Citrus Sinensis ID: 015823

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
MRDVIGVNEPFEGLFSAKVRSICSLEFGFLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLVSRASSVKSPNVSVRGGGITLPHNTLAPCTMPTETGGT
cccccccccccccccccccEEEcccccccccccccccccccccccccccccEEEEcccccccccEEEEccccccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEEEccEEEEEEccccEEEEEEEEcccccEEEEccccccccccHHHHHHHHHHccccccEEEEEccEEEEcccEEcccccccHHHHccccccccHHHHcccccccccccEEEEEEEEEEEcccccEEEEEEcccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHcccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccc
cccHHHHHHHHHHHHHHHHHHHccccccccccccccEEEccccHccccccEHHEHccHHHHHccEEEEcccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHccccccHcccccEEEEEEEEccEEEEEEcccccEEEEEccccccEEEEEEcccccccccHHHHHHHHHHccccccEEEEEccccEEEEEEEEEHcccHHHHcccccccccccHcccccccccccEEEccccEEEEEcccccEEEEEEcccHHHHccHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccEEEEEEEEcccccccccccccccEEccccccccccccccccccccccccc
mrdvigvnepfegLFSAKVRSICSLEfgflgrqdgllwykdsghhvsgeFSMAVVQANNlledqsqvesgslsthefgpygtfvgvydghggpetsrYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVtkqwpmkpqiaavgscCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQalhpddsqivVLKHNVWRVKGLIQVSRSIGDVYlkkaefnreplyikfrlrepikrpilsadpsisvhqlqphdQFVIFASDglwehlsnqeavdivqnhpqsgsARRLVKAALQEAAKKREMRYSDLKkidrgvrrhfhdDITVIVVFLDSSLvsrassvkspnvsvrgggitlphntlapctmptetggt
mrdvigvnepfeglfSAKVRSICSLEFGFLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGliqvsrsigdvylkkaefnreplyikfrlrepiKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQnhpqsgsarRLVKAALQEAakkremrysdlkkidrgvrrhfhdDITVIVVFLDSSlvsrassvkspnvsvrgggitlphntlapctmptetggt
MRDVIGVNEPFEGLFSAKVRSICSLEFGFLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDsslvsrassvksPNVSVRGGGITLPHNTLAPCTMPTETGGT
****IGVNEPFEGLFSAKVRSICSLEFGFLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLL************THEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFT*******ADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIV*****************************DLKKIDRGVRRHFHDDITVIVVFLDSSLV*************************************
***********************S**FGFLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQW***P*IAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQ**********ALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFL******************************************
MRDVIGVNEPFEGLFSAKVRSICSLEFGFLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQ********STHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQN**************LQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLVSRASSVKSPNVSVRGGGITLPHNTLAPCTMPTETGGT
*RDVIGVNEPFEGLFSAKVRSICSLEFGFLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSS***************************************
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MRDVIGVNEPFEGLFSAKVRSICSLEFGFLGRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSSLVSRASSVKSPNVSVRGGGITLPHNTLAPCTMPTETGGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query399 2.2.26 [Sep-21-2011]
Q10S32399 Probable protein phosphat yes no 0.924 0.924 0.780 1e-176
Q5Z8P0392 Probable protein phosphat no no 0.899 0.915 0.807 1e-175
Q5PNS9400 Probable protein phosphat yes no 0.924 0.922 0.761 1e-174
Q9FKX4385 Probable protein phosphat no no 0.884 0.916 0.796 1e-172
Q9SD12379 Probable protein phosphat no no 0.877 0.923 0.784 1e-171
Q7XCJ7393 Probable protein phosphat no no 0.909 0.923 0.75 1e-165
Q9LHJ9385 Probable protein phosphat no no 0.872 0.903 0.707 1e-148
Q94CL8384 Probable protein phosphat no no 0.882 0.916 0.675 1e-144
Q0V7V2384 Probable protein phosphat no no 0.832 0.864 0.607 1e-122
Q501F9370 Probable protein phosphat no no 0.854 0.921 0.643 1e-121
>sp|Q10S32|P2C28_ORYSJ Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1 Back     alignment and function desciption
 Score =  617 bits (1591), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 288/369 (78%), Positives = 332/369 (89%)

