------QSGFSQADVDVMLRENPSQFFQ 292 (292)
T ss_pred HHHHHHHHHH-----------HcCCCHHHHHHHHHHCHHHHhC
Confidence 3333332221 4479999999999999999874
|
|
| >TIGR00010 hydrolase, TatD family | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.9e-08 Score=83.67 Aligned_cols=214 Identities=11% Similarity=0.051 Sum_probs=119.0
Q ss_pred HHHHhcCcceeeccCcC--CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeE
Q 015784 132 IELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (400)
+.+...|++++..++.. ..+.+.+.++..+ +.+...++.. .+........+++..+.+ .. ..+.
T Consensus 22 ~~~~~~Gv~~~v~~~~~~~~~~~~~~~~~~~~-~i~~~~GihP-------~~~~~~~~~~~~~l~~~l----~~--~~~~ 87 (252)
T TIGR00010 22 ERAKAAGVTAVVAVGTDLEDFLRALELAEKYP-NVYAAVGVHP-------LDVDDDTKEDIKELERLA----AH--PKVV 87 (252)
T ss_pred HHHHHcCCCEEEEecCCHHHHHHHHHHHHHCC-CEEEEEEeCc-------chhhcCCHHHHHHHHHHc----cC--CCEE
Confidence 44667899999976532 2344566666777 6555444332 111111122223333222 11 1222
Q ss_pred EE--eeccccccC-----CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEe
Q 015784 210 IW--FGIRQIMNA-----TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 282 (400)
Q Consensus 210 ~~--~~~~~~~~~-----~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~ 282 (400)
.+ .+....... ..+.+...++.|++.|++|.+|+...... .++.+...+ ....++.|.
T Consensus 88 ~iGEiGld~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~~--~~~~~i~H~ 152 (252)
T TIGR00010 88 AIGETGLDYYKADEYKRRQEEVFRAQLQLAEELNLPVIIHARDAEED-------------VLDILREEK--PKVGGVLHC 152 (252)
T ss_pred EEEecccCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEecCccHH-------------HHHHHHhcC--CCCCEEEEc
Confidence 11 222211111 23678888999999999999999754332 334555544 123556688
Q ss_pred cCCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHcC--CcEEEcCCCCCCCC-----CCCHHHHHHH-HHHHhcc
Q 015784 283 VWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN-----RMSIVDEMYL-ASLINKG 354 (400)
Q Consensus 283 ~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G--v~v~~gtD~~~~~~-----~~~~~~~~~~-~~~~~~~ 354 (400)
..-+.+.+..+.+.|+.+.+...... .....++++++.. =++.++||.+...+ ..+....+.. ...+.+
T Consensus 153 ~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~i~~~~~dril~~TD~p~~~~~~~~~~~~~p~~i~~~~~~~a~- 229 (252)
T TIGR00010 153 FTGDAELAKKLLDLGFYISISGIVTF--KNAKSLREVVRKIPLERLLVETDSPYLAPVPYRGKRNEPAFVRYTVEAIAE- 229 (252)
T ss_pred cCCCHHHHHHHHHCCCeEeeceeEec--CCcHHHHHHHHhCCHHHeEecccCCCCCCCCCCCCCCCChhHHHHHHHHHH-
Confidence 76667788888889999888754322 1122345555543 38999999863210 0011111111 111111
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
..+++++++.++++.||+++|++
T Consensus 230 ----------~~g~~~~~~~~~~~~N~~~~~~~ 252 (252)
T TIGR00010 230 ----------IKGMDVEELAQITTKNAKRLFGL 252 (252)
T ss_pred ----------HhCcCHHHHHHHHHHHHHHHhCc
Confidence 12599999999999999999975
|
Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity. |
| >PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3 | Back alignment and domain information |
|---|
Probab=99.02 E-value=3.6e-08 Score=90.08 Aligned_cols=225 Identities=19% Similarity=0.211 Sum_probs=128.7
Q ss_pred ChhhHHHHHHHHHHHHHhcCcceeecc---------CcC-CH--------HHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 015784 119 TEEDSYISTLLCGIELIHSGVTCFAEA---------GGQ-HV--------SEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (400)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTt~~~~---------~~~-~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (400)
+.++.+......++++.+.||..+-.. ++. .. ....+..+..++...+.......
T Consensus 72 ~~e~~~~~~~~~l~~~~~dnV~YlElr~~P~~~~~~~~~~~~~~~~~~i~~~~~~a~~~~~i~~~li~~~~R~------- 144 (331)
T PF00962_consen 72 TPEDLRRYAYEVLEDFAEDNVVYLELRFSPQFHAQLGGNLSFDEVVEAIIEGIDRAEKEFGIKVRLIISVLRH------- 144 (331)
T ss_dssp SHHHHHHHHHHHHHHHHHTTEEEEEEEESHHHHHTTTCSSTHHHHHHHHHHHHHHHHHHHTTEEEEEEEEETT-------
T ss_pred cHHHHHHHHHHHHHHHHHcCCeEEEEEeccccccccCCCCCHHHHHHHHHhhhhhcccccccccccccccccc-------
Confidence 555555555566788999999888742 111 11 12234444556555443333221
Q ss_pred cccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCC
Q 015784 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (400)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 260 (400)
.......+..+...++... ..+.+-+.-.. ....+.....+++.+++.|+++.+|++|......
T Consensus 145 ----~~~~~~~~~~~~~~~~~~~--~vvG~dl~g~E-~~~~~~~~~~~~~~a~~~gl~~t~HaGE~~~~~~--------- 208 (331)
T PF00962_consen 145 ----FPDEWAEEIVELASKYPDK--GVVGFDLAGDE-DGGPPLKFAPAFRKAREAGLKLTVHAGETGGPEH--------- 208 (331)
T ss_dssp ----STHHHHHHHHHHHHHTTTT--TEEEEEEESST-TSTTGGGHHHHHHHHHHTT-EEEEEESSSSTHHH---------
T ss_pred ----chHHHHHHHHHHHhhcccc--eEEEEEecCCc-ccCchHHHHHHHhhhcccceeecceecccCCccc---------
Confidence 1333444455555555542 33443222211 2223334778888999999999999998775211
Q ss_pred CChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCCeEEECcccccccc-----CcccHHHHHHcCCcEEEcCCCC
Q 015784 261 HGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGA 333 (400)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~ 333 (400)
..+.+.. ++. ..+.|+..+ +++.++.+++.++.+.+||.||..+. ...|++.++++|++|+++||.+
T Consensus 209 --~~~ai~~---l~~-~RIgHG~~~~~~p~l~~~~~~~~I~iEvcptSN~~~~~~~~~~~hP~~~~~~~gv~v~i~TDd~ 282 (331)
T PF00962_consen 209 --IRDAILL---LGA-DRIGHGVRLIKDPELLELLAERQIPIEVCPTSNVQLGAVPSYEEHPLRKLLDAGVPVSINTDDP 282 (331)
T ss_dssp --HHHHHHT---ST--SEEEE-GGGGGSHHHHHHHHHTT-EEEE-HHHHHHTTSSSTGGG-CHHHHHHTT-EEEE--BSH
T ss_pred --ccchhhh---ccc-eeecchhhhhhhhHHHHHHHHhCCCeeeCCCcCcccceeeecchhHHHHHHHcCCceeccCCCc
Confidence 1122222 222 357999987 46678999999999999999998652 2359999999999999999997
Q ss_pred CCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
.. .+.++..++..+.... ++|.+|..++ ..|+.+...++
T Consensus 283 ~~-~~~~l~~ey~~~~~~~--------------~l~~~~l~~l-~~nsi~~sf~~ 321 (331)
T PF00962_consen 283 GV-FGTTLSDEYYLAAEAF--------------GLSLADLKQL-ARNSIEASFLS 321 (331)
T ss_dssp HH-HT-SHHHHHHHHHHHH--------------T--HHHHHHH-HHHHHHCSSS-
T ss_pred cc-cCCCcHHHHHHHHHHc--------------CCCHHHHHHH-HHHHHHHHcCC
Confidence 43 1234777776665333 3888775554 55676665554
|
5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A .... |
| >cd01310 TatD_DNAse TatD like proteins; E | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.3e-07 Score=82.80 Aligned_cols=137 Identities=14% Similarity=0.102 Sum_probs=86.1
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEE
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~ 301 (400)
.+.++.+++.|++.+++|.+|+...... ..+.+...+ ....++.|+..-+.+.++++.+.|+.+.
T Consensus 107 ~~~~~~~~~~a~e~~~pv~iH~~~~~~~-------------~~~l~~~~~--~~~~~i~H~~~~~~~~~~~~~~~g~~~~ 171 (251)
T cd01310 107 KEVFRAQLELAKELNLPVVIHSRDAHED-------------VLEILKEYG--PPKRGVFHCFSGSAEEAKELLDLGFYIS 171 (251)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhcC--CCCCEEEEccCCCHHHHHHHHHcCCEEE
Confidence 4678889999999999999998754321 334555554 1335566877655678888888999988
Q ss_pred ECccccccccCcccHHHHHHcC--CcEEEcCCCCCCCCC-----CCHHHHHH-HHHHHhcccccccCCCCCCCCCCHHHH
Q 015784 302 HCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNNR-----MSIVDEMY-LASLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~G--v~v~~gtD~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
+.+..... ...-++.+.+.+ -++.++||+|..... .+....+. ....+. ...+++.+++
T Consensus 172 ~~~~~~~~--~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~~~~~~~~~la-----------~~~gl~~e~~ 238 (251)
T cd01310 172 ISGIVTFK--NANELREVVKEIPLERLLLETDSPYLAPVPFRGKRNEPAYVKHVAEKIA-----------ELKGISVEEV 238 (251)
T ss_pred eeeeeccC--CCHHHHHHHHhCChHHEEEcccCCCCCCCCCCCCCCCChhHHHHHHHHH-----------HHHCcCHHHH
Confidence 87654221 111245555544 379999998743110 00100011 111111 0135999999
Q ss_pred HHHHhHHHHHHcC
Q 015784 374 LRMATINGAKSVL 386 (400)
Q Consensus 374 l~~~T~~~A~~lg 386 (400)
.++.+.|++++||
T Consensus 239 ~~~~~~N~~~ll~ 251 (251)
T cd01310 239 AEVTTENAKRLFG 251 (251)
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999986
|
coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity. |
| >PRK05451 dihydroorotase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.1e-07 Score=86.93 Aligned_cols=159 Identities=13% Similarity=0.145 Sum_probs=94.5
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHHh-Hh-CCCCCCeeeEEecCCChhHHHHHHh--
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLD-KI-EFLQNNLLSAHTVWVNHTEIGLLSR-- 295 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~-~~-~~~~~~~~~~h~~~~~~~~i~~~~~-- 295 (400)
+++.+.++++.+.+.|+++.+|+.+......... + ....+ ..+. .. ...+.+..+.|... .+.++.+++
T Consensus 116 dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~~~~---~-e~~~~~~~l~~lA~~~pg~~lhI~Hlst--~~~~e~i~~a~ 189 (345)
T PRK05451 116 DIEKIYPVLEAMQKLGMPLLVHGEVTDPDIDIFD---R-EAVFIDRVLEPLRRRFPKLKIVFEHITT--KDAVDYVREAN 189 (345)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecCCCCccccccc---c-hHHHHHHHHHHHHHhcCCCcEEEEecCc--HHHHHHHHhcC
Confidence 6778999999999999999999875332110000 0 00011 1112 11 22245677777754 444555444
Q ss_pred cCCeEEECccccc----ccc----C-----cc---------cHHHHHHcCCcE-EEcCCCCCCCC--------CCCHHHH
Q 015784 296 AGVKVSHCPASAM----RML----G-----FA---------PIKEMLHADICV-SLGTDGAPSNN--------RMSIVDE 344 (400)
Q Consensus 296 ~~~~~~~~p~~~~----~~~----~-----~~---------~~~~~~~~Gv~v-~~gtD~~~~~~--------~~~~~~~ 344 (400)
.++.+.+||...+ ... + .+ .+.+.+..|... .++|||.|... ..+++..
T Consensus 190 ~~it~Et~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~~~~G~~gi~~~ 269 (345)
T PRK05451 190 DNLAATITPHHLLINRNDMLVGGIRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKESACGCAGIFSA 269 (345)
T ss_pred CCEEEEecHHHHhcCHHHHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhCCCCCCCchhhH
Confidence 3566778887422 000 1 12 344567789888 89999987521 1123331
Q ss_pred H---HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccC
Q 015784 345 M---YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAG 397 (400)
Q Consensus 345 ~---~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G 397 (400)
+ .....+. .. +.++++++++.+.|||++||+..++|+|.+|
T Consensus 270 ~~g~~~~~~~~-----------~~-~~~l~~~v~~~s~nPAkifGl~~~KG~i~~~ 313 (345)
T PRK05451 270 PAALELYAEVF-----------EE-AGALDKLEAFASLNGPDFYGLPRNTDTITLV 313 (345)
T ss_pred HHHHHHHHHHH-----------Hc-CCCHHHHHHHHhHHHHHHhCCCCCCCeEEEE
Confidence 1 1111111 11 2489999999999999999998889999987
|
|
| >COG1816 Add Adenosine deaminase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.94 E-value=1.5e-07 Score=83.71 Aligned_cols=238 Identities=17% Similarity=0.171 Sum_probs=140.0
Q ss_pred HhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeecc-Cc-------CCHH--------HHHHHHHHcCCeEEEec
Q 015784 105 TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA-GG-------QHVS--------EMAKAVELLGLRACLVQ 168 (400)
Q Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~-~~-------~~~~--------~~~~~~~~~g~~~~~~~ 168 (400)
+++..+-+...-..+.++.+.-+......++..|+-..-.. .+ ...+ ......++.|++..+..
T Consensus 65 ~fl~~~y~~~~v~~~~~~~~~la~~~~~~~~~~~~vy~Ei~f~p~~~t~~~l~~~~~~e~~~~~~~~~~~~~gi~s~li~ 144 (345)
T COG1816 65 EFLEKYYRGASVLRTEEDFYRLAYEYLEDAAADNVVYAEIRFDPYLHTKRGLSVDTVVEGLIAGFRPAERDFGIHSKLIV 144 (345)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHHHHHhcCCeEEEEEeCcchhhhccCCHHHHHHHHHHHHHHHhhccCCccceEE
Confidence 33444433333345666767677777788888898877642 11 1111 12233444455443322
Q ss_pred ccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeecc-ccccCCHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIR-QIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
..... ...+......+....+....... .+.. ......++....+++.++++|+.+.+|+.|..
T Consensus 145 ~~~r~-----------~~~e~~~~~~~~a~~~~~~~~~~----~~l~~~e~~~p~~~f~~~f~~~r~~gl~lt~HaGE~~ 209 (345)
T COG1816 145 CLLRH-----------LGFESADEELELALRYRDKLVTG----VGLAGSESGYPPELFVSLFKLARDNGLKLTIHAGEAG 209 (345)
T ss_pred EEEee-----------cCHHHHHHHHHHHhhcccccCcc----CCCCcccccCCHHHHHHHHHHHHHcCceEEEeccccC
Confidence 22211 12222222223233333221111 1211 22445677889999999999999999999654
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCCeEEECccccccc---c--CcccHHHHH
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRM---L--GFAPIKEML 320 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~---~--~~~~~~~~~ 320 (400)
.... ..+.+...+. -.+.|+..+ +++.+.++++.++...+||.||... . ...|+++|+
T Consensus 210 ~~~~-----------i~~al~~~~~----~rI~HGi~~~~d~~L~~~l~~~qI~levCP~SNi~~~~v~~~~~hPf~~~~ 274 (345)
T COG1816 210 GPES-----------IRDALDLLGA----ERIGHGIRAIEDPELLYRLAERQIPLEVCPLSNIQLGVVPSLAKHPFKKLF 274 (345)
T ss_pred CcHH-----------HHHHHHHhch----hhhccccccccCHHHHHHHHHhCCeeEECCcchhhcccccchhhCcHHHHH
Confidence 3211 2233333332 146788875 5677899999999999999999654 2 235999999
Q ss_pred HcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 321 HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 321 ~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
++|++|+++||.+..++ .++..|...+.... +++.+|+-+++ .|+=+.-+++
T Consensus 275 d~Gv~VsLnTDdp~~f~-~~l~~Ey~~aa~~~--------------~l~~~dl~~~a-rnav~~af~~ 326 (345)
T COG1816 275 DAGVKVSLNTDDPLYFG-TPLIEEYLVAAQIY--------------GLSREDLCELA-RNAVEAAFIS 326 (345)
T ss_pred HcCCceEEcCCChhhcC-CchHHHHHHHHHHh--------------CCCHHHHHHHH-HHHHHHccCC
Confidence 99999999999987633 35677777765443 37777765554 4444444443
|
|
| >PLN02599 dihydroorotase | Back alignment and domain information |
|---|
Probab=98.84 E-value=6.7e-07 Score=81.52 Aligned_cols=156 Identities=13% Similarity=0.093 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHH--hHhCCCCCCeeeEEecCCChhHHHHHHh--c
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFL--DKIEFLQNNLLSAHTVWVNHTEIGLLSR--A 296 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l--~~~~~~~~~~~~~h~~~~~~~~i~~~~~--~ 296 (400)
.+.+..+++.+++.|+++.+|+............ ....+ +.+ ......+.+..+.|... .+.++.+++ .
T Consensus 135 ~~~l~~~le~~~e~G~~L~vH~E~~~~~~~~~~~----E~~~i~r~l~~~la~~~g~kI~i~HiSt--~~~ve~v~~ak~ 208 (364)
T PLN02599 135 LGKCLPVLEEMAEQGMPLLVHGEVTDPSVDIFDR----EKVFIDTILAPLVQKLPQLKIVMEHITT--MDAVEFVESCGD 208 (364)
T ss_pred HHHHHHHHHHHHhcCCEEEEecCCCccccccccc----HHHHHHHHHHHHHHhccCCeEEEEecCh--HHHHHHHHhccC
Confidence 5789999999999999999999763321111000 00011 122 12233455666677654 333433332 2
Q ss_pred -CCeEEECccccc------c-------c---------cCcccHHHHHHcCCc-EEEcCCCCCCCC--------CCCHHHH
Q 015784 297 -GVKVSHCPASAM------R-------M---------LGFAPIKEMLHADIC-VSLGTDGAPSNN--------RMSIVDE 344 (400)
Q Consensus 297 -~~~~~~~p~~~~------~-------~---------~~~~~~~~~~~~Gv~-v~~gtD~~~~~~--------~~~~~~~ 344 (400)
++.+.+||...+ . . .....+.+.+..|.. +.+||||.|... ...++..
T Consensus 209 ~~vtae~tpHhL~l~~~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~~~~g~~Gi~~~ 288 (364)
T PLN02599 209 GNVAATVTPQHLLLNRNALFQGGLQPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKEASCGCAGIYSA 288 (364)
T ss_pred CCEEEEecHHHHhcCHHHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhcCCCCCCCcccH
Confidence 577888887422 0 0 011134456677874 899999986411 1112211
Q ss_pred ---HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccc
Q 015784 345 ---MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395 (400)
Q Consensus 345 ---~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~ 395 (400)
+-...... .+.+ ++++++++++.|||+++|+..++|+|.
T Consensus 289 ~~~l~~l~~~~-----------~~~g-~l~~l~~~~S~npA~~~gL~~~kg~i~ 330 (364)
T PLN02599 289 PVALSLYAKAF-----------EEAG-ALDKLEAFTSFNGPDFYGLPRNTSTIT 330 (364)
T ss_pred HHHHHHHHHHH-----------HhcC-CHHHHHHHHhHHHHHHhCCCCCCCeEE
Confidence 11111000 1223 789999999999999999975678875
|
|
| >PRK10812 putative DNAse; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.7e-06 Score=72.37 Aligned_cols=139 Identities=13% Similarity=0.068 Sum_probs=90.1
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.++..+++|++.++||.+|+-....+ .++.+...+.... ..+.|+..-+.+.++.+.+.|..+++
T Consensus 111 ~vf~~ql~lA~e~~~Pv~iH~r~a~~~-------------~l~iL~~~~~~~~-~~v~H~fsG~~~~a~~~~~~G~~is~ 176 (265)
T PRK10812 111 ESFRHHIQIGRELNKPVIVHTRDARAD-------------TLAILREEKVTDC-GGVLHCFTEDRETAGKLLDLGFYISF 176 (265)
T ss_pred HHHHHHHHHHHHhCCCeEEEeeCchHH-------------HHHHHHhhcCCCC-CEEEEeecCCHHHHHHHHHCCCEEEE
Confidence 457888899999999999998654432 4455555433222 34589998778889999999999887
Q ss_pred CccccccccCcccHHHHHHcC--CcEEEcCCCCCCCC-----C-CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN-----R-MSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~G--v~v~~gtD~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
.....+ .....++.+.+.. =++.+.||+|...+ . -.+..-...+..+.. -.+++++++.
T Consensus 177 ~g~~t~--~~~~~~~~~~~~ipldrlLlETD~P~~~p~~~~g~~n~P~~i~~v~~~ia~-----------l~g~~~eei~ 243 (265)
T PRK10812 177 SGIVTF--RNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAV-----------LKGVSVEELA 243 (265)
T ss_pred Ceeeec--CccHHHHHHHHhCChhhEEEecCCCCCCCcCCCCCCCCcHHHHHHHHHHHH-----------HhCCCHHHHH
Confidence 643322 2223456666655 37889999873211 0 011111121122211 1258999999
Q ss_pred HHHhHHHHHHcCCC
Q 015784 375 RMATINGAKSVLWD 388 (400)
Q Consensus 375 ~~~T~~~A~~lg~~ 388 (400)
+..+.|+.++++++
T Consensus 244 ~~~~~N~~~lf~~~ 257 (265)
T PRK10812 244 QVTTDNFARLFHID 257 (265)
T ss_pred HHHHHHHHHHHCCC
Confidence 99999999999985
|
|
| >COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.64 E-value=7.7e-06 Score=66.62 Aligned_cols=193 Identities=11% Similarity=0.125 Sum_probs=117.3
Q ss_pred HHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEE-eeccccccCCHHHHHHHHHHHH
Q 015784 155 KAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAR 233 (400)
Q Consensus 155 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~l~~~~~~a~ 233 (400)
..+.+.|++.....+.+..+ .|+ + +....+.+..+... .+-+.+. ++.........+.+++-+++|+
T Consensus 57 ~Ra~~~Gl~~~vavGvHPr~--iP~--------e-~~~~l~~L~~~l~~-e~VvAiGEiGLe~~t~~E~evf~~QL~LA~ 124 (254)
T COG1099 57 ERAEKAGLKLKVAVGVHPRA--IPP--------E-LEEVLEELEELLSN-EDVVAIGEIGLEEATDEEKEVFREQLELAR 124 (254)
T ss_pred hhHHhhCceeeEEeccCCCC--CCc--------h-HHHHHHHHHhhccc-CCeeEeeecccccCCHHHHHHHHHHHHHHH
Confidence 55778888888877766654 122 2 33333334433331 1222221 2333322233456888899999
Q ss_pred HcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCe--EEECcccccccc
Q 015784 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK--VSHCPASAMRML 311 (400)
Q Consensus 234 ~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~--~~~~p~~~~~~~ 311 (400)
+.++|+.+|..........- ..++.+...++.....++.|+ +.+.+..+...+.+ .+++|. ++.
T Consensus 125 e~dvPviVHTPr~nK~e~t~--------~ildi~~~~~l~~~lvvIDH~---N~etv~~vld~e~~vGlTvqPg---Klt 190 (254)
T COG1099 125 ELDVPVIVHTPRRNKKEATS--------KILDILIESGLKPSLVVIDHV---NEETVDEVLDEEFYVGLTVQPG---KLT 190 (254)
T ss_pred HcCCcEEEeCCCCcchhHHH--------HHHHHHHHcCCChhheehhcc---cHHHHHHHHhccceEEEEecCC---cCC
Confidence 99999999997665432211 255777888877777788887 45556666666655 667773 222
Q ss_pred CcccHHHHHHcC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 312 GFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 312 ~~~~~~~~~~~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
....+.-..+.| -++.+.||.... ..+++.-.+.+..+. ..|+..+++-+-+-.|+-+++|+
T Consensus 191 ~~eAveIV~ey~~~r~ilnSD~~s~--~sd~lavprtal~m~------------~~gv~~~~i~kV~~~NA~~~~~l 253 (254)
T COG1099 191 VEEAVEIVREYGAERIILNSDAGSA--ASDPLAVPRTALEME------------ERGVGEEEIEKVVRENALSFYGL 253 (254)
T ss_pred HHHHHHHHHHhCcceEEEecccccc--cccchhhhHHHHHHH------------HhcCCHHHHHHHHHHHHHHHhCc
Confidence 222344445556 689999996532 234544455555443 34688999888888888888876
|
|
| >PRK11449 putative deoxyribonuclease YjjV; Provisional | Back alignment and domain information |
|---|
Probab=98.63 E-value=5.1e-06 Score=72.45 Aligned_cols=137 Identities=11% Similarity=0.068 Sum_probs=87.2
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.+...+++|.++++||.+|+-+...+ .++.+...+. .+..+.|+..=+.+..+.+.+.|..+++
T Consensus 114 ~vf~~ql~lA~~~~~Pv~iH~r~a~~~-------------~~~il~~~~~--~~~~i~H~fsG~~~~a~~~l~~G~~iS~ 178 (258)
T PRK11449 114 WLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDL--PRTGVVHGFSGSLQQAERFVQLGYKIGV 178 (258)
T ss_pred HHHHHHHHHHHHhCCCEEEEecCccHH-------------HHHHHHhcCC--CCCeEEEcCCCCHHHHHHHHHCCCEEEe
Confidence 568888899999999999999764432 4455555442 1245789988888999999999999888
Q ss_pred CccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCCC-----CC-HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNR-----MS-IVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
.+...+. ....++++++. . =++.+.||+|-..+. .+ +..-......+.. -.+++++++.
T Consensus 179 ~g~it~~--~~~~~~~~~~~ipldriL~ETD~P~l~p~~~~~~~n~p~~~~~~~~~ia~-----------l~~~~~~el~ 245 (258)
T PRK11449 179 GGTITYP--RASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFDVLCE-----------LRPEPADEIA 245 (258)
T ss_pred Ccccccc--CcHHHHHHHHhCChhhEEEecCCCCCCCCCCCCCCCCChHHHHHHHHHHH-----------HHCcCHHHHH
Confidence 7654332 11123444332 2 268899999742110 01 1111222211111 1248899999
Q ss_pred HHHhHHHHHHcCC
Q 015784 375 RMATINGAKSVLW 387 (400)
Q Consensus 375 ~~~T~~~A~~lg~ 387 (400)
+..+.|..+++|+
T Consensus 246 ~~~~~N~~~lf~~ 258 (258)
T PRK11449 246 EVLLNNTYTLFNV 258 (258)
T ss_pred HHHHHHHHHHhCc
Confidence 9999999998874
|
|
| >PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3 | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.4e-06 Score=77.34 Aligned_cols=234 Identities=11% Similarity=0.048 Sum_probs=134.3
Q ss_pred HHHHHHHHHHHHhcCcceeeccC----cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHH
Q 015784 124 YISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199 (400)
Q Consensus 124 ~~~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (400)
...+...++.+.+.|..++.|+. +..+..+.+.+++.|++.+.+.+++...+ .+......+.++..+ .++++
T Consensus 37 ~~~~~~El~~~k~~Gg~tiVd~T~~g~GRd~~~l~~is~~tGv~II~~TG~y~~~~-~p~~~~~~s~e~la~---~~i~E 112 (308)
T PF02126_consen 37 VEAAVAELKEFKAAGGRTIVDATPIGLGRDVEALREISRRTGVNIIASTGFYKEPF-YPEWVREASVEELAD---LFIRE 112 (308)
T ss_dssp HHHHHHHHHHHHHTTEEEEEE--SGGGTB-HHHHHHHHHHHT-EEEEEEEE-SGGC-SCHHHHTSHHHHHHH---HHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEecCCcccCcCHHHHHHHHHHhCCeEEEeCCCCcccc-CChhhhcCCHHHHHH---HHHHH
Confidence 44555566778889999999964 35678889999999999988887775432 232222222222111 12222
Q ss_pred hcc-C-----CCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCc-hhhhHHhhhcCCCCChHHHHhHhCC
Q 015784 200 HHH-A-----ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP-YENQVVMDTRKVDHGTVTFLDKIEF 272 (400)
Q Consensus 200 ~~~-~-----~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~ 272 (400)
... . ..+.++...............++.+.+..++.|++|++|+.... ...+ .+++|.+.|+
T Consensus 113 i~~GidgT~ikaG~Ik~~~~~~~it~~E~k~lrAaa~A~~~TG~pI~~H~~~g~~~~~e-----------~~~il~e~Gv 181 (308)
T PF02126_consen 113 IEEGIDGTGIKAGIIKEIGSSNPITPLEEKVLRAAARAHKETGAPISTHTGRGTRMGLE-----------QLDILEEEGV 181 (308)
T ss_dssp HHT-STTSSB-ESEEEEEEBTTBCEHHHHHHHHHHHHHHHHHT-EEEEEESTTGTCHHH-----------HHHHHHHTT-
T ss_pred HHhcCCCCccchhheeEeeccCCCCHHHHHHHHHHHHHHHHhCCeEEEcCCCCCcCHHH-----------HHHHHHHcCC
Confidence 221 1 12344443333222222334678888888889999999997665 2212 5678888898
Q ss_pred CCCCeeeEEecCC-ChhHHHHHHhcCCeEEECccc------c------ccc--cCcccHHHHHHcCC--cEEEcCCCCC-
Q 015784 273 LQNNLLSAHTVWV-NHTEIGLLSRAGVKVSHCPAS------A------MRM--LGFAPIKEMLHADI--CVSLGTDGAP- 334 (400)
Q Consensus 273 ~~~~~~~~h~~~~-~~~~i~~~~~~~~~~~~~p~~------~------~~~--~~~~~~~~~~~~Gv--~v~~gtD~~~- 334 (400)
.-.+.++.|.... +.+.+..+++.|+.+.+--.. . +.. .....+..|.++|. ++.++.|...
T Consensus 182 ~~~rvvigH~D~~~D~~y~~~la~~G~~l~~D~~g~~~~g~~~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~k 261 (308)
T PF02126_consen 182 DPSRVVIGHMDRNPDLDYHRELADRGVYLEFDTIGREFSGKDKNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGRK 261 (308)
T ss_dssp -GGGEEETSGGGST-HHHHHHHHHTT-EEEETTTT-B-TTTTTCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHESE
T ss_pred ChhHeEEeCCCCCCCHHHHHHHHhcCCEEEecCCcccccCcccCccCCCCCHHHHHHHHHHHHHcCCcCcEEEecccccc
Confidence 8889999998853 345678888999998774330 0 000 11235788899985 7999999542
Q ss_pred --C--CC----CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 335 --S--NN----RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 335 --~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
. .. +..+. +....... .+.|++.+++=++...||+++|
T Consensus 262 ~~~~~~gg~g~~~~~i--~~~fiP~L-----------~~~Gv~~~~i~~ilv~NP~r~l 307 (308)
T PF02126_consen 262 SRLYRYGGGGYGYIYI--LTRFIPRL-----------KERGVSEEDIDKILVENPARIL 307 (308)
T ss_dssp EGSSSCCHHHHTTTHH--HHTHHHHH-----------HHTTS-HHHHHHHHTHHHHHHH
T ss_pred ccccccCCCCccHHHH--HHHHHHHH-----------HHcCCCHHHHHHHHHHCHHHHc
Confidence 1 00 11111 11111111 1346999999999999999987
|
1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A .... |
| >TIGR00856 pyrC_dimer dihydroorotase, homodimeric type | Back alignment and domain information |
|---|
Probab=98.55 E-value=1.4e-05 Score=72.79 Aligned_cols=151 Identities=13% Similarity=0.097 Sum_probs=84.1
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHHhH--hCCCCCCeeeEEecCCChhHHHHHHh--
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDK--IEFLQNNLLSAHTVWVNHTEIGLLSR-- 295 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~~--~~~~~~~~~~~h~~~~~~~~i~~~~~-- 295 (400)
+++.+..+++.+++.|+++.+|+.+......... +. ...+ ..+.. ....+.+..+.|... .+-++.+++
T Consensus 113 dd~~l~~~~e~~~e~g~~v~vHaEd~~~~i~~~~---~e-~~a~~~~i~~lA~~~~~~~~~i~H~st--~~~~~~i~~a~ 186 (341)
T TIGR00856 113 DIDAIMPVLEAMEKIGLPLLLHGEVTHGDIDIFD---RE-ARFIESVLEPLRQRFPALKVVLEHITT--KDAIDYVEDGN 186 (341)
T ss_pred CHHHHHHHHHHHHHcCCeEEEeecCCCCCccccc---ch-hhhhHHHHHHHHHHccCCeEEEEecCc--HHHHHHHHHcC
Confidence 4478999999999999999999966421111000 00 0011 12222 112344566666654 333444433
Q ss_pred cCCeEEECccccc----cc-c---C-----ccc---------HHHHHHcCCcE-EEcCCCCCCCC----------CCCHH
Q 015784 296 AGVKVSHCPASAM----RM-L---G-----FAP---------IKEMLHADICV-SLGTDGAPSNN----------RMSIV 342 (400)
Q Consensus 296 ~~~~~~~~p~~~~----~~-~---~-----~~~---------~~~~~~~Gv~v-~~gtD~~~~~~----------~~~~~ 342 (400)
..+...+||...+ .. . + .+| +.+.+..|... .++|||.|... ++.-
T Consensus 187 ~~vt~E~~ph~L~l~~~~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~~~~~~G~~g- 265 (341)
T TIGR00856 187 NRLAATITPQHLMFTRNDLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKESSCGCAGCFS- 265 (341)
T ss_pred CCEEEEEcHHHHhccHHHHhccCCCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCCCCCCCCccc-
Confidence 2366778887422 00 1 0 123 34567789888 69999986521 1111
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 343 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
-+......+.. . ..++++++++++.+.|||+++|+.
T Consensus 266 ~e~~l~~~~~~---------~-~~~~~l~~~v~~~s~nPAk~~gl~ 301 (341)
T TIGR00856 266 APTALPSYAEV---------F-EEMNALENLEAFCSDNGPQFYGLP 301 (341)
T ss_pred HHHHHHHHHHH---------H-hcCCCHHHHHHHHhHhHHHHhCCC
Confidence 11111111110 1 124899999999999999999994
|
This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes. |
| >COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.3e-05 Score=68.98 Aligned_cols=215 Identities=13% Similarity=0.084 Sum_probs=122.1
Q ss_pred HHHHhcCcceeeccCcCC--HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeE
Q 015784 132 IELIHSGVTCFAEAGGQH--VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (400)
..+...|++.+...+... .....+.++... ..+...+++.. . ........+....+.+.. ...+.
T Consensus 24 ~~a~~~gv~~~~~~g~~~~~~~~~~~la~~y~-~v~~~~G~HP~------~-~~~~~~~~~~~l~~~~~~-----~~~vv 90 (256)
T COG0084 24 ARAREAGVKKMVVVGTDLEDFKRALELAEKYP-NVYAAVGVHPL------D-ADEHSEEDLEELEQLAEH-----HPKVV 90 (256)
T ss_pred HHHHHcCCcEEEEeecCHHHHHHHHHHHHhCC-CeEEEEeeCCC------c-cccccHHHHHHHHHHHhc-----CCCeE
Confidence 447778999999877332 334556666655 33322222221 1 111123333344444332 11221
Q ss_pred E--EeeccccccCC------HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEE
Q 015784 210 I--WFGIRQIMNAT------DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH 281 (400)
Q Consensus 210 ~--~~~~~~~~~~~------~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h 281 (400)
. =+++...+... .+.++..+++|++.++|+.+|+-+...+ ..++|...+. ....+.|
T Consensus 91 aIGEiGLDy~~~~~~~~~~Q~~~F~~ql~lA~~~~lPviIH~R~A~~d-------------~~~iL~~~~~--~~~gi~H 155 (256)
T COG0084 91 AIGEIGLDYYWDKEPDKERQEEVFEAQLELAKELNLPVIIHTRDAHED-------------TLEILKEEGA--PVGGVLH 155 (256)
T ss_pred EEEecccCccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccccHHH-------------HHHHHHhcCC--CCCEEEE
Confidence 1 13343333222 2457888899999999999999765543 5566666554 3456889
Q ss_pred ecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC----C-CC-HHHHHHHHHHHhc
Q 015784 282 TVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN----R-MS-IVDEMYLASLINK 353 (400)
Q Consensus 282 ~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~----~-~~-~~~~~~~~~~~~~ 353 (400)
|..=+.+..+++.+.|..+++.+...++- -..++++.+. . =++.+=||+|-..+ + .+ +..-...+..+..
T Consensus 156 cFsGs~e~a~~~~d~G~yisisG~itfk~--a~~~~ev~~~iPldrLL~ETDsPyl~P~p~rGkrNeP~~v~~v~~~iAe 233 (256)
T COG0084 156 CFSGSAEEARKLLDLGFYISISGIVTFKN--AEKLREVARELPLDRLLLETDAPYLAPVPYRGKRNEPAYVRHVAEKLAE 233 (256)
T ss_pred ccCCCHHHHHHHHHcCeEEEECceeecCC--cHHHHHHHHhCCHhHeEeccCCCCCCCcCCCCCCCCchHHHHHHHHHHH
Confidence 99989999999999999988887765542 1112222111 1 14668899873211 0 00 1111112222221
Q ss_pred ccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 354 GREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 354 ~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
-.+++++++.+..|.|.-+++++
T Consensus 234 -----------lk~~~~eeva~~t~~N~~~lf~~ 256 (256)
T COG0084 234 -----------LKGISAEEVAEITTENAKRLFGL 256 (256)
T ss_pred -----------HhCCCHHHHHHHHHHHHHHHhcC
Confidence 12589999999999999888874
|
|
| >KOG1097 consensus Adenine deaminase/adenosine deaminase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.52 E-value=1.4e-05 Score=71.60 Aligned_cols=228 Identities=17% Similarity=0.182 Sum_probs=130.3
Q ss_pred hhHHHHHHHHHHHHHhcCcceeecc---------CcCC---------HHHHHHHHHHcCCeEEEecccccCCCCCCcccc
Q 015784 121 EDSYISTLLCGIELIHSGVTCFAEA---------GGQH---------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWA 182 (400)
Q Consensus 121 ~~~~~~~~~~~~~~l~~GvTt~~~~---------~~~~---------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 182 (400)
+.++......++.+...||..+-.. .+.. .+...+..+..|+...+-.+++..-
T Consensus 117 ~~~~~~~y~~~eef~~dgVvY~E~Rt~~p~l~~~~G~~t~e~~v~~~~~~~e~~~~~fpI~sklI~~~~R~~-------- 188 (399)
T KOG1097|consen 117 PAFRDYAYEALEEFAEDGVVYLEVRTYPPQLYTADGDITPEDVVAIVIAALEKAKRDFPIKSKLIMCCIRHM-------- 188 (399)
T ss_pred HHHHHHHHHHHHHHHHcCceEEEEEccCchhhhcCCCCCHHHHHHHHHHHHHHHHHhCCCcceEEEeeccCC--------
Confidence 3444445556788888999887643 1101 1122345555666555555544332
Q ss_pred cCCchHHHHHHHHHHHHhccCCCCCeEEEeecccc--ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCC
Q 015784 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI--MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (400)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 260 (400)
+.+...+...............+ +.+...+. ..-++.....+...+.+.|+.+.+|++|......
T Consensus 189 ---~~e~~~e~v~~~~~~~~~~~~~V-vGidL~G~e~~~~p~~~f~~vl~~~~~~gi~~t~HaGE~~~~~~--------- 255 (399)
T KOG1097|consen 189 ---PPEVAEETVSEAKELNKLFPNFV-VGIDLVGQEDLGGPLSLFLEVLAKAPAKGIHLTFHAGETNGGAS--------- 255 (399)
T ss_pred ---ChHHHHHHHHHHHHHHHhCCCeE-EEEecCCCCCCCCChhhhHHHHHhhhhcCCcEEEEccccCCChH---------
Confidence 22333333333333222222222 22333332 2334456677777777799999999998852111
Q ss_pred CChHH-HHhHhCCCCCCeeeEEecCCChhH--HHHHHhcCCeEEECcccccccc-----CcccHHHHHHcCCcEEEcCCC
Q 015784 261 HGTVT-FLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGVKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDG 332 (400)
Q Consensus 261 ~~~~~-~l~~~~~~~~~~~~~h~~~~~~~~--i~~~~~~~~~~~~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~ 332 (400)
.++ .++ +++ ...|.|+..+.++. +.++++.++.+.+||.||..+. ...|++++++.|+++.|+||.
T Consensus 256 --~v~~~LD---~l~-~~RIGHG~~l~~dp~L~~~~k~~nI~lEiCP~SN~vl~~v~d~rnhp~~~~~~~~vP~vI~sDD 329 (399)
T KOG1097|consen 256 --VVKNALD---LLG-TERIGHGYFLTKDPELINLLKSRNIALEICPISNQVLGLVSDLRNHPVARLLAAGVPVVINSDD 329 (399)
T ss_pred --HHHHHHH---hhC-CccccCceeccCCHHHHHHHHhcCceEEEccchhhheeccccccccHHHHHHhCCCCEEEeCCC
Confidence 222 223 222 35679999986544 9999999999999999998652 235899999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 333 APSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
|...++..+-.+...+..-. .. +++.++..++ ..|..+..-++
T Consensus 330 P~~f~~~~Lt~dfy~A~~~~-----------~~-~~~~~~l~~l-a~nai~~S~l~ 372 (399)
T KOG1097|consen 330 PGFFGAAPLTLDFYLAFLGI-----------AP-NLDLRELKRL-ALNAIKYSFLS 372 (399)
T ss_pred cccccCccccHHHHHHHHhc-----------cc-cCCHHHHHHH-HHHHhhhccCC
Confidence 86533332232233322111 11 4677665554 45565554443
|
|
| >COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.49 E-value=4.6e-05 Score=65.57 Aligned_cols=274 Identities=15% Similarity=0.082 Sum_probs=153.6
Q ss_pred cccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC----cCCHHHHHHH
Q 015784 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKA 156 (400)
Q Consensus 81 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~ 156 (400)
|+..+|=|+.... .|.....++ ..+...+.+.........+.+.|.-|+.|+. +..+..+.+.
T Consensus 17 GvTl~HEHl~~~~-----------~~~~~~~~~--d~~~~~~~~a~~~~e~~~~~a~Gg~TIVD~T~~~~GRdv~~m~~v 83 (316)
T COG1735 17 GVTLMHEHLFIDP-----------YEIAGGLKN--DPYDEDDEVALAIAELKRLMARGGQTIVDATNIGIGRDVLKMRRV 83 (316)
T ss_pred cceeehhhhccch-----------HHHhhcCCC--CcccccHHHHHHHHHHHHHHHcCCCeEeeCCccccCcCHHHHHHH
Confidence 7888899986532 111111111 2233344455566667778889999999864 3567889999
Q ss_pred HHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHH-HHHhccC------CCCCeEEEeeccccccCCHHHHHHHH
Q 015784 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL-YAKHHHA------ADGRIRIWFGIRQIMNATDRLLLETR 229 (400)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~e~l~~~~ 229 (400)
+++.|++.+.+.+++.... .+ .|....+ +.+..+. .++.... ..|.++...+....-...++.++.+.
T Consensus 84 s~atglnIV~~TGfy~~~~-~p-~~~~~~~---i~~~ae~~v~ei~~Gi~gT~ikAGiIk~~~~~~~iTp~Eek~lrAaA 158 (316)
T COG1735 84 AEATGLNIVAATGFYKAAF-HP-EYFALRP---IEELAEFVVKEIEEGIAGTGIKAGIIKEAGGSPAITPLEEKSLRAAA 158 (316)
T ss_pred HHHhCCcEEEecccccccc-ch-hHHhhCC---HHHHHHHHHHHHHhcccCCccccceeeeccCcccCCHHHHHHHHHHH
Confidence 9999999988877776543 22 3322222 1222222 2222211 22444443333232233345688888
Q ss_pred HHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecC-CChhH-HHHHHhcCCeEEECccc-
Q 015784 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW-VNHTE-IGLLSRAGVKVSHCPAS- 306 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~-~~~~~-i~~~~~~~~~~~~~p~~- 306 (400)
+..++.++|+++|.....-..+ ..+++.+.|+.-.+.++.|+.. .++.. .+.++.+|+.+.+--..
T Consensus 159 ~A~~~Tg~Pi~tHt~~gt~g~e-----------q~~il~~egvdl~~v~igH~d~n~dd~~y~~~l~~~Ga~l~fD~iG~ 227 (316)
T COG1735 159 RAHKETGAPISTHTPAGTMGLE-----------QLRILAEEGVDLRKVSIGHMDPNTDDVYYQKKLADRGAFLEFDRIGK 227 (316)
T ss_pred HHhhhcCCCeEEeccchhhhHH-----------HHHHHHHcCCChhHeeEeccCCCCChHHHHHHHHhcCceEEecccCc
Confidence 8888899999999876552211 5677888887777889999984 33333 46677778886653221
Q ss_pred -cccc--cCcccHHHHHHcCC--cEEEcCCCCCCCCCCCHHHHHHHHHHHhccc--ccccCCC---CCCCCCCHHHHHHH
Q 015784 307 -AMRM--LGFAPIKEMLHADI--CVSLGTDGAPSNNRMSIVDEMYLASLINKGR--EVFANGT---TDPAALPAETVLRM 376 (400)
Q Consensus 307 -~~~~--~~~~~~~~~~~~Gv--~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~l~~~~al~~ 376 (400)
.+.. ....++.++.+.|+ ++.++-|..... .+.+. .......... ....+.+ ..+.|++-+.+=++
T Consensus 228 d~y~pd~~r~~~~~~l~~~gy~d~i~ls~d~~~~~--~~~~~--~~~~~~~~~~g~~~I~~~fIP~Lk~~Gvde~~i~~m 303 (316)
T COG1735 228 DKYYPDEDRIAPLLELVARGYADLILLSHDDICLS--DDVFL--KSMLKANGGWGYGYILNDFIPRLKRHGVDEETIDTM 303 (316)
T ss_pred cccCcHHHhhhhHHHHHHhhHhhheecccchhhhh--hhHHH--HhhhhhcCCcccchhhHhhHHHHHHcCCCHHHHHHH
Confidence 1111 23567888888885 466662322110 00110 0000000000 0000000 12467996667777
Q ss_pred HhHHHHHHcCC
Q 015784 377 ATINGAKSVLW 387 (400)
Q Consensus 377 ~T~~~A~~lg~ 387 (400)
.--||+++|..
T Consensus 304 lvdNP~r~f~~ 314 (316)
T COG1735 304 LVDNPARLFTA 314 (316)
T ss_pred HhhCHHHHhcc
Confidence 78899999864
|
|
| >TIGR01431 adm_rel adenosine deaminase-related growth factor | Back alignment and domain information |
|---|
Probab=98.49 E-value=0.00011 Score=69.64 Aligned_cols=146 Identities=13% Similarity=0.124 Sum_probs=93.3
Q ss_pred CHHHHHHHHH-HHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcC
Q 015784 221 TDRLLLETRD-MAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAG 297 (400)
Q Consensus 221 ~~e~l~~~~~-~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~ 297 (400)
+...+...+. .+++.|+++.+|++|......... .+..+.+ .++ ...|.|+..+. ++.++.+++++
T Consensus 304 pl~~f~~~~~~~~~~~gl~~t~HAGE~~~~g~~~d------~nl~dAI----lLg-~~RIGHG~~l~~~P~l~~~vke~~ 372 (479)
T TIGR01431 304 SLLDFIDALLGPSDKEKLPYFFHAGETNWQGTTVD------ENLIDAL----LLN-TTRIGHGFALVKHPLVLQMLKERN 372 (479)
T ss_pred CHHHHHHHHHHHHHhCCCCEEEecCCcCCCCCCch------hHHHHHH----HcC-CccccCcccccCCHHHHHHHHHhC
Confidence 4555555554 555699999999998763110000 0122222 222 24578999874 78899999999
Q ss_pred CeEEECcccccccc-----CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 015784 298 VKVSHCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (400)
Q Consensus 298 ~~~~~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 372 (400)
+.+.+||.||..+. ...|++.|+++|++|+++||.|.....-++-++...+..... ...++. +
T Consensus 373 I~lEvCP~SN~~l~~v~~~~~HPl~~lla~Gvpv~InSDDP~~~~~t~Ls~ef~~a~~~~~-----------~~~~~l-~ 440 (479)
T TIGR01431 373 IAVEVNPISNQVLQLVADLRNHPCAYLFADNYPMVISSDDPAFWGATPLSHDFYIAFMGLA-----------SAKADL-R 440 (479)
T ss_pred CeEEECccchhhhcccCCcccChHHHHHHCCCcEEEeCCCccccCCCCchHHHHHHHHHhc-----------ccCCCH-H
Confidence 99999999998652 235999999999999999999865332245556555442211 011344 4
Q ss_pred HHHHHhHHHHHHcCCCC
Q 015784 373 VLRMATINGAKSVLWDN 389 (400)
Q Consensus 373 al~~~T~~~A~~lg~~~ 389 (400)
-|+....|+.+..-+++
T Consensus 441 ~L~~la~NSi~~Sfl~~ 457 (479)
T TIGR01431 441 TLKQLALNSIKYSALSE 457 (479)
T ss_pred HHHHHHHHHHHHHCCCH
Confidence 55566666766655543
|
Members of this family have been described as secreted proteins with growth factor activity and regions of adenosine deaminase homology in insects, mollusks, and vertebrates. |
| >PRK10425 DNase TatD; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=0.00015 Score=63.22 Aligned_cols=139 Identities=12% Similarity=-0.033 Sum_probs=85.3
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.++..+++|+++++|+.+|+-+...+ .++++..... ..+..+.|+..=+.+.++++.+.|..+++
T Consensus 108 ~vF~~ql~lA~~~~~Pv~iH~r~a~~~-------------~l~iL~~~~~-~~~~~i~H~fsG~~~~~~~~l~~G~~~si 173 (258)
T PRK10425 108 RAFVAQLAIAAELNMPVFMHCRDAHER-------------FMALLEPWLD-KLPGAVLHCFTGTREEMQACLARGLYIGI 173 (258)
T ss_pred HHHHHHHHHHHHhCCCeEEEEeCchHH-------------HHHHHHHhcc-CCCCeEEEecCCCHHHHHHHHHCCCEEEE
Confidence 457888899999999999999754432 4455554211 11235679998889999999999999888
Q ss_pred CccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC-C---------CCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 015784 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN-R---------MSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (400)
.+..... .....++.+.+. . =++.+-||+|-..+ + -.+..-...+..+... .++++
T Consensus 174 ~g~i~~~-~~~~~~~~~~~~ipldrlLlETDaP~l~P~~~~~~~~~~~n~P~~i~~v~~~iA~l-----------~~~~~ 241 (258)
T PRK10425 174 TGWVCDE-RRGLELRELLPLIPAERLLLETDAPYLLPRDLTPKPASRRNEPAFLPHILQRIAHW-----------RGEDA 241 (258)
T ss_pred Cceeecc-cccHHHHHHHHhCChHHEEEeccCCCCCCCCcCCCCCCCCCCcHHHHHHHHHHHHH-----------HCcCH
Confidence 7643211 111123333321 1 15778999873211 0 1122222222222221 24899
Q ss_pred HHHHHHHhHHHHHHcCC
Q 015784 371 ETVLRMATINGAKSVLW 387 (400)
Q Consensus 371 ~~al~~~T~~~A~~lg~ 387 (400)
+++.+..+.|.-+++|+
T Consensus 242 ~~v~~~~~~N~~~lf~~ 258 (258)
T PRK10425 242 AWLAATTDANARTLFGL 258 (258)
T ss_pred HHHHHHHHHHHHHHhCc
Confidence 99999999999888874
|
|
| >PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition | Back alignment and domain information |
|---|
Probab=98.29 E-value=3.3e-05 Score=67.62 Aligned_cols=214 Identities=13% Similarity=0.100 Sum_probs=118.6
Q ss_pred HHHHhcCcceeeccCcC--CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCe-
Q 015784 132 IELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI- 208 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (400)
..+.+.|++.+...+.. ......+.+...+.+.....+++.. +.........+...++ ..... ..+
T Consensus 21 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~v~~~~GiHP~-------~~~~~~~~~~~~l~~l-~~~~~---~~~~ 89 (255)
T PF01026_consen 21 ERAREAGVSAIIIVSTDPEDWERVLELASQYPDRVYPALGIHPW-------EAHEVNEEDLEELEEL-INLNR---PKVV 89 (255)
T ss_dssp HHHHHTTEEEEEEEESSHHHHHHHHHHHHHTTTEEEEEE---GG-------GGGGHSHHHHHHHHHH-HHHTS---TTEE
T ss_pred HHHHHcCCCEEEEcCCCHHHhHHHHHHHhcCCCeEEEEecCCcc-------hhhhhhHHHHHHHHHH-HHhcc---ccce
Confidence 55778899999765522 2344556666667666555444432 1111122223333333 11222 222
Q ss_pred EE-Eeeccccc------cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEE
Q 015784 209 RI-WFGIRQIM------NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH 281 (400)
Q Consensus 209 ~~-~~~~~~~~------~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h 281 (400)
.+ -++..... ..-.+.+.+.+++|+++++|+.+|+-....+ .++.+...+..+. .++.|
T Consensus 90 aIGEiGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~a~~~-------------~l~il~~~~~~~~-~~i~H 155 (255)
T PF01026_consen 90 AIGEIGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRKAHEE-------------LLEILKEYGPPNL-RVIFH 155 (255)
T ss_dssp EEEEEEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEESHHHH-------------HHHHHHHTTGGTS-EEEET
T ss_pred eeeeeccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCCcHHH-------------HHHHHHhccccce-eEEEe
Confidence 11 13333211 1223467888899999999999999764332 5566677663222 66789
Q ss_pred ecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHc-C-CcEEEcCCCCCC---------CCCCCHHHHHHHHHH
Q 015784 282 TVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPS---------NNRMSIVDEMYLASL 350 (400)
Q Consensus 282 ~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~---------~~~~~~~~~~~~~~~ 350 (400)
+..-+.+.++.+.+.|..+++.+....+. ....+.+++. + =++.+-||.|-. +....+..-+.....
T Consensus 156 ~f~g~~~~~~~~~~~g~~~S~~~~~~~~~--~~~~~~~~~~ip~drillETD~P~~~~~~~~~~~~~p~~i~~~~~~la~ 233 (255)
T PF01026_consen 156 CFSGSPEEAKKFLDLGCYFSFSGAITFKN--SKKVRELIKAIPLDRILLETDAPYLAPDPYRGKPNEPSNIPKVAQALAE 233 (255)
T ss_dssp T--S-HHHHHHHHHTTEEEEEEGGGGSTT--SHHHHHHHHHS-GGGEEEE-BTTSSECTTSTTSE--GGGHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHhcCceEEecccccccc--cHHHHHHHhcCChhhEEEcCCCCcCCccccCCCCCChHHHHHHHHHHHH
Confidence 98888889999999999988877644321 1123333332 2 268899998621 111222222222222
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
+ .+++++++.+....|..+++|
T Consensus 234 ~--------------~~~~~e~~~~~~~~N~~r~f~ 255 (255)
T PF01026_consen 234 I--------------KGISLEELAQIIYENAKRLFG 255 (255)
T ss_dssp H--------------HTSTHHHHHHHHHHHHHHHHT
T ss_pred H--------------cCCCHHHHHHHHHHHHHHHhC
Confidence 1 148999999999999999876
|
; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A .... |
| >PLN03055 AMP deaminase; Provisional | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.0016 Score=62.39 Aligned_cols=98 Identities=18% Similarity=0.131 Sum_probs=72.7
Q ss_pred eeeEEecCC--ChhHHHHHHhcCCeEEECccccccc-c--CcccHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHH
Q 015784 277 LLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRM-L--GFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLAS 349 (400)
Q Consensus 277 ~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~-~--~~~~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~ 349 (400)
..|.|+..+ ++..+.+++..++.+.+||.||..+ . ...|++.|++.|++|+++||.+...+. -.+.+|...+.
T Consensus 440 ~RIgHGi~l~~dP~L~yl~~~~qI~LevCPlSN~~l~~~y~~HP~~~~~~~Gl~VSInTDDPl~f~tT~epL~eEY~~aa 519 (602)
T PLN03055 440 HNIAHGNNLRKSPGLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFARGLNVSLSTDDPLQIHLTKEPLVEEYSIAA 519 (602)
T ss_pred ceecCccccCCCHHHHHHHHHcCCeEEEccCcchhhccchhhChHHHHHHCCCEEEEcCCCcchhcCCCCcHHHHHHHHH
Confidence 346888876 4667788889999999999999764 2 245999999999999999999865221 24677777766
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
... +++..+...+ ..|+.++.++++
T Consensus 520 ~~~--------------~LS~~DL~eL-arNSV~~Sf~~~ 544 (602)
T PLN03055 520 QVW--------------KLSSCDLCEI-ARNSVLQSGFPH 544 (602)
T ss_pred HHh--------------CCCHHHHHHH-HHHHHHHhcCCH
Confidence 443 4888887544 677777776653
|
|
| >PRK06361 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.019 Score=48.68 Aligned_cols=200 Identities=14% Similarity=0.094 Sum_probs=107.6
Q ss_pred CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHH
Q 015784 148 QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLE 227 (400)
Q Consensus 148 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~ 227 (400)
..++.+.+.+.+.|+..+.-....... ..........+..+++.... .+.+..+..... ..++.+..
T Consensus 10 ~~~~e~v~~A~~~Gl~~i~iTDH~~~~----------~~~~~~~~~~~~~~~~~~~~--~i~v~~GiE~~~-~~~~~~~~ 76 (212)
T PRK06361 10 LIPSELVRRARVLGYRAIAITDHADAS----------NLEEILEKLVRAAEELELYW--DIEVIPGVELTH-VPPKLIPK 76 (212)
T ss_pred CCHHHHHHHHHHcCCCEEEEecCCCCc----------cHHHHHHHHHHHHHHHhhcC--CCEEEEEEEEcc-cCchhhch
Confidence 446677777777777764432221110 01111122222223332221 355555553322 33445666
Q ss_pred HHHHHHHcCCe-eeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccc
Q 015784 228 TRDMAREFKTG-IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPAS 306 (400)
Q Consensus 228 ~~~~a~~~~~~-v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~ 306 (400)
..+...+.+.. +.+|-. ...... .. . ..... ...+. -.++.|...+..+.++.+++.++.+.++...
T Consensus 77 ~~~~~~~~~~~~~svH~~-~~~~~~-~~-----~-~~~~a-~~~~~---~dvlaHpd~~~~~~~~~~~~~~~~lEin~~~ 144 (212)
T PRK06361 77 LAKKARDLGAEIVVVHGE-TIVEPV-EE-----G-TNLAA-IECED---VDILAHPGLITEEEAELAAENGVFLEITARK 144 (212)
T ss_pred HHHHHHHCCCEEEEECCC-Ccchhh-hh-----h-hHHHH-HhCCC---CcEecCcchhhHHHHHHHHHcCeEEEEECCC
Confidence 66666676666 567722 111000 00 0 01111 12222 2567788777788899999999998876422
Q ss_pred cccccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 307 AMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 307 ~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
.........++.+.+.|+++++|||.... .++. .+..+..+. ...+++.++++.+.+.||+.+|+
T Consensus 145 ~~~~~~~~~l~~a~~~gi~vv~~SDaH~~---~d~~-~~~~~~~i~-----------~~~gl~~~~v~~~~~~~~~~~~~ 209 (212)
T PRK06361 145 GHSLTNGHVARIAREAGAPLVINTDTHAP---SDLI-TYEFARKVA-----------LGAGLTEKELEEALENNPKLLLK 209 (212)
T ss_pred CcccchHHHHHHHHHhCCcEEEECCCCCH---HHHH-HHHHHHHHH-----------cCCCCCHHHHHHHHHHhHHHHHH
Confidence 21112223456667789999999997532 1232 344333333 35679999999999999999986
Q ss_pred C
Q 015784 387 W 387 (400)
Q Consensus 387 ~ 387 (400)
.
T Consensus 210 ~ 210 (212)
T PRK06361 210 R 210 (212)
T ss_pred h
Confidence 4
|
|
| >TIGR01429 AMP_deaminase AMP deaminase | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0019 Score=62.22 Aligned_cols=133 Identities=18% Similarity=0.215 Sum_probs=86.7
Q ss_pred HHHHHHHHHHcCCe---eeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcCCe
Q 015784 225 LLETRDMAREFKTG---IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVK 299 (400)
Q Consensus 225 l~~~~~~a~~~~~~---v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~~~ 299 (400)
|..+=.+-++.|+. +..|++|...... ..+.+ +. -..|.|+..+. +.....+...++.
T Consensus 424 l~~LN~~R~~rGLnt~~LrpHaGEag~~e~-----------l~~A~-----L~-adRIgHGi~l~~dp~L~yl~~~~qI~ 486 (611)
T TIGR01429 424 IMVLNNFRRERGLNTFLLRPHCGEAGSVDH-----------LVSAF-----LT-SHGINHGILLRKVPVLQYLYYLTQIP 486 (611)
T ss_pred HHHHHHHHHHcCCCccceeecCCCCCCHHH-----------HHHHh-----hc-CcccccceecCCCHHHHHHHHHcCCe
Confidence 33333444555665 8899987553211 11111 22 23468998873 4455566789999
Q ss_pred EEECccccccc-cC--cccHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 300 VSHCPASAMRM-LG--FAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 300 ~~~~p~~~~~~-~~--~~~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
+.+||.||... .+ ..|+++|+++|++|+++||.+..... -.+.+|...+.... +++..+..
T Consensus 487 LevCPtSN~~l~~~y~~HP~~~~~~~Gl~VSLsTDDPl~f~~T~epL~EEY~~aa~~~--------------~Ls~~Dl~ 552 (611)
T TIGR01429 487 IAMSPLSNNSLFLEYSKNPLPEYLHKGLNVSLSTDDPLQFHYTKEALMEEYAIAAQVW--------------KLSTCDMC 552 (611)
T ss_pred EEEcCCcchhhccChhhChHHHHHHCCCeEEEcCCCchhhCCCCCcHHHHHHHHHHHh--------------CCCHHHHH
Confidence 99999999754 32 45999999999999999999854221 24677777766443 48887766
Q ss_pred HHHhHHHHHHcCCCC
Q 015784 375 RMATINGAKSVLWDN 389 (400)
Q Consensus 375 ~~~T~~~A~~lg~~~ 389 (400)
.+ ..|+.+..++++
T Consensus 553 eL-arNSV~~S~~~~ 566 (611)
T TIGR01429 553 EL-ARNSVLQSGFEH 566 (611)
T ss_pred HH-HHHHHHHhCCCH
Confidence 65 456666666653
|
This model describes AMP deaminase, a large, well-conserved eukaryotic protein involved in energy metabolism. Most members of the family have an additional, poorly alignable region of 150 amino acids or more N-terminal to the region included in the model. |
| >cd01319 AMPD AMP deaminase (AMPD) catalyzes the hydrolytic deamination of adensosine monophosphate (AMP) at position 6 of the adenine nucleotide ring | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0034 Score=59.32 Aligned_cols=98 Identities=16% Similarity=0.156 Sum_probs=69.4
Q ss_pred eeeEEecCCC--hhHHHHHHhcCCeEEECccccccc-cC--cccHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHH
Q 015784 277 LLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-LG--FAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLAS 349 (400)
Q Consensus 277 ~~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~-~~--~~~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~ 349 (400)
..|.|+..+. +.....++..++.+.+||.||..+ .+ ..|++.+++.|++|+++||.+...+. -++..|...+.
T Consensus 350 dRIGHGv~l~~dp~L~~l~~~~qI~levCPlSN~~l~~~~~~HP~~~~l~~Gl~VsInTDDPl~f~~t~~~L~eEY~~a~ 429 (496)
T cd01319 350 HGISHGINLRKVPVLQYLYYLTQIGIAMSPLSNNSLFLSYEKNPFPEFFKRGLNVSLSTDDPLQFHFTKEPLMEEYSIAA 429 (496)
T ss_pred cccccccccCCCHHHHHHHHHcCCeEEEecCccHhhhcCcccChHHHHHHCCCeEEEeCCCchhhCCCCCcHHHHHHHHH
Confidence 4478998874 334455567899999999999765 33 46999999999999999999854221 24667776665
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
... +++.++..+ ...|+.+..++++
T Consensus 430 ~~~--------------~Ls~~Dl~e-LarNSV~~Sf~~~ 454 (496)
T cd01319 430 QVW--------------KLSTCDMCE-LARNSVLQSGFEH 454 (496)
T ss_pred HHc--------------CCCHHHHHH-HHHHHHHHhCCCH
Confidence 433 488877644 4566776666653
|
AMPD is a diverse and highly regulated eukaryotic key enzyme of the adenylate catabolic pathway. |
| >cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM) | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.052 Score=47.76 Aligned_cols=100 Identities=15% Similarity=0.126 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC----------hhHH
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----------HTEI 290 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~----------~~~i 290 (400)
+.+.+..+++.+.++|+++.+|+..... .. ..+.+... +.+.++.|+.... .+.+
T Consensus 108 ~~~~~~~~~~~~~~~gl~v~~~~~~~~l--~~----------l~~l~~~~---~l~ivldH~G~p~~~~~~~~~~~~~~l 172 (263)
T cd01311 108 NKDELDEIAKRAAELGWHVQVYFDAVDL--PA----------LLPFLQKL---PVAVVIDHFGRPDVTKGVDGAEFAALL 172 (263)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeCHhhH--HH----------HHHHHHHC---CCCEEEECCCCCCCCCCCCCHhHHHHH
Confidence 6677889999999999999999864322 10 22344444 4578899988643 1223
Q ss_pred HHHHhcCCeEEECcccccc-----ccCcc-cHHHHHHcC-CcEEEcCCCCCC
Q 015784 291 GLLSRAGVKVSHCPASAMR-----MLGFA-PIKEMLHAD-ICVSLGTDGAPS 335 (400)
Q Consensus 291 ~~~~~~~~~~~~~p~~~~~-----~~~~~-~~~~~~~~G-v~v~~gtD~~~~ 335 (400)
+.++..++.+.++-...+. ..... -++.+.+.| =++.+|||+|..
T Consensus 173 ~~l~~pNV~~k~Sg~~~~~~~~~~~~~~~~~~~~~~~~g~dRlmfGSD~P~~ 224 (263)
T cd01311 173 KLIEEGNVWVKVSGPYRLSVKQEAYADVIAFARQIVAAAPDRLVWGTDWPHP 224 (263)
T ss_pred HHHhcCCEEEEecchhhcCCCCCCHHHHHHHHHHHHHhCCCcEEEeCCCCCC
Confidence 4332235554443221110 01111 234444556 478999999854
|
This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature. |
| >PLN02768 AMP deaminase | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0031 Score=62.00 Aligned_cols=97 Identities=19% Similarity=0.158 Sum_probs=70.7
Q ss_pred eeEEecCCC--hhHHHHHHhcCCeEEECccccccc-c--CcccHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHHH
Q 015784 278 LSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-L--GFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASL 350 (400)
Q Consensus 278 ~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~-~--~~~~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~~ 350 (400)
.|.|+..+. +..+.++...++.+.+||.||..+ . ...|+++|+++|++|+++||.+...+. -.+.+|...+..
T Consensus 674 RIgHGv~l~kdP~LqyL~~l~qIgLevCPlSN~~l~~~y~~HPf~~f~~~GL~VSLNTDDPL~fhtT~epL~EEYsvAak 753 (835)
T PLN02768 674 NIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFLDYHRNPFPMFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAAS 753 (835)
T ss_pred ccCCccccCcCHHHHHHHHHcCCeEEECCCcchhhhcchhhChHHHHHHCCCEEEEcCCCccccCCCCCCHHHHHHHHHH
Confidence 357888863 455567777899999999999865 2 345999999999999999999865322 247788777664
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
.. +++..|..++ +.|+.++.++++
T Consensus 754 ~~--------------~LS~~DL~EL-arNSV~aSff~~ 777 (835)
T PLN02768 754 VW--------------KLSSCDLCEI-ARNSVYQSGFSH 777 (835)
T ss_pred Hh--------------CcCHHHHHHH-HHHHHHHhcCCH
Confidence 43 4888777665 566666666653
|
|
| >PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3 | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.001 Score=48.21 Aligned_cols=49 Identities=24% Similarity=0.449 Sum_probs=34.2
Q ss_pred CCCCCCCCCCC-CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChh
Q 015784 6 SGGGSSSGSLG-SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSAD 58 (400)
Q Consensus 6 ~~~~~~~~~~~-~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~ 58 (400)
.|+++++.... ...+++|+|+.|++.. . +-+++|.|+||+|+.||+...
T Consensus 52 dGMgq~~~~~~~~~lD~VItNa~IiD~~---G-I~KADIGIkdG~I~gIGkAGN 101 (121)
T PF00449_consen 52 DGMGQSSGATRDEALDLVITNALIIDYT---G-IVKADIGIKDGRIVGIGKAGN 101 (121)
T ss_dssp BTTTB-SSSGTTCC-SEEEEEEEEEETT---E-EEEEEEEEETTEEEEEE-EB-
T ss_pred CCCCcCCCCCccccccEEEeCcEEEecC---C-cEEeeEEeeCCEEEEEeccCC
Confidence 34455554433 3679999999999752 3 468899999999999998654
|
5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O .... |
| >PTZ00310 AMP deaminase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.008 Score=62.88 Aligned_cols=98 Identities=18% Similarity=0.181 Sum_probs=73.2
Q ss_pred eeeEEecCC--ChhHHHHHHhcCCeEEECccccccc-c--CcccHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHH
Q 015784 277 LLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRM-L--GFAPIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLAS 349 (400)
Q Consensus 277 ~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~-~--~~~~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~ 349 (400)
..|.|+..+ ++..+.++...++.+.+||.||..+ . ...|+++|++.|++|+++||.+...+. ..+.+|...+.
T Consensus 1133 ~RIgHGi~l~~dp~L~yl~~l~qI~LevCPlSN~~l~~sy~~hP~~~f~~~Gl~VSLnTDDPl~f~tT~EpL~eEYsiaa 1212 (1453)
T PTZ00310 1133 NSICHGINLRNDPPMQYLYYLAQIGLHVSPLSNNALFLAFLENPFPVFFHRGLNVSLSTDDPLMFHQTQEPLIEEYSIAA 1212 (1453)
T ss_pred ccccchhhhCcCHHHHHHHHHcCCeEEECCCchHhhhhchhhCcHHHHHHCCCEEEECCCCccccCCCcccHHHHHHHHH
Confidence 347899987 3556667888999999999999754 2 346999999999999999999865321 23677777766
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
... +++.+|..++ ..|+..+.|.+.
T Consensus 1213 ~~~--------------~LS~~Dl~el-arNSV~~SGf~~ 1237 (1453)
T PTZ00310 1213 RVW--------------GLSLNDLCEI-ARNSVLQSGFDA 1237 (1453)
T ss_pred HHh--------------CCCHHHHHHH-HHHHHHHcCCCH
Confidence 443 4888887665 567777888763
|
|
| >PTZ00310 AMP deaminase; Provisional | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.02 Score=60.03 Aligned_cols=97 Identities=13% Similarity=0.121 Sum_probs=69.8
Q ss_pred eeEEecCCC-hhHHHHHH-hcCCeEEECcccccccc----CcccHHHHHHcCCcEEEcCCCCCCCCCC--CHHHHHHHHH
Q 015784 278 LSAHTVWVN-HTEIGLLS-RAGVKVSHCPASAMRML----GFAPIKEMLHADICVSLGTDGAPSNNRM--SIVDEMYLAS 349 (400)
Q Consensus 278 ~~~h~~~~~-~~~i~~~~-~~~~~~~~~p~~~~~~~----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~--~~~~~~~~~~ 349 (400)
.|.|+..+. ...+..+. ..++.+.+||.||..+. ...|+++|+++|++|+++||.+...+.- .+.+|...+.
T Consensus 504 RI~HGi~l~d~p~LqyL~~e~qI~LeVCPlSN~~l~v~sy~~HPi~~fl~~GL~VSLNTDDPl~F~tt~EpL~EEY~iaa 583 (1453)
T PTZ00310 504 VITRATSIADYPVLQYLCGLHRVGLTVSPLRDHALSITAYFDHPLPKFLHRCLRVSISTSDPLYFHHHSQPLIEEYATAM 583 (1453)
T ss_pred cccchhccCchHHHHHHHHHcCCeEEECCCcccccCCCchhhCcHHHHHHCCCEEEECCCCccccCCCCccHHHHHHHHH
Confidence 467888764 34455554 88999999999997652 2359999999999999999998653322 4777777766
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
... +++..|..++ +.|+..+.++++
T Consensus 584 q~~--------------gLS~~DL~eL-arNSV~aSf~~~ 608 (1453)
T PTZ00310 584 KLF--------------SLSPLDTTEL-ARNSVLNSSFPP 608 (1453)
T ss_pred HHh--------------CcCHHHHHHH-HHHHHHHhCCCH
Confidence 443 4888777665 566776666653
|
|
| >COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.70 E-value=1.1 Score=39.91 Aligned_cols=147 Identities=13% Similarity=0.054 Sum_probs=81.4
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHHhHhCCCCCCeeeEEec--CC-ChhHHHHHH
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDKIEFLQNNLLSAHTV--WV-NHTEIGLLS 294 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~h~~--~~-~~~~i~~~~ 294 (400)
..++..+..+++.|.++|+++.+|...+......-.. ....-.+ +++.++. +-+.++.|+. .. ..+.+....
T Consensus 140 ~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~~~~~~--~~~p~~~~~va~~fP--~l~IVl~H~G~~~p~~~~a~~~a~ 215 (293)
T COG2159 140 YPDDPRLYPIYEAAEELGVPVVIHTGAGPGGAGLEKG--HSDPLYLDDVARKFP--ELKIVLGHMGEDYPWELEAIELAY 215 (293)
T ss_pred CCCChHHHHHHHHHHHcCCCEEEEeCCCCCCcccccC--CCCchHHHHHHHHCC--CCcEEEEecCCCCchhHHHHHHHH
Confidence 3344458999999999999999999875542211000 0000112 3444443 3368999997 32 233333332
Q ss_pred h-cCCeEEECccccccccCcccHHHHHHcC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 015784 295 R-AGVKVSHCPASAMRMLGFAPIKEMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (400)
Q Consensus 295 ~-~~~~~~~~p~~~~~~~~~~~~~~~~~~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 372 (400)
+ .++.+...-..-..+.. .-++.+.+.+ -++.+|||+|... +...+.... ...++.+.
T Consensus 216 ~~~nvy~d~s~~~~~~~~~-~~~~~~~~~~~dkilFGSD~P~~~----~~~~l~~~~---------------~l~l~~e~ 275 (293)
T COG2159 216 AHPNVYLDTSGVRPKYFAP-PLLEFLKELGPDKILFGSDYPAIH----PEVWLAELD---------------ELGLSEEV 275 (293)
T ss_pred hCCCceeeeeccccccCCh-HHHHHHHhcccCeEEecCCCCCcC----HHHHHHHHH---------------hcCCCHHH
Confidence 2 24443322110000000 2245555533 5899999977442 323333322 22488888
Q ss_pred HHHHHhHHHHHHcCCCC
Q 015784 373 VLRMATINGAKSVLWDN 389 (400)
Q Consensus 373 al~~~T~~~A~~lg~~~ 389 (400)
.-+..=.|+++++|++.
T Consensus 276 k~kiL~~NA~rll~l~~ 292 (293)
T COG2159 276 KEKILGENAARLLGLDP 292 (293)
T ss_pred HHHHHHHhHHHHhCcCC
Confidence 89999999999999864
|
|
| >PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily [] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.098 Score=46.09 Aligned_cols=161 Identities=12% Similarity=0.010 Sum_probs=78.1
Q ss_pred eEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC--
Q 015784 208 IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV-- 285 (400)
Q Consensus 208 ~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~-- 285 (400)
+++..........++.....+.+.|.++|++|.+|+................ ...+.+.++ .+-+.++.|+...
T Consensus 102 v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~~~~~~~~~~--~~~~~~~~~--P~l~ii~~H~G~~~~ 177 (273)
T PF04909_consen 102 VKLHPDLGGFDPDDPRLDDPIFEAAEELGLPVLIHTGMTGFPDAPSDPADPE--ELEELLERF--PDLRIILAHLGGPFP 177 (273)
T ss_dssp EEEESSETTCCTTSGHCHHHHHHHHHHHT-EEEEEESHTHHHHHHHHHHHHH--HHTTHHHHS--TTSEEEESGGGTTHH
T ss_pred eEecCCCCccccccHHHHHHHHHHHHhhccceeeeccccchhhhhHHHHHHH--HHHHHHHHh--cCCeEEEecCcccch
Confidence 4443333333344443345899999999999999975110000000000000 011223332 2347889999986
Q ss_pred ChhH-HHHHHhc-CCeEEECccc----cccc-cCcccHHHHHH-cC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccc
Q 015784 286 NHTE-IGLLSRA-GVKVSHCPAS----AMRM-LGFAPIKEMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE 356 (400)
Q Consensus 286 ~~~~-i~~~~~~-~~~~~~~p~~----~~~~-~~~~~~~~~~~-~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (400)
...+ ++.+.+. ++.+...-.. .... .....+.++++ .| =++.+|||.|... ...............
T Consensus 178 ~~~~~~~l~~~~~nvy~d~s~~~~~~~~~~~~~~~~~l~~~~~~~g~drilfGSD~P~~~----~~~~~~~~~~~~~~~- 252 (273)
T PF04909_consen 178 WWEEALRLLDRFPNVYVDLSGIPPFWYFWPPSFDRPFLRRAVDEFGPDRILFGSDYPHPD----GASPYEYIWEAYFLD- 252 (273)
T ss_dssp HHHHHHHHHHHHTTEEEECHSHHSSEEEETTHHCHHHHHHHHHHHTGGGEEEE--TTSST----HHHHHHHHHHHHHHH-
T ss_pred hHHHHHHHHHhCCcccccccccccccccCcccccHHHHHHHHHHhCCceEEecCCCCCCC----ccccHHHHHHhhhcc-
Confidence 3333 4444443 4544332110 0000 11234455544 34 3899999998552 222222211111000
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 357 VFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 357 ~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
.++.++.=+.+-.|+++++|+
T Consensus 253 ----------~l~~~~~~~i~~~NA~rl~~l 273 (273)
T PF04909_consen 253 ----------DLSEEEREKILYDNARRLYGL 273 (273)
T ss_dssp ----------HSSHHHHHHHHTHHHHHHHTC
T ss_pred ----------CCCHHHHHHHHhHhHHHHcCc
Confidence 158999999999999999985
|
The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. |
| >KOG3020 consensus TatD-related DNase [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=95.05 E-value=2.3 Score=37.57 Aligned_cols=156 Identities=11% Similarity=0.114 Sum_probs=86.4
Q ss_pred HHHhcCcceeeccCcC--CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccC-CchHHHHHHHHHHHHhccCCCCCeE
Q 015784 133 ELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR-TTDDCIQSQKELYAKHHHAADGRIR 209 (400)
Q Consensus 133 ~~l~~GvTt~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (400)
.+...|+.-+...++. ..+...+.+.......+...+++. .+..+|... .++..+.....++.. ... ...+.
T Consensus 40 ~a~~~~v~~~~v~gt~~~d~~~~~~l~~~y~~~v~~t~G~HP---~~~~~~~~~~~~~~~~~~L~~~~~~-~~~-~k~vA 114 (296)
T KOG3020|consen 40 RAVQAGVSKLIVTGTSLKDSKEALELAEKYPGSVYPTFGVHP---HFSQEFSDQSRKEKFLDTLLSIIEN-GFL-PKVVA 114 (296)
T ss_pred HHHhccceEEEEeCCCcchHHHHHHHHhhCCCceeeccCcCC---CcccchhhccchhhHHHHHHHHHhh-ccc-CCeEE
Confidence 3667799999987752 234455556555322222222211 122223222 223345555555544 111 11111
Q ss_pred EE-eeccccc--cCC----HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEe
Q 015784 210 IW-FGIRQIM--NAT----DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHT 282 (400)
Q Consensus 210 ~~-~~~~~~~--~~~----~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~ 282 (400)
+. ++..... ..+ ...+++-+++|.+..+|+.+|+-....+ .++++.+......+-++.|+
T Consensus 115 iGEcGLD~~r~~~~~~~~Qk~vFekQl~LA~~~~~Pl~iH~r~a~~d-------------~~eIl~~~~~~~~~~vvvHs 181 (296)
T KOG3020|consen 115 IGECGLDYDRLQFSDKEEQKTVFEKQLDLAKRLKLPLFIHCRSAHED-------------LLEILKRFLPECHKKVVVHS 181 (296)
T ss_pred eeccccccchhccCChHHHHHHHHHHHHHHHHccCCeeeechhhhHH-------------HHHHHHHhccccCCceEEEe
Confidence 10 1222111 111 1246777899999999999999764332 55666666544333578999
Q ss_pred cCCChhHHHHHHhcCCeEEECccc
Q 015784 283 VWVNHTEIGLLSRAGVKVSHCPAS 306 (400)
Q Consensus 283 ~~~~~~~i~~~~~~~~~~~~~p~~ 306 (400)
..-+.++++++.+.++.+.+.+.+
T Consensus 182 FtGs~e~~~~~lk~~~yig~~g~~ 205 (296)
T KOG3020|consen 182 FTGSAEEAQKLLKLGLYIGFTGCS 205 (296)
T ss_pred ccCCHHHHHHHHHccEEeccccee
Confidence 999999999999999666655543
|
|
| >COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only] | Back alignment and domain information |
|---|
Probab=94.68 E-value=2.7 Score=36.65 Aligned_cols=136 Identities=11% Similarity=0.029 Sum_probs=73.7
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHH-hHhCCCCCCeeeEEecCCCh---------hHHHH
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFL-DKIEFLQNNLLSAHTVWVNH---------TEIGL 292 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~~h~~~~~~---------~~i~~ 292 (400)
..+++.++...+.|+.+.++...... ...+ ......+.++++.|+..... +.+.+
T Consensus 124 ~~~r~~~~rL~~~gl~fdl~~~~~ql---------------~~~i~l~~~~Pd~~~VldH~G~p~~~~~~~~~w~~~m~~ 188 (279)
T COG3618 124 PAWRANVERLAKLGLHFDLQVDPHQL---------------PDLIPLALKAPDVNFVLDHCGRPDIKINLEDPWKAALAR 188 (279)
T ss_pred HHHHHHHHHHHhcCCeEEEEeChhhh---------------HHHHHHHhhCCCCCEEeccCCCCCccccccCHHHHHHHH
Confidence 47888889999999998888754332 1111 12223345789999988631 23444
Q ss_pred HHhc-CCeEEECccccccc-----cCcccH-HHHHH-cC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC
Q 015784 293 LSRA-GVKVSHCPASAMRM-----LGFAPI-KEMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 363 (400)
Q Consensus 293 ~~~~-~~~~~~~p~~~~~~-----~~~~~~-~~~~~-~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (400)
+++. |+.+-..=...+.- ....|+ ..+++ .| -++.+|||+|...-..++ ..+..+...-
T Consensus 189 la~~pNv~~KlSG~~~~~~~~w~~~~v~p~~e~~i~~fg~dR~vfGSdwPv~~l~~~~-~~~~~~~~~~----------- 256 (279)
T COG3618 189 LARRPNVWAKLSGVYAYSDESWTVEDVRPYVEELIELFGWDRFVFGSDWPVTSLESDF-ASWVAATREL----------- 256 (279)
T ss_pred HHhCCCeEEEEeeecccccCCCCHHHHHHHHHHHHHhcCccceEecCCCCcccccCCh-HHHHHHHHHH-----------
Confidence 4443 44433221111111 112233 23333 36 689999999854222222 2222222111
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 364 DPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 364 ~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
-.+ +..|--+..-.||+++.++
T Consensus 257 -v~~-~~~er~~i~~~NA~rly~~ 278 (279)
T COG3618 257 -VPG-DAAERARILVDNARRLYRL 278 (279)
T ss_pred -cCC-CHHHHHHHHhhCHHHHhCC
Confidence 012 5788888889999988754
|
|
| >PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria | Back alignment and domain information |
|---|
Probab=93.64 E-value=0.02 Score=43.10 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=25.5
Q ss_pred eeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCch
Q 015784 212 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (400)
Q Consensus 212 ~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~ 248 (400)
+...+........+.+.++. .+.+..+..||.++.-
T Consensus 55 fsddg~giq~~~lm~eamk~-a~l~~~i~ahceDd~l 90 (142)
T PF12890_consen 55 FSDDGYGIQIQLLMYEAMKK-AELDQEIVAHCEDDEL 90 (142)
T ss_pred EecCCceeeeHHHHHHHHHH-HHcccHHHHhhccccc
Confidence 33334444556678888888 8889999999976643
|
|
| >PRK07945 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=92.96 E-value=7.2 Score=35.64 Aligned_cols=47 Identities=17% Similarity=0.102 Sum_probs=31.4
Q ss_pred hhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCC
Q 015784 287 HTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (400)
Q Consensus 287 ~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~ 334 (400)
++.++.++++|+.+.+.-.. .+. -...-++.+.+.|+++++|||.-.
T Consensus 248 ~~i~~a~~e~g~~lEINt~~-~r~~P~~~il~~a~e~G~~vtigSDAH~ 295 (335)
T PRK07945 248 EAVFAACREHGTAVEINSRP-ERRDPPTRLLRLALDAGCLFSIDTDAHA 295 (335)
T ss_pred HHHHHHHHHhCCEEEEeCCC-CCCCChHHHHHHHHHcCCeEEecCCCCC
Confidence 34567888889988765322 121 122345778889999999999653
|
|
| >PRK00912 ribonuclease P protein component 3; Provisional | Back alignment and domain information |
|---|
Probab=92.77 E-value=0.99 Score=38.97 Aligned_cols=98 Identities=12% Similarity=0.077 Sum_probs=61.1
Q ss_pred ChhHHHHHHhcCCeEEECcccccccc------Ccc----cHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhccc
Q 015784 286 NHTEIGLLSRAGVKVSHCPASAMRML------GFA----PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (400)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~p~~~~~~~------~~~----~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (400)
..+.++.++++|+.+.+.-....+.. ... .++...+.|+++.+|||...+..-.++......+.
T Consensus 120 ~~~~~~~a~~~gv~lEIn~s~~~~~~~~~r~~~~~~~~~~~~~~~~~g~piiisSdAh~~~~l~~~~~~~~l~~------ 193 (237)
T PRK00912 120 NHVLAKEAARNNVAIEFNLRDILKSRGGRRARTLSNFRDNLALARKYDFPLVLTSGAMSCYDLRSPREMIALAE------ 193 (237)
T ss_pred CHHHHHHHHHCCeEEEEEchHhhhhcccHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCcccccCCHHHHHHHHH------
Confidence 34667888888988776533211111 112 33555667999999999754422223333333332
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC-CCccccccCc
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWD-NDIGSLEAGK 398 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~-~~~G~i~~G~ 398 (400)
..|++.++++.+.+.+|.+++... .+.+.|..|.
T Consensus 194 ---------~~Gl~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 228 (237)
T PRK00912 194 ---------LFGMEEDEALKALSYYPESIIKKNRNRKNYVIEGV 228 (237)
T ss_pred ---------HcCCCHHHHHHHHHHhHHHHHHhhccCCCcccccE
Confidence 335999999999999999988554 3456676664
|
|
| >COG1387 HIS2 Histidinol phosphatase and related hydrolases of the PHP family [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=91.56 E-value=8.3 Score=33.24 Aligned_cols=62 Identities=11% Similarity=0.064 Sum_probs=36.1
Q ss_pred hhHHHHHHhcCCeEEECccccccccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHH
Q 015784 287 HTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLA 348 (400)
Q Consensus 287 ~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~ 348 (400)
.+.++.+.+.|+.+.+.-..........-++.+.+.|+.+++|||.-.+.....+......+
T Consensus 150 ~~~~~~~~~~g~aleins~~~~~~~~~~~~~~~~e~G~~~~i~tDaH~~~~lg~~~~~~~~~ 211 (237)
T COG1387 150 EELIELAEKNGKALEINSRPGRLDPNSEILRLARELGVKLAIGTDAHRPGDLGDMYFGVKIA 211 (237)
T ss_pred HHHHHHHHHhCcEEeecCCcCccCchHHHHHHHHHhCCeEEeecCcCChhhcccchHHHHHH
Confidence 35577777788877654221111122334566778899999999975443334444444443
|
|
| >COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.65 E-value=1.4 Score=38.53 Aligned_cols=108 Identities=14% Similarity=0.198 Sum_probs=64.3
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHH-HHhHh--CCCCCCeeeEEecCCChhHHHHHHhcC-
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT-FLDKI--EFLQNNLLSAHTVWVNHTEIGLLSRAG- 297 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~-~l~~~--~~~~~~~~~~h~~~~~~~~i~~~~~~~- 297 (400)
-+.+..+++..++.|+++.+|-......++.+.+ ...-++ .|..+ .+..-+.+++|+.. .+.++.+++.+
T Consensus 117 ~~~~~pvle~Mq~~gmpLlvHGEvt~~~vDifdr----E~~Fi~~vl~pl~~~fP~LKIV~EHiTT--~dav~~v~~~~~ 190 (344)
T COG0418 117 IEKIYPVLEAMQKIGMPLLVHGEVTDAEVDIFDR----EAAFIESVLEPLRQRFPKLKIVLEHITT--KDAVEYVKDANN 190 (344)
T ss_pred HHHHHHHHHHHHHcCCeEEEecccCCccccchhh----HHHHHHHHHHHHHhhCCcceEEEEEecc--HHHHHHHHhcCc
Confidence 4567788888899999999998776665542221 111222 33222 23334678899876 34455555554
Q ss_pred -CeEEECccccc-----cc-cC----------------cccHHHHHHcC-CcEEEcCCCCCC
Q 015784 298 -VKVSHCPASAM-----RM-LG----------------FAPIKEMLHAD-ICVSLGTDGAPS 335 (400)
Q Consensus 298 -~~~~~~p~~~~-----~~-~~----------------~~~~~~~~~~G-v~v~~gtD~~~~ 335 (400)
+..+++|..-+ .+ .+ ...++.+.-.| -++.+|||+.|.
T Consensus 191 nlaATIT~hHL~~nrnd~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH 252 (344)
T COG0418 191 NLAATITPHHLLLNRNDMLVGGIRPHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPH 252 (344)
T ss_pred ceeeEeehhheeeehhhhhcCCCCcceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCC
Confidence 66777776532 11 22 12344444455 689999998754
|
|
| >cd01301 rDP_like renal dipeptidase (rDP), best studied in mammals and also called membrane or microsomal dipeptidase, is a membrane-bound glycoprotein hydrolyzing dipeptides and is involved in hydrolytic metabolism of penem and carbapenem beta-lactam antibiotics | Back alignment and domain information |
|---|
Probab=84.97 E-value=10 Score=34.23 Aligned_cols=129 Identities=13% Similarity=0.060 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEec---------CCChhHHHHHH
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLLS 294 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~---------~~~~~~i~~~~ 294 (400)
.=+++++.+.+.|+.|.+-........ +.+.. ...+.+++|.. .+++++++.++
T Consensus 155 ~G~~vv~~mn~lGmiiDvSH~s~~~~~--------------dv~~~---s~~PviaSHsn~ral~~h~RNltD~~i~~ia 217 (309)
T cd01301 155 FGKELVREMNRLGIIIDLSHLSERTFW--------------DVLDI---SNAPVIASHSNARALCDHPRNLTDAQLKAIA 217 (309)
T ss_pred HHHHHHHHHHHcCCEEEcCCCCHHHHH--------------HHHHh---cCCCEEEeccChHHhcCCCCCCCHHHHHHHH
Confidence 456777778888988855433222211 11111 12345556644 46889999999
Q ss_pred hcCCeEEECccccccc-cCcccHHHH-------HH-cCC-cEEEcCCCCCCCC---CCCHHHHHHH-HHHHhcccccccC
Q 015784 295 RAGVKVSHCPASAMRM-LGFAPIKEM-------LH-ADI-CVSLGTDGAPSNN---RMSIVDEMYL-ASLINKGREVFAN 360 (400)
Q Consensus 295 ~~~~~~~~~p~~~~~~-~~~~~~~~~-------~~-~Gv-~v~~gtD~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~ 360 (400)
++|-.+-++....+-. .....+..+ .+ .|+ .|++|||.-.... ++.-...+.. ...+.
T Consensus 218 ~~GGvigi~~~~~fl~~~~~~~~~~~~~hi~~i~~l~G~dhVgiGsDfdg~~~~~~gl~~~~~~~~l~~~L~-------- 289 (309)
T cd01301 218 ETGGVIGVNFYPAFLSPGADATLDDVVRHIDYIVDLIGIDHVGLGSDFDGIGGTPGGLEDVSDLPNLTAELL-------- 289 (309)
T ss_pred HcCCEEEEeeeHHHhCCCCCCCHHHHHHHHHHHHHhcCCCeEEECcccCCCCCCccccCCHHHHHHHHHHHH--------
Confidence 9987765543332211 112222222 22 355 5999999642211 1111222222 11111
Q ss_pred CCCCCCCCCHHHHHHHHhHHH
Q 015784 361 GTTDPAALPAETVLRMATING 381 (400)
Q Consensus 361 ~~~~~~~l~~~~al~~~T~~~ 381 (400)
+.|++.+++-+++-.|.
T Consensus 290 ----~rG~s~~~i~~i~g~N~ 306 (309)
T cd01301 290 ----ERGYSEEEIEKIAGGNF 306 (309)
T ss_pred ----HcCCCHHHHHHHHhhch
Confidence 34688888877776654
|
Although the biological function of the enzyme is still unknown, it has been suggested to play a role in the renal glutathione metabolism. |
| >PRK06740 histidinol-phosphatase; Validated | Back alignment and domain information |
|---|
Probab=84.26 E-value=33 Score=31.32 Aligned_cols=44 Identities=11% Similarity=0.200 Sum_probs=28.3
Q ss_pred HHHHHhcCCeEEECccccccc--cCccc----HHHHHHcCCcEEEcCCCC
Q 015784 290 IGLLSRAGVKVSHCPASAMRM--LGFAP----IKEMLHADICVSLGTDGA 333 (400)
Q Consensus 290 i~~~~~~~~~~~~~p~~~~~~--~~~~~----~~~~~~~Gv~v~~gtD~~ 333 (400)
++.+++.|+.+.+.-.+..+- ....| ++.+.+.|+++++|||.-
T Consensus 245 ~~a~~~~g~~lEINt~~~~r~~~~e~yP~~~il~~~~e~Gv~~tlgSDAH 294 (331)
T PRK06740 245 ARALVETNTATEINAGLYYRYPVREMCPSPLFLQVLAKHEVPITLSSDAH 294 (331)
T ss_pred HHHHHHcCCEEEEECccccCCCCCCCCcCHHHHHHHHHCCCeEEEeeCCC
Confidence 366677888877653322221 11223 577788899999999964
|
|
| >COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=83.71 E-value=29 Score=30.18 Aligned_cols=138 Identities=13% Similarity=0.102 Sum_probs=82.8
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~ 298 (400)
..+.+.|..+++.|++.+++|..|........- . ...+++...|+-. ..++-|.....- ......|+
T Consensus 141 ~~~n~vl~~a~elA~dvdc~vqLHtes~~~~~~--~-------~i~~~ak~~G~~~-~~VVkHha~p~v---~~~~~~Gi 207 (285)
T COG1831 141 EASNEVLEYAMELAKDVDCAVQLHTESLDEETY--E-------EIAEMAKEAGIKP-YRVVKHHAPPLV---LKCEEVGI 207 (285)
T ss_pred HHHHHHHHHHHHHhhcCCCcEEEecCCCChHHH--H-------HHHHHHHHhCCCc-ceeEeecCCccc---hhhhhcCc
Confidence 445567899999999999999999876554211 1 1235556666633 334455443221 22222455
Q ss_pred eEEECccccccccCcccHHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHH-HHHhcccccccCCCCCCCCCCHHHH
Q 015784 299 KVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLA-SLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 299 ~~~~~p~~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
..++ |. +...+....+.|-++.+=||+.- ++--+.++.-.+.. ..+.+ ..++.+.+
T Consensus 208 ~pSV-~a------sr~~v~~a~~~g~~FmmETDyIDDp~RpgavL~PktVPrr~~~i~~~------------g~~~ee~v 268 (285)
T COG1831 208 FPSV-PA------SRKNVEDAAELGPRFMMETDYIDDPRRPGAVLGPKTVPRRTREILEK------------GDLTEEDV 268 (285)
T ss_pred CCcc-cc------cHHHHHHHHhcCCceEeecccccCcccCCCcCCccchhHHHHHHHHh------------cCCcHHHH
Confidence 4322 11 22257888899999999999751 11223333223222 22222 23789999
Q ss_pred HHHHhHHHHHHcCCC
Q 015784 374 LRMATINGAKSVLWD 388 (400)
Q Consensus 374 l~~~T~~~A~~lg~~ 388 (400)
-+..-.||.++.|++
T Consensus 269 y~i~~E~pe~VYg~~ 283 (285)
T COG1831 269 YRIHVENPERVYGIE 283 (285)
T ss_pred HHHHHhCHHHHhCcc
Confidence 999999999999985
|
|
| >PRK08609 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=83.20 E-value=51 Score=32.71 Aligned_cols=44 Identities=18% Similarity=0.245 Sum_probs=30.3
Q ss_pred HHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCC
Q 015784 290 IGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (400)
Q Consensus 290 i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~ 334 (400)
++.+++.|+.+.+.-.+ .+. .....++.+.+.|+++++|||...