Query: 31  GRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGH 90
           GRQDGLLWYKD+G  V+GEFSMAVVQANNLLEDQSQVESG+LS  E GP GTF+GVYDGH
Sbjct: 30  GRQDGLLWYKDAGQLVTGEFSMAVVQANNLLEDQSQVESGALSMAEPGPQGTFIGVYDGH 89

Query: 91  GGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAV 150
           GGPET+R+INDH+F HL+RF ++ + MS DVIRKA+QATEEGF+SLV+KQW +KPQIAAV
Sbjct: 90  GGPETARFINDHMFHHLRRFATEHKCMSTDVIRKAFQATEEGFLSLVSKQWSLKPQIAAV 149

Query: 151 GSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALH 210
           GSCCLVGVIC GTLY+ANLGDSRAVLGR VK+TGEV+A QLS+EHNAC E VRQELQA H
Sbjct: 150 GSCCLVGVICSGTLYVANLGDSRAVLGRFVKSTGEVVATQLSSEHNACYEEVRQELQASH 209

Query: 211 PDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADP 270
           PDD QIVVLKHNVWRVKGLIQ+SRSIGDVYLK+ E+NREPL+ KFRLRE  KRPILS++P
Sbjct: 210 PDDPQIVVLKHNVWRVKGLIQISRSIGDVYLKRPEYNREPLHSKFRLRETFKRPILSSEP 269

Query: 271 SISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREM 330
           +I+VHQ+QP+D FVIFASDGLWEHLSNQEAVD+VQN+P++G ARRLVK A+QEAAKKREM
Sbjct: 270 AIAVHQIQPNDHFVIFASDGLWEHLSNQEAVDLVQNNPRNGIARRLVKVAMQEAAKKREM 329

Query: 331 RYSDLKKIDRGVRRHFHDDITVIVVFLDSSLVSRASSVKSPNVSVRGGGITLPHNTLAPC 390
           RYSDLKKIDRGVRRHFHDDITVIVVFLDS+ +S+A+  + P+VS+RGGG+TLP N+LAP 
Sbjct: 330 RYSDLKKIDRGVRRHFHDDITVIVVFLDSNAISKANWSRGPSVSLRGGGVTLPANSLAPF 389

Query: 391 TMPTETGGT 399
           + PT    T
Sbjct: 390 STPTVLSST 398

Oryza sativa subsp. japonica (taxid: 39947)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q5Z8P0|P2C60_ORYSJ Probable protein phosphatase 2C 60 OS=Oryza sativa subsp. japonica GN=Os06g0717800 PE=2 SV=1 Back     alignment and function description
>sp|Q5PNS9|P2C64_ARATH Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1 Back     alignment and function description
>sp|Q9FKX4|P2C79_ARATH Probable protein phosphatase 2C 79 OS=Arabidopsis thaliana GN=At5g66080 PE=2 SV=1 Back     alignment and function description
>sp|Q9SD12|P2C46_ARATH Probable protein phosphatase 2C 46 OS=Arabidopsis thaliana GN=At3g51370 PE=2 SV=1 Back     alignment and function description
>sp|Q7XCJ7|P2C72_ORYSJ Probable protein phosphatase 2C 72 OS=Oryza sativa subsp. japonica GN=Os10g0544900 PE=2 SV=1 Back     alignment and function description
>sp|Q9LHJ9|P2C38_ARATH Probable protein phosphatase 2C 38 OS=Arabidopsis thaliana GN=At3g12620 PE=2 SV=1 Back     alignment and function description
>sp|Q94CL8|P2C48_ARATH Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1 Back     alignment and function description
>sp|Q0V7V2|P2C42_ARATH Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1 Back     alignment and function description
>sp|Q501F9|P2C67_ARATH Probable protein phosphatase 2C 67 OS=Arabidopsis thaliana GN=At5g02760 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query399
255560515397 protein phosphatase 2c, putative [Ricinu 0.924 0.929 0.891 0.0
224078369397 predicted protein [Populus trichocarpa] 0.919 0.924 0.901 0.0
224105139397 predicted protein [Populus trichocarpa] 0.919 0.924 0.888 0.0
224133996397 predicted protein [Populus trichocarpa] 0.924 0.929 0.861 0.0
7768153397 protein phosphatase 2C (PP2C) [Fagus syl 0.924 0.929 0.864 0.0
255579574395 protein phosphatase 2c, putative [Ricinu 0.917 0.926 0.863 0.0
356536388397 PREDICTED: probable protein phosphatase 0.924 0.929 0.864 0.0
449458634397 PREDICTED: probable protein phosphatase 0.919 0.924 0.866 0.0
225428074397 PREDICTED: probable protein phosphatase 0.924 0.929 0.853 0.0
449524832397 PREDICTED: LOW QUALITY PROTEIN: probable 0.919 0.924 0.863 0.0
>gi|255560515|ref|XP_002521272.1| protein phosphatase 2c, putative [Ricinus communis] gi|223539540|gb|EEF41128.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  697 bits (1800), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 329/369 (89%), Positives = 350/369 (94%)