T Consensus 485 ~~~a~~~G~~lEINa~~-~r~~~~~~~~~~~~e~Gv~i~igSDAH~ 529 (570)
T PRK08609 485 IELAKETNTALELNANP-NRLDLSAEHLKKAQEAGVKLAINTDAHH 529 (570)
T ss_pred HHHHHHhCCEEEEcCCc-cccCccHHHHHHHHHcCCEEEEECCCCC
Confidence 45557789887765332 222 233456888999999999999643
|
|
| >COG1603 RPP1 RNase P/RNase MRP subunit p30 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=82.64 E-value=24 Score=29.98 Aligned_cols=97 Identities=16% Similarity=0.173 Sum_probs=58.6
Q ss_pred ChhHHHHHHhcCCeEEECccccccccCc----------ccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhccc
Q 015784 286 NHTEIGLLSRAGVKVSHCPASAMRMLGF----------APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (400)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~p~~~~~~~~~----------~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (400)
+...++.++++++.+...-...++..+. ..++...+-++++.++||...+.....+.+-+.++..+
T Consensus 115 dh~~a~laa~~~valeisl~~ll~~~g~~Ra~~l~~lr~~lrl~rk~~v~ivvtS~A~s~~elrsP~dv~sl~~~l---- 190 (229)
T COG1603 115 DHVLARLAAEKGVALEISLRPLLRSSGYRRARLLSFLRSLLRLARKYDVPIVVTSDAESPLELRSPRDVISLAKVL---- 190 (229)
T ss_pred cHHHHHHHHhcCceEEEehHHhhccchhHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCChhhhcChhhHHHHHHHh----
Confidence 4566788888888765543322221111 13344455699999999987442233333333333333
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC--CccccccC
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDN--DIGSLEAG 397 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~--~~G~i~~G 397 (400)
|+...||-.+.+.+|.++|-... +-|.|.+|
T Consensus 191 -----------G~e~~ea~~~~~~~p~~iL~~~~~~~~~~i~~g 223 (229)
T COG1603 191 -----------GLEDDEAKKSLSEYPRLILRNRNRIRDGFIVPG 223 (229)
T ss_pred -----------CCCHHHHHHHHHHhHHHHHHHhhhcCCceEEec
Confidence 48899999999999999996221 22455554
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 400 | ||||
| 3hpa_A | 479 | Crystal Structure Of An Amidohydrolase Gi:44264246 | 1e-42 | ||
| 4dyk_A | 451 | Crystal Structure Of An Adenosine Deaminase From Ps | 2e-39 | ||
| 3lnp_A | 468 | Crystal Structure Of Amidohydrolase Family Protein | 6e-37 | ||
| 4dzh_A | 472 | Crystal Structure Of An Adenosine Deaminase From Xa | 2e-33 | ||
| 4f0r_A | 447 | Crystal Structure Of An Adenosine Deaminase Homolog | 4e-32 | ||
| 1p1m_A | 406 | Structure Of Thermotoga Maritima Amidohydrolase Tm0 | 4e-31 | ||
| 1j6p_A | 418 | Crystal Structure Of Metal-Dependent Hydrolase Of C | 1e-27 | ||
| 2paj_A | 492 | Crystal Structure Of An Amidohydrolase From An Envi | 1e-24 | ||
| 2uz9_A | 476 | Human Guanine Deaminase (Guad) In Complex With Zinc | 5e-21 | ||
| 3ls9_A | 456 | Crystal Structure Of Atrazine Chlorohydrolase Trzn | 8e-20 | ||
| 3lsb_A | 456 | Crystal Structure Of The Mutant E241q Of Atrazine C | 2e-19 | ||
| 3e0l_A | 455 | Computationally Designed Ammelide Deaminase Length | 4e-19 | ||
| 2i9u_A | 439 | Crystal Structure Of Guanine Deaminase From C. Acet | 2e-15 | ||
| 2ood_A | 475 | Crystal Structure Of Guanine Deaminase From Bradyrh | 9e-13 | ||
| 3v7p_A | 427 | Crystal Structure Of Amidohydrolase Nis_0429 (Targe | 1e-08 |
| >pdb|3HPA|A Chain A, Crystal Structure Of An Amidohydrolase Gi:44264246 From An Evironmental Sample Of Sargasso Sea Length = 479 | Back alignment and structure |
|
| >pdb|4DYK|A Chain A, Crystal Structure Of An Adenosine Deaminase From Pseudomonas Aeruginosa Pao1 (Target Nysgrc-200449) With Bound Zn Length = 451 | Back alignment and structure |
|
| >pdb|3LNP|A Chain A, Crystal Structure Of Amidohydrolase Family Protein Olei01672_1_465 From Oleispira Antarctica Length = 468 | Back alignment and structure |
|
| >pdb|4DZH|A Chain A, Crystal Structure Of An Adenosine Deaminase From Xanthomonas Campestris (Target Nysgrc-200456) With Bound Zn Length = 472 | Back alignment and structure |
|
| >pdb|4F0R|A Chain A, Crystal Structure Of An Adenosine Deaminase Homolog From Chromobacterium Violaceum (Target Nysgrc-019589) Bound Zn And 5'- Methylthioadenosine (Unproductive Complex) Length = 447 | Back alignment and structure |
|
| >pdb|1P1M|A Chain A, Structure Of Thermotoga Maritima Amidohydrolase Tm0936 Bound To Ni And Methionine Length = 406 | Back alignment and structure |
|
| >pdb|1J6P|A Chain A, Crystal Structure Of Metal-Dependent Hydrolase Of CytosinedemaniaseCHLOROHYDROLASE FAMILY (TM0936) FROM THERMOTOGA Maritima At 1.9 A Resolution Length = 418 | Back alignment and structure |
|
| >pdb|2PAJ|A Chain A, Crystal Structure Of An Amidohydrolase From An Environmental Sample Of Sargasso Sea Length = 492 | Back alignment and structure |
|
| >pdb|2UZ9|A Chain A, Human Guanine Deaminase (Guad) In Complex With Zinc And Its Product Xanthine. Length = 476 | Back alignment and structure |
|
| >pdb|3LS9|A Chain A, Crystal Structure Of Atrazine Chlorohydrolase Trzn From Arthrobacter Aurescens Tc1 Complexed With Zinc Length = 456 | Back alignment and structure |
|
| >pdb|3LSB|A Chain A, Crystal Structure Of The Mutant E241q Of Atrazine Chlorohydrolase Trzn From Arthrobacter Aurescens Tc1 Complexed With Zinc And Ametrin Length = 456 | Back alignment and structure |
|
| >pdb|3E0L|A Chain A, Computationally Designed Ammelide Deaminase Length = 455 | Back alignment and structure |
|
| >pdb|2I9U|A Chain A, Crystal Structure Of Guanine Deaminase From C. Acetobutylicum With Bound Guanine In The Active Site Length = 439 | Back alignment and structure |
|
| >pdb|2OOD|A Chain A, Crystal Structure Of Guanine Deaminase From Bradyrhizobium Japonicum Length = 475 | Back alignment and structure |
|
| >pdb|3V7P|A Chain A, Crystal Structure Of Amidohydrolase Nis_0429 (Target Efi-500396) From Nitratiruptor Sp. Sb155-2 Length = 427 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 400 | |||
| 3lnp_A | 468 | Amidohydrolase family protein OLEI01672_1_465; TIM | 1e-144 | |
| 4dzh_A | 472 | Amidohydrolase; adenosine deaminase, nysgrc, struc | 1e-139 | |
| 3h4u_A | 479 | Amidohydrolase; signature of Zn ligands, structura | 1e-139 | |
| 4dyk_A | 451 | Amidohydrolase; adenosine deaminase, nysgrc, struc | 1e-139 | |
| 4f0r_A | 447 | 5-methylthioadenosine/S-adenosylhomocysteine DEAM; | 1e-138 | |
| 1p1m_A | 406 | Hypothetical protein TM0936; putative metal depend | 1e-135 | |
| 3ls9_A | 456 | Triazine hydrolase; atrazine chlorohydrolase TRZN; | 1e-134 | |
| 2paj_A | 492 | Putative cytosine/guanine deaminase; NYSGXRC, PSI- | 1e-131 | |
| 3v7p_A | 427 | Amidohydrolase family protein; iron binding site, | 1e-119 | |
| 2imr_A | 420 | Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, | 1e-100 | |
| 2i9u_A | 439 | Cytosine/guanine deaminase related protein; protei | 4e-91 | |
| 4aql_A | 476 | Guanine deaminase; hydrolase, purine metabolism; H | 1e-90 | |
| 2ood_A | 475 | BLR3880 protein; PSI-II, PSI-2, guanine deaminase, | 3e-90 | |
| 3mdu_A | 453 | N-formimino-L-glutamate iminohydrolase; amonohydra | 9e-87 | |
| 4f0l_A | 458 | Amidohydrolase; ssgcid, structural genomics, seatt | 2e-81 | |
| 2bb0_A | 421 | Imidazolonepropionase; TIM barrel, hydrolase; 2.00 | 2e-64 | |
| 2puz_A | 419 | Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino | 1e-54 | |
| 2q09_A | 416 | Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio | 1e-36 | |
| 1ra0_A | 430 | Cytosine deaminase; alpha-beta barrel, hexamer, co | 1e-33 | |
| 2qt3_A | 403 | N-isopropylammelide isopropyl amidohydrolase; N-is | 1e-32 | |
| 2ogj_A | 417 | Dihydroorotase; TIM barrel, binuclear zinc, imidaz | 4e-23 | |
| 2vun_A | 386 | Enamidase; nicotinate degradation, binuclear metal | 1e-20 | |
| 3ooq_A | 396 | Amidohydrolase; structural genomics, protein struc | 2e-15 | |
| 2p9b_A | 458 | Possible prolidase; protein structure initiative I | 4e-13 | |
| 2qs8_A | 418 | XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p | 8e-11 | |
| 3icj_A | 534 | Uncharacterized metal-dependent hydrolase; structu | 1e-10 | |
| 3nqb_A | 608 | Adenine deaminase 2; PSI-II, structural genomics, | 2e-10 | |
| 2r8c_A | 426 | Putative amidohydrolase; unknown source, sargasso | 8e-10 | |
| 2vhl_A | 396 | N-acetylglucosamine-6-phosphate deacetylase; N- ac | 2e-09 | |
| 3ggm_A | 81 | Uncharacterized protein BT9727_2919; bacillus cere | 8e-09 | |
| 3be7_A | 408 | Zn-dependent arginine carboxypeptidase; unknown so | 1e-08 | |
| 3iv8_A | 381 | N-acetylglucosamine-6-phosphate deacetylase; IDP01 | 3e-08 | |
| 3gnh_A | 403 | L-lysine, L-arginine carboxypeptidase CC2672; N-me | 1e-07 | |
| 2ics_A | 379 | Adenine deaminase; TIM barrel, binuclear zinc, ade | 2e-07 | |
| 1yrr_A | 382 | N-acetylglucosamine-6-phosphate deacetylase; (beta | 3e-07 | |
| 2gwn_A | 452 | Dihydroorotase; zinc-binding prote structural geno | 3e-07 | |
| 3feq_A | 423 | Putative amidohydrolase; unknown source, sargasso | 3e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-07 | |
| 3hm7_A | 448 | Allantoinase; metallo-dependent hydrolase, protein | 1e-06 | |
| 1o12_A | 376 | N-acetylglucosamine-6-phosphate deacetylase; struc | 2e-06 | |
| 1xrt_A | 467 | Dihydroorotase, dhoase; amidohydrolase, metalloenz | 2e-06 | |
| 1gkr_A | 458 | Hydantoinase, non-ATP dependent L-selective hydant | 1e-05 | |
| 3mpg_A | 428 | Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus | 1e-05 | |
| 3e74_A | 473 | Allantoinase; (beta/alpha)8-barrel domain, small b | 1e-05 | |
| 1gkp_A | 458 | Hydantoinase; hydrolase, dihydropyrimidinase, cycl | 2e-05 | |
| 3gri_A | 424 | Dihydroorotase, dhoase; hydrolase, IDP00795, metal | 2e-05 | |
| 3dc8_A | 490 | Dihydropyrimidinase; TIM-barrel, hydrolase; HET: K | 2e-05 | |
| 2fty_A | 559 | Dihydropyrimidinase; alpha/beta barrel, beta-sandw | 2e-05 | |
| 1onw_A | 390 | Isoaspartyl dipeptidase; amidohydrolase, hydrolase | 3e-05 | |
| 2ftw_A | 521 | Dihydropyrimidine amidohydrolase; (beta-alpha)8-ba | 3e-05 | |
| 3sfw_A | 461 | Dihydropyrimidinase; hydrolase, zinc binding; HET: | 4e-05 | |
| 1rk6_A | 496 | D-aminoacylase; TIM barrel, beta barrel, insertion | 6e-05 | |
| 1nfg_A | 457 | D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2 | 7e-05 | |
| 2vr2_A | 541 | Dihydropyrimidinase; hydantoinase, metal-binding, | 8e-05 | |
| 2z00_A | 426 | Dihydroorotase; zinc binding protein, hydrolase, m | 1e-04 | |
| 2vm8_A | 501 | Dihydropyrimidinase-related protein 2; neurogenesi | 3e-04 |
| >3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} Length = 468 | Back alignment and structure |
|---|
Score = 417 bits (1073), Expect = e-144
Identities = 110/409 (26%), Positives = 190/409 (46%), Gaps = 33/409 (8%)
Query: 4 NSSGGGSSSGSLGSSSTMILHNAVIVTMD------KESRVFRNGGVFVVQDRIKAIGQSA 57
+ S + + + +++ I+ ++ S + + + + I AI +
Sbjct: 8 SESNLAQRQSQPKAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQS 67
Query: 58 DILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESN 117
A + +DL Q+L+PG+VN H H + L +G+ADD+ LMTWL + +WP E+
Sbjct: 68 SCQIP----ATETLDLGQQVLMPGWVNAHGHAAMSLFRGLADDLPLMTWLQEHVWPAEAQ 123
Query: 118 MT-EEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEG 176
E T L E+I SG T FA+ + + +A G+RA +D
Sbjct: 124 HVDEHFVKQGTELAIAEMIQSGTTTFADMYF-YPQQSGEAALAAGIRAVCFAPVLD---- 178
Query: 177 LPASWAVRTTDDCIQSQKEL---YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233
P ++A + D+ I+ E + H G ++I FG +D L E ++
Sbjct: 179 FPTNYA-QNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSD 237
Query: 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHG--TVTFLDKIEFLQNNLLSAHTVWVNHTEIG 291
+ + +H+ E +E ++T L I FL + H V+ +I
Sbjct: 238 QLDMPVQIHLHETDFEVSESLET----FNKRPTQRLADIGFLNERVSCVHMTQVDDGDIK 293
Query: 292 LLSRAGVKVSHCPASAMRML-GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASL 350
+L + G + HCP S +++ GF PI ++ A+I +++GTDGA SNN + + E A+L
Sbjct: 294 ILQKTGASIIHCPESNLKLASGFCPIAKLSAANIPLAIGTDGAASNNDLDMFSETKTAAL 353
Query: 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
+ KG + D +A+PA L MAT+ GA+++ D+ GSL+ GK
Sbjct: 354 LAKGV------SQDASAIPAIEALTMATLGGARALGIDDITGSLKPGKA 396
|
| >4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV} Length = 472 | Back alignment and structure |
|---|
Score = 405 bits (1043), Expect = e-139
Identities = 104/383 (27%), Positives = 170/383 (44%), Gaps = 24/383 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ +V ++ + V + V V I A+ +AD +F+ + + L+P
Sbjct: 16 LLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFA--PARTVSRPDAALMP 73
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMT-EEDSYISTLLCGIELIHSGV 139
G VN H H L +G+ADD+ LM WL IWP E+ + E T L E++ G
Sbjct: 74 GLVNAHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGT 133
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
TC E A + G RA + +D P +WA + D+ EL+ +
Sbjct: 134 TCVNE-NYFFADVQAAVYKQHGFRALVGAVIID----FPTAWA-SSDDEYFARAGELHDQ 187
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259
D I F D R +A + +H+H E E +
Sbjct: 188 WRD--DPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQ--- 242
Query: 260 DHG--TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPI 316
+G + LD++ + + L++ H + EI L + GV V HCP S +++ GF P
Sbjct: 243 -YGQRPLARLDRLGLVNDRLIAVHMTQLTEAEIHLCAERGVSVVHCPESNLKLASGFCPA 301
Query: 317 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376
+ A + +++GTDG SNN + + E A+++ K D AL A T LR
Sbjct: 302 CALQRASVNLAIGTDGCASNNDLDMFSENRTAAILAKAV------ANDATALDAATTLRA 355
Query: 377 ATINGAKSVLWDNDIGSLEAGKK 399
AT+ GA+++ + + IGS+E GK+
Sbjct: 356 ATLGGARALGFGDRIGSIEVGKQ 378
|
| >4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa} Length = 451 | Back alignment and structure |
|---|
Score = 402 bits (1036), Expect = e-139
Identities = 114/383 (29%), Positives = 182/383 (47%), Gaps = 25/383 (6%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++L IV ++ V R+ + + +I + ++ A +I +L +L P
Sbjct: 10 LLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHG---ATEIRELPGMLLAP 66
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDS-YISTLLCGIELIHSGV 139
G VN H H++ L +G+ADD+ LMTWL D IWP E ED T L E + G+
Sbjct: 67 GLVNAHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGI 126
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
TCF++ + + V G+RA + +D P A R + + I+ L+
Sbjct: 127 TCFSDMYF-YPQAICGVVHDSGVRAQVAIPVLD----FPIPGA-RDSAEAIRQGMALFDD 180
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259
H RIRI FG +D L + + E I MHV E +E + M+
Sbjct: 181 LKH--HPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMER--- 235
Query: 260 DHG--TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPI 316
+G + L ++ L + H V++ ++ +L V HCP S +++ GF P+
Sbjct: 236 -NGERPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLASGFCPV 294
Query: 317 KEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376
+++ A + V++GTDGA SNN + ++ E A+L+ K AL A LRM
Sbjct: 295 EKLWQAGVNVAIGTDGAASNNDLDLLGETRTAALLAKAV------YGQATALDAHRALRM 348
Query: 377 ATINGAKSVLWDNDIGSLEAGKK 399
AT+NGA+++ + IGSLEAGK
Sbjct: 349 ATLNGARALGLERLIGSLEAGKA 371
|
| >4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A* Length = 447 | Back alignment and structure |
|---|
Score = 401 bits (1033), Expect = e-138
Identities = 108/382 (28%), Positives = 190/382 (49%), Gaps = 25/382 (6%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
I+ I+T++ + V N + + +I AI +AD AD+ ++L +L+PG
Sbjct: 9 IISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGLE---ADERLELPDHVLMPG 65
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDS-YISTLLCGIELIHSGVT 140
+N H H++ L +G+ADD LM WL + IWP E +D + +LL E+I G T
Sbjct: 66 LINLHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTT 125
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
+ + + +A+A G+R + S ++ P ++A DD I K + +
Sbjct: 126 TINDMYF-YNAAVARAGLASGMRTFVGCSILE----FPTNYA-SNADDYI--AKGMAERS 177
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
+ + +D + +A + IH H+ E E +
Sbjct: 178 QFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKE---- 233
Query: 261 HG--TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIK 317
HG + L ++ L L++AH V +N E+ L +R G+ +H PAS M++ G +P+
Sbjct: 234 HGQRPLARLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASGISPVS 293
Query: 318 EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377
+++ A + V +GTDGA SNN++ ++ E LA+L+ K T DP ++PA +RMA
Sbjct: 294 KLMDAGVAVGIGTDGAASNNKLDMLAETRLAALLAKVG------TLDPTSVPAAAAIRMA 347
Query: 378 TINGAKSVLWDNDIGSLEAGKK 399
T+NGA+++ + +GS++ GK+
Sbjct: 348 TLNGARALGIADKVGSVKVGKQ 369
|
| >1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A Length = 406 | Back alignment and structure |
|---|
Score = 391 bits (1008), Expect = e-135
Identities = 99/380 (26%), Positives = 168/380 (44%), Gaps = 44/380 (11%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
MI+ N +I+ G V + IK + Q +DL ++++P
Sbjct: 1 MIIGNCLILKDFS--SEPFWGAVEIENGTIKRVLQGE---------VKVDLDLSGKLVMP 49
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
NTH H L +G+A+D+ WL ++ P E +TE+ +Y T+L +E+ G+
Sbjct: 50 ALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIA 109
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
F + H +AKAV G+RA L + +D ++ +LY +
Sbjct: 110 GFVDMYF-HEEWIAKAVRDFGMRALLTRGLVDSNG---------DDGGRLEENLKLYNE- 158
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
+ +GRI + FG ++ L D A+ + +H+ E E
Sbjct: 159 WNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEY--------- 209
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEM 319
+ + I + ++AH V + G+L VSH PAS +++ G AP++ M
Sbjct: 210 --DLEDILNIGLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNGIAPVQRM 267
Query: 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 379
+ + V+LGTDGA SNN +++ EM LASL+ K + +P L T L+M T
Sbjct: 268 IEHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKAQ--------NPRNLDVNTCLKMVTY 319
Query: 380 NGAKSVLWDNDIGSLEAGKK 399
+GA+++ + G +E G
Sbjct: 320 DGAQAMGF--KSGKIEEGWN 337
|
| >3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A* Length = 456 | Back alignment and structure |
|---|
Score = 392 bits (1009), Expect = e-134
Identities = 96/401 (23%), Positives = 160/401 (39%), Gaps = 35/401 (8%)
Query: 21 MIL-HNA-VIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
MIL ++T D + R + + + +I A+G+ + ID + I
Sbjct: 1 MILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSDRS-----VSRTIDGRGMIA 55
Query: 79 LPGFVNTHVHTSQQLAKGIA--DDVDLMTWLHDRI-----WPYESNMTEEDSYISTLLCG 131
LPG +N+H H + + I + V + +WL + W + +
Sbjct: 56 LPGLINSHQHLYEGAMRAIPQLERVTMASWLEGVLTRSAGWWRDGKFGPDVIREVARAVL 115
Query: 132 IELIHSGVTCFAE--------AGGQHVSEMAKAVELLGLRACLVQSTMDCGE---GLPAS 180
+E + G+T A+ ++ +A LG+R +S+M G+ G
Sbjct: 116 LESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIRFHAARSSMTLGKSEGGFCDD 175
Query: 181 WAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239
V D +Q L ++H G +RI G + L MA ++ +
Sbjct: 176 LFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRL 235
Query: 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299
H H E FL+K + + + AH V EI + AGV
Sbjct: 236 HTHFYEPLDAGMSD---HLYGMTPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVA 292
Query: 300 VSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVF 358
++H A +RM G API+E L A I V GT G+ SN+ +++ ++ LA+L ++
Sbjct: 293 IAHLIAPDLRMGWGLAPIREYLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHRPA--- 349
Query: 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
+ L A +LRMAT A+ L D+G LE G+
Sbjct: 350 -DPNEPEKWLSARELLRMATRGSAE-CLGRPDLGVLEEGRA 388
|
| >2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9 Length = 492 | Back alignment and structure |
|---|
Score = 384 bits (989), Expect = e-131
Identities = 99/421 (23%), Positives = 172/421 (40%), Gaps = 43/421 (10%)
Query: 11 SSGSLGSSSTMILHNAVIVTMDK-----ESRVFRNGGVFVVQDRIKAIGQSADILQQFSQ 65
S + + + ++ NA + + + +V D I AIG A +
Sbjct: 2 SLTTYDTQPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP------R 55
Query: 66 MADQIIDLQSQILLPGFVNTHVHTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDS 123
+ I+D ++ P +VNTH H Q L KG D L WL + + + E
Sbjct: 56 PGETIVDATDCVIYPAWVNTHHHLFQSLLKGEPAGLDATLTPWLAATPYRFRALFDERRF 115
Query: 124 YISTLLCGIELIHSGVTCFAE--------AGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175
++ + IEL SG A+ + + + E LGLR L++
Sbjct: 116 RLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLLRGGATQTR 175
Query: 176 ----GLPASWAVRTTDDCIQSQKELYAKHHHAADGR-IRIWFGIRQIM-NATDRLLLETR 229
LP + T D + + L A++H A+ R+ ++ + + R + ET
Sbjct: 176 QLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETA 235
Query: 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG--TVTFLDKIEFLQNNLLSAHTVWVNH 287
+AR +H H++E +G V F + ++L +++ AH V V+
Sbjct: 236 AVARRLGLRMHSHLSETVGYQDSAYSM----YGKSPVAFCGEHDWLGSDVWYAHLVKVDA 291
Query: 288 TEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMY 346
EI LL++ G V+HCP S R+ G P++EM A + VS+G DGA SN ++ E++
Sbjct: 292 DEIALLAQTGTGVAHCPQSNGRLGSGICPVREMADAGVPVSIGVDGAASNEAADMISEVH 351
Query: 347 LASLINKGR--------EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398
+ L + R + A V+ T GA+ V+ +++G + G
Sbjct: 352 MTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGAR-VMGLDEVGKVAVGY 410
Query: 399 K 399
Sbjct: 411 A 411
|
| >3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP} Length = 427 | Back alignment and structure |
|---|
Score = 351 bits (902), Expect = e-119
Identities = 70/391 (17%), Positives = 137/391 (35%), Gaps = 43/391 (10%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
I+ I+T + ++ V +I+AI ++++++ + ++ +LLPG
Sbjct: 3 IIKPFAILTPQ---TIIQDKAV-AFDKKIEAIDTVENLIKKYP--NAAVEHDENSLLLPG 56
Query: 82 FVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTC 141
F N H+H K D + WL+ I E + D +I +G T
Sbjct: 57 FANPHLHLEFSANKATLQYGDFIPWLYSVIRHREDLLPLCD-GACLEQTLSSIIQTGTTA 115
Query: 142 FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHH 201
E +A L+ + T D S E + +
Sbjct: 116 IGAIS--SYGEDLQACIDSALKVVYFNEVIGSNA--------ATADVMYASFLERFHQSK 165
Query: 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT----- 256
+ R + I + L D+A+++ + + +H E E + +
Sbjct: 166 KHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFA 225
Query: 257 -----RKVDHGTVTFLDKI--EFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 309
V F + + L H VW N EI ++ + HCP S
Sbjct: 226 KFFKEFLNQTRPVNDTKSFLELFKELHTLFVHMVWANEEEIQTIASYNAHIIHCPISNRL 285
Query: 310 M-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAAL 368
+ G ++++ I ++ TDG SN +++ +E+ A ++ A
Sbjct: 286 LGNGVLDLEKI--KSIPYAIATDGLSSNYSLNMYEELKAALFVHPN---------KEATT 334
Query: 369 PAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
A+ ++ AT G ++ + + G + GK
Sbjct: 335 FAKELIIRATKAGYDALGF--EGGEIAVGKD 363
|
| >2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16 Length = 420 | Back alignment and structure |
|---|
Score = 303 bits (777), Expect = e-100
Identities = 67/426 (15%), Positives = 126/426 (29%), Gaps = 62/426 (14%)
Query: 3 TNSSGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQ 62
T S + + + + +L V+ T GGV VV + + A G ++ +Q
Sbjct: 21 TFSEATTPDALTPDAHTPRLLTCDVLYTGM--GGAQSPGGVVVVGETVAAAGHPDELRRQ 78
Query: 63 FSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED 122
+ + ++ P VN H H + A + W+ + +
Sbjct: 79 Y---PHAAEERAGAVIAPPPVNAHTHLDMSAYEFQA--LPYFQWIPEVVIRGRHLRGVA- 132
Query: 123 SYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWA 182
+ L G + M + L L ++
Sbjct: 133 ---AAQAGADTLTRLGAGGVGDIVW-APEVMDALLAREDLSGTLYFEVLN--------PF 180
Query: 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 242
D+ + + + +R+ + RL+ D A + +H
Sbjct: 181 PDKADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIH 240
Query: 243 VAEIPYENQVVMDTRKVDHGT------------------------VTFLDKIEFLQNNLL 278
VAE P E ++ V +LD++ L
Sbjct: 241 VAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPT 300
Query: 279 SAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNN 337
H V V +I ++RAG V CP S + G A + V+LGTD S
Sbjct: 301 LVHMVNVTPDDIARVARAGCAVVTCPRSNHHLECGTFDWPAFAAAGVEVALGTDSVASGE 360
Query: 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAK----SVLWDNDIGS 393
+++ +E+ A + L ++R A G + + +
Sbjct: 361 TLNVREEVTFARQLYP-------------GLDPRVLVRAAVKGGQRVVGGRTPFLRRGET 407
Query: 394 LEAGKK 399
+ G +
Sbjct: 408 WQEGFR 413
|
| >2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9 Length = 439 | Back alignment and structure |
|---|
Score = 280 bits (718), Expect = 4e-91
Identities = 81/385 (21%), Positives = 152/385 (39%), Gaps = 21/385 (5%)
Query: 22 ILHNAVIVTMDKES-RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
I +I T + + ++ + V+ +I ++ + + + IID ++ I++P
Sbjct: 12 IFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDKYK----GNPIIDFRNNIIIP 67
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-SYISTLLCGIELIHSGV 139
G + H H SQ GI D +L+ WL++ +P E+ D + + +LI +G
Sbjct: 68 GMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGT 127
Query: 140 TCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKEL 196
T A H E+ + G+ A + + MD P + +E+
Sbjct: 128 TRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNC--PDYLT-ENYITSLNDTEEI 184
Query: 197 YAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256
K+ ++ R + + ++ L+ ++ +++ + H++E E VV
Sbjct: 185 ILKYKD-KSNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKSL 243
Query: 257 RKVDHGTVTFLDKIEFLQNN-LLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFA 314
K + DK N L AH + + EI L+ R V + HCP S + G
Sbjct: 244 HKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGSGMM 303
Query: 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374
P+++ L+ I V LG+D + + S+ + A +K + + L
Sbjct: 304 PVRKYLNLGINVVLGSDISAGHT-CSLFKVIAYAIQNSKIKWQESGK--KDMFLSTSEAF 360
Query: 375 RMATINGAKSVLWDNDIGSLEAGKK 399
MAT G +GS E G
Sbjct: 361 YMATKKGGSFF---GKVGSFEEGYD 382
|
| >4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A Length = 476 | Back alignment and structure |
|---|
Score = 280 bits (719), Expect = 1e-90
Identities = 83/396 (20%), Positives = 165/396 (41%), Gaps = 21/396 (5%)
Query: 17 SSSTMILHNAVIVTMDKES-RVFRNGGVFVVQDR-IKAIGQSAD---ILQQFSQMADQII 71
I + + V R+ + V I + +++ + +++ +I
Sbjct: 29 PPLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIR 88
Query: 72 DL-QSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-SYISTLL 129
+L + +PG V+TH+H SQ G + D+ L+ WL +P E D +
Sbjct: 89 ELSHHEFFMPGLVDTHIHASQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTR 148
Query: 130 CGIELIHSGVTC---FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT 186
+ +G T FA +A + G RA + + MD + P TT
Sbjct: 149 VVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFVGKVCMDLNDTFPE--YKETT 206
Query: 187 DDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246
++ I+ + ++ R++ R ++ ++ L+ E ++A+ I H++E
Sbjct: 207 EESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISEN 266
Query: 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPAS 306
E + V + + DK L N + AH +++ E+ + G ++HCP S
Sbjct: 267 RDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNS 326
Query: 307 AMRML-GFAPIKEMLHADICVSLGTD--GAPSNNRMSIVDEMYLASLINKGREVFANGTT 363
+ + GF + E+L ++ + LGTD G S + + + + S I
Sbjct: 327 NLSLSSGFLNVLEVLKHEVKIGLGTDVAGGYSYSMLDAIRRAVMVSNILLI------NKV 380
Query: 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
+ +L + V R+AT+ G++++ D +IG+ E GK+
Sbjct: 381 NEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKE 416
|
| >2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9 Length = 475 | Back alignment and structure |
|---|
Score = 279 bits (716), Expect = 3e-90
Identities = 77/390 (19%), Positives = 147/390 (37%), Gaps = 27/390 (6%)
Query: 28 IVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87
I +R ++G + V IKA G I +I ++ +I++PGF++ H+
Sbjct: 23 IGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAHP--GVEITHIKDRIIVPGFIDGHI 80
Query: 88 HTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-SYISTLLCGIELIHSGVTCFAEAG 146
H Q G + L+ WL I+P E + + + L+ +G T
Sbjct: 81 HLPQTRVLGAYGE-QLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFT 139
Query: 147 ---GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHA 203
E+ + +R + +D PA + T ++ + K L A++H
Sbjct: 140 SSSPVATEELFEEASRRNMRVIAGLTGIDRN--APAEFI-DTPENFYRDSKRLIAQYHD- 195
Query: 204 ADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTRKVDHG 262
GR R A+ LL + + E ++ H++E P E V+
Sbjct: 196 -KGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEHPDCQD 254
Query: 263 TVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIKEMLH 321
+ +K + + H V++++ E +S+ G V CP S + + G +
Sbjct: 255 YLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNLFLGSGLFRLGRATD 314
Query: 322 AD--ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT----------DPAALP 369
+ + +S GTD N S++ + A + +G+ + L
Sbjct: 315 PEHRVKMSFGTDVGGGNR-FSMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLS 373
Query: 370 AETVLRMATINGAKSVLWDNDIGSLEAGKK 399
T+ GA+ + D+ +G+ E GK+
Sbjct: 374 PYRGFWSVTLGGAEGLYIDDKLGNFEPGKE 403
|
| >3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A* Length = 453 | Back alignment and structure |
|---|
Score = 269 bits (691), Expect = 9e-87
Identities = 67/396 (16%), Positives = 132/396 (33%), Gaps = 40/396 (10%)
Query: 30 TMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHT 89
+ E + G V+ I A G A+I + +LPG N H H
Sbjct: 3 AIFAERALLPEGWARNVRFEISADGVLAEIRPDA---NADGAERLGGAVLPGMPNLHSHA 59
Query: 90 SQQLAKGIAD-----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAE 144
Q+ G+A+ + TW + ++ + ++ E + IE++ +G T AE
Sbjct: 60 FQRAMAGLAEVAGNPNDSFWTWR-ELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAE 118
Query: 145 --------------AGGQHVSEMAKAVELLGLRACLVQSTMDCGE--GLPASWAVRTTDD 188
+ +++A G+ L+ G PAS R +
Sbjct: 119 FHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLPVLYSHAGFGGQPASEGQRRFIN 178
Query: 189 CIQSQKELYAKHHHAADG-RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247
++ EL + + + + T + + + +H+H+AE
Sbjct: 179 GSEAYLELLQRLRAPLEAAGHSLGLCFHSLRAVTPQQIATVLAAGHD-DLPVHIHIAEQQ 237
Query: 248 YENQVVMDTRKVDHGT--VTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPA 305
E G + +L + + H + E+ ++R+G C +
Sbjct: 238 KEVDDCQAW----SGRRPLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAGLCLS 293
Query: 306 SAMRML--GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 363
+ L G P + L + +G+D S + + + + + +
Sbjct: 294 TEAN-LGDGIFPATDFLAQGGRLGIGSDSHVSLSVVEELRWLEYGQRLRDRKRNRL--YR 350
Query: 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
D + T+ A GA+ L IGSL G++
Sbjct: 351 DDQPMIGRTLYDAALAGGAQ-ALGQ-PIGSLAVGRR 384
|
| >4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus} Length = 458 | Back alignment and structure |
|---|
Score = 256 bits (656), Expect = 2e-81
Identities = 62/416 (14%), Positives = 117/416 (28%), Gaps = 55/416 (13%)
Query: 13 GSLGSSSTM-ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQII 71
GS+ S+ +H + D N + + I +I
Sbjct: 3 GSMSDQSSQHFIHARQALLPD---GWAENVRIGIAGGVICSIETGV---------LAGPD 50
Query: 72 DLQSQILLPGFVNTHVHTSQQLAKGIADDV-----DLMTWLHDRIWPYESNMTEEDSYIS 126
D + +++ G N H H Q G+A+ +W ++ + MT E +
Sbjct: 51 DERQSVVVAGMANLHSHAFQYGMAGLAERRGPSADSFWSWRE-IMYKFALTMTPEQAEAV 109
Query: 127 TLLCGIELIHSGVTCFAE--------------AGGQHVSEMAKAVELLGLRACLVQSTMD 172
L ++++ +G T E + +A A G+ L+
Sbjct: 110 ALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTAGMGLTLLPVFYA 169
Query: 173 CGEGLPASWAVRTTDDCIQSQKELYAKHH-----HAADGRIRIWFGIRQIMNATDRLLLE 227
G + A I + + + T L
Sbjct: 170 HS-GFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAPHSLRAVTPDELDS 228
Query: 228 TRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT--VTFLDKIEFLQNNLLSAHTVWV 285
+ + +H+HVAE E + + G V +L + + H +
Sbjct: 229 VTQLLPD--APVHIHVAEQVKEVEDCIAW----SGKRPVEWLLDHQDVTARWCLIHATHM 282
Query: 286 NHTEIGLLSRAGVKVSHCPASAMRML--GFAPIKEMLHADICVSLGTDGAPSNNRMSIVD 343
+ E +++AG CP + L G E A +G+D I D
Sbjct: 283 SDEETKHMAKAGAIAGLCPVTEAN-LGDGTFNATEFAAAGGKFGIGSDSNVLIG---IGD 338
Query: 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
E+ + N + A + G ++ L+ G
Sbjct: 339 ELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR--PEDGLKKGAS 392
|
| >2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A Length = 421 | Back alignment and structure |
|---|
Score = 211 bits (538), Expect = 2e-64
Identities = 69/409 (16%), Positives = 131/409 (32%), Gaps = 63/409 (15%)
Query: 19 STMILHNAVIVTMDKES----------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMAD 68
T++++ ++TM+ V + V + + +I GQ AD
Sbjct: 6 DTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAGYE---AD 62
Query: 69 QIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYE----------SNM 118
+IID +++ PG V+ H H ++ ++ L + I
Sbjct: 63 EIIDCSGRLVTPGLVDPHTHLVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAA 122
Query: 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLP 178
+EE+ ++ G T G + + + +L + +D
Sbjct: 123 SEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELKQLRVAKKLHESQPVDLVSTFM 182
Query: 179 ASWAV-----RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAR 233
+ A+ DD + L + F + + + A
Sbjct: 183 GAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFTETGVFTVSQSRRYLQK--AA 240
Query: 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLL 293
E G+ +H EI + V+ H V + I L
Sbjct: 241 EAGFGLKIHADEIDPLGGAEL---AGKLKAVSA-------------DHLVGTSDEGIKKL 284
Query: 294 SRAGVKVSHCPASAM--RMLGFAPIKEMLHADICVSLGTDGAPSNNRM-SIVDEMYLASL 350
+ AG P + +A + M+ +CVSL TD P ++ +I M +A+L
Sbjct: 285 AEAGTIAVLLPGTTFYLGKSTYARARAMIDEGVCVSLATDFNPGSSPTENIQLIMSIAAL 344
Query: 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
K + AE + T+N A ++ + G L+AG+
Sbjct: 345 HLK--------------MTAEEIWHAVTVNAAYAIGKGEEAGQLKAGRS 379
|
| >2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A Length = 419 | Back alignment and structure |
|---|
Score = 185 bits (471), Expect = 1e-54
Identities = 71/416 (17%), Positives = 143/416 (34%), Gaps = 55/416 (13%)
Query: 6 SGGGSSSGSLGSSSTMILHNAVIVTMDKESR---VFRNGGVFVVQDRIKAIGQSADILQQ 62
G S+ G+ ++T + NA + T++ N + V RI G +D+
Sbjct: 2 PGNNSAKGTATGNATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDD 61
Query: 63 FSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYE------- 115
S AD+ D + + P ++ H H + + ++ L ++ I
Sbjct: 62 LST-ADETTDCGGRWITPALIDCHTHLVFGGNRAMEFEMRLNGATYEEIAKAGGGIVSSV 120
Query: 116 ---SNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVS-----EMAKAVELLG-LRACL 166
+++E L L+ GV+ G + +M + L LR
Sbjct: 121 RDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKMLRVARRLETLRPVR 180
Query: 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLL 226
+ ++ PA + R D A+G G + + + + +
Sbjct: 181 IVTSYLAAHATPADYKGRNADYITDVVLPGL--EKAHAEGLADAVDGFCEGIAFSVKEID 238
Query: 227 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN 286
A++ + +H ++ + G N L + H +++
Sbjct: 239 RVFAAAQQRGLPVKLHAEQLS------------NLGGAELAASY----NALSADHLEYLD 282
Query: 287 HTEIGLLSRAGVKVSHCPASAM--RMLGFAPIKEMLHADICVSLGTDGAPSNNRM-SIVD 343
T L++AG P + R P++ + A ++L TD P + + S++
Sbjct: 283 ETGAKALAKAGTVAVLLPGAFYALREKQLPPVQALRDAGAEIALATDCNPGTSPLTSLLL 342
Query: 344 EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
M + + + + + E L T N AK++ + G+LEAGK
Sbjct: 343 TMNMGATLFR--------------MTVEECLTATTRNAAKALGLLAETGTLEAGKS 384
|
| >2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A* Length = 416 | Back alignment and structure |
|---|
Score = 136 bits (345), Expect = 1e-36
Identities = 54/406 (13%), Positives = 121/406 (29%), Gaps = 61/406 (15%)
Query: 18 SSTMILHNAVIVTMDKESR---VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ 74
+ + N T+ + + + V + RI A+ D+ + D++
Sbjct: 4 NCERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGPY---PAHWQDMK 60
Query: 75 SQILLPGFVNTHVHTSQ---------QLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDS 123
+++ PG ++ H H KG+ A+ + +E+
Sbjct: 61 GKLVTPGLIDCHTHLIFAGSRAEEFELRQKGVPYAEIARKGGGII-STVRATRAASEDQL 119
Query: 124 YISTLLCGIELIHSGVTCFAEAGGQHVS-----EMAKAVELLGLRACLVQSTMDCGEG-L 177
+ L LI GVT G ++ +M + LG + T +
Sbjct: 120 FELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGEALPIRVKTTLLAAHAV 179
Query: 178 PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT 237
P + +E+ A F + + + + A ++
Sbjct: 180 PPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVFC--EHIGFSLAQTEQVYLAADQYGL 237
Query: 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSA-HTVWVNHTEIGLLSRA 296
+ H+ ++ + LS H +++ I L+
Sbjct: 238 AVKGHMDQLSNLGGSTL-----------------AANFGALSVDHLEYLDPEGIQALAHR 280
Query: 297 GVKVSHCPASAMRM--LGFAPIKEMLHADICVSLGTDGAPSNNRM-SIVDEMYLASLINK 353
GV + P + + P+ + A + +++ +D P + S+ M +A +
Sbjct: 281 GVVATLLPTAFYFLKETKLPPVVALRKAGVPMAVSSDINPGTAPIVSLRMAMNMACTLFG 340
Query: 354 GREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
L + T + A+++ +G L G
Sbjct: 341 --------------LTPVEAMAGVTRHAARALGEQEQLGQLRVGML 372
|
| >1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A Length = 430 | Back alignment and structure |
|---|
Score = 129 bits (325), Expect = 1e-33
Identities = 62/414 (14%), Positives = 133/414 (32%), Gaps = 65/414 (15%)
Query: 13 GSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIID 72
S+ +++ + NA + + ++ G +I AI + ++ + +D
Sbjct: 2 SSMANNALQTIINARLPGEEGLWQIHLQDG------KISAIDAQSGVMPI----TENSLD 51
Query: 73 LQSQILLPGFVNTHVHTSQQLAKGIAD---DVDLMTWLHDRIWPYESNMTEEDSYISTLL 129
+ +++P FV H+H G + L + +R ++ +T +D
Sbjct: 52 AEQGLVIPPFVEPHIHLDTTQTAGQPNWNQSGTLFEGI-ERWAERKALLTHDDVKQRAWQ 110
Query: 130 CGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTT 186
I +G+ HV A++ + V +D + +
Sbjct: 111 TLKWQIANGIQHVRT----HVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSY 166
Query: 187 DDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246
+ + L + + L +T +A+++ I +H EI
Sbjct: 167 PNG----EALLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEI 222
Query: 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE-------IGLLSRAGVK 299
E ++ TV L E + + ++HT ++ LL +G+
Sbjct: 223 DDEQSRFVE-------TVAALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGIN 275
Query: 300 VSHCPASAMRML----------GFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEM 345
P + + G +KEML + I V G DG +++ +
Sbjct: 276 FVANPLVNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVL 335
Query: 346 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
++ + + L + T + A+ L D G + AG
Sbjct: 336 HMGLHVCQLM----------GYGQINDGLNLITHHSAR-TLNLQDYG-IAAGNS 377
|
| >2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} Length = 403 | Back alignment and structure |
|---|
Score = 126 bits (317), Expect = 1e-32
Identities = 59/390 (15%), Positives = 111/390 (28%), Gaps = 43/390 (11%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ NA + D + +V DRI I + ID + ++ P
Sbjct: 7 LIIRNAYLSEKDSVYDIG------IVGDRIIKIEAKIE------GTVKDEIDAKGNLVSP 54
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIW------PYESNMTEEDSYISTLLCGIEL 134
GFV+ H H + + + R Y N T E+ +
Sbjct: 55 GFVDAHTHMDKSFTSTGERLPKFWSRPYTRDAAIEDGLKYYKNATHEEIKRHVIEHAHMQ 114
Query: 135 IHSGVTCFAEAGGQHVSEMAKAVE-LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ 193
+ G KAVE +L + L S +
Sbjct: 115 VLHGTLYTRTHVDVDSVAKTKAVEAVLEAKEELKDLIDIQVVAFAQSGFFVDLES----- 169
Query: 194 KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253
E + + N + L +A+E+ I H+ +I
Sbjct: 170 -ESLIRKSLDMGCDLVGGVDPATRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGTVGVYS 228
Query: 254 MDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGF 313
++ + ++ + I L +G+K C +S
Sbjct: 229 INRLAQKTIENGYKGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVTCFSSTP---PT 285
Query: 314 APIKEMLHADICVSLGTDGAPSNN----RMSIVDEMYLASLINKGREVFANGTTDPAALP 369
P+ ++L A I + +D +V + + +
Sbjct: 286 MPVIKLLEAGINLGCASDNIRDFWVPFGNGDMVQGALIETQRLE----------LKTNRD 335
Query: 370 AETVLRMATINGAKSVLWDNDIGSLEAGKK 399
+ +M T GA+ + + + G +E GKK
Sbjct: 336 LGLIWKMITSEGARVLGIEKNYG-IEVGKK 364
|
| >2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens} Length = 417 | Back alignment and structure |
|---|
Score = 99.0 bits (246), Expect = 4e-23
Identities = 62/389 (15%), Positives = 125/389 (32%), Gaps = 63/389 (16%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQSQ 76
+ ++L N V + + + + D +I A+G + Q ID +
Sbjct: 14 QAPILLTNVKPVGFG-KGASQSSTDILIGGDGKIAAVGSALQAPA-----DTQRIDAKGA 67
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
+ PG+V+ HVH IW ++++ S L+
Sbjct: 68 FISPGWVDLHVH----------------------IWHGGTDISIRPSECGAERGVTTLVD 105
Query: 137 SGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDC----IQS 192
+G A G + + E ++A L GL A V D +
Sbjct: 106 AGSAGEANFHGFREYIIEPSRE--RIKAFLNL----GSIGLVACNRVPELRDIKDIDLDR 159
Query: 193 QKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252
E YA++ G +++ + + + +A+ K + +HV E P
Sbjct: 160 ILECYAENSEHIVG-LKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGEPPALYDE 218
Query: 253 VMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLG 312
V++ + G V ++++ ++ + G+++ A
Sbjct: 219 VLE--ILGPGDVVTHCFNGKSGSSIMEDEDLFNLAER---CAGEGIRLDIGHGGASF--S 271
Query: 313 FAPIKEMLHADIC-VSLGTDGAPSNNRMSIVDEMYLAS-LINKGREVFANGTTDPAALPA 370
F + + + S+ TD + + D S L++ P
Sbjct: 272 FKVAEAAIARGLLPFSISTDLHGHSMNFPVWDLATTMSKLLSVDM-------------PF 318
Query: 371 ETVLRMATINGAKSVLWDNDIGSLEAGKK 399
E V+ T N A + D L+ G++
Sbjct: 319 ENVVEAVTRNPASVIRLD-MENRLDVGQR 346
|
| >2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} Length = 386 | Back alignment and structure |
|---|
Score = 91.9 bits (228), Expect = 1e-20
Identities = 55/386 (14%), Positives = 99/386 (25%), Gaps = 61/386 (15%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
S T+I + IV+ D +S V + + V I AIG + IID
Sbjct: 2 SKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMKDAG---DATIIDAAGST 58
Query: 78 LLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHS 137
+ PG ++THVH + +H
Sbjct: 59 VTPGLLDTHVH-------------------------VSGGDYAPRQKTMDFI--SSALHG 91
Query: 138 GVTCFAEAGGQHVSEMAKAVELLGLRA---CLVQSTMDCGEGLPASWAVRTTDDCIQSQK 194
GVT AG H + + G +A L +S + + +++
Sbjct: 92 GVTTMISAGSPH--FPGRPKDAAGTKALAITLSKSYYNARPAGVKVHGGAVILEKGLTEE 149
Query: 195 ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254
+ + G I N + A + + MH +
Sbjct: 150 DFIEMKKEGVWIVGEVGLGT--IKN--PEDAAPMVEWAHKHGFKVQMHTGGTSIPGSSTV 205
Query: 255 DTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR-MLGF 313
V + I T ++ + +
Sbjct: 206 TADDVIKTKPDVVSHIN-------GGPTAISVQEVDRIMDETDFAMEIVQCGNPKIADYV 258
Query: 314 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373
A V G D ++ L ++ + + E
Sbjct: 259 ARRAAEKGQLGRVIFGNDAPSGTG---LIPLGILRNMCQIASM---------SDIDPEVA 306
Query: 374 LRMATINGAKSVLWDNDIGSLEAGKK 399
+ MAT N ++ + G + GK+
Sbjct: 307 VCMATGNSTA--VYGLNTGVIAPGKE 330
|
| >3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima} Length = 396 | Back alignment and structure |
|---|
Score = 76.6 bits (188), Expect = 2e-15
Identities = 55/404 (13%), Positives = 111/404 (27%), Gaps = 67/404 (16%)
Query: 15 LGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ 74
+ S ++ NA + + G V V +++ +G++ + +I+DL
Sbjct: 1 MSLSVKILFKNATVFPITSRPF---KGDVLVSNGKVEKVGENIEDP------DAEIVDLT 51
Query: 75 SQILLPGFVNTHVH--TSQQLAKGIADDVDLMT-------WLHDRIWPYESNMTEEDSYI 125
+ L PGFV+ H H ++ D + T D P + + +
Sbjct: 52 GKFLFPGFVDAHSHIGLFEEGVGYYYSDGNEATDPVTPHVKALDGFNPQDPAIERALAGG 111
Query: 126 ST---LLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWA 182
T ++ G G + V E ++
Sbjct: 112 VTSVMIVPGSANPVGGQGSVIKFRSIIVEECI-------VKDPAGLKMAFGENPKRVYGE 164
Query: 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG--IH 240
+ T + + ++ ++ L+ +
Sbjct: 165 RKQTPSTRMGTAGVIRDYFTKVKNYMKKKELAQKEGKEFTETDLKMEVGEMVLRKKIPAR 224
Query: 241 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 300
MH + + NL+ H +L+ + V
Sbjct: 225 MHAHRADDILTAIRIAEEFGF--------------NLVIEHGTEAYKI-SKVLAEKKIPV 269
Query: 301 SHCPASAMRM------LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKG 354
P R L I ++L + ++L D +
Sbjct: 270 VVGPLLTFRTKLELKDLTMETIAKLLKDGVLIALMCDHPVIPLE-------FA------- 315
Query: 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398
T E +L++ T+N AK + ++ IGS+E GK
Sbjct: 316 --TVQAATAMRYGAKEEDLLKILTVNPAKILGLEDRIGSIEPGK 357
|
| >2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17 Length = 458 | Back alignment and structure |
|---|
Score = 69.4 bits (170), Expect = 4e-13
Identities = 77/411 (18%), Positives = 135/411 (32%), Gaps = 52/411 (12%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQSQ 76
L +A IVT DK + RN + V D RI+ + S + +D +
Sbjct: 11 VEPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPA---EYHYLDGTGK 67
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
I++PG +N H H Q K + + S + + + L+
Sbjct: 68 IVMPGLINAHTHLFSQ-GKPLNPKLATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLE 126
Query: 137 SGVTCFAEAGGQHVSEMA--KAVE---LLG--LRACLVQSTMDCGEGLP-ASWAVRTTDD 188
SGVT G + ++ +LG + A + G G P + T ++
Sbjct: 127 SGVTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEE 186
Query: 189 CIQSQKELYAKHHH----AADGRIRIWFGIRQIMNA--TDRLLLETRDMAREFKTGIHMH 242
+ + + AA G + I + + + + D A ++ + H
Sbjct: 187 ARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAH 246
Query: 243 VAEIPYENQVV---MDTRKVDHGTVTFLDK--IE-FLQNNLLSAHTVWVNHTEIGL--LS 294
+ + +DT ++HG + LD I F N + T L+
Sbjct: 247 AQSPEGVRRSLLAGVDT--IEHG--SVLDDELIGMFRHNPNALRGYSALIPTLSAGLPLT 302
Query: 295 RAGVKVSHCPASAMRML------GFAPIKEMLHADICVSLGTD-GAPSNNRMSIVDEMYL 347
G V+ + + ++ A + + +GTD G + + E+ L
Sbjct: 303 LLGQDVTGITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYATWRELEL 362
Query: 348 ASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398
V G L AT A + D + GSLE GK
Sbjct: 363 L--------VAYAG------FSPAEALHAATAVNASILGVDAETGSLEVGK 399
|
| >2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18 Length = 418 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 8e-11
Identities = 63/423 (14%), Positives = 133/423 (31%), Gaps = 83/423 (19%)
Query: 14 SLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIID 72
SL S ++H ++ D +S ++ V+ I I + + ID
Sbjct: 2 SLDVDSKTLIHAGKLI--DGKSDQVQSRISIVIDGNIISDIKKGFISSND----FEDYID 55
Query: 73 LQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGI 132
L+ +LPG ++ HVH + + E I
Sbjct: 56 LRDHTVLPGLMDMHVH---------------FGQEYQSKAQAPIKVEREMQAILATQHAY 100
Query: 133 ELIHSGVTCFAEAGGQHVSEMA--KAVE---LLG--LRAC--------------LVQSTM 171
SG T + G + ++ A+ L G + A ++
Sbjct: 101 VTFKSGFTTVRQVGDSGLVAISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVD 160
Query: 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHH----AADGRIRIWFGIRQIMNATDRLLLE 227
D +P V + + ++ Y G + Q T +
Sbjct: 161 DYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDA 220
Query: 228 TRDMAREFKTGIHMHVAEIPYENQVV---MDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW 284
A+++ + +H + + +D+ ++HG TF+D E + L+ + +
Sbjct: 221 VVSAAKDYGMWVAVHAHGAEGMKRAIKAGVDS--IEHG--TFMDL-EAMD--LMIENGTY 273
Query: 285 VN---HTEIGLLSRAGVKVSHCPASAMRMLGFAP-----IKEMLHADICVSLGTD-GAPS 335
+ ++ + + P ++ + ++ GTD G
Sbjct: 274 YVPTISAGEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGVQK 333
Query: 336 NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395
+ E ++ G +PA ++ AT+ AK + ++ +GS+E
Sbjct: 334 HGTNW--KEFVY--MVENG-------------MPAMKAIQSATMETAKLLRIEDKLGSIE 376
Query: 396 AGK 398
+GK
Sbjct: 377 SGK 379
|
| >3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X* Length = 534 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 1e-10
Identities = 17/67 (25%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG 81
L N I T + G+ + +R+ G S+ L+ +IIDL+ + ++P
Sbjct: 39 ALINGTIYTSFSPVKKVS--GLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPA 96
Query: 82 FVNTHVH 88
F ++H+H
Sbjct: 97 FFDSHLH 103
|
| >3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A Length = 608 | Back alignment and structure |
|---|
Score = 61.6 bits (149), Expect = 2e-10
Identities = 62/386 (16%), Positives = 116/386 (30%), Gaps = 82/386 (21%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ +V D + R + +V I ++ + A A Q+ID + P
Sbjct: 37 VLITGGTLV--DVVTGELRPADIGIVGALIASVHEPASRRD-----AAQVIDAGGAYVSP 89
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G ++TH+H ES+M +Y + ++ T
Sbjct: 90 GLIDTHMH-------------------------IESSMITPAAYAAAVVA-----RGVTT 119
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
+ V + + P V + + + A
Sbjct: 120 IVWDPHEFGNVHGVDGVRW--AAKAIENLPLRAILLAP--SCVPSAPGLERGGADFDAAI 175
Query: 201 HHAADGRIRIWFGIRQIMNAT-----DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255
I GI +IMN D + + + H + +
Sbjct: 176 LADLLSWPEIG-GIAEIMNMRGVIERDPRMSGIVQAGLAAEKLVCGHARGLKNADLNAFM 234
Query: 256 TRKV--DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGF 313
V DH V+ D + L+ L +H +
Sbjct: 235 AAGVSSDHELVSGEDLMAKLRAGLTIELRGSHDHLLPEFV-------------------- 274
Query: 314 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373
A + + H V+L TD ++ ++ L ++ R + G L E
Sbjct: 275 AALNTLGHLPQTVTLCTDDVFPDD---LLQGGGLDDVV---RRLVRYG------LKPEWA 322
Query: 374 LRMATINGAKSVLWDNDIGSLEAGKK 399
LR AT+N A+ L +D+G + AG++
Sbjct: 323 LRAATLNAAQ-RLGRSDLGLIAAGRR 347
|
| >2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3mkv_A* Length = 426 | Back alignment and structure |
|---|
Score = 59.3 bits (144), Expect = 8e-10
Identities = 67/425 (15%), Positives = 133/425 (31%), Gaps = 93/425 (21%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
S +T + N ++ D + + + + I+ + +ID++ +
Sbjct: 2 SLTTFLFRNGALLDPDHP-DLLQGFEILIEDGFIREVSDKPIKSS-----NAHVIDVKGK 55
Query: 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIH 136
++PG ++ HVH A + +L + + + ++
Sbjct: 56 TIMPGLIDLHVHVV-------AIEFNLPRVA---------TLPNVLVTLRAVPIMRAMLR 99
Query: 137 SGVTCFAEAGGQHVSEMAKAVE---LLG--LRACLVQSTMDCGEGLPASWAVRTTDDCIQ 191
G T +AGG +AVE + G L + G P + + D
Sbjct: 100 RGFTTVRDAGGAGYP-FKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPC 158
Query: 192 SQKELYAKHHHAADG--------RIRIWFGIRQI--------MNATDRL---------LL 226
ADG R + G QI + TD + +
Sbjct: 159 GCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIR 218
Query: 227 ETRDMAREFKTGIHMHVAEIPYENQVV---MDTRKVDHGTVTFLDK--IEFLQNN----- 276
A+ T + H + V + T ++HG +D + +
Sbjct: 219 AIVAEAQGRGTYVLAHAYTPAAIARAVRCGVRT--IEHG--NLIDDETARLVAEHGAYVV 274
Query: 277 --LLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTD-GA 333
L++ + + GL + K++ + + + + M A + + GTD
Sbjct: 275 PTLVTYDALASEGEKYGLPPESIAKIADVHGAGLHSI-----EIMKRAGVKMGFGTDLLG 329
Query: 334 PSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393
+ S DE + A + PAE V+ ATI A+ + + +G
Sbjct: 330 EAQRLQS--DEF----------RILAEVLS-----PAE-VIASATIVSAEVLGMQDKLGR 371
Query: 394 LEAGK 398
+ G
Sbjct: 372 IVPGA 376
|
| >2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis} Length = 396 | Back alignment and structure |
|---|
Score = 58.0 bits (141), Expect = 2e-09
Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77
+ ++++ + IVT E+ V +NG V + +I + + +I +
Sbjct: 2 AESLLIKDIAIVT---ENEVIKNGYVGINDGKISTVSTERPKEPY----SKEIQAPADSV 54
Query: 78 LLPGFVNTHVH 88
LLPG ++ H+H
Sbjct: 55 LLPGMIDIHIH 65
|
| >3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian} Length = 81 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 8e-09
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQSQILL 79
MIL+N I T+D + D I A+G + + IDL+ + +
Sbjct: 6 MILYNGKITTLDPS---QPEVSAIAITDGLITAVGGDELLNSATE--KTKKIDLKRKRAI 60
Query: 80 PGFVNTHVH 88
PG ++H+H
Sbjct: 61 PGLNDSHIH 69
|
| >3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A* Length = 408 | Back alignment and structure |
|---|
Score = 55.4 bits (134), Expect = 1e-08
Identities = 13/72 (18%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
+S ++ + + D ++ + + +I IG+ +I +
Sbjct: 4 TSEDFLIKSKGYL--DIQTGEIIKADLLIRNGKIAEIGKINTK-------DATVISIPDL 54
Query: 77 ILLPGFVNTHVH 88
IL+PG +++HVH
Sbjct: 55 ILIPGLMDSHVH 66
|
| >3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A* Length = 381 | Back alignment and structure |
|---|
Score = 53.7 bits (130), Expect = 3e-08
Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 9/72 (12%)
Query: 18 SSTM-ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
S+ M L N I T + V V + D+I+A+ + ++DL
Sbjct: 1 SNAMYALTNCKIYT---GNDVLVKHAVIINGDKIEAVCPIESLPS-----EMNVVDLNGA 52
Query: 77 ILLPGFVNTHVH 88
L PGF++ ++
Sbjct: 53 NLSPGFIDLQLN 64
|
| >2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 Length = 379 | Back alignment and structure |
|---|
Score = 51.7 bits (123), Expect = 2e-07
Identities = 52/382 (13%), Positives = 104/382 (27%), Gaps = 65/382 (17%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N V + + + +I A+ + + I +
Sbjct: 7 LLIKNGQTVNG-------MPVEIAIKEKKIAAVAATIS-----GSAKETIHLEPGTYVSA 54
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G+++ HVH + Y + + GVT
Sbjct: 55 GWIDDHVH---------------CFEKMALYYDYPDEIG---------------VKKGVT 84
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE-GLPASWAVRTTDDCIQSQKELYAK 199
+AG + + +L V ++ + G+ A + S + +
Sbjct: 85 TVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVAQDELADLSKVQASLVKKAIQ 144
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT-GIHMHVAEIPYENQVVMDT-R 257
I+ I + L + + +E + + +H+ P ++
Sbjct: 145 ELPDFVVGIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALME 204
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIK 317
K D T F K +N +L T + GV + F +
Sbjct: 205 KGDVLTHCFNGK----ENGILDQATDKI-KDFAWQAYNKGVVFDIGHGTDSF--NFHVAE 257
Query: 318 EMLHAD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376
L S+ TD N V L ++ G ++
Sbjct: 258 TALREGMKAASISTDIYIRNRENGPV-----YDLATTMEKLRVVGY------DWPEIIEK 306
Query: 377 ATINGAKSVLWDNDIGSLEAGK 398
T A++ G+LE GK
Sbjct: 307 VTKAPAENFHLT-QKGTLEIGK 327
|
| >1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A* Length = 382 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 3e-07
Identities = 13/66 (19%), Positives = 24/66 (36%), Gaps = 8/66 (12%)
Query: 23 LHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGF 82
L I T + V + IK++ A++ + L IL PGF
Sbjct: 4 LTQGRIFT---GHEFLDDHAVVIADGLIKSVCPVAEL-----PPEIEQRSLNGAILSPGF 55
Query: 83 VNTHVH 88
++ ++
Sbjct: 56 IDVQLN 61
|
| >2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis} Length = 452 | Back alignment and structure |
|---|
Score = 51.0 bits (123), Expect = 3e-07
Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
++L NA+I E + F G V + I I + ++ + AD++I+ L
Sbjct: 5 KILLRNALITN---EGKTFP-GSVMIDGAFISRIIEG-ELPADDNLSADEVIECSGLRLF 59
Query: 80 PGFVNTHVH 88
PG ++ VH
Sbjct: 60 PGCIDDQVH 68
|
| >3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A* Length = 423 | Back alignment and structure |
|---|
Score = 50.8 bits (122), Expect = 3e-07
Identities = 15/72 (20%), Positives = 34/72 (47%), Gaps = 6/72 (8%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
S + +L ++ +++ + + V + +RI + L Q ID++ +
Sbjct: 2 SLTITVLQGGNVLDLERG-VLLEHHHVVIDGERIVEVTDRPVDLP-----NAQAIDVRGK 55
Query: 77 ILLPGFVNTHVH 88
++PGF++ HVH
Sbjct: 56 TVMPGFIDCHVH 67
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 4e-07
Identities = 43/291 (14%), Positives = 83/291 (28%), Gaps = 91/291 (31%)
Query: 55 QSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPY 114
Q+A F +L +ILL T++ K + D + T H + +
Sbjct: 254 QNAKAWNAF--------NLSCKILL---------TTRF--KQVTDFLSAATTTHISLDHH 294
Query: 115 ESNMTEEDSY--------------------ISTLLCGI--ELIHSGVTC---FAEAGGQH 149
+T ++ + I E I G+ +
Sbjct: 295 SMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDK 354
Query: 150 VSE-MAKAVELLG---LRACLVQ-STMDCGEGLPAS-----WAVRTTDDCIQSQKELYAK 199
++ + ++ +L R + S +P W D + +L+
Sbjct: 355 LTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKY 414
Query: 200 ---HHHAADGRIRIWFGI-----RQIMNATD--RLLLETRDMAREFKT------------ 237
+ I I I ++ N R +++ ++ + F +
Sbjct: 415 SLVEKQPKESTISI-PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF 473
Query: 238 ----GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW 284
G H+ E E + R V FLD FL+ + T W
Sbjct: 474 YSHIGHHLKNIE-HPERMTLF--RMV------FLD-FRFLEQKIRHDSTAW 514
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 4e-07
Identities = 54/427 (12%), Positives = 105/427 (24%), Gaps = 158/427 (37%)
Query: 46 VQDRIKAIGQSADILQQFSQMADQII-----DLQSQILLPGFVNTHVHTSQQLAKGI-AD 99
VQD K+I +I D II + L ++ Q+ + +
Sbjct: 38 VQDMPKSILSKEEI--------DHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRI 89
Query: 100 DVDLMTWLHDRIWPYESNMTE--EDSYISTL--LCG------------IELI-------- 135
+ +L E YI L ++
Sbjct: 90 NYK---FLMSP-IKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL 145
Query: 136 ----HSGVTCFAEAG-GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWA----VRTT 186
V G G+ +A V + VQ MD W +
Sbjct: 146 ELRPAKNVLIDGVLGSGKTW--VALDV----CLSYKVQCKMDFK----IFWLNLKNCNSP 195
Query: 187 DDCIQSQKELYAK-----------------HHHAADGRIRIWFGIRQ------------- 216
+ ++ ++L + H+ +R +
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQN 255
Query: 217 --IMNATD---RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE 271
NA + ++LL TR V D T LD
Sbjct: 256 AKAWNAFNLSCKILLTTRFKQ--------------------VTDFLSAATTTHISLDHHS 295
Query: 272 --FLQNNLLSAHTVWVNHTE-----------------IGLLSRAGV------------KV 300
+ + S +++ I R G+ K+
Sbjct: 296 MTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL 355
Query: 301 SHCPASAMRMLGFAPIKEMLHA------DICVSLGT-----DGAPSNNRMSIVDEMYLAS 349
+ S++ +L A ++M + ++ M +V++++ S
Sbjct: 356 TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYS 415
Query: 350 LINKGRE 356
L+ K +
Sbjct: 416 LVEKQPK 422
|
| >3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans} Length = 448 | Back alignment and structure |
|---|
Score = 49.1 bits (118), Expect = 1e-06
Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ ++ +VT E+ +R V + + AI + I ID L P
Sbjct: 8 LIIRSSTVVT---ETTTYR-ADVAIRNGIVSAITEPGSISSD----DGPAIDGTGLHLFP 59
Query: 81 GFVNTHVH 88
G V+ HVH
Sbjct: 60 GMVDVHVH 67
|
| >1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10 Length = 376 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 17/79 (21%)
Query: 10 SSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQ 69
S MI+ +IV G V + + +I + ++
Sbjct: 2 GSDKIHHHHHHMIVEKVLIVD---PIDGEFTGDVEIEEGKIVKV--------------EK 44
Query: 70 IIDLQSQILLPGFVNTHVH 88
+ +L+PGFV+ H+H
Sbjct: 45 RECIPRGVLMPGFVDPHIH 63
|
| >1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A* Length = 467 | Back alignment and structure |
|---|
Score = 48.3 bits (116), Expect = 2e-06
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
+I+ N ++ D + + V +IK I ++ +IID + I+
Sbjct: 47 LKLIVKNGYVI--DPSQNLEGEFDILVENGKIKKIDKNIL------VPEAEIIDAKGLIV 98
Query: 79 LPGFVNTHVH 88
PGF++ HVH
Sbjct: 99 CPGFIDIHVH 108
|
| >1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6 Length = 458 | Back alignment and structure |
|---|
Score = 46.4 bits (111), Expect = 1e-05
Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 9/68 (13%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ N +V+ + + V ++ AI ++ A + ID + ++P
Sbjct: 4 VIVKNCRLVS---SDGITE-ADILVKDGKVAAISADTSDVE-----ASRTIDAGGKFVMP 54
Query: 81 GFVNTHVH 88
G V+ HVH
Sbjct: 55 GVVDEHVH 62
|
| >3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis} Length = 428 | Back alignment and structure |
|---|
Score = 46.3 bits (111), Expect = 1e-05
Identities = 12/69 (17%), Positives = 26/69 (37%), Gaps = 9/69 (13%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
+ N + E + V +I + ++ ++ID+ +++
Sbjct: 2 NYLFKNGRYMN---EEGKIVATDLLVQDGKIAKVAENIT------ADNAEVIDVNGKLIA 52
Query: 80 PGFVNTHVH 88
PG V+ HVH
Sbjct: 53 PGLVDVHVH 61
|
| >3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli} Length = 473 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 11/68 (16%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ N ++ ++ R + V +I AIGQ A +++D ++ P
Sbjct: 25 LIIKNGTVILENEA----RVVDIAVKGGKIAAIGQDLG-------DAKEVMDASGLVVSP 73
Query: 81 GFVNTHVH 88
G V+ H H
Sbjct: 74 GMVDAHTH 81
|
| >1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A* Length = 458 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 15/68 (22%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+++ N I+T ++ ++ + I IGQ+ + ++ID + + P
Sbjct: 2 LLIKNGEIIT---ADSRYK-ADIYAEGETITRIGQNLEAPP-----GTEVIDATGKYVFP 52
Query: 81 GFVNTHVH 88
GF++ HVH
Sbjct: 53 GFIDPHVH 60
|
| >3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp} Length = 424 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 10/69 (14%)
Query: 21 MIL-HNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
M L N ++ + + + + IK I + + IID + +
Sbjct: 1 MKLIKNGKVLQNGEL----QQADILIDGKVIKQIAPAIEPSN-----GVDIIDAKGHFVS 51
Query: 80 PGFVNTHVH 88
PGFV+ HVH
Sbjct: 52 PGFVDVHVH 60
|
| >3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti} Length = 490 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 15/68 (22%), Positives = 24/68 (35%), Gaps = 12/68 (17%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
++ IVT D V V RI IG + + +D ++P
Sbjct: 3 TVIKGGTIVTADLT----YKADVKVEGGRIVEIGPNLS--------GAETLDATGCYVMP 50
Query: 81 GFVNTHVH 88
G ++ H H
Sbjct: 51 GGIDPHTH 58
|
| >2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A* Length = 559 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 9/68 (13%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ N +I T S ++ + V +++ I S D ++ID + + P
Sbjct: 5 LIIKNGIICT---ASDIYA-AEIAVNNGKVQLIAASIDPSL-----GSEVIDAEGAFITP 55
Query: 81 GFVNTHVH 88
G ++ HVH
Sbjct: 56 GGIDAHVH 63
|
| >1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A* Length = 390 | Back alignment and structure |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 17/73 (23%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 17 SSSTMIL-HNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS 75
+++ L A + + V V +I A+ + ++DL
Sbjct: 5 TAAGFTLLQGAHLYAPED----RGICDVLVANGKIIAVA---SNIPSDIVPNCTVVDLSG 57
Query: 76 QILLPGFVNTHVH 88
QIL PGF++ HVH
Sbjct: 58 QILCPGFIDQHVH 70
|
| >2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6 Length = 521 | Back alignment and structure |
|---|
Score = 45.0 bits (107), Expect = 3e-05
Identities = 18/72 (25%), Positives = 36/72 (50%), Gaps = 9/72 (12%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
+ T+++ N +V + R F+ V V IK I ++ + + +++D +
Sbjct: 6 QTGTILIKNGTVVN---DDRYFK-SDVLVENGIIKEISKNIEPKE-----GIKVVDATDK 56
Query: 77 ILLPGFVNTHVH 88
+LLPG ++TH H
Sbjct: 57 LLLPGGIDTHTH 68
|
| >3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A* Length = 461 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 4e-05
Identities = 16/69 (23%), Positives = 28/69 (40%), Gaps = 10/69 (14%)
Query: 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
+ N +VT S ++ V + +++ AIG ++ID LL
Sbjct: 2 KKWIRNGTVVT---ASDTYQ-ADVLIDGEKVVAIGSDLQA------TDAEVIDATGYYLL 51
Query: 80 PGFVNTHVH 88
PG ++ H H
Sbjct: 52 PGGIDPHTH 60
|
| >1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A Length = 496 | Back alignment and structure |
|---|
Score = 44.2 bits (104), Expect = 6e-05
Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 12/86 (13%)
Query: 12 SGSLGSSSTM----ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMA 67
GS+ IL ++ D + R V V DRI A+G + A
Sbjct: 10 HGSMSQPDATPFDYILSGGTVI--DGTNAPGRLADVGVRGDRIAAVGDLSA------SSA 61
Query: 68 DQIIDLQSQILLPGFVNTHVHTSQQL 93
+ ID+ +++ PGF+++H H L
Sbjct: 62 RRRIDVAGKVVSPGFIDSHTHDDNYL 87
|
| >1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6 Length = 457 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 16/68 (23%), Positives = 28/68 (41%), Gaps = 11/68 (16%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+I+ N IVT D + + +I IG + A++ ID + + P
Sbjct: 3 IIIKNGTIVTADGI----SRADLGIKDGKITQIGGALG-------PAERTIDAAGRYVFP 51
Query: 81 GFVNTHVH 88
G ++ H H
Sbjct: 52 GGIDVHTH 59
|
| >2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens} Length = 541 | Back alignment and structure |
|---|
Score = 43.5 bits (103), Expect = 8e-05
Identities = 14/72 (19%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
+ S +++ +V D V V ++A+G +++D +
Sbjct: 25 APSRLLIRGGRVVNDDFS----EVADVLVEDGVVRALGHDLLPPGGAPA-GLRVLDAAGK 79
Query: 77 ILLPGFVNTHVH 88
++LPG ++TH H
Sbjct: 80 LVLPGGIDTHTH 91
|
| >2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus} Length = 426 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 18/69 (26%), Positives = 27/69 (39%), Gaps = 13/69 (18%)
Query: 21 MIL-HNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79
MIL N +V D V + + RI ++ A Q++D L
Sbjct: 1 MILIRNVRLV--DARGE-RGPADVLIGEGRILSLEGGE---------AKQVVDGTGCFLA 48
Query: 80 PGFVNTHVH 88
PGF++ H H
Sbjct: 49 PGFLDLHAH 57
|
| >2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A Length = 501 | Back alignment and structure |
|---|
Score = 41.9 bits (99), Expect = 3e-04
Identities = 13/72 (18%), Positives = 32/72 (44%), Gaps = 9/72 (12%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
+S +++ IV D+ +++ IK IG++ + + I+ S+
Sbjct: 24 TSDRLLIKGGKIVNDDQS----FYADIYMEDGLIKQIGENLIVPG-----GVKTIEAHSR 74
Query: 77 ILLPGFVNTHVH 88
+++PG ++ H
Sbjct: 75 MVIPGGIDVHTR 86
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 400 | |||
| 4aql_A | 476 | Guanine deaminase; hydrolase, purine metabolism; H | 100.0 | |
| 4dzh_A | 472 | Amidohydrolase; adenosine deaminase, nysgrc, struc | 100.0 | |
| 3lnp_A | 468 | Amidohydrolase family protein OLEI01672_1_465; TIM | 100.0 | |
| 4dyk_A | 451 | Amidohydrolase; adenosine deaminase, nysgrc, struc | 100.0 | |
| 4f0r_A | 447 | 5-methylthioadenosine/S-adenosylhomocysteine DEAM; | 100.0 | |
| 3h4u_A | 479 | Amidohydrolase; signature of Zn ligands, structura | 100.0 | |
| 3ls9_A | 456 | Triazine hydrolase; atrazine chlorohydrolase TRZN; | 100.0 | |
| 2paj_A | 492 | Putative cytosine/guanine deaminase; NYSGXRC, PSI- | 100.0 | |
| 2ood_A | 475 | BLR3880 protein; PSI-II, PSI-2, guanine deaminase, | 100.0 | |
| 2i9u_A | 439 | Cytosine/guanine deaminase related protein; protei | 100.0 | |
| 3v7p_A | 427 | Amidohydrolase family protein; iron binding site, | 100.0 | |
| 4f0l_A | 458 | Amidohydrolase; ssgcid, structural genomics, seatt | 100.0 | |
| 3mdu_A | 453 | N-formimino-L-glutamate iminohydrolase; amonohydra | 100.0 | |
| 2imr_A | 420 | Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, | 100.0 | |
| 1p1m_A | 406 | Hypothetical protein TM0936; putative metal depend | 100.0 | |
| 3hpa_A | 479 | Amidohydrolase; signature of Zn ligands, structura | 100.0 | |
| 1ra0_A | 430 | Cytosine deaminase; alpha-beta barrel, hexamer, co | 100.0 | |
| 3gnh_A | 403 | L-lysine, L-arginine carboxypeptidase CC2672; N-me | 100.0 | |
| 2bb0_A | 421 | Imidazolonepropionase; TIM barrel, hydrolase; 2.00 | 100.0 | |
| 3feq_A | 423 | Putative amidohydrolase; unknown source, sargasso | 100.0 | |
| 2puz_A | 419 | Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino | 100.0 | |
| 2r8c_A | 426 | Putative amidohydrolase; unknown source, sargasso | 100.0 | |
| 2q09_A | 416 | Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio | 100.0 | |
| 2qt3_A | 403 | N-isopropylammelide isopropyl amidohydrolase; N-is | 100.0 | |
| 2qs8_A | 418 | XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p | 100.0 | |
| 3be7_A | 408 | Zn-dependent arginine carboxypeptidase; unknown so | 100.0 | |
| 2p9b_A | 458 | Possible prolidase; protein structure initiative I | 100.0 | |
| 3icj_A | 534 | Uncharacterized metal-dependent hydrolase; structu | 100.0 | |
| 3ooq_A | 396 | Amidohydrolase; structural genomics, protein struc | 100.0 | |
| 1yrr_A | 382 | N-acetylglucosamine-6-phosphate deacetylase; (beta | 100.0 | |
| 2fty_A | 559 | Dihydropyrimidinase; alpha/beta barrel, beta-sandw | 99.97 | |
| 2vun_A | 386 | Enamidase; nicotinate degradation, binuclear metal | 99.97 | |
| 1e9y_B | 569 | Urease subunit beta; hydrolase, dodecamer; HET: KC | 99.97 | |
| 1gkp_A | 458 | Hydantoinase; hydrolase, dihydropyrimidinase, cycl | 99.97 | |
| 1gkr_A | 458 | Hydantoinase, non-ATP dependent L-selective hydant | 99.97 | |
| 2ics_A | 379 | Adenine deaminase; TIM barrel, binuclear zinc, ade | 99.97 | |
| 2ogj_A | 417 | Dihydroorotase; TIM barrel, binuclear zinc, imidaz | 99.97 | |
| 3sfw_A | 461 | Dihydropyrimidinase; hydrolase, zinc binding; HET: | 99.97 | |
| 1xrt_A | 467 | Dihydroorotase, dhoase; amidohydrolase, metalloenz | 99.97 | |
| 2vm8_A | 501 | Dihydropyrimidinase-related protein 2; neurogenesi | 99.97 | |
| 4ac7_C | 570 | Urease subunit alpha; hydrolase, bacillus pasteuri | 99.97 | |
| 4ubp_C | 570 | Protein (urease (chain C)); bacillus pasteurii, ni | 99.97 | |
| 2vhl_A | 396 | N-acetylglucosamine-6-phosphate deacetylase; N- ac | 99.96 | |
| 1nfg_A | 457 | D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2 | 99.96 | |
| 2gwn_A | 452 | Dihydroorotase; zinc-binding prote structural geno | 99.96 | |
| 2z00_A | 426 | Dihydroorotase; zinc binding protein, hydrolase, m | 99.96 | |
| 3dc8_A | 490 | Dihydropyrimidinase; TIM-barrel, hydrolase; HET: K | 99.96 | |
| 3hm7_A | 448 | Allantoinase; metallo-dependent hydrolase, protein | 99.96 | |
| 3e74_A | 473 | Allantoinase; (beta/alpha)8-barrel domain, small b | 99.96 | |
| 3mtw_A | 403 | L-arginine carboxypeptidase CC2672; hydrolase; HET | 99.96 | |
| 3mpg_A | 428 | Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus | 99.95 | |
| 2vr2_A | 541 | Dihydropyrimidinase; hydantoinase, metal-binding, | 99.95 | |
| 3gri_A | 424 | Dihydroorotase, dhoase; hydrolase, IDP00795, metal | 99.95 | |
| 2ftw_A | 521 | Dihydropyrimidine amidohydrolase; (beta-alpha)8-ba | 99.95 | |
| 3nqb_A | 608 | Adenine deaminase 2; PSI-II, structural genomics, | 99.95 | |
| 1rk6_A | 496 | D-aminoacylase; TIM barrel, beta barrel, insertion | 99.95 | |
| 1onw_A | 390 | Isoaspartyl dipeptidase; amidohydrolase, hydrolase | 99.95 | |
| 3iv8_A | 381 | N-acetylglucosamine-6-phosphate deacetylase; IDP01 | 99.94 | |
| 4gy7_A | 840 | Urease; JACK bean, hydrolase, ME binding, nickel; | 99.94 | |
| 3mkv_A | 426 | Putative amidohydrolase; sargasso SEA, structural | 99.94 | |
| 3gip_A | 480 | N-acyl-D-glutamate deacylase; amidohydrolase famil | 99.93 | |
| 1o12_A | 376 | N-acetylglucosamine-6-phosphate deacetylase; struc | 99.93 | |
| 4ep8_C | 566 | Urease subunit alpha; alpha-beta barrel, nickel me | 99.91 | |
| 2pgf_A | 371 | Adenosine deaminase; metallo-dependent hydrolase, | 99.79 | |
| 3pao_A | 326 | Adenosine deaminase; structural genomics, PSI-2, p | 99.73 | |
| 3rys_A | 343 | Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2 | 99.72 | |
| 3ggm_A | 81 | Uncharacterized protein BT9727_2919; bacillus cere | 99.67 | |
| 3iar_A | 367 | Adenosine deaminase; purine metabolism structural | 99.6 | |
| 3pnu_A | 359 | Dihydroorotase; TIM barrel, zinc binding, hydrolas | 99.51 | |
| 2z26_A | 347 | Dihydroorotase, dhoase; TIM barrel, hydrolase; HET | 99.46 | |
| 2ob3_A | 330 | Parathion hydrolase; metalloenzyme, TIM barrel, ne | 99.33 | |
| 2vc7_A | 314 | Aryldialkylphosphatase; phosphotriesterase, promis | 99.31 | |
| 1bf6_A | 291 | Phosphotriesterase homology protein; hypothetical | 99.23 | |
| 4gxw_A | 380 | Adenosine deaminase; amidohydrolase, COG1816, EFI, | 99.2 | |
| 3ovg_A | 363 | Amidohydrolase; structural genomics, PSI-2, protei | 99.14 | |
| 2a3l_A | 701 | AMP deaminase, AMPD; atampd, AT2G38280, adenosine | 99.12 | |
| 2y1h_A | 272 | Putative deoxyribonuclease tatdn3; hydrolase; 2.50 | 99.07 | |
| 1zzm_A | 259 | Putative deoxyribonuclease YJJV; hydrolaze, zinc, | 99.06 | |
| 3k2g_A | 364 | Resiniferatoxin-binding, phosphotriesterase- relat | 99.04 | |
| 3tn4_A | 360 | Phosphotriesterase; lactonase, hydrolase; HET: KCX | 99.02 | |
| 3gtx_A | 339 | Organophosphorus hydrolase; mutant, amidohydrolase | 98.99 | |
| 3pnz_A | 330 | Phosphotriesterase family protein; amidohydrolase | 98.97 | |
| 3rcm_A | 287 | TATD family hydrolase; HET: CIT; 2.05A {Pseudomona | 98.97 | |
| 1xwy_A | 264 | DNAse TATD, deoxyribonuclease TATD; TIM barrael, z | 98.96 | |
| 1yix_A | 265 | Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW | 98.94 | |
| 3rhg_A | 365 | Putative phophotriesterase; hydrolase, amidohydrol | 98.92 | |
| 3lgd_A | 508 | Adenosine deaminase CECR1; TIM barrel, dimerizatio | 98.79 | |
| 2xio_A | 301 | Putative deoxyribonuclease tatdn1; hydrolase; 1.19 | 98.56 | |
| 4i6k_A | 294 | Amidohydrolase family protein; enzyme function ini | 98.54 | |
| 2gzx_A | 265 | Putative TATD related DNAse; deoxyribonuclease, NE | 98.48 | |
| 1j6o_A | 268 | TATD-related deoxyribonuclease; structural genomic | 98.45 | |
| 3gg7_A | 254 | Uncharacterized metalloprotein; structural genomic | 98.44 | |
| 3ipw_A | 325 | Hydrolase TATD family protein; niaid, ssgcid, seat | 98.44 | |
| 2ffi_A | 288 | 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; | 98.43 | |
| 3guw_A | 261 | Uncharacterized protein AF_1765; alpha-beta protei | 98.21 | |
| 4d9a_A | 303 | 2-pyrone-4,6-dicarbaxylate hydrolase; structural g | 97.9 | |
| 2dvt_A | 327 | Thermophilic reversible gamma-resorcylate decarbo; | 97.88 | |
| 3irs_A | 291 | Uncharacterized protein BB4693; structural genomic | 97.87 | |
| 3cjp_A | 272 | Predicted amidohydrolase, dihydroorotase family; s | 97.73 | |
| 4do7_A | 303 | Amidohydrolase 2; enzyme function initiative, EFI, | 97.72 | |
| 2f6k_A | 307 | Metal-dependent hydrolase; metal dependent hydroly | 97.51 | |
| 3e2v_A | 401 | 3'-5'-exonuclease; structural genomics, hydrolase, | 97.47 | |
| 3qy7_A | 262 | Tyrosine-protein phosphatase YWQE; TIM barrel, pol | 96.15 | |
| 2wje_A | 247 | CPS4B, tyrosine-protein phosphatase CPSB; capsule | 96.14 | |
| 2wm1_A | 336 | 2-amino-3-carboxymuconate-6-semialdehyde decarboxy | 96.11 | |
| 1v77_A | 212 | PH1877P, hypothetical protein PH1877; RNAse P prot | 93.36 | |
| 3nur_A | 357 | Amidohydrolase; TIM barrel; 1.75A {Staphylococcus | 93.36 | |
| 2hbv_A | 334 | 2-amino-3-carboxymuconate 6-semialdehyde decarbox; | 93.23 | |
| 2i5g_A | 325 | Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, stru | 91.49 | |
| 2qpx_A | 376 | Predicted metal-dependent hydrolase of the TIM-BA; | 91.03 | |
| 3ij6_A | 312 | Uncharacterized metal-dependent hydrolase; structu | 89.45 | |
| 4inf_A | 373 | Metal-dependent hydrolase; amidohydrolase, metal b | 87.54 | |
| 1itu_A | 369 | Renal dipeptidase; glycoprotein, membrane-bound, z | 86.88 | |
| 2gwg_A | 350 | 4-oxalomesaconate hydratase; TIM-barrel like prote | 85.69 |
| >4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-50 Score=381.69 Aligned_cols=378 Identities=22% Similarity=0.346 Sum_probs=315.9
Q ss_pred CcccEEEEecEEEeec-CCCceeeceeEEEeC-CEEEEecCChhhh---hhhccCCCcEEeC-CCcEeeecccccCcCCc
Q 015784 17 SSSTMILHNAVIVTMD-KESRVFRNGGVFVVQ-DRIKAIGQSADIL---QQFSQMADQIIDL-QSQILLPGFVNTHVHTS 90 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~-~~~~~~~~~~i~v~~-g~I~~vg~~~~~~---~~~~~~~~~viD~-~g~~v~PG~iD~H~H~~ 90 (400)
.+.+++|+|..|++.. +...++++++|+|+| |+|++|++..+++ ...+..+.++||+ +|++|||||||+|+|+.
T Consensus 29 ~~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~~ 108 (476)
T 4aql_A 29 PPLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHAS 108 (476)
T ss_dssp --CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEGG
T ss_pred CCccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccchH
Confidence 4567899999998753 345678999999998 9999999875442 1122235689995 58999999999999999
Q ss_pred ccccccccCCCChhHhhhhccccccCCCChhhHHHHHHH-HHHHHHhcCcceeeccCcCCHHH---HHHHHHHcCCeEEE
Q 015784 91 QQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLL-CGIELIHSGVTCFAEAGGQHVSE---MAKAVELLGLRACL 166 (400)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~GvTt~~~~~~~~~~~---~~~~~~~~g~~~~~ 166 (400)
++.+++...+.++.+|+..++|+.+..+++++.+..... .+.+++++|+|++.+++..+.+. ..+.+.+.|+|..+
T Consensus 109 ~~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~~~~~~~~~~~~~a~~~~G~r~~~ 188 (476)
T 4aql_A 109 QYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLADITDKFGQRAFV 188 (476)
T ss_dssp GGGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEecccCchHHHHHHHHHHHhCCEEEE
Confidence 999999999999999999999999888887775544444 34679999999999886555554 67888999999999
Q ss_pred ecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCC
Q 015784 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~ 246 (400)
+..+++.....+. ........++...++++++.....+.++..++++..+..+++.++++++.|+++|+++++|+.++
T Consensus 189 ~~~~~d~~~~~p~--~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~ 266 (476)
T 4aql_A 189 GKVCMDLNDTFPE--YKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISEN 266 (476)
T ss_dssp ECEECSCCSSCTT--SCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred eeccccCCCCCcc--cccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCCcCCcCCHHHHHHHHHHHHHcCCceEEEecCC
Confidence 9888876542222 23455677778888888887666678998899999999999999999999999999999999999
Q ss_pred chhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCc
Q 015784 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 325 (400)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~ 325 (400)
..+.+.+.+.++....+++.+...++++.+.++.|+.++++++++++++.|+.+++||.+|+++ .+..|+++++++|++
T Consensus 267 ~~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~g~~v~~~P~sn~~l~~g~~p~~~~~~~Gv~ 346 (476)
T 4aql_A 267 RDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGFLNVLEVLKHEVK 346 (476)
T ss_dssp HHHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHTTCE
T ss_pred HHHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHcCCEEEECchhhhhhCcchHHHHHHHHCCCc
Confidence 9888888888876556999999999999999999999999999999999999999999999988 889999999999999
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 326 v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++|||+.+. ...+++.+++.+....+..... ...+.+++++++|+++|.|||++||+++++|+|++||.|
T Consensus 347 v~lGtD~~~~-~~~~~~~~~~~a~~~~~~~~~~---~~~~~~l~~~~al~~aT~~~A~~lgl~~~~G~l~~G~~A 417 (476)
T 4aql_A 347 IGLGTDVAGG-YSYSMLDAIRRAVMVSNILLIN---KVNEKSLTLKEVFRLATLGGSQALGLDGEIGNFEVGKEF 417 (476)
T ss_dssp EEECCCTTTS-SCCCHHHHHHHHHHHHHHHHHT---TSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBC
T ss_pred EEEeCCCCCC-CCCCHHHHHHHHHHHHhhhhcc---cCCCCcCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCCC
Confidence 9999998654 5688999999887665432110 113457999999999999999999999989999999987
|
| >4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-50 Score=380.62 Aligned_cols=366 Identities=28% Similarity=0.471 Sum_probs=311.8
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
++++++|+|++|+++++...++++++|+|+||+|++|++..+.+..++ +.++||++|++|+|||||+|+|+.++..++
T Consensus 12 ~~~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~--~~~viD~~g~~v~PGlID~H~Hl~~~~~~g 89 (472)
T 4dzh_A 12 EPCDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFA--PARTVSRPDAALMPGLVNAHTHNPMTLLRG 89 (472)
T ss_dssp EEEEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEE--EEEEEEEEEEEEEECEEEEEECGGGGGGTT
T ss_pred CcCcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCC--CCeEEeCCCcEEEECccccccChhhHHhcc
Confidence 346899999999998766678899999999999999998766543222 468999999999999999999999999999
Q ss_pred ccCCCChhHhhhhccccccC-CCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCC
Q 015784 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (400)
...+.++.+|+...+|+... .+++++.+..+...+.+++++|+|++.+++ ...+...+.+.+.|++.......+..
T Consensus 90 ~~~~~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~a~~~~g~r~~~~~~~~~~-- 166 (472)
T 4dzh_A 90 VADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENY-FFADVQAAVYKQHGFRALVGAVIIDF-- 166 (472)
T ss_dssp SSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-SCHHHHHHHHHHTTCEEEEEEEECSS--
T ss_pred ccCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHhCCeEEEEecccCC--
Confidence 88889999999998887654 478888888888889999999999999987 66778888899999998877666542
Q ss_pred CCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh
Q 015784 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (400)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (400)
+..+ .......+....++++.+.. .+.+++...++..+..+++.+..+++.|+++|+++++|+.++..+.....+
T Consensus 167 --~~~~-~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~ 241 (472)
T 4dzh_A 167 --PTAW-ASSDDEYFARAGELHDQWRD--DPLISTAFAPHAPYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVA 241 (472)
T ss_dssp --CCSS-CSSHHHHHHHHHHHHHHHTT--CSSEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred --Cccc-ccCHHHHHHHHHHHHHHhCC--CCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 2211 12345556666667776654 467888889999999999999999999999999999999999887777777
Q ss_pred hcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCC
Q 015784 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (400)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~ 334 (400)
.++. ..++.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++.+ .+..|+++++++|+++++|||++.
T Consensus 242 ~~g~--~~i~~~~~~g~~~~~~~~~H~~~l~~~~i~~l~~~g~~v~~~p~s~~~~~~~~~~~~~~~~~Gv~v~lgtD~~~ 319 (472)
T 4dzh_A 242 QYGQ--RPLARLDRLGLVNDRLIAVHMTQLTEAEIHLCAERGVSVVHCPESNLKLASGFCPACALQRASVNLAIGTDGCA 319 (472)
T ss_dssp HHSS--CHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHTTCEEEECCCCTT
T ss_pred HhCC--CHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHHcCCEEEEChHHHHhcCCCCccHHHHHHCCCCEEEECCCCc
Confidence 6664 3889999999999999999999999999999999999999999999887 888999999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++..+++.+++.+....+... ..+.+++++++|+++|.|||++||+++++|+|++||.|
T Consensus 320 ~~~~~~~~~~~~~a~~~~~~~~------~~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~A 379 (472)
T 4dzh_A 320 SNNDLDMFSENRTAAILAKAVA------NDATALDAATTLRAATLGGARALGFGDRIGSIEVGKQA 379 (472)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHH------TCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBC
T ss_pred CCCCCCHHHHHHHHHHHhhhhc------CCCCcCCHHHHHHHHHHHHHHHcCCCCCCcccCCCCcC
Confidence 7678899999998776654221 13457999999999999999999999989999999987
|
| >3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-49 Score=376.28 Aligned_cols=366 Identities=29% Similarity=0.492 Sum_probs=307.7
Q ss_pred CcccEEEEecEEEeecCCC------ceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCc
Q 015784 17 SSSTMILHNAVIVTMDKES------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~------~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~ 90 (400)
.+++++|+|++|+++++.. .++++++|+|+||+|++|++..+. ...+.++||++|++|+|||||+|+|+.
T Consensus 21 ~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~----~~~~~~viD~~g~~v~PGlID~H~H~~ 96 (468)
T 3lnp_A 21 AHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSC----QIPATETLDLGQQVLMPGWVNAHGHAA 96 (468)
T ss_dssp CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTC----CCCEEEEEECCSEEEEECEEECSCCGG
T ss_pred ccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccc----cCCCCeEEeCCCcEEEeCeechhhChh
Confidence 4568999999999987665 578899999999999999986541 123568999999999999999999999
Q ss_pred ccccccccCCCChhHhhhhccccccC-CCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecc
Q 015784 91 QQLAKGIADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQS 169 (400)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 169 (400)
++.+++...+.++.+|+...+|+... ..++++.+......+.+++++|||++.++. ...+...+.+.+.|++..+...
T Consensus 97 ~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~ 175 (468)
T 3lnp_A 97 MSLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMY-FYPQQSGEAALAAGIRAVCFAP 175 (468)
T ss_dssp GGGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECC-SCHHHHHHHHHHHTCEEEEEEE
T ss_pred hhhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEecc
Confidence 99999988888999999998888655 477788888888888999999999999985 5677788888999999888776
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCC---CCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCC
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA---DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~ 246 (400)
.+... ..+ .......+....++++.+.... .+.+++.+.++..+..+++.+.++++.|+++|+++++|+.++
T Consensus 176 ~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~ 250 (468)
T 3lnp_A 176 VLDFP----TNY-AQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLDMPVQIHLHET 250 (468)
T ss_dssp ECSSC----CSS-CSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHTCCEEEEESCS
T ss_pred ccCCC----ccc-ccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCcEEEEeCCC
Confidence 65432 111 2234555666667777665543 457888888999899999999999999999999999999998
Q ss_pred chhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCc
Q 015784 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADIC 325 (400)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~ 325 (400)
..+.....+.++. ..++++...+.++.+.++.|+.++++++++++++.|+.+++||.+++++ .+..|+++++++|++
T Consensus 251 ~~~~~~~~~~~g~--~~i~~~~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~~~~~~~~~~~Gv~ 328 (468)
T 3lnp_A 251 DFEVSESLETFNK--RPTQRLADIGFLNERVSCVHMTQVDDGDIKILQKTGASIIHCPESNLKLASGFCPIAKLSAANIP 328 (468)
T ss_dssp HHHHHHHHHHHSS--CHHHHHHHTTCCSTTEEEEECCSCCHHHHHHHHHHCCEEEECHHHHHHTTCCCCCHHHHHHTTCC
T ss_pred HHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEeccCCCHHHHHHHHhcCCEEEEChhhhhhcCCCCCCHHHHHHCCCe
Confidence 7777766666654 3889999999999999999999999999999999999999999999887 788999999999999
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 326 v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++|||++.+++..+++.+++.+..+.+... ....+++++++|+++|.|||++||+++++|+|++||.|
T Consensus 329 v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~A 397 (468)
T 3lnp_A 329 LAIGTDGAASNNDLDMFSETKTAALLAKGVS------QDASAIPAIEALTMATLGGARALGIDDITGSLKPGKAA 397 (468)
T ss_dssp EEECCCCTTSSCCCCHHHHHHHHHHHHHHHH------TCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBC
T ss_pred EEEECCCCcCCCCCCHHHHHHHHHHHhhhcc------CCCCcCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcC
Confidence 9999999877677899999998776554221 12457999999999999999999999989999999987
|
| >4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-49 Score=377.56 Aligned_cols=365 Identities=30% Similarity=0.487 Sum_probs=309.7
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
++++++|+|++|+++++....+++++|+|+||+|++|++..+. . ...+.++||++|++|+|||||+|+|+.++.+++
T Consensus 6 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~-~--~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g 82 (451)
T 4dyk_A 6 NPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQA-M--RHGATEIRELPGMLLAPGLVNAHGHSAMSLFRG 82 (451)
T ss_dssp CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHH-T--TTCEEEEEEEEEEEEEECEEECCCCGGGGGGTT
T ss_pred chhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCcccc-c--cCCCCeEEeCCCCEEeecccchhhChhhHHhcc
Confidence 4568999999999977666788999999999999999986543 1 123568999999999999999999999999999
Q ss_pred ccCCCChhHhhhhccccccC-CCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCC
Q 015784 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (400)
...+.++.+|+....|+... .+++++.+..+...+.+++++|+|++.++. ...+...+.+.+.|++..+....+...
T Consensus 83 ~~~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~a~~~~g~r~~~~~~~~~~~- 160 (451)
T 4dyk_A 83 LADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMY-FYPQAICGVVHDSGVRAQVAIPVLDFP- 160 (451)
T ss_dssp SSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEEC-SCHHHHHHHHHHHTCEEEEEEEECSSC-
T ss_pred CCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEEchhhCCC-
Confidence 88889999999998888765 477888888888888999999999999985 567778888899999998877766432
Q ss_pred CCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh
Q 015784 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (400)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (400)
..+ .......+....++++.+.. .+.+++.+.++..+..+++.+.++++.|+++|+++++|+.++..+.+...+
T Consensus 161 ---~~~-~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~ 234 (451)
T 4dyk_A 161 ---IPG-ARDSAEAIRQGMALFDDLKH--HPRIRIAFGPHAPYTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAME 234 (451)
T ss_dssp ---BTT-BSSHHHHHHHHHHHHHHTTT--CSSEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred ---Ccc-ccCHHHHHHHHHHHHHHhcC--CCceEEEEecCCCCccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHH
Confidence 111 22345556666676776654 367888889999999999999999999999999999999998877777666
Q ss_pred hcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCC
Q 015784 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (400)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~ 334 (400)
.++. ..++.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++.+ .+..|+++++++|+++++|||+++
T Consensus 235 ~~g~--~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~l~~~g~~v~~~p~s~~~~~~~~~~~~~~~~~Gv~v~lgtD~~~ 312 (451)
T 4dyk_A 235 RNGE--RPLARLHRLGLLGPRFQAVHMTQVDNDDLAMLVETNSSVIHCPESNLKLASGFCPVEKLWQAGVNVAIGTDGAA 312 (451)
T ss_dssp HHSS--CHHHHHHHTTCCSTTEEEEECCCCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHHTCCEEECCCCGG
T ss_pred HhCC--CHHHHHHHCCCCCCCeEEEECCCCCHHHHHHHHHcCCEEEEChhhhhhccCCcccHHHHHhCCCeEEEECCCCc
Confidence 6654 3889999999999999999999999999999999999999999999887 788999999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++..+++.+++.+....+... ....+++++++|+++|.|||++||+++++|+|++||.|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~al~~~T~~~A~~lg~~~~~G~l~~G~~A 372 (451)
T 4dyk_A 313 SNNDLDLLGETRTAALLAKAVY------GQATALDAHRALRMATLNGARALGLERLIGSLEAGKAA 372 (451)
T ss_dssp GSSCCCHHHHHHHHHHHHHHHH------TCTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBC
T ss_pred cCCCCCHHHHHHHHHHHhhhhc------CCCCCCCHHHHHHHHHHHHHHHcCCCCCCcCcCCCCcC
Confidence 7667899999998775554321 12457999999999999999999999989999999987
|
| >4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-49 Score=373.07 Aligned_cols=365 Identities=28% Similarity=0.475 Sum_probs=305.9
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
++++++|+|++|+++++...++++++|+|+||+|++|++..+.+ ...+.++||++|++|+|||||+|+|+.++.+++
T Consensus 4 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~---~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g 80 (447)
T 4f0r_A 4 SRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAA---GLEADERLELPDHVLMPGLINLHGHSAMSLLRG 80 (447)
T ss_dssp -CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHT---TSCEEEEEEEEEEEEEECEEEEEECGGGGGGTT
T ss_pred CcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccc---cCCCCeEEeCCCcEEeeCccchhhChhhHhhcc
Confidence 45789999999999877667889999999999999999876543 123568999999999999999999999988888
Q ss_pred ccCCCChhHhhhhccccccC-CCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCC
Q 015784 97 IADDVDLMTWLHDRIWPYES-NMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGE 175 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 175 (400)
...+.++.+|+...+|+... ..++++.+......+.+++++|||++.++. ...+...+.+...|++.......+..
T Consensus 81 ~~~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~~~~~-- 157 (447)
T 4f0r_A 81 LADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMY-FYNAAVARAGLASGMRTFVGCSILEF-- 157 (447)
T ss_dssp SSCSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECB-SCHHHHHHHHHHHTCEEEEEEEECSS--
T ss_pred CCCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEcc-cCHHHHHHHHHHcCCeEEEEchhcCC--
Confidence 88888999999998887654 467788888888888999999999999986 56777888888999998887665542
Q ss_pred CCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh
Q 015784 176 GLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255 (400)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~ 255 (400)
+..+ .......+....++++++.. .+.+++...++..+..+++.+.++++.|+++|+++++|+.++..+.....+
T Consensus 158 --~~~~-~~~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~ 232 (447)
T 4f0r_A 158 --PTNY-ASNADDYIAKGMAERSQFLG--EDLLTFTLAPHAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVK 232 (447)
T ss_dssp --CCSS-CSSHHHHHHHHHHHHHTTTT--CTTEEEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred --Cccc-ccCHHHHHHHHHHHHHHhcC--CCceEEEEecCCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH
Confidence 1111 22344555666666665543 367888888888889999999999999999999999999998777766665
Q ss_pred hcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCC
Q 015784 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (400)
Q Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~ 334 (400)
.++. ..++++...+.++.+.++.|+.++++++++++++.|+.+++||.+++++ .+..|+++++++|+++++|||+++
T Consensus 233 ~~g~--~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~ 310 (447)
T 4f0r_A 233 EHGQ--RPLARLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAHNPASNMKLASGISPVSKLMDAGVAVGIGTDGAA 310 (447)
T ss_dssp HHSS--CHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHHHTTCEEEECCCCGG
T ss_pred HcCC--CHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEECchhhhhcCCCCCcHHHHHHCCCcEEEeCCCCc
Confidence 5654 3789999999999999999999999999999999999999999999887 788999999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++..+++.+++.+....+... ....+++++++|+++|.|||++||+++++|+|++||.|
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~~al~~~T~n~A~~lg~~~~~G~l~~G~~A 370 (447)
T 4f0r_A 311 SNNKLDMLAETRLAALLAKVGT------LDPTSVPAAAAIRMATLNGARALGIADKVGSVKVGKQA 370 (447)
T ss_dssp GTCCCCHHHHHHHHHHHHHHHH------TCTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBC
T ss_pred CCCCCCHHHHHHHHHHHhhhhc------cCCCCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcC
Confidence 7667899999988775554221 12457999999999999999999999989999999987
|
| >3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-47 Score=365.84 Aligned_cols=366 Identities=25% Similarity=0.379 Sum_probs=304.2
Q ss_pred EEEEec-EEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc-
Q 015784 21 MILHNA-VIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA- 98 (400)
Q Consensus 21 ~li~n~-~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~- 98 (400)
++|+|+ +|+++++....+++++|+|+||+|++|++..+ ...+.++||++|++|+|||||+|+|+.++.+++..
T Consensus 2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~-----~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~ 76 (456)
T 3ls9_A 2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLS-----DRSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQ 76 (456)
T ss_dssp EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCC-----CTTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGG
T ss_pred EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCC-----CCCCCeEEeCCCCEEecCeeecccccchhhhccccc
Confidence 689999 88888876778899999999999999998633 12357899999999999999999999999998874
Q ss_pred -CCCChhHhhhhc------cccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------CCHHHHHHHHHHcCCe
Q 015784 99 -DDVDLMTWLHDR------IWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLR 163 (400)
Q Consensus 99 -~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------~~~~~~~~~~~~~g~~ 163 (400)
.+.++.+|+... .++. ..+++++.+......+.+++++|+|++.+++. ...+...+.+.+.|++
T Consensus 77 ~~~~~l~~~l~~~~~~~~~~~~~-~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r 155 (456)
T 3ls9_A 77 LERVTMASWLEGVLTRSAGWWRD-GKFGPDVIREVARAVLLESLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIR 155 (456)
T ss_dssp GSSCCHHHHHHHHHHHHHHHHHT-TSSSHHHHHHHHHHHHHHHHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCE
T ss_pred CCCCCHHHHHHHhcccccccccc-ccCCHHHHHHHHHHHHHHHHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCE
Confidence 478999999876 4442 26888999999988999999999999999731 2245568888999999
Q ss_pred EEEecccccCCC---CCCcccccCCchHHHHHHHHHHHHhcc-CCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCee
Q 015784 164 ACLVQSTMDCGE---GLPASWAVRTTDDCIQSQKELYAKHHH-AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239 (400)
Q Consensus 164 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v 239 (400)
..+....+..+. ..++..........+....++++.+.. ...+.+.+...++..+..+++.++++++.|+++|+++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v 235 (456)
T 3ls9_A 156 FHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYDVRL 235 (456)
T ss_dssp EEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHTCEE
T ss_pred EEEEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCCCCE
Confidence 988776655421 123333334455666777777777765 2346788888999999999999999999999999999
Q ss_pred eEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHH
Q 015784 240 HMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKE 318 (400)
Q Consensus 240 ~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~ 318 (400)
++|+.++..+ +...+.++. ..++.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++++ .+..|++.
T Consensus 236 ~~H~~e~~~~-~~~~~~~~~--~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~l~~~~~~~~~ 312 (456)
T 3ls9_A 236 HTHFYEPLDA-GMSDHLYGM--TPWRFLEKHGWASDRVWLAHAVVPPREEIPEFADAGVAIAHLIAPDLRMGWGLAPIRE 312 (456)
T ss_dssp EEEECCTTHH-HHHHHHHSS--CHHHHHHHTTCSSTTEEEEECCSCCGGGHHHHHHHTCEEEECHHHHHHTTCCCCCHHH
T ss_pred EEEeCCCchH-HHHHHHhCC--CHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEEChhHHhhcCCCcchHHH
Confidence 9999999887 777766664 3889999999999999999999999999999999999999999999988 88899999
Q ss_pred HHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCc
Q 015784 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (400)
Q Consensus 319 ~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~ 398 (400)
++++|+++++|||++.+++..+++.+++.+....+... ....+++++++++|+++|.|||++||+++ +|+|++||
T Consensus 313 ~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~al~~~T~~~A~~lg~~~-~G~l~~G~ 387 (456)
T 3ls9_A 313 YLDAGITVGFGTTGSASNDGGNLLGDLRLAALAHRPAD----PNEPEKWLSARELLRMATRGSAECLGRPD-LGVLEEGR 387 (456)
T ss_dssp HHHTTCEEEECCCCTTSSCCCCHHHHHHHHHHHTGGGS----TTCGGGSCCHHHHHHHTTHHHHHHTTCTT-SSCCSTTS
T ss_pred HHHCCCcEEEECCCCccCCCCCHHHHHHHHHHHhcccc----ccccccCCCHHHHHHHHHHHHHHHhCCCC-CCccCCCC
Confidence 99999999999999887677899999999887765331 00122369999999999999999999998 89999999
Q ss_pred CC
Q 015784 399 KV 400 (400)
Q Consensus 399 ~A 400 (400)
.|
T Consensus 388 ~A 389 (456)
T 3ls9_A 388 AA 389 (456)
T ss_dssp BC
T ss_pred cc
Confidence 87
|
| >2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-44 Score=346.58 Aligned_cols=372 Identities=27% Similarity=0.387 Sum_probs=258.7
Q ss_pred ccEEEEecE-EEeecCCCc-----eeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccc
Q 015784 19 STMILHNAV-IVTMDKESR-----VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (400)
Q Consensus 19 ~~~li~n~~-i~~~~~~~~-----~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~ 92 (400)
++++|+|++ |++++ ... .+.+++|+|+||||++|++..+ ..+.++||++|++|+|||||+|+|+...
T Consensus 10 ~~~li~n~~~i~~~~-~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~------~~~~~viD~~G~~v~PG~ID~H~H~~~~ 82 (492)
T 2paj_A 10 PSTLIRNAAAIMTGG-RGTADDPSRVPGPDIRIVGDTIDAIGALAP------RPGETIVDATDCVIYPAWVNTHHHLFQS 82 (492)
T ss_dssp CEEEEECBSEEBCCC-CSSSSSCSBCCCCCEEEETTEEEEESSCCC------CTTCEEEECBTCEEEECEECCCCCGGGG
T ss_pred CCeEEECCEEEEecC-CccccccceecccEEEEECCEEEEEcCCCC------CCCCeEEECCCcEEeeCccccccChhhH
Confidence 578999999 99875 220 3467899999999999997542 1246899999999999999999999876
Q ss_pred cccccc--CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-C-------CHHHHHHHHHHcCC
Q 015784 93 LAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-Q-------HVSEMAKAVELLGL 162 (400)
Q Consensus 93 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-~-------~~~~~~~~~~~~g~ 162 (400)
..++.. .+.++.+|+....|+....+++++.+......+..+++.|||++.+++. . ......+.....++
T Consensus 83 ~~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g~ 162 (492)
T 2paj_A 83 LLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGL 162 (492)
T ss_dssp GCCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTC
T ss_pred hhcCccCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcCC
Confidence 655543 4466788988888888888888888888888889999999999999762 1 23556667777888
Q ss_pred eEEEecccccCCC----CCCcccccCCchHHHHHHHHHHHHhccCCC-CCeEEEeecccc-ccCCHHHHHHHHHHHHHcC
Q 015784 163 RACLVQSTMDCGE----GLPASWAVRTTDDCIQSQKELYAKHHHAAD-GRIRIWFGIRQI-MNATDRLLLETRDMAREFK 236 (400)
Q Consensus 163 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~e~l~~~~~~a~~~~ 236 (400)
+.......+.... ...+.+........+....++.+.+..... +.+++...++.. ...+++.+.++++.|++.|
T Consensus 163 r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g 242 (492)
T 2paj_A 163 RFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLG 242 (492)
T ss_dssp EEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHHHHHHHHHHHHHTT
T ss_pred EEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEecccCCCCCCHHHHHHHHHHHHHcC
Confidence 8877655443211 011111111223345555566665544322 457777777777 7889999999999999999
Q ss_pred CeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCccc
Q 015784 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAP 315 (400)
Q Consensus 237 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~ 315 (400)
+++.+|+.+...+.+...+.++. ..++++...+.++.+.++.|+.++++++++++++.|+.+++||.+++++ .+.+|
T Consensus 243 ~~v~~H~~~~~~~~~~~~~~~g~--~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~l~~~gv~v~~~p~~~~~l~~~~~p 320 (492)
T 2paj_A 243 LRMHSHLSETVGYQDSAYSMYGK--SPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQSNGRLGSGICP 320 (492)
T ss_dssp CEEEEECC-------------CC--CHHHHHHHTTCCSTTEEEESCCSCCHHHHHHHHHHTCEEEECHHHHHCC-----C
T ss_pred CcEEEEeCCChHHHHHHHHHcCC--CHHHHHHHCCCCCCCcEEEEEecCCHHHHHHHHHcCCEEEECchhhcccCCCCCC
Confidence 99999999876655555554443 4788888899888889999999999999999999999999999998877 67789
Q ss_pred HHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccc---ccc-----CCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 316 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE---VFA-----NGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 316 ~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
++.++++|+++++|||+++++...+++.+++.+..+.+... .+. .....+.+++++++|+++|.|||++||+
T Consensus 321 ~~~~~~~Gv~v~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ls~~~al~~aT~~~A~~lgl 400 (492)
T 2paj_A 321 VREMADAGVPVSIGVDGAASNEAADMISEVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVIHWGTAGGARVMGL 400 (492)
T ss_dssp CTTHHHHTCCEEECCCHHHHCSCCSHHHHHHHHHHHHHHTC-------------------CCHHHHHHHHTHHHHHHHTC
T ss_pred HHHHHHCCCcEEEeCCCCCCCCCCCHHHHHHHHHHHhhhhcccccccccccccccCCcCcCCHHHHHHHHHHHHHHHhCC
Confidence 99999999999999998754456789999988765543211 000 0001235699999999999999999999
Q ss_pred CCCccccccCcCC
Q 015784 388 DNDIGSLEAGKKV 400 (400)
Q Consensus 388 ~~~~G~i~~G~~A 400 (400)
+ ++|+|++||+|
T Consensus 401 ~-~~Gsl~~Gk~A 412 (492)
T 2paj_A 401 D-EVGKVAVGYAA 412 (492)
T ss_dssp T-TSSCCSTTSBC
T ss_pred C-CccccCCCCcc
Confidence 8 68999999987
|
| >2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-43 Score=338.90 Aligned_cols=372 Identities=21% Similarity=0.332 Sum_probs=282.6
Q ss_pred cEEEEecEEEeecCC-----------CceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcC
Q 015784 20 TMILHNAVIVTMDKE-----------SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88 (400)
Q Consensus 20 ~~li~n~~i~~~~~~-----------~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H 88 (400)
.++|.+++|+++.+. ..++++++|+|+||+|++||+..+++..+ .+.++||++|++|+|||||+|+|
T Consensus 4 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~--~~~~viD~~G~~v~PG~ID~H~H 81 (475)
T 2ood_A 4 TTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAH--PGVEITHIKDRIIVPGFIDGHIH 81 (475)
T ss_dssp CEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHS--TTCEEEEEEEEEEEECEEEEEEE
T ss_pred cceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhcccc--CCCeEEeCCCcEEecceecCccc
Confidence 357889999987652 24568899999999999999865433211 24689999999999999999999
Q ss_pred CcccccccccCCCChhHhhhhccccccCCC-ChhhHHHHHHHHHHHHHhcCcceeeccCcCC---HHHHHHHHHHcCCeE
Q 015784 89 TSQQLAKGIADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQH---VSEMAKAVELLGLRA 164 (400)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~~~~~~~~g~~~ 164 (400)
+.++.+++.. +.++.+|+....|+....+ +.++.+......+..++++|||++.+++... .+...+.++..++|.
T Consensus 82 l~~~~~~g~~-~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~ 160 (475)
T 2ood_A 82 LPQTRVLGAY-GEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFEEASRRNMRV 160 (475)
T ss_dssp GGGTTCTTCC-SCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHHTCCE
T ss_pred HHhHhhcCCC-CCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEecccCchhHHHHHHHHHHcCCeE
Confidence 9877665543 4568889888776655443 4556666667778899999999999976433 345567778888887
Q ss_pred EEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHc-CCeeeEec
Q 015784 165 CLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF-KTGIHMHV 243 (400)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~-~~~v~~H~ 243 (400)
..+......+ .+... .......+....++++.+.. .+.++..+.++.....+++.+..+++.+++. |+++++|+
T Consensus 161 ~~g~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~g~~v~~H~ 235 (475)
T 2ood_A 161 IAGLTGIDRN--APAEF-IDTPENFYRDSKRLIAQYHD--KGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHI 235 (475)
T ss_dssp EECCEECCSS--SCTTT-CCCHHHHHHHHHHHHHHHTT--BTTEEEEEEECBGGGCCHHHHHHHHHHHHHCTTSEEEEEC
T ss_pred EEEeeecccC--CCccc-ccCHHHHHHHHHHHHHHhcc--CCceEEEEeccccCcCCHHHHHHHHHHHHhCCCCcEEEee
Confidence 6554443321 11111 12233445556666666643 3467777788888889999999999999999 99999999
Q ss_pred CCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHc
Q 015784 244 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHA 322 (400)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~ 322 (400)
.++..+.+...+.++..+..++.+...+.++.+.++.|+.++++++++++++.|+.+++||.+++.+ .+.+|+++++++
T Consensus 236 ~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~~~~~~~~i~~~~~~g~~~~~~P~~~~~l~~~~~~~~~~~~~ 315 (475)
T 2ood_A 236 SENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNLFLGSGLFRLGRATDP 315 (475)
T ss_dssp SCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCCHHHHTCT
T ss_pred CCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEeecCCHHHHHHHHHcCCEEEEChhhhhhcccCcCCHHHHHhC
Confidence 9887777777766665556788888888888889999999999999999999999999999998877 788999999999
Q ss_pred CCc--EEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCC----------CCCCCCCHHHHHHHHhHHHHHHcCCCCC
Q 015784 323 DIC--VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT----------TDPAALPAETVLRMATINGAKSVLWDND 390 (400)
Q Consensus 323 Gv~--v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~~al~~~T~~~A~~lg~~~~ 390 (400)
|++ +++|||+++. ...+++.+++.+....+.......+. ....+++++++|+++|.|||++||++++
T Consensus 316 Gv~~~~~lgTD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ls~~~al~~~T~~~A~~lgl~~~ 394 (475)
T 2ood_A 316 EHRVKMSFGTDVGGG-NRFSMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGGAEGLYIDDK 394 (475)
T ss_dssp TSCCEEEECCCBTTB-SCCCHHHHHHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHHHHHTTCTTT
T ss_pred CCCCcEEEEccCCCC-CCcCHHHHHHHHHHHhcccchhccCCcccccccccccccCCCCHHHHHHHHHHHHHHHhCCCCC
Confidence 999 9999999763 44689999888765432100000000 0015699999999999999999999988
Q ss_pred ccccccCcCC
Q 015784 391 IGSLEAGKKV 400 (400)
Q Consensus 391 ~G~i~~G~~A 400 (400)
+|+|++||+|
T Consensus 395 ~GsL~~Gk~A 404 (475)
T 2ood_A 395 LGNFEPGKEA 404 (475)
T ss_dssp SSSCCTTSBC
T ss_pred ceeeCCCCcc
Confidence 9999999987
|
| >2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-43 Score=334.45 Aligned_cols=369 Identities=21% Similarity=0.303 Sum_probs=277.1
Q ss_pred cccEEEEecEEEeec-CCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 18 SSTMILHNAVIVTMD-KESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 18 ~~~~li~n~~i~~~~-~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
+.+++|+|++|++++ +...++++++|+|+||+|++|++.... +..+.++||++|++|+|||||+|+|+..+..++
T Consensus 8 m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~----~~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g 83 (439)
T 2i9u_A 8 INLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPD----KYKGNPIIDFRNNIIIPGMNDLHAHASQYKNLG 83 (439)
T ss_dssp -CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCG----GGTTSCEEEEEEEEEEECEEEEEEEGGGGGGTT
T ss_pred cccEEEEeeEEEecCCccceEEeccEEEEECCEEEEecccccc----cCCCceEEcCCCeEEEecceecccccchHhhhC
Confidence 357899999999976 223456789999999999999964321 112458999999999999999999998877766
Q ss_pred ccCCCChhHhhhhccccccCCC-ChhhHHHHHHHHHHHHHhcCcceeeccCcCCH---HHHHHHHHHcCCeEEEeccccc
Q 015784 97 IADDVDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~---~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
...+.++.+|+....|+....+ ++++.+......++.+++.|||++.+++.... ....+...+.+++...+...+.
T Consensus 84 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~ 163 (439)
T 2i9u_A 84 IGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMD 163 (439)
T ss_dssp CCCSSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEECC
T ss_pred CcCCCCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEccccccchHHHHHHHHHHcCCEEEEEeeecc
Confidence 6666788899887666544333 45555666666778899999999999864443 4456777788888766554443
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhH
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (400)
.. .+..+ .......+....++++.+... .+.+++.+.++.....+++.+.++++.|++.|+++.+|+.++..+.+.
T Consensus 164 ~~--~p~~~-~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~ 239 (439)
T 2i9u_A 164 YN--CPDYL-TENYITSLNDTEEIILKYKDK-SNIVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAV 239 (439)
T ss_dssp SS--CCTTS-CCCHHHHHHHHHHHHHHHTTT-CSSEEECBEECCGGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHH
T ss_pred cc--CCccc-chhHHHHHHHHHHHHHHHhCC-CCceEEEEecCCcCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHHH
Confidence 21 11111 111223344556666665432 345666666666667789999999999999999999999988776666
Q ss_pred HhhhcCCCCChHHHHhHhCCCC-CCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcC
Q 015784 253 VMDTRKVDHGTVTFLDKIEFLQ-NNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGT 330 (400)
Q Consensus 253 ~~~~~~~~~~~~~~l~~~~~~~-~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gt 330 (400)
..+.++.....++.+...++.+ .+.++.|+.++++++++++++.|+.+++||.+++++ .+.+|++.++++|+++++||
T Consensus 240 ~~~~~~~~~~~~~~~~~~g~~~~~~~~i~H~~~~~~~~~~~l~~~g~~~~~~p~~~~~l~~~~~~~~~~~~~Gv~~~lgt 319 (439)
T 2i9u_A 240 VKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGSGMMPVRKYLNLGINVVLGS 319 (439)
T ss_dssp HHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHHHTTCEEEECHHHHHHTTCCCCCHHHHHHTTCEEEECC
T ss_pred HHHHhCCCCCHHHHHHHcCCCCCCCeEEEEEecCCHHHHHHHHHcCCEEEECccchhhcccccCCHHHHHHCCCcEEEec
Confidence 6665554334778888888887 888999999999999999999999999999998877 66789999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 331 DGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 331 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
|+++. ...+++.+++.+....+..... . .....+++++++|+++|.|||++|| ++|+|++||+|
T Consensus 320 D~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ls~~~al~~~T~~~A~~lg---~~Gsl~~G~~A 383 (439)
T 2i9u_A 320 DISAG-HTCSLFKVIAYAIQNSKIKWQE-S-GKKDMFLSTSEAFYMATKKGGSFFG---KVGSFEEGYDF 383 (439)
T ss_dssp CBTTB-CCSCHHHHHHHHHHHHHHHHHH-T-TSCSCCCCHHHHHHHHTHHHHTTTS---SCSSCSTTCBC
T ss_pred CCCCC-CCcCHHHHHHHHHHHhcccccc-c-cCCCCCCCHHHHHHHHHHHHHHHhc---cCCccCCCCcc
Confidence 99763 4678999998877554321100 0 1234579999999999999999999 47999999987
|
| >3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-44 Score=340.46 Aligned_cols=350 Identities=20% Similarity=0.288 Sum_probs=279.3
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++++ ++++++|+| ||+|++||+..+++..++ +.++||++|++|+|||||+|+|+.++.+++....
T Consensus 2 ~~i~~~~v~~~~~---~~~~~~v~i-~g~I~~Vg~~~~~~~~~~--~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~ 75 (427)
T 3v7p_A 2 RIIKPFAILTPQT---IIQDKAVAF-DKKIEAIDTVENLIKKYP--NAAVEHDENSLLLPGFANPHLHLEFSANKATLQY 75 (427)
T ss_dssp EEEEEEEEECSSS---EEESCEEEE-SSBEEEEECHHHHHHHCT--TSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCC
T ss_pred EEEECCEEEcCCC---EEeCcEEEE-CCEEEEecChhhhccccC--CceEEeCCCCEEecCEeecccCcchhhccccccc
Confidence 5899999998764 778999999 999999998766554333 4689999999999999999999999999988888
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (400)
.++.+|+...+++... .++++.+......+.+++++|+|++.++.... ...+.+.+.|++..+....+... ..