Query: 31  GRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGH 90
           GRQDGLLWYKD G H +GEFSMAVVQANNLLEDQSQ+ESGSLS H+ GP+GTFVGVYDGH
Sbjct: 29  GRQDGLLWYKDHGQHFNGEFSMAVVQANNLLEDQSQLESGSLSLHDSGPFGTFVGVYDGH 88

Query: 91  GGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAV 150
           GGPETSRYINDHLFQHLKRFT++QQSMS DVIRKA+QATEEGF+SLVTKQWPMKPQIAAV
Sbjct: 89  GGPETSRYINDHLFQHLKRFTTEQQSMSVDVIRKAFQATEEGFLSLVTKQWPMKPQIAAV 148

Query: 151 GSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALH 210
           GSCCLVGVIC GTLYIANLGDSRAVLGR VKATGEVL+IQLS EHN CIESVRQE+Q+LH
Sbjct: 149 GSCCLVGVICAGTLYIANLGDSRAVLGRAVKATGEVLSIQLSAEHNVCIESVRQEMQSLH 208

Query: 211 PDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADP 270
           PDDSQIVVLKHNVWRVKGLIQ+SRSIGDVYLKKAEFNREPLY KFRLRE  K+PILSADP
Sbjct: 209 PDDSQIVVLKHNVWRVKGLIQISRSIGDVYLKKAEFNREPLYAKFRLRESFKKPILSADP 268

Query: 271 SISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREM 330
           SISVHQLQPHDQF+IFASDGLWEHLSNQ+AVDIVQNHP++GSA+RLVKAALQEAAKKREM
Sbjct: 269 SISVHQLQPHDQFIIFASDGLWEHLSNQDAVDIVQNHPRNGSAKRLVKAALQEAAKKREM 328

Query: 331 RYSDLKKIDRGVRRHFHDDITVIVVFLDSSLVSRASSVKSPNVSVRGGGITLPHNTLAPC 390
           RYSDLKKIDRGVRRHFHDDITVIVVFLDS+LVSRASSVK  N+SVRGGGI+LP NTLAPC
Sbjct: 329 RYSDLKKIDRGVRRHFHDDITVIVVFLDSNLVSRASSVKCANISVRGGGISLPSNTLAPC 388