T Consensus 76 ~~l~~wl~~~~~~~~~-~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~--~~~~a~~~~Gir~~~~~~~~~~~----~~ 148 (427)
T 3v7p_A 76 GDFIPWLYSVIRHRED-LLPLCDGACLEQTLSSIIQTGTTAIGAISSYG--EDLQACIDSALKVVYFNEVIGSN----AA 148 (427)
T ss_dssp SSHHHHHHHHHHHHHH-HHHHSCHHHHHHHHHHHHHTTEEEEEEEESSS--TTHHHHHHBSSEEEEEEEECBCC----GG
T ss_pred CCHHHHHHHHHHhHHh-cCHHHHHHHHHHHHHHHHHhCCEEEEEecCcH--HHHHHHHhcCCeEEEeccccCCC----hh
Confidence 8999999998877653 45556677777888999999999999975322 23578889999998776554321 11
Q ss_pred cccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCC-
Q 015784 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV- 259 (400)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~- 259 (400)
.....+....+.++.+.....+.++..++++..+..+++.++.+++.|+++|+++++|+.|+..+.+.+.+.++.
T Consensus 149 ----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~ 224 (427)
T 3v7p_A 149 ----TADVMYASFLERFHQSKKHENERFKAAVAIHSPYSVHYILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEF 224 (427)
T ss_dssp ----GHHHHHHHHHHHHHHHHTTCBTTEEEEEEECCTTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHH
T ss_pred ----hhhHHHHHHHHHHHHhhhccCCceEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcc
Confidence 122233344444555555556788888999999999999999999999999999999999999888777655441
Q ss_pred ---------CCChHHHHhH-hCC-CCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEE
Q 015784 260 ---------DHGTVTFLDK-IEF-LQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVS 327 (400)
Q Consensus 260 ---------~~~~~~~l~~-~~~-~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~ 327 (400)
...+++.+.. .+. ++.+.++.|+.++++++++++++.++.+++||.+|+.+ .+.+|++.+ +|++++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~~~~~~~~~~~~--~Gv~v~ 302 (427)
T 3v7p_A 225 AKFFKEFLNQTRPVNDTKSFLELFKELHTLFVHMVWANEEEIQTIASYNAHIIHCPISNRLLGNGVLDLEKI--KSIPYA 302 (427)
T ss_dssp HHHHHHHTCCCSCSSCHHHHHHTTTTSEEEEEECTTCCHHHHHHHHHSEEEEEECHHHHHHTTCCCCCTTTT--TTSCEE
T ss_pred hhhhhhhccCCCcccCHHHHHhhhcCCCEEEEECCCCCHHHHHHHHHcCCEEEECHHHHHHhcCCCCCHHHH--CCCeEE
Confidence 1112221222 444 56788999999999999999999999999999999988 788899999 999999
Q ss_pred EcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 328 LGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 328 ~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+|||++.+++..+++.+++.+....+.. ...++++++|+++|.|||+++|++ .|+|++|+.|
T Consensus 303 lgtD~~~~~~~~~~~~~~~~a~~~~~~~---------~~~~~~~~~~~~~t~~~a~~~g~~--~g~l~~G~~A 364 (427)
T 3v7p_A 303 IATDGLSSNYSLNMYEELKAALFVHPNK---------EATTFAKELIIRATKAGYDALGFE--GGEIAVGKDA 364 (427)
T ss_dssp ECCCCTTSCSCCCHHHHHHHHHHHSTTS---------CHHHHHHHHHHHHTHHHHHHHTCS--CSSCCTTSBC
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHhccCC---------CcccCHHHHHHHHHHHHHHHhCCC--CceeCCCCcc
Confidence 9999877767899999999987665321 223678999999999999999996 6999999987
|
| >4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-44 Score=338.45 Aligned_cols=358 Identities=15% Similarity=0.132 Sum_probs=282.5
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
++++++++|+.+. + ..+++++|+|+||+|++|++..+ .++||++|++|+|||||+|+|+.++.+++
T Consensus 10 ~m~~l~~~~~~~~--~---~~~~~~~v~I~~g~I~~Ig~~~~---------~~~iD~~g~~v~PGlID~H~H~~~~~~rg 75 (458)
T 4f0l_A 10 SQHFIHARQALLP--D---GWAENVRIGIAGGVICSIETGVL---------AGPDDERQSVVVAGMANLHSHAFQYGMAG 75 (458)
T ss_dssp -CEEEEEEEEEET--T---EEEEEEEEEEETTEEEEEECSCC---------CCTTCEEEEEEEECEEEEEECGGGGGGTT
T ss_pred chhHhhhcceecc--C---ccccCceEEEECCEEEEEeCCCc---------cccccCCCCEEccCceecccchhhhhhcc
Confidence 4556788888773 2 35788999999999999998542 35799999999999999999999998888
Q ss_pred ccC-----CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------------CHHHHHHHH
Q 015784 97 IAD-----DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAV 157 (400)
Q Consensus 97 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------------~~~~~~~~~ 157 (400)
... +.++.+|+. .+|+....+++++.+..+...+.+++++|+|++.++... ..+...+.+
T Consensus 76 ~~~~~~~~~~~~~~w~~-~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~ 154 (458)
T 4f0l_A 76 LAERRGPSADSFWSWRE-IMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAA 154 (458)
T ss_dssp SSCBCCSCSSTTHHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHH
T ss_pred cccccccCCCcHHHHHH-HhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHH
Confidence 765 678889975 467777778999999999889999999999999985311 145778889
Q ss_pred HHcCCeEEEecccccCCCC---CCccc---ccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHH
Q 015784 158 ELLGLRACLVQSTMDCGEG---LPASW---AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDM 231 (400)
Q Consensus 158 ~~~g~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ 231 (400)
.+.|++..+...++..+.. .+... .............+..+.+.. .+.+.+.++++..+..+++.++.+++.
T Consensus 155 ~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~ 232 (458)
T 4f0l_A 155 TTAGMGLTLLPVFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEG--FEGAVLGVAPHSLRAVTPDELDSVTQL 232 (458)
T ss_dssp HHHTCEEEEEEEECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTT--CTTCEECBEECBTTTSCHHHHHHHTTS
T ss_pred HHcCCeEEEecchhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhcc--CCceEEEEecCCcCcCCHHHHHHHHHH
Confidence 9999999887666543210 01110 011223333334444444433 346677778888899999999999998
Q ss_pred HHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-
Q 015784 232 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM- 310 (400)
Q Consensus 232 a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~- 310 (400)
|+ |+++++|+.|+..+.+.+.+.++. .+++.+...+.++.+.++.|+.++++++++++++.++.+++||.+++++
T Consensus 233 a~--g~~v~~H~~e~~~~~~~~~~~~g~--~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~g~~~~~~p~s~~~l~ 308 (458)
T 4f0l_A 233 LP--DAPVHIHVAEQVKEVEDCIAWSGK--RPVEWLLDHQDVTARWCLIHATHMSDEETKHMAKAGAIAGLCPVTEANLG 308 (458)
T ss_dssp ST--TSCEEEEESCSHHHHHHHHHHHSS--CHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTT
T ss_pred hc--CCCEEEEeCCCHHHHHHHHHHhCC--CHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHcCCeEEECcccccccc
Confidence 88 999999999999888888877775 4889999999999999999999999999999999999999999999988
Q ss_pred cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCC
Q 015784 311 LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDND 390 (400)
Q Consensus 311 ~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~ 390 (400)
.+..|+++++++|+++++|||.. .+.+++.+++.+....+...........+..++++++|+++|.|||++||+ +
T Consensus 309 ~~~~~~~~~~~~Gv~v~lgtD~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~T~~~A~~lg~-~- 383 (458)
T 4f0l_A 309 DGTFNATEFAAAGGKFGIGSDSN---VLIGIGDELRQLEYSQRLYHRARNVLAANEGSTGRALFDGAVLGGNIAMGR-P- 383 (458)
T ss_dssp CCCCCHHHHHHTTCEEEECCBTT---SSCCHHHHHHHHHHHHHHHHTCSSCSCSTTSBHHHHHHHHHHHHHHHHTTC-T-
T ss_pred CCCccHHHHHHCCCeEEEECCCC---CCCCHHHHHHHHHHHHhhhccCccccCCcccCCHHHHHHHHHHHHHHHhCC-C-
Confidence 78899999999999999999964 457899999987766543221111122345699999999999999999999 3
Q ss_pred ccccccCcCC
Q 015784 391 IGSLEAGKKV 400 (400)
Q Consensus 391 ~G~i~~G~~A 400 (400)
+|+|++||.|
T Consensus 384 ~G~l~~G~~A 393 (458)
T 4f0l_A 384 EDGLKKGASA 393 (458)
T ss_dssp TCSSSTTSBC
T ss_pred CCcCCCCCcC
Confidence 6999999987
|
| >3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-43 Score=332.03 Aligned_cols=354 Identities=19% Similarity=0.243 Sum_probs=279.6
Q ss_pred EEecEEEeecCCCceeeceeEEE-eCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC--
Q 015784 23 LHNAVIVTMDKESRVFRNGGVFV-VQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD-- 99 (400)
Q Consensus 23 i~n~~i~~~~~~~~~~~~~~i~v-~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~-- 99 (400)
+..++++.++ .++++++|+| +||+|++|++..+ ..+++|++| +|||||||+|+|+.++.+++...
T Consensus 4 ~~~~~~~~~~---~~~~~~~v~i~~~g~I~~ig~~~~--------~~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~ 71 (453)
T 3mdu_A 4 IFAERALLPE---GWARNVRFEISADGVLAEIRPDAN--------ADGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVA 71 (453)
T ss_dssp EEEEEEEETT---EEEEEEEEEECTTSBEEEEESSCC--------CTTSEECSS-CEEECEEEEEECGGGGGGTTTTCCC
T ss_pred cchhheecCC---ceecCeEEEEecCCEEEEecCCCC--------cccccccCC-cccccceecccchHHHhhccccccc
Confidence 3455566544 3778999999 8999999998653 235679999 99999999999999999998765
Q ss_pred ---CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------------CHHHHHHHHHHcCC
Q 015784 100 ---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------------HVSEMAKAVELLGL 162 (400)
Q Consensus 100 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------------~~~~~~~~~~~~g~ 162 (400)
+.++.+|+.. +|+....+++++.+..++..+.+++++|||++.++... ..+...+++++.|+
T Consensus 72 ~~~~~~l~~wl~~-~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gi 150 (453)
T 3mdu_A 72 GNPNDSFWTWREL-MYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGI 150 (453)
T ss_dssp SSTTCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTC
T ss_pred cCCCCcHHHHHHH-HhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCC
Confidence 4688999854 57888889999999999999999999999999985311 14567888999999
Q ss_pred eEEEecccccCCCC--CCccc----ccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcC
Q 015784 163 RACLVQSTMDCGEG--LPASW----AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (400)
Q Consensus 163 ~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~ 236 (400)
+..++..++..... .++.. ........+....+....+... +. .+.++++..+..+++.++.+++.|+ .|
T Consensus 151 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~p~~~~~~~~e~l~~~~~~A~-~g 226 (453)
T 3mdu_A 151 GLTLLPVLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAA--GH-SLGLCFHSLRAVTPQQIATVLAAGH-DD 226 (453)
T ss_dssp EEEEEECBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHH--TC-EECEEEEETTTSCHHHHHHHHTSSC-TT
T ss_pred eEEEecchhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcC--CC-eEEEecCCCCcCCHHHHHHHHHHHh-cC
Confidence 99887776654321 11111 0122333344444444444332 23 5567888889999999999999999 99
Q ss_pred CeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCccc
Q 015784 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAP 315 (400)
Q Consensus 237 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~ 315 (400)
+++++|+.|+..+.+.+.+.++.. +++.+...+.++.++++.|+.++++++++++++.|+.+++||.+++++ .+..|
T Consensus 227 ~~v~~H~~e~~~e~~~~~~~~g~~--~v~~l~~~g~~~~~~~~~H~~~~~~~~i~~la~~g~~v~~~P~sn~~lg~g~~p 304 (453)
T 3mdu_A 227 LPVHIHIAEQQKEVDDCQAWSGRR--PLQWLYENVAVDQRWCLVHATHADPAEVAAMARSGAVAGLCLSTEANLGDGIFP 304 (453)
T ss_dssp SCEEEEESCSHHHHHHHHHHHSSC--HHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCC
T ss_pred CCEEEEeCCCHHHHHHHHHHhCCC--HHHHHHHcCCCCCCeEEEEcCCCCHHHHHHHHHcCCEEEECchhHhhcCCCCCC
Confidence 999999999998888888777754 889999999999999999999999999999999999999999999988 78999
Q ss_pred HHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCC-CCCCCCCHHHHHHHHhHHHHHHcCCCCCcccc
Q 015784 316 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT-TDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (400)
Q Consensus 316 ~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i 394 (400)
+++|+++|+++++|||++ .+.+++.+++.+....+......... ...++++++++|+++|.|||+++|+ ++|+|
T Consensus 305 ~~~~~~~Gv~v~lgtD~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~~~--~~G~l 379 (453)
T 3mdu_A 305 ATDFLAQGGRLGIGSDSH---VSLSVVEELRWLEYGQRLRDRKRNRLYRDDQPMIGRTLYDAALAGGAQALGQ--PIGSL 379 (453)
T ss_dssp HHHHHHTTCEEEECCBTC---SCCCHHHHHHHHHHHHHHHHTCSCCSCBTTBCCHHHHHHHHHHHHHHHHHTS--SCSSC
T ss_pred HHHHHHCCCEEEEECCCC---CCCCHHHHHHHHHHHHhhhccCCccccCcccCCCHHHHHHHHHHHHHHHhCC--CCCcc
Confidence 999999999999999975 34689999998876554321111111 1223799999999999999999999 47999
Q ss_pred ccCcCC
Q 015784 395 EAGKKV 400 (400)
Q Consensus 395 ~~G~~A 400 (400)
++|+.|
T Consensus 380 ~~G~~A 385 (453)
T 3mdu_A 380 AVGRRA 385 (453)
T ss_dssp CTTSBC
T ss_pred CCCCcC
Confidence 999987
|
| >2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-43 Score=328.43 Aligned_cols=351 Identities=19% Similarity=0.205 Sum_probs=255.0
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+.+++|+|++|+++++ ..+.+++|+|+||||++|++..+++... .+.++||++ ++|+|||||+|+|+.....++
T Consensus 35 ~~~~~li~n~~v~~~~~--~~~~~~~V~I~~g~I~~vg~~~~~~~~~--~~~~viD~~-~~v~PGlID~H~H~~~~~~~g 109 (420)
T 2imr_A 35 AHTPRLLTCDVLYTGMG--GAQSPGGVVVVGETVAAAGHPDELRRQY--PHAAEERAG-AVIAPPPVNAHTHLDMSAYEF 109 (420)
T ss_dssp -CCEEEEEESEEECC-----EESSEEEEEETTEEEEEECHHHHHHHC--TTCEEEECC-SEESSCCCEEEEESSCCHHHH
T ss_pred ccccEEEECCEEEeCCC--CeeeccEEEEECCEEEEecCcccccccC--CCCeeecCC-eEECCCCEecCcCcchhhhhh
Confidence 45678999999998653 3567899999999999999854432211 246899999 999999999999998754443
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCC
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEG 176 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 176 (400)
.. .++.+|+....++....+++ ......+..++++|||++.+++. ......+.....+++.......+.
T Consensus 110 ~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~GvTtv~d~~~-~~~~~~~~~~~~g~r~~~~~~~~~---- 178 (420)
T 2imr_A 110 QA--LPYFQWIPEVVIRGRHLRGV----AAAQAGADTLTRLGAGGVGDIVW-APEVMDALLAREDLSGTLYFEVLN---- 178 (420)
T ss_dssp HH--CHHHHTSHHHHHHHTTCCHH----HHHHHHHHHHHHTTCCCEEEEEC-SHHHHHHHHTCTTCCEEEEEEECB----
T ss_pred cc--CCHHHHHHHhhhhhhhccCH----HHHHHHHHHHHhcCcEEEEEccC-CHHHHHHHHHhcCcEEEEEeeecC----
Confidence 32 34556665544332212211 33344667899999999999863 233222235556777765544332
Q ss_pred CCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhh
Q 015784 177 LPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDT 256 (400)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~ 256 (400)
+++.+ ....+.+..+.++.+.....+.+++.+.++.....+++.+.++++.|++.|+++++|+.++..+.+...+.
T Consensus 179 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~ 254 (420)
T 2imr_A 179 PFPDK----ADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTG 254 (420)
T ss_dssp CCGGG----HHHHHHHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHHS
T ss_pred CCchh----hHHHHHHHHHHHHHHhcccCCceEEEecCCcCCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHh
Confidence 11111 12233445555666555444567887888877788999999999999999999999998887655555443
Q ss_pred cCC------------------------CCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-c
Q 015784 257 RKV------------------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-L 311 (400)
Q Consensus 257 ~~~------------------------~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~ 311 (400)
++. +...++.+...++++.+.++.|+.++++++++++++.|+.+++||.++..+ .
T Consensus 255 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~H~~~l~~~~i~~l~~~g~~~~~~p~~~~~~~~ 334 (420)
T 2imr_A 255 GGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVARAGCAVVTCPRSNHHLEC 334 (420)
T ss_dssp CSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGCCEEEECCSCCHHHHHHHHHHTCCEEECHHHHHHTTC
T ss_pred hccccccccccchhhhhhhhccccccCCCCHHHHHHHcCCCCCCeEEEecCcCCHHHHHHHHHcCCeEEECHHHHHHhcc
Confidence 321 234677888888888888999999999999999999999999999988776 6
Q ss_pred CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCc
Q 015784 312 GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDI 391 (400)
Q Consensus 312 ~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~ 391 (400)
+.+|+++++++|+++++|||+++++...+++.+++.+... ..+++++++|+++|.|||++||+++++
T Consensus 335 ~~~~l~~~~~~Gv~~~lgtD~~~~~~~~~~~~~~~~~~~~-------------~~~ls~~~al~~aT~n~A~~lgl~~~~ 401 (420)
T 2imr_A 335 GTFDWPAFAAAGVEVALGTDSVASGETLNVREEVTFARQL-------------YPGLDPRVLVRAAVKGGQRVVGGRTPF 401 (420)
T ss_dssp CCCCHHHHHHTTCCEEECCCCHHHHSCSCTHHHHHHHHHH-------------CTTSCHHHHHHHHHHHHHHHHC--CCC
T ss_pred CCCCHHHHHHCCCeEEEECCCCccCCCCCHHHHHHHHHhc-------------CCCCCHHHHHHHHHHHHHHHhCCCCCc
Confidence 7899999999999999999996543456789888886422 125999999999999999999999888
Q ss_pred cccccCcCC
Q 015784 392 GSLEAGKKV 400 (400)
Q Consensus 392 G~i~~G~~A 400 (400)
|+|++||+|
T Consensus 402 GsL~~Gk~A 410 (420)
T 2imr_A 402 LRRGETWQE 410 (420)
T ss_dssp CSTTSBCCG
T ss_pred eeeCCCCcc
Confidence 999999987
|
| >1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=317.08 Aligned_cols=332 Identities=29% Similarity=0.475 Sum_probs=254.6
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|+++++.. ..+++|+|+||+|++|++.. .+.+ ||++|++|+|||||+|+|+.....++...+
T Consensus 1 ~li~n~~v~~~~~~~--~~~~~v~I~~g~I~~vg~~~--------~~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~ 69 (406)
T 1p1m_A 1 MIIGNCLILKDFSSE--PFWGAVEIENGTIKRVLQGE--------VKVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAED 69 (406)
T ss_dssp CEEEEEEECCSTTSC--CEEEEEEEETTEEEEEEESS--------CCCS-EECTTEEEEECEEEEEECGGGGGGTTSSCS
T ss_pred CEEEccEEEecCccc--cccceEEEECCEEEEeeCCC--------Ccce-ecCCCcEEeecccchhhccchhhhccccCC
Confidence 479999999875432 46789999999999999752 1346 999999999999999999988777776667
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (400)
.++.+|+....|+.....++++.+......+..+++.|+|++.+++ ...+...+...+.+++.......+..+.
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~g~r~~~~~~~~~~~~----- 143 (406)
T 1p1m_A 70 LSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMY-FHEEWIAKAVRDFGMRALLTRGLVDSNG----- 143 (406)
T ss_dssp CCHHHHHHTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEE-SSHHHHHHHHHHHCCEEEEEEEECCBTT-----
T ss_pred CCHHHHHHhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEech-hCHHHHHHHHHHcCCEEEEEcccccCCC-----
Confidence 7889999998888888888888888877788889999999999976 3456666777778888876554443210
Q ss_pred cccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh--hcC
Q 015784 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD--TRK 258 (400)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~--~~~ 258 (400)
.....+....+.++.+.... +.++....++..+..+++.+.++++.|++.|+++++|+.++....+...+ .++
T Consensus 144 ----~~~~~~~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~g 218 (406)
T 1p1m_A 144 ----DDGGRLEENLKLYNEWNGFE-GRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLEDILNIG 218 (406)
T ss_dssp ----BCTTHHHHHHHHHHHHTTGG-GTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEEEEESCSTTCCCCTHHHHTTT
T ss_pred ----CHHHHHHHHHHHHHHhhCCC-CcEEEEEecCccCcCCHHHHHHHHHHHHHCCCcEEEEcCCCchHHHHHHHhhhCC
Confidence 11233444445555554322 45777677777778899999999999999999999999876543332222 111
Q ss_pred CCCChHHHHhHhCCCCCCeeeEEec---CCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCC
Q 015784 259 VDHGTVTFLDKIEFLQNNLLSAHTV---WVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAP 334 (400)
Q Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~h~~---~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~ 334 (400)
+...++.+ .++.|+. +++++++++++ .+||.+++++ .+..++++++++|+++++|||+++
T Consensus 219 --------~~~~g~~~--~~~~H~~~~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~~~~~~~Gv~~~lgtD~~~ 282 (406)
T 1p1m_A 219 --------LKEVKTIA--AHCVHLPERYFGVLKDIPFFV------SHNPASNLKLGNGIAPVQRMIEHGMKVTLGTDGAA 282 (406)
T ss_dssp --------TTTSCEEE--EECTTCCGGGTTTTTTSSEEE------EECHHHHHHTTCCCCCHHHHHHTTCEEEECCCCTT
T ss_pred --------HhHcCcce--eEeeeccCcccCCHHHHHHHH------HhCcHHHhhcCCCcCcHHHHHhCCCeEEEECCCCc
Confidence 12233332 5788999 99988876654 7899888777 677899999999999999999987
Q ss_pred CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 335 SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++..+++.+++.+..+.+.. ...+++++++++++|.|||+++|+++ |+|++||.|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~--------~~~~ls~~~al~~~T~~~A~~lgl~~--G~l~~G~~A 338 (406)
T 1p1m_A 283 SNNSLNLFFEMRLASLLQKAQ--------NPRNLDVNTCLKMVTYDGAQAMGFKS--GKIEEGWNA 338 (406)
T ss_dssp TTSCCCHHHHHHHHHHHHHTT--------CTTSSCHHHHHHHHTHHHHHHHTCSC--SSCCTTSBC
T ss_pred CCCCCCHHHHHHHHHHHhccc--------CCCCCCHHHHHHHHHHHHHHHhCCCC--cccCCCCcc
Confidence 655678999998877665421 13469999999999999999999975 999999987
|
| >3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-39 Score=312.35 Aligned_cols=377 Identities=29% Similarity=0.502 Sum_probs=275.1
Q ss_pred CCCCCCCCCcccEEEEecEE-EeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCc
Q 015784 9 GSSSGSLGSSSTMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87 (400)
Q Consensus 9 ~~~~~~~~~~~~~li~n~~i-~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~ 87 (400)
.+++.+..++.++||+|++| +|+|+..+++++++|+|+||||++||+..+++ ..+.+|||++|++|+|||||+|+
T Consensus 19 ~ap~~~~~~p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~----~~~~~vIDa~G~~v~PG~ID~H~ 94 (479)
T 3hpa_A 19 RAPNTSSSRPKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELP----ETADEVLDLRGHLVIPGLVNTHH 94 (479)
T ss_dssp ----------CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSC----SCCSEEEECTTEEEEECEEECCC
T ss_pred cCCCCCCCCCCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCC----CCCCeEEECCCCEEeeCceeHhh
Confidence 34444555677999999985 57777778899999999999999999876643 34679999999999999999999
Q ss_pred CCccccccccc--CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-----cCCHHHHHHHHHHc
Q 015784 88 HTSQQLAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-----GQHVSEMAKAVELL 160 (400)
Q Consensus 88 H~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-----~~~~~~~~~~~~~~ 160 (400)
|+.++..++.. .+.++.+|+... ++.......++.+......+.+++..|+|++.+.. ........+.+...
T Consensus 95 H~~~~~~~g~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (479)
T 3hpa_A 95 HMYQSLTRAVPAAQNAELFGWLTNL-YKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIYPNGSRLDDSIGAAQRI 173 (479)
T ss_dssp CGGGGGSCSCTTTTTCCHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCCCTTCCHHHHHHHHHHH
T ss_pred CcchhcccccccCCCcchHHHHhhh-hhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeeccchhhHHHHHHHHHHh
Confidence 99988887754 456777887653 23445566677677777778889999999999854 23456677778888
Q ss_pred CCeEEEecccccCCCC---CCcccccCCchHHHHHHHHHHHHhccC-CCCCeEEEeeccccccCCHHHHHHHHHHHHHcC
Q 015784 161 GLRACLVQSTMDCGEG---LPASWAVRTTDDCIQSQKELYAKHHHA-ADGRIRIWFGIRQIMNATDRLLLETRDMAREFK 236 (400)
Q Consensus 161 g~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~ 236 (400)
+++..........+.. ..................+....+... ..........++.....+.+.+.++...+.+.+
T Consensus 174 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~g 253 (479)
T 3hpa_A 174 GMRFHASRGAMSVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPCSPFSVSRDLMRDAAVLAREYG 253 (479)
T ss_dssp TCEEEEEEEECC----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEESCTTTSCHHHHHHHHHHHHHHT
T ss_pred cchhhhhhheeeccccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEecccccccCCHHHHHHHHHHHHhcC
Confidence 8887655443332211 111111111222333344444444332 233455566777788889999999999999999
Q ss_pred CeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCccc
Q 015784 237 TGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAP 315 (400)
Q Consensus 237 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~ 315 (400)
+++.+|+.+...+........+. ..+++....+....+..+.|+.++.+.+++++++.+..+..+|.++... .+..+
T Consensus 254 ~~~~~h~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 331 (479)
T 3hpa_A 254 VSLHTHLAENVNDIAYSREKFGM--TPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFARTGTGVAHCPCSNMRLASGIAP 331 (479)
T ss_dssp CEEEEEESCSHHHHHC---------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCCCC
T ss_pred CeEEeecccchHHHHHHHHHcCC--chHHHHhhhccccccceeeeeEecchhHHHHHHhcCCceeeccccccccccCccc
Confidence 99999998877665555444443 3778888889999999999999999999999999999999999988776 78889
Q ss_pred HHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccc
Q 015784 316 IKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395 (400)
Q Consensus 316 ~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~ 395 (400)
.+.+.+.|+++++|||...+++....+.+++.+..+.... ..+.++|++++|+++|.|||++||+++ +|+|+
T Consensus 332 ~~~~~~~~~~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~ls~~eal~~~T~~~A~~lgl~~-~G~I~ 403 (479)
T 3hpa_A 332 VKKMRLAGVPVGLGVDGSASNDGAQMVAEVRQALLLQRVG-------FGPDAMTAREALEIATLGGAKVLNRDD-IGALK 403 (479)
T ss_dssp HHHHHHHTCCEEECCCCTTSSCCCCHHHHHHHHHHHHHHH-------HCTTSCCHHHHHHHTTHHHHHHHTCSS-SSSCS
T ss_pred hhHHHhcCCcEEeeccccccCCCccHHHHHHHHHHHHhhh-------ccccCCCHHHHHHHHHHHHHHHhCCCC-CccCC
Confidence 9999999999999999987767777887776655443221 134569999999999999999999975 79999
Q ss_pred cCcCC
Q 015784 396 AGKKV 400 (400)
Q Consensus 396 ~G~~A 400 (400)
+||+|
T Consensus 404 ~G~~A 408 (479)
T 3hpa_A 404 PGMAA 408 (479)
T ss_dssp TTSBC
T ss_pred CCCcC
Confidence 99997
|
| >1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-40 Score=308.25 Aligned_cols=340 Identities=14% Similarity=0.158 Sum_probs=237.5
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+++++|+|++|++++ .+++|+|+||+|++||+..+.+ ..+.++||++|++|+|||||+|+|+.....++.
T Consensus 7 ~~~~li~n~~v~~~~------~~~~v~I~~g~I~~vg~~~~~~----~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~ 76 (430)
T 1ra0_A 7 NALQTIINARLPGEE------GLWQIHLQDGKISAIDAQSGVM----PITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQ 76 (430)
T ss_dssp -CCCEEEEEBCTTCC------SEEEEEEETTEEEEEEEESSCC----CCCTTEEECTTCEEESCEEEEEECTTTTTCTTS
T ss_pred CCcEEEEeeEecCCC------ceeEEEEECCEEEEeecCCCCC----CCCcceEccCCCEecccccccccchhhhhhcCC
Confidence 457899999999743 4679999999999999754321 134689999999999999999999987665554
Q ss_pred cC---CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-C-----HHHHHHHHHHcCCeEEEec
Q 015784 98 AD---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-H-----VSEMAKAVELLGLRACLVQ 168 (400)
Q Consensus 98 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~-----~~~~~~~~~~~g~~~~~~~ 168 (400)
.. +.++.+|+.. +++....+++++.+......+..++++|||++.+++.. . .+...+.............
T Consensus 77 ~~~~~~~~~~~~l~~-~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (430)
T 1ra0_A 77 PNWNQSGTLFEGIER-WAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQI 155 (430)
T ss_dssp SSCCSSCCHHHHHHH-HHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTCHHHHHHHHHHHHHTTTCEEEE
T ss_pred CcCCCCCCHHHHHHH-hHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChHHHHHHHHHHHHHhhhhhEEEEE
Confidence 43 5678888865 35555667888888888888899999999999986522 1 2333333222222211111
Q ss_pred ccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeecccccc--CCHHHHHHHHHHHHHcCCeeeEecCCC
Q 015784 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMN--ATDRLLLETRDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~e~l~~~~~~a~~~~~~v~~H~~~~ 246 (400)
..+... ..+. .....+. ++.+...+.+.+. ..++..+. .+++.+.++++.|++.|+++.+|+.+.
T Consensus 156 ~~~~~~----~~~~---~~~~~~~----~~~~~~~g~~~~~--~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~ 222 (430)
T 1ra0_A 156 VAFPQE----GILS---YPNGEAL----LEEALRLGADVVG--AIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEI 222 (430)
T ss_dssp EEECTT----CSSS---STTHHHH----HHHHHHTTCSEEC--CCGGGSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCS
T ss_pred EecCCc----cccc---CchHHHH----HHHHHHhCCCeEe--eeecccccccccHHHHHHHHHHHHHcCCCEEEEECCC
Confidence 001100 0000 1111111 2222222222222 12444444 678899999999999999999999876
Q ss_pred chhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChh-------HHHHHHhcCCeEEECccccccc---------
Q 015784 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHT-------EIGLLSRAGVKVSHCPASAMRM--------- 310 (400)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~-------~i~~~~~~~~~~~~~p~~~~~~--------- 310 (400)
........+ ..++.+...+. +.+..+.|+.+++++ +++++++.|+.+++||.+++.+
T Consensus 223 ~~~~~~~~~------~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv~v~~~p~~~~~~~~~~~~~p~ 295 (430)
T 1ra0_A 223 DDEQSRFVE------TVAALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYPK 295 (430)
T ss_dssp SCTTCCHHH------HHHHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHHHHHHHTTTTCCSSC
T ss_pred CchhHHHHH------HHHHHHHHhCC-CCCEEEEeccccccCChHhHHHHHHHHHHcCCEEEECchhhhhhccccCCCCC
Confidence 543322221 13456667775 778899999998875 8999999999999999877544
Q ss_pred -cCcccHHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 311 -LGFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 311 -~~~~~~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
.+..++++++++|+++++|||++. +....+++.+++.+....+.. .+++++++|+++|.|||+++
T Consensus 296 ~~~~~~~~~~~~~Gv~~~lgTD~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~al~~~T~~~A~~l 365 (430)
T 1ra0_A 296 RRGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQLM----------GYGQINDGLNLITHHSARTL 365 (430)
T ss_dssp CCCCCCHHHHHHTTCCEEECCBCSSBTTBSCCCCCHHHHHHHHHHHTTCC----------SHHHHHGGGGGGTHHHHHHT
T ss_pred cCCCCCHHHHHHCCCEEEEeCCCCcccCCCCCCCCHHHHHHHHHHHHccC----------CcccHHHHHHHHHHHHHHHh
Confidence 256789999999999999999974 334568999998877554311 12589999999999999999
Q ss_pred CCCCCccccccCcCC
Q 015784 386 LWDNDIGSLEAGKKV 400 (400)
Q Consensus 386 g~~~~~G~i~~G~~A 400 (400)
|+++ |+|++||.|
T Consensus 366 g~~~--G~i~~G~~A 378 (430)
T 1ra0_A 366 NLQD--YGIAAGNSA 378 (430)
T ss_dssp TCSS--CSSCTTSBC
T ss_pred CCCC--cccCCCCcC
Confidence 9986 999999987
|
| >2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-37 Score=289.71 Aligned_cols=338 Identities=21% Similarity=0.257 Sum_probs=221.6
Q ss_pred ccEEEEe-cEEEeecCCC----------ceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCc
Q 015784 19 STMILHN-AVIVTMDKES----------RVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87 (400)
Q Consensus 19 ~~~li~n-~~i~~~~~~~----------~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~ 87 (400)
++++|+| ++|+|+++.. ..+++++|+|+||||++||+..+ ....+ ..++||++|++|+|||||+|+
T Consensus 5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~~~~~--~~~viD~~G~~v~PGfID~H~ 81 (421)
T 2bb0_A 5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGA-EAGYE--ADEIIDCSGRLVTPGLVDPHT 81 (421)
T ss_dssp EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTT-TTTCE--EEEEEECTTCEEEECEEECCB
T ss_pred ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEecccc-cccCC--CCeEEeCCCCEeccCeeccCc
Confidence 5789999 9999876432 34568899999999999997531 00011 257999999999999999999
Q ss_pred CCcccccccccCCCChhHhhhhccc-----------c---ccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--CCHH
Q 015784 88 HTSQQLAKGIADDVDLMTWLHDRIW-----------P---YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHVS 151 (400)
Q Consensus 88 H~~~~~~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--~~~~ 151 (400)
|+.....+. ..+..|+.+..| . .....+.++.+......+..+++.|+|++.++.. ....
T Consensus 82 H~~~~~~~~----~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~ 157 (421)
T 2bb0_A 82 HLVFGGSRE----KEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKE 157 (421)
T ss_dssp CCCCCSCCG----GGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSHH
T ss_pred Cccccccch----HHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCcc
Confidence 996543221 112223221110 0 0012345555555556778899999999998531 1211
Q ss_pred ---HHHHH----HHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCC-CCCeEEEeeccccccCCHH
Q 015784 152 ---EMAKA----VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA-DGRIRIWFGIRQIMNATDR 223 (400)
Q Consensus 152 ---~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~e 223 (400)
...+. ....+++....... ...++..+.. .....++.....+..+...+ ...++. .......+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~e 230 (421)
T 2bb0_A 158 TELKQLRVAKKLHESQPVDLVSTFMG---AHAIPPEYQN-DPDDFLDQMLSLLPEIKEQELASFADI---FTETGVFTVS 230 (421)
T ss_dssp HHHHHHHHHHHHHHHSSSEEEEEEEE---ESSCCGGGTT-CHHHHHHHHHTTHHHHHHTTCCSEEEE---BBCTTSBCHH
T ss_pred chHHHHHHHHHHHhhcCceEEEEeec---cccCChhhcc-cHHHHHHHHHHhhHHhhccCccccccc---cCCcCCCCHH
Confidence 12222 23345554321110 0011222111 11222222211222222111 111221 1222345789
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEEC
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~ 303 (400)
.+.++++.|++.|+++.+|+.+... ...++.+...+. ..++|+.++++++++++++.|+.+++|
T Consensus 231 ~l~~~~~~a~~~g~~v~~H~~~~~~------------~~~~~~~~~~g~----~~~~H~~~~~~~~i~~~~~~g~~~~~~ 294 (421)
T 2bb0_A 231 QSRRYLQKAAEAGFGLKIHADEIDP------------LGGAELAGKLKA----VSADHLVGTSDEGIKKLAEAGTIAVLL 294 (421)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSSSC------------CSHHHHHHHTTC----SEEEECTTCCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHCCCCEEEEeccccc------------cCHHHHHHHcCC----cEEhhhhcCCHHHHHHHHHcCCeEEEC
Confidence 9999999999999999999875432 013444444442 457999999999999999999999999
Q ss_pred ccccccc--cCcccHHHHHHcCCcEEEcCCCCC-CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHH
Q 015784 304 PASAMRM--LGFAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 380 (400)
Q Consensus 304 p~~~~~~--~~~~~~~~~~~~Gv~v~~gtD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~ 380 (400)
|.+++.+ .+..|++.++++|+++++|||+++ +++..+++.+++.+.... ++|++|+|+++|.|
T Consensus 295 p~~~~~l~~~~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~~~~~~~~~~~~~~--------------~ls~~eal~~~T~~ 360 (421)
T 2bb0_A 295 PGTTFYLGKSTYARARAMIDEGVCVSLATDFNPGSSPTENIQLIMSIAALHL--------------KMTAEEIWHAVTVN 360 (421)
T ss_dssp HHHHHHTTCCCCCCHHHHHHTTCCEEECCCBBTTTBCCCCHHHHHHHHHHHS--------------CCCHHHHHHHTTHH
T ss_pred CchhhhhcccccchHHHHHHCCCeEEEeCCCCCCCCcccCHHHHHHHHhccc--------------CCCHHHHHHHHHHH
Confidence 9988765 467899999999999999999865 334568998888765332 49999999999999
Q ss_pred HHHHcCCCCCccccccCcCC
Q 015784 381 GAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 381 ~A~~lg~~~~~G~i~~G~~A 400 (400)
||+++|+++++|+|++||+|
T Consensus 361 ~A~~lg~~~~~Gsl~~Gk~A 380 (421)
T 2bb0_A 361 AAYAIGKGEEAGQLKAGRSA 380 (421)
T ss_dssp HHHHTTCTTTSSCCSTTSBC
T ss_pred HHHHhCccCCccccCCCCcC
Confidence 99999999889999999997
|
| >3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=298.70 Aligned_cols=325 Identities=18% Similarity=0.189 Sum_probs=222.2
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
++++++|+|++|+++++ ..++++++|+|+||+|++|++... +..+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~~~~i~n~~v~~~~~-~~~~~~~~v~I~~g~I~~vg~~~~-----~~~~~~viD~~G~~v~PGlID~H~H~~~~~~-- 73 (423)
T 3feq_A 2 SLTITVLQGGNVLDLER-GVLLEHHHVVIDGERIVEVTDRPV-----DLPNAQAIDVRGKTVMPGFIDCHVHVLASNA-- 73 (423)
T ss_dssp --CEEEEEEEEEEETTT-TEEEEEEEEEEETTEEEEEECSCC-----CCSSCEEEECTTCEEEECEEEEEECTTCCSS--
T ss_pred cceEEEEEccEEEeCCC-CcccCCceEEEECCEEEEecCCCC-----CCCCCeEEeCCCCEECCCeeeeEeeecccCC--
Confidence 35678999999998754 356778999999999999998532 1246799999999999999999999976322
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHH---cCCeEEEecccccC
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL---LGLRACLVQSTMDC 173 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~ 173 (400)
++. .....++++.+......+..++++|||++.+++.... ...+..+. .|.|.+.....+..
T Consensus 74 -----~~~---------~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~~~~~~~~g~r~~~~g~~~~~ 138 (423)
T 3feq_A 74 -----NLG---------VNATQPNILAAIRSLPILDAMLSRGFTSVRDAGGADW-SLMQAVETGLVSGPRIFPSGKALSQ 138 (423)
T ss_dssp -----CHH---------HHHHSCHHHHHHTHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCSCEEECCCSEEEC
T ss_pred -----Chh---------hhhcCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCccccc
Confidence 110 0122344555666666778899999999999875443 33333322 35666554433332
Q ss_pred CCCCCcccc-------------c---CCchHHHHHHHHHHHHhccCCCCCeEEEee--------ccccccCCHHHHHHHH
Q 015784 174 GEGLPASWA-------------V---RTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLLETR 229 (400)
Q Consensus 174 ~~~~~~~~~-------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~e~l~~~~ 229 (400)
..+...... . ........+..+.+++....+...++++.. ++.....+++.+.+++
T Consensus 139 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~ 218 (423)
T 3feq_A 139 TGGHGDFRPRGDLLEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIV 218 (423)
T ss_dssp TTSTTCCCCC---CCCCCSSCCTTCSEEECCSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHH
T ss_pred CCCCccccccccccccccccccccccceecCCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHH
Confidence 111110000 0 000112233334444444445567887653 4455688999999999
Q ss_pred HHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEE--------
Q 015784 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS-------- 301 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~-------- 301 (400)
+.|+++|+++.+|+.+... ++...+.+. ..++|+..+++++++++++.|+.++
T Consensus 219 ~~A~~~g~~v~~H~~~~~~---------------i~~~l~~g~----~~i~H~~~~~~~~~~~l~~~gv~~~pt~~~~~~ 279 (423)
T 3feq_A 219 DEAEAANTYVMAHAYTGRA---------------IARAVRCGV----RTIEHGNLVDEAAAKLMHEHGAFVVPTLVTYDA 279 (423)
T ss_dssp HHHHHTTCCEEEEEEEHHH---------------HHHHHHHTC----CEEEEEEECCHHHHHHHHHHTCEEECCTHHHHH
T ss_pred HHHHHCCCeEEEEeCChHH---------------HHHHHHcCC----CEEeccCcCCHHHHHHHHHCCCccccchHHHHH
Confidence 9999999999999974332 211122332 4689999999999999999999884
Q ss_pred ---------ECccccccc-----cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCC
Q 015784 302 ---------HCPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAA 367 (400)
Q Consensus 302 ---------~~p~~~~~~-----~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (400)
++|.++.++ ....++++++++|+++++|||++.. .......+++... . .
T Consensus 280 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~~~-~~~~~~~e~~~~~---------------~-~ 342 (423)
T 3feq_A 280 LAKHGAEFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLLGE-MHAFQSGEFRIRA---------------E-V 342 (423)
T ss_dssp HHHHTGGGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCCGG-GGGGTTHHHHHHH---------------T-T
T ss_pred HHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCC-CCcchHHHHHHHH---------------h-h
Confidence 345444433 1456889999999999999999743 1123445555431 1 2
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 368 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 368 l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++++|+|+++|.|||++||+++++|+|++||.|
T Consensus 343 ls~~eal~~aT~~~A~~lg~~~~~G~i~~G~~A 375 (423)
T 3feq_A 343 LGNLEALRSATTVAAEIVNMQGQLGVIAVGAIA 375 (423)
T ss_dssp SCHHHHHHTTTHHHHHHTTCBTTBSSCCTTSBC
T ss_pred CCHHHHHHHHHHHHHHHhCCCCCceeECCCCcC
Confidence 899999999999999999999989999999987
|
| >2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-37 Score=289.18 Aligned_cols=343 Identities=19% Similarity=0.245 Sum_probs=221.6
Q ss_pred CcccEEEEecEEEeecCC---CceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccc
Q 015784 17 SSSTMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQL 93 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~---~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~ 93 (400)
++.+++|+|++|+|+++. ...+++++|+|+||||++||+..+++...+ ...++||++|++|+|||||+|+|+....
T Consensus 13 ~~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~-~~~~viD~~G~~v~PG~ID~H~H~~~~~ 91 (419)
T 2puz_A 13 GNATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLS-TADETTDCGGRWITPALIDCHTHLVFGG 91 (419)
T ss_dssp --CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGS-CCSEEEECTTCEEEECEEECCCCCCCSS
T ss_pred CCCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhcc-CCCeEEeCCCCEeCcCceecccCccchh
Confidence 446899999999987653 355678899999999999998654322111 1358999999999999999999996532
Q ss_pred cccccCCCChhHhhhhccc-----------c---ccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--CCH---HHHH
Q 015784 94 AKGIADDVDLMTWLHDRIW-----------P---YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHV---SEMA 154 (400)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--~~~---~~~~ 154 (400)
.+. ..+..|+....+ . .....+.++.+......+..+++.|+|++.+++. ... ....
T Consensus 92 ~~~----~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~ 167 (419)
T 2puz_A 92 NRA----MEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYGLDIETELKML 167 (419)
T ss_dssp CCH----HHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSCCSHHHHHHHH
T ss_pred hhH----HHHHHHhcCCCHHHHHhcCCCeecchhhhccCCHHHHHHHHHHHHHHHHhcCCeEEEeCCCCCCCchhHHHHH
Confidence 211 001111111000 0 0012344555555556678899999999988531 121 1223
Q ss_pred HHHHH----cCCeEEEecccccCCCCCCcccccCCchHHHHHH-HHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHH
Q 015784 155 KAVEL----LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETR 229 (400)
Q Consensus 155 ~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~ 229 (400)
+.... .+++..... . ....++..+.. .....+... .+.++.+... +..............+++.+.+++
T Consensus 168 ~~~~~~~~~~~~r~~~~~--~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 241 (419)
T 2puz_A 168 RVARRLETLRPVRIVTSY--L-AAHATPADYKG-RNADYITDVVLPGLEKAHAE--GLADAVDGFCEGIAFSVKEIDRVF 241 (419)
T ss_dssp HHHHHHTTTSSCEEEEEE--C-CTTCCCGGGTT-CHHHHHHHTHHHHHHHHHHT--TCCSEECCEESTTSBCHHHHHHHH
T ss_pred HHHHHHhhhcCceEEEEe--c-ccccCchhhcc-cHHHHHHHHHhhhhhhhhhc--ccccccccccCCCCcCHHHHHHHH
Confidence 33333 234432211 0 01111222111 112222211 1223333221 111111111122355788999999
Q ss_pred HHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECcccccc
Q 015784 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMR 309 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~ 309 (400)
+.+++.|+++.+|+.+... ...++.+...+. ..++|+.++++++++++++.|+.+++||.+++.
T Consensus 242 ~~a~~~g~~v~~H~~~~~~------------~~~~~~~~~~g~----~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~ 305 (419)
T 2puz_A 242 AAAQQRGLPVKLHAEQLSN------------LGGAELAASYNA----LSADHLEYLDETGAKALAKAGTVAVLLPGAFYA 305 (419)
T ss_dssp HHHHHTTCCBEEEESSSSC------------CSHHHHHHHTTC----SEEEECTTCCHHHHHHHHHHTCEEEECHHHHHH
T ss_pred HHHHHCCCcEEEEeccccc------------CCHHHHHHhcCC----ceehHhccCCHHHHHHHHHcCCcEEECCchhhh
Confidence 9999999999999976432 113444444443 457899999999999999999999999998765
Q ss_pred c--cCcccHHHHHHcCCcEEEcCCCCCC-CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 310 M--LGFAPIKEMLHADICVSLGTDGAPS-NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 310 ~--~~~~~~~~~~~~Gv~v~~gtD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
+ .+..|++.++++|+++++|||+++. ++..+++.+++.+.... ++|++++|+++|.|||+++|
T Consensus 306 l~~~~~~~~~~~~~~Gv~~~lgsD~~~~~~~~~~l~~~~~~~~~~~--------------~ls~~~al~~~T~~~A~~lg 371 (419)
T 2puz_A 306 LREKQLPPVQALRDAGAEIALATDCNPGTSPLTSLLLTMNMGATLF--------------RMTVEECLTATTRNAAKALG 371 (419)
T ss_dssp HTCCCCCCHHHHHHHTCCEEECCCCCSSSCCBCCHHHHHHHHHHHH--------------CCCHHHHHHHTTHHHHHHTT
T ss_pred hcccccccHHHHHHCCCeEEEECCCCCCCCccccHHHHHHHhcccc--------------CCCHHHHHHHHHHHHHHHcC
Confidence 5 4578999999999999999998753 34568888888765333 38999999999999999999
Q ss_pred CCCCccccccCcCC
Q 015784 387 WDNDIGSLEAGKKV 400 (400)
Q Consensus 387 ~~~~~G~i~~G~~A 400 (400)
+++++|+|++||+|
T Consensus 372 ~~~~~Gsi~~Gk~A 385 (419)
T 2puz_A 372 LLAETGTLEAGKSA 385 (419)
T ss_dssp CTTTSSSCCTTSBC
T ss_pred CCCCccccCCCCcC
Confidence 99889999999987
|
| >2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-38 Score=294.99 Aligned_cols=325 Identities=17% Similarity=0.224 Sum_probs=218.7
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
++++++|+|++|+++++ ..++++++|+|+||+|++|++... +..+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~m~~~~i~n~~i~~~~~-~~~~~~~~i~i~~g~I~~i~~~~~-----~~~~~~~iD~~g~~v~PGliD~H~H~~~~~~-- 73 (426)
T 2r8c_A 2 SLTTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPI-----KSSNAHVIDVKGKTIMPGLIDLHVHVVAIEF-- 73 (426)
T ss_dssp --CEEEEEEEEECCTTS-SSCEEEEEEEEESSBEEEEESSCC-----CCSSCEEEECTTCEEEECEEEEEECTTCCSS--
T ss_pred CcccEEEEeeEEEeCCC-CcccCCceEEEECCEEEEEcCCCC-----CCCCCeEEECCCCEEcCCeEeeeeccccccC--
Confidence 45679999999998643 345678899999999999998532 1236799999999999999999999976322
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHH---cCCeEEEecccccC
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL---LGLRACLVQSTMDC 173 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~ 173 (400)
++. .....+.++.+..+...+..++++|||++++++.... ...+.... .|.|.+.....+..
T Consensus 74 -----~~~---------~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~-~l~~~i~~~~~~gpri~~~g~~i~~ 138 (426)
T 2r8c_A 74 -----NLP---------RVATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAGY-PFKQAVESGLVEGPRLFVSGRALSQ 138 (426)
T ss_dssp -----CHH---------HHHHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCCH-HHHHHHHTTSSCCCEEEECCSEEEC
T ss_pred -----Cch---------hhccCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCchH-HHHHHHHcCCCCCCeEEecCCcccC
Confidence 110 0122345556666666778899999999999985543 23233222 45666554433322
Q ss_pred CCCCCccc----------------cc---CCchHHHHHHHHHHHHhccCCCCCeEEEee--------ccccccCCHHHHH
Q 015784 174 GEGLPASW----------------AV---RTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLL 226 (400)
Q Consensus 174 ~~~~~~~~----------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~e~l~ 226 (400)
..+..... .. ........+..+.+++....+...++++.. ++.....+++.++
T Consensus 139 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~ 218 (426)
T 2r8c_A 139 TGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIR 218 (426)
T ss_dssp TTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHH
T ss_pred CCCCcccccccccccccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHH
Confidence 11110000 00 000111222223333332233456777653 4455688999999
Q ss_pred HHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE----
Q 015784 227 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH---- 302 (400)
Q Consensus 227 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~---- 302 (400)
++++.|+++|+++.+|+.+... ++...+.|. ..++|+..+++++++++++.|+.++.
T Consensus 219 ~~~~~A~~~g~~v~~H~~~~~~---------------i~~al~~G~----~~i~H~~~~~~~~~~~~~~~gv~~~pt~~~ 279 (426)
T 2r8c_A 219 AIVAEAQGRGTYVLAHAYTPAA---------------IARAVRCGV----RTIEHGNLIDDETARLVAEHGAYVVPTLVT 279 (426)
T ss_dssp HHHHHHHHTTCCEEEEECSHHH---------------HHHHHHTTC----SEEEECTTCCHHHHHHHHHTTCEEECCTHH
T ss_pred HHHHHHHHcCCEEEEEeCChHH---------------HHHHHHcCC----CEEecCCcCCHHHHHHHHHcCCeEeechHH
Confidence 9999999999999999974432 111122232 45899999999999999999998843
Q ss_pred -------------Cccccccc-----cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCC
Q 015784 303 -------------CPASAMRM-----LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTD 364 (400)
Q Consensus 303 -------------~p~~~~~~-----~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (400)
+|.++.++ ....+++.++++|+++++|||++... ......+++..
T Consensus 280 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~-~~~~~~e~~~~---------------- 342 (426)
T 2r8c_A 280 YDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEA-QRLQSDEFRIL---------------- 342 (426)
T ss_dssp HHHHHHHTTTTTCCHHHHTTSTTTGGGHHHHHHHHHHTTCEECCCCCCCGGG-GGGTTHHHHHH----------------
T ss_pred HHHHhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCCCC-CcchHHHHHHH----------------
Confidence 34443333 23457899999999999999997432 22344555432
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 365 ~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
...++++|+|+++|.|||++||+++++|+|++||.|
T Consensus 343 ~~~l~~~eal~~aT~~~A~~lg~~~~~G~i~~G~~A 378 (426)
T 2r8c_A 343 AEVLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHA 378 (426)
T ss_dssp TTTSCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBC
T ss_pred HhcCCHHHHHHHHHHHHHHHhCCCCCCccCCCCCcC
Confidence 123999999999999999999999989999999987
|
| >2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-37 Score=286.46 Aligned_cols=339 Identities=15% Similarity=0.180 Sum_probs=225.2
Q ss_pred ccEEEEecEEEeecCC---CceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccc
Q 015784 19 STMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~---~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~ 95 (400)
++++|+|++|+|+++. ...+.+++|+|+||||++||+..+++. . .+.++||++|++|+|||||+|+|+.....+
T Consensus 5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~-~--~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 81 (416)
T 2q09_A 5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKG-P--YPAHWQDMKGKLVTPGLIDCHTHLIFAGSR 81 (416)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC-----CCTTSEECTTCEEEECEEEEEECCCCCSCC
T ss_pred ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhccc-c--CCCeEEeCCCCEECCcccccccCcchhhhh
Confidence 4789999999987653 245578899999999999998654321 0 135899999999999999999999764322
Q ss_pred cccCCCChhHhhhhcccc--------------ccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--CCH-------HH
Q 015784 96 GIADDVDLMTWLHDRIWP--------------YESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--QHV-------SE 152 (400)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--~~~-------~~ 152 (400)
. ..+..|+.+..|. .....++++.+......+..+++.|||++.+++. ... +.
T Consensus 82 ~----~~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~ 157 (416)
T 2q09_A 82 A----EEFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRV 157 (416)
T ss_dssp H----HHHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHH
T ss_pred H----HHHHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHH
Confidence 1 0122222211110 0112355555666666778899999999999642 122 11
Q ss_pred HHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHH-HHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHH
Q 015784 153 MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK-ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDM 231 (400)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~ 231 (400)
..+.....+++........ ..++..+.. .....+.... +.++.+... +..............+++.+.++++.
T Consensus 158 ~~~~~~~~~~r~~~~~~~~---~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (416)
T 2q09_A 158 ARRLGEALPIRVKTTLLAA---HAVPPEYRD-DPDSWVETICQEIIPAAAEA--GLADAVDVFCEHIGFSLAQTEQVYLA 231 (416)
T ss_dssp HHHHHHHSSSEEEEEEEEE---TSCCGGGTT-CHHHHHHHHHHTHHHHHHHT--TCCSEEEEBBSTTSBCHHHHHHHHHH
T ss_pred HHHHHhhCCceEEEeeecc---ccCCccccC-CHHHHHHHHHhhhhHHHHhc--ccccccccccCCCcCCHHHHHHHHHH
Confidence 2222344566654321100 011222211 1222222221 233333222 11111112223345688999999999
Q ss_pred HHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-
Q 015784 232 AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM- 310 (400)
Q Consensus 232 a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~- 310 (400)
|++.|+++.+|+.+.... ..++.+...+. ..+.|+.++++++++++++.|+.+++||.+++.+
T Consensus 232 a~~~g~~v~~H~~~~~~~------------~~~~~~~~~g~----~~~~H~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~ 295 (416)
T 2q09_A 232 ADQYGLAVKGHMDQLSNL------------GGSTLAANFGA----LSVDHLEYLDPEGIQALAHRGVVATLLPTAFYFLK 295 (416)
T ss_dssp HHHTTCEEEEEESSSCCC------------SHHHHHHHTTC----SEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTT
T ss_pred HHHCCCcEEEEECCCCch------------HHHHHHHHcCC----CEEeecccCCHHHHHHHHHcCCeEEEcCccHHhhc
Confidence 999999999999765320 13333334432 3579999999999999999999999999988765
Q ss_pred -cCcccHHHHHHcCCcEEEcCCCCCC-CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 311 -LGFAPIKEMLHADICVSLGTDGAPS-NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 311 -~~~~~~~~~~~~Gv~v~~gtD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
.+..|++.++++|+++++|||+++. ++..+++.+++.+.... +++++++|+++|.|||+++|++
T Consensus 296 ~~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~~~~~~~~~~~~--------------~l~~~~al~~~T~~~A~~lg~~ 361 (416)
T 2q09_A 296 ETKLPPVVALRKAGVPMAVSSDINPGTAPIVSLRMAMNMACTLF--------------GLTPVEAMAGVTRHAARALGEQ 361 (416)
T ss_dssp CCCCCCHHHHHHTTCCEEECCCCBTTTBCCCCHHHHHHHHHHHH--------------CCCHHHHHHHTTHHHHHHTTCT
T ss_pred cccccCHHHHHHCCCeEEEecCCCCccCCCCCHHHHHHHHHHHc--------------CCCHHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999998753 23568999888765333 4899999999999999999999
Q ss_pred CCccccccCcCC
Q 015784 389 NDIGSLEAGKKV 400 (400)
Q Consensus 389 ~~~G~i~~G~~A 400 (400)
+++|+|++||.|
T Consensus 362 ~~~G~l~~G~~A 373 (416)
T 2q09_A 362 EQLGQLRVGMLA 373 (416)
T ss_dssp TTSSSCCTTSBC
T ss_pred ccceecCCCCCc
Confidence 888999999987
|
| >2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=284.68 Aligned_cols=334 Identities=17% Similarity=0.172 Sum_probs=223.1
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccc--
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLA-- 94 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~-- 94 (400)
.+.+++|+|++|+++. .. ++|+|+||+|++|++..+. ...++||++|++|+|||||+|+|+..+..
T Consensus 3 ~~~~~li~n~~v~~~~--~~----~~v~I~~g~I~~vg~~~~~------~~~~viD~~G~~v~PGlID~H~H~~~~~~~~ 70 (403)
T 2qt3_A 3 KDFDLIIRNAYLSEKD--SV----YDIGIVGDRIIKIEAKIEG------TVKDEIDAKGNLVSPGFVDAHTHMDKSFTST 70 (403)
T ss_dssp CCEEEEEEEEEETTTT--EE----EEEEEETTEEEEEESSCCS------CEEEEEECTTCBEEECEEEEEECGGGTTTTC
T ss_pred cccceEEEeeEecCCC--ee----EEEEEECCEEEEeecCCCC------CccceEcCCCCEecccceeeeeccchhhccc
Confidence 3468999999999643 11 6999999999999986431 13579999999999999999999987654
Q ss_pred -------cccc--CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---C----CHHHHHHHHH
Q 015784 95 -------KGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---Q----HVSEMAKAVE 158 (400)
Q Consensus 95 -------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~---~----~~~~~~~~~~ 158 (400)
.+.. ...++.+|+... + .. +.++.+......+..++++|+|++.++.. . ..+...+...
T Consensus 71 ~~~~~~~~g~~~~~~~~l~~~~~~~--~--~~-~~~~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~ 145 (403)
T 2qt3_A 71 GERLPKFWSRPYTRDAAIEDGLKYY--K--NA-THEEIKRHVIEHAHMQVLHGTLYTRTHVDVDSVAKTKAVEAVLEAKE 145 (403)
T ss_dssp SSSSCTTCSSCCCHHHHHHHHHHHH--H--HC-CHHHHHHHHHHHHHHHHHTTEEEEEEEEECSTTTTTHHHHHHHHHHH
T ss_pred ccccccccCCCcccCcCHHHHHHHh--h--hc-CHHHHHHHHHHHHHHHHHcCCcEEEEEEcccCccccchHHHHHHHHH
Confidence 1110 011255666542 2 22 67777777777888999999999965421 1 1233333333
Q ss_pred HcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCe
Q 015784 159 LLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 238 (400)
Q Consensus 159 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~ 238 (400)
+.+-..-.....+.... . . .... ..+.++++...+...++ .+.++.....+++.+.++++.|+++|++
T Consensus 146 ~~~~~~~~~~~~~~~~~-----~-~-~~~~----~~~~~~~~~~~g~~~~~-~~~p~~~~~~~~~~l~~~~~~A~~~g~~ 213 (403)
T 2qt3_A 146 ELKDLIDIQVVAFAQSG-----F-F-VDLE----SESLIRKSLDMGCDLVG-GVDPATRENNVEGSLDLCFKLAKEYDVD 213 (403)
T ss_dssp HHTTTCEEEEEEECTTC-----T-T-TSTT----HHHHHHHHHHTTCSEEE-CBCTTTTTSCHHHHHHHHHHHHHHTTCE
T ss_pred HhhcceeEEEEEcCCcc-----c-c-cCcc----hHHHHHHHHhcCCCeEE-EecCCCCCCChHHHHHHHHHHHHHcCCC
Confidence 32211111100111110 0 0 0111 12223333222222222 2345555566678999999999999999
Q ss_pred eeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-------hHHHHHHhcCCeEEECcccccccc
Q 015784 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------TEIGLLSRAGVKVSHCPASAMRML 311 (400)
Q Consensus 239 v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-------~~i~~~~~~~~~~~~~p~~~~~~~ 311 (400)
+++|+.+...+.....+. .++.+...++ +.+..+.|+.++++ ++++++++.|+.+++||... .
T Consensus 214 v~~H~~~~~~~~~~~~~~------~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~~~p~~~---~ 283 (403)
T 2qt3_A 214 IDYHIHDIGTVGVYSINR------LAQKTIENGY-KGRVTTSHAWCFADAPSEWLDEAIPLYKDSGMKFVTCFSST---P 283 (403)
T ss_dssp EEEEECCCHHHHHHHHHH------HHHHHHHTTC-TTSEEEEECTHHHHSCHHHHHHHHHHHHHHTCEEEEETTTC---C
T ss_pred eEEEeCCcccchhHHHHH------HHHHHHHcCC-CCCeEEEehhhhccCChhhHHHHHHHHHHcCCEEEECCCCC---C
Confidence 999998876543221111 3455556665 56789999998775 78999999999999999643 4
Q ss_pred CcccHHHHHHcCCcEEEcCCCCC----CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 312 GFAPIKEMLHADICVSLGTDGAP----SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 312 ~~~~~~~~~~~Gv~v~~gtD~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
+..|+++++++|+++++|||++. ++...+++.+++.+....+. ...++++++|+++|.|||+++|+
T Consensus 284 ~~~~~~~~~~~Gv~v~lgtD~~~~~~~~~g~~~~~~~~~~~~~~~~~----------~~~~~~~~al~~~T~~~A~~lg~ 353 (403)
T 2qt3_A 284 PTMPVIKLLEAGINLGCASDNIRDFWVPFGNGDMVQGALIETQRLEL----------KTNRDLGLIWKMITSEGARVLGI 353 (403)
T ss_dssp TTCCHHHHHHTTCEEEEECCSCSSSSCSCCCCCHHHHHHHHHHHTTC----------CSHHHHHHHHHHTTHHHHHHHTC
T ss_pred CCCCHHHHHHcCCcEEEeCCCCCCCCCCCCCCCHHHHHHHHHHHhCc----------CCccCHHHHHHHHHHHHHHhcCC
Confidence 57899999999999999999862 22235788888776544321 11268999999999999999999
Q ss_pred CCCccccccCcCC
Q 015784 388 DNDIGSLEAGKKV 400 (400)
Q Consensus 388 ~~~~G~i~~G~~A 400 (400)
+++ |+|++||.|
T Consensus 354 ~~~-g~i~~G~~A 365 (403)
T 2qt3_A 354 EKN-YGIEVGKKA 365 (403)
T ss_dssp GGG-CSSSTTSBC
T ss_pred Ccc-cCCCCCCcC
Confidence 875 999999987
|
| >2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-35 Score=279.21 Aligned_cols=326 Identities=17% Similarity=0.180 Sum_probs=215.5
Q ss_pred CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCC--cEEeCCCcEeeecccccCcCCcccc
Q 015784 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMAD--QIIDLQSQILLPGFVNTHVHTSQQL 93 (400)
Q Consensus 16 ~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~--~viD~~g~~v~PG~iD~H~H~~~~~ 93 (400)
+..++++|+|++|+++++. .++++++|+|+||+|++|++.. . + .+. ++||++|++|+|||||+|+|+....
T Consensus 4 ~~~~~~li~n~~v~~~~~~-~~~~~~~v~I~~g~I~~vg~~~-~----~-~~~~~~viD~~g~~v~PGlID~H~H~~~~~ 76 (418)
T 2qs8_A 4 DVDSKTLIHAGKLIDGKSD-QVQSRISIVIDGNIISDIKKGF-I----S-SNDFEDYIDLRDHTVLPGLMDMHVHFGQEY 76 (418)
T ss_dssp ---CCEEEEEEEECCSSCS-SCEEEEEEEEETTEEEEEEESC-C----C-CTTSSEEEEEEEEEEEECEEEEEECTTCCC
T ss_pred CCCccEEEEeeEEEeCCCC-ccccCcEEEEECCEEEEEeCCC-C----C-CCCcceEEECCCCEECCCeeeeeeccccCC
Confidence 4456789999999987543 3567789999999999999753 1 1 246 8999999999999999999997632
Q ss_pred cccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-CHHHHHHHHHHcCC----eEEEec
Q 015784 94 AKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGL----RACLVQ 168 (400)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~~~~~~~~~~~~g~----~~~~~~ 168 (400)
.+..| .. -..++++.+......+..++++|||++.+++.. ......+.+.+.+. +.....
T Consensus 77 --------~~~~~-~~------~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~~~r~~~~~ 141 (418)
T 2qs8_A 77 --------QSKAQ-AP------IKVEREMQAILATQHAYVTFKSGFTTVRQVGDSGLVAISLRDAINSGKLAGPRIFAAG 141 (418)
T ss_dssp --------CCTTT-SC------SCCCHHHHHHHHHHHHHHHHHTTEEEEEECCCSSSHHHHHHHHHHTTSSCCCEEEECC
T ss_pred --------CCCch-hh------hcCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCCccccHHHHHHHHCCCCCCCeEEecC
Confidence 11222 10 123555556666667788999999999998632 33334444555443 554432
Q ss_pred cccc--C-----CCCCCcccccC-----CchHHHHHHHHHHHHhccCCCCCeEEEee-----cc---ccccCCHHHHHHH
Q 015784 169 STMD--C-----GEGLPASWAVR-----TTDDCIQSQKELYAKHHHAADGRIRIWFG-----IR---QIMNATDRLLLET 228 (400)
Q Consensus 169 ~~~~--~-----~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~e~l~~~ 228 (400)
..+. . ++.+.+.+... .......+..+.+++....+...++++.. ++ +....+++.+.++
T Consensus 142 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~ 221 (418)
T 2qs8_A 142 KTIATTGGHADPTNGKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAV 221 (418)
T ss_dssp SCBEETTCTTCTTTTCCGGGCCCCCGGGTEECSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHH
T ss_pred ccccccCCCccccccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHH
Confidence 2211 0 11111111110 01112233334333322223346776532 11 2356789999999
Q ss_pred HHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECcccc-
Q 015784 229 RDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASA- 307 (400)
Q Consensus 229 ~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~- 307 (400)
++.|++.|+++.+|+.+... ++.+...+ ...+.|+.++++++++++++.|+.++ |...
T Consensus 222 ~~~A~~~g~~v~~H~~~~~~---------------i~~~~~~g----~~~i~H~~~~~~~~i~~l~~~gv~v~--p~~~~ 280 (418)
T 2qs8_A 222 VSAAKDYGMWVAVHAHGAEG---------------MKRAIKAG----VDSIEHGTFMDLEAMDLMIENGTYYV--PTISA 280 (418)
T ss_dssp HHHHHHTTCEEEEEECSHHH---------------HHHHHHHT----CSEEEECTTCCHHHHHHHHHHTCEEE--CCHHH
T ss_pred HHHHHHcCCEEEEEECCHHH---------------HHHHHHcC----CCEEEECCCCCHHHHHHHHHCCCEEe--eeech
Confidence 99999999999999964332 11112223 24689999999999999999998754 4421
Q ss_pred -------ccccC-----------------cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCC
Q 015784 308 -------MRMLG-----------------FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTT 363 (400)
Q Consensus 308 -------~~~~~-----------------~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (400)
.+..+ ..+++.++++|+++++|||++. ++..+++.+++.+..
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~gTD~~~-~~~~~~~~e~~~~~~------------- 346 (418)
T 2qs8_A 281 GEFVAEKSKIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGV-QKHGTNWKEFVYMVE------------- 346 (418)
T ss_dssp HHHHHHHTTSTTSSCTTTHHHHHHHHHHHHHHHHHHHHHTCCBCCCCCBTT-BCTTCTTHHHHHHHH-------------
T ss_pred HHHhhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeCCCCc-CCcchHHHHHHHHHH-------------
Confidence 00011 2457889999999999999864 234567788776431
Q ss_pred CCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 364 DPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 364 ~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+++++|+|+++|.|||+++|+++++|+|++||.|
T Consensus 347 --~gls~~eal~~~T~n~A~~lg~~~~~G~l~~G~~A 381 (418)
T 2qs8_A 347 --NGMPAMKAIQSATMETAKLLRIEDKLGSIESGKLA 381 (418)
T ss_dssp --TTCCHHHHHHHTTHHHHHHTTCTTTSSSCCTTSBC
T ss_pred --cCCCHHHHHHHHHHHHHHHhCCCCCCcccCCCCcc
Confidence 25999999999999999999999889999999987
|
| >3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-34 Score=269.89 Aligned_cols=323 Identities=12% Similarity=0.141 Sum_probs=213.8
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+.+++|+|++|+++++. ..++ ++|+|+||+|++|++. . + .+.++||++|++|+|||||+|+|+. ...
T Consensus 4 ~~~~~~i~n~~v~~~~~~-~~~~-~~v~I~~g~I~~ig~~-~-----~-~~~~viD~~g~~v~PGlID~H~H~~-~~~-- 71 (408)
T 3be7_A 4 TSEDFLIKSKGYLDIQTG-EIIK-ADLLIRNGKIAEIGKI-N-----T-KDATVISIPDLILIPGLMDSHVHIV-GND-- 71 (408)
T ss_dssp -CCCEEEEEEEEECTTTC-CEEC-CEEEEETTEEEEEECC-C-----C-SSSEEEEEEEEEEEECEEEEEECCS-SCC--
T ss_pred ccceEEEEeeEEEeCCCC-ceee-eEEEEECCEEEEEeCC-C-----C-CCCeEEECCCCEECcCceeeeEccc-CCC--
Confidence 346799999999986532 3455 8999999999999975 2 1 2468999999999999999999996 210
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-CHHHHHHHHHHcCC----eEEEecccc
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGL----RACLVQSTM 171 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~~~~~~~~~~~~g~----~~~~~~~~~ 171 (400)
...| ... ..++++.+......+..++++||||+.+++.. ......+.+.+.+. +.......+
T Consensus 72 ------~~~~-~~~------~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 138 (408)
T 3be7_A 72 ------SKGE-ESI------ADSSHMGTVWGVVNAEKTLMAGFTTVRNVGAANYADVSVRDAIERGVINGPTMLVSGPAL 138 (408)
T ss_dssp ------CCSG-GGT------TCCTHHHHHHHHHHHHHHHTTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSCB
T ss_pred ------Ccch-hhh------cCCHHHHHHHHHHHHHHHHHcCCCEEEeCCCccccCHHHHHHHHCCCCCCCEEEEcccee
Confidence 1112 110 13455556666667788999999999998742 23334444555554 433322111
Q ss_pred -cCCC-----CCCcccccC--CchHHHHHHHHHHHHhccCCCCCeEEEee-----cc---ccccCCHHHHHHHHHHHHHc
Q 015784 172 -DCGE-----GLPASWAVR--TTDDCIQSQKELYAKHHHAADGRIRIWFG-----IR---QIMNATDRLLLETRDMAREF 235 (400)
Q Consensus 172 -~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~e~l~~~~~~a~~~ 235 (400)
..+. .+...+... ..........+.++.....+...++++.. ++ +....+++.+.++++.|++.
T Consensus 139 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~ 218 (408)
T 3be7_A 139 GITGGHCDHNLLPPEFNYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNH 218 (408)
T ss_dssp BCTTSTTSCCCSCTTTCCCCTTBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT
T ss_pred eccCCCCccccccccccccCCcccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHC
Confidence 1110 111111000 01112333444444433333445666531 11 13567889999999999999
Q ss_pred CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc--c--
Q 015784 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM--L-- 311 (400)
Q Consensus 236 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~--~-- 311 (400)
|+++.+|+.+... ++.+...+. ..+.|+.+++++.++++++.|+.++.++.....+ .
T Consensus 219 g~~v~~H~~~~~~---------------i~~~~~~g~----~~i~H~~~~~~~~i~~~~~~g~~v~~~~~~~~~~~~~~~ 279 (408)
T 3be7_A 219 GMKVAAHAHGLIG---------------IKAAIKAGV----DSVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGA 279 (408)
T ss_dssp TCEEEEEECSHHH---------------HHHHHHHTC----SEEEECTTCCHHHHHHHHHTTCEEECCCSTHHHHHTTTT
T ss_pred CCEEEEEeCCHHH---------------HHHHHHcCC----CEEEECCCCCHHHHHHHHHCCCEEeeeecHHHHhhhhcc
Confidence 9999999976432 222223332 4689999999999999999999887665432110 0
Q ss_pred ------------------CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 015784 312 ------------------GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 312 ------------------~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
...+++.++++|+++++|||+++. +..+++.+++.... .++|++++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~~-p~~~~~~~~~~~~~---------------~gls~~~a 343 (408)
T 3be7_A 280 KAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIF-DHGDNAKQFAYMVE---------------WGMTPLEA 343 (408)
T ss_dssp TTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTB-CTTCGGGHHHHHHH---------------TTCCHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC-CCchHHHHHHHHHH---------------cCCCHHHH
Confidence 125678899999999999998642 33456777765331 25999999
Q ss_pred HHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 374 LRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 374 l~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++++|.|||+++|++ ++|+|++||.|
T Consensus 344 l~~~T~n~A~~lgl~-~~G~i~~G~~A 369 (408)
T 3be7_A 344 IQASTIKTATLFGIE-NIGQIKEGFDA 369 (408)
T ss_dssp HHTTTHHHHHHHTCS-SCSSCCTTSBC
T ss_pred HHHHHHHHHHHhCCC-cccccCCCCcc
Confidence 999999999999998 68999999987
|
| >2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-33 Score=268.77 Aligned_cols=341 Identities=17% Similarity=0.121 Sum_probs=206.0
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEE-eCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFV-VQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v-~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~ 95 (400)
.+.+++|+|++|+++++. ..+++++|+| +||||++|++...... ..+.++||++|++|+|||||+|+|+......
T Consensus 11 ~~~~~li~n~~i~~~~~~-~~~~~~~v~I~~~g~I~~Vg~~~~~~~---~~~~~viD~~G~~v~PG~ID~H~H~~~~~~~ 86 (458)
T 2p9b_A 11 VEPFALAHATIVTGDKAG-TILRNMTIVVGADGRIEQVAPSIETSI---PAEYHYLDGTGKIVMPGLINAHTHLFSQGKP 86 (458)
T ss_dssp CCCEEEEEEEEECCCTTC-CEEEEEEEEECTTSBEEEEEEGGGCCC---CTTCEEEECTTCEEEECEEEEEECSCC----
T ss_pred CCCcEEEEeeEEEeCCCC-ccccCcEEEEecCCEEEEEeccccCCC---CCCCeEEECCCCEEccceeeeeecccccccc
Confidence 345789999999986542 4567789999 9999999997322111 1246899999999999999999999765422
Q ss_pred -cccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-CHHHHHHHHHHcCC----eEEEecc
Q 015784 96 -GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVSEMAKAVELLGL----RACLVQS 169 (400)
Q Consensus 96 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~~~~~~~~~~~~g~----~~~~~~~ 169 (400)
....+.+...|+....|. ..++.++.+......+..++++|||++.+++.. ......+...+.+. +......
T Consensus 87 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~g~r~~~~g~ 164 (458)
T 2p9b_A 87 LNPKLATPKGQRMVATFAH--SPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGP 164 (458)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSSHHHHHHHHHHTTSSCCCEEECCCS
T ss_pred ccccccchhhhhhhhhhhh--hcccccHHHHHHHHHHHHHHHcCCcEEEeCCCCccccHHHHHHHHcCCCCCCeEEeccc
Confidence 111111111111111111 112223333444457788999999999998642 23333444444443 3332211
Q ss_pred ccc-CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEee-----cc-----ccccCCHHHHHHHHHHHHHcCCe
Q 015784 170 TMD-CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG-----IR-----QIMNATDRLLLETRDMAREFKTG 238 (400)
Q Consensus 170 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~-----~~~~~~~e~l~~~~~~a~~~~~~ 238 (400)
.+. .+......+... ........+.++.....+.+.++++.. ++ .....+++.+.++++.|++.|++
T Consensus 165 ~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~ 242 (458)
T 2p9b_A 165 LMAIPEGHGAPLIALT--SGTPEEARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVI 242 (458)
T ss_dssp CEECCCSSCCCCEECC--SCCHHHHHHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCC
T ss_pred ccccCCCCCccccCcc--CCCHHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCe
Confidence 111 110000000000 011122223333333334456776542 11 23467889999999999999999
Q ss_pred eeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHH------hcCCeEEECccc--cc-c
Q 015784 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLS------RAGVKVSHCPAS--AM-R 309 (400)
Q Consensus 239 v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~------~~~~~~~~~p~~--~~-~ 309 (400)
+.+|+.+... ++.....|. ..+.|+.+++++++++++ +.|+.+. |.+ +. .
T Consensus 243 v~~H~~~~~~---------------i~~~~~~G~----~~i~H~~~~~~~~~~~~~~~~~~~~~g~~v~--p~~~~~~~~ 301 (458)
T 2p9b_A 243 VGAHAQSPEG---------------VRRSLLAGV----DTIEHGSVLDDELIGMFRHNPNALRGYSALI--PTLSAGLPL 301 (458)
T ss_dssp EEEEECSHHH---------------HHHHHHHTC----SEEEECCCCCHHHHHHHHCCTTSTTSCCEEE--CCHHHHHHH
T ss_pred EEEEeCCHHH---------------HHHHHHcCC----CEEEECCCCCHHHHHHHhcccccccCCeEEE--eecchhhHH
Confidence 9999964321 111122232 457999999999999999 8998653 444 21 0
Q ss_pred --c--------------------cCcccHHHHHHcCCcEEEcCCCCC-CCCCCCHHHHHHHHHHHhcccccccCCCCCCC
Q 015784 310 --M--------------------LGFAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFANGTTDPA 366 (400)
Q Consensus 310 --~--------------------~~~~~~~~~~~~Gv~v~~gtD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (400)
. ....+++.++++|+++++|||++. +++..+++.+++..... .
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~~~~~~~~~~~~e~~~~~~~--------------~ 367 (458)
T 2p9b_A 302 TLLGQDVTGITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYATWRELELLVAY--------------A 367 (458)
T ss_dssp HHSCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTTSTTSCTTCHHHHHHHHHHH--------------H
T ss_pred HhhhcccccCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCCCCCCccccHHHHHHHHHHh--------------c
Confidence 0 012467889999999999999753 33345677777754321 1
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 367 ALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 367 ~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++|++++|+++|.|||+++|+++++|+|++||.|
T Consensus 368 ~ls~~~al~~~T~~~A~~lgl~~~~Gsi~~Gk~A 401 (458)
T 2p9b_A 368 GFSPAEALHAATAVNASILGVDAETGSLEVGKSA 401 (458)
T ss_dssp CCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBC
T ss_pred CCCHHHHHHHHHHHHHHHhCCcCCCCccCCCCcC
Confidence 4999999999999999999999889999999987
|
| >3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=272.56 Aligned_cols=334 Identities=16% Similarity=0.164 Sum_probs=218.9
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc---
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG--- 96 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~--- 96 (400)
.++|+|++|+|+++... ...+|+|+||||++||+..++.......+.++||++|++|+|||||+|+|+...+...
T Consensus 37 ~~li~ng~I~t~~~~~~--~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~~~g~~~~~~ 114 (534)
T 3icj_A 37 MKALINGTIYTSFSPVK--KVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMSLEMV 114 (534)
T ss_dssp EEEEESSEEEEEETTEE--EESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHHHHHHHHHSE
T ss_pred CEEEECCEEECCCCCCc--eeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhhhhhhhcCcc
Confidence 37999999999876533 4569999999999999876653311012578999999999999999999986533211
Q ss_pred -ccCCCChhH-----------hhhhccccc--------------------------------------------------
Q 015784 97 -IADDVDLMT-----------WLHDRIWPY-------------------------------------------------- 114 (400)
Q Consensus 97 -~~~~~~~~~-----------~~~~~~~~~-------------------------------------------------- 114 (400)
+....+..+ |+.+..|..
T Consensus 115 dl~~~~s~~e~~~~l~~~~~~wi~g~G~~~~~~~~~pt~~~LD~~~~Pv~l~~~~~H~~~~Ns~AL~~~gi~~t~~p~G~ 194 (534)
T 3icj_A 115 DLRGVKSMEELVERVKKGRGRIIFGFGWDQDELGRWPTREDLDVIDRPVFLYRRCFHVAVMNSKMIDLLNLKPSKDFDES 194 (534)
T ss_dssp ECTTCCSHHHHHHHHHTCCSSSEEEEEECHHHHSSCCCHHHHTTSSSCEEEEETTSSEEEECHHHHHHHCCCCCTTEETT
T ss_pred CCCCCCCHHHHHHHHHHHHhhCEEEcccCHHHhcCCCCHHHHhhCCCeEEEEecCCcHhHHhHHHHHHcCCCCCCCCCCC
Confidence 000001000 111111100
Q ss_pred ---------------cCC-C-ChhhHHHHHHHHHHHHHhcCcceeeccCcC--CHHHHHHHHHH--cCCeEEEecccccC
Q 015784 115 ---------------ESN-M-TEEDSYISTLLCGIELIHSGVTCFAEAGGQ--HVSEMAKAVEL--LGLRACLVQSTMDC 173 (400)
Q Consensus 115 ---------------~~~-~-~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--~~~~~~~~~~~--~g~~~~~~~~~~~~ 173 (400)
... . +.++.......+.+.+++.|+|++.+++.. ..+...+..++ ..+|......
T Consensus 195 tG~l~e~A~~~v~~~~p~~~l~~~~~~~~l~~a~~~~~~~GiTsv~d~~~~~~~~~~~~~l~~~g~l~~rv~~~~~---- 270 (534)
T 3icj_A 195 TGIVRERALEESRKIINEKILTVKDYKHYIESAQEHLLSLGVHSVGFMSVGEKALKALFELEREGRLKMNVFAYLS---- 270 (534)
T ss_dssp TTEEEHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTTEEEEEEEEECHHHHHHHHHHHHTTCCCSEEEEEEC----
T ss_pred CceeeHHHHHHHHHhccccCCCHHHHHHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHHHHhCCCCcEEEEEecC----
Confidence 000 2 334433444456788899999999998632 12222222222 3344432210
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCC-----eEEEee-------------------ccccccCCHHHHHHHH
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGR-----IRIWFG-------------------IRQIMNATDRLLLETR 229 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-------------------~~~~~~~~~e~l~~~~ 229 (400)
. ..+....+... ....++. +|++.. ..+...++++.+.+++
T Consensus 271 ------------~-~~~~~~~~~~~--~~~~~~~~~~~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v 335 (534)
T 3icj_A 271 ------------P-ELLDKLEELNL--GKFEGRRLRIWGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVI 335 (534)
T ss_dssp ------------G-GGHHHHHHHTC--CSEECSSEEEEEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHH
T ss_pred ------------H-HHHHHHHHhcc--ccCCCCcEEEEeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHH
Confidence 0 11111111100 1111122 222210 0123357899999999
Q ss_pred HHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccc-
Q 015784 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAM- 308 (400)
Q Consensus 230 ~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~- 308 (400)
+.|++.|+++.+|+.++..... .++.+...+ .++.++|+.++++++++++++.|+.+++||.++.
T Consensus 336 ~~A~~~G~~v~~Ha~gd~ai~~-----------~l~a~~~~~---~r~~ieH~~~~~~e~i~~la~~gv~~~~~P~~~~~ 401 (534)
T 3icj_A 336 ERAKPLGLDVAVHAIGDKAVDV-----------ALDAFEEAE---FSGRIEHASLVRDDQLERIKELKVRISAQPHFIVS 401 (534)
T ss_dssp HHHTTTTCEEEEEECSHHHHHH-----------HHHHHHHHT---CCCEEEECCBCCHHHHHHHHHHTCEEEECTTHHHH
T ss_pred HHHHHCCCEEEEEEcChHHHHH-----------HHHHHHhcc---CCCEEEECCCCCHHHHHHHHHcCCeEEEccccccc
Confidence 9999999999999986554322 233333333 6789999999999999999999999999998753
Q ss_pred ------c-----ccCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 015784 309 ------R-----MLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377 (400)
Q Consensus 309 ------~-----~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~ 377 (400)
+ ..+..|++.|+++ +++++|||++.. ..+++..++.+.... ....++++|++|||+++
T Consensus 402 ~~~~~~~lg~~r~~~~~p~~~l~~~-v~valGSD~p~~--~~~p~~~~~~av~r~--------~~~~~~~ls~~eaL~~~ 470 (534)
T 3icj_A 402 DWWIVNRVGEERAKWAYRLKTLSSI-TKLGFSTDSPIE--PADPWVSIDAAVNRY--------VVDPGERVSREEALHLY 470 (534)
T ss_dssp CTTHHHHHHHHHGGGBTCHHHHHHH-SCEEECCTTTTS--CCCHHHHHHHHHHCC--------SSCGGGCCCHHHHHHHT
T ss_pred hhHHHHhhCHHHHhccHHHHHHHHh-CCEEeecCCCCC--CCCHHHHHHHHHhcc--------ccCcccCCCHHHHHHHH
Confidence 1 1467899999999 999999999754 378998888776431 12245679999999999
Q ss_pred hHHHHHHcCCCCCccccccCcCC
Q 015784 378 TINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 378 T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
|.|+|+++|++ ++|+|++||.|
T Consensus 471 T~~~A~~lg~e-~~GsLe~Gk~A 492 (534)
T 3icj_A 471 THGSAQVTLAE-DLGKLERGFRA 492 (534)
T ss_dssp THHHHHHTTCT-TCSCCSTTSBC
T ss_pred HHHHHHHhCCC-CCeEECCCCCc
Confidence 99999999999 89999999987
|
| >3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-35 Score=273.23 Aligned_cols=331 Identities=19% Similarity=0.224 Sum_probs=207.9
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+++++|+|++|+++++. ..+ ++|+|+||+|++|++..+ +.+.++||++|++|+|||||+|+|+........
T Consensus 4 ~~~~~i~~~~i~~~~~~--~~~-~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~~ 74 (396)
T 3ooq_A 4 SVKILFKNATVFPITSR--PFK-GDVLVSNGKVEKVGENIE------DPDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVG 74 (396)
T ss_dssp --CEEEEEEEECCSSSC--CEE-EEEEEETTEEEEEESCCC------CTTSEEEECTTCEEEECEEEEEECTTTSCTTSC
T ss_pred cceEEEECcEEEeCCCC--eEE-eEEEEECCEEEEecCCCC------CCCCeEEECCCCEEecCEEecccccCccccCcc
Confidence 45789999999986643 444 899999999999998643 135799999999999999999999987544211
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----------------CHHHHHHHHHHcC
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----------------HVSEMAKAVELLG 161 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----------------~~~~~~~~~~~~g 161 (400)
....|+....|+....+...+.+.+....+..++++|||++.++.+. ........ ...+
T Consensus 75 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~gs~~~i~G~~~~~~~~~~~~~~~~~~-~~~~ 149 (396)
T 3ooq_A 75 ----YYYSDGNEATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVPGSANPVGGQGSVIKFRSIIVEECIVK-DPAG 149 (396)
T ss_dssp ----GGGCCSCCTTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECCCSSSSEEEEEEEEESCCSSHHHHEEE-EEEE
T ss_pred ----ccccccccccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccCCCCCcccCeeEEEeccCCCHHHceec-CCcE
Confidence 11356666777777888888777777677788999999999997321 11111000 1111
Q ss_pred CeEEEecccccC-C--CCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCe
Q 015784 162 LRACLVQSTMDC-G--EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTG 238 (400)
Q Consensus 162 ~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~ 238 (400)
++..++...... + ..++. ........+.+..+..+.+..... ......+++..... ..+.++.+.+.+++
T Consensus 150 i~~~~g~~~~~~~~~~~~~p~--~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~----~~e~l~~~~~~~~~ 222 (396)
T 3ooq_A 150 LKMAFGENPKRVYGERKQTPS--TRMGTAGVIRDYFTKVKNYMKKKE-LAQKEGKEFTETDL----KMEVGEMVLRKKIP 222 (396)
T ss_dssp EEEECSHHHHHHHHHTTCSCS--SHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTCCCCCCCH----HHHHHHHHHTTSSC
T ss_pred EEEEcCCCCcccccccCCCCc--cHHHHHHHHHHHHHHHHHHHHhhh-hhhhccCCCCCcCh----hHHHHHHHHcCCCc
Confidence 222211110000 0 00000 000001112222221111111100 00000112222222 23333444588999
Q ss_pred eeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECcc----ccccc--cC
Q 015784 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPA----SAMRM--LG 312 (400)
Q Consensus 239 v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~----~~~~~--~~ 312 (400)
+.+|+.+...... .++.+...+. +..+.|+....+ +++++++.|+.+++||. ++..+ .+
T Consensus 223 v~iHa~~~~~i~~-----------~~~~~~~~g~---~~~i~H~~~~~~-~~~~l~~~gv~v~~~P~~~~~~~~~~~~~~ 287 (396)
T 3ooq_A 223 ARMHAHRADDILT-----------AIRIAEEFGF---NLVIEHGTEAYK-ISKVLAEKKIPVVVGPLLTFRTKLELKDLT 287 (396)
T ss_dssp EEEEECSHHHHHH-----------HHHHHHHHTC---CEEEEECTTGGG-GHHHHHHHTCCEEECCCSSCCCSGGGTTCC
T ss_pred EEEEECchhHHHH-----------HHHHHHHcCC---CEEEecCchHHH-HHHHHHHCCCCEEECcccccccchhHHhhh
Confidence 9999976653211 4455555553 578999998654 69999999999999995 34433 45
Q ss_pred cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 313 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 313 ~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
..|++.++++|+++++|||++.. +...+..++..+. ..+++++++|+++|.|||++||+++++|
T Consensus 288 ~~~~~~l~~~Gv~v~lgtD~~~~-~~~~l~~~~~~~~---------------~~gl~~~~al~~~T~n~A~~lg~~~~~G 351 (396)
T 3ooq_A 288 METIAKLLKDGVLIALMCDHPVI-PLEFATVQAATAM---------------RYGAKEEDLLKILTVNPAKILGLEDRIG 351 (396)
T ss_dssp TTHHHHHHHTTCCEEECCTTTTS-CGGGHHHHHHHGG---------------GGTCCHHHHHHTTTHHHHHHTTCTTTSS
T ss_pred hHHHHHHHHCCCEEEEEcCCCcc-CccHHHHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHhCCCCCee
Confidence 67999999999999999999754 2222333332221 2359999999999999999999999899
Q ss_pred ccccCcCC
Q 015784 393 SLEAGKKV 400 (400)
Q Consensus 393 ~i~~G~~A 400 (400)
+|++||.|
T Consensus 352 ~i~~G~~A 359 (396)
T 3ooq_A 352 SIEPGKDA 359 (396)
T ss_dssp SCCTTSBC
T ss_pred eECCCCcC
Confidence 99999987
|
| >1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-33 Score=259.20 Aligned_cols=321 Identities=16% Similarity=0.109 Sum_probs=196.0
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++ ..+++++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|+...
T Consensus 2 ~li~~~~v~~~~---~~~~~~~v~I~~g~I~~vg~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~g-------- 65 (382)
T 1yrr_A 2 YALTQGRIFTGH---EFLDDHAVVIADGLIKSVCPVAEL----P-PEIEQRSLNGAILSPGFIDVQLNGCGG-------- 65 (382)
T ss_dssp EEEESSEEECSS---CEESSEEEEEETTEEEEEEEGGGS----C-TTCCEEECTTCEEEECEEEEEESEETT--------
T ss_pred EEEEeeEEEcCC---ceeeCCEEEEECCEEEEEecCCCC----C-ccceeecCCCCEEccCEEEEeecccCC--------
Confidence 589999999865 267889999999999999975432 1 245899999999999999999998541
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-CHH-------HHHHHHHHcCCeEEEeccccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVS-------EMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~~~-------~~~~~~~~~g~~~~~~~~~~~ 172 (400)
.++.+| ...+++++.+. .+..++++|||++.++... ... ...+.....+.+.. + .+.
T Consensus 66 ~~~~~~--------~~~~~~~~~~~----~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-g--~~~ 130 (382)
T 1yrr_A 66 VQFNDT--------AEAVSVETLEI----MQKANEKSGCTNYLPTLITTSDELMKQGVRVMREYLAKHPNQAL-G--LHL 130 (382)
T ss_dssp EESSSS--------TTTSSHHHHHH----HHHHHHHTTEEEEEEEEECCCHHHHHHHHHHHHHHHHHCTTSBC-C--EEE
T ss_pred cCcccc--------ccCCCHHHHHH----HHHHHHhCCeEEEEeecCCCCHHHHHHHHHHHHHHhhccCCcee-E--EEE
Confidence 111111 11233433222 4577999999999996422 211 12222222355421 1 111
Q ss_pred CCCCCCcccccCCchHHH-HHHHHHHHHhccCCCCCeEEE-eeccccccCCHHHHHHHHHHHHHcCCeeeE-ecCCCchh
Q 015784 173 CGEGLPASWAVRTTDDCI-QSQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYE 249 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~-H~~~~~~~ 249 (400)
.++...+.+........+ ....+.++ +.....+.++.+ +.++ +.+.++++.++++|+++++ |+.++..+
T Consensus 131 ~g~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~ik~~~~~~~-------~~~~~~~~~a~~~g~~v~~gH~~~~~~~ 202 (382)
T 1yrr_A 131 EGPWLNLVKKGTHNPNFVRKPDAALVD-FLCENADVITKVTLAPE-------MVPAEVISKLANAGIVVSAGHSNATLKE 202 (382)
T ss_dssp ECSSCCCSCC-CCCSCSCCHHHHHHHH-HHHHTTTTEEEEEECGG-------GSCHHHHHHHHHTTCEEEECSCCCCHHH
T ss_pred eCCcCCccccCCCCHHHccCCCHHHHH-HHHhcCCCEEEEEECCC-------CChHHHHHHHHHCCCEEEEECCCCCHHH
Confidence 222222211111110000 11122233 222234567653 2222 3455788899999999998 99877665
Q ss_pred hhHHhhhcCCCCChHHHHh---------HhCCCC-----CC---eeeEEecCCChhHHHHHHhcC-CeEEECcccccccc
Q 015784 250 NQVVMDTRKVDHGTVTFLD---------KIEFLQ-----NN---LLSAHTVWVNHTEIGLLSRAG-VKVSHCPASAMRML 311 (400)
Q Consensus 250 ~~~~~~~~~~~~~~~~~l~---------~~~~~~-----~~---~~~~h~~~~~~~~i~~~~~~~-~~~~~~p~~~~~~~ 311 (400)
.....+. +. ..++++. ..+.++ .+ ..+.|+.++++++++.+++.+ ..+.+++.+.....
T Consensus 203 ~~~~~~~-G~--~~~~h~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~g 279 (382)
T 1yrr_A 203 AKAGFRA-GI--TFATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTDATAPAG 279 (382)
T ss_dssp HHHHHHH-TC--CEESSTTTTSCCBCSSCCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHHHHGGGEEEECCBCTTTT
T ss_pred HHHHHHc-CC--CeeEECCCCCCccccCCcchhhHhhcCCcceeeecCcccccCHHHHHHHHHcCCCcEEEECcChHhcC
Confidence 4443321 11 1222111 000000 01 267899999999999998877 55666665432111
Q ss_pred ---Ccc---cHHHHHHcCCcE-EEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHH
Q 015784 312 ---GFA---PIKEMLHADICV-SLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKS 384 (400)
Q Consensus 312 ---~~~---~~~~~~~~Gv~v-~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~ 384 (400)
+.. .++.++++|+++ +.|||.. +..+++.+|+.+.... +++++++|+++|.|||++
T Consensus 280 ~~~~~~~~~~~~~~~~~Gv~~~~~Gt~~g---~~~~~~~~~~~~~~~~--------------g~~~~~al~~aT~~~A~~ 342 (382)
T 1yrr_A 280 ANIEQFIFAGKTIYYRNGLCVDENGTLSG---SSLTMIEGVRNLVEHC--------------GIALDEVLRMATLYPARA 342 (382)
T ss_dssp SCCSEEEETTEEEEECSSCEECTTCCEEE---BCCCHHHHHHHHHHHH--------------CCCHHHHHHHHTHHHHHH
T ss_pred CCCceEEECCEEEEEECCEEEeCCCcCcC---CccCHHHHHHHHHHHh--------------CCCHHHHHHHHHHHHHHH
Confidence 111 256678899887 4566654 3467999998876322 489999999999999999
Q ss_pred cCCCCCccccccCcCC
Q 015784 385 VLWDNDIGSLEAGKKV 400 (400)
Q Consensus 385 lg~~~~~G~i~~G~~A 400 (400)
||+++++|+|++||+|
T Consensus 343 lg~~~~~G~i~~G~~A 358 (382)
T 1yrr_A 343 IGVEKRLGTLAAGKVA 358 (382)
T ss_dssp TTCTTTSSSCCTTSBC
T ss_pred hCCCCCCCccCCCCCC
Confidence 9999889999999987
|
| >2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.1e-30 Score=252.18 Aligned_cols=328 Identities=16% Similarity=0.192 Sum_probs=194.1
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|+++++ ..+++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|+......
T Consensus 3 m~~li~n~~vv~~~~----~~~~~v~I~~g~I~~Ig~~~~~----~-~~~~viD~~g~~v~PGlID~H~H~~~~~~~--- 70 (559)
T 2fty_A 3 YDLIIKNGIICTASD----IYAAEIAVNNGKVQLIAASIDP----S-LGSEVIDAEGAFITPGGIDAHVHVDEPLKL--- 70 (559)
T ss_dssp EEEEEESCEEECSSC----EEECEEEEETTEEEEEESCCCG----G-GEEEEEECTTCEEEECEEECCBCCCCTTCT---
T ss_pred ceEEEECcEEEcCCC----ceeeeEEEECCEEEEecCCCCC----C-CCCeEEeCCCCEEEcCEEeeccCcCccccc---
Confidence 478999999998642 2578999999999999975431 1 235899999999999999999999763210
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HHHHHHHH----HHcCCeEEEecc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VSEMAKAV----ELLGLRACLVQS 169 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~~~~~~~----~~~g~~~~~~~~ 169 (400)
...+.++.+.. ...++++||||+.+++... .....+.. ...+.+ ..
T Consensus 71 -----------------~~~~~e~~~~~----~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 125 (559)
T 2fty_A 71 -----------------LGDVVDTMEHA----TRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQ----TL 125 (559)
T ss_dssp -----------------TSCCSCCHHHH----HHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTS----CC
T ss_pred -----------------cCCCHHHHHHH----HHHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhh----cc
Confidence 00122333322 3567899999999976322 11122333 333332 00
Q ss_pred cccCCCC-CCcccccCCchH---HH-HHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecC
Q 015784 170 TMDCGEG-LPASWAVRTTDD---CI-QSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (400)
Q Consensus 170 ~~~~~~~-~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~ 244 (400)
..+.++. ....+. ..... .+ ....++++++ +...+++++.++. ...+++.+.++++.|+++|+++++|+.
T Consensus 126 ~~d~~~~~~~~~~~-~~~~~~g~~l~~~~~~l~~~~---G~~~iki~~~~~~-~~~s~e~l~~~~~~A~~~g~~v~~H~e 200 (559)
T 2fty_A 126 YCDYGLHLILFQIE-KPSVEARELLDVQLQAAYNDY---GVSSVKMFMTYPG-LQISDYDIMSAMYATRKNGFTTMLHAE 200 (559)
T ss_dssp SSEEEEEEECCCCC-SSHHHHHHHHHHHHHHHHHHH---CCCEEEEESSSTT-TBCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred eeEEEeeeeeccCc-CCCchhhhhHHHHHHHHHHHC---CCCEEEEEecCCC-CcCCHHHHHHHHHHHHhCCCEEEEECC
Confidence 0110000 000010 00122 33 4444444333 3346777776665 678899999999999999999999995
Q ss_pred CCchhhhHHh---hhcCCC--------CC------hH-HHHhHhCCCCCCeeeEEecCCChh----HHHHHHhcCCeE--
Q 015784 245 EIPYENQVVM---DTRKVD--------HG------TV-TFLDKIEFLQNNLLSAHTVWVNHT----EIGLLSRAGVKV-- 300 (400)
Q Consensus 245 ~~~~~~~~~~---~~~~~~--------~~------~~-~~l~~~~~~~~~~~~~h~~~~~~~----~i~~~~~~~~~~-- 300 (400)
+. ....... ...+.. +- .+ +.+......+.+. |+.|++.+ .++++++.|+.+
T Consensus 201 ~~-~~i~~~~~~~~~~G~~~~~~~~~~~p~~~E~~av~~~i~la~~~g~~v---hi~H~s~~~~~~~i~~ak~~G~~Vt~ 276 (559)
T 2fty_A 201 NG-DMVKWMIEALEEQGLTDAYYHGVSRPSIVEGEATNRAITLATTMDTPI---LFVHVSSPQAAEVIKQAQTKGLKVYA 276 (559)
T ss_dssp CH-HHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHHHHHHHHTTCCE---EECSCCCHHHHHHHHHHHHTTCCEEE
T ss_pred Ch-HHHHHHHHHHHhcCCCChhhcccCCCHHHHHHHHHHHHHHHHHhCCCE---EEEcCCCHHHHHHHHHHHHcCCceEE
Confidence 43 3322211 111110 00 01 1111111233344 44554432 344455577655
Q ss_pred EECccccc-----------------------------------------ccc---------CcccHHHHHHcCCcEEEcC
Q 015784 301 SHCPASAM-----------------------------------------RML---------GFAPIKEMLHADICVSLGT 330 (400)
Q Consensus 301 ~~~p~~~~-----------------------------------------~~~---------~~~~~~~~~~~Gv~v~~gt 330 (400)
.+||...+ .+. ...++.+++++|+++++||
T Consensus 277 e~~p~~l~l~~~~~~~~~~~~~~~~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~PplR~~~~~~~l~~~l~~G~~~~igT 356 (559)
T 2fty_A 277 ETCPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGS 356 (559)
T ss_dssp EECHHHHHCCGGGGSCC--------CCSCCGGGCSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHTTSCSEECC
T ss_pred eecCcccccCHHHhhccccccccccccccCccccccccccccCccccccCcEECCCCCCHHHHHHHHHHHhcCceEEEEe
Confidence 77886210 000 1124677899999999999
Q ss_pred CCCCCCCC-------------------CCHHH--------HHHHHHHHhcccccccCCCCCCCCC-CHHHHHHHHhHHHH
Q 015784 331 DGAPSNNR-------------------MSIVD--------EMYLASLINKGREVFANGTTDPAAL-PAETVLRMATINGA 382 (400)
Q Consensus 331 D~~~~~~~-------------------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~al~~~T~~~A 382 (400)
|+.+++.. .+++. +++....+.+. .....+ +++++++++|.|||
T Consensus 357 D~~p~~~~~k~~~~~k~~~~~~~~~~~~~f~~~~~G~~g~e~~l~~ll~~~--------v~~~~l~~~~~~~~~~t~~~A 428 (559)
T 2fty_A 357 DHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRMPLLYDYG--------YLRGNLTSMMKLVEIQCTNPA 428 (559)
T ss_dssp CBCCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTHHHHHHHHT--------TTTTSSSCHHHHHHHHTHHHH
T ss_pred CCCCCChhhccccccccccccccccccCCHhhCCCCCccHHHHHHHHHHHH--------HHcCCCCCHHHHHHHHhHHHH
Confidence 99765432 23332 34444333221 123458 99999999999999
Q ss_pred HHcCCCCCccccccC-cCC
Q 015784 383 KSVLWDNDIGSLEAG-KKV 400 (400)
Q Consensus 383 ~~lg~~~~~G~i~~G-~~A 400 (400)
++||+++++|+|++| ++|
T Consensus 429 ~~lgl~~~~G~i~~G~~~A 447 (559)
T 2fty_A 429 KVYGMYPQKGSILPGVSDA 447 (559)
T ss_dssp HHTTCTTTSSSCCTTTSBC
T ss_pred HHhCCCCCCceeeccCCcC
Confidence 999997678999999 987
|
| >2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.1e-31 Score=243.48 Aligned_cols=307 Identities=18% Similarity=0.117 Sum_probs=189.6
Q ss_pred ccEEEEecEE-EeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCC-CcEEeCCCcEeeecccccCcCCccccccc
Q 015784 19 STMILHNAVI-VTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMA-DQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 19 ~~~li~n~~i-~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~-~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+++|+|++| +++++...++++++|+|+||+|++|++..... ..+ .++||++|++|+|||||+|+|+...
T Consensus 2 ~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~----~~~~~~viD~~g~~v~PGlID~H~H~~~~---- 73 (386)
T 2vun_A 2 SKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMK----DAGDATIIDAAGSTVTPGLLDTHVHVSGG---- 73 (386)
T ss_dssp CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGT----TCTTCEEEECTTCEEEECEEEEEECCCST----
T ss_pred ccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccC----CCCCceEEcCCCCEEccceeeccccccCC----
Confidence 5789999999 98654333467889999999999999743221 123 5899999999999999999999631
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-----CC--HHHHH--HH---HHHcCCeE
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-----QH--VSEMA--KA---VELLGLRA 164 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-----~~--~~~~~--~~---~~~~g~~~ 164 (400)
+|. + +..+...+..++++||||+.+++. .. ..... +. ....+.+
T Consensus 74 --------~~~-----~----------~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 129 (386)
T 2vun_A 74 --------DYA-----P----------RQKTMDFISSALHGGVTTMISAGSPHFPGRPKDAAGTKALAITLSKSYYNAR- 129 (386)
T ss_dssp --------TEE-----G----------GGTEESHHHHHHTTTEEEEEECCCTTSTTCCCSHHHHHHHHHHHHHHHHHCC-
T ss_pred --------CcC-----h----------hHHHHHHHHHHHhCCceEEEeccccccCCChhhHHHHHHHHHHhhccccccc-
Confidence 110 0 000011346789999999999651 11 21111 11 1111111
Q ss_pred EEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecC
Q 015784 165 CLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (400)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~ 244 (400)
.+...+..+ .+ .... ... .....+.+ ..+...++.+... ...+++.+.++++.|+++|+++.+|+.
T Consensus 130 -~~~~~~~~g--~~-~~~~-~~~--~~~~~~~~----~~g~~~ik~~~~~---~~~~~~~l~~~~~~a~~~g~~v~~H~~ 195 (386)
T 2vun_A 130 -PAGVKVHGG--AV-ILEK-GLT--EEDFIEMK----KEGVWIVGEVGLG---TIKNPEDAAPMVEWAHKHGFKVQMHTG 195 (386)
T ss_dssp -GGGCEEECC--EE-CCCT-TCC--HHHHHHHH----HTTCCEEEEETSS---SCCSHHHHHHHHHHHHHTTCEEEEECS
T ss_pred -ccceeeccC--cc-cccC-CcC--HHHHHHHH----HhCCCeEEEeecC---CCCCHHHHHHHHHHHHHCCCeEEEecC
Confidence 000000011 00 0000 011 12222222 2233455654211 125788999999999999999999997
Q ss_pred CCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecC----CChhHHHHHHhcCCeEEECccccccccCcccHHHHH
Q 015784 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW----VNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEML 320 (400)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~----~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 320 (400)
+...... ....++.+...|. + .+.|+.+ .++++++++++.|+.+..++.......+..+++.++
T Consensus 196 ~~~~~~~--------~~~~i~~~~~~G~---~-~i~H~~~~~~~~~~~~~~~~~~~g~~vl~~~~~g~~~~~~~~~~~~~ 263 (386)
T 2vun_A 196 GTSIPGS--------STVTADDVIKTKP---D-VVSHINGGPTAISVQEVDRIMDETDFAMEIVQCGNPKIADYVARRAA 263 (386)
T ss_dssp CCSCSTT--------CSCCHHHHHHHCC---S-EEETTTCSSSCCCHHHHHHHHHHCCCEEEEESSSCHHHHHHHHHHHH
T ss_pred Ccccccc--------CHHHHHHHHHcCC---C-EEEEccCCCCCCCHHHHHHHHHcCCeEEEeccCCcccccHHHHHHHH
Confidence 5431100 0113333334443 2 4789888 889999999999988733322110114456889999
Q ss_pred HcCC--cEEEcCCCC-CC--CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccc
Q 015784 321 HADI--CVSLGTDGA-PS--NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395 (400)
Q Consensus 321 ~~Gv--~v~~gtD~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~ 395 (400)
++|+ ++++|||++ .. ++..++..+++.+. ..+++++++++++|.|||++||+ + +|+|+
T Consensus 264 ~~g~~d~v~lgTD~p~~~~~~~~g~~~~~~~~~~---------------~~~ls~~~~~~~~T~n~A~~lgl-~-~G~i~ 326 (386)
T 2vun_A 264 EKGQLGRVIFGNDAPSGTGLIPLGILRNMCQIAS---------------MSDIDPEVAVCMATGNSTAVYGL-N-TGVIA 326 (386)
T ss_dssp HHTCGGGEEEECCBSBTTBBCTTHHHHHHHHHHH---------------HSCCCHHHHHHHHTHHHHHHHTC-S-CSSCS
T ss_pred HcCCCceeEEecCCCCCCCCCcchhHHHHHHHHh---------------hcCCCHHHHHHHHhHHHHHHcCC-C-ceeeC
Confidence 9999 999999985 21 12223455554432 13599999999999999999999 4 79999
Q ss_pred cCcCC
Q 015784 396 AGKKV 400 (400)
Q Consensus 396 ~G~~A 400 (400)
+||+|
T Consensus 327 ~G~~A 331 (386)
T 2vun_A 327 PGKEA 331 (386)
T ss_dssp TTSBC
T ss_pred CCCee
Confidence 99987
|
| >1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.2e-30 Score=246.93 Aligned_cols=313 Identities=17% Similarity=0.169 Sum_probs=190.6
Q ss_pred CCCCCCCCCCCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh------hh-hccCCCcEEeCCCcEe
Q 015784 6 SGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL------QQ-FSQMADQIIDLQSQIL 78 (400)
Q Consensus 6 ~~~~~~~~~~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~------~~-~~~~~~~viD~~g~~v 78 (400)
.|++.++.....+.+++|+|++|++.. . +.+++|+|+||+|++||+..... .. ....+.++||++|++|
T Consensus 53 ~~~~~~~~~~~~~~dllI~n~~Vid~~---g-i~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV 128 (569)
T 1e9y_B 53 EGMSQSNNPSKEELDLIITNALIVDYT---G-IYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIV 128 (569)
T ss_dssp BTTTBCSSCCTTCCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEE
T ss_pred cCCCcCcCCCcccCCEEEEeeEEECCC---C-cEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEE
Confidence 344444433334568999999999843 2 46789999999999999753210 00 0123568999999999
Q ss_pred eecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC---------
Q 015784 79 LPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------- 149 (400)
Q Consensus 79 ~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~--------- 149 (400)
+|||||+|+|+.. .. . +..++++||||+.+++...