Query: 391 TMPTETGGT 399
           T PTE G T
Sbjct: 389 TTPTEAGST 397

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|224078369|ref|XP_002305529.1| predicted protein [Populus trichocarpa] gi|222848493|gb|EEE86040.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224105139|ref|XP_002313699.1| predicted protein [Populus trichocarpa] gi|118485969|gb|ABK94829.1| unknown [Populus trichocarpa] gi|222850107|gb|EEE87654.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224133996|ref|XP_002327730.1| predicted protein [Populus trichocarpa] gi|118486583|gb|ABK95130.1| unknown [Populus trichocarpa] gi|222836815|gb|EEE75208.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|7768153|emb|CAB90634.1| protein phosphatase 2C (PP2C) [Fagus sylvatica] Back     alignment and taxonomy information
>gi|255579574|ref|XP_002530628.1| protein phosphatase 2c, putative [Ricinus communis] gi|223529801|gb|EEF31736.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|356536388|ref|XP_003536720.1| PREDICTED: probable protein phosphatase 2C 64-like [Glycine max] Back     alignment and taxonomy information
>gi|449458634|ref|XP_004147052.1| PREDICTED: probable protein phosphatase 2C 60-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|225428074|ref|XP_002279993.1| PREDICTED: probable protein phosphatase 2C 60 isoform 1 [Vitis vinifera] gi|359475009|ref|XP_003631567.1| PREDICTED: probable protein phosphatase 2C 60 isoform 2 [Vitis vinifera] gi|297744584|emb|CBI37846.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|449524832|ref|XP_004169425.1| PREDICTED: LOW QUALITY PROTEIN: probable protein phosphatase 2C 60-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query399
TAIR|locus:2121234400 AT4G38520 [Arabidopsis thalian 0.914 0.912 0.756 5.8e-153
TAIR|locus:2081770379 AT3G51370 [Arabidopsis thalian 0.877 0.923 0.770 1.8e-151
TAIR|locus:2156877385 AT5G66080 [Arabidopsis thalian 0.884 0.916 0.776 1.8e-151
TAIR|locus:2097238384 AT3G55050 [Arabidopsis thalian 0.877 0.911 0.678 6.4e-131
TAIR|locus:2091265385 AT3G12620 [Arabidopsis thalian 0.872 0.903 0.690 2.2e-130
TAIR|locus:2151256370 AT5G02760 [Arabidopsis thalian 0.854 0.921 0.634 2.8e-114
TAIR|locus:2086097384 AT3G17090 [Arabidopsis thalian 0.794 0.825 0.623 7.8e-110
TAIR|locus:2170234393 AT5G06750 [Arabidopsis thalian 0.839 0.852 0.567 5.4e-102
TAIR|locus:2118899380 AT4G33920 [Arabidopsis thalian 0.844 0.886 0.560 1.1e-101
TAIR|locus:2041444856 POL "poltergeist" [Arabidopsis 0.416 0.193 0.365 6.3e-37
TAIR|locus:2121234 AT4G38520 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1492 (530.3 bits), Expect = 5.8e-153, P = 5.8e-153
 Identities = 276/365 (75%), Positives = 318/365 (87%)

Query:    31 GRQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGH 90
             GRQ+GLLW++DSG HV G+FSMAVVQAN+LLEDQSQ+ESGSLS+H+ GP+GTFVGVYDGH
Sbjct:    29 GRQEGLLWFRDSGQHVFGDFSMAVVQANSLLEDQSQLESGSLSSHDSGPFGTFVGVYDGH 88

Query:    91 GGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAV 150
             GGPETSR+INDH+F HLKRFT++QQ MS++VI+KA+QATEEGF+S+VT Q+  +PQIA V
Sbjct:    89 GGPETSRFINDHMFHHLKRFTAEQQCMSSEVIKKAFQATEEGFLSIVTNQFQTRPQIATV 148

Query:   151 GSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALH 210
             GSCCLV VIC G LY+AN GDSRAVLG+V++ TGE  A QLS EHNA IESVR+ELQALH
Sbjct:   149 GSCCLVSVICDGKLYVANAGDSRAVLGQVMRVTGEAHATQLSAEHNASIESVRRELQALH 208