T Consensus 129 ~PGlID~HvHl~~------------------------p~----~--------~~~al~~GvTTv~d~g~~p~~~t~~~~~ 172 (569)
T 1e9y_B 129 TAGGIDTHIHFIS------------------------PQ----Q--------IPTAFASGVTTMIGGGTGPADGTNATTI 172 (569)
T ss_dssp EECEEEEEEETTC------------------------TT----H--------HHHHHHTTEEEEEEECCSSCHHHHHCCC
T ss_pred ecCEEEEeecCCC------------------------cH----H--------HHHHHhCCeeEEEcCCcCCCCCCcCccc
Confidence 9999999999843 00 0 2568999999999985211
Q ss_pred ------HHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHH
Q 015784 150 ------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (400)
Q Consensus 150 ------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 223 (400)
.....+.+...+++...... + .. . ......+.++ . +.. .+.++..+..+++
T Consensus 173 ~~g~~~l~~~~~a~~~~~~~~~~~g~----g--~~------~---~~~~l~e~~~----~--Ga~--gik~~~~~~~t~e 229 (569)
T 1e9y_B 173 TPGRRNLKWMLRAAEEYSMNLGFLAK----G--NA------S---NDASLADQIE----A--GAI--GFKIHEDWGTTPS 229 (569)
T ss_dssp CCHHHHHHHHHHHHTTSSSEEEEEEE----C--CC------S---CHHHHHHHHH----T--TCS--EEEECGGGCCCHH
T ss_pred CCcHHHHHHHHHHhcccCceEEEECC----C--Cc------C---CHHHHHHHHH----c--CCC--EEEecCCCCCCHH
Confidence 22334445555555432110 0 00 0 1122222222 2 222 2334445567899
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC----hhHHHHHHhcCCe
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN----HTEIGLLSRAGVK 299 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~----~~~i~~~~~~~~~ 299 (400)
.+.++++.|+++|+++.+|+.+.... .. ..+.+... .+.+..+.|..... ++.++++++.|+.
T Consensus 230 ~l~~~l~~A~~~g~~V~iHa~~~~e~-g~----------~~~~la~~--~g~~~hi~H~~~~~~~~~~d~I~~~~~~gv~ 296 (569)
T 1e9y_B 230 AINHALDVADKYDVQVAIHTDTLNEA-GC----------VEDTMAAI--AGRTMHTFHTEGAGGGHAPDIIKVAGEHNIL 296 (569)
T ss_dssp HHHHHHHHHHHTTCEEEECCCTTCSS-CC----------HHHHHHHH--TTCCEEETTTTSTTSCSTTTGGGGGGSTTEE
T ss_pred HHHHHHHHHHHhCCEEEEEcCCcccc-hH----------HHHHHHHH--cCCCEEEEEcccCcccccHHHHHHHHHcCCe
Confidence 99999999999999999999742211 00 11122221 23345555655543 6789999988875
Q ss_pred EEECcccc-c----------------cc-----------------cCcccHHHHHHcCCcEEEcCCCCCCCCC----CCH
Q 015784 300 VSHCPASA-M----------------RM-----------------LGFAPIKEMLHADICVSLGTDGAPSNNR----MSI 341 (400)
Q Consensus 300 ~~~~p~~~-~----------------~~-----------------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~----~~~ 341 (400)
.++++.+. + .+ ....+++.+.+.|+++++|||+++.+.. .++
T Consensus 297 ~~~~~ptl~~t~~~~~~~~d~~~v~h~l~~~~~ed~~~~~~rlr~~~~a~~~~L~d~Gv~v~iGSD~~~~~~~g~~~~~~ 376 (569)
T 1e9y_B 297 PASTNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGRVGEVITRT 376 (569)
T ss_dssp EEECGGGCSCBTTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCCTTSHHHHH
T ss_pred eEeeCCccccccchhhhhhchhhhhhhcCcccHHHHHHhhcchhhhHHHHHHHHHhCCCEEEEeCCCCccCcccccccch
Confidence 44432211 0 00 0112345567789999999999865321 112
Q ss_pred HH---HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 342 VD---EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 342 ~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
|. ++... .+ . .......+.+++++++|+++|.|||+++|+++++|+|++||.|
T Consensus 377 ~~~~~~~~~~--~G--~--l~~~~~~~~~ls~~~al~~~T~npA~~lGl~~~~GsIe~Gk~A 432 (569)
T 1e9y_B 377 WQTADKNKKE--FG--R--LKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVGSVEVGKVA 432 (569)
T ss_dssp HHHHHHHHHH--HC--S--CSSCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSSSSCTTSBC
T ss_pred hhHHHHhHhh--cc--C--cchhhccccCCCHHHHHHHHhHHHHHHcCCCCCccCcCCCCCC
Confidence 32 22210 10 0 0000112456899999999999999999999888999999987
|
| >1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.5e-30 Score=245.98 Aligned_cols=326 Identities=15% Similarity=0.175 Sum_probs=192.7
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++ ..+++|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+....
T Consensus 1 ~~li~n~~vv~~~~----~~~~~v~I~~g~I~~ig~~~~~-----~~~~~viD~~G~~v~PGlID~H~H~~~~~------ 65 (458)
T 1gkp_A 1 PLLIKNGEIITADS----RYKADIYAEGETITRIGQNLEA-----PPGTEVIDATGKYVFPGFIDPHVHIYLPF------ 65 (458)
T ss_dssp CEEEESCEEEETTE----EEECEEEESSSBCCEEESCCCC-----CTTCEEEECTTSEEEECEEEEEECSSCEE------
T ss_pred CEEEEeeEEECCCC----ceEeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEecCEEecccCCCcCC------
Confidence 36899999998642 2578999999999999975321 12458999999999999999999996521
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc----CCHHHHHHHHHHc-CCeEEEecccccCC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELL-GLRACLVQSTMDCG 174 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~----~~~~~~~~~~~~~-g~~~~~~~~~~~~~ 174 (400)
......++.+.. .+.++++|||++.+++. .......+..... .-+...........
T Consensus 66 ---------------~~~~~~~~~~~~----~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (458)
T 1gkp_A 66 ---------------MATFAKDTHETG----SKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAV 126 (458)
T ss_dssp ---------------TTEECSCCHHHH----HHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEEC
T ss_pred ---------------CCCcCHhHHHHH----HHHHHhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEee
Confidence 001122233322 24568899999999642 2232222222111 11100000000000
Q ss_pred CCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHh
Q 015784 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (400)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (400)
+ . ..........++++ .+...++++..++.....+++.+.++++.|+++++++++|+ ++....+...
T Consensus 127 ---~-~----~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~v~~H~-e~~~~~~~~~ 193 (458)
T 1gkp_A 127 ---S-K----FDEKTEGQLREIVA----DGISSFKIFLSYKNFFGVDDGEMYQTLRLAKELGVIVTAHC-ENAELVGRLQ 193 (458)
T ss_dssp ---C-C----CCTTHHHHHHHHHH----TTCCEEEEEECSTTTTBCCHHHHHHHHHHHHHHTCEEEEEE-SCHHHHHHHH
T ss_pred ---c-C----CchhhHHHHHHHHH----hCCCEEEEEeccCCCcCCCHHHHHHHHHHHHhcCCEEEEEc-CCHHHHHHHH
Confidence 0 0 11122333333332 23344666666666677889999999999999999999999 5544433221
Q ss_pred hh---cCCC-------CChH--------HHHhHhCCCCCCeeeEEecCC-ChhHHHHHHhcCCeE--EECcc------cc
Q 015784 255 DT---RKVD-------HGTV--------TFLDKIEFLQNNLLSAHTVWV-NHTEIGLLSRAGVKV--SHCPA------SA 307 (400)
Q Consensus 255 ~~---~~~~-------~~~~--------~~l~~~~~~~~~~~~~h~~~~-~~~~i~~~~~~~~~~--~~~p~------~~ 307 (400)
+. .+.. ..+. +.+...+..+.+..+.|+... ..+.++.+++.|+.+ .+||. ++
T Consensus 194 ~~~~~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~~~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~ 273 (458)
T 1gkp_A 194 QKLLSEGKTGPEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTY 273 (458)
T ss_dssp HHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHHTCEEEECSCCSHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGG
T ss_pred HHHHhcCCCChhhccCcCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHcCCeEEEEecccceeeCHHH
Confidence 11 1110 0111 122223334445545554331 124578888899865 57876 44
Q ss_pred ccc--------cCccc---------HHHHHHcCCcEEEcCCCCCCCCC------CCHHH--------HHHHHHHHhcccc
Q 015784 308 MRM--------LGFAP---------IKEMLHADICVSLGTDGAPSNNR------MSIVD--------EMYLASLINKGRE 356 (400)
Q Consensus 308 ~~~--------~~~~~---------~~~~~~~Gv~v~~gtD~~~~~~~------~~~~~--------~~~~~~~~~~~~~ 356 (400)
+.. ...+| +.+++++|+.+++|||+.+++.. -+++. ++++...+.+..
T Consensus 274 ~~~~~~~g~~~~~~~p~r~~~~~~~l~~~~~~G~~~~~gtD~~~~~~~~k~~~~~~~~~~~~g~~g~~~~l~~~~~~~~- 352 (458)
T 1gkp_A 274 AERGGVEAMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTYGV- 352 (458)
T ss_dssp GGSCHHHHHTTCCSSCCCCTHHHHHHHHHHHTTSSCEEECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHHHT-
T ss_pred hcccccCCcceEEeCCCCCHHHHHHHHHHHhcCCeeEEECCCCCCCHHHhhcccCChhhCCCCcccHHHHHHHHHHHHH-
Confidence 321 01123 34688999999999998765311 01111 333333222111
Q ss_pred cccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 357 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 357 ~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+|++++++++|.|||++||+++++|+|++|++|
T Consensus 353 -------~~~~ls~~~al~~~T~~pA~~lgl~~~~G~l~~G~~A 389 (458)
T 1gkp_A 353 -------SRGRLDIHRFVDAASTKAAKLFGLFPRKGTIAVGSDA 389 (458)
T ss_dssp -------TSSSCCHHHHHHHHTHHHHHHTTCTTTSSSCCTTSBC
T ss_pred -------HcCCCCHHHHHHHHhhCHHHHhCCCCCCCcCCCCCcC
Confidence 1234999999999999999999998778999999987
|
| >1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6 | Back alignment and structure |
|---|
Probab=99.97 E-value=6.4e-30 Score=243.21 Aligned_cols=318 Identities=16% Similarity=0.161 Sum_probs=187.6
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
.+++|+|++|+++++ . .+++|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~~li~~~~v~~~~~---~-~~~~v~I~~g~I~~ig~~~~~-----~~~~~viD~~g~~v~PGlID~H~H~~~~~~---- 68 (458)
T 1gkr_A 2 FDVIVKNCRLVSSDG---I-TEADILVKDGKVAAISADTSD-----VEASRTIDAGGKFVMPGVVDEHVHIIDMDL---- 68 (458)
T ss_dssp EEEEEEEEEEEETTE---E-EEEEEEEETTEEEEEESCCTT-----CCEEEEEECTTCEEEECEEEEEEECCCGGG----
T ss_pred ceEEEECcEEECCCC---c-eeeeEEEECCEEEEecCCCCC-----CCCCeEEeCCCCEEecCEEEeeecccCCCC----
Confidence 478999999998542 2 678999999999999975321 123589999999999999999999964210
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cCC--------HHHHHHHHHHcCCeEEEecc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQH--------VSEMAKAVELLGLRACLVQS 169 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~~--------~~~~~~~~~~~g~~~~~~~~ 169 (400)
+ .+.++... ..+.++++|||++.+++ ... .....+.+....++......
T Consensus 69 ----~--------------~~~~~~~~----~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (458)
T 1gkr_A 69 ----K--------------NRYGRFEL----DSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLKVDFALYGG 126 (458)
T ss_dssp ----T--------------TTSCCHHH----HHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEEEE
T ss_pred ----C--------------CchhHHHH----HHHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCceeEEEEec
Confidence 0 01122221 23557889999999986 221 11222333332222211111
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccc---cccCCHHHHHHHHHHHHHcCCeeeEecCCC
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQ---IMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~ 246 (400)
. . ........++++ .+...+++++.++. ....+++.+.++++.|+++++++.+|+.+.
T Consensus 127 ~-------~--------~~~~~~~~~~~~----~g~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 187 (458)
T 1gkr_A 127 G-------V--------PGNLPEIRKMHD----AGAVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHAENE 187 (458)
T ss_dssp C-------C--------TTCHHHHHHHHH----TTCCEEEEESSCSBTTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCH
T ss_pred c-------C--------CCCHHHHHHHHH----cCCcEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEECCCH
Confidence 0 0 011222333332 22345666555543 356789999999999999999999999543
Q ss_pred chhhhHHh---hhcCCCCChHHHHh------------HhCCCCCC-eeeEEecCCCh-hHHHHHH---hcC--CeEEECc
Q 015784 247 PYENQVVM---DTRKVDHGTVTFLD------------KIEFLQNN-LLSAHTVWVNH-TEIGLLS---RAG--VKVSHCP 304 (400)
Q Consensus 247 ~~~~~~~~---~~~~~~~~~~~~l~------------~~~~~~~~-~~~~h~~~~~~-~~i~~~~---~~~--~~~~~~p 304 (400)
...+... ...+.. ..++++. ....+... -.-.|+.|++. .+++.+. +.| +.+.+||
T Consensus 188 -~~~~~~~~~~~~~G~~-~~~~h~~~~~~~~~~~~~~~~~~la~~~g~~~h~~H~~~~~~~~~i~~~~~~G~~v~~~~~p 265 (458)
T 1gkr_A 188 -TIIQALQKQIKAAGGK-DMAAYEASQPVFQENEAIQRALLLQKEAGCRLIVLHVSNPDGVELIHQAQSEGQDVHCESGP 265 (458)
T ss_dssp -HHHHHHHHHHHHTTCC-SHHHHHHHSCHHHHHHHHHHHHHHHHHHCCEEEECCCCSHHHHHHHHHHHHTTCCEEEEECH
T ss_pred -HHHHHHHHHHhhcCcc-chhhccccCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHCCCcEEEEEch
Confidence 3222211 122210 1222211 10000000 11245555553 4455444 466 5677788
Q ss_pred cccc-------------cc-------cCcccHHHHHHcCCcEEEcCCCCCCCCC------CCHHH--------HHHHHHH
Q 015784 305 ASAM-------------RM-------LGFAPIKEMLHADICVSLGTDGAPSNNR------MSIVD--------EMYLASL 350 (400)
Q Consensus 305 ~~~~-------------~~-------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~------~~~~~--------~~~~~~~ 350 (400)
.... +. .+..+++++++.|+.+++|||+.+++.. .+++. ++.....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~l~~~~~~G~~~~lgtD~~~~~~~~k~~g~~~~~~~~~~~~g~~~~l~~~ 345 (458)
T 1gkr_A 266 QYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSLPMM 345 (458)
T ss_dssp HHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEECCCEECCCGGGTGGGGTCGGGSCCCBCCTTTHHHHH
T ss_pred HHheeCHHHhhccCceEEEcCCCCCHHHHHHHHHHHhCCCceEEEeCCCCCChHHhccccCCHhHCCCCcccHHHHHHHH
Confidence 6421 11 1123567788999999999998654322 34443 2222222
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.+.. ...+++++++|+++|.|||++||+++++|+|++||+|
T Consensus 346 ~~~~~--------~~~~l~~~~al~~~T~~~A~~lgl~~~~G~l~~G~~A 387 (458)
T 1gkr_A 346 LTNGV--------NKGRLSLERLVEVMCEKPAKLFGIYPQKGTLQVGSDA 387 (458)
T ss_dssp HHHTG--------GGTSSCHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBC
T ss_pred HHHHH--------HhCCCCHHHHHHHHhhhHHHHhCCCCCCccCCCCCcC
Confidence 22110 1235999999999999999999998778999999987
|
| >2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 | Back alignment and structure |
|---|
Probab=99.97 E-value=4.6e-30 Score=238.20 Aligned_cols=300 Identities=15% Similarity=0.121 Sum_probs=188.8
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCC-cEeeecccccCcCCcccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS-QILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g-~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
++++|+|++|++++ +++|+|+||+|++|++... ..+.++||++| ++|+|||||+|+|+.....
T Consensus 5 ~~~~i~~~~v~~~~-------~~~v~i~~g~I~~ig~~~~------~~~~~~iD~~g~~~v~PG~ID~H~H~~~~~~--- 68 (379)
T 2ics_A 5 YDLLIKNGQTVNGM-------PVEIAIKEKKIAAVAATIS------GSAKETIHLEPGTYVSAGWIDDHVHCFEKMA--- 68 (379)
T ss_dssp EEEEEEEEECTTSC-------EEEEEEETTEEEEEESCCC------CCEEEEEECCTTCEEEECEEEEEECCCTTSS---
T ss_pred ccEEEECCEEEcCC-------cceEEEECCEEEEecCCCC------CCCCcEEeCCCCEEEccCEEEeccccCccCc---
Confidence 57899999999731 5699999999999997532 12358999999 9999999999999965210
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc---CCHHHHHHHHHHcCC--eEEEeccccc
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG---QHVSEMAKAVELLGL--RACLVQSTMD 172 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~---~~~~~~~~~~~~~g~--~~~~~~~~~~ 172 (400)
. .| . + ..+.++++|||++.+++. ...+...+..+..+. +.+.....
T Consensus 69 ----~--------~~---~-----~-------~~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-- 119 (379)
T 2ics_A 69 ----L--------YY---D-----Y-------PDEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISK-- 119 (379)
T ss_dssp ----S--------SC---C-----C-------HHHHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESST--
T ss_pred ----c--------cc---C-----c-------hhhhHhhCceeEEEcCCCCCccCHHHHHHHHHhhcccEEEEccccc--
Confidence 0 00 0 0 114578999999998652 334555666666553 22222211
Q ss_pred CCCCCCc-ccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHH-cCCeeeEecCCCchhh
Q 015784 173 CGEGLPA-SWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMARE-FKTGIHMHVAEIPYEN 250 (400)
Q Consensus 173 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~-~~~~v~~H~~~~~~~~ 250 (400)
.|. .+. .... ......+...+.++++.. ....++.+...+.....+.+.+.+.+++|++ .++++.+|+.++....
T Consensus 120 ~G~-~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~ 196 (379)
T 2ics_A 120 WGI-VAQDELAD-LSKVQASLVKKAIQELPD-FVVGIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHL 196 (379)
T ss_dssp TTT-SSSCTTSS-GGGCCHHHHHHHHHHCTT-TEEEEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCH
T ss_pred cCC-CCHHHHHH-HHHHHHHHHHHHHHhhhC-cceEEEEeccccccccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchH
Confidence 121 111 1100 011122334444443211 1112344443333344677888899999999 9999999997654322
Q ss_pred hHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC---------h---hHHHHHHhcCCeEEECccccccccCcccHHH
Q 015784 251 QVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---------H---TEIGLLSRAGVKVSHCPASAMRMLGFAPIKE 318 (400)
Q Consensus 251 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~---------~---~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 318 (400)
+.+.+.... + ..+.|+.... + ++++++++.|+.+.++|.++. .+..++++
T Consensus 197 ~~~~~~~~~-----------g-----~~~~H~~~~~~~~~~~~s~~~~~~~~~~~~~~g~~~~~~p~~~~--~~~~~~~~ 258 (379)
T 2ics_A 197 DEILALMEK-----------G-----DVLTHCFNGKENGILDQATDKIKDFAWQAYNKGVVFDIGHGTDS--FNFHVAET 258 (379)
T ss_dssp HHHHHHCCT-----------T-----CEEESTTCCSTTSSEETTTTEECHHHHHHHHTTCEEECCCTTTS--CCHHHHHH
T ss_pred HHHHHHhhc-----------C-----CeeeeccCCCccchhhccCHHHHHHHHHHHHcCCEEEecCCCCC--cCHHHHHH
Confidence 222211111 1 1344544322 2 788888999999999987543 24567889
Q ss_pred HHHcC-CcEEEcCCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 015784 319 MLHAD-ICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 319 ~~~~G-v~v~~gtD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~ 393 (400)
++++| ++++++||+++. .+...+...+..... .+++++++++++|.|||++||+++ +|+
T Consensus 259 ~~~~G~~~~~l~TD~~~~~~~~~~~~~~~~~l~~~~~---------------~~ls~~~~~~~~T~n~A~~lgl~~-~G~ 322 (379)
T 2ics_A 259 ALREGMKAASISTDIYIRNRENGPVYDLATTMEKLRV---------------VGYDWPEIIEKVTKAPAENFHLTQ-KGT 322 (379)
T ss_dssp HHHTTCCCSBCCCCBCHHHHHSSSCCCHHHHHHHHHH---------------HTCCHHHHHHTTTHHHHHHTTCTT-SSS
T ss_pred HHHcCCCcceEeccCcccCCCCCcHhHHHHHHHHHHH---------------cCCCHHHHHHHHHHHHHHHhCCCC-CcC
Confidence 99999 899999998621 012233333333221 149999999999999999999987 799
Q ss_pred cccCcCC
Q 015784 394 LEAGKKV 400 (400)
Q Consensus 394 i~~G~~A 400 (400)
|++||+|
T Consensus 323 l~~G~~A 329 (379)
T 2ics_A 323 LEIGKDA 329 (379)
T ss_dssp CCTTSBC
T ss_pred CCCCCcc
Confidence 9999987
|
| >2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.8e-30 Score=242.55 Aligned_cols=307 Identities=18% Similarity=0.181 Sum_probs=185.8
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEe-CCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~-~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
++++|+|++|+++++. ....+++|+|+ ||+|++|++..+. ..+.++||++|++|+|||||+|+|+.......
T Consensus 15 ~~~li~n~~vv~~~~~-~~~~~~~v~I~~~g~I~~Ig~~~~~-----~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~- 87 (417)
T 2ogj_A 15 APILLTNVKPVGFGKG-ASQSSTDILIGGDGKIAAVGSALQA-----PADTQRIDAKGAFISPGWVDLHVHIWHGGTDI- 87 (417)
T ss_dssp CCEEEEEEEECSSCTT-CCCSCEEEEECTTSBEEEEETTCCC-----SSCEEECCC--CEEEECEEEEEECCCBTTBSS-
T ss_pred CcEEEECCEEEcCCCC-ccCccceEEEecCCEEEEeccCCCC-----CCCCeEEECCCCEEccCeeecccccccccccc-
Confidence 5789999999975432 13467899999 9999999975321 12458999999999999999999996532110
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC---CHHHHHHH-HHHcC--CeEEEecccc
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ---HVSEMAKA-VELLG--LRACLVQSTM 171 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~---~~~~~~~~-~~~~g--~~~~~~~~~~ 171 (400)
..+.. ..++++||||+.+++.. ......+. .+... ++.++....
T Consensus 88 -------------------~~~~~----------~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~- 137 (417)
T 2ogj_A 88 -------------------SIRPS----------ECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNLGS- 137 (417)
T ss_dssp -------------------CCCGG----------GTSGGGTEEEEEEESSCCSTTHHHHHHHTTTTCSSEEEEEEESST-
T ss_pred -------------------CCCHH----------HHHHhCCcCeEEeCCcCCCcCHHHHHHHHhhccccCeEEEecccc-
Confidence 00111 23788999999997532 23222221 11112 233332211
Q ss_pred cCCCCC---CcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCch
Q 015784 172 DCGEGL---PASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (400)
Q Consensus 172 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~ 248 (400)
.|... ..+... ..........+.++.+... ...++.+..++.....+.+.+.++++.+++.|+++.+|+.++..
T Consensus 138 -~G~~~~~~~~e~~~-~~~~~~~~~~~~~~~~~~~-~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~ 214 (417)
T 2ogj_A 138 -IGLVACNRVPELRD-IKDIDLDRILECYAENSEH-IVGLKVRASHVITGSWGVTPVKLGKKIAKILKVPMMVHVGEPPA 214 (417)
T ss_dssp -TTTTTTTTSCSCSS-GGGCCHHHHHHHHHTCTTT-EEEEEEEESHHHHTTCTTHHHHHHHHHHHHHTCCEEEEECSSSS
T ss_pred -CcCCCCCCcccccc-hhhcCHHHHHHHHHhCCCc-eEEEEEEecCCccccccHHHHHHHHHHHHHcCCcEEEEcCCCcc
Confidence 11100 001100 0001122333334333211 11245555544445567788899999999999999999976543
Q ss_pred hhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-----------hHHHHHHhcCCeEEECccccccccCcccHH
Q 015784 249 ENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-----------TEIGLLSRAGVKVSHCPASAMRMLGFAPIK 317 (400)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-----------~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~ 317 (400)
..+... .. +....++.|+.+..+ ++++++++.|+.+.++|.... .+..+++
T Consensus 215 ~~~~~~-------------~~---l~~g~~~~H~~~~~~~~~~~~~~~~~~~i~~~~~~g~~v~~~~~~~~--~~~~~~~ 276 (417)
T 2ogj_A 215 LYDEVL-------------EI---LGPGDVVTHCFNGKSGSSIMEDEDLFNLAERCAGEGIRLDIGHGGAS--FSFKVAE 276 (417)
T ss_dssp CHHHHH-------------HH---CCTTCEEETTTCCCTTTCTTSCHHHHHHHHHC--CCCEEECCBCSSS--CCHHHHH
T ss_pred cHHHHH-------------HH---hcCCCEEEeccCCCccchhccCHHHHHHHHHHHhcCcEEEecCCCcc--ccchHHH
Confidence 222111 11 122355677765332 577778888988877775321 2456789
Q ss_pred HHHHcC-CcEEEcCCCCCCC-C---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 318 EMLHAD-ICVSLGTDGAPSN-N---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 318 ~~~~~G-v~v~~gtD~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
.++++| +++++|||+. .+ . ...+...+.... ..+++++++++++|.|||++||+++ +|
T Consensus 277 ~~~~~G~~~~~lgtD~~-~~~~~g~~~~l~~~~~~~~---------------~~~l~~~~al~~~T~n~A~~lgl~~-~G 339 (417)
T 2ogj_A 277 AAIARGLLPFSISTDLH-GHSMNFPVWDLATTMSKLL---------------SVDMPFENVVEAVTRNPASVIRLDM-EN 339 (417)
T ss_dssp HHHHTTCCCSBCCBCBS-TTTTTTTCCCHHHHHHHHH---------------HTTCCHHHHHHTTTHHHHHHTTCCC-SS
T ss_pred HHHHcCCCceEEEcCCC-CCccCCChhHHHHHHHHHH---------------HcCCCHHHHHHHHHHHHHHHhCCCC-CC
Confidence 999999 9999999986 42 1 122333333221 1249999999999999999999987 79
Q ss_pred ccccCcCC
Q 015784 393 SLEAGKKV 400 (400)
Q Consensus 393 ~i~~G~~A 400 (400)
+|++||+|
T Consensus 340 ~l~~G~~A 347 (417)
T 2ogj_A 340 RLDVGQRA 347 (417)
T ss_dssp TTSTTSBC
T ss_pred ccCCCCcc
Confidence 99999987
|
| >3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.8e-29 Score=235.68 Aligned_cols=319 Identities=15% Similarity=0.203 Sum_probs=189.4
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|++++ . +.+++|+|+||+|++|++..+ ..+.++||++|++|+|||||+|+|+....
T Consensus 2 ~~~i~n~~v~~~~---~-~~~~~v~i~~g~I~~i~~~~~------~~~~~viD~~g~~v~PG~ID~H~H~~~~~------ 65 (461)
T 3sfw_A 2 KKWIRNGTVVTAS---D-TYQADVLIDGEKVVAIGSDLQ------ATDAEVIDATGYYLLPGGIDPHTHLDMPF------ 65 (461)
T ss_dssp EEEEESCEEECSS---C-EEECEEEEETTEEEEEESCCC------CSSCEEEECTTCEEEECEEEEEECTTCEE------
T ss_pred cEEEECeEEECCC---C-cEEEEEEEECCEEEEEeCCCC------CCCCeEEECCCCEEEeeeEEeEeccCcCC------
Confidence 6899999999844 2 357799999999999998642 23578999999999999999999996521
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----CHHHHHHHH-HHc---C-CeEEEeccc
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAV-ELL---G-LRACLVQST 170 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~-~~~---g-~~~~~~~~~ 170 (400)
......++... ..+.++++|||++.++... ......+.. ... . +..... ..
T Consensus 66 ---------------~~~~~~e~~~~----~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~-~~ 125 (461)
T 3sfw_A 66 ---------------GGTVTSDNFFT----GTKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFH-LM 125 (461)
T ss_dssp ---------------TTEECSCCHHH----HHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEE-EE
T ss_pred ---------------CCcccHhHHHH----HHHHHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEE-EE
Confidence 00111222222 2356789999999996532 222222211 111 1 111111 00
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
. . ......+....++.+. .+...++.++........+++.+.++++.++++|+++.+|+.+... .
T Consensus 126 ~------~-----~~~~~~~~~~~~l~~~---~G~~~ik~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~-~ 190 (461)
T 3sfw_A 126 V------S-----DANDHVLEELESVVNN---EGITSLKVFMAYKNVLMADDETLFKTLIRAKELGALVQVHAENGDV-L 190 (461)
T ss_dssp C------S-----CCCHHHHHHHHHHHHT---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHH-H
T ss_pred E------e-----CCCHHHHHHHHHHHHh---CCCCEEEEEEecCCCcccCHHHHHHHHHHHHhcCCEEEEEcCCHHH-H
Confidence 0 0 0122333334333331 3334566666655556788999999999999999999999754332 2
Q ss_pred hHHh-hhcCCC----------CC------hH-HHHhHhCCCCCCeeeEEecCCCh----hHHHHHHhcCCeE--EECccc
Q 015784 251 QVVM-DTRKVD----------HG------TV-TFLDKIEFLQNNLLSAHTVWVNH----TEIGLLSRAGVKV--SHCPAS 306 (400)
Q Consensus 251 ~~~~-~~~~~~----------~~------~~-~~l~~~~~~~~~~~~~h~~~~~~----~~i~~~~~~~~~~--~~~p~~ 306 (400)
.... .....+ +- .+ +.+......+.+ .|..|++. +.++.+++.|+.+ .+||..
T Consensus 191 ~~~~~~~~~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~g~~---~hi~H~s~~~~l~~i~~ak~~G~~vt~e~~ph~ 267 (461)
T 3sfw_A 191 DYLTKQALAEGNTDPIYHAYTRPPEAEGEATGRAIALTALADAQ---LYVVHVSCADAVRRIAEAREKGWNVYGETCPQY 267 (461)
T ss_dssp HHHHHHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHTTCE---EEECSCCSHHHHHHHHHHHHTTCEEEEEECHHH
T ss_pred HHHHHHHHhcCCCChhHhcccCCHHHHHHHHHHHHHHHHHhCCC---EEEEecCcHHHHHHHHHHHhcCCcEEEeeccce
Confidence 2111 000000 00 01 111212222333 36666654 5677788888765 677752
Q ss_pred cc--------------cccCcc---------cHHHHHHcCCcEEEcCCCCCCCCCC------CHH---------HHHHHH
Q 015784 307 AM--------------RMLGFA---------PIKEMLHADICVSLGTDGAPSNNRM------SIV---------DEMYLA 348 (400)
Q Consensus 307 ~~--------------~~~~~~---------~~~~~~~~Gv~v~~gtD~~~~~~~~------~~~---------~~~~~~ 348 (400)
.. ...-.+ .+.++++.|+.+++|||+.+.+... +.| .+....
T Consensus 268 l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~l~~G~~~~i~sD~~p~~~~~~k~~~~~~~~~~~~G~~g~e~~~~ 347 (461)
T 3sfw_A 268 LVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSALKNGILQTVGSDHCPFNFSGQKELGRRDFTKIPNGGPIIEDRMT 347 (461)
T ss_dssp HHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHHHHTTSSCEECCCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHHH
T ss_pred EEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHHHhcCCceEEECCCCCCCchhhhhcccCCHhhCCCCCccHHHHHH
Confidence 11 001112 2466788899999999998763111 011 112222
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 349 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+... .....++++++++++|.|||+++|+++++|+|++|+.|
T Consensus 348 ~~~~~~--------~~~~~~~~~~~~~~~t~~~a~~~g~~~~~G~l~~G~~A 391 (461)
T 3sfw_A 348 ILFSEG--------VRKGKISLNQFVDITSTKVAKLFGMFPQKGTIAVGSDA 391 (461)
T ss_dssp HHHHHT--------TTTTSSCHHHHHHHHTHHHHHHHTCTTTSSSCSTTSBC
T ss_pred HHHHHH--------HHcCCCCHHHHHHHHhHHHHHHcCCCCCCCccCCCCcC
Confidence 222211 13455999999999999999999997778999999987
|
| >1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.5e-29 Score=240.83 Aligned_cols=315 Identities=17% Similarity=0.173 Sum_probs=183.6
Q ss_pred CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccc
Q 015784 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (400)
Q Consensus 16 ~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~ 95 (400)
+.+++++|+|++|+++++ ..+++++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+.....
T Consensus 44 ~~mm~~~i~~~~v~~~~~--~~~~~~~v~i~~g~I~~i~~~~~------~~~~~~iD~~g~~v~PGlID~H~H~~~~~~- 114 (467)
T 1xrt_A 44 RWMLKLIVKNGYVIDPSQ--NLEGEFDILVENGKIKKIDKNIL------VPEAEIIDAKGLIVCPGFIDIHVHLRDPGQ- 114 (467)
T ss_dssp --CCEEEEESCEEEEGGG--TEEEECEEEEETTEEEEEESSCC------CSSEEEEECTTSEEEECEEEEEECCCTTTC-
T ss_pred cceeeEEEEeeEEECCCC--CceecceEEEECCEEEEecCCCC------CCCCcEEeCCCCEEccCEEEEeecccCCCC-
Confidence 344568999999998542 24578899999999999997532 124589999999999999999999964110
Q ss_pred cccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------CHHHHHHHHHHcC-CeEEE
Q 015784 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLG-LRACL 166 (400)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------~~~~~~~~~~~~g-~~~~~ 166 (400)
. ..++... ..+.++++|||++.+++.. ......+.+...+ ++...
T Consensus 115 ---------~-------------~~~~~~~----~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 168 (467)
T 1xrt_A 115 ---------T-------------YKEDIES----GSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLP 168 (467)
T ss_dssp ---------T-------------TTCCHHH----HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEE
T ss_pred ---------C-------------chhhHHH----HHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEE
Confidence 0 0111111 2356889999999998632 1344556666667 66433
Q ss_pred ecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCC
Q 015784 167 VQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~ 246 (400)
... +. ........ ....++++. +.. .++.+.....+++.++++++.|+++|+++.+|+.+.
T Consensus 169 ~g~-~~------~~~~~~~~----~~~~~l~~~------g~~--~i~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~ 229 (467)
T 1xrt_A 169 TGT-IT------KGRKGKEI----ADFYSLKEA------GCV--AFTDDGSPVMDSSVMRKALELASQLGVPIMDHCEDD 229 (467)
T ss_dssp CBC-SB------GGGCSSSB----CCHHHHHHH------TCC--CBCCTTSCCCCHHHHHHHHHHHHHHTCEEEECCCGG
T ss_pred Eee-ec------CCCCcccH----HHHHHHHHc------CCE--EEEcCCCCCCCHHHHHHHHHHHHhcCCEEEEECCCH
Confidence 211 11 11101111 112222221 111 123344456788999999999999999999999875
Q ss_pred chhhhHH-----hhhcCCCCChHHHH----------hHhCCCCCCeeeEEecCCCh----hHHHHHHhcC--CeEEECcc
Q 015784 247 PYENQVV-----MDTRKVDHGTVTFL----------DKIEFLQNNLLSAHTVWVNH----TEIGLLSRAG--VKVSHCPA 305 (400)
Q Consensus 247 ~~~~~~~-----~~~~~~~~~~~~~l----------~~~~~~~~~~~~~h~~~~~~----~~i~~~~~~~--~~~~~~p~ 305 (400)
......+ ...++. ..++.+ ......+ ...|+.|++. +.++++++.| +.+.+||.
T Consensus 230 ~~~~~~l~~g~~~~~~g~--~~~~~~~e~~~~~~~~~~~~~~g---~~~hi~H~~~~~~~~~i~~~~~~G~~v~~~~~p~ 304 (467)
T 1xrt_A 230 KLAYGVINEGEVSALLGL--SSRAPEAEEIQIARDGILAQRTG---GHVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPN 304 (467)
T ss_dssp GGTC----------------------CHHHHHHHHHHHHHHHC---CEEEESCCCSHHHHHHHHHHHHTTCCEEEEECGG
T ss_pred HHHHHHHhcCccchhccc--ccCChHHHHHHHHHHHHHHHHhC---CCEEEEeCCCHHHHHHHHHHHhcCCcEEEeccHH
Confidence 5321111 001110 011110 1111111 2345555543 3345555788 55778886
Q ss_pred ccc-------------cc-------cCcccHHHHHHcCCcEEEcCCCCCCCCCC-CHHHHH---------HHHHHHhccc
Q 015784 306 SAM-------------RM-------LGFAPIKEMLHADICVSLGTDGAPSNNRM-SIVDEM---------YLASLINKGR 355 (400)
Q Consensus 306 ~~~-------------~~-------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~-~~~~~~---------~~~~~~~~~~ 355 (400)
..+ +. ....++++++++|+++++|||+.+.+... ++|.++ +....+. ..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~~~l~~Gv~~~lgTD~~~~~~~~~~~~~~~~~g~~g~e~~l~~~l~-~~ 383 (467)
T 1xrt_A 305 HLLFTEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEKELVEFAMPGIIGLQTALPSALE-LY 383 (467)
T ss_dssp GGC----------------------CCHHHHHHHHHHTCSCEECCCBCCCCC-----------CCCCGGGHHHHHHH-HH
T ss_pred HHhcCHhHhhccCceEEEcCCCCCHHHHHHHHHHHhCCceEEEeeCCCCCChhHhcccccCCCCCccHHHHHHHHHH-HH
Confidence 321 11 12335678899999999999987653211 122211 1111110 00
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....++++++|+++|.|||++||++ +|+|++||.|
T Consensus 384 --------~~g~ls~~~al~~aT~n~A~~lgl~--~G~I~~G~~A 418 (467)
T 1xrt_A 384 --------RKGIISLKKLIEMFTINPARIIGVD--LGTLKLGSPA 418 (467)
T ss_dssp --------HTTSSCHHHHHHHHTHHHHHHHTCS--CSCCCTTSBC
T ss_pred --------HcCCCCHHHHHHHhccCHHHHhCCC--cccccCCCCC
Confidence 1223999999999999999999997 6999999987
|
| >2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-29 Score=240.23 Aligned_cols=327 Identities=12% Similarity=0.122 Sum_probs=187.3
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+++++|+|++|+++++ ..+++|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+..... +
T Consensus 24 ~~~~~li~n~~v~~~~~----~~~~~V~I~~grI~~Ig~~~~~-----~~~~~vID~~G~~v~PGlID~H~H~~~~~~-~ 93 (501)
T 2vm8_A 24 TSDRLLIKGGKIVNDDQ----SFYADIYMEDGLIKQIGENLIV-----PGGVKTIEAHSRMVIPGGIDVHTRFQMPDQ-G 93 (501)
T ss_dssp -CCCEEEEEEEEECSSC----EEEEEEEEETTEEEEEESSCCC-----CSSSCEEECTTCEEEECEEEEEECTTCEET-T
T ss_pred CcCCEEEEeeEEECCCC----ceEeeEEEECCEEEEeccCCCC-----CCCCeEEECCCCEEeeCEEEeeeccccccc-C
Confidence 44689999999998642 3568999999999999975421 124689999999999999999999965221 0
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc----CCHHHHHH----HHHHcCCeEEEec
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAK----AVELLGLRACLVQ 168 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~----~~~~~~~~----~~~~~g~~~~~~~ 168 (400)
..+.++.+. ..+.++++|||++.++.. .......+ .......... +
T Consensus 94 --------------------~~~~e~~~~----~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g- 147 (501)
T 2vm8_A 94 --------------------MTSADDFFQ----GTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDY-S- 147 (501)
T ss_dssp --------------------EECSSCHHH----HHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHHCSSEE-E-
T ss_pred --------------------CCcHHHHHH----HHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcCCeeEE-E-
Confidence 001222222 235689999999998642 12222222 2222122111 1
Q ss_pred ccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCch
Q 015784 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPY 248 (400)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~ 248 (400)
.....+. + ......+..++.++ .+...++++...+.....+.+.+.++++.|+++++++.+|+.+...
T Consensus 148 -~~~~~~~----~----~~~~~~e~~~l~~~---~G~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~ 215 (501)
T 2vm8_A 148 -LHVDISE----W----HKGIQEEMEALVKD---HGVNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIGAIAQVHAENGDI 215 (501)
T ss_dssp -EEEECCS----C----SHHHHHHHHHHHHH---SCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECCCHHH
T ss_pred -EEEEecC----C----CcccHHHHHHHHHh---CCceEEEEeeccCCCCCCCHHHHHHHHHHHHHhCCEEEEEccChHH
Confidence 1101110 1 11122333333322 2333566555544445678899999999999999999999864322
Q ss_pred hhhHHhh--hcCCCC--------------ChHH-HHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCCeEEECcccccc-
Q 015784 249 ENQVVMD--TRKVDH--------------GTVT-FLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVKVSHCPASAMR- 309 (400)
Q Consensus 249 ~~~~~~~--~~~~~~--------------~~~~-~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~~~~~p~~~~~- 309 (400)
..+.... ..+... ..++ .+......+.+..+.|+.... .+.++.+++.|+.+. +|.....
T Consensus 216 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~g~~~hi~h~~~~~~~~~i~~~~~~G~~v~-~~~~~~~l 294 (501)
T 2vm8_A 216 IAEEQQRILDLGITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYITKVMSKSSAEVIAQARKKGTVVY-GEPITASL 294 (501)
T ss_dssp HHHHHHHHHTTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHHHTCCEEEEEECCHHHHHHHHHHHHTTCCEE-EEEBHHHH
T ss_pred HHHHHHHHHhcCCCChhhccccCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcHHHHHHHHHHHhCCCcEE-EEEChhHh
Confidence 1111111 111110 0111 111111224456666765321 233555677888763 3332100
Q ss_pred -----------------c----------cCcccHHHHHHcCCcEEEcCCCCCCCCCCC------HH--------HHHHHH
Q 015784 310 -----------------M----------LGFAPIKEMLHADICVSLGTDGAPSNNRMS------IV--------DEMYLA 348 (400)
Q Consensus 310 -----------------~----------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~------~~--------~~~~~~ 348 (400)
. .+..+++++++.|+.+++|||+.+.+...+ +. .++++.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~l~~~l~~G~~~~~gtD~~~~~~~~~~~~~~~~~~~~~G~~g~e~~l~ 374 (501)
T 2vm8_A 295 GTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEERMS 374 (501)
T ss_dssp HCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHH
T ss_pred hcChhhhcccccccCceEEECCCCCCCcchHHHHHHHHhcCceEEEEecCCCCChhhhhcccCChhhCCCCCccHHHHHH
Confidence 0 012345568999999999999875421000 00 011111
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 349 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..+... ....+++++++++++|.|||++||+++++|+|++|+.|
T Consensus 375 ~~~~~~--------~~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~l~~G~~A 418 (501)
T 2vm8_A 375 VIWDKA--------VVTGKMDENQFVAVTSTNAAKVFNLYPRKGRIAVGSDA 418 (501)
T ss_dssp HHHHHH--------TTTTSSCHHHHHHHHTHHHHHHHTCTTTSSCCCTTSBC
T ss_pred HHHHHH--------HHcCCCCHHHHHHHHhHhHHHHhCCCCCCCccCCCCcC
Confidence 111110 12346999999999999999999998778999999987
|
| >4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-30 Score=241.01 Aligned_cols=321 Identities=18% Similarity=0.184 Sum_probs=188.7
Q ss_pred CCCCCCCCCC--CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh--h-----hhccCCCcEEeCCCc
Q 015784 6 SGGGSSSGSL--GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--Q-----QFSQMADQIIDLQSQ 76 (400)
Q Consensus 6 ~~~~~~~~~~--~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~--~-----~~~~~~~~viD~~g~ 76 (400)
.|++.++... ....+++|+|++|++.. . +.+++|+|+||+|++|++..... . .....+.++||++|+
T Consensus 52 ~~~~~~~~~~~~~~~~dllI~n~~vvd~~---g-~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~ 127 (570)
T 4ac7_C 52 EGMGENGTYTRTENVLDLLLTNALILDYT---G-IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGK 127 (570)
T ss_dssp BTTTBCSSCCTTTTBCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTC
T ss_pred cccCcCCCCCcccCCCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCC
Confidence 3444444332 33568999999999843 2 46789999999999999854310 0 001235789999999
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------- 148 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-------- 148 (400)
+|+|||||+|+|+.. +. . .+.++++|+||+.+.+..
T Consensus 128 ~v~PG~ID~HvH~~~------------------------Pg-----~-------~~aAl~gGvTTvv~gg~~p~~~~n~~ 171 (570)
T 4ac7_C 128 IVTAGGIDTHVHFIN------------------------PD-----Q-------VDVALANGITTLFGGGTGPAEGSKAT 171 (570)
T ss_dssp EEEECEEEEEEECCC------------------------TT-----H-------HHHHHHTTEEEEEEECSSSCHHHHHS
T ss_pred EEeeCEEecccccCC------------------------cc-----h-------HHHHHhcCCeEEEecCcCcccccCCc
Confidence 999999999999843 10 0 035889999999953210
Q ss_pred -------CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCC
Q 015784 149 -------HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT 221 (400)
Q Consensus 149 -------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
....+.+.+....++....... ......+..++.+ .+...++.. ..+..+
T Consensus 172 p~~~~~~~l~~~l~aa~~~~v~~~~~g~~---------------~~~~l~el~el~~----aGa~gfK~~----~~~~~~ 228 (570)
T 4ac7_C 172 TVTPGPWNIEKMLKSTEGLPINVGILGKG---------------HGSSIAPIMEQID----AGAAGLKIH----EDWGAT 228 (570)
T ss_dssp SCCCHHHHHHHHHHHHTTCSSEEEEEEEC---------------CCSSHHHHHHHHH----HTCCEEEEE----GGGCCC
T ss_pred CcCCcHHHHHHHHHHhhhCCeeEEEEecc---------------CCcCHHHHHHHHH----cCCCeEeec----cCCCCC
Confidence 1122334444444433222110 0011222333322 111223322 234568
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhC-CCCCCeeeEEecCCC-hhHHHHHHhcCCe
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVN-HTEIGLLSRAGVK 299 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~h~~~~~-~~~i~~~~~~~~~ 299 (400)
++.+.++++.|++.++++.+|+.+... ... ..+.+.... .....+.++|+.... ++.++++.+.++.
T Consensus 229 ~~~L~~aL~~A~~~g~~V~iHae~l~e-~g~----------Vedalea~~Gr~ih~~HiEgag~~hapd~i~~~~~~~vl 297 (570)
T 4ac7_C 229 PASIDRSLTVADEADVQVAIHSDTLNE-AGF----------LEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVL 297 (570)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCTTCS-SCC----------HHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCCcch-hhH----------HHHHHHHhCCCcceeEeeeccccccChHHHHHhccCCcc
Confidence 999999999999999999999974322 111 111222211 110011222222222 5666666666665
Q ss_pred EEE-Cccc----c-----------------------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCC-HHHH
Q 015784 300 VSH-CPAS----A-----------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS-IVDE 344 (400)
Q Consensus 300 ~~~-~p~~----~-----------------------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~-~~~~ 344 (400)
.+. +|.. + .+..+.++++.|++.|+.+++|||++..+.... +.+.
T Consensus 298 ps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~~~~ 377 (570)
T 4ac7_C 298 PSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRT 377 (570)
T ss_dssp EBCCGGGSSCBTTHHHHHHHHHHHHTTCCTTCHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHH
T ss_pred ccccCCCCCcccchhHHhhhheeeecccCccccchhHHHHhhhhhhhcccccchhhcCCEEEEECcccccCCcCcccCcH
Confidence 443 2320 0 011234578899999999999999986432222 2333
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 345 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+..+..+...+..+......++.++++++|+++|.|||+++|+++++|+|++||.|
T Consensus 378 ~~~a~~~~~~rg~l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~A 433 (570)
T 4ac7_C 378 WQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFA 433 (570)
T ss_dssp HHHHHHHHHHHCSCTTCCTTCCHHHHHHHHHHHTHHHHHHHTCTTTSSSCCTTSBC
T ss_pred HHHHHHHHHhcCCCCCccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCcc
Confidence 33332221111111111124567899999999999999999999989999999987
|
| >4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C* | Back alignment and structure |
|---|
Probab=99.97 E-value=8.6e-30 Score=241.01 Aligned_cols=321 Identities=18% Similarity=0.184 Sum_probs=188.9
Q ss_pred CCCCCCCCCC--CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh--hh-----hccCCCcEEeCCCc
Q 015784 6 SGGGSSSGSL--GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL--QQ-----FSQMADQIIDLQSQ 76 (400)
Q Consensus 6 ~~~~~~~~~~--~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~--~~-----~~~~~~~viD~~g~ 76 (400)
.|++.++... ....+++|+|++|++.. . +.+++|+|+||+|++|++..... .. ....+.++||++|+
T Consensus 52 ~~~~~~~~~~~~~~~~dllI~n~~vvd~~---g-~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~ 127 (570)
T 4ubp_C 52 EGMGENGTYTRTENVLDLLLTNALILDYT---G-IYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGK 127 (570)
T ss_dssp BTTTBCSSCCTTTTBCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTC
T ss_pred cccCcCCCCCcccCCCCEEEECeEEECCC---C-cEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCC
Confidence 3444444332 33568999999999843 2 46789999999999999854210 00 01235789999999
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-------- 148 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-------- 148 (400)
+|+|||||+|+|+.. +. . .+.++++|+||+.+.+..
T Consensus 128 ~v~PG~ID~HvH~~~------------------------Pg-----~-------~~aAl~gGvTTvv~gg~~p~~~~n~~ 171 (570)
T 4ubp_C 128 IVTAGGIDTHVHFIN------------------------PD-----Q-------VDVALANGITTLFGGGTGPAEGSKAT 171 (570)
T ss_dssp EEEECEEEEEEECCC------------------------TT-----H-------HHHHHHTTEEEEEEECCSSCHHHHHS
T ss_pred EEeeCEEEcccCCCC------------------------cc-----h-------HHHHHhcCCeEEEecCccccccCCCc
Confidence 999999999999843 10 0 035889999999953210
Q ss_pred -------CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCC
Q 015784 149 -------HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT 221 (400)
Q Consensus 149 -------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
....+.+.+....++....... ......+..++.+ .+...++.. ..+..+
T Consensus 172 p~~~~~~~l~~~l~aa~~~~v~~~~~g~~---------------~~~~l~el~el~~----aGa~gfK~~----~~~~~~ 228 (570)
T 4ubp_C 172 TVTPGPWNIEKMLKSTEGLPINVGILGKG---------------HGSSIAPIMEQID----AGAAGLKIH----EDWGAT 228 (570)
T ss_dssp SCCCHHHHHHHHHHHHTTCSSEEEEEEEC---------------CCSSHHHHHHHHH----HTCCEEEEE----GGGCCC
T ss_pred CCCCcHHHHHHHHHHhhhCCeeEEEEecc---------------CCcCHHHHHHHHH----cCCCeEeec----cCCCCC
Confidence 1122334444444433222110 0011222333322 111223322 234568
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhC-CCCCCeeeEEecCCC-hhHHHHHHhcCCe
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVN-HTEIGLLSRAGVK 299 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~h~~~~~-~~~i~~~~~~~~~ 299 (400)
++.+.++++.|++.++++.+|+.+... ... ..+.+.... .....+.++|+.... ++.++++.+.++.
T Consensus 229 ~~~L~~aL~~A~~~g~~V~iHae~l~e-~g~----------Vedalea~~Gr~ih~~HiEgag~~hapd~i~~~~~~~vl 297 (570)
T 4ubp_C 229 PASIDRSLTVADEADVQVAIHSDTLNE-AGF----------LEDTLRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVL 297 (570)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCTTCS-SCC----------HHHHHHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEcCCcch-hhH----------HHHHHHHhCCCceeEEEecccccccChHHHHHhccCCcc
Confidence 999999999999999999999974322 111 112222211 110011222222222 5666666666665
Q ss_pred EEE-Cccc----c-----------------------------ccccCcccHHHHHHcCCcEEEcCCCCCCCCCCC-HHHH
Q 015784 300 VSH-CPAS----A-----------------------------MRMLGFAPIKEMLHADICVSLGTDGAPSNNRMS-IVDE 344 (400)
Q Consensus 300 ~~~-~p~~----~-----------------------------~~~~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~-~~~~ 344 (400)
.+. +|.. + .+..+.++++.|++.|+.+++|||++..+.... +.+.
T Consensus 298 ps~t~Pt~p~~~n~~~e~ld~l~v~hhl~~~i~~D~~~a~~Rir~~~i~a~~~L~d~G~~v~~gSD~p~~~~~ge~~~~~ 377 (570)
T 4ubp_C 298 PSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETIAAEDILHDLGIISMMSTDALAMGRAGEMVLRT 377 (570)
T ss_dssp EBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHH
T ss_pred ccccCCCCCcccchhHHhhhheeeecccCccccchhHHHHhhhhhhccccccchhhcCCEEEEECcccccCCcCcccCcH
Confidence 443 3320 0 011234578899999999999999986432222 2333
Q ss_pred HHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 345 MYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+..+..+...+..+......++.++++++|+++|.|||+++|+++++|+|++||.|
T Consensus 378 ~~~a~~~~~~rg~l~~~~~~~~~~~~~eal~~~T~~~A~~lg~~~~~Gsi~~Gk~A 433 (570)
T 4ubp_C 378 WQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVGSIEEGKFA 433 (570)
T ss_dssp HHHHHHHHHHHCSCTTCCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSCCTTSBC
T ss_pred HHHHHHHHHhcCCCCCccccccCCCHHHHHHHHhHHHHHHhCCCCCCcccCCCCcc
Confidence 33332221111111111124567899999999999999999999989999999987
|
| >2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.6e-29 Score=234.43 Aligned_cols=321 Identities=17% Similarity=0.160 Sum_probs=193.7
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCC-CcEeeecccccCcCCcccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQ-SQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~-g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
++++|+|++|++++ ..+++++|+|+||+|++|++..+. . .+.++||++ |++|+|||||+|+|+....
T Consensus 3 ~~~li~~~~v~~~~---~~~~~~~v~I~~g~I~~ig~~~~~----~-~~~~viD~~~g~~v~PGlID~H~H~~~~~---- 70 (396)
T 2vhl_A 3 ESLLIKDIAIVTEN---EVIKNGYVGINDGKISTVSTERPK----E-PYSKEIQAPADSVLLPGMIDIHIHGGYGA---- 70 (396)
T ss_dssp CCEEEEEEEEECSS---CEEEEEEEEEETTEEEEEESSCCS----S-CCSEEEECCTTCEEEECEEEEEECEETTE----
T ss_pred ccEEEEeeEEEcCC---ccccCceEEEECCEEEEEECCCCC----C-CCCceEcCCCCCEEcCCEEEEeecCCcCc----
Confidence 46899999999865 256788999999999999832110 0 135899999 9999999999999996521
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-CHH-------HHHHHHHH-c----CCeE
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-HVS-------EMAKAVEL-L----GLRA 164 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-~~~-------~~~~~~~~-~----g~~~ 164 (400)
++ ...++++.+ ..+..++++|||++.+++.. ... ...+.... . +.+.
T Consensus 71 ----~~------------~~~~~e~~~----~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~ 130 (396)
T 2vhl_A 71 ----DT------------MDASFSTLD----IMSSRLPEEGTTSFLATTITQEHGNISQALVNAREWKAAEESSLLGAEL 130 (396)
T ss_dssp ----EG------------GGCSHHHHH----HHHHHGGGGTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCSGGGSSSEE
T ss_pred ----cc------------cCCCHHHHH----HHHHHHHcCCeeEEEecccCCCHHHHHHHHHHHHHHHhcccccccccce
Confidence 01 012333332 24578999999999998632 221 12222222 1 2211
Q ss_pred EEecccccCCCCCCcccccCC-chHHHHHHHHHHHHhccCCCCCeEEE-eeccccccCCHHHHHHHHHHHHHcCCeeeE-
Q 015784 165 CLVQSTMDCGEGLPASWAVRT-TDDCIQSQKELYAKHHHAADGRIRIW-FGIRQIMNATDRLLLETRDMAREFKTGIHM- 241 (400)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~- 241 (400)
... +..++.+.+...+.. .........+.++++.....+.++.+ ..++.... .++++.++++|+++.+
T Consensus 131 ~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~p~~~~~------~~~~~~a~~~g~~v~~g 201 (396)
T 2vhl_A 131 LGI---HLEGPFVSPKRAGAQPKEWIRPSDVELFKKWQQEAGGLIKIVTLAPEEDQH------FELIRHLKDESIIASMG 201 (396)
T ss_dssp EEE---EEECSSSCGGGCTTSCGGGCCCCCHHHHHHHHHHTTTCEEEEEECGGGSGG------GHHHHHHHHTTCEEEEC
T ss_pred EEE---eeecCccCccccCCCCHHHccCCCHHHHHHHHHhcCCcceEEEECCCCCCH------HHHHHHHHHCCCEEeec
Confidence 110 001111111000000 00000001122223322233566643 44443221 2567788999999998
Q ss_pred ecCCCchhhhHHhhhcCCCCChHHHH---------hHhCCC-----CCCe---eeEEecCCChhHHHHHHhc-CC-eEEE
Q 015784 242 HVAEIPYENQVVMDTRKVDHGTVTFL---------DKIEFL-----QNNL---LSAHTVWVNHTEIGLLSRA-GV-KVSH 302 (400)
Q Consensus 242 H~~~~~~~~~~~~~~~~~~~~~~~~l---------~~~~~~-----~~~~---~~~h~~~~~~~~i~~~~~~-~~-~~~~ 302 (400)
|+.++..+.+...+. +.. .++++ ...|++ ..+. ++.|+.++++++++.+.+. +. .+..
T Consensus 202 H~~~~~~~~~~a~~~-G~~--~i~H~~~~~~~~~~~~~G~~~~~~~~~~~~~e~~~h~~~l~~~~~~~~~~~~~~~~~~~ 278 (396)
T 2vhl_A 202 HTDADSALLSDAAKA-GAS--HMTHLYNAMSPFHHREPGVIGTALAHDGFVTELIADGIHSHPLAAKLAFLAKGSSKLIL 278 (396)
T ss_dssp SBCCCHHHHHHHHHT-TCC--EESSTTSSBCCCCSSSCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHHHHCTTSEEE
T ss_pred ccCCCHHHHHHHHHc-CCC--EeEeCCccCcccccCCCCchhhhhcCCCcEEEEcCCccccCHHHHHHHHhhcCCccEEE
Confidence 998777655544432 110 11111 111111 1122 6789999999999988886 66 5778
Q ss_pred CccccccccCc-------ccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 015784 303 CPASAMRMLGF-------APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375 (400)
Q Consensus 303 ~p~~~~~~~~~-------~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~ 375 (400)
+|.+... .+. .|++.+.+.| .+.+ +|+..++...+++.+++.+.... +++++++|+
T Consensus 279 ~~~~~~~-~g~~~~~~~~~~~~~~~~~g-~~~~-~d~~~~g~~~~l~~~l~~~~~~~--------------~~~~~~~l~ 341 (396)
T 2vhl_A 279 ITDSMRA-KGLKDGVYEFGGQSVTVRGR-TALL-SDGTLAGSILKMNEGARHMREFT--------------NCSWTDIAN 341 (396)
T ss_dssp ECCBCTT-TTSCSEEEEETTEEEEEETT-EEEC-TTSCBCSBCCCHHHHHHHHHHHH--------------CCCHHHHHH
T ss_pred ECcChhh-cCCCCceEEECCeEEEEECC-EEEe-CCCcccccccCHHHHHHHHHHhc--------------CCCHHHHHH
Confidence 8876431 111 2445566778 6777 77665555678899888765322 389999999
Q ss_pred HHhHHHHHHcCCCCCccccccCcCC
Q 015784 376 MATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 376 ~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++|.|||++||+++++|+|++|++|
T Consensus 342 ~aT~~~A~~lgl~~~~G~i~~G~~A 366 (396)
T 2vhl_A 342 ITSENAAKQLGIFDRKGSVTVGKDA 366 (396)
T ss_dssp HHTHHHHHHHTCTTTSSSCCTTSBC
T ss_pred HHHHHHHHHhCCcCCCceeCCCCcC
Confidence 9999999999998878999999987
|
| >1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6 | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-29 Score=239.28 Aligned_cols=318 Identities=15% Similarity=0.189 Sum_probs=174.0
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
+++|+|++|+++++ ..+++|+|+||+|++|++... .+.++||++|++|+|||||+|+|+......
T Consensus 2 ~~li~n~~v~~~~~----~~~~~v~I~~g~I~~ig~~~~-------~~~~viD~~G~~v~PGlID~H~H~~~~~~~---- 66 (457)
T 1nfg_A 2 DIIIKNGTIVTADG----ISRADLGIKDGKITQIGGALG-------PAERTIDAAGRYVFPGGIDVHTHVETVSFN---- 66 (457)
T ss_dssp CEEEEEEEEEETTE----EEEEEEEEETTEEEEESSCCC-------CCSEEEECTTCEEEECEEEEEECCSCEETT----
T ss_pred cEEEEeeEEEeCCC----ceeeeEEEECCEEEEecCCCC-------CCCeEEeCCCCEEccceEeeccccccCcCC----
Confidence 58999999998642 357899999999999997431 246899999999999999999999642100
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC----CHHHHHHHHHHc-CCeEEEecccccCC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELL-GLRACLVQSTMDCG 174 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~-g~~~~~~~~~~~~~ 174 (400)
.+..++.+.. .+.++++||||+.+++.. ......+..... .-+.......+...
T Consensus 67 -----------------~~~~e~~~~~----~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (457)
T 1nfg_A 67 -----------------TQSADTFATA----TVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIV 125 (457)
T ss_dssp -----------------EECSCCHHHH----HHHHHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEEC
T ss_pred -----------------CCChhhHHHH----HHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccCccCEEEEEee
Confidence 0122222222 255789999999997532 122222211111 00000000011011
Q ss_pred CCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHh
Q 015784 175 EGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM 254 (400)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~ 254 (400)
+. ...... +.++++...+...++.+.........+++.+.++++.+++.+.++.+|+.. ........
T Consensus 126 ~~--------~~~~~~----~~~~~~~~~G~~~~k~~~~~~~~~~~~~~~~~~~~~~a~~~~~~v~~H~e~-~~~~~~~~ 192 (457)
T 1nfg_A 126 LD--------PTDSVI----EELEVLPDLGITSFKVFMAYRGMNMIDDVTLLKTLDKAVKTGSLVMVHAEN-GDAADYLR 192 (457)
T ss_dssp SS--------CCHHHH----HHTTTGGGGTCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECCC-HHHHHHHH
T ss_pred cC--------CchhHH----HHHHHHHHcCCCEEEEeeccCCCCCCCHHHHHHHHHHHHhcCCEEEEeCCC-HHHHHHHH
Confidence 00 011111 112222233333455544332223456778888889999999999999843 32221111
Q ss_pred h---hcCCCCC------------------hHHHHhHhCCCCCCeeeEEecCCChh---HHHHHHhcCCeEE--ECccc--
Q 015784 255 D---TRKVDHG------------------TVTFLDKIEFLQNNLLSAHTVWVNHT---EIGLLSRAGVKVS--HCPAS-- 306 (400)
Q Consensus 255 ~---~~~~~~~------------------~~~~l~~~~~~~~~~~~~h~~~~~~~---~i~~~~~~~~~~~--~~p~~-- 306 (400)
+ ..+.... .++.....+ .+..+.|.. +.+ .++.+++.|..+. ++|..
T Consensus 193 ~~~~~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~g---~~~~~~H~~--~~~~~~~~~~~~~~G~~v~~~~~~h~~~ 267 (457)
T 1nfg_A 193 DKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVN---APIYIVHVT--CEESLEEVMRAKSRGVRALAETCTHYLY 267 (457)
T ss_dssp HHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHT---CCEEECCCC--SHHHHHHHHHHHHHTCCEEECEEGGGGT
T ss_pred HHHHhcCCcchhhccccCCHHHHHHHHHHHHHHHHHHC---CCEEEEeCC--cHHHHHHHHHHHHcCCeEEEEEchHHhE
Confidence 0 1111000 001111222 222233433 222 2333334554332 22221
Q ss_pred ----cc----------------cc-cCcccHHHHHHcCCcEEEcCCCCCCCCC-------CCHHH--------HHHHHHH
Q 015784 307 ----AM----------------RM-LGFAPIKEMLHADICVSLGTDGAPSNNR-------MSIVD--------EMYLASL 350 (400)
Q Consensus 307 ----~~----------------~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~-------~~~~~--------~~~~~~~ 350 (400)
.+ +. .+..+++.++++|+++++|||+.+++.. .+++. ++++...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~~~G~~~~~gtD~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~~~~~ 347 (457)
T 1nfg_A 268 LTKEDLERPDFEGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMV 347 (457)
T ss_dssp CCGGGGGCTTTGGGGGCCSSCCCCHHHHHHHHHHHHTTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHH
T ss_pred eCHHHhccccccCceeEEcCCCCCHHHHHHHHHHHhCCCeEEEecCCCCCChHHhhhcccCCHhHCCCCcccHHHHHHHH
Confidence 00 11 1234577889999999999998765322 23332 3333222
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+. .. ...+++++++|+++|.|||++||+++++|+|++||+|
T Consensus 348 ~~-~~--------~~~~l~~~~~l~~~T~~~A~~lgl~~~~G~i~~G~~A 388 (457)
T 1nfg_A 348 YQ-GV--------NEGRISLTQFVELVATRPAKVFGMFPQKGTIAVGSDA 388 (457)
T ss_dssp HH-HH--------HTTSSCHHHHHHHHTHHHHHHTTCTTTSSSCSTTSBC
T ss_pred HH-HH--------HcCCCCHHHHHHHHhhhHHHHhCCCCCCcCcCCCCcc
Confidence 21 00 1234999999999999999999998778999999987
|
| >2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.6e-30 Score=242.64 Aligned_cols=317 Identities=17% Similarity=0.184 Sum_probs=183.5
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecC-ChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ-SADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~-~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
+++++|+|++|++++ . +.+++|+|+||+|++|++ ..... .+..+.++||++|++|+|||||+|+|+....
T Consensus 3 ~m~~li~~~~v~~~~---~-~~~~~v~i~~g~I~~i~~~~~~~~--~~~~~~~viD~~g~~v~PGlID~H~H~~~~~--- 73 (452)
T 2gwn_A 3 AMKILLRNALITNEG---K-TFPGSVMIDGAFISRIIEGELPAD--DNLSADEVIECSGLRLFPGCIDDQVHFREPG--- 73 (452)
T ss_dssp CSEEEEEEEEEEETT---E-EEEEEEEEETTEEEEEEESCCCTT--CCTTCSEEEECTTCEEEECEEEEEECCCTTT---
T ss_pred cccEEEECeEEECCC---c-eeeeeEEEECCEEEEEecCCCccc--cCCCCCeEEeCCCCEEecCEEeeccccCCCC---
Confidence 357899999999853 2 468899999999999987 43210 0012458999999999999999999996410
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-----HH---HHHHHHHHcCCeEEEec
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-----VS---EMAKAVELLGLRACLVQ 168 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-----~~---~~~~~~~~~g~~~~~~~ 168 (400)
..+.++.+..+ +.++++|||++.++.... .+ ...+.+.....-.+...
T Consensus 74 --------------------~~~~e~~~~~~----~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (452)
T 2gwn_A 74 --------------------LTHKATIASES----RAAVAGGVTSFMDMPNTNPPTTMWERLLEKRQIGADTAWANYGFF 129 (452)
T ss_dssp --------------------CTTTCCHHHHH----HHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEEC
T ss_pred --------------------CCcHHHHHHHH----HHHHhCCeEEEEcCCCCCCCCChHHHHHHHHHHhhccCcccEEEE
Confidence 01222222222 457789999999976321 11 11222222111100000
Q ss_pred c------------cccCC-CCCCc--cccc-CCchHHHHHHHHHHHHhccCCCCCeEEEee-------------------
Q 015784 169 S------------TMDCG-EGLPA--SWAV-RTTDDCIQSQKELYAKHHHAADGRIRIWFG------------------- 213 (400)
Q Consensus 169 ~------------~~~~~-~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 213 (400)
. ....+ .++.. .... ...........+.++.. ...+.....
T Consensus 130 ~~~~~~~~~~i~~~~~~g~~g~k~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~h~~~~~~~~~~~~~~~~~~G~~ 205 (452)
T 2gwn_A 130 FGGTNDNIDEIKRVDKHLVPGLKLFLGSSTGNMLVDNKETLEKIFGEC----DLLIATHCEKEEIIRANKEHYKAKYGND 205 (452)
T ss_dssp EECCSSCHHHHHTCCTTSCSCEEEESSSCCGGGBCCCHHHHHHHHHHC----CSCEEEECCCHHHHHHHHHHHHHHHCSC
T ss_pred EeecCCCHHHHHHHHHcCCCEEEEEeccCCCCcccCCHHHHHHHHHHc----CCEEEEcCCCHHHHHhHHhhhhhhcCcc
Confidence 0 00000 00000 0000 00000111222223322 112211100
Q ss_pred --c--c---ccccCCHHHHHHHHHHHHHcCCeeeE-ecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCe---eeEEe
Q 015784 214 --I--R---QIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL---LSAHT 282 (400)
Q Consensus 214 --~--~---~~~~~~~e~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~h~ 282 (400)
+ | .......+.+++++++|+++|+++++ |+. +....+.+.+.. .++.. +. ++.|+
T Consensus 206 ~~~~~h~~~~~~~~~~~~l~~~~~la~~~g~~v~i~H~~-~~~~~~~~~~~~-----------a~~~~--~v~~~~~~h~ 271 (452)
T 2gwn_A 206 LDIHFHPLIRSEEACYRSSAEAVELAERMNARLHILHLS-TEKELSLFRNDI-----------PTAQK--RITSEVCVHH 271 (452)
T ss_dssp CCGGGHHHHSCHHHHHHHHHHHHHHHHHHTCCEEECCCC-CTGGGGGSCCSS-----------CGGGC--SEEEEEEHHH
T ss_pred cchhhccccCChHHHHHHHHHHHHHHHHhCCCEEEEeCC-CHHHHHHHHHhh-----------cccCC--CeEEEEchHH
Confidence 0 0 01112256788899999999999999 887 443333222100 00100 12 33488
Q ss_pred cCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCC---CCHHH--------HHHHHHH
Q 015784 283 VWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNR---MSIVD--------EMYLASL 350 (400)
Q Consensus 283 ~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~---~~~~~--------~~~~~~~ 350 (400)
.++++++++. .|+.+.++|. ++. .+..++++++++|+++++|||+.+++.. .+++. +++....
T Consensus 272 ~~l~~~~~~~---~g~~~~~~P~--lr~~~~~~~l~~~l~~Gv~~~lgTD~~~~~~~~k~~~~~~~~~g~~~~e~~~~~~ 346 (452)
T 2gwn_A 272 LWFSDTDYGR---LGNRIKWNPA--IKKESDREALRAAVRNGRIDIIATDHAPHLLREKEGSCLQAASGGPLVQHSLLAL 346 (452)
T ss_dssp HHCCGGGHHH---HGGGGCCSSC--CCCHHHHHHHHHHHHHSSSCEEECCBCCCCHHHHCSCTTTSCCCCCCTTTHHHHH
T ss_pred hhcCHHHHhc---cCceEEECCC--CCCHHHHHHHHHHHHCCCceEEEeCCCCCChHHhcCChhhCCCCCccHHHHHHHH
Confidence 8899988865 5777778887 455 5678999999999999999999765321 23333 3333222
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+... ...+++++++++++|.|||++||++ ++|+|++|++|
T Consensus 347 ~~~~---------~~~~ls~~~~l~~~T~~~A~~lgl~-~~G~l~~G~~A 386 (452)
T 2gwn_A 347 LELC---------NQGIFSIEEIVSKTAHIPATLFAIE-KRGYIRPGYYA 386 (452)
T ss_dssp HHHH---------HTTSSCHHHHHHHHTHHHHHHHTBT-TCSSCCTTSBC
T ss_pred HHHH---------HcCCCCHHHHHHHHhHhHHHHcCCC-CCCcccCCCcC
Confidence 2110 1245999999999999999999998 57999999987
|
| >2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-28 Score=230.47 Aligned_cols=312 Identities=18% Similarity=0.174 Sum_probs=186.4
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++ ..+.+++|+|+||+|++|++. . +.++||++|++|+|||||+|+|+.....
T Consensus 2 ~~i~~~~v~~~~---~~~~~~~v~i~~g~I~~i~~~-~--------~~~~id~~g~~v~PG~iD~H~H~~~~~~------ 63 (426)
T 2z00_A 2 ILIRNVRLVDAR---GERGPADVLIGEGRILSLEGG-E--------AKQVVDGTGCFLAPGFLDLHAHLREPGE------ 63 (426)
T ss_dssp EEEEEEEEEETT---EEEEEEEEEEETTEEEESBCC-C--------CSEEEECTTCEEEECEEEEEECCCTTTC------
T ss_pred EEEEeeEEECCC---CceecceEEEECCEEEEEecC-C--------CceEEeCCCCEEecCEEEeccccCCCCC------
Confidence 589999999754 346788999999999999874 1 3589999999999999999999965210
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------CHHHHHHHHHHcC-CeEEEecccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLG-LRACLVQSTM 171 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------~~~~~~~~~~~~g-~~~~~~~~~~ 171 (400)
.| .++... ..+.++++|||++.+++.. ..+...+.++..+ ++.... ..+
T Consensus 64 ----~~-------------~~~~~~----~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 121 (426)
T 2z00_A 64 ----EV-------------KEDLFS----GLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPA-AAL 121 (426)
T ss_dssp ----TT-------------TCCHHH----HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCE-ECS
T ss_pred ----Cc-------------hHHHHH----HHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEE-EEe
Confidence 00 111111 2356899999999998632 1344556666666 564221 111
Q ss_pred cCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh
Q 015784 172 DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ 251 (400)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~ 251 (400)
. ........ ....++++. +.. .++.+.....+++.+.++++.|+++|+++.+|+.+......
T Consensus 122 ~------~~~~~~~~----~~~~~l~~~------g~~--~i~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~ 183 (426)
T 2z00_A 122 T------EKQEGKTL----TPAGLLREA------GAV--LLTDDGRTNEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRN 183 (426)
T ss_dssp B------GGGCSSSB----CCHHHHHHH------TCC--EEECTTSCCCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTT
T ss_pred e------cCCChhhH----HHHHHHHHc------CCE--EEECCCcCCCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhh
Confidence 1 11101111 112222221 111 13445556778999999999999999999999987554221
Q ss_pred HHh------hhcC-CCCC-------hHHHHhHhCC------CCCCeeeEEecCCC-hhHHHHHHhcCCeE--EECccccc
Q 015784 252 VVM------DTRK-VDHG-------TVTFLDKIEF------LQNNLLSAHTVWVN-HTEIGLLSRAGVKV--SHCPASAM 308 (400)
Q Consensus 252 ~~~------~~~~-~~~~-------~~~~l~~~~~------~~~~~~~~h~~~~~-~~~i~~~~~~~~~~--~~~p~~~~ 308 (400)
... ..++ .+.. ..+.+..... .+.+..+.|+.... .+.++++++.|+.+ .+||.+.+
T Consensus 184 ~~~~~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~~~~g~~~~i~H~~~~~~~~~i~~~~~~G~~v~~~~~p~~~~ 263 (426)
T 2z00_A 184 GVMNDGPLADLLGLPGNPPEAEAARIARDLEVLRYALRRSPATPRLHVQHLSTKRGLELVREAKRAGLPVTAEATPHHLT 263 (426)
T ss_dssp CSEECSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHHCSSCCCEEETTCCCHHHHHHHHHHHHTTCCEEEEECHHHHH
T ss_pred hhhccCccchhcccccCChHHHHHHHHHHHHHHhhccccccCCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEEchHHhE
Confidence 000 0000 0000 0011112222 45567788887533 35677788888664 46887543
Q ss_pred cc-----------cCcccH---------HHHHHcCCcEEEcCCCCCCCCCC--CHH---------HHHHHHHHHhccccc
Q 015784 309 RM-----------LGFAPI---------KEMLHADICVSLGTDGAPSNNRM--SIV---------DEMYLASLINKGREV 357 (400)
Q Consensus 309 ~~-----------~~~~~~---------~~~~~~Gv~v~~gtD~~~~~~~~--~~~---------~~~~~~~~~~~~~~~ 357 (400)
.. ...+|+ .+++++|+++++|||+.+..... +.| .+.+....+...
T Consensus 264 ~~~~~~~~~~~~~~~~~plr~~~~~~~l~~~l~~G~~~~lgsD~~p~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--- 340 (426)
T 2z00_A 264 LTEEALRTFDPLFKVAPPLRGEEDREALLEGLLDGTLDAIATDHAPHTLAEKEKDLLRAPFGIPSLEVAFPLLYTEL--- 340 (426)
T ss_dssp CCGGGGGGCCGGGCCSSCCCCHHHHHHHHHHHHHTSSCEECCCBCCCCTTGGGSCTTTSCCCBCCTTTHHHHHHHHT---
T ss_pred eCHhHhhccCceEEEeCCCCCHHHHHHHHHHHhCCCcEEEecCCCCCCHHHccCChhhCCCCcccHHHHHHHHHHHH---
Confidence 11 122333 35566999999999985432110 000 011111111100
Q ss_pred ccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 358 FANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 358 ~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.....+|++++++++|.|||++||++ +|+|++||.|
T Consensus 341 -----~~~~~ls~~~~l~~~T~n~A~~lgl~--~G~l~~G~~A 376 (426)
T 2z00_A 341 -----HLKRGFPLQRLVELFTDGPRRVLGLP--PLHLEEGAEA 376 (426)
T ss_dssp -----HHHHCCCHHHHHHHHTHHHHHHHTCC--CCCSSTTSBC
T ss_pred -----HHcCCCCHHHHHHHHhhhHHHHhCCC--cccccCCCCC
Confidence 01124999999999999999999996 6999999987
|
| >3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-27 Score=223.00 Aligned_cols=321 Identities=12% Similarity=0.094 Sum_probs=184.8
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|+++++ . .+++|+|+||+|++|++..+ +.++||++|++|+|||||+|+|+.....
T Consensus 1 m~~~i~~~~v~~~~~---~-~~~~v~I~~G~I~~i~~~~~--------~~~viD~~g~~v~PG~ID~H~H~~~~~~---- 64 (490)
T 3dc8_A 1 MSTVIKGGTIVTADL---T-YKADVKVEGGRIVEIGPNLS--------GAETLDATGCYVMPGGIDPHTHLEMPFM---- 64 (490)
T ss_dssp -CEEEESCEEECSSC---E-EECEEEEETTEEEEEESSCC--------CSEEEECTTCEEEECEEEEEECTTCEET----
T ss_pred CcEEEEccEEECCCC---c-eeeeEEEECCEEEEeccCCC--------CCeEEECCCCEEecCEEeeccccCCCCC----
Confidence 368999999998653 2 57899999999999997532 4689999999999999999999965211
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC----HHHHHHHHHH----cCCeEEEeccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH----VSEMAKAVEL----LGLRACLVQST 170 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~----~~~~~~~~~~----~g~~~~~~~~~ 170 (400)
...+.++.+..+ +.++++|+|++.++.... .....+.... ..+........
T Consensus 65 -----------------~~~~~e~~~~~~----~aa~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~~~ 123 (490)
T 3dc8_A 65 -----------------GTYSSDDFESGT----RAALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMAI 123 (490)
T ss_dssp -----------------TEECSCCHHHHH----HHHHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEEEC
T ss_pred -----------------CCCCHHHHHHHH----HHHHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEEEE
Confidence 112233333333 557899999999974222 2222222222 12222111111
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
.. .....+.+..++.+ ..+...++.++..+.....+++.|.++++.+++.|+++.+|+. +....
T Consensus 124 -------~~-----~~~~~l~el~~l~~---~~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~HaE-~~~~i 187 (490)
T 3dc8_A 124 -------TW-----WGEQVFNEMETIVK---DKGINTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLVHAE-NGDVV 187 (490)
T ss_dssp -------CS-----CSHHHHHHHHHHHH---HSCCCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEEECS-CHHHH
T ss_pred -------ec-----CcHHHHHHHHHHHH---hCCCCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEEecC-ChHHH
Confidence 00 11222333333331 2333456766666666777899999999999999999999964 43322
Q ss_pred hHHhh-hcCCCC----------C------hH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCCeEE--ECccccc-
Q 015784 251 QVVMD-TRKVDH----------G------TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVKVS--HCPASAM- 308 (400)
Q Consensus 251 ~~~~~-~~~~~~----------~------~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~~~--~~p~~~~- 308 (400)
..... ....+. - .+ +.+......+.+..+.|..... -+.++.+++.|+.++ +||....
T Consensus 188 ~~~~~~~~~~g~~~~~~~~~~rP~~~E~~av~r~i~la~~~g~~lhi~HvSt~~~~~li~~ak~~G~~Vt~e~~ph~l~l 267 (490)
T 3dc8_A 188 AQLQAKLLAEGNSGPEAHAYSRPAEVEGEAANRAIMIADMAGCPVYIVHTSCEQAHEAIRRARAKGMRVFGEPLIQHLTL 267 (490)
T ss_dssp HHHHHHHHHTTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEESSCCSHHHHHHHHHHHHTTCCEEECCBHHHHHC
T ss_pred HHHHHHHHhcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHCCCeEEEEEchHHhee
Confidence 21110 000000 0 01 1111111223334444433211 234566666776654 4553210
Q ss_pred ---c-----------c---------cCcccHHHHHHcCCcEEEcCCCCCCCCCC------CHHH--------HHHHHHHH
Q 015784 309 ---R-----------M---------LGFAPIKEMLHADICVSLGTDGAPSNNRM------SIVD--------EMYLASLI 351 (400)
Q Consensus 309 ---~-----------~---------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~------~~~~--------~~~~~~~~ 351 (400)
. . .....+.+.++.|...+++|||.+..... ++.. +.++...+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~Pplr~~~d~~aL~~~l~~G~id~i~sDh~p~~~~~K~~g~~~f~~~~~G~~gle~~l~~~~ 347 (490)
T 3dc8_A 268 DETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRMPMLW 347 (490)
T ss_dssp CGGGGGCSCHHHHHHTCCSSCCCCGGGHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHH
T ss_pred CHHHhcCcCcccCCceEECCCCCChHHHHHHHHHHhcCCceEEECCCCCCCHHHhhccCCChhhCCCChHHHHHHHHHHH
Confidence 0 0 11223556678899999999997652100 0000 00111111
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.. .....+++++++++++|.|||++||+++++|+|++|+.|
T Consensus 348 ~~--------~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~l~~G~~A 388 (490)
T 3dc8_A 348 TY--------GVATGRITMNEFVAVTSTNIAKILNIYPKKGAILVGADA 388 (490)
T ss_dssp HH--------HTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBC
T ss_pred HH--------HHHcCCCCHHHHHHHHHHHHHHHhCCCCCCCccCCCCcC
Confidence 10 013456999999999999999999997778999999987
|
| >3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.1e-28 Score=227.45 Aligned_cols=316 Identities=17% Similarity=0.180 Sum_probs=183.0
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecC--ChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQ--SADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~--~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~ 95 (400)
+++++|+|++|+++++ . .+++|+|+||+|++|++ ..+ ..+.++||++|++|+|||||+|+|+.....
T Consensus 5 ~~~~~i~~~~v~~~~~---~-~~~~v~i~~g~I~~i~~~~~~~------~~~~~~id~~g~~v~PG~ID~H~H~~~~~~- 73 (448)
T 3hm7_A 5 RFDLIIRSSTVVTETT---T-YRADVAIRNGIVSAITEPGSIS------SDDGPAIDGTGLHLFPGMVDVHVHFNEPGR- 73 (448)
T ss_dssp CCSEEEEEEEEECSSC---E-EEEEEEEETTEEEEEESTTCSC------TTSSCEEECTTCEEEECEEEEEECCCTTTS-
T ss_pred cccEEEEeeEEECCCC---c-eEeEEEEECCEEEEeeCccCCC------CCCCeEEECCCCEEecCEEEeeeccCCCCC-
Confidence 4678999999998653 2 67899999999999998 322 235689999999999999999999965110
Q ss_pred cccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cC-----CHHH---HHHHHHHcC-CeEE
Q 015784 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQ-----HVSE---MAKAVELLG-LRAC 165 (400)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~-----~~~~---~~~~~~~~g-~~~~ 165 (400)
...++... ..+.+++.|+|++.+++ .. ..+. ..+.+.... +...
T Consensus 74 ----------------------~~~~~~~~----~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (448)
T 3hm7_A 74 ----------------------TEWEGFAS----GSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYR 127 (448)
T ss_dssp ----------------------GGGCCSHH----HHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEE
T ss_pred ----------------------CcHhHHHH----HHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEE
Confidence 00011111 22568899999999986 21 2222 222222222 2322
Q ss_pred EecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeecccc---ccCCHHHHHHHHHHHHHcCCeeeEe
Q 015784 166 LVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQI---MNATDRLLLETRDMAREFKTGIHMH 242 (400)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~e~l~~~~~~a~~~~~~v~~H 242 (400)
..... .+. . .....++.+ .+...++.++..... ...+++.+.+.++.+++.|+++.+|
T Consensus 128 ~~~~~-------~~~-----~---~~~l~~l~~----~g~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH 188 (448)
T 3hm7_A 128 FWGGL-------VPG-----N---IDHLQDLHD----GGVIGFKAFMSECGTDDFQFSHDETLLKGMKKIAALGSILAVH 188 (448)
T ss_dssp EEEEC-------CTT-----C---GGGHHHHHH----TTCSEEEEESSSCSSSSSCCCCHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEEe-------ccc-----C---HHHHHHHHH----cCCCEEEEeeccccCCccCcCCHHHHHHHHHHHHhcCCEEEEE
Confidence 21111 000 0 112222222 222234433332211 3458889999999999999999999
Q ss_pred cCCCchhhhHHhhhcCCCC--------------------ChHHHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCCe--
Q 015784 243 VAEIPYENQVVMDTRKVDH--------------------GTVTFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK-- 299 (400)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~--------------------~~~~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~-- 299 (400)
+.+..............+. ..++..... +.+..+.|..... -+.++++++.|+.
T Consensus 189 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~~~la~~~---g~~~~i~H~s~~~~~~~i~~ak~~G~~v~ 265 (448)
T 3hm7_A 189 AESNEMVNALTTIAIEEQRLTVKDYSEARPIVSELEAVERILRFAQLT---CCPIHICHVSSRKVLKRIKQAKGEGVNVS 265 (448)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHH---TCCEEECCCCCHHHHHHHHHHHHTTCCEE
T ss_pred eCCHHHHHHHHHHHHhcCCcChhhccccCCHHHHHHHHHHHHHHHHHh---CCCEEEEeCCCHHHHHHHHHHHhcCCCEE
Confidence 9754422110000000000 011222222 3344455543211 2445666666654
Q ss_pred EEECccccc-------------------cc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCC----HHH--------HHHH
Q 015784 300 VSHCPASAM-------------------RM-LGFAPIKEMLHADICVSLGTDGAPSNNRMS----IVD--------EMYL 347 (400)
Q Consensus 300 ~~~~p~~~~-------------------~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~----~~~--------~~~~ 347 (400)
+.+||.... +. ....++.++++.|+.++++||+.+.+.... +.. +...
T Consensus 266 ~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~~~~i~tD~~p~~~~~k~~~~~~~~~~G~~g~e~~l 345 (448)
T 3hm7_A 266 VETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAGEIDLISSDHSPSLPQMKTGKTIFEVWGGIAGCQNTL 345 (448)
T ss_dssp EEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHHHHHTCCCEECCCBCCCCGGGGCCSSTTTSCCCBCCTTTHH
T ss_pred EEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHHHhcCCccEEEeCCCCCCHHHcccCCHhhCCCCCccHHHHH
Confidence 667774321 00 122356677888999999999876532110 000 1122
Q ss_pred HHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 348 ASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
...+.+. ....+++++++++++|.|||+++|+++++|+|++|+.|
T Consensus 346 ~~~~~~~--------~~~~~l~~~~~~~~~t~~~A~~~g~~~~~g~l~~G~~A 390 (448)
T 3hm7_A 346 AVMLTEG--------YHKRKMPLTQIVQLLSTEPAKRFGLYPQKGTIQVGAEA 390 (448)
T ss_dssp HHHHHHT--------TTTTCCCHHHHHHHHTHHHHHHHTCTTTSSCCSTTSBC
T ss_pred HHHHHHH--------HhcCCcCHHHHHHHHhHHHHHHcCCCCCCCcccCCCcC
Confidence 2222111 13456999999999999999999998778999999987
|
| >3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.96 E-value=8.7e-28 Score=228.01 Aligned_cols=318 Identities=15% Similarity=0.155 Sum_probs=177.4
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+.+++|+|++|+++++ ..+++|+|+||+|++|++..+. ..++||++|++|+|||||+|+|+.....
T Consensus 22 ~~~~~i~~~~v~~~~~----~~~~~v~i~~g~I~~i~~~~~~-------~~~~id~~g~~v~PG~iD~H~H~~~~g~--- 87 (473)
T 3e74_A 22 SFDLIIKNGTVILENE----ARVVDIAVKGGKIAAIGQDLGD-------AKEVMDASGLVVSPGMVDAHTHISEPGR--- 87 (473)
T ss_dssp CEEEEEESCEEECSSC----EEECEEEEETTEEEEEESCCCC-------EEEEEECTTCEEEECEEEEEECC--------
T ss_pred cCCEEEEeeEEECCCC----ceeeeEEEECCEEEEEcCCCCC-------CCcEEECCCCEEecCEEEEecccCCCCC---
Confidence 3578999999998653 3578999999999999986431 2589999999999999999999965210
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-cCC-----HHHHH---HHHHHcCCeEEEec
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG-GQH-----VSEMA---KAVELLGLRACLVQ 168 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~-~~~-----~~~~~---~~~~~~g~~~~~~~ 168 (400)
...++... ..+.++++|+|++.++. ... .+... +.+.....-.+...
T Consensus 88 --------------------~~~~~~~~----~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~ 143 (473)
T 3e74_A 88 --------------------SHWEGYET----GTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQL 143 (473)
T ss_dssp ------------------------CHHH----HHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEEC
T ss_pred --------------------CcHHHHHH----HHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEE
Confidence 01111111 23568999999999986 221 22222 22211111111111
Q ss_pred ccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEee-------ccccccCCHHHHHHHHHHHHHcCCeeeE
Q 015784 169 STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFG-------IRQIMNATDRLLLETRDMAREFKTGIHM 241 (400)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~e~l~~~~~~a~~~~~~v~~ 241 (400)
... .. ..+....++.+ .+...++.++. ++.....+++.+.++++.+++.|+++.+
T Consensus 144 ~~~------~~--------~~~~~l~~l~~----~G~~~~K~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 205 (473)
T 3e74_A 144 GGL------VS--------YNIDRLHELDE----VGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLV 205 (473)
T ss_dssp EEC------CT--------TCTTTHHHHHH----HTCSCEEEEC------------CCCCHHHHHHHHHHHHHHTCCEEE
T ss_pred eec------cc--------chHHHHHHHHH----cCCCEEEEeccccCCcccccccCCCCHHHHHHHHHHHHhcCCeEEE
Confidence 100 00 00111222222 12234555543 2345667889999999999999999999
Q ss_pred ecCCCchhhhHHhhh--cC--------CCCC------hH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCCe--EE
Q 015784 242 HVAEIPYENQVVMDT--RK--------VDHG------TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK--VS 301 (400)
Q Consensus 242 H~~~~~~~~~~~~~~--~~--------~~~~------~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~--~~ 301 (400)
|+.+........... .+ ..+- .+ +.+......+.+..+.|..... -+.++.+++.|+. +.
T Consensus 206 H~e~~~~~~~~~~~~~~~g~~~~~~~~~~~p~~~e~~av~~~l~la~~~g~~lhi~Hvst~~~l~li~~ak~~G~~vt~e 285 (473)
T 3e74_A 206 HCENALICDELGEEAKREGRVTAHDYVASRPVFTEVEAIRRVLYLAKVAGCRLHVCHVSSPEGVEEVTRARQEGQDITCE 285 (473)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCSHHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEECSCCSHHHHHHHHHHHHTTCCEEEE
T ss_pred EecCHHHHHHHhhHHHhcCCcChhhcccCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHcCCCeEEE
Confidence 987542211000000 00 0000 01 1111111222344444443311 1445666666655 55
Q ss_pred ECccccc-----------cc---------cCcccHHHHHHcCCcEEEcCCCCCCCCCCC---H--------HHHHHHHHH
Q 015784 302 HCPASAM-----------RM---------LGFAPIKEMLHADICVSLGTDGAPSNNRMS---I--------VDEMYLASL 350 (400)
Q Consensus 302 ~~p~~~~-----------~~---------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~---~--------~~~~~~~~~ 350 (400)
+||.... .. .....+.++++.|++++++||+.+...... + -.+......
T Consensus 286 ~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~~~~i~tDh~p~~~~~k~~~f~~~~~G~~g~e~~l~~~ 365 (473)
T 3e74_A 286 SCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMKAGNIMKAWGGIAGLQSCMDVM 365 (473)
T ss_dssp ECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHHHHHHHTTCCCEECCCBCCCCTTTTCSCTTTSCCCBCCGGGHHHHH
T ss_pred EchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHhCCCCcEEEeCCCCCCHHHcccChhhcCCCcccHHhHHHHH
Confidence 6774321 00 112245667789999999999986532100 0 001111111
Q ss_pred HhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 351 INKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 351 ~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+... ....+++++++++++|.|||++||+++ +|+|++|+.|
T Consensus 366 ~~~~--------~~~~~~~~~~~~~~~t~~~a~~~g~~~-~G~l~~G~~A 406 (473)
T 3e74_A 366 FDEA--------VQKRGMSLPMFGKLMATNAADIFGLQQ-KGRIAPGKDA 406 (473)
T ss_dssp HHHH--------TTTTCCCHHHHHHHHTHHHHHHTTCTT-SSCCSTTSBC
T ss_pred HHHH--------HHcCCCCHHHHHHHHhHHHHHHhCCCC-CCccCCCCcc
Confidence 1100 124569999999999999999999985 6999999987
|
| >3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.3e-28 Score=226.48 Aligned_cols=326 Identities=16% Similarity=0.142 Sum_probs=179.0
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIAD 99 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~ 99 (400)
.++|+|++|+|+. .++++++++|+|+||||++||+..+. .+.+.++||++|++|+|||||+|+|+......+...
T Consensus 3 ~~aI~narviD~~-~g~~i~~~~V~I~dG~I~~Ig~~~~~----~~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~ 77 (403)
T 3mtw_A 3 IKAVSAARLLDVA-SGKYVDNPLVIVTDGRITSIGKKGDA----VPAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYN 77 (403)
T ss_dssp EEEEEEEEEEETT-TTEEEESEEEEEETTEEEEEEETTCC----CCTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGG
T ss_pred cEEEEceEEEECC-CCcEecCcEEEEECCEEEEEeCCCCC----CCCCCEEEECCCCEEEeChheeeeCCccccccCccc
Confidence 3589999999864 34678999999999999999986543 124679999999999999999999987533221111
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHH-HHHHHc-CC--eEEEecccc--cC
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMA-KAVELL-GL--RACLVQSTM--DC 173 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~-~~~~~~-g~--~~~~~~~~~--~~ 173 (400)
. ...................+..++++..+.+........ ...... .. ......... ..
T Consensus 78 ~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (403)
T 3mtw_A 78 S---------------LEYSDRFWSVVQTANAKKTLEAGFTTVRNVGAADYDDVGLREAIDAGYVPGPRIVTAAISFGAT 142 (403)
T ss_dssp G---------------GGSCHHHHHHHHHHHHHHHHHTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEECCSCEEST
T ss_pred c---------------ccccHHHHhhhhhhhhhhccccccceeeccccccccchhhhhhhhccccccccccccccccccc
Confidence 0 011111111222223455778899998887643322221 111111 11 111111000 00
Q ss_pred CCCC-----Cccc--ccCCchHHHHHHHHHHHHhccCCCCCeEEEe--------eccccccCCHHHHHHHHHHHHHcCCe
Q 015784 174 GEGL-----PASW--AVRTTDDCIQSQKELYAKHHHAADGRIRIWF--------GIRQIMNATDRLLLETRDMAREFKTG 238 (400)
Q Consensus 174 ~~~~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~e~l~~~~~~a~~~~~~ 238 (400)
.... .... ............................... ..........+.+..+++.+++.+.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 222 (403)
T 3mtw_A 143 GGHCDSTFFPPSMDQKNPFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIK 222 (403)
T ss_dssp TSTTSCCSSCGGGCCCCTTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCE
T ss_pred cccccccccccccccccccccchhHHHhhhhHhhhhhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCe
Confidence 0000 0000 0000111111111111111111111111111 11123455678899999999999999
Q ss_pred eeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECcc-------------
Q 015784 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPA------------- 305 (400)
Q Consensus 239 v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~------------- 305 (400)
+.+|............ .+. ....+......................+.
T Consensus 223 ~~~~~~~~~~~~~~~~---------------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (403)
T 3mtw_A 223 VAAHAHGASGIREAVR---------------AGV----DTIEHASLVDDEGIKLAVQKGAYFSMDIYNTDYTQAEGKKNG 283 (403)
T ss_dssp EEEEECSHHHHHHHHH---------------TTC----SEEEECTTCCHHHHHHHHHHTCEEECCCSTHHHHHHHHHHHT
T ss_pred EEEEeccchhHHHHHH---------------hcc----cccccccccccchhhhhccccceeeeeeccchhhhhhhhccc
Confidence 9999876543222111 111 01122222222222222222222222111
Q ss_pred --------ccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 015784 306 --------SAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (400)
Q Consensus 306 --------~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~ 376 (400)
..... ....+.+.+.+.|+.+++|||.+.. ....++.++..+. +.++|++|+|++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gt~~~~~-~~~~~~~~~~~~~---------------~~gls~~eal~~ 347 (403)
T 3mtw_A 284 VLEDNLRKDRDIGELQRENFRKALKAGVKMVYGTDAGIY-PHGDNAKQFAVMV---------------RYGATPLQAIQS 347 (403)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHTCEEECCCCBTTB-CTTCGGGHHHHHH---------------HTTCCHHHHHHH
T ss_pred cchhhccccccccccccchhhHHHhcCCeEeeccCCccc-ccchHHHHHHHHH---------------HcCCCHHHHHHH
Confidence 11111 2234678889999999999998755 3345666666544 235999999999
Q ss_pred HhHHHHHHcCCCCCccccccCcCC
Q 015784 377 ATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 377 ~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+|.|||++||+++++|+|++||+|
T Consensus 348 ~T~npA~~lgl~~~~GsI~~G~~A 371 (403)
T 3mtw_A 348 ATLTAAEALGRSKDVGQVAVGRYG 371 (403)
T ss_dssp TTHHHHHHHTCTTTSSSCCTTSBC
T ss_pred HHHHHHHHhCCCCCceeeCCCCcc
Confidence 999999999999999999999998
|
| >3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.9e-27 Score=223.92 Aligned_cols=318 Identities=15% Similarity=0.174 Sum_probs=186.8
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccccc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIA 98 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~ 98 (400)
++++|+|++|++.++ .+.+++|+|+||+|++|++..+ ..+.++||++|++|+|||||+|+|+....
T Consensus 1 m~~~i~~~~v~~~~~---~~~~~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~iD~H~H~~~~~----- 66 (428)
T 3mpg_A 1 MNYLFKNGRYMNEEG---KIVATDLLVQDGKIAKVAENIT------ADNAEVIDVNGKLIAPGLVDVHVHLREPG----- 66 (428)
T ss_dssp CEEEEEEEEEECSSS---CEEEEEEEEESSBEEECCSSCC------CTTSEEEECTTCEEEECEEEEEECCCTTT-----
T ss_pred CcEEEEeeEEEeCCC---CeeeeeEEEECCEEEEecCCCC------CCCCeEEECCCCEEeeCEEEEeeccCCCC-----
Confidence 368999999997332 4578899999999999998643 13578999999999999999999985411
Q ss_pred CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-----C---HHHHHHHHHHcCCeEEEeccc
Q 015784 99 DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----H---VSEMAKAVELLGLRACLVQST 170 (400)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-----~---~~~~~~~~~~~g~~~~~~~~~ 170 (400)
....++... ..+.++++|+|++.++... . .....+.++..+.+.+.....
T Consensus 67 ------------------~~~~~~~~~----~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (428)
T 3mpg_A 67 ------------------GEHKETIET----GTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGA 124 (428)
T ss_dssp ------------------CTTTCCHHH----HHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEE
T ss_pred ------------------CCchhHHHH----HHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEee
Confidence 011122222 2355788999999997421 1 334455666666555444333
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+..+. ..... ....++.+. +... +..+..+..+++.+.++++.+++.|+++.+|+.+.....
T Consensus 125 ~~~~~------~~~~l----~~~~~l~~~------G~~~--~~~~~~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~ 186 (428)
T 3mpg_A 125 ITVRQ------AGSEM----TDFETLKEL------GAFA--FTDDGVGVQDASMMLAAMKRAAKLNMAVVAHCEENTLIN 186 (428)
T ss_dssp SBGGG------CSSSB----CCHHHHHHT------TCCC--EECTTSCCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCT
T ss_pred EecCC------CcchH----HHHHHHHHh------CCEE--EECCCcCCCCHHHHHHHHHHHHhcCCeEEEECCChhHhh
Confidence 22210 00001 111222211 1222 244556678899999999999999999999997653211
Q ss_pred hHHh------hhcC-CCC-C-----hH-HHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCCeE--EECccccc-----
Q 015784 251 QVVM------DTRK-VDH-G-----TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVKV--SHCPASAM----- 308 (400)
Q Consensus 251 ~~~~------~~~~-~~~-~-----~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~~--~~~p~~~~----- 308 (400)
.... ..++ .+. . .+ +.+......+.+..+.|+.... -+.++.+++.|+.+ .+||....
T Consensus 187 ~~~~~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~g~~~~i~H~s~~~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~ 266 (428)
T 3mpg_A 187 KGCVHEGKFSEKHGLNGIPSVCESVHIARDILLAEAADCHYHVCHVSTKGSVRVIRDAKRAGIKVTAEVTPHHLVLCEDD 266 (428)
T ss_dssp TCSEETTHHHHHTTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEECBCHHHHHCCGGG
T ss_pred hHHhhcCccchhhCcCCCCHHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHhcCCCEEEEEchHHhEECHHH
Confidence 0000 0000 000 0 01 1111112223345555554321 24466667777664 44664211
Q ss_pred --------cc-------cCcccHHHHHHcCCcEEEcCCCCCCCCCCCH---H--------HHHHHHHHHhcccccccCCC
Q 015784 309 --------RM-------LGFAPIKEMLHADICVSLGTDGAPSNNRMSI---V--------DEMYLASLINKGREVFANGT 362 (400)
Q Consensus 309 --------~~-------~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~~ 362 (400)
+. ....++.+++..|+.++++||+.+.+..... + -+......+...
T Consensus 267 ~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i~~i~tDh~p~~~~~k~~~~~~~p~g~~g~e~~~~~~~~~~-------- 338 (428)
T 3mpg_A 267 IPSADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDHAPHTAEEKAQGIERAPFGITGFETAFPLLYTNL-------- 338 (428)
T ss_dssp CCSSCGGGCCSSCCCCHHHHHHHHHHHHHTSSCCBCCCBCCCCTTGGGSCTTTSCSCCCCTTTHHHHHHHHT--------
T ss_pred HhCCCCeEEEeCCCCCHHHHHHHHHHHhCCCCcEEEcCCCCCCHHHcccCHhhCCCCceehhhHHHHHHHHH--------
Confidence 00 1122456678889999999998865321100 0 011111111110
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 363 TDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 363 ~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||++||++ .|+|++|+.|
T Consensus 339 ~~~~~~~~~~~~~~~t~~~a~~~g~~--~g~i~~G~~A 374 (428)
T 3mpg_A 339 VKKGIITLEQLIQFLTEKPADTFGLE--AGRLKEGRTA 374 (428)
T ss_dssp TTTTSSCHHHHHHTTTHHHHHHHTCS--CSCCCTTSBC
T ss_pred HHcCCCCHHHHHHHHhHHHHHHhCCC--CccccCCCcC
Confidence 12346999999999999999999996 6999999987
|
| >2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=8e-27 Score=225.35 Aligned_cols=330 Identities=15% Similarity=0.144 Sum_probs=182.0
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+.+++|+|++|++++. ..+++|+|+||+|++|++..+.+... ..+.++||++|++|+|||||+|+|+.....
T Consensus 26 ~~~~lI~ng~Vv~~~~----~~~~dV~I~dGrI~~Ig~~~~~~~~~-~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~--- 97 (541)
T 2vr2_A 26 PSRLLIRGGRVVNDDF----SEVADVLVEDGVVRALGHDLLPPGGA-PAGLRVLDAAGKLVLPGGIDTHTHMQFPFM--- 97 (541)
T ss_dssp -CEEEEESCEEECSSC----EEECEEEEETTEEEEEEC------------CEEEECTTSEEEECEEEEEECTTCBCS---
T ss_pred cCCEEEECcEEEcCCC----ceEeeEEEECCEEEEeccCCCCCccc-ccCceEEECCCCEEccCEEEecccCCCCCC---
Confidence 4689999999997542 35689999999999999854321100 012389999999999999999999965210
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc----CCHHHHHHHHHHcCCeEEEecccccC
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDC 173 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~ 173 (400)
...+.++.+.. .+.++++|||++.++.. .......+........ ..+.+.
T Consensus 98 ------------------~~~~~e~~~~~----~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~~----~~~~~~ 151 (541)
T 2vr2_A 98 ------------------GSRSIDDFHQG----TKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADP----KVCCDY 151 (541)
T ss_dssp ------------------SSBCSCCTTHH----HHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHTT----TCSSEE
T ss_pred ------------------CCcCHHHHHHH----HHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhcc----CceEEE
Confidence 11122222222 24578999999998642 2222222222111000 000000
Q ss_pred CCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHH
Q 015784 174 GEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV 253 (400)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~ 253 (400)
+..... .........+..++++ ..+...++.+..++..+..+++.+.++++.++++++++++|+.+........
T Consensus 152 g~h~~~---~~~~~~~~~el~~l~~---~~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~ 225 (541)
T 2vr2_A 152 SLHVAV---TWWSDQVKEEMKILVQ---DKGVNSFKMFMAYKDLYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGA 225 (541)
T ss_dssp EEEEEE---CSCSHHHHHHHHHHHH---TSCCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH
T ss_pred eeeecc---cCCCHHHHHHHHHHHH---hCCCCEEEEEeccCCccCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH
Confidence 000000 0001222333333332 2234456777767777788999999999999999999999994332111111
Q ss_pred h--hhcCCCC---------ChHHHHhH------hCCCCCCeeeEEecC-CChhHHHHHHhcCCeEEECccccccc--c--
Q 015784 254 M--DTRKVDH---------GTVTFLDK------IEFLQNNLLSAHTVW-VNHTEIGLLSRAGVKVSHCPASAMRM--L-- 311 (400)
Q Consensus 254 ~--~~~~~~~---------~~~~~l~~------~~~~~~~~~~~h~~~-~~~~~i~~~~~~~~~~~~~p~~~~~~--~-- 311 (400)
. ...+... ..++.+.. ....+.+..+.|... ...+.++.+++.|+.+.. +.....+ .
T Consensus 226 ~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~~~~h~ss~~~~~~i~~ar~~G~~v~~-e~~~~~L~~d~~ 304 (541)
T 2vr2_A 226 KKMLALGITGPEGHELCRPEAVEAEATLRAITIASAVNCPLYIVHVMSKSAAKVIADARRDGKVVYG-EPIAASLGTDGT 304 (541)
T ss_dssp HHHHHTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHHTCCEEEEEECCHHHHHHHHHHHHTTCCEEE-EEBHHHHHCCSG
T ss_pred HHHHHcCCCChhhccccchhHHHHHHHHHHHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHcCCeEEE-EeehhhhcCCHH
Confidence 1 1111100 01111110 112233445556532 112335567778876532 3221110 0
Q ss_pred --------------Cccc----------HHHHHHcCCcEEEcCCCCCCCCCCCHHHH------------------HHHHH
Q 015784 312 --------------GFAP----------IKEMLHADICVSLGTDGAPSNNRMSIVDE------------------MYLAS 349 (400)
Q Consensus 312 --------------~~~~----------~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~------------------~~~~~ 349 (400)
-.+| +.+++..|+..++|||+.++. +... .++..
T Consensus 305 ~~~~~~~~~~~~~~~~pplr~~~~~~~~l~~~l~~g~~~~~gtD~~~~~----~~~k~~~~~~~~~~p~G~~G~e~~l~~ 380 (541)
T 2vr2_A 305 HYWNKEWHHAAHHVMGPPLRPDPSTPDFLMNLLANDDLTTTGTDNCTFN----TCQKALGKDDFTKIPNGVNGVEDRMSV 380 (541)
T ss_dssp GGGCSSHHHHHTTCCSSCCCSCTTHHHHHHHHHHTTSSCCCBCCBCCCC----HHHHGGGSSCGGGSCCCBCCTTTHHHH
T ss_pred HhcCccccccCceEECCCCCCCcchHHHHHHHHhcCCeEEEEeCCCCCC----hHHhcccCCChhhCCCCCccHHHHHHH
Confidence 0112 445788999999999987642 1110 01111
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+... ....+++++++++++|.|||++||+++++|+|++|++|
T Consensus 381 ~~~~~--------v~~~~l~~~~~~~~~T~~pA~~lgl~~~~G~i~~G~~A 423 (541)
T 2vr2_A 381 IWEKG--------VHSGKMDENRFVAVTSTNAAKIFNLYPRKGRIAVGSDA 423 (541)
T ss_dssp HHHHH--------TTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBC
T ss_pred HHHHH--------HHcCCCCHHHHHHHHhHHHHHHhCCCCCCCccCCCCCC
Confidence 11100 12345999999999999999999998778999999987
|
| >3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-26 Score=217.08 Aligned_cols=312 Identities=15% Similarity=0.123 Sum_probs=184.7
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++ + ..+.+++|+|+||+|++|++..+. ..+.++||++|++|+|||||+|+|+....
T Consensus 2 ~~i~~~~v~~-~---~~~~~~~v~i~~g~I~~i~~~~~~-----~~~~~~id~~g~~v~PG~iD~H~H~~~~g------- 65 (424)
T 3gri_A 2 KLIKNGKVLQ-N---GELQQADILIDGKVIKQIAPAIEP-----SNGVDIIDAKGHFVSPGFVDVHVHLREPG------- 65 (424)
T ss_dssp EEEESCEEEE-T---TEEEECEEEEETTEEEEEESCCCC-----CSSCEEEECTTCEEEECEEEEEECCCTTT-------
T ss_pred EEEEeeEEEc-C---CCceeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEEeCeEEeeecCCCCC-------
Confidence 6899999998 3 356788999999999999986432 23578999999999999999999986421
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------CHHHHHHHHHHcCCeEEEeccccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------HVSEMAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~~~~ 172 (400)
....++... ..+.++++|+|++.++... ......+.+...+.+.+.....+.
T Consensus 66 ----------------~~~~~~~~~----~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (424)
T 3gri_A 66 ----------------GEYKETIET----GTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASIT 125 (424)
T ss_dssp ----------------CTTTCCHHH----HHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESB
T ss_pred ----------------CCCHHHHHH----HHHHHHhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEEe
Confidence 011122222 2355789999999998632 133445666666664443322222
Q ss_pred CCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhH
Q 015784 173 CGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQV 252 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~ 252 (400)
.+ ..... +....++. .. +.+. +..+..+..+++.+.++++.++++|+++.+|+.+.......
T Consensus 126 ~~------~~~~~----l~~l~~l~----~~--G~~~--~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~ 187 (424)
T 3gri_A 126 TR------QLGKE----LVDFPALV----KE--GAFA--FTDDGVGVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGG 187 (424)
T ss_dssp GG------GCSSS----BCCHHHHH----TT--TCCC--EEECSSCCCSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTC
T ss_pred cC------CCcch----HHHHHHHH----hc--CcEE--EecCCcCcCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhh
Confidence 11 00000 11112221 11 2222 24456677889999999999999999999999765421100
Q ss_pred -------HhhhcCCCCC-hHH------HHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcCCe--EEECcccccc------
Q 015784 253 -------VMDTRKVDHG-TVT------FLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVK--VSHCPASAMR------ 309 (400)
Q Consensus 253 -------~~~~~~~~~~-~~~------~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~--~~~~p~~~~~------ 309 (400)
.......+.. ..+ .+......+.+..+.|..... -+.++.+++.|+. +.+||.....