Query:   211 PDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADP 270
             PD   IVVLKHNVWRVKG+IQVSRSIGDVYLK++EFNREPLY KFRLR P  +P+LSA+P
Sbjct:   209 PDHPDIVVLKHNVWRVKGIIQVSRSIGDVYLKRSEFNREPLYAKFRLRSPFSKPLLSAEP 268

Query:   271 SISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREM 330
             +I+VH L+PHDQF+I ASDGLWEH+SNQEAVDIVQNHP++G A+RLVK ALQEAAKKREM
Sbjct:   269 AITVHTLEPHDQFIICASDGLWEHMSNQEAVDIVQNHPRNGIAKRLVKVALQEAAKKREM 328

Query:   331 RYSDLKKIDRGVRRHFHDDITVIVVFLDXXXXXXXXXXXXPNVSVRGGGITLPHNTLAPC 390
             RYSDLKKIDRGVRRHFHDDITVIVVF D            P VSVRG G+ LPHNTLAPC
Sbjct:   329 RYSDLKKIDRGVRRHFHDDITVIVVFFDTNLVSRGSMLRGPAVSVRGAGVNLPHNTLAPC 388

Query:   391 TMPTE 395
             T PT+
Sbjct:   389 TTPTQ 393
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
TAIR|locus:2081770 AT3G51370 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2156877 AT5G66080 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2097238 AT3G55050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2091265 AT3G12620 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2151256 AT5G02760 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2086097 AT3G17090 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2170234 AT5G06750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118899 AT4G33920 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041444 POL "poltergeist" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9FKX4P2C79_ARATH3, ., 1, ., 3, ., 1, 60.79660.88470.9168nono
Q5PNS9P2C64_ARATH3, ., 1, ., 3, ., 1, 60.76150.92480.9225yesno
Q9SD12P2C46_ARATH3, ., 1, ., 3, ., 1, 60.78470.87710.9234nono
Q7XCJ7P2C72_ORYSJ3, ., 1, ., 3, ., 1, 60.750.90970.9236nono
Q5Z8P0P2C60_ORYSJ3, ., 1, ., 3, ., 1, 60.80770.89970.9158nono
Q9LHJ9P2C38_ARATH3, ., 1, ., 3, ., 1, 60.70770.87210.9038nono
Q10S32P2C28_ORYSJ3, ., 1, ., 3, ., 1, 60.78040.92480.9248yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_Genewise1_v1.C_LG_IV1258
hypothetical protein (397 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 6e-65
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-64
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 5e-43
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 2e-22
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 1e-18
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 3e-11
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  207 bits (529), Expect = 6e-65
 Identities = 92/312 (29%), Positives = 139/312 (44%), Gaps = 65/312 (20%)

Query: 50  FSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKR 109
                       ED   ++    +       G   GV+DGHGG     + +  L + L  
Sbjct: 4   GVSDKGGDRKTNEDAVVIKPNLNNED-----GGLFGVFDGHGGHAAGEFASKLLVEELLE 58

Query: 110 FTSDQ----QSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLY 165
              +     +    + +RKA+   +E  +         +P  A  G+  +V +I G  LY
Sbjct: 59  ELEETLTLSEEDIEEALRKAFLRADEEILEEAQ----DEPDDARSGTTAVVALIRGNKLY 114

Query: 166 IANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWR 225
           +AN+GDSRAVL R  +A      +QL+ +H    E  R+ ++      S          R
Sbjct: 115 VANVGDSRAVLCRNGEA------VQLTKDHKPVNEEERERIEKAGGRVSN--------GR 160

Query: 226 VKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVI 285
           V G++ V+R++GD  LK                     P +SA+P ++V +L   D F+I
Sbjct: 161 VPGVLAVTRALGDFDLK---------------------PGVSAEPDVTVVKLTEDDDFLI 199

Query: 286 FASDGLWEHLSNQEAVDIVQNHPQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRH 345
            ASDGLW+ LSNQEAVDIV++              LQEAA++       L  +D  +RR 
Sbjct: 200 LASDGLWDVLSNQEAVDIVRSELAKED--------LQEAAQE-------L--VDLALRRG 242

Query: 346 FHDDITVIVVFL 357
            HD+ITV+VV L
Sbjct: 243 SHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 399
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.91
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.81
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.77
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.7
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.48
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.35
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 97.98
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-64  Score=483.69  Aligned_cols=302  Identities=53%  Similarity=0.862  Sum_probs=280.1

Q ss_pred             CCCCeeeecCCCCcccceeeeeeecCCCCCcchhhhccCccccCCC-CCceEEEEEecCCCchHHHHHHHHHHHHHHHH-
Q 015823           32 RQDGLLWYKDSGHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEF-GPYGTFVGVYDGHGGPETSRYINDHLFQHLKR-  109 (399)
Q Consensus        32 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ED~~~v~~~~~~~~~~-~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~-  109 (399)
                      ..++++|+++...+..|++++++.+.++.++|...++.++...... .+.++|+||||||||++|++|++++|+.++.. 
T Consensus        49 ~~~~~~~~~~~~~~~~~d~~~~v~~~n~~q~a~~~~~edrv~~~~s~~~~~~fvGIyDGhgGp~as~~v~~~L~~~v~~~  128 (390)
T KOG0700|consen   49 SVDGLLWYKDRSEHSFGDFSMAVLQANNLQEAQGKAEEDRVSVAVSEENGWLFVGIYDGHGGPDASRFLSDHLYPYVARE  128 (390)
T ss_pred             CcccccccccccccCcccchhhhhhhhhhhhhcCCcccCcceeeeeccCCeEEEEEecCCCCccHHHHHHHHHHHHHHHH
Confidence            6688999999999999999999999998889998888777766555 67789999999999999999999999999872 


Q ss_pred             -----------hhhc--------------------c-CCchHHHHHHHHHHHHHHHHHHhhhcCCCCCCcccccceEEEE
Q 015823          110 -----------FTSD--------------------Q-QSMSADVIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVG  157 (399)
Q Consensus       110 -----------~~~~--------------------~-~~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~  157 (399)
                                 +..+                    . .....++|.+||.+++++|...+.+.+...|+.+.+||||+|+
T Consensus       129 L~~~~~~~~~~f~~e~~~~~~~~~~~~~~~~~~~~~~~~~v~~al~~Af~~tee~fl~~v~~~~~~~p~lA~~GSC~Lv~  208 (390)
T KOG0700|consen  129 LQGLLWQDEERFPSEYKSEELEHLLVYWKQLSSADQRHGDVLEALSKAFEATEEDFLEMVDKQLQENPELALVGSCCLVG  208 (390)
T ss_pred             hhhhhhhhccccccccccchhhhhhhhhhcccccCccchhHHHHHHHHHHHHHHHHHHHHHHhhccchhhhhhcceEEEE
Confidence                       2222                    1 3557789999999999999999999999999999999999999


Q ss_pred             EEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHcCCCCCCeEEEeCCeeeecCccccccccc
Q 015823          158 VICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIG  237 (399)
Q Consensus       158 ~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~rv~G~l~vtRalG  237 (399)
                      ++.+..|||||+|||||+|++....++.+.++|||.||+.+++.|+.||+..||+++.+++.++  |||+|.|++|||||
T Consensus       209 ~i~~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~--~RvkG~L~vsRAfG  286 (390)
T KOG0700|consen  209 LIKGGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKH--WRVKGILQVSRAFG  286 (390)
T ss_pred             EEeCCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeecc--ceeeEEEEeeeecc
Confidence            9999999999999999999987544444799999999999999999999999999999999988  99999999999999


Q ss_pred             cccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCCCcccCCHHHHHHHHHc-----CCCchH
Q 015823          238 DVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQN-----HPQSGS  312 (399)
Q Consensus       238 d~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDGlwd~ls~~ei~~iv~~-----~~~~~~  312 (399)
                      |.+||+..++.+|++.+|+++.++++||++++|+|+.++|.|.|+|||||||||||+|++||++++|..     .+++++
T Consensus       287 d~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~~pd~~~  366 (390)
T KOG0700|consen  287 DGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGKFPDGNP  366 (390)
T ss_pred             ceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccCCCCCCH
Confidence            999999999999999999999999999999999999999999999999999999999999999999998     788999