T Consensus 188 ~~~~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~g~~~~i~H~s~~~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~ 267 (424)
T 3gri_A 188 AMHEGKRSKELGIPGIPNICESVQIARDVLLAEAAGCHYHVCHVSTKESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIP 267 (424)
T ss_dssp CEESSHHHHHHTCCEECTHHHHHHHHHHHHHHHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCC
T ss_pred hhhcCccchhhCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCCHHHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHh
Confidence 0000000000 001 111112223345455554311 1345666666654 6677753210
Q ss_pred -----c---------cCcccHHHHHHcCCcEEEcCCCCCCCC---------------CCCHHHHHHHHHHHhcccccccC
Q 015784 310 -----M---------LGFAPIKEMLHADICVSLGTDGAPSNN---------------RMSIVDEMYLASLINKGREVFAN 360 (400)
Q Consensus 310 -----~---------~~~~~~~~~~~~Gv~v~~gtD~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~ 360 (400)
. .....+.++++.|+.+++|||+.+.+. +.... ....+...
T Consensus 268 ~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~~igtDhap~~~~~k~~~~~~~~~G~~g~e~~----~~~~~~~~------ 337 (424)
T 3gri_A 268 GNNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPHARDEKAQPMEKAPFGIVGSETA----FPLLYTHF------ 337 (424)
T ss_dssp SSCGGGCCSSCCCCHHHHHHHHHHHHTTSSCEECCCBCCCCHHHHTSCTTTSCCCCCCTTTH----HHHHHHHH------
T ss_pred CcCceEEEeCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccCCHhHCCCCCcccccc----HHHHHHHH------
Confidence 0 011235567788999999999965421 11111 11111100
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 361 ~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
....+++++++++++|.|||+++|+ + +|+|++|+.|
T Consensus 338 --~~~~~~~~~~~~~~~t~~~a~~~g~-~-~g~l~~G~~A 373 (424)
T 3gri_A 338 --VKNGDWTLQQLVDYLTIKPCETFNL-E-YGTLKENGYA 373 (424)
T ss_dssp --TTTSSCCHHHHHHHHTHHHHHHTTC-S-CSCCCTTSBC
T ss_pred --HHcCCCCHHHHHHHHhHHHHHHhCC-C-CCcccCCCcC
Confidence 1245699999999999999999999 3 6999999987
|
| >2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6 | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-27 Score=226.81 Aligned_cols=324 Identities=15% Similarity=0.151 Sum_probs=183.1
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+.+++|+|++|++++ . ..+++|+|+||+|++|++.... ..+.++||++|++|+|||||+|+|+....
T Consensus 7 ~~~~lI~n~~vv~~~---~-~~~~~V~I~dG~I~~Ig~~~~~-----~~~~~vIDa~G~~v~PGlID~H~H~~~~~---- 73 (521)
T 2ftw_A 7 TGTILIKNGTVVNDD---R-YFKSDVLVENGIIKEISKNIEP-----KEGIKVVDATDKLLLPGGIDTHTHFQLPF---- 73 (521)
T ss_dssp CCCEEEESCEEECSS---C-EEECEEEEETTEEEEEESCCCC-----CSSCCEEECTTCEEEECEEEEEECTTCEE----
T ss_pred cCCEEEECcEEECCC---C-ceeeeEEEECCEEEEecCCCCC-----CCCCeEEECCCCEEecCEEeeecccCcCC----
Confidence 457999999999754 2 3568999999999999975321 12458999999999999999999996521
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc----CCHHHHHHHHHHc--C-CeEEEeccc
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELL--G-LRACLVQST 170 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~----~~~~~~~~~~~~~--g-~~~~~~~~~ 170 (400)
....+.++.+.. .+.++++|||++.+++. .......+..... + ....+ ..
T Consensus 74 -----------------~~~~~~e~~~~~----~~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~--g~ 130 (521)
T 2ftw_A 74 -----------------MGTVSVDDFDIG----TQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKVNCDY--SL 130 (521)
T ss_dssp -----------------TTEECSSCHHHH----HHHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTCSSEE--EE
T ss_pred -----------------CCccCHHHHHHH----HHHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhhcCceeeE--ee
Confidence 011122333332 25578899999998642 2222222211111 1 10000 00
Q ss_pred ccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 171 MDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+.... .+ ......+..+++++ .+...+++++.++.....+++.+.++++.|+++|+++.+|+.+.....
T Consensus 131 h~~~~----~~----~~~~~~~l~~l~~~---~G~~~~k~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~ 199 (521)
T 2ftw_A 131 HVAIT----WW----SEQVSREMEILVKE---RGVNSFKCFMAYKNSFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVF 199 (521)
T ss_dssp EEECC----SC----CHHHHHHHHHHHHH---SCCCEEEEESSCTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHH
T ss_pred EEeec----CC----ChhHHHHHHHHHHh---CCCCEEEEEeccCCCcCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHH
Confidence 00110 01 11223333333322 233456766666666778999999999999999999999995432111
Q ss_pred hHHh--hhcCCCC---------ChHHHH------hHhCCCCCCeeeEEecCCCh----hHHHHHHhcCCeEEECcccccc
Q 015784 251 QVVM--DTRKVDH---------GTVTFL------DKIEFLQNNLLSAHTVWVNH----TEIGLLSRAGVKVSHCPASAMR 309 (400)
Q Consensus 251 ~~~~--~~~~~~~---------~~~~~l------~~~~~~~~~~~~~h~~~~~~----~~i~~~~~~~~~~~~~p~~~~~ 309 (400)
..+. ...|... ...+.+ ......+.+. |..+++. +.++++++.|+.+. ++.....
T Consensus 200 ~~~~~l~~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~~~~~p~---hi~h~ss~~~~~~i~~~r~~G~~v~-~e~~~~~ 275 (521)
T 2ftw_A 200 EGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVIADSVCTPV---YIVHVQSIGAADVICKHRKEGVRVY-GEPIAAG 275 (521)
T ss_dssp HHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCE---EECSCCCHHHHHHHHHHHHTTCCEE-ECCBHHH
T ss_pred HHHHHHHHcCCCChhhccccCcHHHHHHHHHHHHHHHHHhCCCE---EEEecCcHHHHHHHHHHHHcCCeEE-EEEcchh
Confidence 1111 1111100 011111 1111122233 4444432 34667778888753 2321110
Q ss_pred c------------------cCccc----------HHHHHHcCCcEEEcCCCCCCCCCC------CHH--------HHHHH
Q 015784 310 M------------------LGFAP----------IKEMLHADICVSLGTDGAPSNNRM------SIV--------DEMYL 347 (400)
Q Consensus 310 ~------------------~~~~~----------~~~~~~~Gv~v~~gtD~~~~~~~~------~~~--------~~~~~ 347 (400)
+ .-.+| +.+++..|...++|||+.+..... ++. .+.++
T Consensus 276 L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~l~~~l~~g~~~~~gsD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l 355 (521)
T 2ftw_A 276 LGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRM 355 (521)
T ss_dssp HHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHH
T ss_pred hccCHHHhcCCCcccCcceEEcCCCCCChhhHHHHHHHhcCCCEEEEEeCCCCCCHHHhhcccCChhhCCCCCccHHHHH
Confidence 0 00122 334788999999999986542000 000 00000
Q ss_pred HHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 348 ASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
...+.. .....+++++++++++|.|||++||+++++|+|++|++|
T Consensus 356 ~~~~~~--------~v~~~~l~~~~~~~~~t~~~A~~~gl~~~~G~i~~G~~A 400 (521)
T 2ftw_A 356 SIVWEN--------GVNTGKLTWCQFVRATSSERARIFNIYPRKGRIDVGCDG 400 (521)
T ss_dssp HHHHHH--------HTTTTSSCHHHHHHHHTHHHHHHTTCTTTSSCCSTTSBC
T ss_pred HHHHHH--------HHhcCCCCHHHHHHHhChhHHHHhCCCCCCCCcCCCCcC
Confidence 011100 012346999999999999999999998778999999987
|
| >3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A | Back alignment and structure |
|---|
Probab=99.95 E-value=2.2e-26 Score=223.25 Aligned_cols=300 Identities=21% Similarity=0.239 Sum_probs=182.1
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccccccc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKG 96 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~ 96 (400)
.+++++|+|++|+++.. ..+.+++|+|+||+|++|++... ...+.++||++|++|+|||||+|+|+...
T Consensus 33 ~~~dlli~n~~ivd~~~--~~~~~~dI~I~~G~I~~Vg~~~~-----~~~~~~vID~~G~~v~PG~ID~H~Hl~~~---- 101 (608)
T 3nqb_A 33 QRFDVLITGGTLVDVVT--GELRPADIGIVGALIASVHEPAS-----RRDAAQVIDAGGAYVSPGLIDTHMHIESS---- 101 (608)
T ss_dssp SCEEEEEESCEEECTTT--CCEEECEEEEETTEEEEEECTTS-----CCCEEEEEECTTSEEEECEEEEEECGGGG----
T ss_pred CCCCEEEECeEEEECCC--CeEEeeEEEEECCEEEEecCCCC-----CCCCCeEEeCCCCEEecCeEecccCcccc----
Confidence 45689999999997543 23456799999999999998542 12356899999999999999999999541
Q ss_pred ccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc--------CCHHHHHHHHHHcCCeEEEec
Q 015784 97 IADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG--------QHVSEMAKAVELLGLRACLVQ 168 (400)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~--------~~~~~~~~~~~~~g~~~~~~~ 168 (400)
.++.++ ..+.++.+|+|++.++.. ...+...+.++..+.+.+...
T Consensus 102 --------------------~~~~~~-------~~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~ 154 (608)
T 3nqb_A 102 --------------------MITPAA-------YAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLA 154 (608)
T ss_dssp --------------------TSCHHH-------HHHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEE
T ss_pred --------------------cCCHHH-------HHHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEec
Confidence 122222 225688999999997532 122334555656666655443
Q ss_pred -ccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 169 -STMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 169 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
.+...+..+... ..........++++ ....-.++.+..... ....++.+.+.++.|++.++++.+|+.+..
T Consensus 155 p~~~P~~~~~~~~----g~~~~~~el~~l~~---~~~v~glgE~~~~~~-v~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~ 226 (608)
T 3nqb_A 155 PSCVPSAPGLERG----GADFDAAILADLLS---WPEIGGIAEIMNMRG-VIERDPRMSGIVQAGLAAEKLVCGHARGLK 226 (608)
T ss_dssp CCCSSSSTTSCCC----SCCCCHHHHHHHHT---STTEEEEEEECCHHH-HHTTCHHHHHHHHHHHHHTCEEEECCTTCC
T ss_pred cccCCCCCccccC----cccCCHHHHHHHHh---ccCcceeeEeeccCC-cCCCcHHHHHHHHHHHHcCCEEEEcCCCCC
Confidence 333221111110 11111222223221 111011111121111 123456788888999999999999987544
Q ss_pred hhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHH----HcC
Q 015784 248 YENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEML----HAD 323 (400)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~G 323 (400)
.. .+..+...++. ..|+....++.++++ +.|..+.+. .+..+. ...+..++ ..|
T Consensus 227 ~~-------------~L~~~~~aGv~-----~~H~~~~~eea~e~l-~~G~~i~i~-gs~~~~--~~~l~~~i~~~~~~g 284 (608)
T 3nqb_A 227 NA-------------DLNAFMAAGVS-----SDHELVSGEDLMAKL-RAGLTIELR-GSHDHL--LPEFVAALNTLGHLP 284 (608)
T ss_dssp HH-------------HHHHHHHTTCC-----EECCCCSHHHHHHHH-HTTCEEEEE-SSSGGG--HHHHHHHHHHHTSCC
T ss_pred HH-------------HHHHHHHcCCC-----eeeccCCHHHHHHHH-HCCCEEEEe-cccccc--HHHHHHHHHhHhhcC
Confidence 32 22333333432 378887555555555 578887765 332221 12233333 379
Q ss_pred CcEEEcCCCCCCCC---CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 324 ICVSLGTDGAPSNN---RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 324 v~v~~gtD~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
++++++||+..+.+ ...+...++.+.. .+++++++++++|.|||++||++ ++|+|++|++|
T Consensus 285 ~~v~lgTD~~~p~~~~~~g~l~~~v~~~~~---------------~Gls~~eal~~aT~n~A~~lgl~-~~G~i~~G~~A 348 (608)
T 3nqb_A 285 QTVTLCTDDVFPDDLLQGGGLDDVVRRLVR---------------YGLKPEWALRAATLNAAQRLGRS-DLGLIAAGRRA 348 (608)
T ss_dssp TTEEEECBSCCHHHHHHTCSHHHHHHHHHH---------------TTCCHHHHHHHHTHHHHHHHTCT-TSSCCSTTSBC
T ss_pred ceEEEecCCCCCcchhhhcchHHHHHHHHH---------------cCCCHHHHHHHHHHHHHHHcCCC-CCcCcCCCCCc
Confidence 99999999753210 1123333443331 25999999999999999999995 47999999987
|
| >1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.5e-27 Score=228.66 Aligned_cols=349 Identities=18% Similarity=0.144 Sum_probs=180.0
Q ss_pred CCCCCCCCCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCc
Q 015784 8 GGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHV 87 (400)
Q Consensus 8 ~~~~~~~~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~ 87 (400)
-++-|++...+++++|+|++|+++++. .+.+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+
T Consensus 10 ~~~~~~~~~~~~~~~i~~~~v~~~~~~--~~~~~~v~i~~g~I~~i~~~~~------~~~~~~iD~~g~~v~PG~iD~H~ 81 (496)
T 1rk6_A 10 HGSMSQPDATPFDYILSGGTVIDGTNA--PGRLADVGVRGDRIAAVGDLSA------SSARRRIDVAGKVVSPGFIDSHT 81 (496)
T ss_dssp ----------CBSEEEESSEECCSSSC--CCEECEEEEETTEEEEEECCTT------SCBSCEEECTTCEEEECEEESSC
T ss_pred cccccCCCCCcccEEEECCEEEeCCCC--ceeccEEEEECCEEEEecCCCC------CCCCeEEeCCCCEEecCEeeeee
Confidence 355566666667899999999976432 4567899999999999997532 12458999999999999999999
Q ss_pred CCcccccccccC-------------------CCChh-HhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC-
Q 015784 88 HTSQQLAKGIAD-------------------DVDLM-TWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG- 146 (400)
Q Consensus 88 H~~~~~~~~~~~-------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~- 146 (400)
|+.....+.... ..++. +|+...+ +... +.++.+..+...+.+.++.|.+++....
T Consensus 82 H~~~~~~~~~~~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i-~~~~--~~~~~~~~~~~~~~e~~~~~~~~~~~~~~ 158 (496)
T 1rk6_A 82 HDDNYLLKHRDMTPKISQGVTTVVTGNCGISLAPLAHANPPAPL-DLLD--EGGSFRFARFSDYLEALRAAPPAVNAACM 158 (496)
T ss_dssp CCTTHHHHCTTCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTG-GGGC--SSSCCEESSHHHHHHHHHHSCCSSEEEEE
T ss_pred cCCccccccHHHHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhh-cccC--cccccCccCHHHHHHHHhccCCccceEEe
Confidence 997644332110 01111 1222111 1111 1111112222233445555554433210
Q ss_pred -c---------------CC---H---HHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCC
Q 015784 147 -G---------------QH---V---SEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA 204 (400)
Q Consensus 147 -~---------------~~---~---~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (400)
+ .. . ....+.+.+.|...+........+ ..... .+..+.++.+...
T Consensus 159 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~-------~~~~~----~el~~~~~~a~~~- 226 (496)
T 1rk6_A 159 VGHSTLRAAVMPDLRREATADEIQAMQALADDALASGAIGISTGAFYPPA-------AHAST----EEIIEVCRPLITH- 226 (496)
T ss_dssp EEHHHHHHHHCSCCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGGG-------TTCCH----HHHHHHHTHHHHH-
T ss_pred cccccceeeeccccccCCCHHHHHHHHHHHHHHHHcCCcEEeeccccCCC-------CCCCH----HHHHHHHHHHHHc-
Confidence 0 01 1 122333335566543221111000 00011 2222222222222
Q ss_pred CCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeE-ecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCe------
Q 015784 205 DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL------ 277 (400)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------ 277 (400)
+ ..+..+.........+.+.++++++++.|+++++ |+.+.... .++.....++.+......+ +.
T Consensus 227 -g-~~v~~H~~~~~~~~~~~l~~~~~~a~~~g~~v~i~H~~~~~~~------~~g~~~~~~~~l~~a~~~g-~v~~~~~~ 297 (496)
T 1rk6_A 227 -G-GVYATHMRDEGEHIVQALEETFRIGRELDVPVVISHHKVMGKL------NFGRSKETLALIEAAMASQ-DVSLDAYP 297 (496)
T ss_dssp -T-CEEEEECSCSSTTHHHHHHHHHHHHHHHTSCEEECSCCCCSGG------GTTTHHHHHHHHHHHHHHS-CEEEEECS
T ss_pred -C-CEEEEEeCCCcccHHHHHHHHHHHHHHcCCeEEEEEEeccCCc------chhhHHHHHHHHHHHHHcC-CeEEEEec
Confidence 1 2333444333445567788888888999999877 87653210 0000001233444432222 22
Q ss_pred eeEEecCCChhHHHHHHhcC-CeEEECccccccc-----------cCcccHH---HHHHcCC-----------------c
Q 015784 278 LSAHTVWVNHTEIGLLSRAG-VKVSHCPASAMRM-----------LGFAPIK---EMLHADI-----------------C 325 (400)
Q Consensus 278 ~~~h~~~~~~~~i~~~~~~~-~~~~~~p~~~~~~-----------~~~~~~~---~~~~~Gv-----------------~ 325 (400)
...|+.+++ ++++++.+ +.+++|| ++..+ .+..|+. ++++.|+ +
T Consensus 298 ~~~~~~~~~---~~~l~~~~~~~v~~~p-~~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~~ 373 (496)
T 1rk6_A 298 YVAGSTMLK---QDRVLLAGRTLITWCK-PYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFGP 373 (496)
T ss_dssp CSCEEEECC---CCTTTTSSCEEEEEES-SCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHSTT
T ss_pred cCCCCCccc---HHHhcCccceEEeccC-CCcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCCC
Confidence 223554444 44555554 7777777 44332 3445554 3556676 6
Q ss_pred EEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 326 VSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 326 v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+++|||+.+++....+..+......+.+.. .+...++++++|+++|.|||++||+++ +|+|++|+.|
T Consensus 374 ~~iGTD~~~~~~~~~~~~~~~~~~~l~~~v-------~~~~~l~~~~~l~~~T~~~A~~lgl~~-~G~i~~G~~A 440 (496)
T 1rk6_A 374 TMIGSDGLPHDERPHPRLWGTFPRVLGHYS-------RDLGLFPLETAVWKMTGLTAAKFGLAE-RGQVQPGYYA 440 (496)
T ss_dssp EEECCCCCTTCSSCCTHHHHHHHHHHCCCC-------CCTCSSCHHHHHHTTTHHHHHHHTCTT-CSSCCTTSBC
T ss_pred EEEecCCCCCCCCCCchhhccHHHHHHHHH-------hhcCCCCHHHHHHHHHHHHHHHhCCCC-CCCcCCCCcc
Confidence 899999976532222222222222222110 113449999999999999999999975 7999999987
|
| >1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-26 Score=213.31 Aligned_cols=311 Identities=17% Similarity=0.154 Sum_probs=179.3
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+..++|+|++|++++ ...+++|+|+||+|++|++..+.+ . ..+.++||++|++|+|||||+|+|+....
T Consensus 7 ~~~~~i~n~~v~~~~----~~~~~~v~i~~g~I~~ig~~~~~~--~-~~~~~viD~~g~~v~PG~iD~H~H~~~~~---- 75 (390)
T 1onw_A 7 AGFTLLQGAHLYAPE----DRGICDVLVANGKIIAVASNIPSD--I-VPNCTVVDLSGQILCPGFIDQHVHLIGGG---- 75 (390)
T ss_dssp GCCEEEESCEEESSS----EEEECEEEEETTEEEEEETTCCTT--S-SSSCEEEECTTCEEEECEEEEEECTTCCB----
T ss_pred cceEEEECcEEECCC----CCccceEEEECCEEEEEecCcccC--C-CCCCeEEeCCCCEECcCeeEeeECccccC----
Confidence 346799999999754 245679999999999999753210 1 12458999999999999999999985321
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC-----CH---HHHHHHHHHcCCeEEEecc
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ-----HV---SEMAKAVELLGLRACLVQS 169 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~-----~~---~~~~~~~~~~g~~~~~~~~ 169 (400)
....+. ..+.+. .+..++++|+|++.++... .. ....+.....|++.+....
T Consensus 76 -~~~~~~------------~~~~~~-------~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g 135 (390)
T 1onw_A 76 -GEAGPT------------TRTPEV-------ALSRLTEAGVTSVVGLLGTDSISRHPESLLAKTRALNEEGISAWMLTG 135 (390)
T ss_dssp -CTTSGG------------GBCCCC-------CHHHHHHTTEEEEEECCCSCCSSCCHHHHHHHHHHHHHHTSEEEEEEE
T ss_pred -cccccc------------ccCHHH-------HHHHHHHCCeeEEecCCCcccccCcHHHHHHHHHHHHhcCCceEEecc
Confidence 000110 001111 2356889999999997532 12 2334555666777654332
Q ss_pred cccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCC------eeeEec
Q 015784 170 TMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKT------GIHMHV 243 (400)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~------~v~~H~ 243 (400)
.+.. +....... .......++.+. + .++.+.++.....+.+.+.++++.+++.+. .+++|.
T Consensus 136 ~~~~----~~~~~~~~----~~~~~~~~~~~~----g-~~~~~~~~~~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~ 202 (390)
T 1onw_A 136 AYHV----PSRTITGS----VEKDVAIIDRVI----G-VKCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHM 202 (390)
T ss_dssp CSCS----SCCCSSSC----HHHHHHHCTTEE----E-EEEEESSTTSCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEE
T ss_pred ccCC----Cchhhhhh----hcchhhhHHHhh----c-ceeeecCCCCCCCCHHHHHHHHHHHhhhhhhhccCceEEEEe
Confidence 2211 11100000 111111111111 1 244455555556788888888877765543 367887
Q ss_pred CCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCe-eeEEecCCCh----hHHHHHHhcCCeEEECccccccccCcccHHH
Q 015784 244 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNL-LSAHTVWVNH----TEIGLLSRAGVKVSHCPASAMRMLGFAPIKE 318 (400)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~h~~~~~~----~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 318 (400)
.++....+.+.+. ...+.....+ ...|+ +..+ +.++.+++.+.....++.... ..+..+++.
T Consensus 203 ~~~~~~~~~~~~~-----------~~~g~~~v~~l~~~h~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~ 269 (390)
T 1onw_A 203 GDSKKALQPIYDL-----------LENCDVPISKLLPTHV-NRNVPLFEQALEFARKGGTIDITSSIDEP-VAPAEGIAR 269 (390)
T ss_dssp CSCTTTTHHHHHH-----------HHTCCCCGGGEEEECG-GGSHHHHHHHHHHHHTTCCEEEETTCCSS-SCHHHHHHH
T ss_pred CCCHHHHHHHHHH-----------HhccCCceEEeecccc-ccCHHHHHHHHHHHhcCCccccccccCCC-CcCHHHHHH
Confidence 6555444333221 1112111111 11343 2232 345555555555555543221 234567899
Q ss_pred HHHcCCc---EEEcCCCCCCCCC---------------CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHH
Q 015784 319 MLHADIC---VSLGTDGAPSNNR---------------MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 380 (400)
Q Consensus 319 ~~~~Gv~---v~~gtD~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~ 380 (400)
++++|++ ++++||+.+..+. .+++..++.... ..+++++++++++|.|
T Consensus 270 ~~~~g~~~d~i~l~TD~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~t~n 335 (390)
T 1onw_A 270 AVQAGIPLARVTLSSDGNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVK--------------DYDFSISDALRPLTSS 335 (390)
T ss_dssp HHHTTCCGGGEEEECCBTCC-------------CCCCSHHHHHHHHHHHH--------------HHCCCHHHHHGGGTHH
T ss_pred HHHcCCCccceEEEccCCCCCcccCCccccccccCCCHHHHHHHHHHHHH--------------HcCCCHHHHHHHHhHH
Confidence 9999984 8999998632110 122333332211 1248999999999999
Q ss_pred HHHHcCCCCCccccccCcCC
Q 015784 381 GAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 381 ~A~~lg~~~~~G~i~~G~~A 400 (400)
||++||++ ++|+|++|++|
T Consensus 336 pA~~~gl~-~~G~i~~G~~A 354 (390)
T 1onw_A 336 VAGFLNLT-GKGEILPGNDA 354 (390)
T ss_dssp HHHHTTCT-TCSSCCTTSBC
T ss_pred HHHHhCCC-CCcccCCCCcC
Confidence 99999996 46999999987
|
| >3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.6e-26 Score=210.01 Aligned_cols=319 Identities=15% Similarity=0.149 Sum_probs=184.8
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCC
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADD 100 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~ 100 (400)
++|+|++|++++ ..+++++|+|+||+|++|++..+. + .+.++||++|++|+|||||+|+|....
T Consensus 5 ~~i~n~~i~~~~---~~~~~~~i~I~dG~I~~i~~~~~~----~-~~~~viD~~G~~v~PGfID~HvHg~~G-------- 68 (381)
T 3iv8_A 5 YALTNCKIYTGN---DVLVKHAVIINGDKIEAVCPIESL----P-SEMNVVDLNGANLSPGFIDLQLNGCGG-------- 68 (381)
T ss_dssp EEEEEEEEECSS---CEESSEEEEEETTEEEEEEEGGGS----C-TTCEEEEEEEEEEEECEEEEEECEETT--------
T ss_pred EEEEccEEEcCC---CeEeccEEEEECCEEEEEeCCCCC----C-CCCeEEECCCCEEccCeEeeeecccCC--------
Confidence 589999999854 356778999999999999985432 1 356899999999999999999997541
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCc-CCHHH-------HHHHHHHcCCeEEEeccccc
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGG-QHVSE-------MAKAVELLGLRACLVQSTMD 172 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~-~~~~~-------~~~~~~~~g~~~~~~~~~~~ 172 (400)
.++ ....+.++.. ...+.++++|||++.+... ...+. ..+.....+.. ..+++-
T Consensus 69 ~~~-----------~d~~~~e~l~----~~~~a~~~~GvTt~l~t~~T~~~e~l~~al~~~~~~~~~~~~~---ilGiHl 130 (381)
T 3iv8_A 69 VMF-----------NDEITAETID----TMHKANLKSGCTSFLPTLITSSDENMRQAIAAAREYQAKYPNQ---SLGLHL 130 (381)
T ss_dssp EET-----------TTSCSHHHHH----HHHHHHHHTTEEEEEEEEESCCHHHHHHHHHHHHHHHHHCSSS---BCCEEE
T ss_pred CCC-----------CCCCCHHHHH----HHHHHHHhCCccccccccCCCCHHHHHHHHHHHHHHHhcCCCc---eeEeec
Confidence 111 0111222222 2346688999999998531 22221 12222221111 234555
Q ss_pred CCCCCCcccccCCchHHHH-HHHHHHHHhccCCCCCeEEEe-eccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhh
Q 015784 173 CGEGLPASWAVRTTDDCIQ-SQKELYAKHHHAADGRIRIWF-GIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYEN 250 (400)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~ 250 (400)
+||++++.+.+.++...+. ...+.++++..... .++.+. .|. ... .++++.+.+.|+.+.+.......+
T Consensus 131 EGPfis~~~~Ga~~~~~i~~p~~~~~~~~~~~~~-~i~~vTlAPE---~~~----~~~i~~l~~~gi~vs~GHs~A~~e- 201 (381)
T 3iv8_A 131 EGPYLNVMKKGIHSVDFIRPSDDTMIDTICANSD-VIAKVTLAPE---NNK----PEHIEKLVKAGIVVSIGHTNATYS- 201 (381)
T ss_dssp ECSSCCGGGCTTSCTTTCCCCCHHHHHHHHHTTT-SEEEEEECCT---TSC----HHHHHHHHHTTCEEEECSBCCCHH-
T ss_pred cCcccCHhhcCCCCHHHcCCCCHHHHHHHHhccC-CeEEEEECCC---CCc----HHHHHHHHHCCCEEEecCCCCCHH-
Confidence 7888888777766554433 22233444444333 466532 332 112 345566778888887644333322
Q ss_pred hHHhhhcCC------------------CCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhc-C--CeEEECcccccc
Q 015784 251 QVVMDTRKV------------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRA-G--VKVSHCPASAMR 309 (400)
Q Consensus 251 ~~~~~~~~~------------------~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~-~--~~~~~~p~~~~~ 309 (400)
...+.... ..+.+.......-. .--+|.++.|+.+..++.+.+. + +..+.-.....-
T Consensus 202 -~~~~a~~~Ga~~~THlfNaM~~~~hR~PG~vga~l~~~~~-~~elI~DG~Hv~p~~~~~~~~~~g~~~~lvTDam~a~G 279 (381)
T 3iv8_A 202 -EARKSFESGITFATHLFNAMTPMVGREPGVVGAIYDTPEV-YAGIIADGFHVDYANIRIAHKIKGEKLVLVTDATAPAG 279 (381)
T ss_dssp -HHHHHHHTTCCEESSTTSSBCCCBTTBCHHHHHHHHCTTC-EEEEECSSSSSCHHHHHHHHHHHGGGEEEECCBCTTTT
T ss_pred -HHHHHHHcCCCEeeeCCCCCCCccCCCCchHHHHhcCCCc-EEEEEcCCccCCHHHHHHHHHhcCCEEEEEeCcccccC
Confidence 22211111 11122111111000 0126778999999888876553 2 222221111111
Q ss_pred c-cCcccHH---HHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 310 M-LGFAPIK---EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 310 ~-~~~~~~~---~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
+ .+.+.+. -..+.| .+...|+...++..+++++++.+... .+++++||++++|.|||++|
T Consensus 280 ~~dg~y~lgg~~v~v~~g--~~~l~~g~lAGs~l~l~~~v~~~v~~--------------~g~~~~~al~~aT~~pA~~l 343 (381)
T 3iv8_A 280 AEMDYFIFVGKKVYYRDG--KCVDENGTLGGSALTMIEAVQNTVEH--------------VGIALDEALRMATLYPAKAI 343 (381)
T ss_dssp SCCSEEESSSCEEEEETT--EEECTTCCBCSBCCCHHHHHHHHHHT--------------TCCCHHHHHHHHTHHHHHHH
T ss_pred CCCCeeecCCeEEEEECC--EEEcCCCCccChhhhHHHHHHHHHHh--------------hCCCHHHHHHHHHHHHHHHh
Confidence 1 1222110 011233 22334555555778899999987632 35999999999999999999
Q ss_pred CCCCCccccccCcCC
Q 015784 386 LWDNDIGSLEAGKKV 400 (400)
Q Consensus 386 g~~~~~G~i~~G~~A 400 (400)
|+++++|+|++||+|
T Consensus 344 g~~~~~G~i~~G~~A 358 (381)
T 3iv8_A 344 GVDEKLGRIKKGMIA 358 (381)
T ss_dssp TCTTTSSSCCTTSBC
T ss_pred CCCCCCceECCCCcC
Confidence 999889999999987
|
| >4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-27 Score=235.01 Aligned_cols=329 Identities=15% Similarity=0.173 Sum_probs=170.5
Q ss_pred CCCCCCCCCCC-CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhh-------hhhhccCCCcEEeCCCc
Q 015784 5 SSGGGSSSGSL-GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADI-------LQQFSQMADQIIDLQSQ 76 (400)
Q Consensus 5 ~~~~~~~~~~~-~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~-------~~~~~~~~~~viD~~g~ 76 (400)
+.|++.+++.. ....|++|+|++|+|+.+ +.+++|+|+||||++||+.... +....+++++|||++|+
T Consensus 322 r~gmgq~~~~~~~~~~DLVItNA~IVD~tG----i~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~Gk 397 (840)
T 4gy7_A 322 RDGMGQSCGHPPAISLDTVITNAVIIDYTG----IIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGL 397 (840)
T ss_dssp SBTTTBCSSSCGGGSCSEEEEEEEEEETTE----EEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTC
T ss_pred cccCCcCCCCCCcccCCEEEeCeEEECCCC----eEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCC
Confidence 34556655543 345699999999998542 3678999999999999964211 01112346899999999
Q ss_pred EeeecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-------
Q 015784 77 ILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH------- 149 (400)
Q Consensus 77 ~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~------- 149 (400)
+|+|||||+|+|+... .. ...++.+|+|++...+...
T Consensus 398 iVtPGfID~HvHl~~P-----------------------------~~-------~~eALasGVTTvv~gGtgp~~~~~~~ 441 (840)
T 4gy7_A 398 IVTAGAIDCHVHYICP-----------------------------QL-------VYEAISSGITTLVGGGTGPAAGTRAT 441 (840)
T ss_dssp EEEECEEEEEEECCCT-----------------------------HH-------HHHHHHHTEEEEEEECSSSCHHHHHS
T ss_pred EEccCeeeeccCCCCC-----------------------------Cc-------hHHHHHhhHHHHHhCCCceecCcccc
Confidence 9999999999998541 00 1235678999998754221
Q ss_pred -----HHH---HHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCC
Q 015784 150 -----VSE---MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNAT 221 (400)
Q Consensus 150 -----~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (400)
... .........+....... + . . ... ....+..+. ....++. ...+..+
T Consensus 442 ~~~~~~~~~~~~l~a~~~~~vn~g~~~~----~---~----~-~~~---~~L~el~~a----Ga~g~K~----~~~~~~t 498 (840)
T 4gy7_A 442 TCTPSPTQMRLMLQSTDDLPLNFGFTGK----G---S----S-SKP---DELHEIIKA----GAMGLKL----HEDWGST 498 (840)
T ss_dssp SCCCSHHHHHHHHHHTTTSSSEEEEEEE----C---C----C-SSS---HHHHHHHHH----TCSEEEE----ETTTCCC
T ss_pred cccchHHHHHHHHhhhhcceeEEEEeCC----C---C----c-ccH---HHHHHhhhc----eeeEEEe----ccccCCC
Confidence 111 12222222222211100 0 0 0 011 112222211 1122332 2334567
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchh--hhH-HhhhcCCC-----------CChHHHHhHhCCCCCCeeeEEecCCC-
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYE--NQV-VMDTRKVD-----------HGTVTFLDKIEFLQNNLLSAHTVWVN- 286 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~--~~~-~~~~~~~~-----------~~~~~~l~~~~~~~~~~~~~h~~~~~- 286 (400)
++.+..+++.+++++..+.+|....... .+. +....+.. ....+.+...+. ...+.+.....
T Consensus 499 ~~~i~~aL~~A~e~g~~V~ih~e~~~~~~~vee~laA~~g~~~h~~~~e~~~~~~A~dii~~~~~---a~~l~~~t~~~~ 575 (840)
T 4gy7_A 499 PAAIDNCLTIAEHHDIQINIHTDTLNEAGFVEHSIAAFKGRTIHTYHSEGAGGGHAPDIIKVCGI---KNVLPSSTNPTR 575 (840)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHTTCCEEETTTTSTTSCSTTTGGGGGGC---TTEEEEEESTTS
T ss_pred HHHHHHHHHHHHHhCCEEEEeccCcchhHHHHHHHHhhcCCcccceeccccccccchHHHHHhhc---ccceeeEeeccc
Confidence 8899999999999999999998643221 111 11100000 000001111111 01111111100
Q ss_pred -------hhHHHHHH-hcCCeEEECcccc-c---c-c-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHH-HHHHHHHHH
Q 015784 287 -------HTEIGLLS-RAGVKVSHCPASA-M---R-M-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIV-DEMYLASLI 351 (400)
Q Consensus 287 -------~~~i~~~~-~~~~~~~~~p~~~-~---~-~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~-~~~~~~~~~ 351 (400)
.+.+.... ...... ..+... . + . ........+.+.|+..+++||+.+........ ..+..+...
T Consensus 576 ~~~~~~~~e~l~~~~~~~~l~~-~i~ed~~~~~s~~~~~~~a~~~ll~dlGvi~~isSD~~p~~~~~e~~~~~~~~a~~~ 654 (840)
T 4gy7_A 576 PLTSNTIDEHLDMLMVCHHLDR-EIPEDLAFAHSRIRKKTIAAEDVLNDIGAISIISSDSQAMGRVGEVISRTWQTADKM 654 (840)
T ss_dssp SCBTTHHHHHHHHHHHHTTCCT-TSHHHHHHHHHHSCHHHHHHHHHHHHTTSSCEEECCBTTTBCGGGHHHHHHHHHHHH
T ss_pred hhhhhhhhhhheeEEeeeccCc-cchhhhhhccCcCCccchhHHHHHHhCCCeEEEeccccccccccccchhhhcccccc
Confidence 00011100 000000 000000 0 0 0 11223455778899999999987653322222 222222111
Q ss_pred hcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 352 ~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
...............+++++++|+++|.|||++||+++++|+|++||+|
T Consensus 655 ~~~~g~~~~e~~~~~~Lsl~eAIr~aTiNPAraLGLddr~GSIEpGK~A 703 (840)
T 4gy7_A 655 KAQTGPLKCDSSDNDNFRIRRYIAKYTINPAIANGFSQYVGSVEVGKLA 703 (840)
T ss_dssp HHHHCSCTTSCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSSSSCTTSBC
T ss_pred hhhcccchhhhhhcCCCCHHHHHHHHHHHHHHHhCCCCCccccCCCCcc
Confidence 1111111112223456999999999999999999999999999999998
|
| >3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.4e-25 Score=208.95 Aligned_cols=327 Identities=14% Similarity=0.161 Sum_probs=169.0
Q ss_pred CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccc
Q 015784 16 GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAK 95 (400)
Q Consensus 16 ~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~ 95 (400)
++|++++|+|++|+|+++ .+++++++|+|+||||++|++.... +.+.++||++|++|+|||||+|+|+......
T Consensus 1 MsM~~lli~ng~i~d~~~-~~~~~~~dV~I~~G~I~~Ig~~~~~-----~~~~~vID~~G~~v~PGfID~H~H~~~~~~~ 74 (426)
T 3mkv_A 1 MSLTTFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPIK-----SSNAHVIDVKGKTIMPGLIDLHVHVVAIEFN 74 (426)
T ss_dssp --CCEEEEEEEEECCTTS-SSCEEEEEEEEETTEEEEEESSCCC-----CSSCEEEECTTCEEEECEEEEEECTTCCSSC
T ss_pred CCcCcEEEECeEEEeCCC-CcEecCcEEEEECCEEEEecCCCCC-----CCCCEEEECCCCEEEeChhhhhhCcccccCC
Confidence 457899999999998653 3567889999999999999986542 2367999999999999999999998653221
Q ss_pred cccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHH--HHcCCeEEEecccccC
Q 015784 96 GIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAV--ELLGLRACLVQSTMDC 173 (400)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~--~~~g~~~~~~~~~~~~ 173 (400)
... .......................++|+................ ................
T Consensus 75 ~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (426)
T 3mkv_A 75 LPR----------------VATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAGYPFKQAVESGLVEGPRLFVSGRALSQ 138 (426)
T ss_dssp HHH----------------HTTSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCCHHHHHHHHTTSSCCCEEEECCSEEEC
T ss_pred ccc----------------ccccchhHHHHHHHhhhhhhhcccccccccccccchhhhhHhhccceeeceeccccccccc
Confidence 100 0111222222222223345566777777766533322211111 1111111111110000
Q ss_pred -CCCCC---------cc-------ccc--CCchHHHHHHHHHHHHhccCCCCCeEEEee--------ccccccCCHHHHH
Q 015784 174 -GEGLP---------AS-------WAV--RTTDDCIQSQKELYAKHHHAADGRIRIWFG--------IRQIMNATDRLLL 226 (400)
Q Consensus 174 -~~~~~---------~~-------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~e~l~ 226 (400)
+.... .. ... .............................. .......+.....
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (426)
T 3mkv_A 139 TGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIR 218 (426)
T ss_dssp TTSTTCCCCCSSBCCCSSSCSSBCCTTCSEEECCSHHHHHHHHHHHHHHTCSSEEEECBCCSSCSSCCTTSBCSCHHHHH
T ss_pred cccccchhhhhhccccccccchhhhhccccccccCHHHHHHHHHHHhhcccccccccccccccccccccccchhhHHHHH
Confidence 00000 00 000 000011111222222111111111111111 1112334455556
Q ss_pred HHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccc
Q 015784 227 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPAS 306 (400)
Q Consensus 227 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~ 306 (400)
.....+.+.......+......... ....+. ....+...............+......+..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (426)
T 3mkv_A 219 AIVAEAQGRGTYVLAHAYTPAAIAR---------------AVRCGV----RTIEHGNLIDDETARLVAEHGAYVVPTLVT 279 (426)
T ss_dssp HHHHHHHTTTCCEEEEECSHHHHHH---------------HHHTTC----CEEEECTTCCHHHHHHHHHHTCEEECCHHH
T ss_pred HHHHHHHhcccceeehhhhhhhHHH---------------HHhhcc----ccccccccccchhhhhhhhcCccccccccc
Confidence 6666666666666665533221111 111111 112233333344444444445554444332
Q ss_pred cc---------------------cc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCC
Q 015784 307 AM---------------------RM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTD 364 (400)
Q Consensus 307 ~~---------------------~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (400)
.. .. .+..+...+.+.|+.+.+|+|...... .....++...
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~d~~~~~~-~~~~~~~~~~---------------- 342 (426)
T 3mkv_A 280 YDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQ-RLQSDEFRIL---------------- 342 (426)
T ss_dssp HHHHHHHTTTTTCCHHHHTTHHHHHTTHHHHHHHHHHHTCCBCCCCCCCGGGG-GGTTHHHHHH----------------
T ss_pred hhhhhhhhhhccccccccccccccccccchhhHHhhhcCceeeeccCCccccc-chHHHHHHHH----------------
Confidence 10 11 223466778899999999999875421 1122222221
Q ss_pred CCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 365 ~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
..++|++|||+++|.|||++||+++++|+|++||+|
T Consensus 343 ~~gls~~eal~~~T~~pA~~lgl~~~~Gsi~~G~~A 378 (426)
T 3mkv_A 343 AEVLSPAEVIASATIVSAEVLGMQDKLGRIVPGAHA 378 (426)
T ss_dssp HTTSCHHHHHHHTTHHHHHHTTCBTTBSSCCTTSBC
T ss_pred HhCCCHHHHHHHHHHHHHHHhCCCCCcceeCCCCcc
Confidence 125999999999999999999999999999999998
|
| >3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-23 Score=200.23 Aligned_cols=320 Identities=15% Similarity=0.134 Sum_probs=180.4
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGI 97 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~ 97 (400)
+++++|+|++|+++++. ...+++|+|+||+|++|++... ..+.++||++|++|+|||||+|+|+.....+.
T Consensus 6 ~~~~~i~~~~v~~~~~~--~~~~~~v~i~~g~I~~i~~~~~------~~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~- 76 (480)
T 3gip_A 6 KLDFKITGGWIIDGTGA--PRRRADLGVRDGRIAAIGELGA------HPARHAWDASGKIVAPGFIDVHGHDDLMFVEK- 76 (480)
T ss_dssp CEEEEEESSEECCSSSC--CCEECEEEEETTEEEEEECCTT------SCEEEEEECTTSEEEECEEESSCCCTTHHHHS-
T ss_pred cCCEEEECcEEECCCCC--eeeeeEEEEECCEEEEecCCCC------CCCCeEEECCCCEEccCEEeccccccccccCC-
Confidence 46899999999986543 4578899999999999998642 23568999999999999999999996522111
Q ss_pred cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeecc---------Cc-----------------CCHH
Q 015784 98 ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA---------GG-----------------QHVS 151 (400)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~---------~~-----------------~~~~ 151 (400)
.. ....+.+|+|++.+. .. ....
T Consensus 77 ------------------~~-------------~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~~ 125 (480)
T 3gip_A 77 ------------------PD-------------LRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVP 125 (480)
T ss_dssp ------------------TT-------------CHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSHH
T ss_pred ------------------hh-------------HHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCHH
Confidence 00 022588999999972 11 1133
Q ss_pred HHHHHHHHcC--CeEEE--ecccc---cCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHH
Q 015784 152 EMAKAVELLG--LRACL--VQSTM---DCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRL 224 (400)
Q Consensus 152 ~~~~~~~~~g--~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 224 (400)
...+.....+ +.... +.... ..+. .........+....+++++....+...++....+......+.+.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g~-----~~~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p~~~~~~~e 200 (480)
T 3gip_A 126 AYFAALDAQRPMINVAALVGHANLRLAAMRD-----PQAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQPGAVAQAAE 200 (480)
T ss_dssp HHHHHHHHSCCSSEEEEEEEHHHHHHHHCSS-----TTSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTTGGGCCHHH
T ss_pred HHHHHHHhCCCCceEEEccccHHHHHHhcCC-----cCCCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCCcccCCHHH
Confidence 3344444332 22211 11100 0110 01112233444444544433333222333332222223457778
Q ss_pred HHHHHHHHHHcCCeeeEecCCCchh-hhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC-------h---hHHHHH
Q 015784 225 LLETRDMAREFKTGIHMHVAEIPYE-NQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-------H---TEIGLL 293 (400)
Q Consensus 225 l~~~~~~a~~~~~~v~~H~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-------~---~~i~~~ 293 (400)
+.++++.++++|.++.+|+.+.... .+.+.+ .++.....+ .+..+.|..... . +.++.+
T Consensus 201 l~~~~~~a~~~g~~v~~H~~~~~~~~~~a~~e-------~i~la~~~g---~~v~i~H~s~~~~~~~~~~~~~l~~i~~a 270 (480)
T 3gip_A 201 LEGLARVAAERRRLHTSHIRNEADGVEAAVEE-------VLAIGRGTG---CATVVSHHKCMMPQNWGRSRATLANIDRA 270 (480)
T ss_dssp HHHHHHHHHHTTCEEEEECSCSSTTHHHHHHH-------HHHHHHHHC---CEEEETTCCCCSGGGTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEEecCccccHHHHHHH-------HHHHHHHhC---CCEEEEEEeccCccchhhHHHHHHHHHHH
Confidence 8888899999999999999654321 111111 223333333 334444554211 3 335556
Q ss_pred HhcCCe--EEECcccccc------------------------ccC-----------cccHH-------------------
Q 015784 294 SRAGVK--VSHCPASAMR------------------------MLG-----------FAPIK------------------- 317 (400)
Q Consensus 294 ~~~~~~--~~~~p~~~~~------------------------~~~-----------~~~~~------------------- 317 (400)
++.|+. +.++|..... +.+ ..+..
T Consensus 271 ~~~G~~Vt~e~~p~~~~~t~~~l~~~~~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~~ 350 (480)
T 3gip_A 271 REQGVEVALDIYPYPGSSTILIPERAETIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDE 350 (480)
T ss_dssp HHTTCCEEEEECSCSCEEEECCGGGTTTSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHHH
T ss_pred HHcCCceEEEeeccccCcchhhhcCHHHHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHHH
Confidence 666654 4556653211 000 11111
Q ss_pred -HHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccccc
Q 015784 318 -EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEA 396 (400)
Q Consensus 318 -~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~ 396 (400)
..+..+-...+|||+.+......+...-.....+.... .....++++++++++|.|||++||++++ |+|++
T Consensus 351 ~~~~~~~~~~~~gsD~~~~~~~~~~~~~~~~~~~~~~~v-------~~~~~~~~~~~~~~~t~~~a~~~g~~~~-G~l~~ 422 (480)
T 3gip_A 351 VKRIFQHPCCMVGSDGLPNDARPHPRLWGSFTRVLGRYV-------REARLMTLEQAVARMTALPARVFGFAER-GVLQP 422 (480)
T ss_dssp HHHHHHSTTEEECCCCCTTCSSCCTHHHHHHHHHHHCCC-------CCTCSSCHHHHHHHHTHHHHHHHTCTTC-SSCST
T ss_pred HHHHHcCCCeEEecCCcccCCCCChhhhhhHHHHHHHHh-------hhcCCCCHHHHHHHHHHHHHHHcCCCCC-CccCC
Confidence 11223456788999876532222222222222222110 1234599999999999999999999875 99999
Q ss_pred CcCC
Q 015784 397 GKKV 400 (400)
Q Consensus 397 G~~A 400 (400)
|+.|
T Consensus 423 G~~A 426 (480)
T 3gip_A 423 GAWA 426 (480)
T ss_dssp TSBC
T ss_pred CCCC
Confidence 9987
|
| >1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10 | Back alignment and structure |
|---|
Probab=99.93 E-value=3e-26 Score=211.37 Aligned_cols=288 Identities=13% Similarity=0.129 Sum_probs=165.3
Q ss_pred eceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcccccccccCCCChhHhhhhccccccCCC
Q 015784 39 RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNM 118 (400)
Q Consensus 39 ~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (400)
++++|+|+||+|++|++ . + || +|++|+|||||+|+|+..... +. . .
T Consensus 28 ~~~~V~I~~g~I~~vg~-----------~-~-iD-~g~~v~PGlID~H~H~~~~~~--------~~-----------~-~ 73 (376)
T 1o12_A 28 FTGDVEIEEGKIVKVEK-----------R-E-CI-PRGVLMPGFVDPHIHGVVGAD--------TM-----------N-C 73 (376)
T ss_dssp EEEEEEEETTEEEEEEE-----------C-C-SC-CSSEEEECEEEEEECEETTEE--------TT-----------T-T
T ss_pred cCceEEEECCEEEEeCC-----------C-c-cC-CCCEEccCeEEEeecCCCCCC--------CC-----------h-h
Confidence 67899999999999985 1 5 89 999999999999999965221 00 0 0
Q ss_pred ChhhHHHHHHHHHHHHHhcCcceeeccCcCC--------HHHHHHHHHH-cC--CeEEEecccccCCCCCCcccccCCch
Q 015784 119 TEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VSEMAKAVEL-LG--LRACLVQSTMDCGEGLPASWAVRTTD 187 (400)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~--------~~~~~~~~~~-~g--~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (400)
+ + ...+.+++++|||++.+++... .+...+..++ .| ++..... ++.+..........
T Consensus 74 ~----l---~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~g~~~~-----g~~~~~~~~g~~~~ 141 (376)
T 1o12_A 74 D----F---SEMEEFLYSQGVTTFLATTVSTSLEKMKEILRKARDYILENPSTSLLGVHLE-----GPYISKEKKGAHSE 141 (376)
T ss_dssp C----H---HHHHHHHHTTTEEEEEEECCSCCHHHHHHHHHHHHHHHHHCTTCSEEEEEEE-----CSSSCGGGCTTSCT
T ss_pred h----H---HHHHHHHHhCCcEEEEeccCCCCHHHHHHHHHHHHHHhhccCCCceEEEEEE-----cCcCCcccCCCCCH
Confidence 0 1 1134678999999999976332 1223344444 35 3332221 22222211111111
Q ss_pred HHHHHH-HHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeE-ecCCCchhhhHHhhhcC------C
Q 015784 188 DCIQSQ-KELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM-HVAEIPYENQVVMDTRK------V 259 (400)
Q Consensus 188 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~-H~~~~~~~~~~~~~~~~------~ 259 (400)
..+... .+.++++ .+....+...++.... +++++|++.|+++++ |+.++..+.....+.-. .
T Consensus 142 ~~~~~~~~~~~~~~---~~~~~~~~~~pe~~~~-------~~i~~A~~~g~~v~igH~~~~~~~i~~a~~~G~~~itH~~ 211 (376)
T 1o12_A 142 KHIRPPSERELSEI---DSPAKMLTFAPEIESS-------ELLLRLVKRDIVLSAGHSIATFEEFMKFYKEGVKRITHFP 211 (376)
T ss_dssp TTCCCCCHHHHTTC---CTTEEEEEECTTSTTG-------GGGGGGGGGTCEEEECSBCCCHHHHHHHHTTTCCEESSTT
T ss_pred HHhcCCCHHHHHHh---hCCeEEEEEccCCccH-------HHHHHHHHCCCEEEeecCccCHHHHHHHHHCCCCeEEecc
Confidence 111111 2333333 2222223333332211 467889999999999 98777555544332200 0
Q ss_pred -CCChHHHHhHhCCC-----CCCe---eeEEecCCChhHHHHHHhc-CCeEEECccccccc-cCcccHHHHHHcCCcEEE
Q 015784 260 -DHGTVTFLDKIEFL-----QNNL---LSAHTVWVNHTEIGLLSRA-GVKVSHCPASAMRM-LGFAPIKEMLHADICVSL 328 (400)
Q Consensus 260 -~~~~~~~l~~~~~~-----~~~~---~~~h~~~~~~~~i~~~~~~-~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~ 328 (400)
.....+++ ..|++ ..+. ++.|+.++++++++.+.+. +.. ..+|.++..+ .+..+.. +...|+++.+
T Consensus 212 ~~~~~~~~~-~~g~~~~~l~~~~~~~~~~~~~~~~~p~~~~~~~~~~g~~-~~~~~sd~~~~~g~~~g~-~~~~g~~~~~ 288 (376)
T 1o12_A 212 NGLKPLHHR-EIGITGAGLLLDDVKLELICDGVHLSREMVKLVYKVKKAN-GIVLVTDSISAAGLKDGT-TTLGDLVVKV 288 (376)
T ss_dssp TTBCCCCSS-CCHHHHHHHHCTTCEEEEECSSSSSCHHHHHHHHHHHTGG-GEEEECCBCTTTTSCSCE-EESSSSEEEE
T ss_pred cCcCChhhc-ccchhhhhhcCCcceEEEeCCCcCcCHHHHHHHHhhCCCC-CEEEecCchhhcCCCCee-EEECCeEEEE
Confidence 11111111 11111 1232 4678999999999998877 553 2344444443 3333322 2233444444
Q ss_pred --c----CCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 329 --G----TDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 329 --g----tD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
| +|...++...+++.+++.+.... +++++++++++|.|||++||++++ |+|++|++|
T Consensus 289 ~~g~~~~~~g~~~g~~~~l~~~l~~~~~~~--------------~~~~~~~l~~~T~~~A~~lgl~~~-G~i~~G~~A 351 (376)
T 1o12_A 289 KDGVPRLEDGTLAGSTLFFSQAVKNFRKFT--------------GCSITELAKVSSYNSCVELGLDDR-GRIAEGTRA 351 (376)
T ss_dssp ETTEEECTTSCBCCBCCCHHHHHHHHHHHH--------------CCCHHHHHHHHTHHHHHHTTCTTS-SCCSTTSBC
T ss_pred eCCeEEeCCCcccccccCHHHHHHHHHHHc--------------CCCHHHHHHHHHHHHHHHhCCCCC-ccCCCCCcC
Confidence 3 44433335678999998765322 489999999999999999999876 999999987
|
| >4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ... | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-25 Score=214.67 Aligned_cols=85 Identities=24% Similarity=0.238 Sum_probs=65.6
Q ss_pred cCCCCCCCCCCCCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhh-----hhccCCCcEEeCCCcEe
Q 015784 4 NSSGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-----QFSQMADQIIDLQSQIL 78 (400)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~-----~~~~~~~~viD~~g~~v 78 (400)
.+.|+++++.+.....|++|+|++|+|.+ . +.+++|+|+||||++||+..+... ...+.+++|||++|++|
T Consensus 50 ~~~~~~~~~~~~~~~~DlvI~Na~Ivd~~---G-i~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV 125 (566)
T 4ep8_C 50 IRDGMGQGQMLAADCVDLVLTNALIVDHW---G-IVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIV 125 (566)
T ss_dssp SSBTTTBCCCCGGGSCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEE
T ss_pred cccccCCCCCCCCCCCCEEEECcEEECCC---C-eEEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEE
Confidence 34566777766667889999999999864 2 357899999999999997432100 01134689999999999
Q ss_pred eecccccCcCCccc
Q 015784 79 LPGFVNTHVHTSQQ 92 (400)
Q Consensus 79 ~PG~iD~H~H~~~~ 92 (400)
+|||||+|+|+...
T Consensus 126 ~PG~ID~HvH~~~~ 139 (566)
T 4ep8_C 126 TAGGIDTHIHWICP 139 (566)
T ss_dssp EECEEEEEEECSCT
T ss_pred EcCEEEecccccCC
Confidence 99999999999764
|
| >2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-18 Score=157.04 Aligned_cols=244 Identities=16% Similarity=0.117 Sum_probs=168.8
Q ss_pred CCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeecc-------C--cCC--------HHHHHHHHHHc--
Q 015784 100 DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEA-------G--GQH--------VSEMAKAVELL-- 160 (400)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~-------~--~~~--------~~~~~~~~~~~-- 160 (400)
..++.+|+..+.++.....++++.+..+...+.++++.|||++... . +.. .+...+..++.
T Consensus 90 ~~~L~~~l~~~~~~~~~~~t~ed~~~~a~~~l~e~~~~GV~y~E~r~dp~~~~~~~gl~~~~~~~a~~~~~~~a~~~~~~ 169 (371)
T 2pgf_A 90 GKSLGEFVEKAIKVADIFHDYEVIEDLAKHAVFNKYKEGVVLMEFRYSPTFVAFKYNLDIELIHQAIVKGIKEVVELLDH 169 (371)
T ss_dssp CSCHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHHTEEEEEEEECHHHHHTTTTCCHHHHHHHHHHHHHHHHHHTTT
T ss_pred CCCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEECcccccccCCCCHHHHHHHHHHHHHHHHHHccC
Confidence 4567788888877777778889999999999999999999997321 0 011 12233344456
Q ss_pred CCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeee
Q 015784 161 GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 240 (400)
Q Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~ 240 (400)
|++..+....... ++.. . ..+..+...+ .....+. +++.+.... ++.+..+++.|++.|+++.
T Consensus 170 gi~~~li~~~~r~---~~~~-------~-~~~~~~~a~~---~~~~vvg--~dl~g~e~~-~~~~~~~~~~A~~~gl~~~ 232 (371)
T 2pgf_A 170 KIHVALMCIGDTG---HEAA-------N-IKASADFCLK---HKADFVG--FDHGGHEVD-LKEYKEIFDYVRESGVPLS 232 (371)
T ss_dssp SSEEEEEEEEEES---STTC-------C-HHHHHHHHHH---TTTTEEE--EEEEESCCC-GGGGHHHHHHHHHTTCCBE
T ss_pred CCEEEEEEEecCC---CCHH-------H-HHHHHHHHHh---CCCCEEE--EecCCCccc-HHHHHHHHHHHHHcCCcEE
Confidence 8877555554432 1111 1 1112222222 2222233 344444444 7789999999999999999
Q ss_pred EecCCCchhhhHHhhhcCCCCCh-HHHHhHhCCCCCCeeeEEecCCChhH--HHHHHhcCCeEEECcccccccc-----C
Q 015784 241 MHVAEIPYENQVVMDTRKVDHGT-VTFLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGVKVSHCPASAMRML-----G 312 (400)
Q Consensus 241 ~H~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~h~~~~~~~~--i~~~~~~~~~~~~~p~~~~~~~-----~ 312 (400)
+|+.|.... .+ .+.....+.++.. .+.|+.++++++ ++++++.|+.+++||.||+.+. .
T Consensus 233 ~HagE~~~~------------~~~~~i~~al~~lg~~-ri~Hgv~l~~~~~l~~~l~~~~i~v~~cP~SN~~l~~~~~~~ 299 (371)
T 2pgf_A 233 VHAGEDVTL------------PNLNTLYSAIQVLKVE-RIGHGIRVAESQELIDMVKEKNILLEVCPISNVLLKNAKSMD 299 (371)
T ss_dssp EEESCCTTS------------SSSHHHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHTTCEEEECHHHHHHTTSSSCGG
T ss_pred EeeCCCCCC------------CchHHHHHHHhccCCC-EEecchhccccHHHHHHHHHcCCeEEECcchhHHhCCCCccc
Confidence 999987410 01 2222334444444 689999997665 9999999999999999998863 2
Q ss_pred cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 313 FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 313 ~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
..|+++|+++|++|++|||++.+++ .+++.+++.+.... +++++++ +.+|.|++++.++++
T Consensus 300 ~~pi~~ll~~Gv~V~lgTD~~~~~~-~~l~~e~~~a~~~~--------------~l~~~~l-~~lt~ns~~asf~~~ 360 (371)
T 2pgf_A 300 THPIRQLYDAGVKVSVNSDDPGMFL-TNINDDYEELYTHL--------------NFTLEDF-MKMNEWALEKSFMDS 360 (371)
T ss_dssp GCTHHHHHHTTCEEEECCBCHHHHT-CCHHHHHHHHHHHH--------------CCCHHHH-HHHHHHHHHHCCSCH
T ss_pred cChHHHHHHCCCeEEEeCCCCcccC-CCHHHHHHHHHHHh--------------CCCHHHH-HHHHHHHHHHHcCCH
Confidence 3699999999999999999876533 58999999877543 3899995 888999999998864
|
| >3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=1.4e-16 Score=141.78 Aligned_cols=243 Identities=16% Similarity=0.098 Sum_probs=162.3
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--------cCCH--------HHHHHHHHHcCCeE
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--------GQHV--------SEMAKAVELLGLRA 164 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--------~~~~--------~~~~~~~~~~g~~~ 164 (400)
.++.+++..+.+...-..+.++.+..+...++++.+.||+.+-... +... +...+..++.|++.
T Consensus 54 ~~l~~fl~~~~~~~~vl~t~ed~~~~a~~~~~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~ 133 (326)
T 3pao_A 54 NNLQEFLDLYYAGADVLRTEQDFYDLTWAYLQKCKAQNVVHVEPFFDPQTHTDRGIPFEVVLAGIRAALRDGEKLLGIRH 133 (326)
T ss_dssp SSHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEECCEECHHHHHTTTCCHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCeEEEEEEChHHhccCCCCHHHHHHHHHHHHHHHHhhCceEE
Confidence 4666777777776666677888888888888999999999874321 1111 12233444567765
Q ss_pred EEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecC
Q 015784 165 CLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (400)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~ 244 (400)
.+..+.+... ..+...+..+...++.. ..+.+-+... ....+++.+..+++.|++.|+++.+|+.
T Consensus 134 ~lI~~~~R~~-----------~~~~a~~~~~~a~~~~~---~vvG~dL~g~-E~~~~~~~~~~~~~~A~~~gl~~~~Hag 198 (326)
T 3pao_A 134 GLILSFLRHL-----------SEEQAQKTLDQALPFRD---AFIAVGLDSS-EVGHPPSKFQRVFDRARSEGFLTVAHAG 198 (326)
T ss_dssp CCEEEEETTS-----------CHHHHHHHHHHHGGGGG---GCSEEEEESC-CTTCCGGGGHHHHHHHHHTTCEECEEES
T ss_pred EEEEEeCCCC-----------CHHHHHHHHHHHhhccc---cceeeCCCCC-CCCCCHHHHHHHHHHHHHcCCceeeecC
Confidence 4444444321 12222223333333332 2333322211 1334566788999999999999999999
Q ss_pred CCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcCCeEEECcccccccc-----CcccHH
Q 015784 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRML-----GFAPIK 317 (400)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~~-----~~~~~~ 317 (400)
|.... -.+....+.++. ..+.|+.++. +++++++++.++.+++||.||+.+. +..|++
T Consensus 199 E~~~~--------------~~i~~al~~lg~-~rigHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi~ 263 (326)
T 3pao_A 199 EEGPP--------------EYIWEALDLLKV-ERIDHGVRAFEDERLMRRLIDEQIPLTVCPLSNTKLCVFDDMSQHTIL 263 (326)
T ss_dssp SSSCH--------------HHHHHHHHTTCC-SSEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTSSSSGGGCCHH
T ss_pred CCCCH--------------HHHHHHHhcCCC-ceeeeeeeecccHHHHHHHHHcCCeEEECchhHHHhCCCCCcccChHH
Confidence 87531 111222323333 2479999987 6699999999999999999999873 457999
Q ss_pred HHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 318 EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 318 ~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
+|+++|++|++|||++..+++ +++.++..+.... +++++| ++.++.|+++..-+.+
T Consensus 264 ~ll~~Gv~V~l~TDdp~~~~~-~l~~e~~~a~~~~--------------~l~~~~-l~~l~~nsi~~sf~~~ 319 (326)
T 3pao_A 264 DMLERGVKVTVNSDDPAYFGG-YVTENFHALQQSL--------------GMTEEQ-ARRLAQNSLDARLVKE 319 (326)
T ss_dssp HHHHHTCCEEECCBSHHHHTC-CHHHHHHHHHHHH--------------CCCHHH-HHHHHHHHHHTCC---
T ss_pred HHHHCCCeEEEeCCCcccCCC-CHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHHHhcc
Confidence 999999999999998865444 8999999877543 389999 5888899998776653
|
| >3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=1.2e-15 Score=136.76 Aligned_cols=243 Identities=15% Similarity=0.082 Sum_probs=163.7
Q ss_pred CChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC--------cCCHHH--------HHHHHHHcCCeE
Q 015784 101 VDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG--------GQHVSE--------MAKAVELLGLRA 164 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~--------~~~~~~--------~~~~~~~~g~~~ 164 (400)
.++.+++..+.+...-..+.++.+.-+...++++.+.||+.+-... +...+. ..+..+..|+..
T Consensus 57 ~~l~~fl~~f~~~~~vl~~~e~~~~~~~~~l~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~ 136 (343)
T 3rys_A 57 TDLQSFLDLYYANMAVLQTEQDFTDMTRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVST 136 (343)
T ss_dssp SSHHHHHHHHHHHGGGCCSHHHHHHHHHHHHHHHHHTTEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEE
T ss_pred CCHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCCCEEEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhhcCceeE
Confidence 4556666665555444567788888888888999999999885421 111111 222344567766
Q ss_pred EEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecC
Q 015784 165 CLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244 (400)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~ 244 (400)
.+..+.+... ..+...+..+...++ .+..+.+-+... ....+++.+..+++.|++.|+++.+|+.
T Consensus 137 ~lI~~~~R~~-----------~~~~a~~~l~~a~~~---~~~vvG~dL~g~-E~~~~~~~~~~~~~~A~~~gl~~~~Hag 201 (343)
T 3rys_A 137 LLIAAFLRDM-----------SEDSALEVLDQLLAM---HAPIAGIGLDSA-EVGNPPSKFERLYQRAAEAGLRRIAHAG 201 (343)
T ss_dssp EEEEEEETTS-----------CHHHHHHHHHHHHHT---TCCCCEEEEESC-CTTCCGGGGHHHHHHHHHTTCEEEEEES
T ss_pred EEEEEeCCCC-----------CHHHHHHHHHHHHhC---CCCEEEEecCCc-ccCCCHHHHHHHHHHHHHCCCeEEEeeC
Confidence 5555554331 122222233333333 233444332221 2344567788999999999999999999
Q ss_pred CCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcCCeEEECcccccccc-----CcccHH
Q 015784 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRML-----GFAPIK 317 (400)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~~-----~~~~~~ 317 (400)
|.... ..+....+.++. ..+.|+.++. +++++++++.++.+++||.||+.+. ...|++
T Consensus 202 E~~~~--------------~~i~~al~~lg~-~rIgHgv~l~~d~~l~~~l~~~~i~le~cP~SN~~l~~~~~~~~hPi~ 266 (343)
T 3rys_A 202 EEGPA--------------SYITEALDVLHV-ERIDHGIRCMEDTDVVQRLVAEQVPLTVCPLSNVRLRAVDKLADHPLP 266 (343)
T ss_dssp SSSCH--------------HHHHHHHHTSCC-SEEEECGGGGGCHHHHHHHHHHTCCEEECHHHHHHTTSSSCGGGCSHH
T ss_pred CCCCH--------------HHHHHHHhcCCc-ceeeeeeeecCChHHHHHHHhcCCCeeEchhHHHHhCCCCCcccchHH
Confidence 87532 122223333333 3479999986 5789999999999999999999873 246999
Q ss_pred HHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 318 EMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 318 ~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
+|+++|++|++|||++..+++ ++..++..+.... ++++++ ++.++.|+.+...+++
T Consensus 267 ~ll~~Gv~V~l~TDdp~~~~~-~l~~E~~~a~~~~--------------~l~~~~-l~~l~~nsi~~sf~~~ 322 (343)
T 3rys_A 267 EMLAIGLNVCVNSDDPAYFGG-YVDDNFEQLVKVL--------------EFSVPE-QATLAANSIRSSFASD 322 (343)
T ss_dssp HHHHTTCCEEECCBSTTTTTC-CHHHHHHHHHHHH--------------CCCHHH-HHHHHHHHHHHSSSCH
T ss_pred HHHHCCCeEEEeCCCccccCC-CHHHHHHHHHHHc--------------CCCHHH-HHHHHHHHHHHHCCCH
Confidence 999999999999999877555 8999999877543 389999 5777899999887764
|
| >3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian} | Back alignment and structure |
|---|
Probab=99.67 E-value=1.3e-16 Score=111.94 Aligned_cols=71 Identities=24% Similarity=0.385 Sum_probs=56.8
Q ss_pred CcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 17 ~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
+..+++|+|++|+++++.. ..+++|+|+||+|++|++..+.+. ...+.++||++|++|+|||||+|+|+..
T Consensus 2 ~~~~~li~n~~i~~~~~~~--~~~~~i~I~~g~I~~ig~~~~~~~--~~~~~~viD~~g~~v~PG~ID~H~H~~~ 72 (81)
T 3ggm_A 2 NVPDMILYNGKITTLDPSQ--PEVSAIAITDGLITAVGGDELLNS--ATEKTKKIDLKRKRAIPGLNDSHIHVIR 72 (81)
T ss_dssp CCCSEEEESSEEECSCTTC--SEESEEEEETTEEEEEESGGGGGG--CCTTCEEEECTTCEEEECCCCTTEEEEC
T ss_pred CcCCEEEECCEEEeCCCCC--ccccEEEEECCEEEEEeCchHhcc--cCCCCEEEECCCCEEeeCeEeeeeCCCC
Confidence 3567899999999875432 246799999999999998654322 1235689999999999999999999976
|
| >3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ... | Back alignment and structure |
|---|
Probab=99.60 E-value=2.2e-13 Score=122.85 Aligned_cols=243 Identities=13% Similarity=0.075 Sum_probs=155.8
Q ss_pred CChhHhhhhccccccCCC-ChhhHHHHHHHHHHHHHhcCcceeecc-C-------------------cCCHH--------
Q 015784 101 VDLMTWLHDRIWPYESNM-TEEDSYISTLLCGIELIHSGVTCFAEA-G-------------------GQHVS-------- 151 (400)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~GvTt~~~~-~-------------------~~~~~-------- 151 (400)
.++.+++..+.+...-.. +.++.+.-+...++++.+.||..+-.. . +...+
T Consensus 53 ~~L~~fl~~f~~~~~vl~~~~edl~~~a~e~~ed~a~dgV~Y~Eir~~P~~~~~~~~~~~~~~~~~~gl~~~~vv~~v~~ 132 (367)
T 3iar_A 53 LTLPDFLAKFDYYMPAIAGCREAIKRIAYEFVEMKAKEGVVYVEVRYSPHLLANSKVEPIPWNQAEGDLTPDEVVALVGQ 132 (367)
T ss_dssp CCHHHHHGGGGGTHHHHTTCHHHHHHHHHHHHHHHHTTTEEEEEEEECGGGGCSSSCSSCGGGCCCCSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCEEEEEEecHHHhhhccccccccccccCCCCHHHHHHHHHH
Confidence 344555554433222233 567777777778899999999987642 1 11222
Q ss_pred HHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCH---HHHHHH
Q 015784 152 EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATD---RLLLET 228 (400)
Q Consensus 152 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---e~l~~~ 228 (400)
...+...+.|+...+..+++... + .. ..+..+...++.. ++.+.+-+.... ....+ +.+..+
T Consensus 133 ~~~~a~~~~gi~~~lI~~~~R~~---~--------~~-a~e~~~la~~~~~--~~vvG~dL~g~E-~~~~~~~~~~f~~~ 197 (367)
T 3iar_A 133 GLQEGERDFGVKARSILCCMRHQ---P--------NW-SPKVVELCKKYQQ--QTVVAIDLAGDE-TIPGSSLLPGHVQA 197 (367)
T ss_dssp HHHHHHHHHCCEEEEEEEEETTC---G--------GG-HHHHHHHHHHTTT--TTEEEEEEESCT-TSTTGGGCHHHHHH
T ss_pred HHHHHHHhcCCeEEEEEEeCCCC---C--------HH-HHHHHHHHHhhCC--CCEEEEcCCCcc-cCCCcchHHHHHHH
Confidence 12233445577765555554321 1 11 1223333333332 233333222211 12222 578899
Q ss_pred HHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcCCeEEECccc
Q 015784 229 RDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPAS 306 (400)
Q Consensus 229 ~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~ 306 (400)
++.|++.|+++.+|+.|..... ......+.++.. .+.|+.++. +++++++++.++.+++||.|
T Consensus 198 f~~A~~~gl~~~~HagE~~~~~--------------~i~~al~~lg~~-RIgHgv~l~~d~~l~~~l~~~~i~le~cP~S 262 (367)
T 3iar_A 198 YQEAVKSGIHRTVHAGEVGSAE--------------VVKEAVDILKTE-RLGHGYHTLEDQALYNRLRQENMHFEICPWS 262 (367)
T ss_dssp HHHHHHHTCEEEEEESSSSCHH--------------HHHHHHHTSCCS-EEEECGGGGGCHHHHHHHHHTTCEEEECHHH
T ss_pred HHHHHHcCCeeEEecCCcCChH--------------HHHHHHHccCCc-eeeeeeeecCCHHHHHHHHhCCcEEEECHHH
Confidence 9999999999999999876421 112233333333 579999984 57899999999999999999
Q ss_pred ccccc-----CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHH
Q 015784 307 AMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATING 381 (400)
Q Consensus 307 ~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~ 381 (400)
|+.+. ...|+++|+++|++|++|||++..+ +.++..++..+.... ++++++ +..+|.|+
T Consensus 263 N~~l~~~~~~~~hPi~~ll~~Gv~v~l~TDdp~~~-~~~l~~e~~~a~~~~--------------glt~~e-l~~l~~ns 326 (367)
T 3iar_A 263 SYLTGAWKPDTEHAVIRLKNDQANYSLNTDDPLIF-KSTLDTDYQMTKRDM--------------GFTEEE-FKRLNINA 326 (367)
T ss_dssp HHHTSSSCTTSCCHHHHHHHTTCCEEECCBSHHHH-TCCHHHHHHHHHHHH--------------CCCHHH-HHHHHHHH
T ss_pred HHHhCCCCCcccChHHHHHHCCCEEEECCCCcccc-CCCHHHHHHHHHHHc--------------CCCHHH-HHHHHHHH
Confidence 98873 2469999999999999999987542 246888888876543 489998 77778999
Q ss_pred HHHcCCCC
Q 015784 382 AKSVLWDN 389 (400)
Q Consensus 382 A~~lg~~~ 389 (400)
++...+++
T Consensus 327 i~~sf~~~ 334 (367)
T 3iar_A 327 AKSSFLPE 334 (367)
T ss_dssp HHTSSSCH
T ss_pred HHHhCCCH
Confidence 99887763
|
| >3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=99.51 E-value=1.8e-12 Score=117.08 Aligned_cols=152 Identities=11% Similarity=0.075 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHh-HhC-CCCCCeeeEEecCCChhHHHHHHh-c
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLD-KIE-FLQNNLLSAHTVWVNHTEIGLLSR-A 296 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~-~~~~~~~~~h~~~~~~~~i~~~~~-~ 296 (400)
.+.+.|.++++.+++.|.++.+|+.+...... .....+..+. -.. ..+.+..+.|.. +.+.++.+++ .
T Consensus 133 ~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~~-------~E~~ai~r~~~la~~~~g~~lhi~HvS--t~~~v~~I~~A~ 203 (359)
T 3pnu_A 133 FDIEYLKPTLEAMSDLNIPLLVHGETNDFVMD-------RESNFAKIYEKLAKHFPRLKIVMEHIT--TKTLCELLKDYE 203 (359)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEECCCCSSCGGG-------TTGGGHHHHHHHHHHCTTSCEEECSCC--SHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecCCchHhHH-------HHHHHHHHHHHHHHHcCCCcEEEEecC--cHHHHHHHHhcC
Confidence 47889999999999999999999976542110 0001222211 111 224444444443 2455666655 4
Q ss_pred CCeEEECcccccc-------------cc---------CcccHHHHHHcCCcE-EEcCCCCCCCC----------CCC-HH
Q 015784 297 GVKVSHCPASAMR-------------ML---------GFAPIKEMLHADICV-SLGTDGAPSNN----------RMS-IV 342 (400)
Q Consensus 297 ~~~~~~~p~~~~~-------------~~---------~~~~~~~~~~~Gv~v-~~gtD~~~~~~----------~~~-~~ 342 (400)
.+.+.+||..-+- .. .+..+.+.+..|... .++|||.|... +.. ..
T Consensus 204 ~VtaEv~phhL~lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~~~g~~Gi~~~~ 283 (359)
T 3pnu_A 204 NLYATITLHHLIITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKECCGCAAGVFSAP 283 (359)
T ss_dssp TEEEEECSGGGTCCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC------CCCSCBCCGG
T ss_pred CceEEEechhhEEcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCCCCCCCChhhHH
Confidence 6778899874220 00 111344566779777 79999986521 111 00
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 343 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
..+........ ..++++++++.++.|||+++|+..+.|
T Consensus 284 ~~L~l~~~~~~------------~~~~l~~lv~~~s~nPAki~gL~~~~G 321 (359)
T 3pnu_A 284 VILPVLAELFK------------QNSSEENLQKFLSDNTCKIYDLKFKED 321 (359)
T ss_dssp GHHHHHHHHHH------------HHSCHHHHHHHHTHHHHHHHTCCCSSC
T ss_pred HHHHHHHHHHh------------hcCCHHHHHHHHHHhHHHHhCCCCCCC
Confidence 11111111111 126899999999999999999976556
|
| >2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A* | Back alignment and structure |
|---|
Probab=99.46 E-value=2.2e-12 Score=117.04 Aligned_cols=156 Identities=9% Similarity=0.115 Sum_probs=87.7
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHH--hhhcCCCCChHH-HHhHhCCCCCCeeeEEecCCChhHHHHHHh
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVV--MDTRKVDHGTVT-FLDKIEFLQNNLLSAHTVWVNHTEIGLLSR 295 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~--~~~~~~~~~~~~-~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~ 295 (400)
..+.+.|..+++.+++.+.++.+|+.+........ ... ...+ .+. .+.. ..+.+..+.|.. +.+.++.+++
T Consensus 116 ~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~~~~~~~E~~-~~~~-~i~~~la~--~~~~~~hi~Hvs--t~~~~~~i~~ 189 (347)
T 2z26_A 116 VTSVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREAR-FIES-VMEPLRQR--LTALKVVFEHIT--TKDAADYVRD 189 (347)
T ss_dssp CSCGGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHH-HHHH-THHHHHHH--STTCCEEECSCC--SHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHhCCEEEEEecCCccccCHHHHHHH-HHHH-HHHHHHHh--hcCCcEEEEECC--cHHHHHHHHH
Confidence 34677899999999999999999997654111100 000 0000 110 1222 334455444443 3455666555
Q ss_pred c--CCeEEECcccccc-------------cc---------CcccHHHHHHcCCcE-EEcCCCCCCCC----------CC-
Q 015784 296 A--GVKVSHCPASAMR-------------ML---------GFAPIKEMLHADICV-SLGTDGAPSNN----------RM- 339 (400)
Q Consensus 296 ~--~~~~~~~p~~~~~-------------~~---------~~~~~~~~~~~Gv~v-~~gtD~~~~~~----------~~- 339 (400)
. ++.+.+||...+- .. ....+.+.+..|.+. .++|||.|... +.
T Consensus 190 ak~~Vt~e~~ph~L~l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~~~g~~Gi~ 269 (347)
T 2z26_A 190 GNERLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCF 269 (347)
T ss_dssp SCTTEEEEECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSSSSBCCCCC
T ss_pred hCCCceEeecchHheecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcCCCCCCCcC
Confidence 4 4667778764210 00 112345566778776 89999965411 11
Q ss_pred --CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccc
Q 015784 340 --SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (400)
Q Consensus 340 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i 394 (400)
...-++... +.. .++++++++++.|.|||++||+..++|+|
T Consensus 270 ~~e~~l~l~~~--~~~------------~~~sl~~~v~~~s~nPAki~gl~~~kG~i 312 (347)
T 2z26_A 270 NAPTALGSYAT--VFE------------EMNALQHFEAFCSVNGPQFYGLPVNDTFI 312 (347)
T ss_dssp CTTTHHHHHHH--HHH------------HTTCGGGHHHHHHTHHHHHHTCCCCCCEE
T ss_pred cHHHHHHHHHH--Hhh------------cCCCHHHHHHHHhHhHHHHhCCCCCCCeE
Confidence 111111111 111 13799999999999999999997556875
|
| >2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ... | Back alignment and structure |
|---|
Probab=99.33 E-value=2.7e-10 Score=102.35 Aligned_cols=223 Identities=13% Similarity=0.075 Sum_probs=126.5
Q ss_pred HHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHH-HHHHhcc--
Q 015784 130 CGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE-LYAKHHH-- 202 (400)
Q Consensus 130 ~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-- 202 (400)
.+.++.+.|+|++.+.+.. ......+.++..+++.+...+++. ..+..... ... ....+ +.+....
T Consensus 52 ~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~~i~~~~G~hp---~~p~~~~~-~~~---~~l~~~l~~~~~~gi 124 (330)
T 2ob3_A 52 GLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADVHIVAATGLWF---DPPLSMRL-RSV---EELTQFFLREIQYGI 124 (330)
T ss_dssp HHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTCEEECEEECCS---CCCHHHHT-CCH---HHHHHHHHHHHHTCS
T ss_pred HHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCCcEEEEecCCc---CCCchhcc-CCH---HHHHHHHHHHHHhhc
Confidence 4567889999999987642 466667777777766544433332 11211111 111 22212 2222211
Q ss_pred --C--CCCCeEEEeeccccccCCHH---HHHHHHHHHHHcCCeeeEecCC-CchhhhHHhhhcCCCCChHHHHhHhCCCC
Q 015784 203 --A--ADGRIRIWFGIRQIMNATDR---LLLETRDMAREFKTGIHMHVAE-IPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (400)
Q Consensus 203 --~--~~~~~~~~~~~~~~~~~~~e---~l~~~~~~a~~~~~~v~~H~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 274 (400)
. ....+. ++.. +..++. .+...+++|++.|+||.+|+.. .....+ .++++...+...
T Consensus 125 ~~~~~k~~aiE--iGld--~~~~~~q~~~f~~q~~lA~~~glPv~iH~~~~~r~a~e-----------~l~iL~~~g~~~ 189 (330)
T 2ob3_A 125 EDTGIRAGIIK--VATT--GKATPFQELVLKAAARASLATGVPVTTHTAASQRDGEQ-----------QAAIFESEGLSP 189 (330)
T ss_dssp TTSCCCCSEEE--EECS--SSCCHHHHHHHHHHHHHHHHHCCCEEEECCGGGTHHHH-----------HHHHHHHTTCCG
T ss_pred cccccceeEEE--EeCC--CCCCHHHHHHHHHHHHHHHHhCCeEEEECCCCCCCHHH-----------HHHHHHHcCcCc
Confidence 1 112223 2333 233443 3778889999999999999841 111111 445566655432
Q ss_pred CCeeeEEec-CCChhHHHHHHhcCCeEEEC--cccccc--------------c--cCcccHHHHHHcC--CcEEEcCCCC
Q 015784 275 NNLLSAHTV-WVNHTEIGLLSRAGVKVSHC--PASAMR--------------M--LGFAPIKEMLHAD--ICVSLGTDGA 333 (400)
Q Consensus 275 ~~~~~~h~~-~~~~~~i~~~~~~~~~~~~~--p~~~~~--------------~--~~~~~~~~~~~~G--v~v~~gtD~~ 333 (400)
.+.++.||. ..+.+..+++.+.|..+.+. ....+. . .....++++++.| -++.+.||.+
T Consensus 190 ~~~~i~H~f~~~~~e~a~~~~~~G~~i~~~~~G~~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p 269 (330)
T 2ob3_A 190 SRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWT 269 (330)
T ss_dssp GGEEECSGGGCCCHHHHHHHHHTTCEEEECCTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred ccEEEeCCCCCCCHHHHHHHHhCCCEEEeCCCccccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCC
Confidence 344688998 56788899999999998776 221110 0 1112367788888 6899999987
Q ss_pred C-CCCC------------C-CHHHHHHH-HHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 334 P-SNNR------------M-SIVDEMYL-ASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 334 ~-~~~~------------~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
. ..+. . .+...+.. ...+. +.|++++++.++.|.||+++|+
T Consensus 270 ~~l~~~~~~~g~~~~~n~pn~~~~~~~~~ia~l~------------~~G~~~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 270 FGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFLR------------EKGVPQETLAGITVTNPARFLS 325 (330)
T ss_dssp SEECSSSTTHHHHHHHHCTTGGGHHHHTHHHHHH------------HTTCCHHHHHHHHTHHHHHHHS
T ss_pred CCcccccccCCCcccccCCCCcchHHHHHHHHHH------------HcCCCHHHHHHHHHHHHHHHhc
Confidence 3 2110 0 01000111 01110 1359999999999999999997
|
| >2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=5.8e-10 Score=99.97 Aligned_cols=232 Identities=12% Similarity=0.036 Sum_probs=130.0
Q ss_pred HHHHHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHH--h
Q 015784 127 TLLCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK--H 200 (400)
Q Consensus 127 ~~~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 200 (400)
....+.++.+.|+|++.+.+.. ......+.+++.+++.+...+++.... ...+.. ...+....+.+.. .
T Consensus 49 ~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~hp~~~--~~~~~~---~~~~~~l~~~~~~~~~ 123 (314)
T 2vc7_A 49 AVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVAGTGIYIYID--LPFYFL---NRSIDEIADLFIHDIK 123 (314)
T ss_dssp HHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECEEBCCSSC--CCGGGT---TCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEEEeecCCCCC--Cchhhh---ccCHHHHHHHHHHHHH
Confidence 3334577889999999987633 366677778888877665554443210 011110 0112223233321 1
Q ss_pred ccC-----CCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCC-CchhhhHHhhhcCCCCChHHHHhHhCCCC
Q 015784 201 HHA-----ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE-IPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (400)
Q Consensus 201 ~~~-----~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 274 (400)
... ..+.+++....+.......+.++..+++|++.|++|.+|+.+ .....+ .++.+...+...
T Consensus 124 ~gige~G~~~g~i~~~ld~~~~~~~q~~~~~~~~~lA~~~~~pv~iH~~~~~~~~~~-----------~~~~l~~~~~~~ 192 (314)
T 2vc7_A 124 EGIQGTLNKAGFVKIAADEPGITKDVEKVIRAAAIANKETKVPIITHSNAHNNTGLE-----------QQRILTEEGVDP 192 (314)
T ss_dssp TCSSSSSCCCCSEEEECCTTCSCHHHHHHHHHHHHHHHHHCCCEEEECCTTTTHHHH-----------HHHHHHHTTCCG
T ss_pred hhcccCCCCCCeEEEeecCCCCCHHHHHHHHHHHHHHHHHCCEEEEeCCCcccChHH-----------HHHHHHHcCCCc
Confidence 111 112333333332222222345777889999999999999963 121111 556667666555
Q ss_pred CCeeeEEecC-CChhHHHHHHhcCCeEEECccccccc----cCcccHHHHHHc--CCcEEEcCCCCCCC------CCC--
Q 015784 275 NNLLSAHTVW-VNHTEIGLLSRAGVKVSHCPASAMRM----LGFAPIKEMLHA--DICVSLGTDGAPSN------NRM-- 339 (400)
Q Consensus 275 ~~~~~~h~~~-~~~~~i~~~~~~~~~~~~~p~~~~~~----~~~~~~~~~~~~--Gv~v~~gtD~~~~~------~~~-- 339 (400)
.+.++.|+.. .+.++++++.+.|..+.++-...... .....++++.+. .-++.++||.+..+ +.+
T Consensus 193 ~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p~~~~ 272 (314)
T 2vc7_A 193 GKILIGHLGDTDNIDYIKKIADKGSFIGLDRYGLDLFLPVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKPEYKP 272 (314)
T ss_dssp GGEEETTGGGCCCHHHHHHHHHTTCEEEECCTTCTTTSCHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCTTSHH
T ss_pred ccEEEECCCCCCCHHHHHHHHHcCCEEEEeCCCcccCCCHHHHHHHHHHHHHcCCCCeEEEcCCccccccccccchhhhh
Confidence 5667889986 46788899999999988773111111 112235556665 35789999985221 000
Q ss_pred ------CHHHHHH-HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 340 ------SIVDEMY-LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 340 ------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
+.-..+. ....+. ..+++.+++.++.|.||+++|+
T Consensus 273 ~g~~~~~~~~~~~~~~~~l~------------~~g~~~e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 273 KLAPRWSITLIFEDTIPFLK------------RNGVNEEVIATIFKENPKKFFS 314 (314)
T ss_dssp HHCTTCSTTHHHHTHHHHHH------------HTTCCHHHHHHHHTHHHHHHTC
T ss_pred cCCCCcCHHHHHHHHHHHHH------------HcCCCHHHHHHHHHHCHHHHhC
Confidence 0000011 111111 1258999999999999999885
|
| >1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3 | Back alignment and structure |
|---|
Probab=99.23 E-value=9e-10 Score=97.54 Aligned_cols=227 Identities=12% Similarity=0.058 Sum_probs=124.8
Q ss_pred HHHHHHHhcCcceeeccCcC----CHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHH-HHhccC
Q 015784 129 LCGIELIHSGVTCFAEAGGQ----HVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY-AKHHHA 203 (400)
Q Consensus 129 ~~~~~~l~~GvTt~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 203 (400)
..++++.+.|+|++.+++.. ..+...+.++..+.+.+...+++... ..|...... . ..+..+.+ +.....
T Consensus 37 ~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~~~~-~hP~~~~~~-~---~~~l~~~~~~~l~~g 111 (291)
T 1bf6_A 37 QEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDA-FFPEHVATR-S---VQELAQEMVDEIEQG 111 (291)
T ss_dssp HHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCGG-GCCTHHHHS-C---HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeeccccCc-cCcHhhhcC-C---HHHHHHHHHHHHHhc
Confidence 34466788999999987642 35666677777776654433321110 011110011 1 11222222 212110
Q ss_pred -C-C-CCeEEE--eeccccccCCH---HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCC
Q 015784 204 -A-D-GRIRIW--FGIRQIMNATD---RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQN 275 (400)
Q Consensus 204 -~-~-~~~~~~--~~~~~~~~~~~---e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 275 (400)
. . ..+... +++... ..++ +.++..++.|++.|++|.+|+....... ..++.+...+....
T Consensus 112 i~~~~~~~~~iGe~gld~~-~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~~~~-----------~~~~~l~~~~~~~~ 179 (291)
T 1bf6_A 112 IDGTELKAGIIAEIGTSEG-KITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGL-----------EQLALLQAHGVDLS 179 (291)
T ss_dssp STTSSCCEEEEEEEECBTT-BCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCSHH-----------HHHHHHHHTTCCGG
T ss_pred cCCcCcceeeEEEEecCCC-CCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCCChH-----------HHHHHHHHcCCCch
Confidence 0 0 112221 223211 1222 4578899999999999999985321110 14456666565444
Q ss_pred CeeeEEecC-CChhHHHHHHhcCCeEEECccc--c-ccc-cCcccHHHHHHcC--CcEEEcCCCCCCC-------CCCCH
Q 015784 276 NLLSAHTVW-VNHTEIGLLSRAGVKVSHCPAS--A-MRM-LGFAPIKEMLHAD--ICVSLGTDGAPSN-------NRMSI 341 (400)
Q Consensus 276 ~~~~~h~~~-~~~~~i~~~~~~~~~~~~~p~~--~-~~~-~~~~~~~~~~~~G--v~v~~gtD~~~~~-------~~~~~ 341 (400)
+.++.|+.. .+.+.++++++.|..+.+.... + ... .....++++++.+ -++.++||.+... +....
T Consensus 180 ~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~~~~~~~~~ 259 (291)
T 1bf6_A 180 RVTVGHCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDY 259 (291)
T ss_dssp GEEECCCCSSCCHHHHHHHHHTTCEEEECCTTCTTTSCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTH
T ss_pred hEEEECCCCCCCHHHHHHHHHCCCEEEEccCcccCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCCCccchhcCCCCHHH
Confidence 667899965 5778888999999988775321 0 110 1223467788887 5789999987320 01111
Q ss_pred HHHHHH-HHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 342 VDEMYL-ASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 342 ~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
. +.. ...+. ..+++.+++.++.|.||+++||
T Consensus 260 ~--~~~~~~~l~------------~~g~~~~~~~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 260 L--LTTFIPQLR------------QSGFSQADVDVMLRENPSQFFQ 291 (291)
T ss_dssp H--HHTHHHHHH------------HTTCCHHHHHHHHTHHHHHHCC
T ss_pred H--HHHHHHHHH------------HcCCCHHHHHHHHHHhHHHHhC
Confidence 1 111 11111 1258999999999999999985
|
| >4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria} | Back alignment and structure |
|---|
Probab=99.20 E-value=1e-09 Score=99.53 Aligned_cols=227 Identities=14% Similarity=0.082 Sum_probs=141.7
Q ss_pred CChhhHHHHHHHHHHHHHhcCcceeecc---------CcCCH--------HHHHHHHHHcCCeEEEecccccCCCCCCcc
Q 015784 118 MTEEDSYISTLLCGIELIHSGVTCFAEA---------GGQHV--------SEMAKAVELLGLRACLVQSTMDCGEGLPAS 180 (400)
Q Consensus 118 ~~~~~~~~~~~~~~~~~l~~GvTt~~~~---------~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 180 (400)
.+.++.+.-+...++++.+.||..+-.. .+... +.+.+..+..|+...+..++....
T Consensus 89 ~t~ed~~r~a~e~~ed~a~dgV~Y~Eirf~P~~~~~~~Gl~~~~vv~av~~g~~~a~~~~gi~~rlI~~~~R~~------ 162 (380)
T 4gxw_A 89 TRPDDLRRIAYEYLEDAAAHNVRHAEFFWNPTGTVRVSGIPYADAQAAIVTGMRDAARDFGIGARLIPSIDREQ------ 162 (380)
T ss_dssp CSHHHHHHHHHHHHHHHHTTTEEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHCCEEEEEEEEETTS------
T ss_pred CCHHHHHHHHHHHHHHHHHCCCeEEEEEcCHHHhccccCCCHHHHHHHHHHHHHHHHHhcCCcEEEEEeecCCC------
Confidence 3556666666677889999999988742 11111 122344556677665554444321
Q ss_pred cccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCC
Q 015784 181 WAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260 (400)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~ 260 (400)
.... ..+..+...++.. ++.+.+-+.... ....++.+..+++.|++.|+++.+|++|.....+-
T Consensus 163 ----~~e~-a~~~~~~a~~~~~--~~VvG~dL~g~E-~~~p~~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~-------- 226 (380)
T 4gxw_A 163 ----DPDE-AVAIVDWMKANRA--DEVAGIGIDYRE-NDRPPELFWKAYRDARAAGFRTTAHAGEFGMPWRN-------- 226 (380)
T ss_dssp ----CHHH-HHHHHHHHHHTCC--TTBCEEEEESCC-TTCCGGGGHHHHHHHHHTTCEEEEEESCTTCCHHH--------
T ss_pred ----CHHH-HHHHHHHHHHhCC--CCEEEEeecCCC-CCCCHHHHHHHHHHHHHcCCCeeeeccccCCchHH--------
Confidence 1222 2223333333332 233443332221 23345568888999999999999999985421110
Q ss_pred CChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCCeEEECccccccccC--------cccHHHHHHcCCcEEEcC
Q 015784 261 HGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVSHCPASAMRMLG--------FAPIKEMLHADICVSLGT 330 (400)
Q Consensus 261 ~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~~~~~~p~~~~~~~~--------~~~~~~~~~~Gv~v~~gt 330 (400)
..+.+..++ . ..|.|+..+ +++.++++++.++.+.+||.||..+.. ..|++.|++.|++|+++|
T Consensus 227 --i~~al~~lg---a-~RIgHG~~~~~d~~L~~~l~~~~I~lEvCP~SN~~l~~v~~~~~~~~HP~~~l~~~Gv~vtinT 300 (380)
T 4gxw_A 227 --VETAVDLLH---V-DRVDHGYTIVDNPELCARYAERGIVFTVVPTNSYYLRTLPPDQWAERHPMRKMPGLGLKIHPNT 300 (380)
T ss_dssp --HHHHHHTSC---C-SEEEECGGGGGCHHHHHHHHHHTCEEEECTTCHHHHHHSCTTTHHHHCGGGGTGGGTCEEEECC
T ss_pred --HHHHHHHcC---C-cccccceeeccChHHHHHHHHhCceeEECCcchhhhcccccccccccChHHHHHHCCCeEEECC
Confidence 112222222 2 357899886 567799999999999999999976521 148999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 331 DGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 331 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
|.+.. .+.++.+++..+.. ..+++.+|.. ..+.|+.+...++
T Consensus 301 DDp~~-f~t~Ls~Ey~~~~~--------------~~gls~~dl~-~l~~nsi~~sF~~ 342 (380)
T 4gxw_A 301 DDPTL-HKVNPSEAWELMFS--------------HFGFTIADLK-QFMLNGIDGAWVD 342 (380)
T ss_dssp BSHHH-HTCCHHHHHHHHHH--------------TSCCCHHHHH-HHHHHHHHHSSSC
T ss_pred CCchh-hCCCHHHHHHHHHH--------------HhCcCHHHHH-HHHHHHHHHHcCC
Confidence 98743 12357777766542 2358998865 4568887776655
|
| >3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=1.4e-08 Score=91.40 Aligned_cols=250 Identities=12% Similarity=0.054 Sum_probs=149.1
Q ss_pred HHHHHHHHHHhcCcceeeccC----cCCHHHHHHHHHHc---CCeEEEecccccCCCCC-CcccccC-CchHHHHHHHHH
Q 015784 126 STLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELL---GLRACLVQSTMDCGEGL-PASWAVR-TTDDCIQSQKEL 196 (400)
Q Consensus 126 ~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~ 196 (400)
.+...+..+.+.|++++.+.. +.....+.+.++.. |++.+.+.+++...+.. .+.|... ..+...+...+-
T Consensus 50 ~~~~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~TG~y~~~~~~~~~~~~~~~~~e~l~~~~~~e 129 (363)
T 3ovg_A 50 ASIKEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMSTGFHKAKFYDKYSSWLAVVPTEEIVKMCVAE 129 (363)
T ss_dssp HHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEEEECCCGGGSCTTTSHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEeCCCCcCcccccCcHhhhcCCHHHHHHHHHHH
Confidence 344455667789999999864 34567777878876 99998887766543211 1122111 112222222221
Q ss_pred HHH-hcc------------CCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCCh
Q 015784 197 YAK-HHH------------AADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGT 263 (400)
Q Consensus 197 ~~~-~~~------------~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~ 263 (400)
+.. ... ...+.+++..........-.+.++..++.|++.|+||.+|+.......+ .
T Consensus 130 i~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~~t~~Q~~~f~aq~~~A~e~glPViiH~r~gr~a~d-----------~ 198 (363)
T 3ovg_A 130 IEEGMDEYNYNGPVVKRSKAKAGIIKAGTGYGAIDRLELKALEVAARTSILTGCPILVHTQLGTMALE-----------V 198 (363)
T ss_dssp HHTCCBTTTTSSSCCCBCSCCCCEEEEEEEETBEEHHHHHHHHHHHHHHHHHCCCEEEEEETTCSHHH-----------H
T ss_pred HHhcccccccccccccCCCccCCEEEEEeCCCCCCHHHHHHHHHHHHHHHHhCCEEEEeCCCCCCHHH-----------H
Confidence 211 111 1234556544443333333456888889999999999999864322111 4
Q ss_pred HHHHhHhCCCCCCeeeEEecC-CChhHHHHHH-hcCCeEEECccccccc----cCcccHHHHHHcCC--cEEEcCCCCCC
Q 015784 264 VTFLDKIEFLQNNLLSAHTVW-VNHTEIGLLS-RAGVKVSHCPASAMRM----LGFAPIKEMLHADI--CVSLGTDGAPS 335 (400)
Q Consensus 264 ~~~l~~~~~~~~~~~~~h~~~-~~~~~i~~~~-~~~~~~~~~p~~~~~~----~~~~~~~~~~~~Gv--~v~~gtD~~~~ 335 (400)
+++|...+....+.++.|+.. .+.+..+++. +.|..+.+.=...+.. .....++++.+.|. ++.+.||.+..
T Consensus 199 l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~G~yI~f~g~~~~~~~~~~~ra~~l~~lv~~~p~drILleTDap~~ 278 (363)
T 3ovg_A 199 AKHLIGFGANPDKIQISHLNKNPDKYYYEKVIKETGVTLCFDGPDRVKYYPDSLLAENIKYLVDKGLQKHITLSLDAGRI 278 (363)
T ss_dssp HHHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEEECCTTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSG
T ss_pred HHHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHHCCcEEEECCeeccccCChhHHHHHHHHHHHhcCCCeEEEeCCCCCC
Confidence 566777666555677889984 4566667777 7898877652211110 11235677888874 79999999722
Q ss_pred CCCCCHH------------HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcC
Q 015784 336 NNRMSIV------------DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399 (400)
Q Consensus 336 ~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ 399 (400)
+.++.. .-......+.+ ..+++.+++.++.|.||+++|++.. .+++.+|+.
T Consensus 279 -~~l~~~G~~~g~~~n~p~~l~~~~~~~a~-----------~rGis~eei~~it~~Np~rlf~l~~-~~~~~~~~~ 341 (363)
T 3ovg_A 279 -LYQRNYGLTKGKQTFGLAYLFDRFLPLLK-----------QVGVSKEAIFDILVNNPKRVLAFDE-KRNFDPLKV 341 (363)
T ss_dssp -GGSHHHHHHTTEECCCTHHHHHTHHHHHH-----------HHTCCHHHHHHHHTHHHHHHTSCCC-CCCCCGGGS
T ss_pred -cCCCCCCccCCCCCCCccHHHHHHHHHHH-----------HcCCCHHHHHHHHHHHHHHHHCCCC-cCccCcccC
Confidence 111111 11111111111 2359999999999999999999976 599999875
|
| >2a3l_A AMP deaminase, AMPD; atampd, AT2G38280, adenosine 5'-monophosphate deaminase, COF 5'-phosphate, structural genomics; HET: CF5; 3.34A {Arabidopsis thaliana} SCOP: c.1.9.1 | Back alignment and structure |
|---|
Probab=99.12 E-value=6.7e-11 Score=114.02 Aligned_cols=129 Identities=19% Similarity=0.181 Sum_probs=99.7
Q ss_pred HHHHHH-cCC---eeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhH--HHHHHhcCCeEEE
Q 015784 229 RDMARE-FKT---GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE--IGLLSRAGVKVSH 302 (400)
Q Consensus 229 ~~~a~~-~~~---~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~--i~~~~~~~~~~~~ 302 (400)
+..+++ .|+ ++++|+.|.... +. ..+.+ ++.+. +.|+.++.+++ ++++++.++.+.+
T Consensus 504 Ln~ar~~~Gl~~i~~t~HaGE~~~~-e~----------l~~al-----Lg~~R-IgHGv~l~edp~Li~lla~~~I~vev 566 (701)
T 2a3l_A 504 LNKLRESKGMTTITLRPHSGEAGDI-DH----------LAATF-----LTCHS-IAHGINLRKSPVLQYLYYLAQIGLAM 566 (701)
T ss_dssp HHHHHTTTTCCCCEECCCCSSSSCT-HH----------HHHHH-----HHCSS-CSCCGGGGGCHHHHHHHHHHTCCEEE
T ss_pred HHHHHHHcCCCCCCcccccCCCCCH-HH----------HHHHh-----cCCCe-EEEEeecccCHHHHHHHHHcCCcEEE
Confidence 345564 677 899999987531 11 11121 33333 68999987655 8999999999999
Q ss_pred Cccccccc-cCcc--cHHHHHHcCCcEEEcCCCCCCCCC--CCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 015784 303 CPASAMRM-LGFA--PIKEMLHADICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377 (400)
Q Consensus 303 ~p~~~~~~-~~~~--~~~~~~~~Gv~v~~gtD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~ 377 (400)
||.||+.+ .+.. |+++|+++|++|++|||.+..++. .+++.+++.+....+ ++..++.++
T Consensus 567 CP~SN~kl~~~~~~HPi~~ll~~Gv~VsLgTDdp~~~~~t~~dL~~Ey~~aa~~~~--------------ls~~dl~~l- 631 (701)
T 2a3l_A 567 SPLSNNSLFLDYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVWK--------------LSACDLCEI- 631 (701)
T ss_dssp CHHHHTTTTCCSTTCSHHHHHHTTCCEEECCBCHHHHCCSSSHHHHHHHHHHHHHT--------------CCHHHHHHH-
T ss_pred CccchhhhccCchHhHHHHHHHCCCcEEEeCCCccccCCCCcCHHHHHHHHHHHcC--------------CCHHHHHHH-
Confidence 99999987 6776 999999999999999999865333 479999999886653 889997666
Q ss_pred hHHHHHHcCCCC
Q 015784 378 TINGAKSVLWDN 389 (400)
Q Consensus 378 T~~~A~~lg~~~ 389 (400)
|.|+++++++++
T Consensus 632 a~Ns~~asfl~~ 643 (701)
T 2a3l_A 632 ARNSVYQSGFSH 643 (701)
T ss_dssp HHHHHHHSCCCH
T ss_pred HHHHHHHhCCCH
Confidence 999999999874
|
| >2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.07 E-value=5.6e-08 Score=85.02 Aligned_cols=215 Identities=12% Similarity=0.051 Sum_probs=122.7
Q ss_pred HHHHhcCcceeeccCcC--CHHHHHHHHHHcCCeEEEecccccCCCCCCccc-ccC-----CchHHHHHHHHHHHHhccC
Q 015784 132 IELIHSGVTCFAEAGGQ--HVSEMAKAVELLGLRACLVQSTMDCGEGLPASW-AVR-----TTDDCIQSQKELYAKHHHA 203 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~ 203 (400)
.++.+.|++++...+.. ......+.++..+.+.+...+++ +.+ ... .....+....+.+......
T Consensus 27 ~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~~i~~~~Gih-------P~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 99 (272)
T 2y1h_A 27 EKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVH-------PVQGLPPEDQRSVTLKDLDVALPIIENYKDR 99 (272)
T ss_dssp HHHHHTTEEEEEECCSSGGGHHHHHHHHHHTTTTEEEEECCC-------SBC-------CBCCHHHHHHHHHHHHHHGGG
T ss_pred HHHHHCCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEEEC-------CCccccccccccCCHHHHHHHHHHHHhCCCC
Confidence 45778899998887532 34455666666654433332222 111 110 1223344444444432111
Q ss_pred CCCCeEEEeeccc--cc-------cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCC
Q 015784 204 ADGRIRIWFGIRQ--IM-------NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQ 274 (400)
Q Consensus 204 ~~~~~~~~~~~~~--~~-------~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 274 (400)
- ..++ -++... .+ ....+.++..+++|++.++||.+|+.....+ .++++.+.+.
T Consensus 100 ~-~~iG-E~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~a~~~-------------~~~il~~~~~-- 162 (272)
T 2y1h_A 100 L-LAIG-EVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRP-------------TINLLQEQGA-- 162 (272)
T ss_dssp C-SEEE-EEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTTCHHH-------------HHHHHHHTTC--
T ss_pred E-EEEE-eccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcHHH-------------HHHHHHhCCC--
Confidence 0 1121 123332 11 1123468888999999999999999754322 3455566542
Q ss_pred CCeeeEEecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHcC--CcEEEcCCCCCCCC------CCCHH-HHH
Q 015784 275 NNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN------RMSIV-DEM 345 (400)
Q Consensus 275 ~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G--v~v~~gtD~~~~~~------~~~~~-~~~ 345 (400)
.+.++ |+..-+.+.++.+.+.|+.+.+.+.... . ..++.+.+.. -++.++||.+...+ ....+ ..+
T Consensus 163 ~~~v~-H~~~g~~~~~~~~~~~g~~i~~~g~~~~---~-~~~~~~~~~~~~drll~eTD~P~~~p~~g~~~~p~~l~~~~ 237 (272)
T 2y1h_A 163 EKVLL-HAFDGRPSVAMEGVRAGYFFSIPPSIIR---S-GQKQKLVKQLPLTSICLETDSPALGPEKQVRNEPWNISISA 237 (272)
T ss_dssp CSEEE-ETCCSCHHHHHHHHHTTCEEEECGGGGT---C-HHHHHHHHHSCGGGEEECCCTTSSCSSTTSCCCGGGHHHHH
T ss_pred CCEEE-EccCCCHHHHHHHHHCCCEEEECCcccC---c-HHHHHHHHhCCHHHEEEecCCCCCCCCCCCcCcHHHHHHHH
Confidence 24444 9977677888899999999988865531 1 1355565553 37899999873211 01111 112
Q ss_pred HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 346 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
...... .+++.+++.++.+.|++++|++++
T Consensus 238 ~~la~~--------------~g~~~e~~~~~~~~N~~~l~~~~~ 267 (272)
T 2y1h_A 238 EYIAQV--------------KGISVEEVIEVTTQNALKLFPKLR 267 (272)
T ss_dssp HHHHHH--------------HTSCHHHHHHHHHHHHHHHSTTHH
T ss_pred HHHHHH--------------HCcCHHHHHHHHHHHHHHHHHhHH
Confidence 211111 148999999999999999999864
|
| >1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12 | Back alignment and structure |
|---|
Probab=99.06 E-value=2.6e-08 Score=86.48 Aligned_cols=214 Identities=10% Similarity=0.074 Sum_probs=119.0
Q ss_pred HHHHhcCcceeeccCc--CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeE
Q 015784 132 IELIHSGVTCFAEAGG--QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIR 209 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (400)
.++.+.||+++...+. .......+.++..+ ..+...+ +.+.+........++...+.+... ....+.
T Consensus 26 ~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~-~~~~~~G-------~hP~~~~~~~~~~~~~l~~~~~~~---~~~~~~ 94 (259)
T 1zzm_A 26 QRAAQAGVGKIIVPATEAENFARVLALAENYQ-PLYAALG-------LHPGMLEKHSDVSLEQLQQALERR---PAKVVA 94 (259)
T ss_dssp HHHHHTTEEEEEEECCSGGGHHHHHHHHHHCT-TEEEEEC-------CCGGGGGGCCHHHHHHHHHHHHHC---CSSEEE
T ss_pred HHHHHcCCCEEEEecCCHHHHHHHHHHHHhCC-CeEEEEE-------ecccccccCCHHHHHHHHHHHhcC---CCCEEE
Confidence 4577889999887653 23444555555544 2222221 222221111223344444444321 011111
Q ss_pred E-Eeeccccc-----cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEec
Q 015784 210 I-WFGIRQIM-----NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV 283 (400)
Q Consensus 210 ~-~~~~~~~~-----~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~ 283 (400)
+ -++..... ....+.+...++.|.+.++||.+|+.....+ .++.+...+.. .+ ++.|+.
T Consensus 95 iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~~~-------------~~~il~~~~~~-~~-~i~H~~ 159 (259)
T 1zzm_A 95 VGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDLP-RT-GVVHGF 159 (259)
T ss_dssp EEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCHHH-------------HHHHHHHHCCT-TC-EEETTC
T ss_pred EEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccHHH-------------HHHHHHhcCCC-CC-EEEEcC
Confidence 1 12222211 1123468888899999999999999754321 44556665531 23 345987
Q ss_pred CCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHcC--CcEEEcCCCCCCCC--------CCCHH-HHHHHHHHHh
Q 015784 284 WVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNN--------RMSIV-DEMYLASLIN 352 (400)
Q Consensus 284 ~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~G--v~v~~gtD~~~~~~--------~~~~~-~~~~~~~~~~ 352 (400)
.-+.+.++.+.+.|+.+.+.+...+ .....++++.+.. -++.++||+|...+ ..... ..+.. +.