Q ss_pred             HHHHHHHHHHHHHHhhhhhhhhh
Q 015823          313 ARRLVKAALQEAAKKREMRYSDL  335 (399)
Q Consensus       313 a~~Lv~~al~~~a~~~~~~~~~l  335 (399)
                      |+.||+.|+.+++++++|++++|
T Consensus       367 A~hLIr~aL~~aakk~~~r~s~l  389 (390)
T KOG0700|consen  367 ATHLIRHALGRAAKKRGMRLSDL  389 (390)
T ss_pred             HHHHHHHHHhhhhhhccccHhhc
Confidence            99999999999999999999876

>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-20
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-20
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-20
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 4e-19
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 5e-19
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 4e-17
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 8e-16
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 8e-16
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 9e-16
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 9e-16
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 9e-16
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 9e-16
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 2e-13
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 3e-11
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 4e-11
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 4e-11
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-07
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 2e-07
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 6e-07
2pom_A372 Tab1 With Manganese Ion Length = 372 2e-05
2j4o_A401 Structure Of Tab1 Length = 401 2e-05
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure 
Iteration: 1

 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/306 (27%), Positives = 144/306 (47%), Gaps = 50/306 (16%)
Query: 66  QVESGSLSTHEFGPYGT--FVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSAD--- 120
           Q  SGS+    F P     F GVYDGHGG + + Y  + +   L    + ++ M +D   
Sbjct: 35  QSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYCRERMHLALAEEIAKEKPMLSDGDT 94
Query: 121 VIRKAYQATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVV 180
            + K  +A    F+ + ++   + P+   VGS  +V V+    +++AN GDSRAVL R  
Sbjct: 95  WLEKWKKALFNSFLRVDSEIESVAPE--TVGSTSVVAVVFPSHIFVANCGDSRAVLCR-- 150
Query: 181 KATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVY 240
              G+  A+ LS +H        +E +A   + +   V++ N  RV G++ +SRSIGD Y
Sbjct: 151 ---GKT-ALPLSVDHKP-----DREDEAARIEAAGGKVIQWNGARVFGVLAMSRSIGDRY 201
Query: 241 LKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEA 300
           LK                     P +  DP ++  +    D  +I ASDG+W+ ++++EA
Sbjct: 202 LK---------------------PSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEA 240
Query: 301 VDIV--------QNHPQSGSARRLVKAALQEAAKKREMRYSD-LKKIDRGVRRHFHDDIT 351
            ++         + +  +G A  L     +E      M  ++ L K+   ++R   D+I+
Sbjct: 241 CEMARKRILLWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKL--AIQRGSKDNIS 298
Query: 352 VIVVFL 357
           V+VV L
Sbjct: 299 VVVVDL 304
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 2e-89
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 4e-06
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 1e-88
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 3e-56
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-55
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 9e-54
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-53
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 2e-53
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 4e-53
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-52
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 2e-52
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 2e-51
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 1e-41
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 2e-32
1txo_A237 Putative bacterial enzyme; serine/threonine protei 5e-10
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 2e-09
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 3e-09
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 6e-08
3rnr_A211 Stage II sporulation E family protein; structural 7e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-08
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
 Score =  277 bits (708), Expect = 2e-89
 Identities = 89/387 (22%), Positives = 152/387 (39%), Gaps = 69/387 (17%)

Query: 43  GHHVSGEFSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDH 102
              +    +++++    LLE ++ VESG        P   +    + +   E S+   + 
Sbjct: 85  SERLFYYIAVSLLPHETLLEIENAVESGRA----LLPILQWHKHPNDYFSKEASKLYFNG 140