T Consensus 160 ~g~~~~~~~~~~~g~~i~~~g~~~~--~~~~~~~~~~~~~~~dril~eTD~P~~~p~~~~g~~~~p~~l~~~~~~---la 234 (259)
T 1zzm_A 160 SGSLQQAERFVQLGYKIGVGGTITY--PRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAV---LC 234 (259)
T ss_dssp CSCHHHHHHHHHTTCEEEECGGGGC--TTTCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHH---HH
T ss_pred CCCHHHHHHHHHCCCEEEECceeec--cccHHHHHHHHhCCHHHEEEecCCCCccCCCCCCCCCcHHHHHHHHHH---HH
Confidence 7677788888889999888754332 1223355666542 57899999973211 01111 11121 11
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
. ..+++.+++.+..|.|++++|++
T Consensus 235 ~-----------~~g~~~e~~~~~~~~Na~rl~~l 258 (259)
T 1zzm_A 235 E-----------LRREPADEIAQALLNNTYTLFNV 258 (259)
T ss_dssp H-----------HCSSCHHHHHHHHHHHHHHHHCC
T ss_pred H-----------HHCcCHHHHHHHHHHHHHHHhCc
Confidence 1 12589999999999999999987
|
| >3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.4e-07 Score=83.82 Aligned_cols=233 Identities=9% Similarity=0.014 Sum_probs=138.0
Q ss_pred HHHHHHHHHHhcCcceeeccC----cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHH-HHh
Q 015784 126 STLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY-AKH 200 (400)
Q Consensus 126 ~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 200 (400)
.+...+.++.+.|++++.+.+ +.....+.+.++..+++.+.+.+++... +.+.+..... +....+.+ ++.
T Consensus 87 ~~~~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~~~--~~P~~~~~~~---~~~L~~~~~~ei 161 (364)
T 3k2g_A 87 LAIAEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLAS--SMPETAARLS---ADDIADEIVAEA 161 (364)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGG--GCCGGGGTCC---HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccCCC--CCchhhccCC---HHHHHHHHHHHH
Confidence 444566889999999999975 3567788888888898877666555221 1122222111 23232222 222
Q ss_pred c------cCCCCCeEEEeeccccc-cCCHHHHHHHHHHHHHcCCeeeEecC-CCchhhhHHhhhcCCCCChHHHHhHhCC
Q 015784 201 H------HAADGRIRIWFGIRQIM-NATDRLLLETRDMAREFKTGIHMHVA-EIPYENQVVMDTRKVDHGTVTFLDKIEF 272 (400)
Q Consensus 201 ~------~~~~~~~~~~~~~~~~~-~~~~e~l~~~~~~a~~~~~~v~~H~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 272 (400)
. ....+.++- ++..... ..-.+.++..++.|++.|+||.+|+. ......+ .++++...+.
T Consensus 162 ~~Gi~~~~vkag~IGE-iGld~~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e-----------~l~iL~e~g~ 229 (364)
T 3k2g_A 162 LEGTDGTDARIGLIGE-IGVSSDFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHR-----------VLDLVEEEGA 229 (364)
T ss_dssp HTCBTTBSCCCSSEEE-EECCTTCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHH-----------HHHHHHHTTC
T ss_pred HhccccCCcceeEEEE-EEcCCCCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHHH-----------HHHHHHHcCC
Confidence 1 111122321 2332211 11223578888999999999999983 2122111 4566666665
Q ss_pred CCCCeeeEEecC-C-ChhHHHHHHhcCCeEEECcccc---ccc---------cCcccHHHHHHcC--CcEEEcCCCCCC-
Q 015784 273 LQNNLLSAHTVW-V-NHTEIGLLSRAGVKVSHCPASA---MRM---------LGFAPIKEMLHAD--ICVSLGTDGAPS- 335 (400)
Q Consensus 273 ~~~~~~~~h~~~-~-~~~~i~~~~~~~~~~~~~p~~~---~~~---------~~~~~~~~~~~~G--v~v~~gtD~~~~- 335 (400)
...+.++.|+.. - +.+..+++.+.|..+.+.-... +.. .....++++.++| =++.+.||.+..
T Consensus 230 ~~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~gt~~~f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p~~~ 309 (364)
T 3k2g_A 230 DLRHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIGMDFFYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVFVKM 309 (364)
T ss_dssp CGGGEEECCCGGGTTCHHHHHHHHHHTCEEEECCTTCCCEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGG
T ss_pred CCCceEEECCCCCCCCHHHHHHHHhCCcEEEecCCcccccccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCCCCC
Confidence 444566779983 5 7888899999999877663211 100 1223467788888 479999998621
Q ss_pred ------CCCCCHH-HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 336 ------NNRMSIV-DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 336 ------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
.+..... ....... . ..|++.+++.++.|.||+++|++..
T Consensus 310 ~~~~~gg~~~~~l~~~~~~~l--~------------~~Gis~eei~~~~~~Np~rlf~l~~ 356 (364)
T 3k2g_A 310 MLTRYGGNGYAFVTKHFLPRL--R------------RHGLDDAALETLMVTNPRRVFDASI 356 (364)
T ss_dssp GSGGGTSCTTSHHHHHHHHHH--H------------HTTCCHHHHHHHHTHHHHHHHCTTS
T ss_pred CCCCCCCCCcchHHHHHHHHH--H------------HcCCCHHHHHHHHHHHHHHHhCCCc
Confidence 1112222 1111111 1 1359999999999999999999875
|
| >3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=8.2e-08 Score=86.27 Aligned_cols=270 Identities=13% Similarity=0.083 Sum_probs=154.8
Q ss_pred cccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC----cCCHHHHHHH
Q 015784 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKA 156 (400)
Q Consensus 81 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~ 156 (400)
|++++|-|+...... +. .. .....+..++........++.+.+.|+.|+.|.. +..+..+.+.
T Consensus 52 G~tl~HEHl~~~~~~-------~~---~~---~~~~~~~~~~~~~~~~~~l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~i 118 (360)
T 3tn4_A 52 GKTLIHEHFLFGYPG-------FQ---GD---VTRGTFREDESLRVAVEAAEKMKRHGIQTVVDPTPNDCGRNPAFLRRV 118 (360)
T ss_dssp CSEESSCEEEECCTT-------GG---GG---TTTSCCCHHHHHHHHHHHHHHHHHTTCCEEEECCCTTTTCCHHHHHHH
T ss_pred CCceeccCeeecChh-------hh---cc---cccchhhhhhHHHHHHHHHHHHHhcCCCeEEECCCCCcCcCHHHHHHH
Confidence 899999998642110 00 00 0011223333344445566778889999999864 3567888999
Q ss_pred HHHcCCeEEEecccccCCCCCCcccccCCc-hHHHHHHHH-HHHHhcc------CCCCCeEEEeeccccccCCHHHHHHH
Q 015784 157 VELLGLRACLVQSTMDCGEGLPASWAVRTT-DDCIQSQKE-LYAKHHH------AADGRIRIWFGIRQIMNATDRLLLET 228 (400)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~e~l~~~ 228 (400)
++..|++.+.+.+++......+..+..... ....++..+ ++++... ...+.++.............+.++..
T Consensus 119 s~~tGv~IV~~TG~y~~~~~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi~~tgikaG~I~~~~~~~~~t~~E~k~frA~ 198 (360)
T 3tn4_A 119 AEETGLNIICATGYYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGIADTGIKAGVIKLASSKGRITEYEKMFFRAA 198 (360)
T ss_dssp HHHHCCEEEEEECCCCGGGSCTHHHHHHHHHTCHHHHHHHHHHHHHHTCSTTSCCCCSEEEEECBTTBCCHHHHHHHHHH
T ss_pred HHHcCCCEEEeCccccCcccCCcccchhhhcccCHHHHHHHHHHHHHhccccCCCcceEEEEEccCCCCCHHHHHHHHHH
Confidence 999999998887765443222221111000 001111211 2222221 12233443322222222233468899
Q ss_pred HHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEE-ecCCChhHHHHHHhcCCeEEECccc-
Q 015784 229 RDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAH-TVWVNHTEIGLLSRAGVKVSHCPAS- 306 (400)
Q Consensus 229 ~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h-~~~~~~~~i~~~~~~~~~~~~~p~~- 306 (400)
++.+++.|+||.+|........+ .+++|.+.|+...+.++.| +...+.+..+++.+.|..+.+.-..
T Consensus 199 a~aa~etG~Pv~iHt~~~~~~~e-----------~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~iG~ 267 (360)
T 3tn4_A 199 ARAQKETGAVIITHTQEGTMGPE-----------QAAYLLEHGADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRFGI 267 (360)
T ss_dssp HHHHHHHCCEEEEECSTTCCHHH-----------HHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTC
T ss_pred HHHHHHhCCcEEEEcCcccCCHH-----------HHHHHHHcCCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEccccc
Confidence 99999999999999976543211 4566677777666788899 5777788889999999998764211
Q ss_pred ----cccc--cCcccHHHHHHcCC--cEEEcCCCCC-----CCCCCCHHHH----------HHHHHHHhcccccccCCCC
Q 015784 307 ----AMRM--LGFAPIKEMLHADI--CVSLGTDGAP-----SNNRMSIVDE----------MYLASLINKGREVFANGTT 363 (400)
Q Consensus 307 ----~~~~--~~~~~~~~~~~~Gv--~v~~gtD~~~-----~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~ 363 (400)
.+.. .....++.+.+.|- ++.+++|.+. +......++. +.......
T Consensus 268 ~~~~~~p~d~~r~~~l~~lv~~g~~drILLstDa~~~~~~~py~~p~p~r~~~~~~~y~~i~~~~ip~L----------- 336 (360)
T 3tn4_A 268 QGMVGAPTDEERVRTLLALLRDGYEKQIMLSHDTVNVWLGRPFTLPEPFAEMMKNWHVEHLFVNIIPAL----------- 336 (360)
T ss_dssp CCSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEEESSSCCCCCHHHHHHTTTCSTTHHHHTHHHHH-----------
T ss_pred ccccCCCChHHHHHHHHHHHHhcCcceEEEecCCCcccccCCCCCcccccccCCCCCchhHHHHHHHHH-----------
Confidence 1110 12235677888873 8999999721 0000011111 11111111
Q ss_pred CCCCCCHHHHHHHHhHHHHHHc
Q 015784 364 DPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 364 ~~~~l~~~~al~~~T~~~A~~l 385 (400)
...|++.+++-++.+.||+++|
T Consensus 337 ~~~Gvs~e~I~~i~~~NP~rlf 358 (360)
T 3tn4_A 337 KNEGIRDEVLEQMFIGNPAALF 358 (360)
T ss_dssp HHTTCCHHHHHHHHTHHHHHHH
T ss_pred HHcCCCHHHHHHHHHHhHHHHh
Confidence 1246999999999999999987
|
| >3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=4.3e-08 Score=87.82 Aligned_cols=243 Identities=14% Similarity=0.061 Sum_probs=141.3
Q ss_pred ChhhHHHHHHHHHHHHHhcCcceeeccCc----CCHHHHHHHHHHcCCeEEEecccccCCCCCC--cccccCCchHHHHH
Q 015784 119 TEEDSYISTLLCGIELIHSGVTCFAEAGG----QHVSEMAKAVELLGLRACLVQSTMDCGEGLP--ASWAVRTTDDCIQS 192 (400)
Q Consensus 119 ~~~~~~~~~~~~~~~~l~~GvTt~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 192 (400)
+.++.+..+...+.++.+.|++++.+... .....+.+.+++.++..+...+++......+ +.+... ....+..
T Consensus 57 ~~~~~~~~~~~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG~hp~~~~~~~~~~~~~~-~~~~~~~ 135 (339)
T 3gtx_A 57 DHAAALASCTETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATGFYYEGGGATTYFKFRAS-LGDAESE 135 (339)
T ss_dssp CHHHHHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEECCCCTTTSSCHHHHHHHH-HSCHHHH
T ss_pred chHHHHHHHHHHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcCCCccCccCCcCCccccc-ccCCHHH
Confidence 34555667777888899999999998653 4677888888888887766655544210000 000000 0011233
Q ss_pred HHHHHHH-h-ccCC-----CCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHH
Q 015784 193 QKELYAK-H-HHAA-----DGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVT 265 (400)
Q Consensus 193 ~~~~~~~-~-~~~~-----~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~ 265 (400)
..+.+.. . ...+ .+.+++.+..+.....-.+.++..++.|++.|+||.+|+.......+ .++
T Consensus 136 L~~~~~~e~~~gIg~tg~k~g~IEigld~~~~~~~q~~~f~aq~~lA~~~glPViiH~~~gr~a~~-----------~~~ 204 (339)
T 3gtx_A 136 IYEMMRTEVTEGIAGTGIRAGVIKLASSRDAITPYEQLFFRAAARVQRETGVPIITHTQEGQQGPQ-----------QAE 204 (339)
T ss_dssp HHHHHHHHHHTCSTTSSCCCSEEEEECCSSCCCHHHHHHHHHHHHHHHHHCCCEEEECSTTCCHHH-----------HHH
T ss_pred HHHHHHHHHHhcccccCcccceEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcCHHH-----------HHH
Confidence 3322222 1 1111 12234333333112222345788889999999999999954332111 445
Q ss_pred HHhHhCCCCCCeeeEEec-CCChhHHHHHHhcCCeEEECcccc--cc-----ccCcccHHHHHHcCC--cEEEcCCCCCC
Q 015784 266 FLDKIEFLQNNLLSAHTV-WVNHTEIGLLSRAGVKVSHCPASA--MR-----MLGFAPIKEMLHADI--CVSLGTDGAPS 335 (400)
Q Consensus 266 ~l~~~~~~~~~~~~~h~~-~~~~~~i~~~~~~~~~~~~~p~~~--~~-----~~~~~~~~~~~~~Gv--~v~~gtD~~~~ 335 (400)
+|...+....+.++.|+. .-+.++.+++.+.|..+.+.-... +. ......++++++++. ++.+.||.+..
T Consensus 205 iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~~G~~i~~~g~~t~~~~~~p~~~~~~~~l~~li~~~~~drilleTD~p~~ 284 (339)
T 3gtx_A 205 LLTSLGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDRIGLQGMVGTPTDAERLSVLTTLLGEGYADRLLLSHDSIWH 284 (339)
T ss_dssp HHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCSSTTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEEE
T ss_pred HHHHcCCCcccEEEEccCCCCCHHHHHHHHHcCcEEEEccCccccccCCCchHHHHHHHHHHHHhcCCCeEEEecCCCcc
Confidence 666666554456678998 467888889999999887754321 10 012234677888774 78999998731
Q ss_pred --C---------------CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 336 --N---------------NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 336 --~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
+ +.+... +.......+ ..+++.+++.++.|.||+++|+
T Consensus 285 ~~~~P~~~p~~~~~~~g~n~p~~l--~~~~~~~~~-----------~~Gis~e~i~~~~~~Np~rlf~ 339 (339)
T 3gtx_A 285 WLGRPPAIPEAALPAVKDWHPLHI--SDDILPDLR-----------RRGITEEQVGQMTVGNPARLFG 339 (339)
T ss_dssp ESSSCCCCCGGGHHHHHTCSTTHH--HHTHHHHHH-----------HTTCCHHHHHHHHTHHHHHHHC
T ss_pred ccCCcccccccccccCCCCCchhH--HHHHHHHHH-----------HcCCCHHHHHHHHHHHHHHHhC
Confidence 0 001111 111111111 2369999999999999999985
|
| >3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0 | Back alignment and structure |
|---|
Probab=98.97 E-value=5.7e-08 Score=86.53 Aligned_cols=239 Identities=13% Similarity=0.114 Sum_probs=139.2
Q ss_pred HHHHHHHHHHhcCcceeeccC----cCCHHHHHHHHHHcCCeEEEecccccCCCC---CCc-------------ccccCC
Q 015784 126 STLLCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEG---LPA-------------SWAVRT 185 (400)
Q Consensus 126 ~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~~~-------------~~~~~~ 185 (400)
.+...+..+.+.|++++.|.. +..+..+.+.+++.|++.+.+.+++...+. +.. .|....
T Consensus 47 ~~~~el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (330)
T 3pnz_A 47 KSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENT 126 (330)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECCCGGGGGSBCCGGGHHHHCSCSBHHHHHHTS
T ss_pred HHHHHHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCCccccccccccccccccccccccCchhhccC
Confidence 444566778889999999964 356788889999999999888777653211 111 111111
Q ss_pred chHHHHHHHHHHHHhcc-CCCCC-----eEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCC
Q 015784 186 TDDCIQSQKELYAKHHH-AADGR-----IRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV 259 (400)
Q Consensus 186 ~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~ 259 (400)
..+.+ ...++++... ..... +++....+.....-.+.++..++.|++.|+||.+|+.......+
T Consensus 127 ~~e~l--~~~~~~ei~~Gi~~t~vkaGvIEiGld~~~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~~a~~-------- 196 (330)
T 3pnz_A 127 TTDKL--TEFVVNEVENGLEGTPYKAGQVKFGTGYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALE-------- 196 (330)
T ss_dssp CHHHH--HHHHHHHHHTCSTTSSCCEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCCHHH--------
T ss_pred CHHHH--HHHHHHHHHhhCCCcCcCcCeEEEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcChHH--------
Confidence 11111 1122222222 11112 23322222222222345788889999999999999875322111
Q ss_pred CCChHHHHhHhCCCCCCeeeEEec-CCChhHHHHHHhcCCeEEECccccccc----cCcccHHHHHHcCC--cEEEcCCC
Q 015784 260 DHGTVTFLDKIEFLQNNLLSAHTV-WVNHTEIGLLSRAGVKVSHCPASAMRM----LGFAPIKEMLHADI--CVSLGTDG 332 (400)
Q Consensus 260 ~~~~~~~l~~~~~~~~~~~~~h~~-~~~~~~i~~~~~~~~~~~~~p~~~~~~----~~~~~~~~~~~~Gv--~v~~gtD~ 332 (400)
.++++...+....+.++.|+. .-+.+..+++.+.|..+.+.-...... .....++++.+.|. ++.+.||.
T Consensus 197 ---~l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~~G~~i~~~g~~t~~~~~~~~~~~~l~~lv~~g~~drilleTD~ 273 (330)
T 3pnz_A 197 ---QIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIAKIKYAPESARIAAILYLVSEGFEDQILVSGDT 273 (330)
T ss_dssp ---HHHHHHHTTCCGGGEEETTGGGSCCHHHHHHHHTTTCEEEECCTTCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred ---HHHHHHHcCCCCCeEEEecCCCCCCHHHHHHHHHcCcEEEEccCcccCCCChHHHHHHHHHHHHcCCCCeEEEeCCC
Confidence 345566666554456677996 557778888889999887763321111 11224677788773 79999998
Q ss_pred CCC--------CCCCCHH-HHHHHHH-HHhcccccccCCCCCCCCCCHHH-HHHHHhHHHHHHcCCC
Q 015784 333 APS--------NNRMSIV-DEMYLAS-LINKGREVFANGTTDPAALPAET-VLRMATINGAKSVLWD 388 (400)
Q Consensus 333 ~~~--------~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~-al~~~T~~~A~~lg~~ 388 (400)
+.. .+..... ....... ...+ ..|++.++ +.++.|.||+++|+++
T Consensus 274 p~~~~~~~~G~~~~~~~~~~~~~~~l~~~a~-----------~~Gis~ee~i~~~t~~Np~rlf~l~ 329 (330)
T 3pnz_A 274 ARKTYYKHYGHGPGLEYIAKKWVPRFIDEAN-----------EKGFDGEKLVKKFFVDNPARCFTFK 329 (330)
T ss_dssp CSGGGSHHHHCCSTTTHHHHTHHHHHHHHHH-----------HTTSCHHHHHHHHHTHHHHHHSSCC
T ss_pred CCCCCCCccCCCCCcchHHHHHHHHHHHHHH-----------HcCCCHHHHHHHHHHHhHHHHhcCC
Confidence 721 1111111 1110000 0001 23599998 9999999999999874
|
| >3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=98.97 E-value=1.5e-07 Score=82.21 Aligned_cols=140 Identities=8% Similarity=-0.019 Sum_probs=90.7
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEE
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~ 301 (400)
.+.+...+++|++.++||.+|+.+...+ .++++...+.... ..+.|+..-+.++++++.+.|..+.
T Consensus 113 ~~~F~~ql~lA~e~~lPv~iH~r~a~~~-------------~l~il~~~~~~~~-~~V~H~fsG~~e~a~~~l~~G~yis 178 (287)
T 3rcm_A 113 EKALEAQLTLAAQLRLPVFLHERDASER-------------LLAILKDYRDHLT-GAVVHCFTGEREALFAYLDLDLHIG 178 (287)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHTTGGGCS-CEEECSCCCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcHHH-------------HHHHHHHcCCCCC-eEEEEeCCCCHHHHHHHHHCCcEEE
Confidence 4568888999999999999999765432 3444554433211 2356987768888999999999998
Q ss_pred ECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC-C------------CCHHHHHHHHHHHhcccccccCCCCCCC
Q 015784 302 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN-R------------MSIVDEMYLASLINKGREVFANGTTDPA 366 (400)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~-~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (400)
+.....+. .....++++++. + =++.+.||.|-..+ + ..+..-++..... .
T Consensus 179 ~~g~i~~~-k~~~~l~~~v~~ip~drlLlETD~P~l~p~~~~~~~rg~~n~P~~l~~v~~~lA~~--------------~ 243 (287)
T 3rcm_A 179 ITGWICDE-RRGTHLHPLVGNIPEGRLMLESDAPYLLPRSLRPKPKSGRNEPAFLPEVLREVALH--------------R 243 (287)
T ss_dssp ECGGGGCT-TTCGGGHHHHTTSCTTSEEECCCTTSCCCTTCSSCCTTCCCCGGGHHHHHHHHHHH--------------H
T ss_pred ECchhccc-cCHHHHHHHHHhcCCccEEEeccCCccCccccccccCCCcCCHHHHHHHHHHHHHH--------------h
Confidence 87543320 122335555554 2 37899999873211 0 0111212221111 1
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCC
Q 015784 367 ALPAETVLRMATINGAKSVLWDND 390 (400)
Q Consensus 367 ~l~~~~al~~~T~~~A~~lg~~~~ 390 (400)
+++++++.++.|.|+.+++|++..
T Consensus 244 g~s~eev~~~~~~N~~rlf~l~~~ 267 (287)
T 3rcm_A 244 GESAEHTAAHTTATARDFFQLPAE 267 (287)
T ss_dssp TSCHHHHHHHHHHHHHHHTTCCCC
T ss_pred CcCHHHHHHHHHHHHHHHHCCChh
Confidence 489999999999999999998753
|
| >1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12 | Back alignment and structure |
|---|
Probab=98.96 E-value=2e-07 Score=81.05 Aligned_cols=137 Identities=12% Similarity=-0.011 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.+...++.|++.|++|.+|+.+...+ .++.+...+....+. +.|+..-+.+.++.+.+.|+.+.+
T Consensus 112 ~~f~~~l~~a~~~~lpv~iH~~~a~~~-------------~~~il~~~~~~~~~~-v~H~~~g~~~~~~~~~~~g~yi~~ 177 (264)
T 1xwy_A 112 RAFVAQLRIAADLNMPVFMHCRDAHER-------------FMTLLEPWLDKLPGA-VLHCFTGTREEMQACVAHGIYIGI 177 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHGGGGGGSSCE-EECSCCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEcCCchHH-------------HHHHHHhcCCCCCcE-EEEccCCCHHHHHHHHHCCeEEEE
Confidence 357888999999999999999643221 334555544322234 449876677888888889999888
Q ss_pred CccccccccCcccHHHHHHcC--CcEEEcCCCCCCCCC------------CCHH-HHHHHHHHHhcccccccCCCCCCCC
Q 015784 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSNNR------------MSIV-DEMYLASLINKGREVFANGTTDPAA 367 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~G--v~v~~gtD~~~~~~~------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (400)
..... .......++.+++.. =++.++||+|...+. ...+ ..+...... .+
T Consensus 178 ~g~~~-~~~~~~~l~~~~~~~~~drll~eTD~P~~~~~~~~~~~~g~~n~p~~~~~~~~~~a~~--------------~g 242 (264)
T 1xwy_A 178 TGWVC-DERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQRIAHW--------------RG 242 (264)
T ss_dssp CGGGG-CTTTSHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHHHHHH--------------HT
T ss_pred Ccccc-CCcCcHHHHHHHHhCCHHHEEEecCCCCcCccccccccCCCCCchHHHHHHHHHHHHH--------------HC
Confidence 74322 011222355566543 379999999742111 0111 222221111 14
Q ss_pred CCHHHHHHHHhHHHHHHcCCC
Q 015784 368 LPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 368 l~~~~al~~~T~~~A~~lg~~ 388 (400)
++++++.++.+.|+++++|++
T Consensus 243 ~~~e~~~~~~~~Na~rl~~l~ 263 (264)
T 1xwy_A 243 EDAAWLAATTDANVKTLFGIA 263 (264)
T ss_dssp CCHHHHHHHHHHHHHHHHCCC
T ss_pred cCHHHHHHHHHHHHHHHhCcc
Confidence 899999999999999999874
|
| >1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12 | Back alignment and structure |
|---|
Probab=98.94 E-value=3.7e-08 Score=85.78 Aligned_cols=138 Identities=13% Similarity=0.132 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEE
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~ 301 (400)
.+.+...++.|.++|++|.+|+.+...+ .++.+...+....+.+ .|+.....+.++.+.+.|+.+.
T Consensus 110 ~~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~~~p~~~~v-~H~~~~~~~~~~~~~~~g~~~~ 175 (265)
T 1yix_A 110 QESFIHHIQIGRELNKPVIVHTRDARAD-------------TLAILREEKVTDCGGV-LHCFTEDRETAGKLLDLGFYIS 175 (265)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHTTGGGTCEE-ETTCCSCHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEecCchHH-------------HHHHHHhcCCCCCCEE-EEcCCCCHHHHHHHHHCCcEEE
Confidence 3568888899999999999999754332 3345555443333444 4988778888898988999988
Q ss_pred ECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC---------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 015784 302 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN---------RMSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (400)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (400)
+++...+ .....++.+++. | -++.+|||+|...+ ...+...+...... .+++.
T Consensus 176 ~sg~~~~--~~~~~~~~~~~~~~~drll~~TD~P~~~~~~~~g~~~~~~~l~~~~~~l~~~--------------~~~~~ 239 (265)
T 1yix_A 176 FSGIVTF--RNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVL--------------KGVAV 239 (265)
T ss_dssp ECGGGGS--TTCHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHHHHH--------------HTSCH
T ss_pred ECCcccc--CchHHHHHHHHhCChHHEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHHH--------------hCcCH
Confidence 8764322 122345566665 4 48999999974311 11122223222111 14899
Q ss_pred HHHHHHHhHHHHHHcCCCC
Q 015784 371 ETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 371 ~~al~~~T~~~A~~lg~~~ 389 (400)
+++.++++.|+++++|++.
T Consensus 240 ~~~~~i~~~Na~rl~~l~~ 258 (265)
T 1yix_A 240 EELAQVTTDNFARLFHIDA 258 (265)
T ss_dssp HHHHHHHHHHHHHHTTCCG
T ss_pred HHHHHHHHHHHHHHhCcCh
Confidence 9999999999999999863
|
| >3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis} | Back alignment and structure |
|---|
Probab=98.92 E-value=7.8e-08 Score=86.93 Aligned_cols=234 Identities=10% Similarity=0.025 Sum_probs=135.4
Q ss_pred HHHHHHHHHHhcCcceeeccC-----cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHH-HH
Q 015784 126 STLLCGIELIHSGVTCFAEAG-----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELY-AK 199 (400)
Q Consensus 126 ~~~~~~~~~l~~GvTt~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 199 (400)
.+...+.++.+.|++++.+.+ +.....+.+.++..|+..+...+++... +.+.+... .+....+.+ ++
T Consensus 76 ~~~~el~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~~~--~~P~~~~~----~~~~L~~~~~~e 149 (365)
T 3rhg_A 76 DVIFELNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLYIEK--FEGKRLAD----DIDAMAKMIDDE 149 (365)
T ss_dssp HHHHHHHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCCCHH--HHGGGGGS----CHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCccCCC--CCchhhcC----CHHHHHHHHHHH
Confidence 344566889999999999976 3467777888888898776665544211 00112111 223232222 22
Q ss_pred hcc-C-----CCCCeEEEeeccccccCCH---HHHHHHHHHHHHc-CCeeeEec-CCCchhhhHHhhhcCCCCChHHHHh
Q 015784 200 HHH-A-----ADGRIRIWFGIRQIMNATD---RLLLETRDMAREF-KTGIHMHV-AEIPYENQVVMDTRKVDHGTVTFLD 268 (400)
Q Consensus 200 ~~~-~-----~~~~~~~~~~~~~~~~~~~---e~l~~~~~~a~~~-~~~v~~H~-~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (400)
+.. . ..+.++ -++... ..++ +.++..++.|++. |+||.+|+ .......+ .++.+.
T Consensus 150 i~~gi~~t~vkag~IG-EiGld~--~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e-----------~l~iL~ 215 (365)
T 3rhg_A 150 LNIGIDGTDIRAGMIG-EIGVSP--FFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDE-----------VLDILL 215 (365)
T ss_dssp HHTCSTTSSCCCCEEE-EEECCT--TCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHH-----------HHHHHT
T ss_pred HHhccccCCceeEEEE-EEEcCC--CCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHH-----------HHHHHH
Confidence 221 1 112221 123321 2233 4578888899999 99999998 42222111 445555
Q ss_pred Hh-CCCCCCeeeEEec-C-CChhHHHHHHhcCCeEEECccc-cccc----------cCcccHHHHHHcCC--cEEEcCCC
Q 015784 269 KI-EFLQNNLLSAHTV-W-VNHTEIGLLSRAGVKVSHCPAS-AMRM----------LGFAPIKEMLHADI--CVSLGTDG 332 (400)
Q Consensus 269 ~~-~~~~~~~~~~h~~-~-~~~~~i~~~~~~~~~~~~~p~~-~~~~----------~~~~~~~~~~~~Gv--~v~~gtD~ 332 (400)
.. +....+.++.|+. . -+.+..+++.+.|..+.+.-.. ...+ .....+++++++|. ++.+.||.
T Consensus 216 e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g~g~~~tf~~~~~~~~d~~~a~~l~~li~~g~~drilleTD~ 295 (365)
T 3rhg_A 216 TEMGCDPAKISLAHSDPSGKDIDYQCKMLDRGVWLEFDMIGLDISFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSHDV 295 (365)
T ss_dssp TTTCCCGGGEEESCCGGGTTCHHHHHHHHHTTCEEEECCTTCCCBCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred hccCCCCCceEEecCCCCCCCHHHHHHHHhCCCEEEecCCCccccccccccccchHHHHHHHHHHHHhCCCCcEEEeCCC
Confidence 54 5443456678999 4 5778888899999998776321 0011 11234677888884 79999998
Q ss_pred CCCCC-----CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCC
Q 015784 333 APSNN-----RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDND 390 (400)
Q Consensus 333 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~ 390 (400)
+...+ ...+..-+........ ..|++.+++.++.|.||+++|++..+
T Consensus 296 p~l~~~~~~G~~~~~~l~~~~~~~~~-----------~~Gis~e~i~~~~~~Np~rlf~l~~~ 347 (365)
T 3rhg_A 296 FLKQMWAKNGGNGWGFVPNVFLSLLA-----------QRGIDKTIIDKLCIDNPANLLAAENL 347 (365)
T ss_dssp CSGGGSGGGTSCTTTHHHHTHHHHHH-----------HTTCCHHHHHHHTTHHHHHHHHSCCS
T ss_pred CCCCCCCcCCCCCchhHHHHHHHHHH-----------HcCCCHHHHHHHHHHHHHHHHCCCCc
Confidence 63210 0111111111111111 23699999999999999999998753
|
| >3lgd_A Adenosine deaminase CECR1; TIM barrel, dimerization and receptor binding domains, glyco hydrolase, growth factor, secreted; HET: NAG; 2.00A {Homo sapiens} PDB: 3lgg_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=3.8e-07 Score=85.31 Aligned_cols=117 Identities=11% Similarity=0.120 Sum_probs=82.4
Q ss_pred CHHHHHHHHHH--HHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHHhHhCCCCCCeeeEEecCCC--hhHHHHHHh
Q 015784 221 TDRLLLETRDM--AREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSR 295 (400)
Q Consensus 221 ~~e~l~~~~~~--a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~ 295 (400)
+++.+..+++. +++.|+++.+|+.|...... .....+ +.+ . ++. ..+.|+..+. +++++++++
T Consensus 307 p~~~f~~~f~~~~A~~~gl~~t~HAGE~~~~g~-------~~~~~i~~Al-~---Lga-~RIgHGv~l~~dp~l~~~l~~ 374 (508)
T 3lgd_A 307 SLHDYKEALMIPAKDGVKLPYFFHAGETDWQGT-------SIDRNILDAL-M---LNT-TRIGHGFALSKHPAVRTYSWK 374 (508)
T ss_dssp CTGGGHHHHTHHHHTTCCCCBCCEECCSSCCSS-------TTTTHHHHHH-H---TTC-SSEEECTTGGGCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCceeeecccccCCCC-------CcHHHHHHHH-h---cCC-ceeeeeEecCccHHHHHHHHh
Confidence 45567777777 78999999999998753110 000012 222 2 232 3579999985 788999999
Q ss_pred cCCeEEECcccccccc---C--cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHH
Q 015784 296 AGVKVSHCPASAMRML---G--FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLAS 349 (400)
Q Consensus 296 ~~~~~~~~p~~~~~~~---~--~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~ 349 (400)
.++.+.+||.||..+. + ..|++.|+++|++|+++||.+......++.++...+.
T Consensus 375 ~~I~levCP~SN~~l~~v~~~~~hP~~~ll~~Gv~V~l~TDdp~~f~~~~Ls~Ey~~a~ 433 (508)
T 3lgd_A 375 KDIPIEVCPISNQVLKLVSDLRNHPVATLMATGHPMVISSDDPAMFGAKGLSYDFYEVF 433 (508)
T ss_dssp TTCCEEECHHHHHHTTSCSSGGGCTHHHHHHTTCCEEECCBSHHHHTCCTTHHHHHHHH
T ss_pred cCCeEEECcchHHHhCCCCCcccChHHHHHHCCCcEEEcCCCccccCCCchHHHHHHHH
Confidence 9999999999998763 2 3599999999999999999875422223555655443
|
| >2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.56 E-value=6.4e-06 Score=72.87 Aligned_cols=139 Identities=12% Similarity=0.017 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.++..+++|++.++||.+|+.+...+ .++++...+. ....++.|+..-+.+.++.+.+.|+.+.+
T Consensus 127 ~~f~~ql~lA~~~~lPv~iH~r~a~~~-------------~~~il~~~~~-~~~~~i~H~f~g~~~~~~~~l~~g~yi~~ 192 (301)
T 2xio_A 127 KYFEKQFELSEQTKLPMFLHCRNSHAE-------------FLDITKRNRD-RCVGGVVHSFDGTKEAAAALIDLDLYIGF 192 (301)
T ss_dssp HHHHHTHHHHHHHCCCEEEEEESCHHH-------------HHHHHHHTGG-GSSCEEETTCCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhCCcEEEEecCchHH-------------HHHHHHhccC-CCCcEEEEccCCCHHHHHHHHhcCcEEEE
Confidence 467888899999999999999654322 3455555432 11345689877678888888899999888
Q ss_pred CccccccccCcccHHHHHHcC--CcEEEcCCCCCCC------------------------------CCCC-HHHHHHHHH
Q 015784 303 CPASAMRMLGFAPIKEMLHAD--ICVSLGTDGAPSN------------------------------NRMS-IVDEMYLAS 349 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~G--v~v~~gtD~~~~~------------------------------~~~~-~~~~~~~~~ 349 (400)
... .++ ... ..++++.. =++.++||.|-.. +... +...+....
T Consensus 193 ~g~-~~~--~~~-~~~~~~~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~~~~~~~g~~~~~~n~p~~v~~~~~~ia 268 (301)
T 2xio_A 193 NGC-SLK--TEA-NLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKKWESGHCLKDRNEPCHIIQILEIMS 268 (301)
T ss_dssp CGG-GSS--SHH-HHHHHHTSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCEESSCCTTSEETTCCCGGGHHHHHHHHH
T ss_pred ccc-ccC--ChH-HHHHHHhCChHHEEEecCCCcccccccccccccccccCcccccccccccCCCCCChHHHHHHHHHHH
Confidence 754 111 111 23455542 3789999997321 0011 112222211
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcccc
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSL 394 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i 394 (400)
.+ .+++.+++.+..+.|+.+++++.. +|.|
T Consensus 269 ~l--------------~g~~~e~~~~~~~~Na~rlf~~~~-~~~~ 298 (301)
T 2xio_A 269 AV--------------RDEDPLELANTLYNNTIKVFFPVI-AENL 298 (301)
T ss_dssp HH--------------HTCCHHHHHHHHHHHHHHHHCCC------
T ss_pred HH--------------HCcCHHHHHHHHHHHHHHHhCchh-hhhc
Confidence 11 148999999999999999999875 4643
|
| >4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii} | Back alignment and structure |
|---|
Probab=98.54 E-value=5.7e-06 Score=72.97 Aligned_cols=140 Identities=7% Similarity=-0.047 Sum_probs=81.0
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC---------hhHH
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---------HTEI 290 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~---------~~~i 290 (400)
...+.+...++.|++.|+++.+|+.... ... ..+.+.+.. .+.++.|+.... .+.+
T Consensus 134 ~~~~~~~~~~~~a~~~glpv~iH~~~~~--l~~----------~~~~l~~~p---~~~Vi~H~g~p~~~~g~~~~~~~~~ 198 (294)
T 4i6k_A 134 LNTPDWQKFLRNVESLNWQVELHAPPKY--LVQ----------LLPQLNEYS---FDVVIDHFGRVDPVKGIEDPDYQKF 198 (294)
T ss_dssp SSSHHHHHHHHHHHHTTCEEEEECCHHH--HHH----------HHHHHTTSS---SCEEESGGGCCCTTTCTTCHHHHHH
T ss_pred cccHHHHHHHHHHHHcCCEEEEeeCcch--HHH----------HHHHHHHCC---CCEEEECCCCCCCCCCCCCHHHHHH
Confidence 3457899999999999999999996422 110 223344433 367888988743 1234
Q ss_pred HHHHhc-CCeEEECccccccccC------cccHHHHHH-cC-CcEEEcCCCCCCCCC--CCHHHHHHHHHHHhccccccc
Q 015784 291 GLLSRA-GVKVSHCPASAMRMLG------FAPIKEMLH-AD-ICVSLGTDGAPSNNR--MSIVDEMYLASLINKGREVFA 359 (400)
Q Consensus 291 ~~~~~~-~~~~~~~p~~~~~~~~------~~~~~~~~~-~G-v~v~~gtD~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 359 (400)
..+.+. |+.+.+.-.......+ ...++++++ .| =++.+|||+|..... .+....+.....+
T Consensus 199 ~~l~~~~nv~~k~Sg~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~~~~~~y~~~~~~l~~~-------- 270 (294)
T 4i6k_A 199 LSLLNVKQHWIKVSGFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHTQHESLITYEDAIKAFKQI-------- 270 (294)
T ss_dssp HHHCCTTTEEEECCCGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCTTCTTTCCHHHHHHHHHHH--------
T ss_pred HHHHhCCCEEEEecccccccccCCCchhhHHHHHHHHHHhCcccEEEeCCCCCCCCcCCCCHHHHHHHHHHH--------
Confidence 444443 6655543221110000 123455544 45 489999999854322 2332222222111
Q ss_pred CCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 360 NGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 360 ~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
.++.++.-+....|+++++|+++
T Consensus 271 -------~~~~~~~~~i~~~NA~rl~~l~~ 293 (294)
T 4i6k_A 271 -------VFDKHEQCLILNQNPTELFGFSR 293 (294)
T ss_dssp -------CCCHHHHHHHHTHHHHHHHTC--
T ss_pred -------CCCHHHHHHHHHHCHHHHhCCCC
Confidence 27899999999999999999863
|
| >2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=98.48 E-value=8.2e-06 Score=70.80 Aligned_cols=140 Identities=14% Similarity=0.059 Sum_probs=84.6
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHh-cCCe
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR-AGVK 299 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~-~~~~ 299 (400)
..+.+...++.|.+.|++|.+|+.....+ .++.+.+.+....+. +.|+..-+.+.+..+.+ .|+.
T Consensus 107 ~~~~~~~~~~~a~~~~~pv~iH~~~~~~~-------------~~~~l~~~p~~~~~~-i~H~~~g~~~~~~~~l~~~~~y 172 (265)
T 2gzx_A 107 QKEVFRKQIALAKRLKLPIIIHNREATQD-------------CIDILLEEHAEEVGG-IMHSFSGSPEIADIVTNKLNFY 172 (265)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHTTGGGTCE-EETTCCSCHHHHHHHHHTSCCE
T ss_pred HHHHHHHHHHHHHHcCCcEEEEecccHHH-------------HHHHHHhcCCCCCcE-EEEcCCCCHHHHHHHHHHCCce
Confidence 34568889999999999999999754321 345555554222344 45666545666666666 7888
Q ss_pred EEECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCCC--------CCHHHHHHHHHHHhcccccccCCCCCCCCCC
Q 015784 300 VSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNR--------MSIVDEMYLASLINKGREVFANGTTDPAALP 369 (400)
Q Consensus 300 ~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 369 (400)
+.+...... .....++.+++. | =++.+|||+|..... .......... +.. ..+++
T Consensus 173 ~~~sg~~~~--~~~~~~~~~i~~~~~dril~gSD~P~~~~~~~~g~~~~~~~~~~~~~~--l~~-----------~~~~~ 237 (265)
T 2gzx_A 173 ISLGGPVTF--KNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQ--IAE-----------LKGLS 237 (265)
T ss_dssp EEECGGGGC--SSCCHHHHHHHHSCTTTEEECCCTTSCCCTTCTTSCCCGGGHHHHHHH--HHH-----------HTTCC
T ss_pred EEecceeec--CCcHHHHHHHHhCChhhEEEccCCCCCCCcccCCCCCChHHHHHHHHH--HHH-----------HhCCC
Confidence 887644222 122345666654 4 489999999743110 0111111111 110 02489
Q ss_pred HHHHHHHHhHHHHHHcCCCC
Q 015784 370 AETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 370 ~~~al~~~T~~~A~~lg~~~ 389 (400)
.++.-++.+.|+++++++..
T Consensus 238 ~~~~~~i~~~Na~rl~~~~~ 257 (265)
T 2gzx_A 238 YEEVCEQTTKNAEKLFNLNS 257 (265)
T ss_dssp HHHHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHHhCCch
Confidence 99999999999999999865
|
| >1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12 | Back alignment and structure |
|---|
Probab=98.45 E-value=1.5e-06 Score=75.72 Aligned_cols=137 Identities=13% Similarity=0.095 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEE
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~ 301 (400)
.+.+...++.|.+.|++|.+|+.+.... .++.+.+.+....+.++ |+..-..+.++.+.+.|+.+.
T Consensus 119 ~~~f~~~~~~a~~~~lPv~iH~~~~~~~-------------~~~il~~~p~~~~~~I~-H~~~g~~~~~~~~~~~g~y~~ 184 (268)
T 1j6o_A 119 KRVFVEQIELAGKLNLPLVVHIRDAYSE-------------AYEILRTESLPEKRGVI-HAFSSDYEWAKKFIDLGFLLG 184 (268)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHSCCCSSCEEE-TTCCSCHHHHHHHHHHTEEEE
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCchHHH-------------HHHHHHhcCCCCCCEEE-EcCCCCHHHHHHHHHCCCeEE
Confidence 4568888999999999999998754322 34555655432335565 987767778888888898887
Q ss_pred ECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC--------CCCHHHH-HHHHHHHhcccccccCCCCCCCCCCH
Q 015784 302 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN--------RMSIVDE-MYLASLINKGREVFANGTTDPAALPA 370 (400)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (400)
+.....+ .....++.+++. + =++.++||+|...+ ....+.. +...... .+++.
T Consensus 185 ~sg~~~~--~~~~~l~~~i~~~~~driL~eTD~P~~~~~~~~g~~n~p~~~~~~~~~la~~--------------~~~~~ 248 (268)
T 1j6o_A 185 IGGPVTY--PKNEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETISQV--------------LGVPE 248 (268)
T ss_dssp ECGGGGC--TTCHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHHHHHHH--------------HTSCH
T ss_pred ecccccc--cchHHHHHHHHhCChhhEEEecCCCCCCCcccCCCCCchHHHHHHHHHHHHH--------------hCcCH
Confidence 7644322 112235555544 3 48999999874311 0111111 1111111 14899
Q ss_pred HHHHHHHhHHHHHHcCCC
Q 015784 371 ETVLRMATINGAKSVLWD 388 (400)
Q Consensus 371 ~~al~~~T~~~A~~lg~~ 388 (400)
++.-+..+.|+.+++++.
T Consensus 249 e~~~~i~~~Na~rlf~l~ 266 (268)
T 1j6o_A 249 AKVDEATTENARRIFLEV 266 (268)
T ss_dssp HHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhCcc
Confidence 999999999999999874
|
| >3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0 | Back alignment and structure |
|---|
Probab=98.44 E-value=2.2e-06 Score=73.23 Aligned_cols=134 Identities=16% Similarity=0.032 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHcCCeee-EecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEE
Q 015784 223 RLLLETRDMAREFKTGIH-MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVS 301 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~-~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~ 301 (400)
+.++..+++|++.++||. +|+-+...+ .++++...+. ...++.|+..-+.++++++.+.|..++
T Consensus 104 ~~F~~ql~lA~e~~lPviSiH~r~a~~~-------------~~~il~~~~~--~~~~v~H~fsG~~e~a~~~l~~G~yis 168 (254)
T 3gg7_A 104 AVFQHILRRCEDHGGRILSIHSRRAESE-------------VLNCLEANPR--SGTPILHWYSGSVTELRRAISLGCWFS 168 (254)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECTTCHHH-------------HHHHHHHCGG--GEEEEEETCCSCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEEcCCcHHH-------------HHHHHHHcCC--CCcEEEEeCCCCHHHHHHHHcCCcEEE
Confidence 457888899999999998 999765432 4455555432 113466988878889999999999998
Q ss_pred ECccccccccCcccHHHHHHc-C-CcEEEcCCCCCC------CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHH
Q 015784 302 HCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPS------NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373 (400)
Q Consensus 302 ~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a 373 (400)
+.+... + ...++++++. + =++.+.||+|.. +.+..+..-......+ .+++++++
T Consensus 169 ~~g~~~-~---~~~~~~~v~~ip~drlLlETD~P~~~~rg~~n~P~~v~~v~~~iA~~--------------~g~~~ee~ 230 (254)
T 3gg7_A 169 VGPTMV-R---TQKGAALIRSMPRDRVLTETDGPFLELDGQAALPWDVKSVVEGLSKI--------------WQIPASEV 230 (254)
T ss_dssp ECHHHH-T---SHHHHHHHHHSCGGGEEECCCTTTSEETTEECCGGGHHHHHHHHHHH--------------HTSCHHHH
T ss_pred ECcccC-c---hHHHHHHHHHcCCCeEEEeCCCCccccCCCCCCHHHHHHHHHHHHHH--------------hCcCHHHH
Confidence 876543 1 1123444433 2 368999999732 1111122222222111 14899999
Q ss_pred HHHHhHHHHHHcCCCC
Q 015784 374 LRMATINGAKSVLWDN 389 (400)
Q Consensus 374 l~~~T~~~A~~lg~~~ 389 (400)
.+..+.|+.+++++..
T Consensus 231 ~~~~~~N~~~lf~~~~ 246 (254)
T 3gg7_A 231 ERIVKENVSRLLGTVR 246 (254)
T ss_dssp HHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHCCCc
Confidence 9999999999998863
|
| >3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1} | Back alignment and structure |
|---|
Probab=98.44 E-value=2.7e-05 Score=68.82 Aligned_cols=218 Identities=8% Similarity=0.027 Sum_probs=119.7
Q ss_pred HHHHhcCcceeeccCcCC--HHHHHHHHHHcC----CeEEEecccccCCCCCCcccccCCchH-HHHHHHHHHHHhccCC
Q 015784 132 IELIHSGVTCFAEAGGQH--VSEMAKAVELLG----LRACLVQSTMDCGEGLPASWAVRTTDD-CIQSQKELYAKHHHAA 204 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~~~--~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 204 (400)
.++.+.||..+...+... .....+.++..+ +..+...++ -+.+....... .+....++++...
T Consensus 59 ~rA~~aGV~~ii~~g~~~~~~~~~~~La~~~~~~~~~~v~~~~Gi-------HP~~~~~~~~~~~l~~L~~l~~~~~--- 128 (325)
T 3ipw_A 59 QRAERNGLSHIIITSGCLNDFKKAIEIINKYQNLTNIKLVTTIGV-------HPTRTNELKQEGYLDELLLLCEKNI--- 128 (325)
T ss_dssp HHHHHTTEEEEEECCCSHHHHHHHHHHHHHHGGGCSSEEEEEECC-------CGGGGGGGGSTTHHHHHHHHHHHTG---
T ss_pred HHHHHcCCcEEEEccCCHHHHHHHHHHHHHCCCcccceEEEEEEE-------CcchhhcCCchHHHHHHHHHHhcCC---
Confidence 557888999999877432 233455555543 133322222 22222111111 3444444443311
Q ss_pred CCCeEE-Eeeccccc-c-CC----HHHHHHHHHHHHH-cCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCC
Q 015784 205 DGRIRI-WFGIRQIM-N-AT----DRLLLETRDMARE-FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN 276 (400)
Q Consensus 205 ~~~~~~-~~~~~~~~-~-~~----~e~l~~~~~~a~~-~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 276 (400)
...+.+ -+++.... . .+ .+.++..+++|++ .++||.+|+-+...+ .+++|...+....+
T Consensus 129 ~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~A~~d-------------~l~iL~~~~~~~~~ 195 (325)
T 3ipw_A 129 DKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRKSWSD-------------LCQLNKELGYNGCK 195 (325)
T ss_dssp GGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEESCHHH-------------HHHHHHHTTCTTSC
T ss_pred CCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCchHHH-------------HHHHHHhcCCCCCc
Confidence 011111 13333322 1 12 2457788899999 999999999765432 45566655432223
Q ss_pred eeeEEecCCChhHHHHHHhcCCeEEECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC-----------------
Q 015784 277 LLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN----------------- 337 (400)
Q Consensus 277 ~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~----------------- 337 (400)
.+.|+..=+.++++++.+.|..+++...+ ++ ....+ ++++. . =++.+-||+|-..+
T Consensus 196 -gViH~FsGs~e~a~~~l~lG~yis~~G~~-~k--~~~~~-~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r 270 (325)
T 3ipw_A 196 -GVVHCFDGTEEEMNQILNEGWDIGVTGNS-LQ--SIELL-NVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGV 270 (325)
T ss_dssp -EEECSCCCCHHHHHHHHHTTCEEEECSGG-GS--SHHHH-HHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCB
T ss_pred -EEEEECCCCHHHHHHHHhcCcEEeeCccc-cC--cHHHH-HHHHhCCcccEEEeCCCccccccccccchhcccccCccc
Confidence 35699988899999999999999888652 22 11112 23222 2 25889999873200
Q ss_pred ------------CC-CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 338 ------------RM-SIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 338 ------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
.. .+..-...+..+... .+++++++.+..+.|.-+++++.
T Consensus 271 ~~~k~~~~~~~g~rNeP~~v~~v~~~iA~l-----------~g~~~eeva~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 271 KVEKYQRNKYVQRRNEPSNIIDIAIIMSSI-----------KHISLFEFVNKVYSNSMNMYFPT 323 (325)
T ss_dssp CGGGCCTTSCBTTCCCGGGHHHHHHHHHHH-----------HTCCHHHHHHHHHHHHHHHHSCC
T ss_pred cccccccccccCCcCcHHHHHHHHHHHHHh-----------hCcCHHHHHHHHHHHHHHHhCcC
Confidence 00 011111222222111 14899999999999999999864
|
| >2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15 | Back alignment and structure |
|---|
Probab=98.43 E-value=7.4e-06 Score=72.04 Aligned_cols=139 Identities=12% Similarity=0.010 Sum_probs=81.8
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC---------hhH
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN---------HTE 289 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~---------~~~ 289 (400)
....+.+..+++.|.++|++|.+|+..... .. ..+.+.+.. .+.++.|+.... .+.
T Consensus 120 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~--~~----------~~~~~~~~p---l~~vi~H~g~~~~~~~~~~~~~~~ 184 (288)
T 2ffi_A 120 DLTGAQWRPLLERIGEQGWHVELHRQVADI--PV----------LVRALQPYG---LDIVIDHFGRPDARRGLGQPGFAE 184 (288)
T ss_dssp CTTSTTTHHHHHHHHHHTCEEEECSCTTTH--HH----------HHHHHTTTT---CCEEESGGGSCCTTSCTTCTTHHH
T ss_pred CcccHHHHHHHHHHHHCCCeEEEeechhhH--HH----------HHHHHHHCC---CCEEEECCCCCCCCCCCCChhHHH
Confidence 344457889999999999999999875421 00 234444444 357788988754 234
Q ss_pred HHHHHhc-CCeEEECccccccccCc---------ccHHHHHHc-C-CcEEEcCCCCCCCCC--CCHHHHHHHHHHHhccc
Q 015784 290 IGLLSRA-GVKVSHCPASAMRMLGF---------APIKEMLHA-D-ICVSLGTDGAPSNNR--MSIVDEMYLASLINKGR 355 (400)
Q Consensus 290 i~~~~~~-~~~~~~~p~~~~~~~~~---------~~~~~~~~~-G-v~v~~gtD~~~~~~~--~~~~~~~~~~~~~~~~~ 355 (400)
+..+.+. |+.+.+..... .... ..++.+++. | =++.+|||+|..... .++...+.....+
T Consensus 185 ~~~l~~~~n~y~~~sg~~~--~~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD~P~~~~~~~~~~~~~~~~~~~~---- 258 (288)
T 2ffi_A 185 LLTLSGRGKVWVKVSGIYR--LQGSPEENLAFARQALCALEAHYGAERLMWGSDWPHTQHESEVSFGSAVEQFEAL---- 258 (288)
T ss_dssp HTTCCCCSCEEEEEECGGG--SSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCTTCTTCTTTCCHHHHHHHHHHH----
T ss_pred HHHHHhCCCEEEEeCcchh--hccccCCCHHHHHHHHHHHHHHhCCCceEEecCCCCCCCCCCCCHHHHHHHHHHH----
Confidence 4444333 44444332111 1110 235556554 6 489999999854211 2222222222111
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
+++.++.-+....|++++++++.
T Consensus 259 -----------~~~~~~~~~i~~~NA~rl~~l~~ 281 (288)
T 2ffi_A 259 -----------GCSAQLRQALLLDTARALFGFEL 281 (288)
T ss_dssp -----------CCCHHHHHHHHTHHHHHHTTCCC
T ss_pred -----------CCCHHHHHHHHHHCHHHHhCccc
Confidence 25888999999999999999864
|
| >3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304} | Back alignment and structure |
|---|
Probab=98.21 E-value=8.7e-06 Score=69.97 Aligned_cols=149 Identities=12% Similarity=0.142 Sum_probs=79.9
Q ss_pred eeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHH
Q 015784 212 FGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIG 291 (400)
Q Consensus 212 ~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~ 291 (400)
++.......-.+.++..+++|++.++||.+|+...... +... ..++++...+....+.++.|+ +.+.++
T Consensus 99 iGLD~~~~~Q~~~f~~ql~lA~e~~lPv~iH~r~~~~~-~a~~-------~~~~il~~~~~~~~~~vi~H~---~~~~a~ 167 (261)
T 3guw_A 99 IGLELVTDEEIEVLKSQLELAKRMDVPCIIHTPRGNKL-KATR-------KTLEILESLDFPADLAVIDHV---NFETLD 167 (261)
T ss_dssp EECSSCCHHHHHHHHHHHHHHHHHTCCEEEECCSSSTT-HHHH-------HHHHHHHHTTCCTTSEEEESC---CTTTHH
T ss_pred ecCCCChHHHHHHHHHHHHHHHHhCCeEEEEcCCCccc-chHH-------HHHHHHHHcCCCCCCEEEEeC---CHHHHH
Confidence 34443322234468889999999999999999754200 0000 145667776654445567798 677888
Q ss_pred HHHhcCCeEEEC--ccccccccCcccHHHHHH-cC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCC
Q 015784 292 LLSRAGVKVSHC--PASAMRMLGFAPIKEMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAA 367 (400)
Q Consensus 292 ~~~~~~~~~~~~--p~~~~~~~~~~~~~~~~~-~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (400)
++.+.|..+.+. |.. ..... .+++.+ -+ =++.+.||+|...+ .+..-......+.. -.+
T Consensus 168 ~~l~~G~yis~~~~pg~-~t~~~---~~~~v~~ipldrlLlETD~P~~pn--~P~~v~~~~~~la~-----------~~g 230 (261)
T 3guw_A 168 MVLETEYWIGLTVQPGK-LSAED---AARIVAEHGPERFMLNSDAGYRDV--EITTVAEAAVKIEE-----------AVG 230 (261)
T ss_dssp HHHTSSSEEEEECC--------C---CTTGGGGCC-CCEEEECCCCCC--------CCCCTTHHHH-----------HCT
T ss_pred HHHhCCEEEEecCCCCc-ccHHH---HHHHHHhCCcceEEEecCCCCCCC--CHHHHHHHHHHHHh-----------hCC
Confidence 888999987765 221 11111 122222 23 36889999974210 01000000000000 023
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCC
Q 015784 368 LPAETVLRMATINGAKSVLWDND 390 (400)
Q Consensus 368 l~~~~al~~~T~~~A~~lg~~~~ 390 (400)
++. +.+..+.|+.+++|++.+
T Consensus 231 ~~~--v~~~~~~Na~rlf~~~~~ 251 (261)
T 3guw_A 231 REE--MEKVARENARKFLRVLEA 251 (261)
T ss_dssp TGG--GGHHHHSSHHHHTTC---
T ss_pred hhH--HHHHHHHHHHHHHCCCch
Confidence 554 677788899999998764
|
| >2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0003 Score=62.87 Aligned_cols=144 Identities=6% Similarity=-0.035 Sum_probs=76.9
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHh----hhcCCCCC-----h-------H-HHHhHhCCCCCCeeeEE
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM----DTRKVDHG-----T-------V-TFLDKIEFLQNNLLSAH 281 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~----~~~~~~~~-----~-------~-~~l~~~~~~~~~~~~~h 281 (400)
....+.+..+++.|.++|++|.+|+........... ...+.... . + ..+.++ .+.+.++.|
T Consensus 141 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~--P~l~~v~~H 218 (327)
T 2dvt_A 141 YYDLPQYRPFWGEVEKLDVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEH--PRLNIILGH 218 (327)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEEECCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHHHC--TTCCEEESG
T ss_pred CCCCcchHHHHHHHHHcCCeEEECCCCCCcchhhhhccchhhhcccccccHHHHHHHHHHHHcCcHhhC--CCCeEEEec
Confidence 445567899999999999999999864432100000 00000000 0 0 233333 234678889
Q ss_pred ecCCChhHHHHHH----------------------hcCCeEEECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC
Q 015784 282 TVWVNHTEIGLLS----------------------RAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN 337 (400)
Q Consensus 282 ~~~~~~~~i~~~~----------------------~~~~~~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~ 337 (400)
+...-+..+.++. +.|+.+.+.... ....++.+++. | -++.+|||+|..
T Consensus 219 ~gg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~y~~~sg~~-----~~~~~~~~~~~~g~dril~gSD~P~~-- 291 (327)
T 2dvt_A 219 MGEGLPYMMWRIDHRNAWVKLPPRYPAKRRFMDYFNENFHITTSGNF-----RTQTLIDAILEIGADRILFSTDWPFE-- 291 (327)
T ss_dssp GGTTHHHHHHHHHHTTTTCCSCCSSSCSSCHHHHHHHHEEEECTTCC-----CHHHHHHHHTTTCGGGEECCCCTTTS--
T ss_pred ccccHHHHHHHHHhhhhhccccccCCCCCCHHHHHhhcEEEeccCCC-----CHHHHHHHHHHhCcccEEEecCCCCc--
Confidence 8642122221111 123333332111 11234555554 4 489999999743
Q ss_pred CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
++-..+.... ..+++.++.-+....|+++++|++
T Consensus 292 --~~~~~~~~~~---------------~~~l~~~~~~~i~~~Na~rl~~l~ 325 (327)
T 2dvt_A 292 --NIDHASDWFN---------------ATSIAEADRVKIGRTNARRLFKLD 325 (327)
T ss_dssp --CHHHHHHHHH---------------HSSSCHHHHHHHHTHHHHHHTTCC
T ss_pred --cHHHHHHHHH---------------HCCCCHHHHHHHHHHhHHHHhCCC
Confidence 1222222211 114899999999999999999984
|
| >3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A | Back alignment and structure |
|---|
Probab=97.87 E-value=0.0014 Score=57.34 Aligned_cols=219 Identities=13% Similarity=0.075 Sum_probs=113.6
Q ss_pred HHHHhcCcceeeccCc-------CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCC
Q 015784 132 IELIHSGVTCFAEAGG-------QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA 204 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~-------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (400)
..+-+.||......+. ...+.+.+.++..+-+.... ..+ ++. ......++..+ ++ ..+
T Consensus 54 ~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~-~~v------~p~----~~~~a~~eL~~-~~---~~g 118 (291)
T 3irs_A 54 EEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPV-GSI------EAA----TRKEAMAQMQE-IL---DLG 118 (291)
T ss_dssp HHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEE-EEC------CCS----SHHHHHHHHHH-HH---HTT
T ss_pred HHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCcEEEE-Eec------Ccc----CHHHHHHHHHH-HH---hCC
Confidence 4567789988776542 34556667777665443221 111 111 11233344444 32 222
Q ss_pred CCCeEEEeecc-ccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEec
Q 015784 205 DGRIRIWFGIR-QIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV 283 (400)
Q Consensus 205 ~~~~~~~~~~~-~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~ 283 (400)
--.++...... .....+.+.+..+++.|.+.|++|.+|+........ .+.......+.+.++ .+.+.++.|+.
T Consensus 119 ~~Gi~~~~~~~~~~~~~~d~~~~~~~~~a~e~glpv~iH~~~~~~~~~----~~~~p~~~~~v~~~~--P~l~ivl~H~G 192 (291)
T 3irs_A 119 IRIVNLEPGVWATPMHVDDRRLYPLYAFCEDNGIPVIMMTGGNAGPDI----TYTNPEHIDRVLGDF--PDLTVVSSHGN 192 (291)
T ss_dssp CCCEEECGGGSSSCCCTTCGGGHHHHHHHHHTTCCEEEECSSSCSSSG----GGGCHHHHHHHHHHC--TTCCEEEEGGG
T ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHcCCeEEEeCCCCCCCCC----ccCCHHHHHHHHHHC--CCCEEEeecCC
Confidence 22344322221 123345567899999999999999999976421000 000000022444443 33467889988
Q ss_pred CCChhHHHHHH-h-cCCeEEECcccccc-ccCcccHHHHHH-cC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccc
Q 015784 284 WVNHTEIGLLS-R-AGVKVSHCPASAMR-MLGFAPIKEMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVF 358 (400)
Q Consensus 284 ~~~~~~i~~~~-~-~~~~~~~~p~~~~~-~~~~~~~~~~~~-~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (400)
....+++..+. + .|+.+... .... ......+.++++ .| =++.+|||+|... +...+... .
T Consensus 193 ~~~~~~~~~l~~~~~nvy~~~S--g~~~~~~~~~~~~~~~~~~g~drllfgSD~P~~~----~~~~~~~~---~------ 257 (291)
T 3irs_A 193 WPWVQEIIHVAFRRPNLYLSPD--MYLYNLPGHADFIQAANSFLADRMLFGTAYPMCP----LKEYTEWF---L------ 257 (291)
T ss_dssp TTCHHHHHHHHHHCTTEEEECG--GGGSSSTTHHHHHHHHTTGGGGTBCCCCCBTSSC----HHHHHHHH---H------
T ss_pred cccHHHHHHHHhHCCCeEecHH--HHhccCCCHHHHHHHHHHhCcceEEEecCCCCCC----HHHHHHHH---H------
Confidence 65434433332 2 35554322 1111 111123444443 34 3788999997542 32222221 1
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 359 ANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 359 ~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
..+++.++.-+....|+++++++..+-|
T Consensus 258 ------~l~l~~e~~~~i~~~NA~rl~~~~~~~~ 285 (291)
T 3irs_A 258 ------TLPIKPDAMEKILHGNAERLLAQAGREG 285 (291)
T ss_dssp ------TSSCCHHHHHHHHTHHHHHHHHHSCC--
T ss_pred ------HCCCCHHHHHHHHHHHHHHHhCcccccc
Confidence 1258999999999999999999987655
|
| >3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0034 Score=54.34 Aligned_cols=134 Identities=10% Similarity=-0.010 Sum_probs=78.5
Q ss_pred CHHHHHHHHHHHHHc-CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh-hHHHHHHh-cC
Q 015784 221 TDRLLLETRDMAREF-KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-TEIGLLSR-AG 297 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~-~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-~~i~~~~~-~~ 297 (400)
..+.+..+++.|.++ |++|.+|+...... .... ...+.+.+.. +.+.++.|+..... +.++.+++ .|
T Consensus 128 ~~~~~~~~~~~a~~~~~lpv~iH~~~~~~~-~~~~-------~~~~~l~~~p--~l~iv~~H~G~~~~~~~~~~~~~~~~ 197 (272)
T 3cjp_A 128 QIKSLKPIFKYSMDSGSLPIWIHAFNPLVL-QDIK-------EIAELCKAFP--KVPVILGHMGGSNWMTAVELAKEIQN 197 (272)
T ss_dssp CGGGGHHHHHHHHHTTCCCEEECCSTTCCH-HHHH-------HHHHHHHHST--TSCEEEGGGGGGGHHHHHHHHHHCTT
T ss_pred ccHHHHHHHHHHHhccCCcEEEeCCCCCcc-ccHH-------HHHHHHHHCC--CceEEEECCCCccHHHHHHHHHhCCC
Confidence 445789999999999 99999999743110 0000 0234455543 23566777765432 23333443 46
Q ss_pred CeEEECccccccccCcccHHHHHH-cCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 015784 298 VKVSHCPASAMRMLGFAPIKEMLH-ADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (400)
Q Consensus 298 ~~~~~~p~~~~~~~~~~~~~~~~~-~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~ 376 (400)
+.+.+...... ..++.+++ .+=++.+|||+|... +......... .+++.++.-+.
T Consensus 198 ~y~~~s~~~~~-----~~~~~~~~~~~dril~gSD~P~~~----~~~~~~~~~~---------------~~l~~~~~~~i 253 (272)
T 3cjp_A 198 LYLDTSAYFST-----FVLKIVINELPLKCIFGTDMPFGD----LQLSIEAIKK---------------MSNDSYVANAV 253 (272)
T ss_dssp EEEECTTCSCH-----HHHHHHHHHSTTTEECCCCTTSSC----HHHHHHHHHH---------------HCSSHHHHHHH
T ss_pred EEEEecccccH-----HHHHHHHHhCCCeEEEeCCCCCCC----hHHHHHHHHh---------------cCCCHHHHHHH
Confidence 66655432211 12344443 356899999997541 2222221111 13899999999
Q ss_pred HhHHHHHHcCCC
Q 015784 377 ATINGAKSVLWD 388 (400)
Q Consensus 377 ~T~~~A~~lg~~ 388 (400)
...|+++++|++
T Consensus 254 ~~~Na~rl~~l~ 265 (272)
T 3cjp_A 254 LGDNISRLLNIE 265 (272)
T ss_dssp HTHHHHHHHTC-
T ss_pred HHHHHHHHhCcc
Confidence 999999999986
|
| >4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A | Back alignment and structure |
|---|
Probab=97.72 E-value=0.0018 Score=57.03 Aligned_cols=141 Identities=12% Similarity=-0.048 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCCh--------------
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNH-------------- 287 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~-------------- 287 (400)
.+.+...++.+.++|+++.+|+..... .. ..+.+..+ .+.+.++.|+.....
T Consensus 121 ~~~~~~~~~~~~~~glpv~ih~~~~~l--~~----------l~~ll~~~--P~l~iVi~H~G~p~~~~~~~~~~~~~~w~ 186 (303)
T 4do7_A 121 DADFARGVAWLQANDYVYDVLVFERQL--PD----------VQAFCARH--DAHWLVLDHAGKPALAEFDRDDTALARWR 186 (303)
T ss_dssp CHHHHHHHHHHHHTTCEEEECCCGGGH--HH----------HHHHHHHC--CSSCEEEGGGGCCCGGGCC---CHHHHHH
T ss_pred CHHHHHHHHHHHHCCCeEEEecCHHHH--HH----------HHHHHHHC--CCCCEEEeCCCCCCccccccccchHHHHH
Confidence 346788899999999999999875421 10 22344443 234788999988642
Q ss_pred hHHHHHHhc-CCeEEECccccccc----------cCcc-cHHHHHHc-C-CcEEEcCCCCCCCCCCCHHHHHHHHHH-Hh
Q 015784 288 TEIGLLSRA-GVKVSHCPASAMRM----------LGFA-PIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASL-IN 352 (400)
Q Consensus 288 ~~i~~~~~~-~~~~~~~p~~~~~~----------~~~~-~~~~~~~~-G-v~v~~gtD~~~~~~~~~~~~~~~~~~~-~~ 352 (400)
+.+..+++. ++.+.+.-...... .... -++.+++. | =++.+|||+|......++-..+..... +.
T Consensus 187 ~~l~~la~~~nv~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD~P~~~~~~~~~~~~~~~~~~~~ 266 (303)
T 4do7_A 187 AALRELAALPHVVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAASYDEVASLVERWAE 266 (303)
T ss_dssp HHHHHHHTSTTEEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCCBTGGGGTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCCCCCCcCcCCHHHHHHHHHHHHh
Confidence 235555554 55555431111000 0001 13444443 5 489999999854222222222222111 10
Q ss_pred cccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 353 KGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 353 ~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
.+++.++.=+..-.|+++++|++.
T Consensus 267 -------------~~l~~~~~~~i~~~Na~rl~~l~~ 290 (303)
T 4do7_A 267 -------------SRLSAAERSALWGGTAARCYALPE 290 (303)
T ss_dssp -------------HHCCHHHHHHHTTHHHHHHTTCC-
T ss_pred -------------cCCCHHHHHHHHHHHHHHHhCCCC
Confidence 127899999999999999999974
|
| >2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.0016 Score=57.40 Aligned_cols=145 Identities=10% Similarity=-0.011 Sum_probs=76.8
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcC---------CCCC-----hHHHHhHhCCCCCCeeeEEecCC
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK---------VDHG-----TVTFLDKIEFLQNNLLSAHTVWV 285 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~---------~~~~-----~~~~l~~~~~~~~~~~~~h~~~~ 285 (400)
...+.+..+++.|.++|++|.+|+.............+. .... ..+.+.++ .+.+.++.|+...
T Consensus 132 ~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--P~l~~v~~H~gg~ 209 (307)
T 2f6k_A 132 FGSPVLERVYQELDARQAIVALHPNEPAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFEKY--PNIKVIIPHAGAF 209 (307)
T ss_dssp TTCGGGHHHHHHHHTTTCEEEEECCCCSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHHHC--TTCEEEESGGGTT
T ss_pred CCcHhHHHHHHHHHHcCCeEEECCCCCccccccccccccchhccchHHHHHHHHHHHhcCccccC--CCCeEEccCCCcc
Confidence 344678999999999999999999764421000000000 0000 00233333 2335778898642
Q ss_pred Ch---------------hHHHHHHhcCCeEEECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCCCCCHHHHHHHH
Q 015784 286 NH---------------TEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLA 348 (400)
Q Consensus 286 ~~---------------~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~~~~~~~~~~~~ 348 (400)
-+ +.+....+ |+.+.++.... ...++.+++. | =++.+|||+|... ........
T Consensus 210 ~p~~~~~~~~~~~~~~~~~~~~~~~-n~y~~~s~~~~-----~~~l~~~~~~~g~drll~gSD~P~~~----~~~~~~~~ 279 (307)
T 2f6k_A 210 LGIVDDRIAQYAQKVYQVDVYDVMH-HVYFDVAGAVL-----PRQLPTLMSLAQPEHLLYGSDIPYTP----LDGSRQLG 279 (307)
T ss_dssp HHHHHHHHHHHHHHHHCCCHHHHHH-HSEEECCSSCT-----TTHHHHHTTTSCGGGEECCCCTTTSC----HHHHHHHH
T ss_pred chhhHHHHHhhccccCcccHHHHHh-heEEeccCCCC-----HHHHHHHHHhcCcccEEEecCCCCCC----chhHHHHH
Confidence 11 12222223 56655443211 1235555554 4 3899999998542 21111111
Q ss_pred HHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 349 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
..+.. ..+++.++.-+....|+++++|+
T Consensus 280 ~~l~~-----------~~~l~~~~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 280 HALAT-----------TDLLTNEQKQAIFYDNAHRLLTE 307 (307)
T ss_dssp HHHHH-----------CTTSCHHHHHHHHTHHHHHHHHC
T ss_pred HHHhh-----------ccCCCHHHHHHHHHHHHHHHhCc
Confidence 11111 12489999999999999998864
|
| >3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.023 Score=51.37 Aligned_cols=93 Identities=13% Similarity=0.127 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHc----CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCC-------------------------CC
Q 015784 224 LLLETRDMAREF----KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEF-------------------------LQ 274 (400)
Q Consensus 224 ~l~~~~~~a~~~----~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-------------------------~~ 274 (400)
.++..+++|.+. ++||.+|+-+...+ .+++|..... ..
T Consensus 180 ~F~~QL~LA~e~~~~~~lPv~IH~R~A~~d-------------~l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (401)
T 3e2v_A 180 FFEEQLKISCLNDKLSSYPLFLHMRSACDD-------------FVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHP 246 (401)
T ss_dssp HHHHHHHHTTSSHHHHTSCEEEEEESCHHH-------------HHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCT
T ss_pred HHHHHHHHHHhhhccCCCeEEEEecchHHH-------------HHHHHHHhhccccccccccccccccccccccccccCC
Confidence 467777889999 99999999776543 2333333211 01
Q ss_pred CCeeeEEecCCChhHHHHHHhcC--CeEEECccccccccCcccHHHHHHc-C-CcEEEcCCCC
Q 015784 275 NNLLSAHTVWVNHTEIGLLSRAG--VKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGA 333 (400)
Q Consensus 275 ~~~~~~h~~~~~~~~i~~~~~~~--~~~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~ 333 (400)
....+.|+..=+.++++++.+.| ..+++...+ ++- ...+ ++++. . =++.+=||.|
T Consensus 247 ~~~~V~H~FsGs~e~a~~~l~lG~~~yis~~g~~-~k~--~~~~-e~v~~iPldrLLlETDaP 305 (401)
T 3e2v_A 247 DRKLVVHSFTGSAIDLQKLLNLSPNIFIGVNGCS-LRT--EENL-AVVKQIPTERLLLETDAP 305 (401)
T ss_dssp TCCEEECSCCCCHHHHHHHHHHCTTEEEEECGGG-GSS--HHHH-HHHHTSCGGGEEECCCTT
T ss_pred CCcEEEEcCCCCHHHHHHHHhCCCCEEEEeCCEe-cCC--HHHH-HHHHhCCchhEEEecCCC
Confidence 13467899998999999999998 888887642 221 1111 22221 1 1477888887
|
| >3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A | Back alignment and structure |
|---|
Probab=96.15 E-value=0.28 Score=41.79 Aligned_cols=84 Identities=13% Similarity=0.086 Sum_probs=47.3
Q ss_pred hhHHHHHHhcCCeEEECccccccccC---cccHHHHHHcCCcEEEcCCCC-CCCCCCCHHHHHHHHHHHhcccccccCCC
Q 015784 287 HTEIGLLSRAGVKVSHCPASAMRMLG---FAPIKEMLHADICVSLGTDGA-PSNNRMSIVDEMYLASLINKGREVFANGT 362 (400)
Q Consensus 287 ~~~i~~~~~~~~~~~~~p~~~~~~~~---~~~~~~~~~~Gv~v~~gtD~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (400)
++.++.+++.|+.+.+.-.+.....+ ....+.+++.|+.+.+|||.- +......+-..+......
T Consensus 147 ~~~l~~l~~~G~~iEiN~~s~~g~~g~~~~~~~~~~~~~gl~~~igSDaH~~~~r~~~~~~a~~~l~~~----------- 215 (262)
T 3qy7_A 147 PSLLYHLVEKGAASQITSGSLAGIFGKQLKAFSLRLVEANLIHFVASDAHNVKTRNFHTQEALYVLEKE----------- 215 (262)
T ss_dssp THHHHHHHHTTCEEEEEHHHHHTTTCHHHHHHHHHHHHTTCCCEEECCBCSSSSSCCCHHHHHHHHHHH-----------
T ss_pred HHHHHHHHHCCCEEEEECCccCcccchHHHHHHHHHHhCCCeEEEEccCCCCCCCCchHHHHHHHHHHH-----------
Confidence 35678888999765443222211111 224677888999999999954 332234444433333210
Q ss_pred CCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 363 TDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 363 ~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
+....+-+ ...||..++.-
T Consensus 216 -----~G~~~a~~-~~~n~~~il~~ 234 (262)
T 3qy7_A 216 -----FGSELPYM-LTENAELLLRN 234 (262)
T ss_dssp -----HCSHHHHH-HHHHHHHHHTT
T ss_pred -----hCHHHHHH-HHHHHHHHHCC
Confidence 12334444 67899988853
|
| >2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A | Back alignment and structure |
|---|
Probab=96.14 E-value=0.47 Score=40.00 Aligned_cols=85 Identities=14% Similarity=0.122 Sum_probs=46.9
Q ss_pred hhHHHHHHhcCCeEEECcccc--ccccC------cccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccc
Q 015784 287 HTEIGLLSRAGVKVSHCPASA--MRMLG------FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVF 358 (400)
Q Consensus 287 ~~~i~~~~~~~~~~~~~p~~~--~~~~~------~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (400)
++.++.+++.|+.+.+.-.+. ....+ ..-.+.+.+.|+.+.+|||.-....-...+.+........
T Consensus 151 ~~~l~~l~~~G~~lEiN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~~GSDaH~~~~~~~~~~~a~~~l~~~------ 224 (247)
T 2wje_A 151 EKRVRELIDMGCYTQVNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHVIASDMHNLDGRPPHMAEAYDLVTQK------ 224 (247)
T ss_dssp HHHHHHHHHTTCEEEEEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSEEECCBCCSSSSCCCHHHHHHHHHHH------
T ss_pred HHHHHHHHHCCCEEEEecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEEEEeCCCCCcccChhHHHHHHHHHHH------
Confidence 567888889998865543222 11122 1124555789999999999643312112233333222111
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 359 ANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 359 ~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
+....+-.+...||.+++.
T Consensus 225 ---------~G~~~~~~l~~~n~~~i~~ 243 (247)
T 2wje_A 225 ---------YGEAKAQELFIDNPRKIVM 243 (247)
T ss_dssp ---------HCHHHHHHHHTHHHHHHHT
T ss_pred ---------hCHHHHHHHHHHHHHHHHc
Confidence 2355555556679988874
|
| >2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.32 Score=43.17 Aligned_cols=143 Identities=13% Similarity=0.070 Sum_probs=75.2
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh-----hcCC----CCC-----hHHHHhHhCCCCCCeeeEEecCC
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD-----TRKV----DHG-----TVTFLDKIEFLQNNLLSAHTVWV 285 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~-----~~~~----~~~-----~~~~l~~~~~~~~~~~~~h~~~~ 285 (400)
.+.+.+..+.+.|.++|++|.+|+........ ... ..+. ... ....+.++ .+.+.++.|+...
T Consensus 152 l~d~~~~~~~~~~~e~~lpv~iH~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~--P~l~~v~~H~Gg~ 228 (336)
T 2wm1_A 152 LNAQELFPVYAAAERLKCSLFVHPWDMQMDGR-MAKYWLPWLVGMPAETTIAICSMIMGGVFEKF--PKLKVCFAHGGGA 228 (336)
T ss_dssp TTCGGGHHHHHHHHHHTCEEEEECCSCCCSGG-GSSTTHHHHTHHHHHHHHHHHHHHHTTHHHHC--TTCCEEESGGGTT
T ss_pred CCCccHHHHHHHHHHcCCEEEECCCCCCcccc-ccccchHHHhccHHHHHHHHHHHHHcCchhhC--CCCeEehhcccch
Confidence 44557899999999999999999975422100 000 0000 000 01233332 2346888998642
Q ss_pred ChhHHHHH----------H-h----------cCCeEEECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCCCCCHH
Q 015784 286 NHTEIGLL----------S-R----------AGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIV 342 (400)
Q Consensus 286 ~~~~i~~~----------~-~----------~~~~~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~~~~~~ 342 (400)
-+..+.++ . . .++.+...+ .....++.+++. | =++.+|||+|.......+.
T Consensus 229 ~p~~~~r~~~~~~~~~~~~~~~l~~~p~~~~~~~~~ds~~------~~~~~l~~~i~~~g~drilfGSD~P~~~~~~~~~ 302 (336)
T 2wm1_A 229 FPFTVGRISHGFSMRPDLCAQDNPMNPKKYLGSFYTDALV------HDPLSLKLLTDVIGKDKVILGTDYPFPLGELEPG 302 (336)
T ss_dssp HHHHHHHHHHHHHHCHHHHSSSCCSCGGGGTTSSEEECCC------CSHHHHHHHHHHHCTTSEECCCCBTSTTSCSSTT
T ss_pred HHHHHHHHHhhhhhChhhhhccCCCCHHHHHHhhEEEecc------cCHHHHHHHHHHhCCccEEEeCCCCCCcCCcCHH
Confidence 22222111 1 0 033332111 011234555443 5 4899999998532222221
Q ss_pred HHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 343 DEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
. . +.. -.+++.++.-+....|++++++++
T Consensus 303 ~---~---l~~-----------~~~l~~~~~~~i~~~NA~rl~~l~ 331 (336)
T 2wm1_A 303 K---L---IES-----------MEEFDEETKNKLKAGNALAFLGLE 331 (336)
T ss_dssp H---H---HHT-----------CTTSCHHHHHHHHTHHHHHHHTCC
T ss_pred H---H---HHh-----------ccCCCHHHHHHHHHHHHHHHhCcC
Confidence 1 1 110 124899999999999999999985
|
| >1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A* | Back alignment and structure |
|---|
Probab=93.36 E-value=0.15 Score=41.95 Aligned_cols=87 Identities=8% Similarity=-0.024 Sum_probs=57.6
Q ss_pred ChhHHHHHHhcCCeEEECccccccc-cC-----cc----cHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhccc
Q 015784 286 NHTEIGLLSRAGVKVSHCPASAMRM-LG-----FA----PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (400)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~p~~~~~~-~~-----~~----~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (400)
+.+.++.++++|+.+.++-.+..+. .+ .. -++...+.|+++.++||.-.+..-.++.........
T Consensus 113 ~~~~a~~A~e~gv~lEIn~s~~~~~~~~~R~~~~~~~~~il~l~k~~g~~ivisSDAh~~~~v~~~~~~~~l~~~----- 187 (212)
T 1v77_A 113 DHVLAKLMVKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSAQEKWDVRYPRDLISLGVV----- 187 (212)
T ss_dssp CHHHHHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSSGGGCCCHHHHHHHHHH-----
T ss_pred CHHHHHHHHHCCeEEEEECcHHhcCCcchHHHHHHHHHHHHHHHHhcCCCEEEeCCCCChhhcCCHHHHHHHHHH-----
Confidence 4567888899999988775443221 11 12 234455679999999997644233444444444432
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
.|++.++++.+.|.+|-+++..
T Consensus 188 ----------~G~~~e~~~~~l~~~~~~i~~~ 209 (212)
T 1v77_A 188 ----------IGMEIPQAKASISMYPEIILKR 209 (212)
T ss_dssp ----------TTCCHHHHHHTTTHHHHHHHC-
T ss_pred ----------cCCCHHHHHHHHHHHHHHHHHh
Confidence 3599999999999999998853
|
| >3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=93.36 E-value=1.2 Score=39.91 Aligned_cols=148 Identities=12% Similarity=0.060 Sum_probs=75.8
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhh-hHHh------------hhcCCC------CChH-----HHHhHhCCCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYEN-QVVM------------DTRKVD------HGTV-----TFLDKIEFLQ 274 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~-~~~~------------~~~~~~------~~~~-----~~l~~~~~~~ 274 (400)
..+...+..+.+.|.+.|++|.+|........ .... ...+.+ ...+ ..+.+ ..+
T Consensus 169 ~~~d~~~~p~~~~~~e~g~pV~iH~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~t~~~~~~li~~gv~~r--fP~ 246 (357)
T 3nur_A 169 FLDQDKYDIIFKTAENLDVPIYLHPAPVNSDIYQSYYKGNYPEVTAATFACFGYGWHIDVGIHAIHLVLSGIFDR--YPK 246 (357)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEEECCCCCHHHHHHHTCCSSCHHHHHHHHTTTTHHHHHHHHHHHHHHHTTHHHH--STT
T ss_pred CCCCccHHHHHHHHHhcCCeEEEecCCCCccccccccccCcccchhhhhhhhhhchhHHHHHHHHHHHHcCchhh--CCC
Confidence 34555788999999999999999997653211 0000 000000 0000 01122 234
Q ss_pred CCeeeEEecCCChhHHHHHHhcCC--eEEECcc-----ccccc--cCc---ccHHHHH-HcC-CcEEEcCCCCCCCCCCC
Q 015784 275 NNLLSAHTVWVNHTEIGLLSRAGV--KVSHCPA-----SAMRM--LGF---APIKEML-HAD-ICVSLGTDGAPSNNRMS 340 (400)
Q Consensus 275 ~~~~~~h~~~~~~~~i~~~~~~~~--~~~~~p~-----~~~~~--~~~---~~~~~~~-~~G-v~v~~gtD~~~~~~~~~ 340 (400)
-+.++.|+...-+-.++++...-. .. -.|. .++++ .+. ..++.++ ..| =++.+|||+|.... ..
T Consensus 247 LkiilaH~Gg~~P~~~~rld~~~~~~~l-~~~ps~~~~~nvy~~~sg~~~~~~l~~~~~~~g~drilfgSD~P~~~~-~~ 324 (357)
T 3nur_A 247 LNMIIGHWGEFIPFFLERMDEALFAEHL-NHSVSYYFKNSFYITPSGMLTKPQFDLVKKEVGIDRILYAADYPYIEP-EK 324 (357)
T ss_dssp CCEEECGGGTTGGGGHHHHHHHSCCTTS-SSCHHHHHHHSEEECCTTCCCHHHHHHHHHHHCGGGBCBCCCTTTCCC-TT
T ss_pred CeEEEecccccHHHHHHHHHhhhccccc-cCCHHHHHHhceeeecccCCCHHHHHHHHHHcCCceEEEeCCCCCCCc-hH
Confidence 478889987433444444322100 00 0010 11111 111 1233333 235 37899999985421 11
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
. . ..+ ...+++.++.-+....|+++++|++
T Consensus 325 ~---~---~~~------------~~~~l~~~~~~~i~~~NA~rl~~l~ 354 (357)
T 3nur_A 325 L---G---VFL------------DELGLTDEEKEKISYTNGAKLLGLS 354 (357)
T ss_dssp H---H---HHT------------TSSCCCHHHHHHHHTHHHHHHHTC-
T ss_pred H---H---HHH------------HHcCCCHHHHHHHHhHHHHHHhCCC
Confidence 1 1 111 1235899999999999999999986
|
| >2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A | Back alignment and structure |
|---|
Probab=93.23 E-value=1.8 Score=38.26 Aligned_cols=28 Identities=14% Similarity=0.050 Sum_probs=23.9
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCC
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~ 246 (400)
..+.+.+..+.+.|.++|++|.+|+...
T Consensus 154 ~l~d~~~~p~~~~~~e~~lpv~iH~~~~ 181 (334)
T 2hbv_A 154 DLDDATLEAFLTHCANEDIPILVHPWDM 181 (334)
T ss_dssp CTTSHHHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCCcHHHHHHHHHHHHCCCEEEECCCCC
Confidence 4456789999999999999999999754
|
| >2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=91.49 E-value=2.2 Score=37.52 Aligned_cols=93 Identities=10% Similarity=-0.001 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEec---------CCChhHHHHHH
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLLS 294 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~---------~~~~~~i~~~~ 294 (400)
.=+++++.+.+.|+.+.+-...... ..+.++. ...+.++.|.. .+++++++.++
T Consensus 140 ~G~~vV~emnrlGmivDlSH~s~~~--------------~~dvl~~---s~~Pvi~SHsn~~al~~h~RNl~De~irala 202 (325)
T 2i5g_A 140 FGREIVAEMNRVGIMCDLSHVGSKT--------------SEEVILE---SKKPVCYSHCLPSGLKEHPRNKSDEELKFIA 202 (325)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHHH--------------HHHHHHH---CSSCCEEEEECBTTTCCCTTSBCHHHHHHHH
T ss_pred HHHHHHHHHHHcCcEEEcCcCCHHH--------------HHHHHHH---hCCCEEEeCCCccccCCCCCCCCHHHHHHHH
Confidence 3466777778888887554322221 1112222 22456677755 34688999999
Q ss_pred hcCCeEEECccccccc-cCcccHHHHHH--------cCC-cEEEcCCCC
Q 015784 295 RAGVKVSHCPASAMRM-LGFAPIKEMLH--------ADI-CVSLGTDGA 333 (400)
Q Consensus 295 ~~~~~~~~~p~~~~~~-~~~~~~~~~~~--------~Gv-~v~~gtD~~ 333 (400)
++|-.+-++-.+.+-. .....+..+.+ .|+ .|++|||.+
T Consensus 203 ~~GGvigv~~~~~fl~~~~~~t~~~~~~hi~~i~~~~G~dhVgiGsDf~ 251 (325)
T 2i5g_A 203 DHGGFVGVTMFAPFLKKGIDSTIDDYAEAIEYVMNIVGEDAIGIGTDFT 251 (325)
T ss_dssp HTTCEEEECCCGGGSSSGGGCBHHHHHHHHHHHHHHHCTTSEEECCCBC
T ss_pred HcCCeEEEeecchhcCCCCCCCHHHHHHHHHHHHHhcCCceEEECCcCc
Confidence 9988776654433321 11222222222 364 799999983
|
| >2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei} | Back alignment and structure |
|---|
Probab=91.03 E-value=2.6 Score=37.92 Aligned_cols=148 Identities=9% Similarity=0.009 Sum_probs=72.8
Q ss_pred HHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHh--cCCeEEECc
Q 015784 227 ETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR--AGVKVSHCP 304 (400)
Q Consensus 227 ~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~--~~~~~~~~p 304 (400)
.+++.|.++|++|.+|.......... ...........+......+.+.++.| ......++..+.+ .++.+.+.-
T Consensus 213 ~~~e~a~e~glpv~iH~g~~d~~~~~---~~~~p~~l~~ll~~~~~P~lkiVl~H-g~~~~~~~~~l~~~~~nvy~d~s~ 288 (376)
T 2qpx_A 213 HVAPFIIAQDMPLQFHVGYGDADTDM---YLGNPLLMRDYLKAFTKKGLKVVLLH-CYPYHREAGYLASVFPNLYFDISL 288 (376)
T ss_dssp HHHHHHHHHTCCEEEEESCCCTTSCG---GGCCGGGGHHHHHHHGGGTCCEEEEE-CTTCHHHHHHHHHHSTTEEEECTT
T ss_pred HHHHHHHHCCCeEEEEeCCCCCCCCc---cccCHHHHHHHHhcCCCCCCcEEEEC-CCccHHHHHHHHHhCCCEEEeccc
Confidence 44489999999999999753211000 00000012244552223344688999 4434444655655 466555442
Q ss_pred cccccc-cC-cccHHHHHHc-C-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH-----HHH
Q 015784 305 ASAMRM-LG-FAPIKEMLHA-D-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAET-----VLR 375 (400)
Q Consensus 305 ~~~~~~-~~-~~~~~~~~~~-G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----al~ 375 (400)
..+.. .+ ...++.+++. | =++.+|||++.... ............+.... ...+++.++ .-+
T Consensus 289 -~~~~~~~~~~~~l~~l~~~~g~dRiLfGSD~P~~~e-~~~~~~~~~~~~l~~l~--------~~~~ls~~~~~~~~~~~ 358 (376)
T 2qpx_A 289 -LDNLGPSGASRVFNEAVELAPYTRILFASDASTYPE-MYGLAARQFKQALVAHF--------NQLPFVDLAQKKAWINA 358 (376)
T ss_dssp -HHHHSGGGHHHHHHHHTSSSCGGGEECCCCCCBSHH-HHHHHHHHHHHHHHHHH--------HTCSSCCHHHHHHHHHH
T ss_pred -ccccChhhHHHHHHHHHHhcCCCCEEEECCCCccch-hhcccHHHHHHHHHHHH--------cccCcchhhcCHHHHHH
Confidence 11110 01 1234555554 3 47889999985310 00011100001111000 001355555 777
Q ss_pred HHhHHHHHHcCCC
Q 015784 376 MATINGAKSVLWD 388 (400)
Q Consensus 376 ~~T~~~A~~lg~~ 388 (400)
....|+++++|++
T Consensus 359 I~~~NA~rlf~l~ 371 (376)
T 2qpx_A 359 ICWQTSAKLYHQE 371 (376)
T ss_dssp HHTHHHHHHTTCG
T ss_pred HHHHhHHHHhCCC
Confidence 8899999999985
|
| >3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus} | Back alignment and structure |
|---|
Probab=89.45 E-value=10 Score=33.02 Aligned_cols=146 Identities=11% Similarity=0.013 Sum_probs=75.1
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCchhh------hHHhhhcCCCCChH-----HHHhHhCCCCCCeeeEEecCCCh
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIPYEN------QVVMDTRKVDHGTV-----TFLDKIEFLQNNLLSAHTVWVNH 287 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~------~~~~~~~~~~~~~~-----~~l~~~~~~~~~~~~~h~~~~~~ 287 (400)
..+...+..+.+.|.+.|++|.+|........ ...... ..... ..+.+ ..+-+.++.|+...-+
T Consensus 138 ~l~d~~~~p~~~~~~e~g~pv~iH~g~~~~~p~~~~~~~~~~~~---~~~~~~li~~gv~~r--fP~Lkii~~H~Gg~~P 212 (312)
T 3ij6_A 138 SIADKEFRPVLAQAAKLHVPLWMHPVFDARKPDNNLVFSWEYEL---SQAMLQLVQSDLFQD--YPNLKILVHHAGAMVP 212 (312)
T ss_dssp ETTSTTTHHHHHHHHHTTCCEEEECCCCTTSSSCCTTTHHHHHH---HHHHHHHHHTTHHHH--CTTCCEEESGGGTTTT
T ss_pred CCCCccHHHHHHHHHHcCCeEEEcCCCCCCCCCcccccccHHHH---HHHHHHHHHcChHhh--CCCCeEEecCCcccHH
Confidence 34455788999999999999999986432100 000000 00000 11222 2344788999884323
Q ss_pred hHHHHHH----------hcCCeEEECccccccccCcccHHHHHH-cC-CcEEEcCCCCCCCCCCCHHHHHHHHHHHhccc
Q 015784 288 TEIGLLS----------RAGVKVSHCPASAMRMLGFAPIKEMLH-AD-ICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (400)
Q Consensus 288 ~~i~~~~----------~~~~~~~~~p~~~~~~~~~~~~~~~~~-~G-v~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (400)
..++++. -.++.+...-. .....++.+++ -| =++.+|||+|............... +.
T Consensus 213 ~~~~r~~~~~~~~~~~~~~nvy~dts~~-----~~~~~l~~~~~~~g~drilfgSD~P~~~~p~~~~~~~~~~--l~--- 282 (312)
T 3ij6_A 213 FFSGRIDHILDEKHAQDFKKFYVDTAIL-----GNTPALQLAIDYYGIDHVLFGTDAPFAVMPSGADQIITQA--IN--- 282 (312)
T ss_dssp TSHHHHHHHSCHHHHHHGGGCEEECCSS-----SCHHHHHHHHHHHCGGGEECCCCBTSSSTTTCSHHHHHHH--HH---
T ss_pred HHHHHHHHhcccchHHHcCeEEEeCCCC-----CCHHHHHHHHHhCCCCeEEEeCCCCCCcCCCcchHHHHHH--HH---
Confidence 2222221 12333322111 01122444443 35 3899999998542111111111111 11
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
..+++.++.-+....|+++++|..
T Consensus 283 ---------~l~l~~~~~~~i~~~NA~rl~~~~ 306 (312)
T 3ij6_A 283 ---------DLTISDKDKQKIFHDNYYSLIKEG 306 (312)
T ss_dssp ---------TSSSCHHHHHHHHTHHHHHHHCC-
T ss_pred ---------HcCCCHHHHHHHHHHHHHHHHhCc
Confidence 124899999999999999999854
|
| >4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A* | Back alignment and structure |
|---|
Probab=87.54 E-value=5.5 Score=35.75 Aligned_cols=29 Identities=14% Similarity=0.117 Sum_probs=24.0
Q ss_pred cCCHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 219 NATDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 219 ~~~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
..+...+..+.+.|.+.|++|.+|.....
T Consensus 187 ~l~d~~~~pi~~~~~e~g~pV~iH~g~~~ 215 (373)
T 4inf_A 187 YLDEEFFDPIFRALVEVDQPLYIHPATSP 215 (373)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEECCCCCC
T ss_pred CCCCcchHHHHHHHHHcCCeEEECCCCCC
Confidence 34555789999999999999999997654
|
| >1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A* | Back alignment and structure |
|---|
Probab=86.88 E-value=8.1 Score=34.48 Aligned_cols=132 Identities=11% Similarity=-0.005 Sum_probs=73.2
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEec---------CCChhHHHHHH
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV---------WVNHTEIGLLS 294 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~---------~~~~~~i~~~~ 294 (400)
.=+++++.+.+.|+.|.+-........ +.+... ..+.+++|.. .+++++++.++
T Consensus 179 ~G~~vV~emnrlGmivDlSH~s~~~~~--------------dvl~~s---~~PviaSHSn~ral~~h~RNl~De~l~~la 241 (369)
T 1itu_A 179 FGQRVVKELNRLGVLIDLAHVSVATMK--------------ATLQLS---RAPVIFSHSSAYSVCASRRNVPDDVLRLVK 241 (369)
T ss_dssp HHHHHHHHHHHHTCEEECTTBCHHHHH--------------HHHHHC---SSCCEESSCCBTTTSCCTTSBCHHHHHHHH
T ss_pred hHHHHHHHHHHcCCEEEcCCCCHHHHH--------------HHHHhc---CCCEEEeCCChhhcCCCCCCCCHHHHHHHH
Confidence 346777788889998855443322211 111211 2234445543 56789999999
Q ss_pred hcCCeEEECccccccc-cCcccHHHHHH--------cCC-cEEEcCCCCC---CCC---CCCHHHHHHHHHHHhcccccc
Q 015784 295 RAGVKVSHCPASAMRM-LGFAPIKEMLH--------ADI-CVSLGTDGAP---SNN---RMSIVDEMYLASLINKGREVF 358 (400)
Q Consensus 295 ~~~~~~~~~p~~~~~~-~~~~~~~~~~~--------~Gv-~v~~gtD~~~---~~~---~~~~~~~~~~~~~~~~~~~~~ 358 (400)
++|-.+-++-...+-. .....+..+.+ .|+ .|++|||.-. .+. ...-+..+...+ .
T Consensus 242 ~~GGvigv~~~~~fl~~~~~~t~~~~~~hi~hi~~~~G~dhVgiGsDfdG~~~~p~gl~d~~~~p~l~~~L--~------ 313 (369)
T 1itu_A 242 QTDSLVMVNFYNNYISCTNKANLSQVADHLDHIKEVAGARAVGFGGDFDGVPRVPEGLEDVSKYPDLIAEL--L------ 313 (369)
T ss_dssp HHTCEEEECCCHHHHTSSSCCBHHHHHHHHHHHHHHHCGGGEEECCCTTSCSCCCBTCSSTTCHHHHHHHH--H------
T ss_pred HcCCeEEEEechhhcCCCCCCCHHHHHHHHHHHHHhhCCCeEEECCCCCCCCCCCCCCCCHHHHHHHHHHH--H------
Confidence 9987766554332221 12223333322 365 5999999631 111 112222222221 1
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcC
Q 015784 359 ANGTTDPAALPAETVLRMATINGAKSVL 386 (400)
Q Consensus 359 ~~~~~~~~~l~~~~al~~~T~~~A~~lg 386 (400)
+.|+|.+++-+++-.|..+.+.
T Consensus 314 ------~~G~se~~i~ki~g~N~lRvl~ 335 (369)
T 1itu_A 314 ------RRNWTEAEVKGALADNLLRVFE 335 (369)
T ss_dssp ------HTTCCHHHHHHHHTHHHHHHHH
T ss_pred ------HcCCCHHHHHHHHhHhHHHHHH
Confidence 2358999999999999988774
|
| >2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15 | Back alignment and structure |
|---|
Probab=85.69 E-value=10 Score=33.51 Aligned_cols=147 Identities=12% Similarity=0.029 Sum_probs=74.3
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhh------hHHh-hhcCCCCCh-HHHHhHhCCCCCCeeeEEecCCChhHHH
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYEN------QVVM-DTRKVDHGT-VTFLDKIEFLQNNLLSAHTVWVNHTEIG 291 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~------~~~~-~~~~~~~~~-~~~l~~~~~~~~~~~~~h~~~~~~~~i~ 291 (400)
...+.+..+++.|.++|++|.+|........ .... .......-. ...+.++ .+.+.++.|+...-+..+.
T Consensus 156 l~d~~~~p~~~~a~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~~li~~~v~~~~--P~l~~vi~H~Gg~~p~~~~ 233 (350)
T 2gwg_A 156 LTDRIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFMQCVAGDLFKDF--PELKFVIPHGGGAVPYHWG 233 (350)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHHHHHHHHHSCHHHHC--TTCCEEESGGGTTTGGGHH
T ss_pred CCCHHHHHHHHHHHHcCCeEEECCCCCCcccccccccccchHHHHHHHHHHhcCccccC--CCCcEEeccCCCcchhhHH
Confidence 4556789999999999999999987543210 0000 000000000 0233333 2346788999743222211
Q ss_pred ---H----H--------HhcCCeEEECccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCCCC-----CHHHHHHHHH
Q 015784 292 ---L----L--------SRAGVKVSHCPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNNRM-----SIVDEMYLAS 349 (400)
Q Consensus 292 ---~----~--------~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~~~-----~~~~~~~~~~ 349 (400)
. + ...|+.+.++... ...++.+++. | =++.+|||+|...... ..+.......
T Consensus 234 r~~~~~~~~~~~~l~~~~~~n~y~d~s~~~------~~~l~~l~~~~g~dril~gSD~P~~~~~~~p~~~~~~~~~~~~l 307 (350)
T 2gwg_A 234 RFRGLAQEMKKPLLEDHVLNNIFFDTCVYH------QPGIDLLNTVIPVDNVLFASEMIGAVRGIDPRTGFYYDDTKRYI 307 (350)
T ss_dssp HHHHHHHHTTCCCHHHHTTTTEEEECCCCS------HHHHHHHHHHSCGGGEECCCCCSSSCCCEETTTTEETTCTHHHH
T ss_pred HHHHHHHhccCCCcHHHHhhcEEEEecccC------cHHHHHHHHHhCcccEEEecCCCCCcccCCcccccchhhHHHHH
Confidence 1 1 1134444333211 1234555543 5 4899999998431110 0111111111
Q ss_pred HHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 350 LINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
.. -.+++.++.-+....|+++++++
T Consensus 308 --~~-----------~~~l~~~~~~~i~~~NA~rl~~~ 332 (350)
T 2gwg_A 308 --EA-----------STILTPEEKQQIYEGNARRVYPR 332 (350)
T ss_dssp --HH-----------CSSSCHHHHHHHHTHHHHHHCHH
T ss_pred --Hh-----------ccCCCHHHHHHHHHHHHHHHHHh
Confidence 00 11489999999999999999976
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 400 | ||||
| d2uz9a2 | 313 | c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo | 6e-51 | |
| d1p1ma2 | 281 | c.1.9.9 (A:50-330) Hypothetical protein TM0936, pr | 6e-47 | |
| d2i9ua2 | 310 | c.1.9.9 (A:67-376) Guanine deaminase {Clostridium | 2e-44 | |
| d2paja2 | 336 | c.1.9.9 (A:70-405) Hypothetical protein GOS_194309 | 2e-40 | |
| d2ooda2 | 325 | c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobi | 5e-40 | |
| d2imra2 | 308 | c.1.9.16 (A:91-398) Hypothetical protein DR0824 {D | 3e-31 | |
| d1ra0a2 | 320 | c.1.9.5 (A:56-375) Cytosine deaminase catalytic do | 5e-24 | |
| d2p9ba2 | 324 | c.1.9.17 (A:71-394) Uncharacterized protein BL1453 | 2e-20 | |
| d2puza2 | 301 | c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobac | 3e-19 | |
| d2q09a2 | 301 | c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propa | 3e-18 | |
| d2bb0a2 | 300 | c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillu | 3e-15 | |
| d2qs8a2 | 310 | c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromon | 1e-12 | |
| d3be7a2 | 303 | c.1.9.18 (A:57-359) Zn-dependent arginine carboxyp | 2e-11 | |
| d2r8ca2 | 311 | c.1.9.18 (A:58-368) Uncharacterized protein EAJ561 | 2e-10 | |
| d1yrra2 | 297 | c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphat | 8e-08 | |
| d2p9ba1 | 118 | b.92.1.10 (A:9-70,A:395-450) Uncharacterized prote | 2e-07 | |
| d2bb0a1 | 113 | b.92.1.10 (A:3-73,A:374-415) Imidazolonepropionase | 4e-07 | |
| d2r8ca1 | 102 | b.92.1.9 (A:2-57,A:369-414) Uncharacterized protei | 5e-06 | |
| d1ynya1 | 127 | b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacill | 8e-06 | |
| d2vhla1 | 91 | b.92.1.5 (A:3-57,A:359-394) N-acetylglucosamine-6- | 1e-05 | |
| d1onwa1 | 105 | b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidas | 2e-05 | |
| d1yrra1 | 85 | b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6- | 3e-05 | |
| d2amxa1 | 357 | c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plas | 2e-04 | |
| d2puza1 | 103 | b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionas | 0.001 | |
| d1m7ja1 | 55 | b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolas | 0.001 |
| >d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]} Length = 313 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (433), Expect = 6e-51
Identities = 71/319 (22%), Positives = 139/319 (43%), Gaps = 11/319 (3%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGI-ELIHSG 138
PG V+TH+H SQ G + D+ L+ WL +P E D + + +G
Sbjct: 1 PGLVDTHIHASQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNG 60
Query: 139 VTCFAEAGGQH---VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE 195
T H +A + G RA + + MD + TT++ I+ +
Sbjct: 61 TTTACYFATIHTDSSLLLADITDKFGQRAFVGKVCMDLND--TFPEYKETTEESIKETER 118
Query: 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255
++ R++ R ++ ++ L+ E ++A+ I H++E E + V +
Sbjct: 119 FVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTRDLHIQSHISENRDEVEAVKN 178
Query: 256 TRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFA 314
+ DK L N + AH +++ E+ + G ++HCP S + + GF
Sbjct: 179 LYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGFL 238
Query: 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374
+ E+L ++ + LGTD A S++D + A +++ + + +L + V
Sbjct: 239 NVLEVLKHEVKIGLGTDVA-GGYSYSMLDAIRRAVMVSNILLI---NKVNEKSLTLKEVF 294
Query: 375 RMATINGAKSVLWDNDIGS 393
R+AT+ G++++ D +IG+
Sbjct: 295 RLATLGGSQALGLDGEIGN 313
|
| >d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Hypothetical protein TM0936, probable catalytic domain species: Thermotoga maritima [TaxId: 2336]
Score = 160 bits (404), Expect = 6e-47
Identities = 84/310 (27%), Positives = 140/310 (45%), Gaps = 31/310 (10%)
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
NTH H L +G+A+D+ WL ++ P E +TE+ +Y T+L +E+ G+
Sbjct: 1 ALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIA 60
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKH 200
F + H +AKAV G+RA L + +D D +
Sbjct: 61 GFVD-MYFHEEWIAKAVRDFGMRALLTRGLVDSN----------GDDGGRLEENLKLYNE 109
Query: 201 HHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVD 260
+ +GRI + FG ++ L D A+ + +H+ E E + D
Sbjct: 110 WNGFEGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVTIHLYETSKEEYDLED----- 164
Query: 261 HGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GFAPIKEM 319
+ I + ++AH V + G+L VSH PAS +++ G AP++ M
Sbjct: 165 ------ILNIGLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNGIAPVQRM 218
Query: 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATI 379
+ + V+LGTDGA SNN +++ EM LASL+ K + +P L T L+M T
Sbjct: 219 IEHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKAQ--------NPRNLDVNTCLKMVTY 270
Query: 380 NGAKSVLWDN 389
+GA+++ + +
Sbjct: 271 DGAQAMGFKS 280
|
| >d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Clostridium acetobutylicum [TaxId: 1488]
Score = 154 bits (388), Expect = 2e-44
Identities = 71/320 (22%), Positives = 126/320 (39%), Gaps = 16/320 (5%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGI-ELIHSG 138
PG + H H SQ GI D +L+ WL++ +P E+ D T I +LI +G
Sbjct: 1 PGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNG 60
Query: 139 VTC---FAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKE 195
T FA E+ + G+ A + + MD + + +E
Sbjct: 61 TTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYN---CPDYLTENYITSLNDTEE 117
Query: 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD 255
+ K+ ++ ++ R + + ++ L+ ++ +++ + H++E E VV
Sbjct: 118 IILKYKDKSN-IVKPIITPRFVPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKS 176
Query: 256 TRKVDHGTVTFLDKIE-FLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRML-GF 313
K + DK F L AH + + EI L+ R V + HCP S + G
Sbjct: 177 LHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGSGM 236
Query: 314 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETV 373
P+++ L+ I V LG+D + + S+ + A +K + + L
Sbjct: 237 MPVRKYLNLGINVVLGSDISAGHT-CSLFKVIAYAIQNSKIKWQESGK--KDMFLSTSEA 293
Query: 374 LRMATINGAKSVLWDNDIGS 393
MAT G +GS
Sbjct: 294 FYMATKKGGSFF---GKVGS 310
|
| >d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094 {Environmental samples} Length = 336 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Hypothetical protein GOS 1943094 species: Environmental samples
Score = 144 bits (362), Expect = 2e-40
Identities = 80/336 (23%), Positives = 132/336 (39%), Gaps = 24/336 (7%)
Query: 80 PGFVNTHVHTSQQLAKGI--ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHS 137
P +VNTH H Q L KG D L WL + + + E ++ + IEL S
Sbjct: 1 PAWVNTHHHLFQSLLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARS 60
Query: 138 GVTCFAEAGGQH--------VSEMAKAVELLGLRACLVQSTMDCG----EGLPASWAVRT 185
G A+ + + + + E LGLR L++ LP + T
Sbjct: 61 GCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLLRGGATQTRQLEADLPTALRPET 120
Query: 186 TDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAE 245
D + + L A++H A+ +R + + A + G+ MH
Sbjct: 121 LDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPREMRETAAVARRLGLRMHSHL 180
Query: 246 IPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPA 305
V F + ++L +++ AH V V+ EI LL++ G V+HCP
Sbjct: 181 SETVGYQDSAYSMYGKSPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHCPQ 240
Query: 306 SAMRMLG-FAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE-------- 356
S R+ P++EM A + VS+G DGA SN ++ E+++ L + R
Sbjct: 241 SNGRLGSGICPVREMADAGVPVSIGVDGAASNEAADMISEVHMTWLAQRARLGMLAQPAY 300
Query: 357 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392
+ A V+ T GA+ + D ++G
Sbjct: 301 RGGSFEGGAGAASIAEVIHWGTAGGARVMGLD-EVG 335
|
| >d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Bradyrhizobium japonicum [TaxId: 375]
Score = 143 bits (359), Expect = 5e-40
Identities = 60/329 (18%), Positives = 117/329 (35%), Gaps = 19/329 (5%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGI-ELIHSG 138
PGF++ H+H Q G + L+ WL I+P E + + + + L+ +G
Sbjct: 1 PGFIDGHIHLPQTRVLGAYGE-QLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAG 59
Query: 139 VTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198
T + E R V + + + + + T ++ + K L A
Sbjct: 60 TTTCQAFTSSSPVATEELFEEASRRNMRVIAGLTGIDRNAPAEFIDTPENFYRDSKRLIA 119
Query: 199 KHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-TGIHMHVAEIPYENQVVMDTR 257
++H GR R A+ LL + + E ++ H++E P E V+
Sbjct: 120 QYHD--KGRNLYAITPRFAFGASPELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEH 177
Query: 258 KVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIK 317
+ +K + + H V++++ E +S+ G V CP S + +
Sbjct: 178 PDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNLFLGSGLFRL 237
Query: 318 EML---HADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANG----------TTD 364
+ +S GTD N S++ + A + +G +
Sbjct: 238 GRATDPEHRVKMSFGTDVGGGNR-FSMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAE 296
Query: 365 PAALPAETVLRMATINGAKSVLWDNDIGS 393
L T+ GA+ + D+ +G+
Sbjct: 297 RNKLSPYRGFWSVTLGGAEGLYIDDKLGN 325
|
| >d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824 {Deinococcus radiodurans [TaxId: 1299]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: DR0824-like domain: Hypothetical protein DR0824 species: Deinococcus radiodurans [TaxId: 1299]
Score = 119 bits (297), Expect = 3e-31
Identities = 48/330 (14%), Positives = 89/330 (26%), Gaps = 53/330 (16%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
P VN H H + A W+ + + + L G
Sbjct: 1 PPPVNAHTHLDMSAYEFQALP--YFQWIPEVVIRGRH----LRGVAAAQAGADTLTRLGA 54
Query: 140 TCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAK 199
+ M + L L ++ D+ + + +
Sbjct: 55 GGVGDIVW-APEVMDALLAREDLSGTLYFEVLNPFPD--------KADEVFAAARTHLER 105
Query: 200 HHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH----------------- 242
+R+ + RL+ D A + +H
Sbjct: 106 WRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTGGGP 165
Query: 243 -------VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR 295
+V+ D V +LD++ L H V V +I ++R
Sbjct: 166 LWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVAR 225
Query: 296 AG-VKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKG 354
AG V+ ++ G A + V+LGTD S +++ +E+ A + G
Sbjct: 226 AGCAVVTCPRSNHHLECGTFDWPAFAAAGVEVALGTDSVASGETLNVREEVTFARQLYPG 285
Query: 355 REVFANGTTDPAALPAETVLRMATINGAKS 384
L ++R A G +
Sbjct: 286 -------------LDPRVLVRAAVKGGQRV 302
|
| >d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Cytosine deaminase catalytic domain domain: Cytosine deaminase catalytic domain species: Escherichia coli [TaxId: 562]
Score = 99.2 bits (245), Expect = 5e-24
Identities = 41/335 (12%), Positives = 96/335 (28%), Gaps = 35/335 (10%)
Query: 82 FVNTHVHTSQQLAKGIAD---DVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSG 138
FV H+H G + L + +R ++ +T +D I +G
Sbjct: 2 FVEPHIHLDTTQTAGQPNWNQSGTLFEGI-ERWAERKALLTHDDVKQRAWQTLKWQIANG 60
Query: 139 VTCFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYA 198
+ + + +L ++ + P + + + L
Sbjct: 61 IQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNG-----EALLE 115
Query: 199 KHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK 258
+ + L +T +A+++ I +H EI E ++T
Sbjct: 116 EALRLGADVVGAIPHFEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVA 175
Query: 259 VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-------- 310
++ + ++ LL +G+ P + +
Sbjct: 176 ALAHHEGMGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPLVNIHLQGRFDTYP 235
Query: 311 --LGFAPIKEMLHADICVSLGTD----GAPSNNRMSIVDEMYLASLINKGREVFANGTTD 364
G +KEML + I V G D +++ +++ + +
Sbjct: 236 KRRGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQ----------L 285
Query: 365 PAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399
L + T + A+++ + + AG
Sbjct: 286 MGYGQINDGLNLITHHSARTLNLQD--YGIAAGNS 318
|
| >d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Uncharacterized protein BL1453 species: Bifidobacterium longum [TaxId: 216816]
Score = 89.4 bits (219), Expect = 2e-20
Identities = 36/339 (10%), Positives = 79/339 (23%), Gaps = 40/339 (11%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGV 139
PG +N H H Q + S + + + L+ SGV
Sbjct: 1 PGLINAHTHLFSQGKPL-NPKLATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGV 59
Query: 140 TCFAEAGGQH--------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQ 191
T G + + + L + + + + + T ++
Sbjct: 60 TTIRTLGDVGYEVVTLRDQIDAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEART 119
Query: 192 SQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFK-------------TG 238
+ + +A Q + + M
Sbjct: 120 AVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIVGAHAQS 179
Query: 239 IHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGV 298
+ + +D + + + LL +
Sbjct: 180 PEGVRRSLLAGVDTIEHGSVLDDELIGMFRHNPNALRGYSALIPTLSAGLPLTLLGQDVT 239
Query: 299 KVSHCPASAMRMLG---FAPIKEMLHADICVSLGTD-GAPSNNRMSIVDEMYLASLINKG 354
++ + + + ++ A + + +GTD G + + E+ L
Sbjct: 240 GITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYATWRELELL------ 293
Query: 355 REVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393
A L AT A + D + GS
Sbjct: 294 --------VAYAGFSPAEALHAATAVNASILGVDAETGS 324
|
| >d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Agrobacterium tumefaciens [TaxId: 358]
Score = 85.0 bits (208), Expect = 3e-19
Identities = 47/333 (14%), Positives = 107/333 (32%), Gaps = 51/333 (15%)
Query: 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIW----------PYESNMTEEDSYISTLL 129
P ++ H H + + ++ L ++ I +++E L
Sbjct: 1 PALIDCHTHLVFGGNRAMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALP 60
Query: 130 CGIELIHSGVT------CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAV 183
L+ GV+ + + + A L LR + ++ PA +
Sbjct: 61 RLDTLLSEGVSTIEIKSGYGLDIETELKMLRVARRLETLRPVRIVTSYLAAHATPADYKG 120
Query: 184 RTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHV 243
R D K H +G G + + + + + A++ + +H
Sbjct: 121 RNADYITDVVLPGLEKAHA--EGLADAVDGFCEGIAFSVKEIDRVFAAAQQRGLPVKLHA 178
Query: 244 AEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303
++ ++ N L + H +++ T L++AG
Sbjct: 179 EQLSNLGG----------------AELAASYNALSADHLEYLDETGAKALAKAGTVAVLL 222
Query: 304 PASAMRML--GFAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFAN 360
P + + P++ + A ++L TD P ++ S++ M + + + +
Sbjct: 223 PGAFYALREKQLPPVQALRDAGAEIALATDCNPGTSPLTSLLLTMNMGATLFR------- 275
Query: 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393
+ E L T N AK++ + G+
Sbjct: 276 -------MTVEECLTATTRNAAKALGLLAETGT 301
|
| >d2q09a2 c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Probable 4-imidazolone-5-propanoate amidohydrolase GOS 1928421 species: Environmental samples
Score = 82.3 bits (201), Expect = 3e-18
Identities = 42/333 (12%), Positives = 97/333 (29%), Gaps = 53/333 (15%)
Query: 80 PGFVNTHVH-----------TSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTL 128
PG ++ H H +Q A+ + + +E+ + L
Sbjct: 1 PGLIDCHTHLIFAGSRAEEFELRQKGVPYAEIARKGGGIISTV-RATRAASEDQLFELAL 59
Query: 129 LCGIELIHSGVTCFAEAGGQHVSEMAKAVELLGLRACL------VQSTMDCGEGLPASWA 182
LI GVT G ++ + L R V++T+ +P +
Sbjct: 60 PRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGEALPIRVKTTLLAAHAVPPEYR 119
Query: 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMH 242
+E+ A G + + + + A ++ + H
Sbjct: 120 DDPDSWVETICQEIIPAAAEA--GLADAVDVFCEHIGFSLAQTEQVYLAADQYGLAVKGH 177
Query: 243 VAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302
+ ++ + L H +++ I L+ GV +
Sbjct: 178 MDQLSNLG----------------GSTLAANFGALSVDHLEYLDPEGIQALAHRGVVATL 221
Query: 303 CPASAMRMLG--FAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFA 359
P + + P+ + A + +++ +D P + +S+ M +A +
Sbjct: 222 LPTAFYFLKETKLPPVVALRKAGVPMAVSSDINPGTAPIVSLRMAMNMACTLFG------ 275
Query: 360 NGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392
L + T + A+++ +G
Sbjct: 276 --------LTPVEAMAGVTRHAARALGEQEQLG 300
|
| >d2bb0a2 c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]} Length = 300 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Bacillus subtilis [TaxId: 1423]
Score = 73.5 bits (178), Expect = 3e-15
Identities = 49/331 (14%), Positives = 90/331 (27%), Gaps = 50/331 (15%)
Query: 80 PGFVNTHVH----------TSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLL 129
PG V+ H H + +L D+ +EE+
Sbjct: 1 PGLVDPHTHLVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHF 60
Query: 130 CGIELIHSGVTCFAEAGG-----QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR 184
++ G T G + + + + L + + G
Sbjct: 61 HLQRMLSYGTTTAEVKSGYGLEKETELKQLRVAKKLHESQPVDLVSTFMGAHAIPPEYQN 120
Query: 185 TTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVA 244
DD + L + F + + + F IH
Sbjct: 121 DPDDFLDQMLSLLPEIKEQELASFADIFTETGVFTVSQSRRYLQKAAEAGFGLKIHADEI 180
Query: 245 EIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCP 304
+ ++ + V H V + I L+ AG P
Sbjct: 181 DPLGGAELAGKLKAVSA------------------DHLVGTSDEGIKKLAEAGTIAVLLP 222
Query: 305 ASAMRML--GFAPIKEMLHADICVSLGTD-GAPSNNRMSIVDEMYLASLINKGREVFANG 361
+ + +A + M+ +CVSL TD S+ +I M +A+L K
Sbjct: 223 GTTFYLGKSTYARARAMIDEGVCVSLATDFNPGSSPTENIQLIMSIAALHLK-------- 274
Query: 362 TTDPAALPAETVLRMATINGAKSVLWDNDIG 392
+ AE + T+N A ++ + G
Sbjct: 275 ------MTAEEIWHAVTVNAAYAIGKGEEAG 299
|
| >d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]} Length = 310 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Xaa-Pro dipeptidase species: Alteromonas macleodii [TaxId: 28108]
Score = 65.8 bits (158), Expect = 1e-12
Identities = 32/341 (9%), Positives = 84/341 (24%), Gaps = 60/341 (17%)
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G ++ HVH Q+ + + + + SG T
Sbjct: 1 GLMDMHVHFGQEYQSKAQAPIKVEREMQAILATQH---------------AYVTFKSGFT 45
Query: 141 CFAEAGGQHVSEMAKAVELLGLR---------------------ACLVQSTMDCGEGLPA 179
+ G + ++ + + ++ D +P
Sbjct: 46 TVRQVGDSGLVAISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTNGKAVDDYDYPVPE 105
Query: 180 SWAVRTTDDCIQSQKELYAKHHHAADGRI--RIWFGIRQIMNATDRLLLETRDMAREFKT 237
V + + ++ Y + + + N ++
Sbjct: 106 QGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDY 165
Query: 238 GIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 297
G+ + V E VD +E + + + + ++
Sbjct: 166 GMWVAVHAHGAEGMKRAIKAGVDSIEHGTFMDLEAMDLMIENGTYYVPTISAGEFVAEKS 225
Query: 298 VKVSHCPAS------AMRMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLI 351
+ P ++ ++ + ++ GTD + + E
Sbjct: 226 KIDNFFPEIVRPKAASVGPQISDTFRKAYEKGVKIAFGTDAGVQKHG-TNWKEFVYMVE- 283
Query: 352 NKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392
+PA ++ AT+ AK + ++ +G
Sbjct: 284 --------------NGMPAMKAIQSATMETAKLLRIEDKLG 310
|
| >d3be7a2 c.1.9.18 (A:57-359) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Zn-dependent arginine carboxypeptidase species: Unidentified organism [TaxId: 32644]
Score = 62.4 bits (149), Expect = 2e-11
Identities = 36/336 (10%), Positives = 84/336 (25%), Gaps = 57/336 (16%)
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G +++HVH +KG + + ++ + + +G T
Sbjct: 1 GLMDSHVHIVGNDSKG----------------EESIADSSHMGTVWGVVNAEKTLMAGFT 44
Query: 141 CFAEAGGQH----------------VSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVR 184
G + M + LG+ + E +S V
Sbjct: 45 TVRNVGAANYADVSVRDAIERGVINGPTMLVSGPALGITGGHCDHNLLPPEFNYSSEGVV 104
Query: 185 TTDD-----CIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239
+ +++K A G + T + D A +
Sbjct: 105 DSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKV 164
Query: 240 HM--HVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 297
H + ++NN + + ++V+ +G ++AG
Sbjct: 165 AAHAHGLIGIKAAIKAGVDSVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAKAG 224
Query: 298 VKVSHCPASAM-RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGRE 356
++ + ++ GTD ++ +
Sbjct: 225 IREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIFDHG-DNAKQFAYMVE------ 277
Query: 357 VFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392
+ ++ +TI A + +IG
Sbjct: 278 ---------WGMTPLEAIQASTIKTATLFGIE-NIG 303
|
| >d2r8ca2 c.1.9.18 (A:58-368) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Uncharacterized protein EAJ56179 species: Unidentified organism [TaxId: 32644]
Score = 59.3 bits (141), Expect = 2e-10
Identities = 39/344 (11%), Positives = 72/344 (20%), Gaps = 65/344 (18%)
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
G ++ HVH I ++ + L + + ++ G T
Sbjct: 1 GLIDLHVHVV-----AIEFNLPRVATL-----------PNVLVTLRAVPIMRAMLRRGFT 44
Query: 141 CFAEAGGQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASW------------------- 181
+AGG L L S + +
Sbjct: 45 TVRDAGGAGYPFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYMPPDSPCGCCVR 104
Query: 182 ------------AVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETR 229
VR K + + + +
Sbjct: 105 VGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAE 164
Query: 230 DMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTE 289
R H + + ++ T+
Sbjct: 165 AQGRGTYVLAHAYTPAAIARAVRCGVRTIEHGNLIDDETARLVAEHGAYVVPTLVTYDAL 224
Query: 290 IGLLSRAGVKVSHCPASAM-RMLGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLA 348
+ G+ A G I+ M A + + GTD R DE +
Sbjct: 225 ASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGEAQR-LQSDEFRIL 283
Query: 349 SLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392
+ L V+ ATI A+ + + +G
Sbjct: 284 A----------------EVLSPAEVIASATIVSAEVLGMQDKLG 311
|
| >d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain species: Escherichia coli [TaxId: 562]
Score = 51.0 bits (120), Expect = 8e-08
Identities = 32/332 (9%), Positives = 77/332 (23%), Gaps = 55/332 (16%)
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
GF++ ++ V M + SG T
Sbjct: 1 GFIDVQLN--------GCGGVQFNDTAEAVSVETLEIMQKA------------NEKSGCT 40
Query: 141 CF-AEAGGQHVSEMAKAVELLGLR-----ACLVQSTMDCGEGLPASWAVRTTDDCIQSQK 194
+ M + V ++ + ++ + +
Sbjct: 41 NYLPTLITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDA 100
Query: 195 ELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHM--------HVAEI 246
L AD ++ + L + + +
Sbjct: 101 ALVDFLCENADVITKVTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITF 160
Query: 247 PYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPAS 306
M + E + A + V++ I R
Sbjct: 161 ATHLYNAMPYITGREPGLAGAILDEADIYCGIIADGLHVDYANIRNAKRLKGDKLCLVTD 220
Query: 307 AMRMLGF------APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFAN 360
A G K + + + S + +++++ + +L+
Sbjct: 221 ATAPAGANIEQFIFAGKTIYYRNGLCVDENG-TLSGSSLTMIEGV--RNLVEHCG----- 272
Query: 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIG 392
+ + VLRMAT+ A+++ + +G
Sbjct: 273 -------IALDEVLRMATLYPARAIGVEKRLG 297
|
| >d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} Length = 118 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Uncharacterized protein BL1453 species: Bifidobacterium longum [TaxId: 216816]
Score = 47.1 bits (111), Expect = 2e-07
Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 4/69 (5%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQD-RIKAIGQSADILQQFSQMADQIIDLQSQILL 79
L +A IVT DK + RN + V D RI+ + S + +D +I++
Sbjct: 6 FALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIET---SIPAEYHYLDGTGKIVM 62
Query: 80 PGFVNTHVH 88
+
Sbjct: 63 LEVGKSADL 71
|
| >d2bb0a1 b.92.1.10 (A:3-73,A:374-415) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]} Length = 113 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Bacillus subtilis [TaxId: 1423]
Score = 46.2 bits (109), Expect = 4e-07
Identities = 9/82 (10%), Positives = 27/82 (32%), Gaps = 10/82 (12%)
Query: 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMAT 378
+++ +++ + G + M + + E G + + A A
Sbjct: 7 LINIGQLLTMESSGPRAGKSMQDLHVI----------EDAVVGIHEQKIVFAGQKGAEAG 56
Query: 379 INGAKSVLWDNDIGSLEAGKKV 400
+ + + +L+AG+
Sbjct: 57 YEADEIIDCSGRLVTLKAGRSA 78
|
| >d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]} Length = 102 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Uncharacterized protein EAJ56179 species: Unidentified organism [TaxId: 32644]
Score = 42.7 bits (100), Expect = 5e-06
Identities = 10/87 (11%), Positives = 28/87 (32%), Gaps = 6/87 (6%)
Query: 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL 78
+T + N ++ D + + + + I+ + +ID++ + +
Sbjct: 1 TTFLFRNGALLDPDHP-DLLQGFEILIEDGFIREVSDKPIKSS-----NAHVIDVKGKTI 54
Query: 79 LPGFVNTHVHTSQQLAKGIADDVDLMT 105
+P V + VD +
Sbjct: 55 MPRIVPGAHADVLVVDGNPLKSVDCLL 81
|
| >d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} Length = 127 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: D-hydantoinase species: Bacillus sp. AR9 [TaxId: 301298]
Score = 42.7 bits (100), Expect = 8e-06
Identities = 19/130 (14%), Positives = 37/130 (28%), Gaps = 11/130 (8%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
+ +VT V + +R+ AIG + + ID ++P
Sbjct: 2 KWIRGGTVVTAADT----YQADVLIEGERVVAIGHQLSV------NGAEEIDATGCYVIP 51
Query: 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVT 140
V + ++ P+E M +S L G ++
Sbjct: 52 IAVGSDADIVIFDPHVKRTLSVETHHMNVDYNPFE-GMEVYGEVVSVLSRGSFVVRDKQF 110
Query: 141 CFAEAGGQHV 150
GQ++
Sbjct: 111 VGQAGSGQYI 120
|
| >d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase {Escherichia coli [TaxId: 562]} Length = 105 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Isoaspartyl dipeptidase domain: Isoaspartyl dipeptidase species: Escherichia coli [TaxId: 562]
Score = 40.7 bits (95), Expect = 2e-05
Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 7/72 (9%)
Query: 17 SSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQ 76
++ +L A + + V V +I A+ + + ++DL Q
Sbjct: 6 AAGFTLLQGAHLYAPED----RGICDVLVANGKIIAVASN---IPSDIVPNCTVVDLSGQ 58
Query: 77 ILLPGFVNTHVH 88
IL P + +
Sbjct: 59 ILCPEILPGNDA 70
|
| >d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate deacetylase, NagA {Escherichia coli [TaxId: 562]} Length = 85 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA domain: N-acetylglucosamine-6-phosphate deacetylase, NagA species: Escherichia coli [TaxId: 562]
Score = 40.1 bits (93), Expect = 3e-05
Identities = 11/66 (16%), Positives = 17/66 (25%), Gaps = 8/66 (12%)
Query: 23 LHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGF 82
L I T + + V + IK++ + L IL P
Sbjct: 4 LTQGRIFTGHE---FLDDHAVVIADGLIKSVCP-----VAELPPEIEQRSLNGAILSPTL 55
Query: 83 VNTHVH 88
V
Sbjct: 56 AAGKVA 61
|
| >d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenosine/AMP deaminase domain: Adenosine deaminase (ADA) species: Plasmodium yoelii [TaxId: 5861]
Score = 40.6 bits (94), Expect = 2e-04
Identities = 29/220 (13%), Positives = 65/220 (29%), Gaps = 25/220 (11%)
Query: 153 MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWF 212
+AK + + +V +S + ++ + + +I +
Sbjct: 102 LAKWAVIEKYKEGVVLMEFRYSPTFVSSSYGLDVELIHKAFIKGIKNATELLNNKIHVAL 161
Query: 213 GIRQIMNATDRLLLETRDMAREFKTGIHMH---VAEIPYENQVVMDTRKVDHGTVTFLD- 268
+ + D A + K EI ++ + DHG +
Sbjct: 162 ICISDTGHAAASIKHSGDFAIKHKHDFVGFDHGGREIDLKDHKDVYHSVRDHGLHLTVHA 221
Query: 269 -------KIEFLQNNLLSAHTVWVNHTE--------IGLLSRAGVKVSHCPASAMRMLGF 313
+ L + + + H I L+ + + + CP S + +
Sbjct: 222 GEDATLPNLNTLYTAINILNVERIGHGIRVSESDELIELVKKKDILLEVCPISNLLLNNV 281
Query: 314 A-----PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLA 348
PI+++ A + VS+ +D P +I D
Sbjct: 282 KSMDTHPIRKLYDAGVKVSVNSDD-PGMFLSNINDNYEKL 320
|
| >d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} Length = 103 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Agrobacterium tumefaciens [TaxId: 358]
Score = 36.1 bits (83), Expect = 0.001
Identities = 14/73 (19%), Positives = 26/73 (35%), Gaps = 4/73 (5%)
Query: 19 STMILHNAVIVTMDKESRVF---RNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQS 75
+T + NA + T++ N + V RI G +D+ S AD+ D
Sbjct: 1 ATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLST-ADETTDCGG 59
Query: 76 QILLPGFVNTHVH 88
+ + +
Sbjct: 60 RWITLEAGKSADF 72
|
| >d1m7ja1 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]} Length = 55 | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: D-aminoacylase domain: N-acyl-D-aminoacid amidohydrolase species: Alcaligenes faecalis [TaxId: 511]
Score = 34.3 bits (79), Expect = 0.001
Identities = 14/60 (23%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80
IL ++ + R V V DRI A+G + A + ID+ +++ P
Sbjct: 4 YILSGGTVIDGT--NAPGRLADVGVRGDRIAAVGDLSAS------SARRRIDVAGKVVSP 55
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 400 | |||
| d1p1ma2 | 281 | Hypothetical protein TM0936, probable catalytic do | 100.0 | |
| d2i9ua2 | 310 | Guanine deaminase {Clostridium acetobutylicum [Tax | 100.0 | |
| d2uz9a2 | 313 | Guanine deaminase {Human (Homo sapiens) [TaxId: 96 | 100.0 | |
| d2paja2 | 336 | Hypothetical protein GOS_1943094 {Environmental sa | 100.0 | |
| d2imra2 | 308 | Hypothetical protein DR0824 {Deinococcus radiodura | 99.97 | |
| d2ooda2 | 325 | Guanine deaminase {Bradyrhizobium japonicum [TaxId | 99.95 | |
| d1ra0a2 | 320 | Cytosine deaminase catalytic domain {Escherichia c | 99.91 | |
| d2bb0a2 | 300 | Imidazolonepropionase {Bacillus subtilis [TaxId: 1 | 99.89 | |
| d2q09a2 | 301 | Probable 4-imidazolone-5-propanoate amidohydrolase | 99.89 | |
| d2puza2 | 301 | Imidazolonepropionase {Agrobacterium tumefaciens [ | 99.88 | |
| d2p9ba2 | 324 | Uncharacterized protein BL1453 {Bifidobacterium lo | 99.81 | |
| d3be7a2 | 303 | Zn-dependent arginine carboxypeptidase {Unidentifi | 99.78 | |
| d2qs8a2 | 310 | Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: | 99.74 | |
| d2p9ba1 | 118 | Uncharacterized protein BL1453 {Bifidobacterium lo | 99.72 | |
| d2r8ca2 | 311 | Uncharacterized protein EAJ56179 {Unidentified org | 99.72 | |
| d1yrra1 | 85 | N-acetylglucosamine-6-phosphate deacetylase, NagA | 99.69 | |
| d1kcxa2 | 334 | Dihydropyrimidinase related protein-1 {Mouse (Mus | 99.66 | |
| d1gkpa2 | 335 | D-hydantoinase {Thermus sp. [TaxId: 275]} | 99.66 | |
| d1onwa1 | 105 | Isoaspartyl dipeptidase {Escherichia coli [TaxId: | 99.66 | |
| d2ftwa2 | 334 | Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli | 99.63 | |
| d1ynya2 | 332 | D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} | 99.63 | |
| d2r8ca1 | 102 | Uncharacterized protein EAJ56179 {Unidentified org | 99.55 | |
| d1ejxc1 | 181 | alpha-Subunit of urease {Klebsiella aerogenes [Tax | 99.54 | |
| d2icsa2 | 267 | Putative adenine deaminase EF0837 {Enterococcus fa | 99.54 | |
| d1nfga1 | 127 | D-hydantoinase {Burkholderia pickettii [TaxId: 329 | 99.52 | |
| d1nfga2 | 330 | D-hydantoinase {Burkholderia pickettii [TaxId: 329 | 99.52 | |
| d2qs8a1 | 96 | Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: | 99.5 | |
| d2fvka2 | 384 | Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc | 99.49 | |
| d1ynya1 | 127 | D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} | 99.48 | |
| d1i0da_ | 331 | Phosphotriesterase (parathion hydrolase, PTE) {Pse | 99.46 | |
| d2fvka1 | 156 | Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc | 99.44 | |
| d1yrra2 | 297 | N-acetylglucosamine-6-phosphate deacetylase, NagA, | 99.43 | |
| d1gkra2 | 325 | L-hydantoinase {Arthrobacter aurescens [TaxId: 436 | 99.42 | |
| d1k1da1 | 128 | D-hydantoinase {Bacillus stearothermophilus [TaxId | 99.41 | |
| d1m7ja1 | 55 | N-acyl-D-aminoacid amidohydrolase {Alcaligenes fae | 99.35 | |
| d2vhla1 | 91 | N-acetylglucosamine-6-phosphate deacetylase, NagA | 99.33 | |
| d1gkra1 | 126 | L-hydantoinase {Arthrobacter aurescens [TaxId: 436 | 99.33 | |
| d1xrta2 | 310 | Two-domain dihydroorotase {Aquifex aeolicus [TaxId | 99.33 | |
| d2amxa1 | 357 | Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI | 99.3 | |
| d1gkpa1 | 123 | D-hydantoinase {Thermus sp. [TaxId: 275]} | 99.28 | |
| d4ubpc2 | 390 | alpha-subunit of urease, catalytic domain {Bacillu | 99.27 | |
| d1onwa2 | 284 | Isoaspartyl dipeptidase, catalytic domain {Escheri | 99.24 | |
| d1e9yb2 | 389 | alpha-subunit of urease, catalytic domain {Helicob | 99.23 | |
| d1bf6a_ | 291 | Phosphotriesterase homology protein {Escherichia c | 99.21 | |
| d1a4ma_ | 349 | Adenosine deaminase (ADA) {Mouse (Mus musculus) [T | 99.15 | |
| d1kcxa1 | 142 | Dihydropyrimidinase related protein-1 {Mouse (Mus | 99.1 | |
| d2ftwa1 | 150 | Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli | 98.98 | |
| d2vhla2 | 301 | N-acetylglucosamine-6-phosphate deacetylase, NagA, | 98.92 | |
| d1e9yb1 | 180 | alpha-Subunit of urease {Helicobacter pylori [TaxI | 98.86 | |
| d1m7ja3 | 358 | N-acyl-D-aminoacid amidohydrolase, catalytic domai | 98.78 | |
| d4ubpc1 | 180 | alpha-Subunit of urease {Bacillus pasteurii [TaxId | 98.74 | |
| d1o12a2 | 288 | N-acetylglucosamine-6-phosphate deacetylase, NagA, | 98.72 | |
| d1xrta1 | 112 | Two-domain dihydroorotase {Aquifex aeolicus [TaxId | 98.71 | |
| d2eg6a1 | 343 | Dihydroorotase {Escherichia coli [TaxId: 562]} | 98.64 | |
| d2puza1 | 103 | Imidazolonepropionase {Agrobacterium tumefaciens [ | 98.63 | |
| d1zzma1 | 259 | Putative deoxyribonuclease YjjV {Escherichia coli | 98.62 | |
| d1ejxc2 | 385 | alpha-subunit of urease, catalytic domain {Klebsie | 98.59 | |
| d1yixa1 | 265 | Putative deoxyribonuclease YcfH {Escherichia coli | 98.58 | |
| d1xwya1 | 260 | Deoxyribonuclease TatD (MttC) {Escherichia coli [T | 98.58 | |
| d1j6oa_ | 260 | Hypothetical protein TM0667 {Thermotoga maritima [ | 98.29 | |
| d2q09a1 | 103 | Probable 4-imidazolone-5-propanoate amidohydrolase | 97.95 | |
| d2bb0a1 | 113 | Imidazolonepropionase {Bacillus subtilis [TaxId: 1 | 97.94 | |
| d1o12a1 | 76 | N-acetylglucosamine-6-phosphate deacetylase, NagA | 97.21 | |
| d2dvta1 | 325 | Thermophilic reversible gamma-resorcylate decarbox | 97.15 | |
| d2ffia1 | 271 | Putative 2-pyrone-4,6-dicarboxylic acid hydrolase | 97.07 | |
| d2a3la1 | 628 | AMP deaminase (AMPD), catalytic domain {Thale cres | 96.85 | |
| d2icsa1 | 101 | Putative adenine deaminase EF0837 {Enterococcus fa | 96.44 | |
| d1ra0a1 | 103 | Cytosine deaminase {Escherichia coli [TaxId: 562]} | 96.36 | |
| d3be7a1 | 95 | Zn-dependent arginine carboxypeptidase {Unidentifi | 96.11 | |
| d2ooda1 | 140 | Guanine deaminase {Bradyrhizobium japonicum [TaxId | 95.72 | |
| d2paja1 | 139 | Hypothetical protein GOS_1943094 {Environmental sa | 94.98 | |
| d2i9ua1 | 109 | Guanine deaminase {Clostridium acetobutylicum [Tax | 91.65 | |
| d2hbva1 | 331 | 2-amino-3-carboxymuconate 6-semialdehyde decarboxy | 89.69 | |
| d1v77a_ | 202 | Ribonuclease P protein component 3, Rnp3 {Pyrococc | 89.48 | |
| d3be7a1 | 95 | Zn-dependent arginine carboxypeptidase {Unidentifi | 88.71 | |
| d2puza1 | 103 | Imidazolonepropionase {Agrobacterium tumefaciens [ | 87.68 | |
| d1p1ma1 | 123 | Hypothetical protein TM0936 {Thermotoga maritima [ | 82.04 |
| >d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Hypothetical protein TM0936, probable catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2e-38 Score=279.43 Aligned_cols=279 Identities=30% Similarity=0.498 Sum_probs=244.2
Q ss_pred cccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHHc
Q 015784 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVELL 160 (400)
Q Consensus 81 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~~ 160 (400)
||||+|+|+.++..++...+.++.+|+...+|+....+++++.+..++..+.+++++|+|++.|+. ...+...+.+++.
T Consensus 1 GLVnaH~Hl~~~~~rg~~~~~~l~~wl~~~~~~~~~~~t~e~~~~~~~~~~~e~l~~G~Ttv~d~~-~~~~~~~~a~~~~ 79 (281)
T d1p1ma2 1 ALFNTHTHAPMTLLRGVAEDLSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMY-FHEEWIAKAVRDF 79 (281)
T ss_dssp CEEEEEECGGGGGGTTSSCSCCHHHHHHTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEE-SSHHHHHHHHHHH
T ss_pred CcEehhhCHhHHHHHhccCCCCHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHhhCCeEEEeeec-cCcHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999986 5678888999999
Q ss_pred CCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeee
Q 015784 161 GLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIH 240 (400)
Q Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~ 240 (400)
|+|..++....+... .....+.+..+.++++... ++.+...+.++..+..+++.+.++.++|++.+++++
T Consensus 80 g~r~~~~~~~~~~~~---------~~~~~~~e~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~i~ 149 (281)
T d1p1ma2 80 GMRALLTRGLVDSNG---------DDGGRLEENLKLYNEWNGF-EGRIFVGFGPHSPYLCSEEYLKRVFDTAKSLNAPVT 149 (281)
T ss_dssp CCEEEEEEEECCBTT---------BCTTHHHHHHHHHHHHTTG-GGTEEEEEEECCTTTSCHHHHHHHHHHHHHTTCCEE
T ss_pred CCceEEeeeeeecCc---------cccccHHHHHHHHHHhcCc-cCceEEEEecccchhhhhhhhHHHHHHHhccCcccc
Confidence 999998877765432 1223345566666666543 357888889999999999999999999999999999
Q ss_pred EecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcccHHHH
Q 015784 241 MHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFAPIKEM 319 (400)
Q Consensus 241 ~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~ 319 (400)
+|+.|+..+. ..++.+...|+++++.++.|+.++++++++++++.|+.+++||.+|+++ .+.+|+++|
T Consensus 150 iH~~e~~~e~-----------~~~~~l~~~g~l~~~~~~~H~~~~~~~di~~la~~~~~vv~cP~sn~~lg~~~~~~~~~ 218 (281)
T d1p1ma2 150 IHLYETSKEE-----------YDLEDILNIGLKEVKTIAAHCVHLPERYFGVLKDIPFFVSHNPASNLKLGNGIAPVQRM 218 (281)
T ss_dssp EEESCSTTCC-----------CCTHHHHTTTTTTSCEEEEECTTCCGGGTTTTTTSSEEEEECHHHHHHTTCCCCCHHHH
T ss_pred ccccCCcccc-----------hhHHHHHHcCCCCccccccceeeecHHHHHHHHhcCCccccccchhhhhcccchhHHHH
Confidence 9999887542 3667788899999999999999999999999999999999999999988 788999999
Q ss_pred HHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCC
Q 015784 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDN 389 (400)
Q Consensus 320 ~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~ 389 (400)
+++|++|++|||+.+++...|++++|+.+..+.+.. ....++++++|+++|.|+|++||++.
T Consensus 219 ~~~Gv~v~LGTD~~~s~~~~d~~~em~~a~~~~~~~--------~~~~~~~~~~l~~aT~~gA~aLGl~~ 280 (281)
T d1p1ma2 219 IEHGMKVTLGTDGAASNNSLNLFFEMRLASLLQKAQ--------NPRNLDVNTCLKMVTYDGAQAMGFKS 280 (281)
T ss_dssp HHTTCEEEECCCCTTTTSCCCHHHHHHHHHHHHHTT--------CTTSSCHHHHHHHHTHHHHHHHTCSC
T ss_pred HhCCCeEEEECCCCCCCCCcCHHHHHHHHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 999999999999988877899999999988877643 34568999999999999999999963
|
| >d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=8.2e-38 Score=279.97 Aligned_cols=304 Identities=23% Similarity=0.294 Sum_probs=250.5
Q ss_pred ecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHH-HHHHHHHHHHHhcCcceeeccCcCC---HHHHHH
Q 015784 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSY-ISTLLCGIELIHSGVTCFAEAGGQH---VSEMAK 155 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~GvTt~~~~~~~~---~~~~~~ 155 (400)
|||||+|+|+.++..++...+.++.+|+...+|+....+.+++.+ ......+.+++++|+|++.++.... .....+
T Consensus 1 PG~vdaH~H~~~~~~rg~~~~~~l~~wl~~~~~p~~~~~~~~d~~~~~~~~~~~e~l~~GtTtv~d~~~~~~~~~~~~~~ 80 (310)
T d2i9ua2 1 PGMNDLHAHASQYKNLGIGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFATLHKDSTIELFN 80 (310)
T ss_dssp ECEEEEEEEGGGGGGTTCCCSSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHH
T ss_pred CCCEehhhChhhhhhhhccCCCCHHHHHHHhHHHHHHhcCCHHHHHHHHHHHHHHHHHcCCcceeeeeccchhhhHHHHH
Confidence 999999999999999999999999999999999877666555544 4455577899999999999876443 345678
Q ss_pred HHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHc
Q 015784 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (400)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (400)
.+.+.++|...+....+.+.. .+........+....+...++... .+.+...++++.....+++.++.+.+.++++
T Consensus 81 a~~~~gir~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~e~~~~~~~~a~~~ 156 (310)
T d2i9ua2 81 MLIKSGIGAYVGKVNMDYNCP---DYLTENYITSLNDTEEIILKYKDK-SNIVKPIITPRFVPSCSNELMDGLGKLSYKY 156 (310)
T ss_dssp HHHHHTCEEEEECEECCSSCC---TTSCCCHHHHHHHHHHHHHHHTTT-CSSEEECBEECCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHhCccccccceeccCCcc---ccchhhHHHHHHHHHHHHHHhhcc-ccccceeecccCCCccCHHHHHHHHHHhhcc
Confidence 889999999988777665422 222334455566677777776654 3577888899999999999999999999999
Q ss_pred CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCC-eeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCc
Q 015784 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNN-LLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGF 313 (400)
Q Consensus 236 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~ 313 (400)
++++++|+.|+..+.......++......+.+...+.++.+ .++.|+.++++++++++++.|+.+++||.+|+++ .+.
T Consensus 157 ~~~~~~H~~E~~~e~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~H~~~~~~~~i~~la~~g~~vv~cP~sn~~l~~g~ 236 (310)
T d2i9ua2 157 RLPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAHCIHSSKEEINLIKRNNVTIVHCPTSNFNLGSGM 236 (310)
T ss_dssp TCCEEEEESCCHHHHHHHHHHCTTCSSHHHHHHHTTCSSSSCEEEEECCSCCHHHHHHHHHTTCEEEECHHHHHHTTCCC
T ss_pred ccceeehhccchHHHHHHHHHhcccccHHHHHHhcCCccCCceeeeeeeeechhHHHHHHhcCCEEEEeecccccccCCc
Confidence 99999999999999888888888877777899999988764 7779999999999999999999999999999998 889
Q ss_pred ccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 015784 314 APIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 314 ~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~ 393 (400)
+|+++|+++||+|++|||+.++ ++.|++.+|+.+....+..... .......++++|+|+|+|.|+|++|| |+||
T Consensus 237 ~pv~~l~~~Gv~v~lGTD~~~~-~~~dm~~~m~~a~~~~~~~~~~--~~~~~~~l~~~e~l~~aT~~gA~alG---riGS 310 (310)
T d2i9ua2 237 MPVRKYLNLGINVVLGSDISAG-HTCSLFKVIAYAIQNSKIKWQE--SGKKDMFLSTSEAFYMATKKGGSFFG---KVGS 310 (310)
T ss_dssp CCHHHHHHTTCEEEECCCBTTB-CCSCHHHHHHHHHHHHHHHHHH--TTSCSCCCCHHHHHHHHTHHHHTTTS---SCSS
T ss_pred ccccchhccCceEEEecCCCCC-CCCCHHHHHHHHHHHHHHhhcc--ccCCCCCCCHHHHHHHHHHHHHHHhc---CCCC
Confidence 9999999999999999998765 4689999999998776543211 11234459999999999999999998 4775
|
| >d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-37 Score=278.59 Aligned_cols=308 Identities=23% Similarity=0.367 Sum_probs=256.5
Q ss_pred ecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhh-HHHHHHHHHHHHHhcCcceeeccCcCCH---HHHHH
Q 015784 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEED-SYISTLLCGIELIHSGVTCFAEAGGQHV---SEMAK 155 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~GvTt~~~~~~~~~---~~~~~ 155 (400)
|||||+|+|+.++..++...+.++.+|+...+|+....+...+ .+......+..+++.|+|++.+++.... ....+
T Consensus 1 PGfIdaH~Hl~~~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~tt~~~~~~~~~~~~~~~~~ 80 (313)
T d2uz9a2 1 PGLVDTHIHASQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFATIHTDSSLLLAD 80 (313)
T ss_dssp ECEEEEEEEGGGGGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSCHHHHHHHHH
T ss_pred CCCCcHhhChhhhhhhhccCCCCHHHHHHHhHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCeEeeecccccccchhHHHH
Confidence 9999999999999999999999999999998887766665444 3455556778899999999998765443 33456
Q ss_pred HHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHc
Q 015784 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREF 235 (400)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~ 235 (400)
.+.+.|+|.......+.....++. ........+....++++.+.....+.++....++..+..+++.++++.+.|++.
T Consensus 81 a~~~~g~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~l~~~~~~a~~~ 158 (313)
T d2uz9a2 81 ITDKFGQRAFVGKVCMDLNDTFPE--YKETTEESIKETERFVSEMLQKNYSRVKPIVTPRFSLSCSETLMGELGNIAKTR 158 (313)
T ss_dssp HHHHHTCEEEEECEECSCCSSSTT--SCCCHHHHHHHHHHHHHHHHHHTCSSEEEEEEECCGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCcccccceeccCCcccch--hhhhHHHHHHHHHHHHHHhhcccccceeEEEeccccccccHHHHHHHHHHhhcc
Confidence 678889999887766655432221 222355667777788888777777889999999999999999999999999999
Q ss_pred CCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCcc
Q 015784 236 KTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGFA 314 (400)
Q Consensus 236 ~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~~ 314 (400)
++++.+|+.++..+...+..........++.+...+.++.+..+.|+.++++++++++++.|+.+++||.+++++ .+.+
T Consensus 159 g~~~~~H~~e~~~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~e~~~l~~~g~~~~~~P~~~~~~~~~~~ 238 (313)
T d2uz9a2 159 DLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHERGASIAHCPNSNLSLSSGFL 238 (313)
T ss_dssp TCEEEEEESCSHHHHHHHHHHSTTSSSHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCCC
T ss_pred ccceeeehhcchhHHHHHHHhhcccCChHHHHHHcCCcCCcceEEeeeecchhHHHHHhhhcccccccchhhhhcccccc
Confidence 999999999999888888777777777899999999999999999999999999999999999999999999998 8899
Q ss_pred cHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 015784 315 PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 315 ~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~ 393 (400)
|++++.++||++++|||+.+. ++.+++.+|+.+..+.+..... ...+..++++|+|+++|.|+|++||+++++||
T Consensus 239 ~v~~l~~~Gv~valGTD~~~~-~~~~~~~~~~~a~~~~~~~~~~---~~~~~~~~~~e~l~~AT~ngA~aLg~~~~iGS 313 (313)
T d2uz9a2 239 NVLEVLKHEVKIGLGTDVAGG-YSYSMLDAIRRAVMVSNILLIN---KVNEKSLTLKEVFRLATLGGSQALGLDGEIGN 313 (313)
T ss_dssp CHHHHHHTTCEEEECCCTTTS-CCCCHHHHHHHHHHHHHHHHHT---TSSSSCCCHHHHHHHHTHHHHHHTTCTTTSSS
T ss_pred chhhhhccCceEEEeCCCCCC-CCCCHHHHHHHHHHHHHHHhhc---CCCCCCCCHHHHHHHHHHHHHHHhCCCCCcCc
Confidence 999999999999999998543 6789999999988765432111 12345699999999999999999999999997
|
| >d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094 {Environmental samples} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Hypothetical protein GOS 1943094 species: Environmental samples
Probab=100.00 E-value=1.8e-32 Score=247.90 Aligned_cols=311 Identities=27% Similarity=0.368 Sum_probs=214.0
Q ss_pred ecccccCcCCccccccccc--CCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcC--------C
Q 015784 80 PGFVNTHVHTSQQLAKGIA--DDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQ--------H 149 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~--------~ 149 (400)
|||||+|+|+.++.+++.. .+.++.+|+...+++....+++++.+..+...+.+++++|||++.|++.. .
T Consensus 1 PGlInaH~Hl~~s~~rg~~~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~~~~~ 80 (336)
T d2paja2 1 PAWVNTHHHLFQSLLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHNYVYYPGMPFDS 80 (336)
T ss_dssp ECEECCCCCGGGGGCCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECCCCCCTTCSSCH
T ss_pred CCCEehhhChhhhccccccccCCCCHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHhCCCeEEEecccccccccchhH
Confidence 9999999999999888754 56788999999999988899999999999999999999999999997422 1
Q ss_pred HHHHHHHHHHcCCeEEEecccccCCCCCCcccc----cCCchHHHHHHHHHHHHhccCCCCC--eEEEeeccccccCCHH
Q 015784 150 VSEMAKAVELLGLRACLVQSTMDCGEGLPASWA----VRTTDDCIQSQKELYAKHHHAADGR--IRIWFGIRQIMNATDR 223 (400)
Q Consensus 150 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~e 223 (400)
.....+.+...|+|................... ......................... .............+++
T Consensus 81 ~~~~~~~~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (336)
T d2paja2 81 SAILFEEAEKLGLRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTTVLYSISPR 160 (336)
T ss_dssp HHHHHHHHHHTTCEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTTTTTSSCHH
T ss_pred HHHHHHHHHHhCceeEeecceeccCcccccccchhhhhhhHHHHHHHHHHHHHHhhhhcccccceeeecccccCcccCHH
Confidence 345678899999999887776655433222211 1122233334444444443332222 3334445556678899
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEEC
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~ 303 (400)
.+....+.+++.++++++|+.+...........++. .+...+...+.++......|+.+.++.+++.+++.++.+++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~l~~~~~~~~~~ 238 (336)
T d2paja2 161 EMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGK--SPVAFCGEHDWLGSDVWYAHLVKVDADEIALLAQTGTGVAHC 238 (336)
T ss_dssp HHHHHHHHHHHTTCEEEEECC-------------CC--CHHHHHHHTTCCSTTEEEESCCSCCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHhhhhccCCceeeeccccchhhHHHHHhcCC--ccccccccccccccccccccceecchHHHHHHhhccccceec
Confidence 999999999999999999999988777666655554 488899999999999999999999999999999999999999
Q ss_pred ccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhccccc--------ccCCCCCCCCCCHHHHH
Q 015784 304 PASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREV--------FANGTTDPAALPAETVL 374 (400)
Q Consensus 304 p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~al 374 (400)
|.++.++ .+..|++.++++||+|++|||+.+++++.|++.+|+.+..+.+.... .........++|++|+|
T Consensus 239 p~~~~~~~~~~~~~~~l~~~Gv~valGTD~~~s~~~~d~~~emr~a~~~~r~~~~~~~~~~~~~~~~~~~~~~~t~~eal 318 (336)
T d2paja2 239 PQSNGRLGSGICPVREMADAGVPVSIGVDGAASNEAADMISEVHMTWLAQRARLGMLAQPAYRGGSFEGGAGAASIAEVI 318 (336)
T ss_dssp HHHHHCC-----CCTTHHHHTCCEEECCCHHHHCSCCSHHHHHHHHHHHHHHTC-------------------CCHHHHH
T ss_pred cchhhccCccccchhhHHhcCCeEEEEcCCCCCCCcccHHHHHHHHHHHHHHhhccccccccccccccCCCCCCCHHHHH
Confidence 9999988 78899999999999999999987766788999999999887654210 01111234679999999
Q ss_pred HHHhHHHHHHcCCCCCccc
Q 015784 375 RMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 375 ~~~T~~~A~~lg~~~~~G~ 393 (400)
+++|.|+|++||++ ++|+
T Consensus 319 ~~aT~~gA~aLgld-~iGk 336 (336)
T d2paja2 319 HWGTAGGARVMGLD-EVGK 336 (336)
T ss_dssp HHHTHHHHHHHTCT-TSSC
T ss_pred HHHHHHHHHHhCcc-ccCC
Confidence 99999999999996 4663
|
| >d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824 {Deinococcus radiodurans [TaxId: 1299]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: DR0824-like domain: Hypothetical protein DR0824 species: Deinococcus radiodurans [TaxId: 1299]
Probab=99.97 E-value=5.8e-30 Score=228.30 Aligned_cols=281 Identities=20% Similarity=0.224 Sum_probs=223.5
Q ss_pred ecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCCHHHHHHHHHH
Q 015784 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQHVSEMAKAVEL 159 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~ 159 (400)
|||||+|+|+..+..++.. .++.+|+...+++... .+.+..+...+..++++|+|++.|+. .......+....
T Consensus 1 PGlIdaH~Hl~~s~~~~~~--~~~~~~l~~~~~~~~~----~~~~~~a~~~~~~~l~~G~Ttv~d~~-~~~~~~~~~~~~ 73 (308)
T d2imra2 1 PPPVNAHTHLDMSAYEFQA--LPYFQWIPEVVIRGRH----LRGVAAAQAGADTLTRLGAGGVGDIV-WAPEVMDALLAR 73 (308)
T ss_dssp SCCCEEEEESSCCHHHHHH--CHHHHTSHHHHHHHTT----CCHHHHHHHHHHHHHHTTCCCEEEEE-CSHHHHHHHHTC
T ss_pred CCccchhhChhhhCccccC--CCHHHHHHHHHhcccc----ccHHHHHHHHHHHHHHcCCeEEEehh-cCHHHHHHHHHH
Confidence 9999999999887766543 4567787765544322 12345566677889999999999987 456666677778
Q ss_pred cCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCee
Q 015784 160 LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGI 239 (400)
Q Consensus 160 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v 239 (400)
.+++........... .......+....+.++.+.......+.....++..+..+.+.+......++..+.++
T Consensus 74 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (308)
T d2imra2 74 EDLSGTLYFEVLNPF--------PDKADEVFAAARTHLERWRRLERPGLRLGLSPHTPFTVSHRLMRLLSDYAAGEGLPL 145 (308)
T ss_dssp TTCCEEEEEEECBCC--------GGGHHHHHHHHHHHHHHHHTTCBTTEEEEEEECCSSSBCHHHHHHHHHHHHHHTCCB
T ss_pred hCcCeEEEeeecCCC--------CCCHHHHHHHHHHHHHHHhccCCCceEEeeecccccccchHHHHHHhhhccccCccc
Confidence 888887765544322 112345566667777777777777888888888888999999999999999999999
Q ss_pred eEecCCCchhhhHHhhhcCC------------------------CCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHh
Q 015784 240 HMHVAEIPYENQVVMDTRKV------------------------DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR 295 (400)
Q Consensus 240 ~~H~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~ 295 (400)
..|+.+...+.......+.. ...+++++...++++.+..+.|+.++.+++++++++
T Consensus 146 ~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~g~l~~~~~~~h~~~~~~~~~~~~~~ 225 (308)
T d2imra2 146 QIHVAEHPTELEMFRTGGGPLWDNRMPALYPHTLAEVIGREPGPDLTPVRYLDELGVLAARPTLVHMVNVTPDDIARVAR 225 (308)
T ss_dssp EEEESCSHHHHHHHHHSCSTTGGGSCGGGSCSSHHHHHTSCCCTTCCHHHHHHHHTCGGGCCEEEECCSCCHHHHHHHHH
T ss_pred eeeeecccchhhhhhhhccchhhhhhhhhhHHHhhhhhhcccccCCCHHHHHHHCCCCCCCeeeeecccchhhhhhhhhh
Confidence 99999987766655544321 234678999999999999999999999999999999
Q ss_pred cCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 296 AGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 296 ~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
.+..++.||.++... .+..++++|.++||+|++|||++++++..+++.+|+.+..+.+ +++++|+|
T Consensus 226 ~g~~~~~~p~~~~~~~~~~~~~~~l~~aGv~valGTD~~~~~~~~~~~~e~~~a~~~~~-------------g~tp~e~l 292 (308)
T d2imra2 226 AGCAVVTCPRSNHHLECGTFDWPAFAAAGVEVALGTDSVASGETLNVREEVTFARQLYP-------------GLDPRVLV 292 (308)
T ss_dssp HTCCEEECHHHHHHTTCCCCCHHHHHHTTCCEEECCCCHHHHSCSCTHHHHHHHHHHCT-------------TSCHHHHH
T ss_pred cCCccccccccccccccccchHHHHHHCCCcEEEECCCCCCCCchhHHHHHHHHHHHcC-------------CCCHHHHH
Confidence 999999999999887 7889999999999999999998766567889999999876542 58999999
Q ss_pred HHHhHHHHHHcCCC
Q 015784 375 RMATINGAKSVLWD 388 (400)
Q Consensus 375 ~~~T~~~A~~lg~~ 388 (400)
+++|.|+|++||+.
T Consensus 293 ~~aT~~gA~~LGl~ 306 (308)
T d2imra2 293 RAAVKGGQRVVGGR 306 (308)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999985
|
| >d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Bradyrhizobium japonicum [TaxId: 375]
Probab=99.95 E-value=3.7e-26 Score=204.62 Aligned_cols=307 Identities=20% Similarity=0.296 Sum_probs=224.6
Q ss_pred ecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhH-HHHHHHHHHHHHhcCcceeeccCcCCHH---HHHH
Q 015784 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDS-YISTLLCGIELIHSGVTCFAEAGGQHVS---EMAK 155 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~GvTt~~~~~~~~~~---~~~~ 155 (400)
|||||+|+|+.++..++.. +.++.+|+...+|+....+.+++. +......++.++.+|+|++.+++..... ...+
T Consensus 1 PGlID~H~Hl~~~~~~g~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~Tt~~d~~~~~~~~~~~~~~ 79 (325)
T d2ooda2 1 PGFIDGHIHLPQTRVLGAY-GEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFTSSSPVATEELFE 79 (325)
T ss_dssp ECEEEEEEEGGGTTCTTCC-SCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEECCSSHHHHHHHHH
T ss_pred CCCcchhhCccccccccCC-CCcHHHHHHHhhHHHHHhcCCHHHHHHHHHHHHHHHHhCCeEEEeeccccCchhhHHHHH
Confidence 9999999999988887754 458999999988887776655544 3444557788999999999998654433 3356
Q ss_pred HHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHH-HHHH
Q 015784 156 AVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD-MARE 234 (400)
Q Consensus 156 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~-~a~~ 234 (400)
.+...+.+...+....... .+..........+....+........ ..+............+++....... .+..
T Consensus 80 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (325)
T d2ooda2 80 EASRRNMRVIAGLTGIDRN---APAEFIDTPENFYRDSKRLIAQYHDK--GRNLYAITPRFAFGASPELLKACQRLKHEH 154 (325)
T ss_dssp HHHHHTCCEEECCEECCSS---SCTTTCCCHHHHHHHHHHHHHHHTTB--TTEEEEEEECBGGGCCHHHHHHHHHHHHHC
T ss_pred HHHhhcccceeeeeccCCC---CCcccccCHHHHHHHHHHHHHhhccc--cceeeeeecccccccCHHHHHHHHhhHhhc
Confidence 6777777777766554432 11122223344444444444443332 3445545555556666666555544 4455
Q ss_pred cCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEECccccccc-cCc
Q 015784 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHCPASAMRM-LGF 313 (400)
Q Consensus 235 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~p~~~~~~-~~~ 313 (400)
.++.++.|+.+...+........+.....++.+...+..+.+.+..|+.+++.+++..++..+..++.+|.++... .+.
T Consensus 155 ~~~~~~~~~~e~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (325)
T d2ooda2 155 PDCWVNTHISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHGVYLSNNEFRRMSKKGAAVVFCPCSNLFLGSGL 234 (325)
T ss_dssp TTSEEEEECSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECCTTCCHHHHHHHHHHTCEEEECHHHHHHTTCCC
T ss_pred cCCceeeehhccHHHHHHHHHhcccCcchHHHHHhcCcccCceeeeeeeeechhhhhhhhccccccccccchhhcccccc
Confidence 7889999999999888888877777777888999999999999999999999999999999999999999988876 677
Q ss_pred ccHHHH--HHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCC----------CCCCCCCHHHHHHHHhHHH
Q 015784 314 APIKEM--LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGT----------TDPAALPAETVLRMATING 381 (400)
Q Consensus 314 ~~~~~~--~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~l~~~~al~~~T~~~ 381 (400)
.|.+.+ .+.|+.+++|||.... ...+++.+|+.+..+........... ....++|+.|+|+++|.||
T Consensus 235 ~~~~~~~~~~~gv~~~~gtD~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~eal~~AT~ng 313 (325)
T d2ooda2 235 FRLGRATDPEHRVKMSFGTDVGGG-NRFSMISVLDDAYKVGMCNNTLLDGSIDPSRKDLAEAERNKLSPYRGFWSVTLGG 313 (325)
T ss_dssp CCHHHHTCTTSCCEEEECCCBTTB-SCCCHHHHHHHHHHHHHHHHHHSSSSSCGGGCCHHHHHHTCCCHHHHHHHTTHHH
T ss_pred CcHHHHHHhhcCCceEeecCcccC-CCccHHHHHHHHHHHHHhhcccccccccchhhhhhccccCCCCHHHHHHHHHHHH
Confidence 777766 4689999999998765 56889999999876643221111100 0135799999999999999
Q ss_pred HHHcCCCCCccc
Q 015784 382 AKSVLWDNDIGS 393 (400)
Q Consensus 382 A~~lg~~~~~G~ 393 (400)
|++||++|++||
T Consensus 314 A~aLG~~d~iGS 325 (325)
T d2ooda2 314 AEGLYIDDKLGN 325 (325)
T ss_dssp HHHTTCTTTSSS
T ss_pred HHHhCCCcccCc
Confidence 999999999997
|
| >d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Cytosine deaminase catalytic domain domain: Cytosine deaminase catalytic domain species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=2.1e-25 Score=199.03 Aligned_cols=288 Identities=15% Similarity=0.143 Sum_probs=182.1
Q ss_pred ccccCcCCcccccccc---cCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC---H---HH
Q 015784 82 FVNTHVHTSQQLAKGI---ADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH---V---SE 152 (400)
Q Consensus 82 ~iD~H~H~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~---~---~~ 152 (400)
|||+|+|+.++...+. .....+.+|+... ......++.++.+......+..+++.|||++.+++... . ..
T Consensus 2 FID~H~Hl~~~~~~~~~~~~~~g~l~e~i~~~-~~~~~~~t~ed~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~ 80 (320)
T d1ra0a2 2 FVEPHIHLDTTQTAGQPNWNQSGTLFEGIERW-AERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDATLTALKA 80 (320)
T ss_dssp EEEEEECTTTTTCTTSSSCCSSCCHHHHHHHH-HHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTTCHHHHH
T ss_pred CeecCcCcchhcccCCCCCCCCCCHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHHHhCCeEEEEeccccccchHHHHHH
Confidence 9999999976655443 3445677777543 34556788999888888889999999999999864321 1 11
Q ss_pred HHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHH
Q 015784 153 MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMA 232 (400)
Q Consensus 153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a 232 (400)
...................... ... ....... .........................+++.+..+++.|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A 149 (320)
T d1ra0a2 81 MLEVKQEVAPWIDLQIVAFPQE------GIL-SYPNGEA----LLEEALRLGADVVGAIPHFEFTREYGVESLHKTFALA 149 (320)
T ss_dssp HHHHHHHHTTTCEEEEEEECTT------CSS-SSTTHHH----HHHHHHHTTCSEECCCGGGSSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccccccccccccc------ccc-CcHHHHH----HHHHHHHhcccccccCCCCCCCccccHHHHHHHHHHH
Confidence 1222222222222222211111 000 1111111 2222222222222211112222334577899999999
Q ss_pred HHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEec-------CCChhHHHHHHhcCCeEEECcc
Q 015784 233 REFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTV-------WVNHTEIGLLSRAGVKVSHCPA 305 (400)
Q Consensus 233 ~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~-------~~~~~~i~~~~~~~~~~~~~p~ 305 (400)
++.++++.+|+.+........... ......... +..+....|+. ....++++.+++.++.++.+|.
T Consensus 150 ~~~g~~~~~h~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~ 222 (320)
T d1ra0a2 150 QKYDRLIDVHCDEIDDEQSRFVET------VAALAHHEG-MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGINFVANPL 222 (320)
T ss_dssp HHHTCEEEEEECCSSCTTCCHHHH------HHHHHHHHT-CGGGEEEEECGGGGGSCHHHHHHHHHHHHHHTCEEEECHH
T ss_pred HHcCCCeeeeecccchhHHHhhhh------HHHHHHHhh-cccccccccceeccccchhhhHHHHHHhhhcCcEEEeccc
Confidence 999999999998776544322211 111112221 22233444443 3346678889999999999999
Q ss_pred ccccc----------cCcccHHHHHHcCCcEEEcCCCCCC----CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 015784 306 SAMRM----------LGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFANGTTDPAALPAE 371 (400)
Q Consensus 306 ~~~~~----------~~~~~~~~~~~~Gv~v~~gtD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (400)
++..+ .+..|.+++.+.|+++++|||+... +...+++.+|+.+....+ ...++|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~~gtd~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~s~~ 292 (320)
T d1ra0a2 223 VNIHLQGRFDTYPKRRGITRVKEMLESGINVCFGHDGVFDPWYPLGTANMLQVLHMGLHVCQ----------LMGYGQIN 292 (320)
T ss_dssp HHHHHTTTTCCSSCCCCCCCHHHHHHTTCCEEECCBCSSBTTBSCCCCCHHHHHHHHHHHTT----------CCSHHHHH
T ss_pred hhhhhcccccccccccccCchhhHhhcCceEeecCCcCCCCCCCCCChhHHHHHHHHHHHhc----------cCCCCCHH
Confidence 87643 3567999999999999999997642 345789999998776553 23458999
Q ss_pred HHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 372 TVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 372 ~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
|+|+++|.|||++||+++ |+|++||+|
T Consensus 293 eal~~aT~ngA~aLgl~~--Gsi~~Gk~A 319 (320)
T d1ra0a2 293 DGLNLITHHSARTLNLQD--YGIAAGNSA 319 (320)
T ss_dssp GGGGGGTHHHHHHTTCSS--CSSCTTSBC
T ss_pred HHHHHHHHHHHHHhCCCC--CccCCCCCc
Confidence 999999999999999986 999999998
|
| >d2bb0a2 c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=2.6e-21 Score=170.41 Aligned_cols=278 Identities=19% Similarity=0.158 Sum_probs=173.4
Q ss_pred ecccccCcCCcccccccc-----cCCCChhHhhhhc--cc---cccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC
Q 015784 80 PGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDR--IW---PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH 149 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~-----~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~ 149 (400)
|||||+|+|+.....+.. ..+.++.++.... +. ......++++.+.........++..|+|++.+.....
T Consensus 1 PGlID~H~Hl~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~~~v~~~~~~~~~~l~~~~~~~~~~~~~~G~t~~~~~~~~~ 80 (300)
T d2bb0a2 1 PGLVDPHTHLVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYG 80 (300)
T ss_dssp ECEEECCBCCCCCSCCGGGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSC
T ss_pred CCeeccccCcCcccccchHHHHHhcCCCHHHHHHhcCCcchHHHHHhcCCHHHHHHHHHHHHHHHHhCCceeeecccccc
Confidence 999999999854332211 0112222221110 00 0012345666666666777889999999998754222
Q ss_pred --HH-------HHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccC
Q 015784 150 --VS-------EMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNA 220 (400)
Q Consensus 150 --~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (400)
.. ...........+...... .+ ...................+.+......... ...-........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 154 (300)
T d2bb0a2 81 LEKETELKQLRVAKKLHESQPVDLVSTFM---GA-HAIPPEYQNDPDDFLDQMLSLLPEIKEQELA--SFADIFTETGVF 154 (300)
T ss_dssp CSHHHHHHHHHHHHHHHHHSSSEEEEEEE---EE-SSCCGGGTTCHHHHHHHHHTTHHHHHHTTCC--SEEEEBBCTTSB
T ss_pred cchhHHHHHHHhhhhHHHhhccccccccc---cc-ccchhhhhhcHHHHHHHHHHHHHHhhhcccc--cccccccccccC
Confidence 11 111112222222211111 11 1122222223333333333333333222211 222234444566
Q ss_pred CHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeE
Q 015784 221 TDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKV 300 (400)
Q Consensus 221 ~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~ 300 (400)
+.+.+.++.+.+++.++++..|+....... ........+ ...+.|+.++.+++++.+++.+..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~------------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (300)
T d2bb0a2 155 TVSQSRRYLQKAAEAGFGLKIHADEIDPLG------------GAELAGKLK----AVSADHLVGTSDEGIKKLAEAGTIA 218 (300)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSSSCCS------------HHHHHHHTT----CSEEEECTTCCHHHHHHHHHHTCEE
T ss_pred CHHHHHHHHHHHHhhhhcccccccchhhhH------------HHHHHHHhC----CceEEEeeeccHHHHHHHHhcCcce
Confidence 788899999999999999999987654321 112222222 3457899999999999999999999
Q ss_pred EECccccccc--cCcccHHHHHHcCCcEEEcCCCCC-CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHH
Q 015784 301 SHCPASAMRM--LGFAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMA 377 (400)
Q Consensus 301 ~~~p~~~~~~--~~~~~~~~~~~~Gv~v~~gtD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~ 377 (400)
+.||.+++++ ....+++.|+++||++++|||+.+ +++..+++.+|+.+.... ++|++|||+++
T Consensus 219 ~~~~~s~~~l~~~~~~~~~~l~~~Gv~v~lgTD~~~~~~~~~~l~~~~~~a~~~~--------------gl~~~eal~~a 284 (300)
T d2bb0a2 219 VLLPGTTFYLGKSTYARARAMIDEGVCVSLATDFNPGSSPTENIQLIMSIAALHL--------------KMTAEEIWHAV 284 (300)
T ss_dssp EECHHHHHHTTCCCCCCHHHHHHTTCCEEECCCBBTTTBCCCCHHHHHHHHHHHS--------------CCCHHHHHHHT
T ss_pred eecchhhhhhhccccccHHHHHHCCCEEEEEeCCCCCCCchhhHHHHHHHHHHHc--------------CCCHHHHHHHH
Confidence 9999999876 445789999999999999999643 345678999998875332 49999999999
Q ss_pred hHHHHHHcCCCCCccc
Q 015784 378 TINGAKSVLWDNDIGS 393 (400)
Q Consensus 378 T~~~A~~lg~~~~~G~ 393 (400)
|.|||++||+++++|+
T Consensus 285 T~~~A~~lG~~~~~G~ 300 (300)
T d2bb0a2 285 TVNAAYAIGKGEEAGQ 300 (300)
T ss_dssp THHHHHHTTCTTTSSC
T ss_pred HHHHHHHhCcchhhCc
Confidence 9999999999999985
|
| >d2q09a2 c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Probable 4-imidazolone-5-propanoate amidohydrolase GOS 1928421 species: Environmental samples
Probab=99.89 E-value=2.7e-22 Score=175.90 Aligned_cols=278 Identities=15% Similarity=0.163 Sum_probs=166.0
Q ss_pred ecccccCcCCcccccccc-----cCCCChhHhhhhccc-----cccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC
Q 015784 80 PGFVNTHVHTSQQLAKGI-----ADDVDLMTWLHDRIW-----PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH 149 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~-----~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~ 149 (400)
|||||+|+|+.....+.. ..+.++.++.....+ ......+.++.+.........++..|+|++.+.....
T Consensus 1 PGlID~H~Hl~~~~~~~~e~~~~~~~~~~~~~~~~~~~i~~t~~~~~~~~~~~~~~~~~~~~~~~~~~G~t~~~~~~~~~ 80 (301)
T d2q09a2 1 PGLIDCHTHLIFAGSRAEEFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYG 80 (301)
T ss_dssp ECEEEEEECCCCCSCCHHHHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSC
T ss_pred CCeeccccCcCccCccchHHHHHhcCCCHHHHHHhCCCceehHHHHhcCCHHHHHHHHHHHHHHHhcCCeeeeccccccc
Confidence 999999999854321110 011222222111110 1112356667677777777889999999998754222
Q ss_pred --HHH-------HHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHH-HHHHHhccCCCCCeEEEeecccccc
Q 015784 150 --VSE-------MAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQK-ELYAKHHHAADGRIRIWFGIRQIMN 219 (400)
Q Consensus 150 --~~~-------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (400)
... .............. .+..+..++..+... ....+.... ............... ........
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 154 (301)
T d2q09a2 81 LTLEDELKMLRVARRLGEALPIRVKT---TLLAAHAVPPEYRDD-PDSWVETICQEIIPAAAEAGLADAV--DVFCEHIG 154 (301)
T ss_dssp CSHHHHHHHHHHHHHHHHHSSSEEEE---EEEEETSCCGGGTTC-HHHHHHHHHHTHHHHHHHTTCCSEE--EEBBSTTS
T ss_pred chhhHHHHHHHhhhhhhhhccccccc---ccccccccChhhccC-HHHHHHHHHHHHHhhhhhhhhhhhh--hhhhcccc
Confidence 111 11122222222211 112222233333222 111122111 111111111111111 11222233
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCe
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVK 299 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~ 299 (400)
.......+....+......+.+|+.+..... ........+ ...+.|+..+.+++++++++.++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~------------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 218 (301)
T d2q09a2 155 FSLAQTEQVYLAADQYGLAVKGHMDQLSNLG------------GSTLAANFG----ALSVDHLEYLDPEGIQALAHRGVV 218 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEESSSCCCS------------HHHHHHHTT----CSEEEECTTCCHHHHHHHHHHTCE
T ss_pred cchhhHHHHHHHHHHhcccceecccccchhH------------HHHHHHhcC----CceEeeeecCcHHHHHHHHHcCCC
Confidence 4455666777788889999999987654321 112222222 345789999999999999999999
Q ss_pred EEECccccccc-cC-cccHHHHHHcCCcEEEcCCCCC-CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 015784 300 VSHCPASAMRM-LG-FAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (400)
Q Consensus 300 ~~~~p~~~~~~-~~-~~~~~~~~~~Gv~v~~gtD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~ 376 (400)
++.||.++..+ .+ .+|+++|.++||++++|||..+ .+...+++.+++.+.... ++|++|||++
T Consensus 219 ~~~~~~s~~~l~~~~~~~~~~l~~aGv~v~lGTD~~~~~~~~~~l~~~~~~~~~~~--------------glt~~eal~~ 284 (301)
T d2q09a2 219 ATLLPTAFYFLKETKLPPVVALRKAGVPMAVSSDINPGTAPIVSLRMAMNMACTLF--------------GLTPVEAMAG 284 (301)
T ss_dssp EEECHHHHHHTTCCCCCCHHHHHHTTCCEEECCCCBTTTBCCCCHHHHHHHHHHHH--------------CCCHHHHHHH
T ss_pred cccCccHHhhhcccccCcHHHHHHCCCeEEEEeCCCCCCCCcchHHHHHHHHHHHc--------------CCCHHHHHHH
Confidence 99999999876 43 6799999999999999999643 334567899988876433 4999999999
Q ss_pred HhHHHHHHcCCCCCccc
Q 015784 377 ATINGAKSVLWDNDIGS 393 (400)
Q Consensus 377 ~T~~~A~~lg~~~~~G~ 393 (400)
+|.|||++||+++++|+
T Consensus 285 aT~~~A~~lG~~~~iG~ 301 (301)
T d2q09a2 285 VTRHAARALGEQEQLGQ 301 (301)
T ss_dssp TTHHHHHHTTCTTTSSS
T ss_pred HHHHHHHHhCcccccCc
Confidence 99999999999999884
|
| >d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.88 E-value=3.2e-21 Score=169.76 Aligned_cols=282 Identities=15% Similarity=0.161 Sum_probs=167.2
Q ss_pred ecccccCcCCccccccc-----ccCCCChhHhhhhcc--c---cccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC
Q 015784 80 PGFVNTHVHTSQQLAKG-----IADDVDLMTWLHDRI--W---PYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH 149 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~-----~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~ 149 (400)
|||||+|+|+.....+. ...+..+.++..... + ......+.++.+.........+++.|+|++.+.....
T Consensus 1 PGlID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~e~l~~~~~~~~~~~~~~G~t~~~~~~~~~ 80 (301)
T d2puza2 1 PALIDCHTHLVFGGNRAMEFEMRLNGATYEEIAKAGGGIVSSVRDTRALSDEVLVAQALPRLDTLLSEGVSTIEIKSGYG 80 (301)
T ss_dssp ECEEECCCCCCCSSCCHHHHHHHHTTCCHHHHHHTTCSHHHHHHHHHHSCHHHHHHHHHHHHHHHHTTTEEEEEEECCSC
T ss_pred CCeeccccCcCcCCccchHHHHhhcCCCHHHHHHhcCCccchHHHHhcCCHHHHHHHHHHHHHHHHHCCceEeccccccC
Confidence 99999999985422111 011222222222110 0 0112346667777777777889999999998754221
Q ss_pred --HHH---HHHHHHH-cCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHH
Q 015784 150 --VSE---MAKAVEL-LGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDR 223 (400)
Q Consensus 150 --~~~---~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 223 (400)
... ..+.... ..............+......+...............+.......... .............+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 158 (301)
T d2puza2 81 LDIETELKMLRVARRLETLRPVRIVTSYLAAHATPADYKGRNADYITDVVLPGLEKAHAEGLAD--AVDGFCEGIAFSVK 158 (301)
T ss_dssp CSHHHHHHHHHHHHHHTTTSSCEEEEEECCTTCCCGGGTTCHHHHHHHTHHHHHHHHHHTTCCS--EECCEESTTSBCHH
T ss_pred cchhhHHHHHHHHHHHHHhccccccccccccccchhhhhcchhhHHHHHHHHHHHHHHhhhhhh--hccccccccccCHH
Confidence 211 1111111 111111111111111111111111111111111111122221111111 11222233456778
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEEC
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~ 303 (400)
.+..+++.+.+.|+++..|+.+..... ........+ ...+.|+.+..++++..+.+.+..+..+
T Consensus 159 ~~~~~~~~a~~~g~~~~~h~~~~~~~~------------~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (301)
T d2puza2 159 EIDRVFAAAQQRGLPVKLHAEQLSNLG------------GAELAASYN----ALSADHLEYLDETGAKALAKAGTVAVLL 222 (301)
T ss_dssp HHHHHHHHHHHTTCCBEEEESSSSCCS------------HHHHHHHTT----CSEEEECTTCCHHHHHHHHHHTCEEEEC
T ss_pred HHHHHHHHHHHCCCceeeecccccchh------------HHHHHhhhc----cceeeeeecchHHHHHHHHhcCCeeeec
Confidence 899999999999999999987765421 122222222 3457888888999999999999999999
Q ss_pred ccccccc--cCcccHHHHHHcCCcEEEcCCCCC-CCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHH
Q 015784 304 PASAMRM--LGFAPIKEMLHADICVSLGTDGAP-SNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATIN 380 (400)
Q Consensus 304 p~~~~~~--~~~~~~~~~~~~Gv~v~~gtD~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~ 380 (400)
|.++... ...+|++.++++||+|++|||+.+ ..+..++..+++.+.... ++|++|||+++|.|
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~Gv~v~lGTD~~~~~~~~~~l~~~~~~~~~~~--------------gl~~~eal~~aT~~ 288 (301)
T d2puza2 223 PGAFYALREKQLPPVQALRDAGAEIALATDCNPGTSPLTSLLLTMNMGATLF--------------RMTVEECLTATTRN 288 (301)
T ss_dssp HHHHHHHTCCCCCCHHHHHHHTCCEEECCCCCSSSCCBCCHHHHHHHHHHHH--------------CCCHHHHHHHTTHH
T ss_pred cchhhhhcccccchHHHHHHCCCeEEEEeCCCCCCCccchHHHHHHHHHHHc--------------CCCHHHHHHHHHHH
Confidence 9988654 456899999999999999999653 334567888888765333 49999999999999
Q ss_pred HHHHcCCCCCccc
Q 015784 381 GAKSVLWDNDIGS 393 (400)
Q Consensus 381 ~A~~lg~~~~~G~ 393 (400)
||++||+++++||
T Consensus 289 ~A~~LGl~~~~GS 301 (301)
T d2puza2 289 AAKALGLLAETGT 301 (301)
T ss_dssp HHHHTTCTTTSSS
T ss_pred HHHHhCCCcCcCc
Confidence 9999999999997
|
| >d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Uncharacterized protein BL1453 species: Bifidobacterium longum [TaxId: 216816]
Probab=99.81 E-value=9.1e-20 Score=160.69 Aligned_cols=295 Identities=15% Similarity=0.067 Sum_probs=139.1
Q ss_pred ecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC-HHHHHHHHH
Q 015784 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH-VSEMAKAVE 158 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~-~~~~~~~~~ 158 (400)
|||||+|+|+.+..............+.. .........+.++.+......+.++++.|||++.++++.. .....+.+.
T Consensus 1 PGlID~H~H~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~~~~~~~~~~~ 79 (324)
T d2p9ba2 1 PGLINAHTHLFSQGKPLNPKLATPKGQRM-VATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLGDVGYEVVTLRDQI 79 (324)
T ss_dssp ECEEEEEECSCC------------------------------CHHHHHHHHHHHHHHTTEEEEEESCCSSSHHHHHHHHH
T ss_pred CCeeccccCccccCccccchhcccccchh-hhhhhhccCCHHHHHHHHHHHHHHHHhCCceEEeccCCCcchhHHHHHHh
Confidence 99999999997755443222222221111 1112223456667777778888999999999999976432 222222232
Q ss_pred HcCC----eEEEecccccCCCCC--CcccccCCchH-HHHHHHHHHHHhccCCCCCeEEE----------eeccccccCC
Q 015784 159 LLGL----RACLVQSTMDCGEGL--PASWAVRTTDD-CIQSQKELYAKHHHAADGRIRIW----------FGIRQIMNAT 221 (400)
Q Consensus 159 ~~g~----~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ 221 (400)
.... +.............. ...+....... ......+.... . ....... .........+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (324)
T d2p9ba2 80 DAGQILGPRILASGPLMAIPEGHGAPLIALTSGTPEEARTAVAQNLKA---G-VNAIKIAATGGVTDAQEIGEAGSPQMS 155 (324)
T ss_dssp HTTSSCCCEEECCCSCEECCCSSCCCCEECCSCCHHHHHHHHHHHHHT---T-CSCEEEECSCCTTSCCCC------CCC
T ss_pred hhhhccccccccccccccCCcccccccccccchhHHHHHHHHHHHHhh---c-cchhhhhcccccccccccccccchhcc
Confidence 3222 111111111110000 11111111111 11112221111 1 1111110 0111122345
Q ss_pred HHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcC-------CCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHH
Q 015784 222 DRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRK-------VDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLS 294 (400)
Q Consensus 222 ~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~ 294 (400)
..............+.....|................ ........+...+.........|........+..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (324)
T d2p9ba2 156 VEQMRAICDEAHQYGVIVGAHAQSPEGVRRSLLAGVDTIEHGSVLDDELIGMFRHNPNALRGYSALIPTLSAGLPLTLLG 235 (324)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSHHHHHHHHHHTCSEEEECCCCCHHHHHHHHCCTTSTTSCCEEECCHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHcCCccccccccchhhhHHHHhhhhhhhhhhhhhhhHHHHHHHcCccccccceeeecccccchHHHhh
Confidence 5566677777788888888887654432221111000 000011223333333334444444433333333222
Q ss_pred hc--CCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCC-CCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCH
Q 015784 295 RA--GVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPS-NNRMSIVDEMYLASLINKGREVFANGTTDPAALPA 370 (400)
Q Consensus 295 ~~--~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 370 (400)
+. +.....++..+... ....++++|.++|+++++|||.+.. ....+++++++.+.... |+|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~v~~GtD~~~~~~~~~~l~~el~~~~~~~--------------Gls~ 301 (324)
T d2p9ba2 236 QDVTGITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTGMTFVPQYATWRELELLVAYA--------------GFSP 301 (324)
T ss_dssp HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTTSTTSCTTCHHHHHHHHHHHH--------------CCCH
T ss_pred hcccCcccccchhhhhchhhhHHHHHHHHHcCCeEEEEeCCCCCcChhhHHHHHHHHHHHhc--------------CCCH
Confidence 21 22222222222222 3456889999999999999997543 34567888888765322 4999
Q ss_pred HHHHHHHhHHHHHHcCCCCCccc
Q 015784 371 ETVLRMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 371 ~~al~~~T~~~A~~lg~~~~~G~ 393 (400)
.|||+++|.|||++||+++++||
T Consensus 302 ~eaL~~aT~n~A~~lgl~d~~GS 324 (324)
T d2p9ba2 302 AEALHAATAVNASILGVDAETGS 324 (324)
T ss_dssp HHHHHHHTHHHHHHTTCTTTSSS
T ss_pred HHHHHHHHHHHHHHhCCCcCcCc
Confidence 99999999999999999999997
|
| >d3be7a2 c.1.9.18 (A:57-359) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Zn-dependent arginine carboxypeptidase species: Unidentified organism [TaxId: 32644]
Probab=99.78 E-value=9.1e-20 Score=159.70 Aligned_cols=158 Identities=12% Similarity=0.055 Sum_probs=103.5
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCC--CCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHh
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKV--DHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSR 295 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~ 295 (400)
..............+...+.....|................. ...................+.|.....+.......+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (303)
T d3be7a2 143 KQFTLEEMKAIVDEAHNHGMKVAAHAHGLIGIKAAIKAGVDSVEHASFIDDETIDMAIKNNTVLSMDIFVSDYILGEGAK 222 (303)
T ss_dssp BCSCHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCSEEEECTTCCHHHHHHHHHTTCEEECCCSTHHHHHTTTTT
T ss_pred cchhhHHHHHHHHHHHHhCcchhhhhhhhhhHHHHHHHhhhhhhhhccchhhhhhhcccceeEEEecccchhhhhhhhhh
Confidence 455666777888888999999888886654433322211100 000000001111111234456666655666666666
Q ss_pred cCCeEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 296 AGVKVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 296 ~~~~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
.+.....+|.++... .+..++++++++|+++++|||++.. ++.++..+|+.+.. .|+|+.|||
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~l~~aGv~v~lGTD~~~~-~~~~~~~el~~~~~---------------~Gls~~eaL 286 (303)
T d3be7a2 223 AGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGIF-DHGDNAKQFAYMVE---------------WGMTPLEAI 286 (303)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTTB-CTTCGGGHHHHHHH---------------TTCCHHHHH
T ss_pred ccCcHHHHhHHHHHhhhhHHHHHHHHHCCCeEEEEeCCCCc-ccHHHHHHHHHHHH---------------cCCCHHHHH
Confidence 666666666666555 6678999999999999999998755 45667778877652 259999999
Q ss_pred HHHhHHHHHHcCCCCCcc
Q 015784 375 RMATINGAKSVLWDNDIG 392 (400)
Q Consensus 375 ~~~T~~~A~~lg~~~~~G 392 (400)
+++|.|||++||++| +|
T Consensus 287 ~~aT~n~A~~lGl~D-~G 303 (303)
T d3be7a2 287 QASTIKTATLFGIEN-IG 303 (303)
T ss_dssp HTTTHHHHHHHTCSS-CS
T ss_pred HHHHHHHHHHhCCcc-cC
Confidence 999999999999987 46
|
| >d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Xaa-Pro dipeptidase species: Alteromonas macleodii [TaxId: 28108]
Probab=99.74 E-value=6e-17 Score=141.86 Aligned_cols=66 Identities=17% Similarity=0.236 Sum_probs=55.9
Q ss_pred cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCC
Q 015784 311 LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDND 390 (400)
Q Consensus 311 ~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~ 390 (400)
.+..|++.|.++||++++|||++.+ +..+++.+|..+.. .|+|+.|||+++|.|||++||++++
T Consensus 245 ~~~~~~~~l~~~Gv~v~lGTD~~~~-~~~~~~~el~~~~~---------------~Gls~~eaL~~aT~~~A~~LGl~d~ 308 (310)
T d2qs8a2 245 QISDTFRKAYEKGVKIAFGTDAGVQ-KHGTNWKEFVYMVE---------------NGMPAMKAIQSATMETAKLLRIEDK 308 (310)
T ss_dssp HHHHHHHHHHHHTCCBCCCCCBTTB-CTTCTTHHHHHHHH---------------TTCCHHHHHHHTTHHHHHHTTCTTT
T ss_pred hhhHHHHHHHHCCCeEEEecCCCCC-CccHHHHHHHHHHH---------------cCCCHHHHHHHHHHHHHHHhCcCCC
Confidence 4456899999999999999998755 45677788877652 3599999999999999999999999
Q ss_pred cc
Q 015784 391 IG 392 (400)
Q Consensus 391 ~G 392 (400)
+|
T Consensus 309 iG 310 (310)
T d2qs8a2 309 LG 310 (310)
T ss_dssp SS
T ss_pred cC
Confidence 87
|
| >d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Uncharacterized protein BL1453 species: Bifidobacterium longum [TaxId: 216816]
Probab=99.72 E-value=2.2e-18 Score=125.90 Aligned_cols=71 Identities=21% Similarity=0.209 Sum_probs=61.0
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEe-CCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVV-QDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~-~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
+..++|+|++|+|+++..+++++++|+|+ ||||++||+..+.+. +.+.++||++|++|||||||+|+|+..
T Consensus 3 ~~p~ai~na~iit~d~~~~v~~~~~ilI~~dG~I~~vg~~~~~~~---~~~~~viD~~Gk~v~PGlid~H~Hl~~ 74 (118)
T d2p9ba1 3 VEPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSI---PAEYHYLDGTGKIVMLEVGKSADLLVL 74 (118)
T ss_dssp CCCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCC---CTTCEEEECTTCEEECCTTSBCCEEEE
T ss_pred CccEEEEeeEEEeCCCCCceeeeEEEEEecCCeEEEEcccccccc---cceeEEEeccCcEEEeeecceeEEEEe
Confidence 45689999999999888888999999996 799999998655421 235799999999999999999999965
|
| >d2r8ca2 c.1.9.18 (A:58-368) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Uncharacterized protein EAJ56179 species: Unidentified organism [TaxId: 32644]
Probab=99.72 E-value=2.9e-18 Score=150.63 Aligned_cols=139 Identities=17% Similarity=0.124 Sum_probs=89.0
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcC
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAG 297 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~ 297 (400)
................+.+.....|.............. .....+...............+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~ 211 (311)
T d2r8ca2 151 FGYSEDEIRAIVAEAQGRGTYVLAHAYTPAAIARAVRCG-------------------VRTIEHGNLIDDETARLVAEHG 211 (311)
T ss_dssp BCSCHHHHHHHHHHHHHTTCCEEEEECSHHHHHHHHHTT-------------------CSEEEECTTCCHHHHHHHHHTT
T ss_pred ccccHHHHHHHHHHHHHhccccccccchhHHHHHHHHhh-------------------hcccccccchhhHHHHHhhhhc
Confidence 455667777788888889999888876544332222211 1112233332333333333333
Q ss_pred C---------------------eEEECccccccc-cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhccc
Q 015784 298 V---------------------KVSHCPASAMRM-LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGR 355 (400)
Q Consensus 298 ~---------------------~~~~~p~~~~~~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~ 355 (400)
. ....+|.++..+ ....+++.|+++||+|++|||++.. +....+.+|+.+.
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGv~v~~GTD~~~~-~~~~~~~el~~~~------ 284 (311)
T d2r8ca2 212 AYVVPTLVTYDALASEGEKYGLPPESIAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLGE-AQRLQSDEFRILA------ 284 (311)
T ss_dssp CEEECCTHHHHHHHHHTTTTTCCHHHHTTSTTTGGGHHHHHHHHHHTTCEECCCCCCCGG-GGGGTTHHHHHHT------
T ss_pred ccccccchhhhhhHhhhhhcCCchhhhhhHHHHHHhhhHHHHHHHHCCCeEEEEeCCCCC-chHHHHHHHHHHH------
Confidence 3 333333333333 4456899999999999999998754 3445566665532
Q ss_pred ccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 356 EVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 356 ~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
.++|+.|||+++|.|||++||+++++|
T Consensus 285 ----------~gls~~eaL~~ATi~~A~aLg~~d~iG 311 (311)
T d2r8ca2 285 ----------EVLSPAEVIASATIVSAEVLGMQDKLG 311 (311)
T ss_dssp ----------TTSCHHHHHHHTTHHHHHHTTCTTTSS
T ss_pred ----------cCCCHHHHHHHHHHHHHHHHCCCcCCC
Confidence 269999999999999999999999887
|
| >d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate deacetylase, NagA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA domain: N-acetylglucosamine-6-phosphate deacetylase, NagA species: Escherichia coli [TaxId: 562]
Probab=99.69 E-value=2.6e-17 Score=113.56 Aligned_cols=64 Identities=19% Similarity=0.207 Sum_probs=55.1
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCccc
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQQ 92 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~~ 92 (400)
++|+|++|||++ ..++++.|+|+||+|++|++..+.+ .+.++||++|++|+|||||.|+|....
T Consensus 2 ~al~n~rI~dg~---~~~~~~~i~i~~g~I~~Ig~~~~~p-----~~~~viDl~G~~l~PGlid~hvH~~~~ 65 (85)
T d1yrra1 2 YALTQGRIFTGH---EFLDDHAVVIADGLIKSVCPVAELP-----PEIEQRSLNGAILSPTLAAGKVANLTA 65 (85)
T ss_dssp EEEESSEEECSS---CEESSEEEEEETTEEEEEEEGGGSC-----TTCCEEECTTCEEEESCCTTSBCCEEE
T ss_pred eEEEeeEEECCC---CcEeccEEEEeccEEEEEccccccc-----ceeEEEecCCcEEEcccEecceeeccc
Confidence 579999999854 4678899999999999999876642 367999999999999999999998653
|
| >d1kcxa2 c.1.9.6 (A:67-400) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Dihydropyrimidinase related protein-1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.66 E-value=1.5e-15 Score=134.76 Aligned_cols=262 Identities=12% Similarity=0.093 Sum_probs=139.5
Q ss_pred ecccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccCcCC--------HH
Q 015784 80 PGFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAGGQH--------VS 151 (400)
Q Consensus 80 PG~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~~~~--------~~ 151 (400)
|||||+|+|+... .......+++...+ ++++++|||++.+|.... ++
T Consensus 1 PG~ID~HvH~reP---------------------~~G~~~kEd~~tgs----~AAa~GGvTtv~~mPnt~P~~~~~~~~~ 55 (334)
T d1kcxa2 1 PGGIDVNTYLQKP---------------------SQGMTSADDFFQGT----KAALAGGTTMIIDHVVPEPGSSLLTSFE 55 (334)
T ss_dssp ECEEEEEECTTCE---------------------ETTEECSSCHHHHH----HHHHHTTEEEEEEEECCCTTCCHHHHHH
T ss_pred CCeEeeeecCCCC---------------------CCCCcccchHHHHH----HHHHcCCceEEEECCCCCCCCCCHHHHH
Confidence 9999999999541 00111223444333 678999999999985221 12
Q ss_pred HHHHHHHHcC-CeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccccCCHHHHHHHHH
Q 015784 152 EMAKAVELLG-LRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRD 230 (400)
Q Consensus 152 ~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ 230 (400)
...+.++... +...+....... ......+...+.+ ..+...+++++........+.+.+.++++
T Consensus 56 ~~~~~a~~~s~~d~~~~~~~~~~------------~~~~~~el~~l~~---~~g~~~~ki~~~~~~~~~~~~~~l~~~~~ 120 (334)
T d1kcxa2 56 KWHEAADTKSCCDYSLHVDITSW------------YDGVREELEVLVQ---DKGVNSFQVYMAYKDLYQMSDSQLYEAFT 120 (334)
T ss_dssp HHHHHHHHHCSSEEEEEEEECCC------------CTTHHHHHHHHHH---TTCCCEEEEESCSTTTTCCCHHHHHHHHH
T ss_pred HHHHHhcccCcceeeEeeeeccC------------CcchHHHHHHHHH---hccCceeeeeeccCCCcccCHHHHHHHHH
Confidence 2233333322 333222222111 1111222222222 22223456666555556778889999999
Q ss_pred HHHHcCCeeeEecCCCchhhhHHhhh--cCCCC---------C-----hH-HHHhHhCCCCCCeeeEEecCCC-hhHHHH
Q 015784 231 MAREFKTGIHMHVAEIPYENQVVMDT--RKVDH---------G-----TV-TFLDKIEFLQNNLLSAHTVWVN-HTEIGL 292 (400)
Q Consensus 231 ~a~~~~~~v~~H~~~~~~~~~~~~~~--~~~~~---------~-----~~-~~l~~~~~~~~~~~~~h~~~~~-~~~i~~ 292 (400)
.+++.+..+.+|+.+........... .+... . .+ +.+.-....+.+..+.|...-. -+.++.
T Consensus 121 ~~~~~~~~v~~H~Ed~~l~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~ai~r~~~la~~~g~~~hi~HiSt~~~ve~i~~ 200 (334)
T d1kcxa2 121 FLKGLGAVILVHAENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAIAIAGRINCPVYITKVMSKSAADIIAL 200 (334)
T ss_dssp HHHHTTCEEEEECCCHHHHHHHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHHHHHHTCCEEEEEECCHHHHHHHHH
T ss_pred HHhccCceeEEecCCHHHHhccccchhhcCCcchhhccCCCCHHHHHHHHHHHHHHHhhcCCceeeccccchHHHHHHHH
Confidence 99999999999996543321111100 11100 0 11 1112122234456666665422 244566
Q ss_pred HHhcCCeEE--ECcccc------c---------cc-c---------CcccHHHHHHcCCcEEEcCCCCCCC---------
Q 015784 293 LSRAGVKVS--HCPASA------M---------RM-L---------GFAPIKEMLHADICVSLGTDGAPSN--------- 336 (400)
Q Consensus 293 ~~~~~~~~~--~~p~~~------~---------~~-~---------~~~~~~~~~~~Gv~v~~gtD~~~~~--------- 336 (400)
.++.|..++ .+|..- + .+ . ....+...++.|...+++|||.|..
T Consensus 201 ak~~g~~vt~e~~~~~l~l~~~~~~~~~~~~~~~~~~~pPlr~~~~d~eaL~~~l~~G~Id~I~SDHaP~~~e~K~~~~~ 280 (334)
T d1kcxa2 201 ARKKGPLVFGEPIAASLGTDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKD 280 (334)
T ss_dssp HHHHSCCEEEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGSS
T ss_pred HhccccceeeccchhheeecccccccCChhHhcceEeeeccCchhhhHHHHHHHhhcCCcceEecCCCCCCHHHhccCCC
Confidence 677777654 444321 0 00 0 1112344567899999999997641
Q ss_pred ---------CCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccc
Q 015784 337 ---------NRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 337 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~ 393 (400)
+++...-.+.+.. + +....+|+++++++.|.|||++||+..++|+
T Consensus 281 ~f~~ap~Gi~g~e~~l~~llt~-~-----------V~~g~isl~~~v~~~s~nPA~i~gL~p~KGr 334 (334)
T d1kcxa2 281 NFTLIPEGVNGIEERMTVVWDK-A-----------VATGKMDENQFVAVTSTNAAKIFNLYPRKGR 334 (334)
T ss_dssp CGGGSCCCBCCTTTHHHHHHHH-H-----------TTTTSSCHHHHHHHHTHHHHHHHTCTTTSSC
T ss_pred ChhhCCCCcccHHHHHHHHHHH-H-----------HHcCCCCHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 0111111111111 1 1344599999999999999999999877774
|
| >d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId: 275]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: D-hydantoinase species: Thermus sp. [TaxId: 275]
Probab=99.66 E-value=7.5e-16 Score=137.02 Aligned_cols=186 Identities=13% Similarity=0.163 Sum_probs=104.5
Q ss_pred CCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhh---HHh-------hhcCCCCChH-------HHHh
Q 015784 206 GRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQ---VVM-------DTRKVDHGTV-------TFLD 268 (400)
Q Consensus 206 ~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~---~~~-------~~~~~~~~~~-------~~l~ 268 (400)
..+++++........+++.+.++++.++..|..+.+|+.+...... ... ..+...+... +.+.
T Consensus 93 ~~~k~~~~~~~~~~~d~~~l~~~~~~~~~~~~~v~~h~ed~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~av~r~~~ 172 (335)
T d1gkpa2 93 SSFKIFLSYKNFFGVDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLLSEGKTGPEWHEPSRPEAVEAEGTARFAT 172 (335)
T ss_dssp CEEEEEECSTTTTBCCHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHTTCCSGGGTTTTSCHHHHHHHHHHHHH
T ss_pred cccccccccCCCccCCHHHHHHHHHHhhhcCCEEEEcCCcHHHHHHHHhhhhcccccCccccccchhhhhHHHHHHHHHH
Confidence 3456666666666788999999999999999999999965432110 010 0000111111 1111
Q ss_pred HhCCCCCCeeeEEecCCC-hhHHHHHHhcCCeEE--ECccccc--------------cccCccc---------HHHHHHc
Q 015784 269 KIEFLQNNLLSAHTVWVN-HTEIGLLSRAGVKVS--HCPASAM--------------RMLGFAP---------IKEMLHA 322 (400)
Q Consensus 269 ~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~~~--~~p~~~~--------------~~~~~~~---------~~~~~~~ 322 (400)
.....+.+..+.|..... -+.++.+++.|..++ +||...+ ++.-.+| +.+.+..
T Consensus 173 la~~~~~~~hi~HiSt~~~l~~i~~ak~~g~~it~e~~~~hl~l~~~~~~~~~~~~~~~k~~PPlRs~~d~~~L~~al~~ 252 (335)
T d1gkpa2 173 FLETTGATGYVVHLSCKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQ 252 (335)
T ss_dssp HHHHHTCEEEECSCCSHHHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHHHHHTTCCSSCCCCTHHHHHHHHHHHT
T ss_pred HHHHhCcccchhhhhhhhhhhhhhhhhhcCceEEeecccchhhcCHHHHhcCCchhcceecccCCCCHHHHHHHHHHHhc
Confidence 111222233334443321 234566677776644 4554321 0001123 3456778
Q ss_pred CCcEEEcCCCCCCCC------CCCHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 323 DICVSLGTDGAPSNN------RMSIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 323 Gv~v~~gtD~~~~~~------~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
|...+++|||.|... ..+++. +..+...+.. .+....+++++++++++.|||++||+.
T Consensus 253 G~id~i~SDHaP~~~e~K~~~~~~~~~~~~G~~gle~~lplll~~--------~V~~g~lsl~~~v~~~S~nPAri~Gl~ 324 (335)
T d1gkpa2 253 GFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRVNLLYTY--------GVSRGRLDIHRFVDAASTKAAKLFGLF 324 (335)
T ss_dssp TSSCEEECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHHHHHHHH--------HTTSSSCCHHHHHHHHTHHHHHHTTCT
T ss_pred CCccEEEecCCCCCHHHhccCCCChhhCCCChhHHHHHHHHHHHH--------HHHcCCCCHHHHHHHHHHHHHHHhCCC
Confidence 999999999976420 000110 0011111110 012445999999999999999999998
Q ss_pred CCccccccCcC
Q 015784 389 NDIGSLEAGKK 399 (400)
Q Consensus 389 ~~~G~i~~G~~ 399 (400)
+++|+|++|++
T Consensus 325 ~~KG~i~~G~D 335 (335)
T d1gkpa2 325 PRKGTIAVGSD 335 (335)
T ss_dssp TTSSSCCTTSB
T ss_pred CCCCeecCCCC
Confidence 88899999985
|
| >d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Isoaspartyl dipeptidase domain: Isoaspartyl dipeptidase species: Escherichia coli [TaxId: 562]
Probab=99.66 E-value=6.3e-17 Score=116.48 Aligned_cols=67 Identities=18% Similarity=0.147 Sum_probs=54.3
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
+..++|+|++||+++ .....+|+|+||+|++|++..+.+. .++.++||++|++|+|||||.|.|...
T Consensus 7 ~~~llikna~i~~~~----~~~~~dI~I~~g~I~~I~~~~~~~~---~~~~~vID~~G~~v~PG~ID~H~h~~~ 73 (105)
T d1onwa1 7 AGFTLLQGAHLYAPE----DRGICDVLVANGKIIAVASNIPSDI---VPNCTVVDLSGQILCPEILPGNDADLL 73 (105)
T ss_dssp GCCEEEESCEEESSS----EEEECEEEEETTEEEEEETTCCTTS---SSSCEEEECTTCEEEESCCTTSBCCEE
T ss_pred CCCEEEECcEEEcCC----CCeeeeEEEECCEEEEeccCccccc---CCCCeEEcCCCCEEeCCEeecccCcce
Confidence 457899999999864 3456799999999999998654321 235689999999999999999998654
|
| >d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Dihydropyrimidine amidohydrolase Pyd2 species: Dictyostelium discoideum [TaxId: 44689]
Probab=99.63 E-value=6.3e-15 Score=130.55 Aligned_cols=175 Identities=10% Similarity=0.034 Sum_probs=95.6
Q ss_pred CeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh--hcCCCCC--------------hH-HHHhH
Q 015784 207 RIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD--TRKVDHG--------------TV-TFLDK 269 (400)
Q Consensus 207 ~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~--~~~~~~~--------------~~-~~l~~ 269 (400)
..+.+.........+.+.+.++++.+++.+..+.+|+.+.......... ..+.... .+ +.+..
T Consensus 97 ~~k~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~E~~~~~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~~v~r~~~l 176 (334)
T d2ftwa2 97 SFKCFMAYKNSFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVI 176 (334)
T ss_dssp EEEEESSCTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTHHHHHHSCTHHHHHHHHHHHHH
T ss_pred ccceeeccccccccccHHHHHHHHHHhhcCCceeecchhHHHHhhcchhhhccCCCCcccccccCcHHHHHHHHHHHHHH
Confidence 4555554444455677889999999999999999999754432221111 1111000 00 11111
Q ss_pred hCCCCCCeeeEEecCCC-hhHHHHHHhcCCeEE--ECccccc---------------ccc----------CcccHHHHHH
Q 015784 270 IEFLQNNLLSAHTVWVN-HTEIGLLSRAGVKVS--HCPASAM---------------RML----------GFAPIKEMLH 321 (400)
Q Consensus 270 ~~~~~~~~~~~h~~~~~-~~~i~~~~~~~~~~~--~~p~~~~---------------~~~----------~~~~~~~~~~ 321 (400)
....+.+..+.|..... -+.++..++.|..++ +||..-+ .+. ....+...+.
T Consensus 177 a~~~~~~lhi~HiSt~~~~~~i~~ak~~G~~vt~e~~ph~L~l~~~~~~~~d~~~~~~~~~~PPlR~~~~d~~~L~~~l~ 256 (334)
T d2ftwa2 177 ADSVCTPVYIVHVQSIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGVLMDYLA 256 (334)
T ss_dssp HHHHTCCEEECSCCCHHHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHHHHHHHH
T ss_pred HHhhccceeeccccchhhhhhHHHhcccCCceeeccccceeeccHHHHhccchhhccceEeeccccccHhhhhhHHHHhh
Confidence 11223344444443321 234566677777654 4443211 000 0112333466
Q ss_pred cCCcEEEcCCCCCCCC------------------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHH
Q 015784 322 ADICVSLGTDGAPSNN------------------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAK 383 (400)
Q Consensus 322 ~Gv~v~~gtD~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~ 383 (400)
.|...+++|||.|... ++...-.+.+... +....+|+++++++.+.|||+
T Consensus 257 ~G~Id~iaSDHaPh~~e~K~~~~~~f~~a~~Gi~glet~lpll~~~~------------v~~g~lsl~~~v~~~s~nPAk 324 (334)
T d2ftwa2 257 RGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRMSIVWENG------------VNTGKLTWCQFVRATSSERAR 324 (334)
T ss_dssp HTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHHHHHHHHH------------TTTTSSCHHHHHHHHTHHHHH
T ss_pred CCCccceecCCCCCCHHHHhcCCCChhhCCCCccCHHHHHHHHHHHH------------HHcCCCCHHHHHHHHhHHHHH
Confidence 7988999999976411 1111111111111 234569999999999999999
Q ss_pred HcCCCCCccc
Q 015784 384 SVLWDNDIGS 393 (400)
Q Consensus 384 ~lg~~~~~G~ 393 (400)
+||+..++|+
T Consensus 325 i~gL~p~KGr 334 (334)
T d2ftwa2 325 IFNIYPRKGR 334 (334)
T ss_dssp HTTCTTTSSC
T ss_pred HhCCCCCCCC
Confidence 9999877784
|
| >d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: D-hydantoinase species: Bacillus sp. AR9 [TaxId: 301298]
Probab=99.63 E-value=6.7e-15 Score=130.51 Aligned_cols=182 Identities=15% Similarity=0.200 Sum_probs=102.0
Q ss_pred CCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh--hcCCCC--------C------hH-HH
Q 015784 204 ADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD--TRKVDH--------G------TV-TF 266 (400)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~--~~~~~~--------~------~~-~~ 266 (400)
+...++++.........+.+.+.++++.+++.+..+.+|+.+.......... ..+... - .+ +.
T Consensus 93 g~~~~k~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~h~Ed~~~~~~~~~~~~~~g~~~~~~~~~~~p~~aE~~ai~r~ 172 (332)
T d1ynya2 93 GITSLKVFMAYKNVFQADDETLFKTLVKAKELGALVQVHAENGDVLDYLTKKALAEGNTDPIYHAYTRPPEAEGEATGRA 172 (332)
T ss_dssp CCCEEEEESCSTTTTCCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTTCCSTTHHHHTSCHHHHHHHHHHH
T ss_pred cccceeeeeccccccccCHHHHHHHHHHHhhcCCEEeechhhHHHHHHHHHHHHhcCCCCchhccccchhhHHHHHHHHH
Confidence 3445666665555556688899999999999999999999654321111110 011000 0 11 11
Q ss_pred HhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC--CeEEECccccc--------------cccCccc---------HHHHH
Q 015784 267 LDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG--VKVSHCPASAM--------------RMLGFAP---------IKEML 320 (400)
Q Consensus 267 l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~--~~~~~~p~~~~--------------~~~~~~~---------~~~~~ 320 (400)
+......+.+..+.|..... -+.++.+++.| +.+.+||..-+ ++.-.+| +.+.+
T Consensus 173 ~~la~~~g~~~hi~hiSt~~~~~~i~~ak~~g~~vt~e~~ph~L~l~~~~~~~~~~~g~~~k~~PPLRs~~dr~aL~~al 252 (332)
T d1ynya2 173 IALTALAGSQLYVVHVSCASAVQRIAEAREKGWNVYGETCPQYLALDVSIMDQPDFEGAKYVWSPPLREKWNQEVLWSAL 252 (332)
T ss_dssp HHHHHHHTCCEEECSCCSHHHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGCCSSSGGGGGCCSSCCCCTTHHHHHHHHH
T ss_pred HHhhhhhcccccccccccchHHHHHHHHHHhCCCceeccccccccCCHHHHhhhhccCceeEecCccccHHHHHHHHHHH
Confidence 11112223344444443321 24466666776 45677776421 0111122 45567
Q ss_pred HcCCcEEEcCCCCCCCCC-------CCHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 321 HADICVSLGTDGAPSNNR-------MSIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 321 ~~Gv~v~~gtD~~~~~~~-------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
..|...+++|||.|.+.. .+++. +..+...+.. .+....+++++++++++.|||++|
T Consensus 253 ~~G~id~i~SDHaP~~~~~kk~~~~~~f~~a~~G~~g~e~~l~~~~~~--------~v~~g~lsl~~~v~~~s~nPAki~ 324 (332)
T d1ynya2 253 KNGILQTVGSDHCPFNFRGQKELGRGDFTKIPNGGPLIEDRLTILYSE--------GVRQGRISLNQFVDISSTKAAKLF 324 (332)
T ss_dssp HTTSSCEECCCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHHHHHHHH--------TTTTTSSCHHHHHHHHTHHHHHHT
T ss_pred hcCCeeEEEecCCCCCHHHHhhccCCCcccCCCccchHHHHHHHHHHH--------HHHcCCCCHHHHHHHHhHHHHHHh
Confidence 789999999999875210 01111 1111111111 123456999999999999999999
Q ss_pred CCCCCccc
Q 015784 386 LWDNDIGS 393 (400)
Q Consensus 386 g~~~~~G~ 393 (400)
|+.+++||
T Consensus 325 GL~p~KGt 332 (332)
T d1ynya2 325 GMFPRKGT 332 (332)
T ss_dssp TCTTTSSS
T ss_pred CCCCCCCC
Confidence 99988896
|
| >d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Uncharacterized protein EAJ56179 species: Unidentified organism [TaxId: 32644]
Probab=99.55 E-value=2.7e-15 Score=107.98 Aligned_cols=63 Identities=13% Similarity=0.307 Sum_probs=52.2
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcC
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVH 88 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H 88 (400)
+++|+|++|+++.+ ...+++.+|+|+||+|++|++.... ..+.++||++|++|||||||.|.|
T Consensus 2 ~~l~~n~~v~d~~~-~~~~~~~~I~I~~g~I~~i~~~~~~-----~~~~~vID~~G~~v~PGlid~h~~ 64 (102)
T d2r8ca1 2 TFLFRNGALLDPDH-PDLLQGFEILIEDGFIREVSDKPIK-----SSNAHVIDVKGKTIMPRIVPGAHA 64 (102)
T ss_dssp EEEEEEEEECCTTS-SSCEEEEEEEEESSBEEEEESSCCC-----CSSCEEEECTTCEEEESCCTTSBC
T ss_pred eEEEECeEEECCCC-CCcccCcEEEEECCEEEEccccCCC-----CCCCEEEeCCCCEEECceeeheee
Confidence 58999999998643 3456788999999999999986432 246799999999999999988764
|
| >d1ejxc1 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit of urease {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: alpha-Subunit of urease domain: alpha-Subunit of urease species: Klebsiella aerogenes [TaxId: 28451]
Probab=99.54 E-value=8e-15 Score=112.05 Aligned_cols=82 Identities=21% Similarity=0.202 Sum_probs=61.9
Q ss_pred CCCCCCCCCCCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhh-----hhccCCCcEEeCCCcEeee
Q 015784 6 SGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQ-----QFSQMADQIIDLQSQILLP 80 (400)
Q Consensus 6 ~~~~~~~~~~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~-----~~~~~~~~viD~~g~~v~P 80 (400)
.|++.++.+.....+++|+|+.|++.. . +.+++|.|+||||++||+...... .....++++||++|++|+|
T Consensus 52 dgmg~~~~~~~~~lDlvI~n~~Ivd~~---G-i~kaDIgIkdGrI~~IGkagnpd~~d~v~l~~g~~tevIdaeG~ivtp 127 (181)
T d1ejxc1 52 DGMGQGQMLAADCVDLVLTNALIVDHW---G-IVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTA 127 (181)
T ss_dssp BTTTBCCCCGGGSCSEEEEEEEEEETT---E-EEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEE
T ss_pred CCCCcCcccccccccEEEEccEEcCCC---C-cEEEEEEEeCCEEEEEecCCCccccCCceeeeccceEEecCCCcEEee
Confidence 445555444445669999999999854 2 367899999999999997542110 0123468999999999999
Q ss_pred cccccCcCCcc
Q 015784 81 GFVNTHVHTSQ 91 (400)
Q Consensus 81 G~iD~H~H~~~ 91 (400)
|+||.|+|+..
T Consensus 128 G~ID~HvHf~~ 138 (181)
T d1ejxc1 128 GSIEVGKLADL 138 (181)
T ss_dssp CSSCTTSBCCE
T ss_pred eeeecceEEee
Confidence 99999999976
|
| >d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenine deaminase-like domain: Putative adenine deaminase EF0837 species: Enterococcus faecalis [TaxId: 1351]
Probab=99.54 E-value=3.2e-14 Score=120.99 Aligned_cols=235 Identities=10% Similarity=-0.042 Sum_probs=117.4
Q ss_pred HHHHhcCcceeeccCc---CCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCCCCCe
Q 015784 132 IELIHSGVTCFAEAGG---QHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAADGRI 208 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (400)
+.++++||||+++++. ...+...+..+...............+..... .................+... +.+
T Consensus 22 ~~~l~~GvTTv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----~~~ 96 (267)
T d2icsa2 22 EIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIVAQD-ELADLSKVQASLVKKAIQELP----DFV 96 (267)
T ss_dssp HHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESSTTTTSSSC-TTSSGGGCCHHHHHHHHHHCT----TTE
T ss_pred HHHhCCeeEEEECCCCCChhHHHHHHHHHHhhhcchhhccccccccccccc-ccCChhhcCHHHHHHHHhhhh----hhh
Confidence 3478899999999763 33556666666666655433332222211111 111111111222333333322 233
Q ss_pred EEEee---cccccc-CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecC
Q 015784 209 RIWFG---IRQIMN-ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW 284 (400)
Q Consensus 209 ~~~~~---~~~~~~-~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~ 284 (400)
+.... ...... ...+........+...++++..|...................... ............+...
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 172 (267)
T d2icsa2 97 VGIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALMEKGDVLT----HCFNGKENGILDQATD 172 (267)
T ss_dssp EEEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHHHCCTTCEEE----STTCCSTTSSEETTTT
T ss_pred hhhhhhhcccccccCCcHHHHHHHHHHHHhcccceeeecccchhHHHHHHhhhhccchhH----HHhhhhcccccccccc
Confidence 33221 111122 233344444455666789999998876654443332221110000 0000000112222222
Q ss_pred CChhHHHHHHhcCCeEEECccccccccCcccHHHHHHcCCcEEEcCCCCCC----CCCCCHHHHHHHHHHHhcccccccC
Q 015784 285 VNHTEIGLLSRAGVKVSHCPASAMRMLGFAPIKEMLHADICVSLGTDGAPS----NNRMSIVDEMYLASLINKGREVFAN 360 (400)
Q Consensus 285 ~~~~~i~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~Gv~v~~gtD~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (400)
...+........+......+.+... ........+...++...+++|.... .+..++..+|+.+...
T Consensus 173 ~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--------- 242 (267)
T d2icsa2 173 KIKDFAWQAYNKGVVFDIGHGTDSF-NFHVAETALREGMKAASISTDIYIRNRENGPVYDLATTMEKLRVV--------- 242 (267)
T ss_dssp EECHHHHHHHHTTCEEECCCTTTSC-CHHHHHHHHHTTCCCSBCCCCBCHHHHHSSSCCCHHHHHHHHHHH---------
T ss_pred chHHHHHHHHhcCCeeeccCcchhh-hHHHHHHhhhhcccceeccceeecCCCCcchHHHHHHHHHHHHHc---------
Confidence 2345556666677766554432211 1111233344455666777776521 2345677888776533
Q ss_pred CCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 361 GTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 361 ~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
|+|+.|||+++|.|||++||+++| |
T Consensus 243 ------Gls~~eal~~aT~npA~~lgl~dr-G 267 (267)
T d2icsa2 243 ------GYDWPEIIEKVTKAPAENFHLTQK-G 267 (267)
T ss_dssp ------TCCHHHHHHTTTHHHHHHTTCTTS-S
T ss_pred ------CCCHHHHHHHHHHHHHHHhCCCCC-C
Confidence 499999999999999999999885 6
|
| >d1nfga1 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkholderia pickettii [TaxId: 329]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: D-hydantoinase species: Burkholderia pickettii [TaxId: 329]
Probab=99.52 E-value=1.2e-14 Score=108.07 Aligned_cols=62 Identities=23% Similarity=0.336 Sum_probs=53.1
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
++++|+|++|+++++ ..+++|+|+||+|++|++... .+.++||++|++|+||+||.|+|+..
T Consensus 1 mDllikn~~v~~~~~----~~~~di~I~dg~I~~ig~~~~-------~~~~~iDa~G~~v~Pg~i~~~~~~~i 62 (127)
T d1nfga1 1 MDIIIKNGTIVTADG----ISRADLGIKDGKITQIGGALG-------PAERTIDAAGRYVFPIAVGSDADIVL 62 (127)
T ss_dssp CCEEEEEEEEEETTE----EEEEEEEEETTEEEEESSCCC-------CCSEEEECTTCEEEECSTTSBCCEEE
T ss_pred CcEEEECCEEECCCC----CEEEEEEEECCEEEEeeCCCC-------CceEEEEeeceEEeeeccccccccee
Confidence 479999999998642 367899999999999998643 35799999999999999999999854
|
| >d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii [TaxId: 329]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: D-hydantoinase species: Burkholderia pickettii [TaxId: 329]
Probab=99.52 E-value=3.8e-13 Score=118.80 Aligned_cols=175 Identities=13% Similarity=0.089 Sum_probs=98.5
Q ss_pred cCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHh-h--hcC--------CCCC------hH
Q 015784 202 HAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVM-D--TRK--------VDHG------TV 264 (400)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~-~--~~~--------~~~~------~~ 264 (400)
..+...+++++........+...+.++++.+.+.+..+.+|+.+... ..... . .-+ .++- .+
T Consensus 90 ~~Gv~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~E~~~~-~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~av 168 (330)
T d1nfga2 90 DLGITSFKVFMAYRGMNMIDDVTLLKTLDKAVKTGSLVMVHAENGDA-ADYLRDKFVAEGKTAPIYHALSRPPRVEAEAT 168 (330)
T ss_dssp GGTCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECCCHHH-HHHHHHHHHHTTCCSTHHHHHTSCHHHHHHHH
T ss_pred hhcccceeeeccccccCCCCcHHHHHHHHHHHhcCCceeechHHHHH-HHHHhhhhhccCCcCchhcccccChHHHHHHH
Confidence 33334456655555555577888999999999999999999965322 11110 0 000 0000 11
Q ss_pred -HHHhHhCCCCCCeeeEEecCCCh----hHHHHHHhcCCe--EEECcccccc--------------ccCcc---------
Q 015784 265 -TFLDKIEFLQNNLLSAHTVWVNH----TEIGLLSRAGVK--VSHCPASAMR--------------MLGFA--------- 314 (400)
Q Consensus 265 -~~l~~~~~~~~~~~~~h~~~~~~----~~i~~~~~~~~~--~~~~p~~~~~--------------~~~~~--------- 314 (400)
+.+.-....+.+. |..|++. +.++++++.|.. +.+||..-+. +.-.+
T Consensus 169 ~r~~~la~~~~~~l---hi~HiSt~~~~~~i~~ak~~g~~vt~Et~ph~L~l~~~d~~~~~~~~~~~k~~PPLR~~~d~~ 245 (330)
T d1nfga2 169 ARALALAEIVNAPI---YIVHVTCEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFTPPARAKKDHD 245 (330)
T ss_dssp HHHHHHHHHHTCCE---EECCCCSHHHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTTGGGGGCCSSCCCCHHHHH
T ss_pred HHHHHHHHHhCCee---eechhcchHHHHHHHHHHhcCCcccccccchhhhhhhhhhhcccccCceeeecCcCCcHHHHH
Confidence 1111111223344 5555442 335556666654 5566653210 11112
Q ss_pred cHHHHHHcCCcEEEcCCCCCCCC-------------------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHH
Q 015784 315 PIKEMLHADICVSLGTDGAPSNN-------------------RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLR 375 (400)
Q Consensus 315 ~~~~~~~~Gv~v~~gtD~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~ 375 (400)
.+.+.+..|...+++|||.|... ++...-.+.+. .+ ...+++++++++
T Consensus 246 aL~~~l~dG~Id~i~SDHaP~~~~~~~~~~~~~f~~ap~G~~gle~~lp~l~~-~v------------~~~~l~l~~~v~ 312 (330)
T d1nfga2 246 VLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERLMMVYQ-GV------------NEGRISLTQFVE 312 (330)
T ss_dssp HHHHHHHTTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHHHHHHH-HH------------HTTSSCHHHHHH
T ss_pred HHhhhhcCCceeeecCCCCCccchhhHhhccCCHhHCCCCcCHHHHHHHHHHH-HH------------HcCCCCHHHHHH
Confidence 34456778999999999976421 11211111111 11 134599999999
Q ss_pred HHhHHHHHHcCCCCCccc
Q 015784 376 MATINGAKSVLWDNDIGS 393 (400)
Q Consensus 376 ~~T~~~A~~lg~~~~~G~ 393 (400)
+++.|||++||+.+++||
T Consensus 313 ~~S~nPAki~gL~p~KGt 330 (330)
T d1nfga2 313 LVATRPAKVFGMFPQKGT 330 (330)
T ss_dssp HHTHHHHHHTTCTTTSSS
T ss_pred HHHHHHHHHhCCCCCCCC
Confidence 999999999999888896
|
| >d2qs8a1 b.92.1.9 (A:7-63,A:374-412) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Xaa-Pro dipeptidase species: Alteromonas macleodii [TaxId: 28108]
Probab=99.50 E-value=1.1e-14 Score=102.84 Aligned_cols=67 Identities=16% Similarity=0.234 Sum_probs=55.1
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~ 90 (400)
++++|+|++|+++.+. .++++.+|+|++|+|++|++.... +.+..++||++|++|||||+|.|+|..
T Consensus 1 sktlI~~g~liDg~~~-~~~~~~~I~I~~~~I~~V~~~~~~----~~~~~~vID~~G~~v~PGL~~g~~~d~ 67 (96)
T d2qs8a1 1 SKTLIHAGKLIDGKSD-QVQSRISIVIDGNIISDIKKGFIS----SNDFEDYIDLRDHTVLPSIESGKLADL 67 (96)
T ss_dssp CCEEEEEEEECCSSCS-SCEEEEEEEEETTEEEEEEESCCC----CTTSSEEEEEEEEEEEESCCTTSBCCE
T ss_pred CeEEEECeEEEECCCC-ccccCceEEEECCEEEEEcccccC----CCCCCEEEECCCCEeccCccccCcccE
Confidence 3689999999986543 467889999999999999975321 234679999999999999999999953
|
| >d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Dihydropyrimidine amidohydrolase Pyd2 species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]
Probab=99.49 E-value=1.2e-13 Score=124.03 Aligned_cols=26 Identities=19% Similarity=0.078 Sum_probs=24.0
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCccc
Q 015784 368 LPAETVLRMATINGAKSVLWDNDIGS 393 (400)
Q Consensus 368 l~~~~al~~~T~~~A~~lg~~~~~G~ 393 (400)
+++++++++++.|||++||+..++|+
T Consensus 359 ~sl~~lv~~~s~nPAki~Gl~p~KGs 384 (384)
T d2fvka2 359 TSMMKLVEIQCTNPAKVYGMYPQKGS 384 (384)
T ss_dssp SCHHHHHHHHTHHHHHHTTCTTTSSS
T ss_pred CCHHHHHHHHhHHHHHHhCCCCCCCC
Confidence 58999999999999999999877885
|
| >d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: D-hydantoinase species: Bacillus sp. AR9 [TaxId: 301298]
Probab=99.48 E-value=2.4e-14 Score=106.86 Aligned_cols=62 Identities=18% Similarity=0.260 Sum_probs=51.2
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
++||+|++|+++++ ...++|+|+||+|++|++..+. .+.++||++|++|+||+||.|+|+..
T Consensus 1 k~likn~~i~~~~~----~~~~di~I~~g~I~~ig~~~~~------~~~~viDa~g~~v~Pg~i~~~~~~~i 62 (127)
T d1ynya1 1 KKWIRGGTVVTAAD----TYQADVLIEGERVVAIGHQLSV------NGAEEIDATGCYVIPIAVGSDADIVI 62 (127)
T ss_dssp CEEEESCEEECSSC----EEECEEEEETTEEEEEECC----------CCEEEECTTSEEEECSTTSBCCEEE
T ss_pred CEEEECcEEECCCC----CEEEeEEEECCEEEEecCCCCC------CCCEEEEhhhceeecccccccchhhh
Confidence 47999999998642 2568999999999999987552 35699999999999999999999864
|
| >d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE) {Pseudomonas diminuta [TaxId: 293]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Phosphotriesterase-like domain: Phosphotriesterase (parathion hydrolase, PTE) species: Pseudomonas diminuta [TaxId: 293]
Probab=99.46 E-value=1.9e-11 Score=108.22 Aligned_cols=272 Identities=14% Similarity=0.100 Sum_probs=147.6
Q ss_pred cccccCcCCcccccccccCCCChhHhhhhccccccCCCChhhHHHHHHHHHHHHHhcCcceeeccC----cCCHHHHHHH
Q 015784 81 GFVNTHVHTSQQLAKGIADDVDLMTWLHDRIWPYESNMTEEDSYISTLLCGIELIHSGVTCFAEAG----GQHVSEMAKA 156 (400)
Q Consensus 81 G~iD~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTt~~~~~----~~~~~~~~~~ 156 (400)
||||+|+|+......... .++... -+.+.....+...+.++.++|+|++.++. +...+.+.+.
T Consensus 16 G~~d~H~Hl~~~~~~~~~------------~~~~~~-~~~~~~~e~~~~~l~~a~~~GvttvVd~~~~~~~~d~~~l~~~ 82 (331)
T d1i0da_ 16 GFTLTHEHICGSSAGFLR------------AWPEFF-GSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEV 82 (331)
T ss_dssp CSEEEEECSEECCTTHHH------------HCGGGG-SCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHH
T ss_pred CCEeeeeCcccCcccccc------------cCcccc-ccHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCCcCCHHHHHHH
Confidence 999999999762211100 000000 01122333444456778899999999874 2446677788
Q ss_pred HHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhcc-CC--CCCeEEEeeccccccCCHHHHHHHHHHHH
Q 015784 157 VELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHH-AA--DGRIRIWFGIRQIMNATDRLLLETRDMAR 233 (400)
Q Consensus 157 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~e~l~~~~~~a~ 233 (400)
+++.+.+.....+++... +........................ .+ ....+... .........+.++..++.++
T Consensus 83 ~~~~~~~~~~~~g~h~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~a~ 158 (331)
T d1i0da_ 83 SRAADVHIVAATGLWFDP---PLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVAT-TGKATPFQELVLKAAARASL 158 (331)
T ss_dssp HHHHTCEEECEEECCSCC---CHHHHTCCHHHHHHHHHHHHHTCBTTTTBCCSEEEEEC-SSSCCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEEEecCc---CcccCccCHHHHHHHHHHhhhhhhccccCccceeeccc-cccccHHHHHHHHHHHHHHH
Confidence 888888776555444221 1111111222222222221221111 11 11111111 11111122346778888999
Q ss_pred HcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecC-CChhHHHHHHhcCCeEEE--Cccccccc
Q 015784 234 EFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVW-VNHTEIGLLSRAGVKVSH--CPASAMRM 310 (400)
Q Consensus 234 ~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~-~~~~~i~~~~~~~~~~~~--~p~~~~~~ 310 (400)
+.|.++.+|+......... ..+.+...+.......+.|+.. -..+.++++++.|..+.. +|......
T Consensus 159 ~~g~pv~~h~~~~~~~~~~----------~~~~~~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~ 228 (331)
T d1i0da_ 159 ATGVPVTTHTAASQRDGEQ----------QAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSAIGL 228 (331)
T ss_dssp HHCCCEEEECCGGGTHHHH----------HHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHHTTCEEEECCTTCCCTTC
T ss_pred HhCCeEEeeccchhhhhhh----------hhhhhhhcccCCcceEEEecCCcchHHHHHHHHhcCCceeecceeeeccch
Confidence 9999999998765543221 2344555666666777888874 345677888888877543 33321100
Q ss_pred -----------c-----CcccHHHHHHcCC--cEEEcCCCCCCCCCCC--HHHH------------HHHHHHHhcccccc
Q 015784 311 -----------L-----GFAPIKEMLHADI--CVSLGTDGAPSNNRMS--IVDE------------MYLASLINKGREVF 358 (400)
Q Consensus 311 -----------~-----~~~~~~~~~~~Gv--~v~~gtD~~~~~~~~~--~~~~------------~~~~~~~~~~~~~~ 358 (400)
. ....+++++++|. ++.+|||++...+... --.. +.......
T Consensus 229 ~~~~~~~~~~~~~~~~~r~~~~~~~l~~g~~d~i~~~tD~p~~~p~~~~~~~~~~~~~g~~g~~~~l~~~~~~~------ 302 (331)
T d1i0da_ 229 EDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWLFGFSSYVTNIMDVMDRVNPDGMAFIPLRVIPFL------ 302 (331)
T ss_dssp TTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSEECSSSTTHHHHHHHHCTTGGGHHHHTHHHHH------
T ss_pred hhhccccCCccCCChhhhHHHHHHHHHhcCCCCEEECCCCCCcccccccCCCccccccCCCcHHHHHHHHHHHH------
Confidence 0 0113466888886 5789999974311110 0000 11111111
Q ss_pred cCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCC
Q 015784 359 ANGTTDPAALPAETVLRMATINGAKSVLWDND 390 (400)
Q Consensus 359 ~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~ 390 (400)
...|+|++++.++.|.||||+||++.|
T Consensus 303 -----~~~gis~e~i~~i~~~NParlf~l~~k 329 (331)
T d1i0da_ 303 -----REKGVPQETLAGITVTNPARFLSPTLR 329 (331)
T ss_dssp -----HHTTCCHHHHHHHHTHHHHHHHSCCCC
T ss_pred -----HHcCCCHHHHHHHHHHHHHHHcCCCCC
Confidence 134699999999999999999999876
|
| >d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: Dihydropyrimidine amidohydrolase Pyd2 species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]
Probab=99.44 E-value=4.4e-14 Score=110.43 Aligned_cols=65 Identities=20% Similarity=0.374 Sum_probs=54.6
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEe---eecccccCcCCcc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQIL---LPGFVNTHVHTSQ 91 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v---~PG~iD~H~H~~~ 91 (400)
|.+++|+|++|+|+++ ..+.+|+|+||+|++|++.... ..+.++||++|++| +|||||+|+|+..
T Consensus 2 m~dllikn~~v~~~~~----~~~~di~i~~g~I~~ig~~~~~-----~~~~~viDa~G~~V~p~~pg~~d~Hih~~~ 69 (156)
T d2fvka1 2 IYDLIIKNGIICTASD----IYAAEIAVNNGKVQLIAASIDP-----SLGSEVIDAEGAFITPILPGVSDADLVIWY 69 (156)
T ss_dssp CEEEEEESCEEECSSC----EEECEEEEETTEEEEEESCCCG-----GGEEEEEECTTCEEEECCTTTSBCCEEEEC
T ss_pred CccEEEECCEEECCCC----CEEEEEEEECCEEEEecCCCCC-----CCCCEEEECCCCEEeeecccccccceEEEe
Confidence 6799999999998652 3578999999999999986542 23579999999998 6999999999865
|
| >d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=99.43 E-value=4e-13 Score=116.27 Aligned_cols=67 Identities=13% Similarity=0.108 Sum_probs=55.1
Q ss_pred cCcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCC
Q 015784 311 LGFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDND 390 (400)
Q Consensus 311 ~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~ 390 (400)
....+...+.++|+.+.+|||..+. +..+++.+|+.+.... +||++|||+++|.|||++||++++
T Consensus 231 ~~~~~~~~~~~~g~~~~~gtd~~~g-~~~~l~~~~~~~v~~~--------------gls~~~al~~aT~n~A~~LGldd~ 295 (297)
T d1yrra2 231 QFIFAGKTIYYRNGLCVDENGTLSG-SSLTMIEGVRNLVEHC--------------GIALDEVLRMATLYPARAIGVEKR 295 (297)
T ss_dssp EEEETTEEEEECSSCEECTTCCEEE-BCCCHHHHHHHHHHHH--------------CCCHHHHHHHHTHHHHHHTTCTTT
T ss_pred cccCCcceEEEeCCEEEecCCCCcc-chhhHHHHHHHHHHHh--------------CCCHHHHHHHHHHHHHHHhCCCcC
Confidence 3455778888999999999998754 3467888887765332 499999999999999999999999
Q ss_pred cc
Q 015784 391 IG 392 (400)
Q Consensus 391 ~G 392 (400)
+|
T Consensus 296 iG 297 (297)
T d1yrra2 296 LG 297 (297)
T ss_dssp SS
T ss_pred cC
Confidence 87
|
| >d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: L-hydantoinase species: Arthrobacter aurescens [TaxId: 43663]
Probab=99.42 E-value=1.4e-12 Score=115.08 Aligned_cols=164 Identities=15% Similarity=0.064 Sum_probs=88.3
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCC----------h-HH------HHhHhCCCCCCeeeE
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG----------T-VT------FLDKIEFLQNNLLSA 280 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~----------~-~~------~l~~~~~~~~~~~~~ 280 (400)
...++..+.++++.+++.+..+.+|+.+..............+.. . .| .+......+.+ .
T Consensus 105 ~~~~d~~l~~~~~~~~~~~~~~~~H~E~~~l~~~~~~~~~~~g~~~~~~~~~~rp~~aE~~~v~r~~~la~~~~~~---~ 181 (325)
T d1gkra2 105 DAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAGGKDMAAYEASQPVFQENEAIQRALLLQKEAGCR---L 181 (325)
T ss_dssp CBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTTCCSHHHHHHHSCHHHHHHHHHHHHHHHHHHCCE---E
T ss_pred ccccHHHHHHHHHHHHhcCCceEeccCcHHHHHHHHHHhhhcCCcccccccccCchHHHHHHHHHHHHHhhhcCcc---e
Confidence 345677889999999999999999986543221111110000000 0 01 11111111222 4
Q ss_pred EecCCCh----hHHHHHHhcCC--eEEECccccc-----------ccc---------CcccHHHHHHcCCcEEEcCCCCC
Q 015784 281 HTVWVNH----TEIGLLSRAGV--KVSHCPASAM-----------RML---------GFAPIKEMLHADICVSLGTDGAP 334 (400)
Q Consensus 281 h~~~~~~----~~i~~~~~~~~--~~~~~p~~~~-----------~~~---------~~~~~~~~~~~Gv~v~~gtD~~~ 334 (400)
|..+++. +.++.+++.|. .+.+||.... ... ....+.+.+..|...+++|||.|
T Consensus 182 hi~hiSs~~~l~~i~~ak~~g~~vt~et~ph~L~lt~~~~~~~~~~~k~~PPlR~~~Dr~aL~~al~~G~id~i~SDHaP 261 (325)
T d1gkra2 182 IVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGSDHGG 261 (325)
T ss_dssp EECCCCSHHHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHHHHTCCCEECCCEEC
T ss_pred eccccccHHHHHhhhhhhhcCCceEEeecccccccchhhhhccCcccccchhhhhhhhhHHHHHHHhcCcceEEecCCCC
Confidence 6666543 33555566665 4677776321 011 11234456777999999999965
Q ss_pred CCCC------CCHHH--------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 335 SNNR------MSIVD--------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 335 ~~~~------~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
.... .+++. +-.+...+... .....++++++++.+|.|||++||+..++|
T Consensus 262 h~~~~K~~~~~~~~~a~~G~~g~e~~lp~~~~~~--------v~~g~lsl~~~v~~~s~nPAki~gl~p~KG 325 (325)
T d1gkra2 262 HPVEDKEPGWKDVWKAGNGALGLETSLPMMLTNG--------VNKGRLSLERLVEVMCEKPAKLFGIYPQKG 325 (325)
T ss_dssp CCGGGTGGGGTCGGGSCCCBCCTTTHHHHHHHHT--------GGGTSSCHHHHHHHHTHHHHHHHTCTTTSS
T ss_pred CCHHHhccCCCccccCCCCcccHHHHHHHHHHHH--------HHcCCCCHHHHHHHHhHHHHHHhCCCCCCC
Confidence 4210 01110 00111111100 123459999999999999999999987776
|
| >d1k1da1 b.92.1.3 (A:1-52,A:385-460) D-hydantoinase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: D-hydantoinase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.41 E-value=1.4e-13 Score=102.67 Aligned_cols=63 Identities=22% Similarity=0.358 Sum_probs=52.2
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCcc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTSQ 91 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~~ 91 (400)
++++|+|++|+++++ . .+++|+|+||+|++|++..+ ..+.++||++|++|+||+||.|+|+..
T Consensus 1 M~~likn~~v~~~~~---~-~~~Di~I~~g~I~~Ig~~~~------~~~~~vida~g~~v~P~~v~~~~~~~~ 63 (128)
T d1k1da1 1 MTKIIKNGTIVTATD---T-YEAHLLIKDGKIAMIGQNLE------EKGAEVIDAKGCYVFPIVVGSDADLVI 63 (128)
T ss_dssp CCEEEEEEEEECSSC---E-EEEEEEECSSBEEEEESSCC------CSSCCCEECTTCEEEECSTTSBCCEEE
T ss_pred CCEEEECcEEECCCC---C-EEeeEEEECCEEEEEcCCCC------CCceEEeeeCCCeEeeeecccccceEE
Confidence 468999999998642 2 46799999999999998654 245799999999999999988888753
|
| >d1m7ja1 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: D-aminoacylase domain: N-acyl-D-aminoacid amidohydrolase species: Alcaligenes faecalis [TaxId: 511]
Probab=99.35 E-value=1e-12 Score=82.09 Aligned_cols=55 Identities=25% Similarity=0.309 Sum_probs=45.9
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeee
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLP 80 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~P 80 (400)
+.+++|+|++|+++.+. ...+++|+|+||+|++|++... ..+.++||++|++|+|
T Consensus 1 P~DllIkn~~i~d~~~~--~~~~~di~I~~g~I~~Ig~~~~------~~~~~vIDa~G~~v~P 55 (55)
T d1m7ja1 1 PFDYILSGGTVIDGTNA--PGRLADVGVRGDRIAAVGDLSA------SSARRRIDVAGKVVSP 55 (55)
T ss_dssp CBSEEEESSEECCSSSC--CCEECEEEEETTEEEEEECCTT------SCBSCEEECTTCEEEE
T ss_pred CCcEEEECCEEECCCCC--ceeEEEEEEECCEEEEEccCCC------CCCCEEEECCCCEECC
Confidence 46899999999986543 3467899999999999998543 2367999999999999
|
| >d1gkra1 b.92.1.3 (A:1-54,A:380-451) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: L-hydantoinase species: Arthrobacter aurescens [TaxId: 43663]
Probab=99.33 E-value=8e-13 Score=98.11 Aligned_cols=65 Identities=17% Similarity=0.293 Sum_probs=53.9
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecc---cccCcCCcc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGF---VNTHVHTSQ 91 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~---iD~H~H~~~ 91 (400)
|.+++|+|++|++.+ ....++|+|+||+|++|++..+. ..+.++||++|++|+||+ .|+|.|+..
T Consensus 1 M~dllIkn~~iv~~~----~~~~~Di~I~dgkI~~i~~~~~~-----~~a~~~iDa~g~~v~P~~~vG~DAD~~l~D 68 (126)
T d1gkra1 1 MFDVIVKNCRLVSSD----GITEADILVKDGKVAAISADTSD-----VEASRTIDAGGKFVMPTLQVGSDADLLILD 68 (126)
T ss_dssp CEEEEEEEEEEEETT----EEEEEEEEEETTEEEEEESCCTT-----CCEEEEEECTTCEEEESCCTTSBCCEEEEE
T ss_pred CccEEEECcEEECCC----CCEEEeEEEECCEEEEEcCcCCc-----ccceEEeehhhcccccceeecccchhheec
Confidence 468999999999854 23567999999999999986442 235689999999999998 999999864
|
| >d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase), catalytic domain domain: Two-domain dihydroorotase species: Aquifex aeolicus [TaxId: 63363]
Probab=99.33 E-value=2e-11 Score=106.99 Aligned_cols=161 Identities=13% Similarity=0.057 Sum_probs=85.6
Q ss_pred cccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhh------hcCCCC---C---hH-HHHhHhCCCCCCeeeEEec
Q 015784 217 IMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMD------TRKVDH---G---TV-TFLDKIEFLQNNLLSAHTV 283 (400)
Q Consensus 217 ~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~------~~~~~~---~---~~-~~l~~~~~~~~~~~~~h~~ 283 (400)
....+.+.+.++++.+.+.+..+.+|+.+.........+ .+...+ . .+ +.+......+.+..+.|..
T Consensus 100 ~~~~d~~~l~~~~~~~~~~~~~~~~h~e~~~~~~~~~~~~~~~~~~~~~~rp~~~E~~ai~r~~~la~~~~~~~~i~HiS 179 (310)
T d1xrta2 100 SPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVINEGEVSALLGLSSRAPEAEEIQIARDGILAQRTGGHVHIQHVS 179 (310)
T ss_dssp SCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC--------------------CHHHHHHHHHHHHHHHCCEEEESCCC
T ss_pred CCccCHHHHHHHHHHhhhhhhhhhhccchhhhhhhhhhhhhcccccCccccchHHHHHHHHHHHHHHhhcCCeeeccccc
Confidence 345678899999999999999999998653321111110 000000 0 00 1111222233344444443
Q ss_pred CCC-hhHHHHHHhcC--CeEEECcccccc-------------------c-cCcccHHHHHHcCCcEEEcCCCCCCCCCCC
Q 015784 284 WVN-HTEIGLLSRAG--VKVSHCPASAMR-------------------M-LGFAPIKEMLHADICVSLGTDGAPSNNRMS 340 (400)
Q Consensus 284 ~~~-~~~i~~~~~~~--~~~~~~p~~~~~-------------------~-~~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~ 340 (400)
... -+.++.+++.| +.+.+||..-.. . ..+..+.+.+..|....++|||.|....-.
T Consensus 180 t~~~l~~i~~a~~~g~~vt~e~~ph~L~l~~~~~~~~~~~~k~~PplR~~~d~~aL~~al~~G~id~i~SDHaPh~~~~K 259 (310)
T d1xrta2 180 TKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEK 259 (310)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEECGGGGC----------------------CCHHHHHHHHHHTCSCEECCCBCCCCC---
T ss_pred hHHHHHHHHHHHHcCCceecchHHHHhhccccccccccchhhhcccCCCHHHHHHHHHHHhcCCCeEEecCCCCCCHHHc
Confidence 321 13355555666 446788875321 0 111234455678988899999986521000
Q ss_pred --HHH----------HHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 341 --IVD----------EMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 341 --~~~----------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
++. .+-..... ....+++++++++..+.|||+++|++
T Consensus 260 ~~~~~~~~G~~g~e~~lp~l~~~-----------v~~g~l~l~~~v~~~s~npAki~gL~ 308 (310)
T d1xrta2 260 ELVEFAMPGIIGLQTALPSALEL-----------YRKGIISLKKLIEMFTINPARIIGVD 308 (310)
T ss_dssp --------CCCCGGGHHHHHHHH-----------HHTTSSCHHHHHHHHTHHHHHHHTCS
T ss_pred cCcccCCCCceeHHHHHHHHHHH-----------HHcCCCCHHHHHHHHHHHHHHHhCCC
Confidence 000 01111111 12345999999999999999999994
|
| >d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenosine/AMP deaminase domain: Adenosine deaminase (ADA) species: Plasmodium yoelii [TaxId: 5861]
Probab=99.30 E-value=5.5e-11 Score=105.81 Aligned_cols=137 Identities=16% Similarity=0.155 Sum_probs=97.3
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCCeEE
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVS 301 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~~~~ 301 (400)
....+++.|++.|+++.+|+.|..... +.-........++. ..+.|+..+ +++.+++++++++.+.
T Consensus 202 ~~~~~f~~ar~~gl~it~HaGE~~~~~-----------~~~~i~~ai~~l~~-~RIgHGv~~~~d~~l~~~l~~~~I~le 269 (357)
T d2amxa1 202 DHKDVYHSVRDHGLHLTVHAGEDATLP-----------NLNTLYTAINILNV-ERIGHGIRVSESDELIELVKKKDILLE 269 (357)
T ss_dssp GGHHHHHHHHHTTCEEEEEESCCTTCS-----------SSHHHHHHHHTSCC-SEEEECGGGGGCHHHHHHHHHHTCEEE
T ss_pred hhHHHHHHHHhcCCcccccccccCCCC-----------ChHHHHHHHHccCC-cccccchheecCHHHHHHHHHhCceEE
Confidence 366788999999999999998854210 01122222333333 357999987 6788999999999999
Q ss_pred ECcccccccc-----CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 015784 302 HCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (400)
Q Consensus 302 ~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~ 376 (400)
+||.||+.+. ...|+++|+++|++|+++||.+... +.++..++..+.... ++|.+|. ..
T Consensus 270 iCPtSN~~~~~~~~~~~HP~~~l~~~Gv~v~l~TDDp~~f-~t~ls~ey~~~~~~~--------------~ls~~el-~~ 333 (357)
T d2amxa1 270 VCPISNLLLNNVKSMDTHPIRKLYDAGVKVSVNSDDPGMF-LSNINDNYEKLYIHL--------------NFTLEEF-MI 333 (357)
T ss_dssp ECHHHHHHTTSSSCSTTCTHHHHHHTTCEEEECCBCHHHH-TCCHHHHHHHHHHHH--------------CCCHHHH-HH
T ss_pred ECCcchhhhccCCCcccCHHHHHHHCCCeEEEeCCCchhh-CCCHHHHHHHHHHHc--------------CCCHHHH-HH
Confidence 9999998652 2359999999999999999987431 234777776655433 4899884 44
Q ss_pred HhHHHHHHcCCC
Q 015784 377 ATINGAKSVLWD 388 (400)
Q Consensus 377 ~T~~~A~~lg~~ 388 (400)
.+.|+-+..-++
T Consensus 334 l~~nsi~~sF~~ 345 (357)
T d2amxa1 334 MNNWAFEKSFVS 345 (357)
T ss_dssp HHHHHHHHCCSC
T ss_pred HHHHHHHHhCCC
Confidence 666776655444
|
| >d1gkpa1 b.92.1.3 (A:2-54,A:390-459) D-hydantoinase {Thermus sp. [TaxId: 275]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: D-hydantoinase species: Thermus sp. [TaxId: 275]
Probab=99.28 E-value=9e-13 Score=97.05 Aligned_cols=61 Identities=20% Similarity=0.359 Sum_probs=49.8
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCc
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~ 90 (400)
++|+|++|++.+ ...+++|+|+||+|++|+++.+. +.+.++||++|++|+||..+.|.|..
T Consensus 2 llIkng~iv~~~----~~~~~Di~I~~gkI~~Ig~~l~~-----~~~~~viDa~G~~v~~g~d~~~~d~~ 62 (123)
T d1gkpa1 2 LLIKNGEIITAD----SRYKADIYAEGETITRIGQNLEA-----PPGTEVIDATGKYVFPGADLVVYDPQ 62 (123)
T ss_dssp EEEESCEEEETT----EEEECEEEESSSBCCEEESCCCC-----CTTCEEEECTTSEEEECCCEEEEETT
T ss_pred EEEECcEEECCC----CCEEeeEEEECCEEEEeecCCCC-----CcchhhhhhccceEecCcceEEEecc
Confidence 799999999854 23678999999999999987543 23679999999999999976666654
|
| >d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Bacillus pasteurii [TaxId: 1474]
Probab=99.27 E-value=5.4e-11 Score=99.88 Aligned_cols=228 Identities=18% Similarity=0.183 Sum_probs=128.5
Q ss_pred HHHHhcCcceeeccCc---------------CCHHHHHHHHHHcCCeEEE-ecccccCCCCCCcccccCCchHHHHHHHH
Q 015784 132 IELIHSGVTCFAEAGG---------------QHVSEMAKAVELLGLRACL-VQSTMDCGEGLPASWAVRTTDDCIQSQKE 195 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~---------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
+.+|.+|+||+.-.+. .++..++++.....+..-+ +.+. . +. .....+
T Consensus 16 ~~al~sGiTT~~GgGtGpa~gt~att~tpG~~~i~~ml~a~d~~P~N~g~~gkGn-~------------s~---~~~l~e 79 (390)
T d4ubpc2 16 DVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPINVGILGKGH-G------------SS---IAPIME 79 (390)
T ss_dssp HHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSSEEEEEEECC-C------------SS---HHHHHH
T ss_pred HHHHhcCCeeeecCccCCCCCCCCcccCCCHHHHHHHHHhhhhCCcceeeeeccc-c------------CC---hHHHHH
Confidence 4589999999986431 2355677888777776533 2211 0 01 112222
Q ss_pred HHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHHhHhCCCC
Q 015784 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDKIEFLQ 274 (400)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~ 274 (400)
.++ . +.+. +..|..+..++..+...+..|.+++++|.+|.+.-.+ -. .+ +.+...+
T Consensus 80 qi~---a---Ga~G--lKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlNE-~g-----------fve~T~~a~~--- 136 (390)
T d4ubpc2 80 QID---A---GAAG--LKIHEDWGATPASIDRSLTVADEADVQVAIHSDTLNE-AG-----------FLEDTLRAIN--- 136 (390)
T ss_dssp HHH---H---TCCE--EEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTCS-SC-----------CHHHHHHHHT---
T ss_pred HHH---h---hhhe--eecccccccCHHHHHHHHHHhhccCceEEEecCCccc-ce-----------ehhhHHHHhC---
Confidence 222 1 2222 4567788889999999999999999999999753211 11 11 1222221
Q ss_pred CCeeeEEecCCC-------hhHHHHHHhcCCeEE-ECccc----c-----------------------------ccccCc
Q 015784 275 NNLLSAHTVWVN-------HTEIGLLSRAGVKVS-HCPAS----A-----------------------------MRMLGF 313 (400)
Q Consensus 275 ~~~~~~h~~~~~-------~~~i~~~~~~~~~~~-~~p~~----~-----------------------------~~~~~~ 313 (400)
.| ..|..|.. ++-++.....++..+ ..|.. | .|.+.+
T Consensus 137 gR--tiH~~HtEGaGGGHaPDii~~~g~~nvLpsSTnPT~Pyt~nt~~EhldM~MvcHhL~~~ipeDvafAesRiR~eTi 214 (390)
T d4ubpc2 137 GR--VIHSFHVEGAGGGHAPDIMAMAGHPNVLPSSTNPTRPFTVNTIDEHLDMLMVCHHLKQNIPEDVAFADSRIRPETI 214 (390)
T ss_dssp TC--CEEETTTTSTTSSSTTTGGGGGGSTTEEEBCCSTTSSCBTTHHHHHHHHHHHHHTCCTTSHHHHHHHHHHSCHHHH
T ss_pred Cc--eeecccCCCCCCCCCchhHHhcCCCcccCCCCCCCCCCccCchhhhcCeEEeeccCCCCChhhHHHHhhcccchhh
Confidence 11 23544431 333333333343322 12210 0 011222
Q ss_pred ccHHHHHHcCCcEEEcCCCCCCCCCCC-HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 314 APIKEMLHADICVSLGTDGAPSNNRMS-IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 314 ~~~~~~~~~Gv~v~~gtD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
+.-..|+|-|+.-.++||+...+.-.. ..+.++.+-.+.+.+..+..........-....+..+|+|||.+.|+++.+|
T Consensus 215 aAEdvLHD~GaiSi~sSDsQaMGRvgEvi~Rtwq~A~kmk~qrG~l~~d~~~~DN~RvkRYiAKyTINPAIahGish~VG 294 (390)
T d4ubpc2 215 AAEDILHDLGIISMMSTDALAMGRAGEMVLRTWQTADKMKKQRGPLAEEKNGSDNFRLKRYVSKYTINPAIAQGIAHEVG 294 (390)
T ss_dssp HHHHHHHHTTSSCBCCCCBTTSSCTTCHHHHHHHHHHHHHHHHCSCTTCCSSCCHHHHHHHHHTTTHHHHHHHTCTTTSS
T ss_pred hhHHHhhhcCceeeeccCcccccccchHHHhHHHHHHHHHHhccCCCCccccCCCchhhhcccccccChhHhcCcccccC
Confidence 334558899999999999876544344 3455555444432222111111111123355667788999999999999999
Q ss_pred ccccCcCC
Q 015784 393 SLEAGKKV 400 (400)
Q Consensus 393 ~i~~G~~A 400 (400)
|||+||.|
T Consensus 295 SvE~GKlA 302 (390)
T d4ubpc2 295 SIEEGKFA 302 (390)
T ss_dssp SCCTTSBC
T ss_pred cccCCccc
Confidence 99999987
|
| >d1onwa2 c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Isoaspartyl dipeptidase, catalytic domain domain: Isoaspartyl dipeptidase, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=99.24 E-value=2.3e-10 Score=98.24 Aligned_cols=25 Identities=20% Similarity=0.124 Sum_probs=23.1
Q ss_pred CCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 367 ALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 367 ~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
++|++++|+++|.|||++||+++| |
T Consensus 260 gls~~~al~~aT~npAr~lGL~~k-G 284 (284)
T d1onwa2 260 DFSISDALRPLTSSVAGFLNLTGK-G 284 (284)
T ss_dssp CCCHHHHHGGGTHHHHHHTTCTTC-S
T ss_pred CCCHHHHHHHHHHHHHHHhCCCCC-C
Confidence 599999999999999999999874 6
|
| >d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Helicobacter pylori [TaxId: 210]
Probab=99.23 E-value=1.3e-10 Score=97.42 Aligned_cols=228 Identities=18% Similarity=0.176 Sum_probs=129.8
Q ss_pred HHHHhcCcceeeccCc---------------CCHHHHHHHHHHcCCeEEE-ecccccCCCCCCcccccCCchHHHHHHHH
Q 015784 132 IELIHSGVTCFAEAGG---------------QHVSEMAKAVELLGLRACL-VQSTMDCGEGLPASWAVRTTDDCIQSQKE 195 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~---------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
+.+|.+|+||+.-.+. .++..++++.....+..-+ +.+.- +.. ....+
T Consensus 15 ~~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~i~~ml~a~d~~P~N~g~~gkGn~-------------s~~---~~l~e 78 (389)
T d1e9yb2 15 PTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNLGFLAKGNA-------------SND---ASLAD 78 (389)
T ss_dssp HHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEEEEEEECCC-------------SCH---HHHHH
T ss_pred HHHHhcCCeEEecCccCCCCCCCccccCCChhHHHHHHHhhhcCCcceeeeeccCC-------------CCh---HHHHH
Confidence 4589999999986432 2345677777777776533 21110 011 11222
Q ss_pred HHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHHhHhCCCC
Q 015784 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDKIEFLQ 274 (400)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~ 274 (400)
.+ .. +.+. +..|..+..++..+...+..|.++++++.+|.+.-.+ -. .+ ..+...+
T Consensus 79 qi---~a---Ga~G--lKiHEDwGatp~~Id~~L~vad~~dvqv~iHtDtlNE-~G-----------fve~T~~a~~--- 135 (389)
T d1e9yb2 79 QI---EA---GAIG--FKIHEDWGTTPSAINHALDVADKYDVQVAIHTDTLNE-AG-----------CVEDTMAAIA--- 135 (389)
T ss_dssp HH---HT---TCSE--EEECGGGCCCHHHHHHHHHHHHHTTCEEEECCCTTCS-SC-----------CHHHHHHHHT---
T ss_pred HH---Hh---ccce--eeccccccCCHHHHHHHHHHHHhhCceEEecCCCccc-cc-----------chhhHHHHhC---
Confidence 22 22 2222 5668888999999999999999999999999853221 11 12 1222222
Q ss_pred CCeeeEEecCC-------ChhHHHHHHhcCCeEEEC-ccc----c-----------------------------ccccCc
Q 015784 275 NNLLSAHTVWV-------NHTEIGLLSRAGVKVSHC-PAS----A-----------------------------MRMLGF 313 (400)
Q Consensus 275 ~~~~~~h~~~~-------~~~~i~~~~~~~~~~~~~-p~~----~-----------------------------~~~~~~ 313 (400)
.| ..|..|. .++-|+.....++..+.+ |.- | .|.+.+
T Consensus 136 gR--tiH~~HtEGaGGGHAPDii~~~~~~nvLpsSTnPT~Pyt~nt~~EhldMlmvcHhL~~~ipeDvafAesRiR~eTI 213 (389)
T d1e9yb2 136 GR--TMHTFHTEGAGGGHAPDIIKVAGEHNILPASTNPTIPFTVNTEAEHMDMLMVCHHKDKSIKEDVQFADSRIRPQTI 213 (389)
T ss_dssp TC--CEEETTTTSTTSCSTTTGGGGGGSTTEEEEECGGGCSCBTTHHHHHHHHHHHTTTCCSSCHHHHHHHHHHCCHHHH
T ss_pred CC--cceeeecCCCCCCCccHHHHHccCCCccCCCCCCCCCcccccHHHhhchhhhhccCCCCCchhHHHHhhcccchhh
Confidence 11 2355543 134444444445443322 221 0 011222
Q ss_pred ccHHHHHHcCCcEEEcCCCCCCCCCCCH-HHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 314 APIKEMLHADICVSLGTDGAPSNNRMSI-VDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 314 ~~~~~~~~~Gv~v~~gtD~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
+.-..|+|-|+.-.++||+...+.-... .+.++.+-.+.+.+..+..........-....+..+|+|||.+.|+++.+|
T Consensus 214 aAEdvLhD~GaiSi~sSDsqaMGRvgEvi~RtwQtA~kmk~~rG~l~~d~~~~DN~RvkRYiAKYTINPAIahGis~~VG 293 (389)
T d1e9yb2 214 AAEDTLHDMGAFSITSSDSQAMGRVGEVITRTWQTADKNKKEFGRLKEEKGDNDNFRIKRYLSKYTINPAIAHGISEYVG 293 (389)
T ss_dssp HHHHHHHHTTSCCEECCCTTSSCCTTSHHHHHHHHHHHHHHHHCSCSSCCSSSCHHHHHHHHGGGTHHHHHHTTCTTTSS
T ss_pred hhHHHhhccCceeeecccccccchhHHHHHHHHHHHHHHHHHhhcCCccCCCcchHHHHhhhhhcccChHHhcCchhccC
Confidence 3345588999999999999866444443 455555443332222111111111123345667778999999999999999
Q ss_pred ccccCcCC
Q 015784 393 SLEAGKKV 400 (400)
Q Consensus 393 ~i~~G~~A 400 (400)
|||+||.|
T Consensus 294 SvE~GK~a 301 (389)
T d1e9yb2 294 SVEVGKVH 301 (389)
T ss_dssp SSCTTSBG
T ss_pred cccccccc
Confidence 99999974
|
| >d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Phosphotriesterase-like domain: Phosphotriesterase homology protein species: Escherichia coli [TaxId: 562]
Probab=99.21 E-value=1.9e-09 Score=93.23 Aligned_cols=232 Identities=12% Similarity=0.058 Sum_probs=133.6
Q ss_pred HHHHHHHhcCcceeeccC----cCCHHHHHHHHHHcCCeEEEecccccCCCCCCcccccCCchHHHHHHHHHHHHhccCC
Q 015784 129 LCGIELIHSGVTCFAEAG----GQHVSEMAKAVELLGLRACLVQSTMDCGEGLPASWAVRTTDDCIQSQKELYAKHHHAA 204 (400)
Q Consensus 129 ~~~~~~l~~GvTt~~~~~----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (400)
..+.++.+.|++++.+.. +...+.+.+.+++.+.+.+...+++.... .+................+.+.......
T Consensus 37 ~~l~~~~~~Gv~~iV~~t~~~~g~d~~~~~~la~~~~~~i~~~~G~hp~~~-~p~~~~~~~~~~~~~~~~~~i~~~~~~~ 115 (291)
T d1bf6a_ 37 QEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQDAF-FPEHVATRSVQELAQEMVDEIEQGIDGT 115 (291)
T ss_dssp HHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCCGGG-CCTHHHHSCHHHHHHHHHHHHHTCSTTS
T ss_pred HHHHHHHHcCCCEEEEcCCCccccCHHHHHHHHHHcCCCeeeeeeecCccc-CCcccCcCCHHHHHHHHHHHHHHHHhcc
Confidence 345667889999998753 24567778888888988776655543221 1222222222222222222232222222
Q ss_pred CCCeEEE--eeccccc--cCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeE
Q 015784 205 DGRIRIW--FGIRQIM--NATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSA 280 (400)
Q Consensus 205 ~~~~~~~--~~~~~~~--~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 280 (400)
...+... .+..... ....+.++..++.|++.|+||.+|+.......+ .++.+...+......++.
T Consensus 116 ~~~~~~IGe~g~d~~~~~~~q~~~f~~~~~~A~~~~lPv~iH~r~~~~~~e-----------~~~~l~~~~~~~~~~~~~ 184 (291)
T d1bf6a_ 116 ELKAGIIAEIGTSEGKITPLEEKVFIAAALAHNQTGRPISTHTSFSTMGLE-----------QLALLQAHGVDLSRVTVG 184 (291)
T ss_dssp SCCEEEEEEEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCSHHH-----------HHHHHHHTTCCGGGEEEC
T ss_pred CceEEEEEeeccccCCCCHHHHHHHHHHHHHHHHhCCCeEEeccchhhhHH-----------HHHHHHHhCCCcccceec
Confidence 2222111 2222211 112245888889999999999999864432111 445666766666667778
Q ss_pred Ee-cCCChhHHHHHHhcCCeEEECccccccc----cCcccHHHHHHcC--CcEEEcCCCCCC-------CCCCCHHHHHH
Q 015784 281 HT-VWVNHTEIGLLSRAGVKVSHCPASAMRM----LGFAPIKEMLHAD--ICVSLGTDGAPS-------NNRMSIVDEMY 346 (400)
Q Consensus 281 h~-~~~~~~~i~~~~~~~~~~~~~p~~~~~~----~~~~~~~~~~~~G--v~v~~gtD~~~~-------~~~~~~~~~~~ 346 (400)
|+ ..-+.+.++++.+.|..+.+.=...... .....++.+.+.+ =++.++||++.. ..+...+ +.
T Consensus 185 H~~f~~~~e~~~~~~~~G~~i~~~g~~~~~~~~~~~~~~~~~~lv~~~p~drilleTD~p~~~p~~~~g~~~~~~~--~~ 262 (291)
T d1bf6a_ 185 HCDLKDNLDNILKMIDLGAYVQFDTIGKNSYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKANGGYGYDYL--LT 262 (291)
T ss_dssp CCCSSCCHHHHHHHHHTTCEEEECCTTCTTTSCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGGGTSCCTTHH--HH
T ss_pred ccCCCCCHHHHHHHHhcCeeEEecccccccCCcHHHhHHHHHHHHHhCCchhEEEecCCCCccccccCCCCCchhH--HH
Confidence 98 5557788999999999887752221111 1123467788776 479999998732 1111211 11
Q ss_pred HHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 347 LASLINKGREVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
......+ ..|+|.+++-++.+.||+|++
T Consensus 263 ~~~~~l~-----------~~g~s~e~i~~i~~~Np~rlf 290 (291)
T d1bf6a_ 263 TFIPQLR-----------QSGFSQADVDVMLRENPSQFF 290 (291)
T ss_dssp THHHHHH-----------HTTCCHHHHHHHHTHHHHHHC
T ss_pred HHHHHHH-----------HcCCCHHHHHHHHHHHHHHHc
Confidence 1111110 135899999999999999986
|
| >d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenosine/AMP deaminase domain: Adenosine deaminase (ADA) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.15 E-value=2.1e-09 Score=95.28 Aligned_cols=134 Identities=15% Similarity=0.090 Sum_probs=97.4
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCC--ChhHHHHHHhcCCeEE
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWV--NHTEIGLLSRAGVKVS 301 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~--~~~~i~~~~~~~~~~~ 301 (400)
.+.++++.|++.|+++.+|+.|...... ..+.+..+ + ...+.|+..+ +++.++++++.++.+.
T Consensus 193 ~~~~~f~~ar~~gl~~t~HaGE~~~~~~-----------i~~ai~~l---~-~~RIGHG~~l~~d~~l~~~~~~~~I~lE 257 (349)
T d1a4ma_ 193 GHVEAYEGAVKNGIHRTVHAGEVGSPEV-----------VREAVDIL---K-TERVGHGYHTIEDEALYNRLLKENMHFE 257 (349)
T ss_dssp HHHHHHHHHHHHTCEEEEEESSSSCHHH-----------HHHHHHTS---C-CSEEEECGGGGGSHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHcCCceeeccCCCCChHH-----------HHHHHHHh---C-CcccCCceecccCHHHHHHhhhcCceEE
Confidence 4667889999999999999998753211 11222222 2 2467999987 6678999999999999
Q ss_pred ECcccccccc-----CcccHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHH
Q 015784 302 HCPASAMRML-----GFAPIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRM 376 (400)
Q Consensus 302 ~~p~~~~~~~-----~~~~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~ 376 (400)
+||.||..+. ...|++.++++|++|+++||.+.... .++..++..+... .+++.+++. .
T Consensus 258 vCptSN~~~~~~~~~~~HP~~~~~~~gv~v~i~TDDp~~f~-t~Ls~Ey~~a~~~--------------~~l~~~~l~-~ 321 (349)
T d1a4ma_ 258 VCPWSSYLTGAWDPKTTHAVVRFKNDKANYSLNTDDPLIFK-STLDTDYQMTKKD--------------MGFTEEEFK-R 321 (349)
T ss_dssp ECHHHHHHSSSSCTTSCCHHHHHHHTTCCEEECCBCTTTTT-CCHHHHHHHHHHT--------------TTCCHHHHH-H
T ss_pred EcccccccccccCchhhHHHHHHHHCCCeEEEeCCCccccC-CCHHHHHHHHHHH--------------hCcCHHHHH-H
Confidence 9999997541 24589999999999999999986533 4677887766532 358888854 4
Q ss_pred HhHHHHHHcCCC
Q 015784 377 ATINGAKSVLWD 388 (400)
Q Consensus 377 ~T~~~A~~lg~~ 388 (400)
...|+-+...++
T Consensus 322 l~~nsi~~sf~~ 333 (349)
T d1a4ma_ 322 LNINAAKSSFLP 333 (349)
T ss_dssp HHHHHHHTSSCC
T ss_pred HHHHHHHHhCCC
Confidence 555666555443
|
| >d1kcxa1 b.92.1.3 (A:15-66,A:401-490) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: Dihydropyrimidinase related protein-1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.10 E-value=4.6e-11 Score=89.82 Aligned_cols=63 Identities=14% Similarity=0.251 Sum_probs=52.5
Q ss_pred cEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecc-cccCcCCcc
Q 015784 20 TMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGF-VNTHVHTSQ 91 (400)
Q Consensus 20 ~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~-iD~H~H~~~ 91 (400)
++||+|++|++.+ .. ..++|+|+||+|++|+.+... ..++++||+.|++|+||. .|+|+|+..
T Consensus 2 k~lIkng~iv~~~--~~--~~~DilIedG~I~~Ig~~l~~-----~~~a~vIDa~G~~v~~~~G~dAdl~i~D 65 (142)
T d1kcxa1 2 RLLIRGGRIINDD--QS--FYADVYLEDGLIKQIGENLIV-----PGGVKTIEANGRMVIIAVGSDADVVIWD 65 (142)
T ss_dssp CEEEESCEEECSS--CE--EECEEEEETTEEEEEESSCCS-----CSSCEEEECTTCEEECCTTSBCCEEEEE
T ss_pred cEEEECCEEECCC--Cc--EEeeEEEECCEEeEEeccCCC-----CccceeechhhcceeecccccceEEEEe
Confidence 6899999999743 22 357999999999999976542 235799999999999997 999999975
|
| >d2ftwa1 b.92.1.3 (A:7-59,A:394-490) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: Dihydropyrimidine amidohydrolase Pyd2 species: Dictyostelium discoideum [TaxId: 44689]
Probab=98.98 E-value=4.3e-10 Score=85.21 Aligned_cols=64 Identities=20% Similarity=0.331 Sum_probs=51.7
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeec-ccccCcCCcc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPG-FVNTHVHTSQ 91 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG-~iD~H~H~~~ 91 (400)
.++||+|++|++.+ . ...++|+|+||+|.+|+.+... ..++++||+.|++|+|+ ..|+|+|+..
T Consensus 2 ~~iLIkng~iv~~~---~-~~~~DIlI~~G~I~~I~~~i~~-----~~~~~iida~gk~v~i~~G~dad~~i~d 66 (150)
T d2ftwa1 2 GTILIKNGTVVNDD---R-YFKSDVLVENGIIKEISKNIEP-----KEGIKVVDATDKLLLIDVGCDGDIVIWD 66 (150)
T ss_dssp CCEEEESCEEECSS---C-EEECEEEEETTEEEEEESCCCC-----CSSCCEEECTTCEEECSTTSBCCEEEEE
T ss_pred CCEEEECCEEECCC---C-cEEeeEEEECCEEEEEeccCCC-----CCccEEEecccceeeeecCccCceEEEe
Confidence 46899999999743 2 3567999999999999986542 23679999999988665 5999999975
|
| >d1e9yb1 b.92.1.1 (B:1-131,B:432-480) alpha-Subunit of urease {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: alpha-Subunit of urease domain: alpha-Subunit of urease species: Helicobacter pylori [TaxId: 210]
Probab=98.86 E-value=7.1e-09 Score=77.77 Aligned_cols=83 Identities=16% Similarity=0.165 Sum_probs=62.4
Q ss_pred CCCCCCCCCCCCCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh-------hhhccCCCcEEeCCCcE
Q 015784 5 SSGGGSSSGSLGSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQSQI 77 (400)
Q Consensus 5 ~~~~~~~~~~~~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~-------~~~~~~~~~viD~~g~~ 77 (400)
+.|+++++.+.....+++|+|+.|++.. -+.+++|.|+||||+.||+..... ...-...+++|.++|++
T Consensus 52 RdGmgq~~~~~~~~~D~vitna~iid~~----Gi~kadiGikdG~I~~iGkaGnPd~mdgv~~~~iig~~Tevi~geg~I 127 (180)
T d1e9yb1 52 REGMSQSNNPSKEELDLIITNALIVDYT----GIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLI 127 (180)
T ss_dssp SBTTTBCSSCCTTCCSEEEEEEEEEETT----EEEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCE
T ss_pred ccccCCCCCCCccccceEEEeeEEeccC----CeEEeeeeeeCCEEEEeeccCCccccCCCCCCeEECCCceEEecCCce
Confidence 3455565555555679999999999743 356889999999999999754211 11223468999999999
Q ss_pred eeecc----cccCcCCcc
Q 015784 78 LLPGF----VNTHVHTSQ 91 (400)
Q Consensus 78 v~PG~----iD~H~H~~~ 91 (400)
+.||= ||.|+|+..
T Consensus 128 ~TaGADlVlwd~h~hgIk 145 (180)
T d1e9yb1 128 VTAGADLVLWSPAFFGVK 145 (180)
T ss_dssp EEECCCEEEECTTTTTTC
T ss_pred EecCcceEEEchhhcCCC
Confidence 99996 999999854
|
| >d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase, catalytic domain {Alcaligenes faecalis [TaxId: 511]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: D-aminoacylase, catalytic domain domain: N-acyl-D-aminoacid amidohydrolase, catalytic domain species: Alcaligenes faecalis [TaxId: 511]
Probab=98.78 E-value=4.7e-07 Score=79.79 Aligned_cols=63 Identities=19% Similarity=0.083 Sum_probs=41.9
Q ss_pred cCCchHHHHHHHHHHHHhccCCCCCeEEEeeccccc--cCCHHHHHHHHHHHHHcCCeeeEecCCCc
Q 015784 183 VRTTDDCIQSQKELYAKHHHAADGRIRIWFGIRQIM--NATDRLLLETRDMAREFKTGIHMHVAEIP 247 (400)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~e~l~~~~~~a~~~~~~v~~H~~~~~ 247 (400)
+..+.+.+....+++++.... |.+.+-.+....+ ..+.+++.++++.+.++|..+..|.-...
T Consensus 100 ~~at~~ei~~M~~ll~eal~~--GA~G~Stgl~y~P~~~A~~~El~~lak~~~~~g~~~~~h~r~~~ 164 (358)
T d1m7ja3 100 REATADEIQAMQALADDALAS--GAIGISTGAFYPPAAHASTEEIIEVCRPLITHGGVYATHMRDEG 164 (358)
T ss_dssp SCCCHHHHHHHHHHHHHHHHH--TCCEEEEETTSGGGTTCCHHHHHHHHTHHHHHTCEEEEECSCSS
T ss_pred ccCCHHHHHHHHHHHHHHHhc--CCcccccCCcccccccCCHHHHHHHHHHHHhcCCeeeeeecccc
Confidence 344556666666666654443 4455444444333 35778899999999999999999986544
|
| >d4ubpc1 b.92.1.1 (C:1-131,C:435-483) alpha-Subunit of urease {Bacillus pasteurii [TaxId: 1474]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: alpha-Subunit of urease domain: alpha-Subunit of urease species: Bacillus pasteurii [TaxId: 1474]
Probab=98.74 E-value=1.8e-08 Score=75.51 Aligned_cols=83 Identities=16% Similarity=0.155 Sum_probs=60.9
Q ss_pred CCCCCCCCCCC--CCcccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhh-------hhhccCCCcEEeCCC
Q 015784 5 SSGGGSSSGSL--GSSSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADIL-------QQFSQMADQIIDLQS 75 (400)
Q Consensus 5 ~~~~~~~~~~~--~~~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~-------~~~~~~~~~viD~~g 75 (400)
+.|++.++... ....+++|.|+.|++.. -+.+++|-|+||||+.||+..... ...-...+++|.++|
T Consensus 51 RdGmgq~~~~~~~~~~~d~vitn~~i~d~~----Gi~KadiGikdG~I~giGkaGNPd~mdgV~~~~vig~~Teviageg 126 (180)
T d4ubpc1 51 REGMGENGTYTRTENVLDLLLTNALILDYT----GIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEG 126 (180)
T ss_dssp SBTTTBCSSCCTTTTBCSEEEEEEEEEETT----EEEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTT
T ss_pred ccCCCCCCCCCCcCCcceEEEeeEEEecCC----CeEEeeeeeecCEEEEeeccCCccccCCCCCCeEEcCCceEEecCC
Confidence 34555554433 23468999999888643 346889999999999999754211 111235689999999
Q ss_pred cEeeecccccCcCCcc
Q 015784 76 QILLPGFVNTHVHTSQ 91 (400)
Q Consensus 76 ~~v~PG~iD~H~H~~~ 91 (400)
+++.||-||.|+|+.+
T Consensus 127 ~I~TagvIdthvHFp~ 142 (180)
T d4ubpc1 127 KIVTALVLWEPKFFGV 142 (180)
T ss_dssp CEEEEEEEECGGGTTT
T ss_pred ceEEEEEEeehhhcCC
Confidence 9999999999999854
|
| >d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain species: Thermotoga maritima [TaxId: 2336]
Probab=98.72 E-value=1.1e-08 Score=87.74 Aligned_cols=40 Identities=8% Similarity=0.106 Sum_probs=31.7
Q ss_pred CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 338 RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
...+..++..+... .|||++|||+++|.|||++||++|| |
T Consensus 249 ~~~l~~~~~~~v~~--------------~Gls~~eal~~aT~n~A~~lgl~dr-G 288 (288)
T d1o12a2 249 TLFFSQAVKNFRKF--------------TGCSITELAKVSSYNSCVELGLDDR-G 288 (288)
T ss_dssp CCCHHHHHHHHHHH--------------HCCCHHHHHHHHTHHHHHHTTCTTS-S
T ss_pred hhhHHHHHHHHHHH--------------cCCCHHHHHHHHHHHHHHHhCCCCC-C
Confidence 35577777765532 2599999999999999999999975 6
|
| >d1xrta1 b.92.1.3 (A:1-55,A:366-422) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Hydantoinase (dihydropyrimidinase) domain: Two-domain dihydroorotase species: Aquifex aeolicus [TaxId: 63363]
Probab=98.71 E-value=1.2e-08 Score=73.54 Aligned_cols=57 Identities=19% Similarity=0.285 Sum_probs=47.1
Q ss_pred cccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecc
Q 015784 18 SSTMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGF 82 (400)
Q Consensus 18 ~~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~ 82 (400)
|++++|+|++|+|+.. ..-...+|+|++|+|++|++... ...+++||+.|++++||+
T Consensus 1 m~~~likng~viDp~~--g~~~~~DllI~~GkI~~I~~~i~------~~~a~viD~~g~~~~~~l 57 (112)
T d1xrta1 1 MLKLIVKNGYVIDPSQ--NLEGEFDILVENGKIKKIDKNIL------VPEAEIIDAKGLIVCPTL 57 (112)
T ss_dssp CCEEEEESCEEEEGGG--TEEEECEEEEETTEEEEEESSCC------CSSEEEEECTTSEEEECC
T ss_pred CceeEEeCeEEECCCC--CccceeeEEEECCEEEEeecCCC------cccceEEehhccccccee
Confidence 5689999999998654 34467799999999999997643 234699999999999998
|
| >d2eg6a1 c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Dihydroorotase domain: Dihydroorotase species: Escherichia coli [TaxId: 562]
Probab=98.64 E-value=9.4e-08 Score=84.40 Aligned_cols=158 Identities=10% Similarity=0.046 Sum_probs=87.9
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC-hhHHHHHHhcC-
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN-HTEIGLLSRAG- 297 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~-~~~i~~~~~~~- 297 (400)
.....+...++...+.+..+..|+................. .....+......+. -.|..+++ .+.++.+++.+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~eae~~-~~~~~~~l~~~~~~---~~Hi~HiSt~~~v~~ir~~~~ 189 (343)
T d2eg6a1 114 TSVDAIMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFI-ESVMEPLRQRLTAL---KVVFEHITTKDAADYVRDGNE 189 (343)
T ss_dssp SCGGGGHHHHHHHHHHTCCEEECCCCCCTTSCGGGHHHHHH-HHTHHHHHHHCTTC---CEEECSCCSHHHHHHHHTSCT
T ss_pred cchHHHHHHHHHHHHhCchhhhcCccccccccccchhhhhH-HHHHHHHHhhccCc---eEEEEecchhHHHHHHHhcCC
Confidence 34456777888889999999999865432111110000000 00011111112222 35777765 55677776654
Q ss_pred -CeEEECccccc-------------cccCcccHH----------HHHHcCCcEEEcCCCCCC-------------CCCCC
Q 015784 298 -VKVSHCPASAM-------------RMLGFAPIK----------EMLHADICVSLGTDGAPS-------------NNRMS 340 (400)
Q Consensus 298 -~~~~~~p~~~~-------------~~~~~~~~~----------~~~~~Gv~v~~gtD~~~~-------------~~~~~ 340 (400)
+.+.+||...+ ...-.+|+| .+++-++.+.++|||+|. ..+..
T Consensus 190 ~vt~EvtPHhL~L~~~d~~~~~~~~~~k~nPPlR~~~d~~~l~~~~~~g~i~d~iatDHaPh~~e~K~~~~~~~g~~g~e 269 (343)
T d2eg6a1 190 RLAATITPQHLMFNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAP 269 (343)
T ss_dssp TEEEEECHHHHHCCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSSTTBCCCCCCTT
T ss_pred CcceeecCcHHHhhhhhhhcCCCccceeeeccccccchhhHHHHHHHcCCCeeeeecCCCCcccccccccccccccCChH
Confidence 66888987421 001112332 233445779999999854 11222
Q ss_pred HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccc
Q 015784 341 IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLE 395 (400)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~ 395 (400)
..-.+....... .+++++++++++.|||+++|+..+.|.|.
T Consensus 270 ~~l~l~l~~~~~--------------~~~L~~lv~~~S~nPaki~gL~~~kg~I~ 310 (343)
T d2eg6a1 270 TALGSYATVFEE--------------MNALQHFEAFCSVNGPQFYGLPVNDTFIE 310 (343)
T ss_dssp THHHHHHHHHHH--------------TTCGGGHHHHHHTHHHHHHTCCCCCSEEE
T ss_pred HHHHHHHHHHHh--------------cCCHHHHHHHHhHhHHHHhCCCCCCCeEE
Confidence 222232222111 26889999999999999999987788874
|
| >d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.63 E-value=4e-08 Score=69.46 Aligned_cols=70 Identities=20% Similarity=0.213 Sum_probs=56.8
Q ss_pred cEEEEecEEEeecCC---CceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCc
Q 015784 20 TMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (400)
Q Consensus 20 ~~li~n~~i~~~~~~---~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~ 90 (400)
+.+++|++|.|+++. ...++++.|+|++|+|+.||+..+++.... .+.+++|++|+++.+.--..+-++.
T Consensus 2 ~~l~~n~~iaTm~~~~~~~g~ie~aAl~v~~g~I~~vG~~~~l~~~~~-~aa~viDl~Grlv~i~~Gk~AD~~i 74 (103)
T d2puza1 2 TALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLS-TADETTDCGGRWITLEAGKSADFAI 74 (103)
T ss_dssp EEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGS-CCSEEEECTTCEEECCTTSBCCEEE
T ss_pred cEEEEcCEEEEcCCCCCcchHHHHHHHHhhCCCccccChhhhcchhhh-chHhhcCCCCCEEEeeccceeeEEE
Confidence 579999999998764 336799999999999999999888765433 3579999999999987776665553
|
| >d1zzma1 c.1.9.12 (A:1-259) Putative deoxyribonuclease YjjV {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: TatD Mg-dependent DNase-like domain: Putative deoxyribonuclease YjjV species: Escherichia coli [TaxId: 562]
Probab=98.62 E-value=3.7e-06 Score=70.47 Aligned_cols=138 Identities=11% Similarity=0.057 Sum_probs=87.7
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.+...+++|.++++|+.+|+-....+ .++.+...... +..+.|+..-+.+.++++.+.|..+++
T Consensus 114 ~~f~~ql~lA~~~~~Pv~IH~r~a~~~-------------~~~~l~~~~~~--~~~i~H~f~g~~~~~~~~l~~g~~~si 178 (259)
T d1zzma1 114 WLLDEQLKLAKRYDLPVILHSRRTHDK-------------LAMHLKRHDLP--RTGVVHGFSGSLQQAERFVQLGYKIGV 178 (259)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESCHHH-------------HHHHHHHHCCT--TCEEETTCCSCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHhccchhhhhHHHHHH-------------HHHhhhccccc--cceeeecccCCHHHHHHHHHcCCCccc
Confidence 457778899999999999999765543 33444444332 245689988889999999999999988
Q ss_pred CccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC-CC-----CHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHH
Q 015784 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN-RM-----SIVDEMYLASLINKGREVFANGTTDPAALPAETVL 374 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al 374 (400)
.+..... ....++.+++. . =++.+-||+|-... +. .+..-......+... .+++.+++.
T Consensus 179 ~~~~~~~--~~~~~~~~v~~iPldriL~ETD~P~~~~~~~~~~~~~P~~~~~~~~~iA~i-----------~~~~~~ev~ 245 (259)
T d1zzma1 179 GGTITYP--RASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCEL-----------RREPADEIA 245 (259)
T ss_dssp CGGGGCT--TTCSHHHHHHHSCGGGEEECCCBTSSCCTTCTTSCCCGGGHHHHHHHHHHH-----------CSSCHHHHH
T ss_pred ccccccc--chHHHHHHHHhhccceEEEecCCCCcCCCcCCCCCCchHHHHHHHHHHHHH-----------hCCCHHHHH
Confidence 8654322 11223333322 2 26889999872211 00 011111222222211 248999999
Q ss_pred HHHhHHHHHHcCCC
Q 015784 375 RMATINGAKSVLWD 388 (400)
Q Consensus 375 ~~~T~~~A~~lg~~ 388 (400)
+..+.|.-+++++.
T Consensus 246 ~~~~~N~~rlf~lp 259 (259)
T d1zzma1 246 QALLNNTYTLFNVP 259 (259)
T ss_dssp HHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999999873
|
| >d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: alpha-subunit of urease, catalytic domain domain: alpha-subunit of urease, catalytic domain species: Klebsiella aerogenes [TaxId: 28451]
Probab=98.59 E-value=8.8e-07 Score=74.24 Aligned_cols=222 Identities=20% Similarity=0.182 Sum_probs=123.7
Q ss_pred HHHHhcCcceeeccCc---------------CCHHHHHHHHHHcCCeEEE-ecccccCCCCCCcccccCCchHHHHHHHH
Q 015784 132 IELIHSGVTCFAEAGG---------------QHVSEMAKAVELLGLRACL-VQSTMDCGEGLPASWAVRTTDDCIQSQKE 195 (400)
Q Consensus 132 ~~~l~~GvTt~~~~~~---------------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
+.+|.+|+||+.-.+. .++..++++....++..-+ +.+.- +. .....+
T Consensus 15 ~~al~sGiTT~iGgGtGPa~Gt~att~tpg~~~~~~ml~a~d~~P~N~g~~gkGn~-------------s~---~~~l~e 78 (385)
T d1ejxc2 15 EEALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRMLQAADSLPVNIGLLGKGNV-------------SQ---PDALRE 78 (385)
T ss_dssp HHHHHTTEEEEEEECCSSSHHHHHSSCCCHHHHHHHHHHHHTTSSSEEEEEEECCC-------------SS---HHHHHH
T ss_pred HHHHhcCCeeeecCccCCCCCCCCcCcCCCHHHHHHHHHhhhhCCcceeeeecccc-------------CC---hHHHHH
Confidence 4589999999996431 2345677888777776533 22110 01 111222
Q ss_pred HHHHhccCCCCCeEEEeeccccccCCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChH-HHHhHhCCCC
Q 015784 196 LYAKHHHAADGRIRIWFGIRQIMNATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTV-TFLDKIEFLQ 274 (400)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~ 274 (400)
.++ . +.+. +..|..+..++..+...++.|.+++++|.+|.+.-. +-. .+ ..+...+
T Consensus 79 qi~---A---Ga~G--lKiHEDwGatpa~id~~L~vad~~dvqv~iHtDtlN-E~g-----------fvedT~~a~~--- 135 (385)
T d1ejxc2 79 QVA---A---GVIG--LKIHEDWGATPAAIDCALTVADEMDIQVALHSDTLN-ESG-----------FVEDTLAAIG--- 135 (385)
T ss_dssp HHH---H---TCSE--EEEEGGGCCCHHHHHHHHHHHHHHTCEEEEECCTTC-SSC-----------CHHHHHHHHT---
T ss_pred HHH---h---hhce--ecCCcccccChHHHHHHHHhHhhcCceEEEeccccc-ccc-----------cchhhHHHhC---
Confidence 222 1 2222 455778888999999999999999999999985322 111 12 2222222
Q ss_pred CCeeeEEecCCC-------hhHHHHHHhcCCe-EEECccccc---------------------------------cccCc
Q 015784 275 NNLLSAHTVWVN-------HTEIGLLSRAGVK-VSHCPASAM---------------------------------RMLGF 313 (400)
Q Consensus 275 ~~~~~~h~~~~~-------~~~i~~~~~~~~~-~~~~p~~~~---------------------------------~~~~~ 313 (400)
.| ..|..|.. ++-++.....++. -+..|.--+ |.+.+
T Consensus 136 gR--tiH~~H~EGaGGGHAPDii~~~~~~nvlpsSTnPT~P~t~nt~~EhldMlmvcHhL~~~ipeDvafAesRiR~eTi 213 (385)
T d1ejxc2 136 GR--TIHTFHTEGAGGGHAPDIITACAHPNILPSSTNPTLPYTLNTIDEHLDMLMVCHHLDPDIAEDVAFAESRIRRETI 213 (385)
T ss_dssp TC--CEEESSTTSTTSSSTTTGGGGGGCTTEEEEEESTTSSCBTTHHHHHHHHHHHC----------CHHHHHHSCHHHH
T ss_pred CC--ceeeeecccCCCCccchhhHhhccCcccCCCCCCCCCCccCchHhhCCceeecccCCCCChhHHhhhhccccchhh
Confidence 12 23555431 3334443333443 333333100 11222
Q ss_pred ccHHHHHHcCCcEEEcCCCCCCCCCCC-HHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCcc
Q 015784 314 APIKEMLHADICVSLGTDGAPSNNRMS-IVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIG 392 (400)
Q Consensus 314 ~~~~~~~~~Gv~v~~gtD~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G 392 (400)
+.-..|+|-|..-.++||+...+.... ..+.++.+-.+...+..+..........-....+..+|+|||.+.|+++.+|
T Consensus 214 aAEdvLhD~GaiSi~sSDsQaMGRvGEvi~RtwqtA~kmk~~rG~l~~d~~~~DN~RvkRYIAKYTINPAIahGIsh~VG 293 (385)
T d1ejxc2 214 AAEDVLHDLGAFSLTSSDSQAMGRVGEVILRTWQVAHRMKVQRGALAEETGDNDNFRVKRYIAKYTINPALTHGIAHEVG 293 (385)
T ss_dssp HHHHHHHHTTSSCEEECCTTSSSCTTCHHHHHHHHHHHHHHHHCSCTTCCSSSCHHHHHHHHHHHTHHHHHHTTCTTTSS
T ss_pred hhHHHhhccCceeeecccccccCcCCcchhhhHHHHHHHHHhhccCCCCCCCCcchHHHhhhhhhccChHHHcCccceec
Confidence 233558899999999999986544333 4455555544432222221111112223456678889999999999999887
Q ss_pred cc
Q 015784 393 SL 394 (400)
Q Consensus 393 ~i 394 (400)
.+
T Consensus 294 MF 295 (385)
T d1ejxc2 294 MF 295 (385)
T ss_dssp CG
T ss_pred cc
Confidence 43
|
| >d1yixa1 c.1.9.12 (A:1-265) Putative deoxyribonuclease YcfH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: TatD Mg-dependent DNase-like domain: Putative deoxyribonuclease YcfH species: Escherichia coli [TaxId: 562]
Probab=98.58 E-value=4.2e-06 Score=70.37 Aligned_cols=141 Identities=14% Similarity=0.133 Sum_probs=91.1
Q ss_pred HHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEEC
Q 015784 224 LLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSHC 303 (400)
Q Consensus 224 ~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~~ 303 (400)
.+...+++|.+.++|+.+|+-+...+ .++++....... ...+.|+..-+.+.++++.+.|..+++.
T Consensus 112 ~f~~ql~lA~~~~lPv~iH~r~a~~~-------------~~~il~~~~~~~-~~~v~H~FsG~~~~a~~~l~~g~~~s~~ 177 (265)
T d1yixa1 112 SFIHHIQIGRELNKPVIVHTRDARAD-------------TLAILREEKVTD-CGGVLHCFTEDRETAGKLLDLGFYISFS 177 (265)
T ss_dssp HHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHTTGGG-TCEEETTCCSCHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHHhCCCcccchhhHHHH-------------HHHHHHhhcccC-cceEEEeecCChHHHHHHHHcCCeecCc
Confidence 46777799999999999999766543 333444333222 2357899988999999999999999987
Q ss_pred ccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC---------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHH
Q 015784 304 PASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN---------RMSIVDEMYLASLINKGREVFANGTTDPAALPAET 372 (400)
Q Consensus 304 p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 372 (400)
+.....- ...++.+++. . =++.+-||+|-..+ +..+..-......+ .++++++
T Consensus 178 g~~~~~~--~~~l~~~v~~iPldrlLlETD~P~~~p~~~~~~~n~P~~i~~~~~~iA~i--------------~~~~~~e 241 (265)
T d1yixa1 178 GIVTFRN--AEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVL--------------KGVAVEE 241 (265)
T ss_dssp GGGGSTT--CHHHHHHHHHSCGGGEEECCCBTSCCCTTCTTSCCCGGGHHHHHHHHHHH--------------HTSCHHH
T ss_pred cccccch--hHHHHHHHHhcchhceEeecCCcccCccccCCCCCCcHHHHHHHHHHHHH--------------HCcCHHH
Confidence 6544321 1223333322 2 26889999873211 11122222221111 1489999
Q ss_pred HHHHHhHHHHHHcCCCC-Ccccc
Q 015784 373 VLRMATINGAKSVLWDN-DIGSL 394 (400)
Q Consensus 373 al~~~T~~~A~~lg~~~-~~G~i 394 (400)
+.+..+.|.-+++|++. ++++|
T Consensus 242 v~~~~~~Na~~lf~l~~~~~~~~ 264 (265)
T d1yixa1 242 LAQVTTDNFARLFHIDASRLQSI 264 (265)
T ss_dssp HHHHHHHHHHHHTTCCGGGGCCC
T ss_pred HHHHHHHHHHHHhCCCHHHhccc
Confidence 99999999999999984 56665
|
| >d1xwya1 c.1.9.12 (A:1-260) Deoxyribonuclease TatD (MttC) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: TatD Mg-dependent DNase-like domain: Deoxyribonuclease TatD (MttC) species: Escherichia coli [TaxId: 562]
Probab=98.58 E-value=6e-06 Score=69.09 Aligned_cols=137 Identities=12% Similarity=-0.013 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.+...+++|.++++||.+|+-....+ .++.+..... .....+.|+..-+.+.++++.+.|..+++
T Consensus 108 ~~f~~ql~lA~~~~lPviiH~r~a~~~-------------~~~il~~~~~-~~~~~v~H~f~g~~~~~~~~~~~g~~~s~ 173 (260)
T d1xwya1 108 RAFVAQLRIAADLNMPVFMHCRDAHER-------------FMTLLEPWLD-KLPGAVLHCFTGTREEMQACVAHGIYIGI 173 (260)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHGGGGG-GSSCEEECSCCCCHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhcCCceEeeeccchhH-------------HHHHHHHhhc-cCcccchhhhhccHHHHHHhhhhcccccc
Confidence 346677799999999999999765543 3344443322 12345689999899999999999999988
Q ss_pred CccccccccCcccHHHHHHc-C-CcEEEcCCCCCCCC-------------CCCHHHHHHHHHHHhcccccccCCCCCCCC
Q 015784 303 CPASAMRMLGFAPIKEMLHA-D-ICVSLGTDGAPSNN-------------RMSIVDEMYLASLINKGREVFANGTTDPAA 367 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~~-G-v~v~~gtD~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (400)
.+....... ...++.+++. . =++.+=||+|...+ +..+..-... +... .+
T Consensus 174 ~g~~~~~~~-~~~~~~~~~~iPldrlllETD~P~~~p~~~~~~~~~~~NeP~~l~~v~~~---lA~~-----------~g 238 (260)
T d1xwya1 174 TGWVCDERR-GLELRELLPLIPAEKLLIETDAPYLLPRDLTPKPSSRRNEPAHLPHILQR---IAHW-----------RG 238 (260)
T ss_dssp CGGGGCTTT-SHHHHHHGGGSCGGGEEECCCTTSCCCTTCTTCCCSSCCCGGGHHHHHHH---HHHH-----------HT
T ss_pred Cccccchhh-HHHHHHHHHhhhhhheeeecCCCCCCCccccccccCCCCChHHHHHHHHH---HHHH-----------hC
Confidence 765433211 1123333332 2 26889999873211 0112222222 1111 14
Q ss_pred CCHHHHHHHHhHHHHHHcCCC
Q 015784 368 LPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 368 l~~~~al~~~T~~~A~~lg~~ 388 (400)
++++++.+..+.|.-+++|+.
T Consensus 239 ~~~~ev~~~~~~N~~~~f~l~ 259 (260)
T d1xwya1 239 EDAAWLAATTDANVKTLFGIA 259 (260)
T ss_dssp CCHHHHHHHHHHHHHHHHCCC
T ss_pred cCHHHHHHHHHHHHHHHhCCC
Confidence 899999999999999999974
|
| >d1j6oa_ c.1.9.12 (A:) Hypothetical protein TM0667 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: TatD Mg-dependent DNase-like domain: Hypothetical protein TM0667 species: Thermotoga maritima [TaxId: 2336]
Probab=98.29 E-value=3.9e-06 Score=70.26 Aligned_cols=134 Identities=13% Similarity=0.096 Sum_probs=85.9
Q ss_pred HHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCChhHHHHHHhcCCeEEE
Q 015784 223 RLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVNHTEIGLLSRAGVKVSH 302 (400)
Q Consensus 223 e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~~~~i~~~~~~~~~~~~ 302 (400)
+.+.+.+++|.++++|+.+|+-....+ .++.+...+.... ..+.|+..-+.+.++++.+.|..+++
T Consensus 112 ~vF~~ql~lA~~~~lPviiH~r~a~~~-------------~~~il~~~~~~~~-~~i~H~fsG~~~~~~~~l~~g~~is~ 177 (260)
T d1j6oa_ 112 RVFVEQIELAGKLNLPLVVHIRDAYSE-------------AYEILRTESLPEK-RGVIHAFSSDYEWAKKFIDLGFLLGI 177 (260)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEESCHHH-------------HHHHHHHSCCCSS-CEEETTCCSCHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHHHhcCcceEEeeccchHH-------------HHHHHHhhcCCCC-CeeeeccccCHHHHHHHHhCCCceee
Confidence 457888899999999999999765543 4455555544332 35689999899999999999999998
Q ss_pred CccccccccCcccHHHHHH-cC-CcEEEcCCCCCCCC---------CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHH
Q 015784 303 CPASAMRMLGFAPIKEMLH-AD-ICVSLGTDGAPSNN---------RMSIVDEMYLASLINKGREVFANGTTDPAALPAE 371 (400)
Q Consensus 303 ~p~~~~~~~~~~~~~~~~~-~G-v~v~~gtD~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 371 (400)
.+...+.- ...++.+++ -. =++.+=||+|-..+ +..+..-+.. +... .+++++
T Consensus 178 ~g~~~~~~--~~~~~~~v~~iPldrlllETD~P~l~p~~~~~~~n~P~~l~~v~~~---iA~~-----------~~~~~~ 241 (260)
T d1j6oa_ 178 GGPVTYPK--NEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVET---ISQV-----------LGVPEA 241 (260)
T ss_dssp CGGGGCTT--CHHHHHHHHHHCGGGEEECCCBTSCCCGGGTTSCCCGGGHHHHHHH---HHHH-----------HTSCHH
T ss_pred ccccccch--HHHHHHHHHhcccceEEEecCCCCCCCcccCCCCCChHHHHHHHHH---HHHH-----------hCcCHH
Confidence 76543321 111222222 12 26788999873211 1112221222 1111 148999
Q ss_pred HHHHHHhHHHHHHcC
Q 015784 372 TVLRMATINGAKSVL 386 (400)
Q Consensus 372 ~al~~~T~~~A~~lg 386 (400)
++.+..+.|.-++++
T Consensus 242 ev~~~~~~N~~rlF~ 256 (260)
T d1j6oa_ 242 KVDEATTENARRIFL 256 (260)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988775
|
| >d2q09a1 b.92.1.10 (A:4-65,A:367-407) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Probable 4-imidazolone-5-propanoate amidohydrolase GOS 1928421 species: Environmental samples
Probab=97.95 E-value=7.2e-06 Score=56.29 Aligned_cols=58 Identities=14% Similarity=0.219 Sum_probs=46.7
Q ss_pred ccEEEEecEEEeecCC---CceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEee
Q 015784 19 STMILHNAVIVTMDKE---SRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~---~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~ 79 (400)
.+.+.+|+++-|+++. -..+++++|+|++|+|..|||..++|..+ +..+.|++|+++.
T Consensus 2 cd~lw~n~~lATm~~~~~~yG~ie~~ai~v~~g~I~~vgp~~~lpa~~---~~~~~d~~gr~~t 62 (103)
T d2q09a1 2 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGPY---PAHWQDMKGKLVT 62 (103)
T ss_dssp CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC--C---CTTSEECTTCEEE
T ss_pred cceeeecCEEEEecCCCCCcceeccceEEEeCCeEEEEEehhhCCccc---cchhhhcccceEE
Confidence 3678999999998765 45789999999999999999998876522 3467899999764
|
| >d2bb0a1 b.92.1.10 (A:3-73,A:374-415) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Bacillus subtilis [TaxId: 1423]
Probab=97.94 E-value=4e-10 Score=81.96 Aligned_cols=71 Identities=11% Similarity=0.086 Sum_probs=49.4
Q ss_pred HHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCcC
Q 015784 320 LHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGKK 399 (400)
Q Consensus 320 ~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~ 399 (400)
.+.|..+.++||++..+...+.++.++.+.... .+...+++.++++++|.+||+++++++++|+|++||.
T Consensus 8 ~n~G~~ltl~sdgp~~g~~m~~l~~i~~a~~~~----------~~~~il~~~~al~~aT~~~A~~l~~~~~~g~l~~g~~ 77 (113)
T d2bb0a1 8 INIGQLLTMESSGPRAGKSMQDLHVIEDAVVGI----------HEQKIVFAGQKGAEAGYEADEIIDCSGRLVTLKAGRS 77 (113)
T ss_dssp EEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEE----------ETTEEEEEEETTTTTTCEEEEEEECTTCEEECSTTSB
T ss_pred HhcCCeEecCCCCccccchhhhHHHhhhhhhhh----------ccccccCHHHHHHHHHHHHHHHhCCcCcEEEEcCCCc
Confidence 355788889999986543333332222211000 1223478889999999999999999999999999998
Q ss_pred C
Q 015784 400 V 400 (400)
Q Consensus 400 A 400 (400)
|
T Consensus 78 a 78 (113)
T d2bb0a1 78 A 78 (113)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >d1o12a1 b.92.1.5 (A:1-43,A:332-364) N-acetylglucosamine-6-phosphate deacetylase, NagA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: N-acetylglucosamine-6-phosphate deacetylase, NagA domain: N-acetylglucosamine-6-phosphate deacetylase, NagA species: Thermotoga maritima [TaxId: 2336]
Probab=97.21 E-value=0.00035 Score=42.53 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=39.3
Q ss_pred EEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeecccccCcCCc
Q 015784 21 MILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFVNTHVHTS 90 (400)
Q Consensus 21 ~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~iD~H~H~~ 90 (400)
++|.+..|+++ -++. --++|.+++|+|..|-..+. + ...++||||+|.|.|-.
T Consensus 1 M~iE~VLIVDP-idGE--yTGdvEf~e~kI~~I~k~ec---------t-----p~~ilMP~f~dg~~a~~ 53 (76)
T d1o12a1 1 MIVEKVLIVDP-IDGE--FTGDVEIEEGKIVKVEKREC---------I-----PRGVLMPRIAEGTRADL 53 (76)
T ss_dssp CEEEEEEEEET-TTEE--EEEEEEEETTEEEEEEECCS---------C-----CSSEEEECCSTTSBCCE
T ss_pred CceeeEEEEcC-CCCc--EeeeEEecCcEEEEEEEecc---------C-----CCeEEcccccCCccccE
Confidence 46788888864 2322 45799999999999976432 0 12789999999999864
|
| >d2dvta1 c.1.9.15 (A:1-325) Thermophilic reversible gamma-resorcylate decarboxylase {Rhizobium sp. MTP-10005 [TaxId: 267998]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: PP1699/LP2961-like domain: Thermophilic reversible gamma-resorcylate decarboxylase species: Rhizobium sp. MTP-10005 [TaxId: 267998]
Probab=97.15 E-value=0.019 Score=48.79 Aligned_cols=150 Identities=9% Similarity=-0.016 Sum_probs=78.2
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEecCCCchhhhHHhhhcCCCCC--------h---HHHHhHhC----CCCCCeeeEEecC
Q 015784 220 ATDRLLLETRDMAREFKTGIHMHVAEIPYENQVVMDTRKVDHG--------T---VTFLDKIE----FLQNNLLSAHTVW 284 (400)
Q Consensus 220 ~~~e~l~~~~~~a~~~~~~v~~H~~~~~~~~~~~~~~~~~~~~--------~---~~~l~~~~----~~~~~~~~~h~~~ 284 (400)
.+...+..+.+.|.++|++|.+|+................... . ...+...+ ..+-+.++.|+..
T Consensus 142 ~~d~~~~pi~~~~~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~r~P~Lk~v~~H~gg 221 (325)
T d2dvta1 142 YDLPQYRPFWGEVEKLDVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEHPRLNIILGHMGE 221 (325)
T ss_dssp TTSGGGHHHHHHHHHHTCCEEEECCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHHHCTTCCEEESGGGT
T ss_pred ccCcccchHHHHHhhCCceEEEecCCCCCcccccccccccccccccccchhhHHHhHHHHhcchhhhccccceeeecccc
Confidence 4555788999999999999999987543322111100000000 0 00011111 3445788899765
Q ss_pred CChhHHHHHHhcCCeEEECccc------------cccc--c---CcccHHHHHH-cCC-cEEEcCCCCCCCCCCCHHHHH
Q 015784 285 VNHTEIGLLSRAGVKVSHCPAS------------AMRM--L---GFAPIKEMLH-ADI-CVSLGTDGAPSNNRMSIVDEM 345 (400)
Q Consensus 285 ~~~~~i~~~~~~~~~~~~~p~~------------~~~~--~---~~~~~~~~~~-~Gv-~v~~gtD~~~~~~~~~~~~~~ 345 (400)
.-+..+.++-.........+.. +... . ....++.+++ .|. ++.+|||+|.. ..-..+
T Consensus 222 ~~~~~~~r~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~drilfGSD~P~~----~~~~~~ 297 (325)
T d2dvta1 222 GLPYMMWRIDHRNAWVKLPPRYPAKRRFMDYFNENFHITTSGNFRTQTLIDAILEIGADRILFSTDWPFE----NIDHAS 297 (325)
T ss_dssp THHHHHHHHHHTTTTCCSCCSSSCSSCHHHHHHHHEEEECTTCCCHHHHHHHHTTTCGGGEECCCCTTTS----CHHHHH
T ss_pred ccchHHHHHHHhhhhhccccccccccchHHHhhccccccccCCcCHHHHHHHHHHhCCCeEEEeCCCCCC----ChHhHH
Confidence 4344445543332221111110 1111 1 1123444444 343 89999999743 122222
Q ss_pred HHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 346 YLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
.... ..+++.++.=+..-.|+++++|++
T Consensus 298 ~~~~---------------~~~l~~~~~~~Il~~NA~rl~~Ld 325 (325)
T d2dvta1 298 DWFN---------------ATSIAEADRVKIGRTNARRLFKLD 325 (325)
T ss_dssp HHHH---------------HSSSCHHHHHHHHTHHHHHHTTCC
T ss_pred HHHH---------------cCCCCHHHHHHHHhHHHHHHHCcC
Confidence 2211 124899998999999999999985
|
| >d2ffia1 c.1.9.15 (A:10-280) Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: PP1699/LP2961-like domain: Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 species: Pseudomonas putida [TaxId: 303]
Probab=97.07 E-value=0.015 Score=47.34 Aligned_cols=58 Identities=7% Similarity=-0.007 Sum_probs=38.0
Q ss_pred HHHHHHc-C-CcEEEcCCCCCCCC--CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCC
Q 015784 316 IKEMLHA-D-ICVSLGTDGAPSNN--RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWD 388 (400)
Q Consensus 316 ~~~~~~~-G-v~v~~gtD~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~ 388 (400)
++++++. | =++.+|||+|.... ..+....+.....+ +++.++.=+....|+++++|++
T Consensus 210 l~~~i~~~g~dRilfGSD~P~~~~~~~~~~~~~~~~~~~~---------------~l~~~~~~~il~~NA~rlfg~d 271 (271)
T d2ffia1 210 LCALEAHYGAERLMWGSDWPHTQHESEVSFGSAVEQFEAL---------------GCSAQLRQALLLDTARALFGFE 271 (271)
T ss_dssp HHHHHHHTCGGGEEEECCTTCTTCTTTCCHHHHHHHHHHH---------------CCCHHHHHHHHTHHHHHHTTCC
T ss_pred HHHHHHHhCCCcEEEeCCCCCCcccCCCCHHHHHHHHHhc---------------CCCHHHHHHHHhHHHHHHhCcC
Confidence 4555543 4 47999999974321 23343334333322 3889999999999999999985
|
| >d2a3la1 c.1.9.1 (A:212-839) AMP deaminase (AMPD), catalytic domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: Adenosine/AMP deaminase domain: AMP deaminase (AMPD), catalytic domain species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.85 E-value=0.0011 Score=61.05 Aligned_cols=122 Identities=18% Similarity=0.117 Sum_probs=82.5
Q ss_pred cCCeeeEecCCCchhhhHHhhhcCCCCChHHHHhHhCCCCCCeeeEEecCCC--hhHHHHHHhcCCeEEECccccccc-c
Q 015784 235 FKTGIHMHVAEIPYENQVVMDTRKVDHGTVTFLDKIEFLQNNLLSAHTVWVN--HTEIGLLSRAGVKVSHCPASAMRM-L 311 (400)
Q Consensus 235 ~~~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~h~~~~~--~~~i~~~~~~~~~~~~~p~~~~~~-~ 311 (400)
.++.+..|++|...... .+..+- . ...|.|+..+. +.....++..++.+.+||.||..+ .
T Consensus 441 ~~~~lrpH~GE~~~~~~-----------l~~alL-----~-adrIgHGv~l~~~p~L~~l~~~~qI~le~cPlSN~~l~~ 503 (628)
T d2a3la1 441 TTITLRPHSGEAGDIDH-----------LAATFL-----T-CHSIAHGINLRKSPVLQYLYYLAQIGLAMSPLSNNSLFL 503 (628)
T ss_dssp CCCEECCCCSSSSCTHH-----------HHHHHH-----H-CSSCSCCGGGGGCHHHHHHHHHHTCCEEECHHHHTTTTC
T ss_pred CCeeeecccCCCCCHHH-----------HHHHHh-----c-cccccceeEccCCHHHHHHHHhcCceEEECCCchhhccc
Confidence 56889999998654321 111111 1 12357888764 456788888999999999999765 2
Q ss_pred --CcccHHHHHHcCCcEEEcCCCCCCC-C-CCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCC
Q 015784 312 --GFAPIKEMLHADICVSLGTDGAPSN-N-RMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLW 387 (400)
Q Consensus 312 --~~~~~~~~~~~Gv~v~~gtD~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~ 387 (400)
...|++.+++.|++|+++||.|... . ...+..|...+...- +++..|.-.+| .|.-+..|+
T Consensus 504 ~~~~hP~~~~~~~Gl~VsLsTDDPl~f~~t~epL~eEY~~aa~~~--------------~Ls~~dl~elA-rNSV~~S~f 568 (628)
T d2a3la1 504 DYHRNPFPVFFLRGLNVSLSTDDPLQIHLTKEPLVEEYSIAASVW--------------KLSACDLCEIA-RNSVYQSGF 568 (628)
T ss_dssp CSTTCSHHHHHHTTCCEEECCBCHHHHCCSSSHHHHHHHHHHHHH--------------TCCHHHHHHHH-HHHHHHSCC
T ss_pred ChhhCcHHHHHHCCCeEEEcCCCccccCCCcchHHHHHHHHHHHh--------------CCCHHHHHHHH-HHHHHHhCC
Confidence 3469999999999999999997421 1 223556666655444 38888877765 455555555
Q ss_pred C
Q 015784 388 D 388 (400)
Q Consensus 388 ~ 388 (400)
+
T Consensus 569 ~ 569 (628)
T d2a3la1 569 S 569 (628)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >d2icsa1 b.92.1.8 (A:4-54,A:322-371) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Adenine deaminase domain: Putative adenine deaminase EF0837 species: Enterococcus faecalis [TaxId: 1351]
Probab=96.44 E-value=0.0011 Score=44.97 Aligned_cols=46 Identities=15% Similarity=0.246 Sum_probs=36.1
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcE
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQI 77 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~ 77 (400)
.+++|+|++.+++ +++ +|.|.+|||.+||+... .++.+++|+.|+.
T Consensus 2 ~d~~i~~~~~~~g----~~~---diai~~~ki~a~~~~~~------~~a~~~~~L~~~~ 47 (101)
T d2icsa1 2 YDLLIKNGQTVNG----MPV---EIAIKEKKIAAVAATIS------GSAKETIHLEPGT 47 (101)
T ss_dssp EEEEEEEEECTTS----CEE---EEEEETTEEEEEESCCC------CCEEEEEECCTTC
T ss_pred ccEEEEcceecCC----CeE---EEEeccCeeeeeccccc------ccchheEecCCce
Confidence 4789999999853 243 89999999999997543 2457899999863
|
| >d1ra0a1 b.92.1.2 (A:4-55,A:376-426) Cytosine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Cytosine deaminase domain: Cytosine deaminase species: Escherichia coli [TaxId: 562]
Probab=96.36 E-value=0.0015 Score=44.45 Aligned_cols=52 Identities=15% Similarity=0.394 Sum_probs=38.5
Q ss_pred EEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeeccc
Q 015784 22 ILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFV 83 (400)
Q Consensus 22 li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~i 83 (400)
.|+|+++- +....+ .|.|+||+|.+|.+.... . .....++|++|+.++|=+|
T Consensus 4 ~I~NarL~---gr~GL~---~I~I~~G~i~~I~pq~~~---~-~~~~d~lDa~GgL~~p~~i 55 (103)
T d1ra0a1 4 TIINARLP---GEEGLW---QIHLQDGKISAIDAQSGV---M-PITENSLDAEQGLVIPLII 55 (103)
T ss_dssp EEEEEBCT---TCCSEE---EEEEETTEEEEEEEESSC---C-CCCTTEEECTTCEEESEEE
T ss_pred eEEEEEeC---CCCcEE---EEEecCCEEeeeecCCcc---c-cCCCcceeccCCcccCcEE
Confidence 58899886 333555 799999999999976431 1 1245789999999999443
|
| >d3be7a1 b.92.1.9 (A:3-56,A:360-400) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Zn-dependent arginine carboxypeptidase species: Unidentified organism [TaxId: 32644]
Probab=96.11 E-value=1.3e-05 Score=54.26 Aligned_cols=29 Identities=10% Similarity=0.092 Sum_probs=26.6
Q ss_pred HHHHHHhHHHHHHcCCCCC--ccccccCcCC
Q 015784 372 TVLRMATINGAKSVLWDND--IGSLEAGKKV 400 (400)
Q Consensus 372 ~al~~~T~~~A~~lg~~~~--~G~i~~G~~A 400 (400)
++++.+|.|||++++++++ +|+|++||.|
T Consensus 32 ~ai~~~t~~~A~il~l~d~illG~I~~Gk~A 62 (95)
T d3be7a1 32 AEIGKINTKDATVISIPDLILIPQIKEGFDA 62 (95)
T ss_dssp EEEECCCCSSSEEEEEEEEEEEESCCTTSBC
T ss_pred HHHHhhccChHHhcCCCCccccceeccCcee
Confidence 5688899999999999998 5999999987
|
| >d2ooda1 b.92.1.4 (A:3-72,A:398-467) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Bradyrhizobium japonicum [TaxId: 375]
Probab=95.72 E-value=0.0027 Score=46.31 Aligned_cols=41 Identities=22% Similarity=0.378 Sum_probs=34.8
Q ss_pred eeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEee
Q 015784 37 VFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILL 79 (400)
Q Consensus 37 ~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~ 79 (400)
..+++.++|+||+|+++|+...+...+| +.+++|+.++++.
T Consensus 30 ~~~DG~llie~G~I~a~G~~~~l~~~~p--ga~v~d~~d~lg~ 70 (140)
T d2ooda1 30 FHQDGLMVVTDGVIKAFGPYEKIAAAHP--GVEITHIKDRIIV 70 (140)
T ss_dssp EEEEEEEEEESSBEEEEEEHHHHHHHST--TCEEEEEEEEEEE
T ss_pred EecCcEEEEeCCEEEEecCHHHHhhcCC--CceEEecCCceEe
Confidence 4588999999999999999988887766 5799999988653
|
| >d2paja1 b.92.1.4 (A:10-69,A:406-484) Hypothetical protein GOS_1943094 {Environmental samples} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Hypothetical protein GOS 1943094 species: Environmental samples
Probab=94.98 E-value=9.4e-06 Score=60.24 Aligned_cols=64 Identities=9% Similarity=0.072 Sum_probs=43.5
Q ss_pred HHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcccccccCCCCCCCCCCHHHHHHHHhHHHHHHcCCCCCccccccCc
Q 015784 319 MLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKGREVFANGTTDPAALPAETVLRMATINGAKSVLWDNDIGSLEAGK 398 (400)
Q Consensus 319 ~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~ 398 (400)
|+++++.+.+|+|+..+++..-....++ ....+.++++.++|.++|+.+|+++.+|+|++||
T Consensus 4 li~n~~av~~g~~G~a~~~~rv~a~d~r------------------~~~~~~~~i~~~at~~Ga~~l~~~~~ig~l~~G~ 65 (139)
T d2paja1 4 LIRNAAAIMTGGRGTADDPSRVPGPDIR------------------IVGDTIDAIGALAPRPGETIVDATDCVIYVAVGY 65 (139)
T ss_dssp EEECBSEEBCCCCSSSSSCSBCCCCCEE------------------EETTEEEEESSCCCCTTCEEEECBTCEEECSTTS
T ss_pred HHhchhhhhhCCCCCCCCcccccchhhH------------------hhcccHHHHHhhhhhccchhcCCCCccceeccCC
Confidence 4567888999999875421100000000 0113455666789999999999999999999999
Q ss_pred CC
Q 015784 399 KV 400 (400)
Q Consensus 399 ~A 400 (400)
.|
T Consensus 66 ~A 67 (139)
T d2paja1 66 AA 67 (139)
T ss_dssp BC
T ss_pred cc
Confidence 87
|
| >d2i9ua1 b.92.1.4 (A:9-66,A:377-427) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Guanine deaminase species: Clostridium acetobutylicum [TaxId: 1488]
Probab=91.65 E-value=0.0046 Score=43.12 Aligned_cols=25 Identities=20% Similarity=0.244 Sum_probs=22.8
Q ss_pred HHhHHHHHHcCCCCCccccccCcCC
Q 015784 376 MATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 376 ~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+|.++|+++++++++|+|++||.|
T Consensus 41 pat~~ga~~~~~~~~ig~~e~Gk~A 65 (109)
T d2i9ua1 41 PDKYKGNPIIDFRNNIIIFEEGYDF 65 (109)
T ss_dssp CGGGTTSCEEEEEEEEEECSTTCBC
T ss_pred HHHhCCceeeccccceeeecCCCEe
Confidence 3688999999999999999999987
|
| >d2hbva1 c.1.9.15 (A:3-333) 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD {Pseudomonas fluorescens [TaxId: 294]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: TIM beta/alpha-barrel superfamily: Metallo-dependent hydrolases family: PP1699/LP2961-like domain: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD species: Pseudomonas fluorescens [TaxId: 294]
Probab=89.69 E-value=1.8 Score=35.81 Aligned_cols=29 Identities=14% Similarity=0.032 Sum_probs=24.2
Q ss_pred ccCCHHHHHHHHHHHHHcCCeeeEecCCC
Q 015784 218 MNATDRLLLETRDMAREFKTGIHMHVAEI 246 (400)
Q Consensus 218 ~~~~~e~l~~~~~~a~~~~~~v~~H~~~~ 246 (400)
...+...+..+.+.|.+++++|.+|....
T Consensus 151 ~~~~d~~~~p~~~~~~e~~~pv~iH~~~~ 179 (331)
T d2hbva1 151 KDLDDATLEAFLTHCANEDIPILVHPWDM 179 (331)
T ss_dssp BCTTSHHHHHHHHHHHHTTCCEEEECCSC
T ss_pred cccccchhhHHHHHHhccCCceEEecCCC
Confidence 44556679999999999999999998654
|
| >d1v77a_ c.6.3.2 (A:) Ribonuclease P protein component 3, Rnp3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: 7-stranded beta/alpha barrel superfamily: PHP domain-like family: RNase P subunit p30 domain: Ribonuclease P protein component 3, Rnp3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=89.48 E-value=0.41 Score=36.85 Aligned_cols=86 Identities=9% Similarity=0.016 Sum_probs=56.5
Q ss_pred CChhHHHHHHhcCCeEEECccccccc------cCcc----cHHHHHHcCCcEEEcCCCCCCCCCCCHHHHHHHHHHHhcc
Q 015784 285 VNHTEIGLLSRAGVKVSHCPASAMRM------LGFA----PIKEMLHADICVSLGTDGAPSNNRMSIVDEMYLASLINKG 354 (400)
Q Consensus 285 ~~~~~i~~~~~~~~~~~~~p~~~~~~------~~~~----~~~~~~~~Gv~v~~gtD~~~~~~~~~~~~~~~~~~~~~~~ 354 (400)
++...++.++++|+.+.++-...++. .... .++...+.|+++.++||...+..-.++..-+..+..+
T Consensus 106 ~~hvlak~A~e~gV~lEI~~s~ll~~~~~~R~~~i~~~~~~l~l~kky~~piVisSdAh~~~dlr~p~dv~~L~~~~--- 182 (202)
T d1v77a_ 106 IDHVLAKLMVKKNVALGFSLRPLLYSNPYERANLLRFMMKAWKLVEKYKVRRFLTSSAQEKWDVRYPRDLISLGVVI--- 182 (202)
T ss_dssp CCHHHHHHHHHHTCEEEEESHHHHHSCHHHHHHHHHHHHHHHHHHHHHTCCEEEECCCSSGGGCCCHHHHHHHHHHT---
T ss_pred ccHHHHHHHHHCCeEEEEEchhhhccCcccHHHHHHHHHHHHHHHHhcCCcEEEecCCCChhhcCCHHHHHHHHHHc---
Confidence 45667888999999988773332221 1111 2333456799999999976442333344444444333
Q ss_pred cccccCCCCCCCCCCHHHHHHHHhHHHHHHc
Q 015784 355 REVFANGTTDPAALPAETVLRMATINGAKSV 385 (400)
Q Consensus 355 ~~~~~~~~~~~~~l~~~~al~~~T~~~A~~l 385 (400)
|++.+++..+.|.+|-+++
T Consensus 183 ------------Gl~~~~ak~als~~P~~il 201 (202)
T d1v77a_ 183 ------------GMEIPQAKASISMYPEIIL 201 (202)
T ss_dssp ------------TCCHHHHHHTTTHHHHHHH
T ss_pred ------------CCCHHHHHHHHHHHHHHHh
Confidence 5999999999999999876
|
| >d3be7a1 b.92.1.9 (A:3-56,A:360-400) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Zn-dependent arginine carboxypeptidase-like domain: Zn-dependent arginine carboxypeptidase species: Unidentified organism [TaxId: 32644]
Probab=88.71 E-value=0.61 Score=30.76 Aligned_cols=64 Identities=11% Similarity=0.297 Sum_probs=47.2
Q ss_pred ccEEEEecEEEeecCCCceeeceeEEEeCCEEEEecCChhhhhhhccCCCcEEeCCCcEeeeccc---ccCcCCcc
Q 015784 19 STMILHNAVIVTMDKESRVFRNGGVFVVQDRIKAIGQSADILQQFSQMADQIIDLQSQILLPGFV---NTHVHTSQ 91 (400)
Q Consensus 19 ~~~li~n~~i~~~~~~~~~~~~~~i~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~g~~v~PG~i---D~H~H~~~ 91 (400)
.+++|+--..++... +. +-..+++|++|.|.+++.... .+++++..++++.+|++- ++|.++..
T Consensus 2 ~d~~~~pk~yL~~~~-g~-li~a~l~v~~G~i~ai~~~t~-------~~A~il~l~d~illG~I~~Gk~ADlvlvd 68 (95)
T d3be7a1 2 EDFLIKSKGYLDIQT-GE-IIKADLLIRNGKIAEIGKINT-------KDATVISIPDLILIPQIKEGFDADIVGVI 68 (95)
T ss_dssp CCEEEEEEEEECTTT-CC-EECCEEEEETTEEEEEECCCC-------SSSEEEEEEEEEEEESCCTTSBCCEEEES
T ss_pred CceEecCcceecccc-ch-hhhhhhhhhcCcHHHHHhhcc-------ChHHhcCCCCccccceeccCceeeEEEEc
Confidence 467888887876432 22 356799999999999986432 357999999998888886 67777644
|
| >d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: Imidazolonepropionase-like domain: Imidazolonepropionase species: Agrobacterium tumefaciens [TaxId: 358]
Probab=87.68 E-value=0.0036 Score=43.26 Aligned_cols=33 Identities=21% Similarity=0.105 Sum_probs=27.7
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 368 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 368 l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
+.+++.|...|.++++.+.+++++++|++||+|
T Consensus 38 vG~~~~l~~~~~~aa~viDl~Grlv~i~~Gk~A 70 (103)
T d2puza1 38 AGPESDLPDDLSTADETTDCGGRWITLEAGKSA 70 (103)
T ss_dssp EEETTSCCGGGSCCSEEEECTTCEEECCTTSBC
T ss_pred cChhhhcchhhhchHhhcCCCCCEEEeecccee
Confidence 445666667788889999999999999999987
|
| >d1p1ma1 b.92.1.4 (A:1-49,A:331-404) Hypothetical protein TM0936 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Composite domain of metallo-dependent hydrolases superfamily: Composite domain of metallo-dependent hydrolases family: SAH/MTA deaminase-like domain: Hypothetical protein TM0936 species: Thermotoga maritima [TaxId: 2336]
Probab=82.04 E-value=0.0033 Score=44.75 Aligned_cols=32 Identities=13% Similarity=-0.095 Sum_probs=28.9
Q ss_pred CCHHHHHHHHhHHHHHHcCCCCCccccccCcCC
Q 015784 368 LPAETVLRMATINGAKSVLWDNDIGSLEAGKKV 400 (400)
Q Consensus 368 l~~~~al~~~T~~~A~~lg~~~~~G~i~~G~~A 400 (400)
.+.+.++.++|..+|..+|..+ +|+|++|+.|
T Consensus 26 ~t~~~~~~~~t~~~a~~~G~~~-~GrIe~G~~A 57 (123)
T d1p1ma1 26 GTIKRVLQGEVKVDLDLSGKLV-MPKIEEGWNA 57 (123)
T ss_dssp TEEEEEEESSCCCSEECTTEEE-EESCCTTSBC
T ss_pred ccHHHHHhhhhccChhhcCCcc-ccccCCCCCc
Confidence 4788999999999999999886 6999999987
|