Query: 103 LFQHLKRFTSDQQSMSADVI-----------RKAYQATEEGFMSLVTKQWPMKPQIAAVG 151
           L  + +         SAD+                 + E       +    +  ++A  G
Sbjct: 141 LRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSG 200

Query: 152 SCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHP 211
           +   V  + G  L++AN GDSRA+LG   +  G   A+ LS +HNA  E   Q L+  HP
Sbjct: 201 ATACVAHVDGVDLHVANTGDSRAMLGVQ-EEDGSWSAVTLSNDHNAQNERELQRLKLEHP 259

Query: 212 DDSQIVVLKHNVWRVKGLIQVSRSIGDVYLK------------KAEFNREPLYIKFRLRE 259
            +    V+K +  R+ GL+   R+ GDV  K              +   +  Y KF    
Sbjct: 260 KNEAKSVVKQD--RLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPN 317

Query: 260 PIKRPILSADPSISVHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNH------------ 307
               P L+A+P ++ H+L+P D+F++ A+DGLWE +  Q+ V IV  +            
Sbjct: 318 YHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAV 377

Query: 308 -------------------------PQSGSARRLVKAAL--QEAAKKREMRYSDLKKIDR 340
                                        +A  L++ A+   E       R S +  +  
Sbjct: 378 GGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPE 437

Query: 341 GVRRHFHDDITVIVVFLDSSLVSRASS 367
            + R + DDIT+IVV  +S +V    +
Sbjct: 438 ELARMYRDDITIIVVQFNSHVVGAYQN 464
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query399
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.79
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.76
3f79_A255 Probable two-component response regulator; adaptor 99.63
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.55
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.05
3eq2_A394 Probable two-component response regulator; adaptor 98.13
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
Probab=100.00  E-value=7.3e-52  Score=419.91  Aligned_cols=306  Identities=29%  Similarity=0.453  Sum_probs=216.9

Q ss_pred             eeeeeecCCCCCcchhhhccCccccCCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhh------hc----------
Q 015823           50 FSMAVVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFT------SD----------  113 (399)
Q Consensus        50 ~s~~~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~------~~----------  113 (399)
                      |.....+.|..|||++.+...      ..+.+.||||||||||+.+|++|+++|+.+|...+      .+          
T Consensus        41 ~~s~~g~~R~~nED~~~v~~~------~~~~~~lfgVfDGHGG~~aa~~as~~L~~~i~~~l~~~~~l~~~~~~~~~~~~  114 (467)
T 2pnq_A           41 FDSNRLPANAPIEDRRSATTC------LQTRGMLLGVFDGHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAVESGRA  114 (467)
T ss_dssp             EEEEEECCSSSCCEEEEEEEE------SSSSCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHCCHHHHHHHHTTTC----
T ss_pred             EEeeccCCCCCCCCceeeeec------cCCCcEEEEEECCCCCHHHHHHHHHHHHHHHHHhhcchhhhhhhhhhhhcccc
Confidence            455677789999999876321      11346899999999999999999999998886431      00          


Q ss_pred             ------------------------------------------cCCchHHHHHHHHHHHHHHHHHHhhhcCC------CCC
Q 015823          114 ------------------------------------------QQSMSADVIRKAYQATEEGFMSLVTKQWP------MKP  145 (399)
Q Consensus       114 ------------------------------------------~~~~~~~~l~~a~~~~~~~l~~~~~~~~~------~~~  145 (399)
                                                                ......++|+++|.++++.|.........      ..+
T Consensus       115 ~~~~l~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~  194 (467)
T 2pnq_A          115 LLPILQWHKHPNDYFSKEASKLYFNGLRTYWQELIDLNTGESADIDVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVL  194 (467)
T ss_dssp             CCCCEEECCCTTCCCCSTTHHHHHHHHHHHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHH
T ss_pred             ccccccccccccccchhhhhhhhhcchhhhhhhhccccccccchhhHHHHHHHHHHHHHHHHHHhhhhcccccccccccc
Confidence                                                      00146789999999999999875432100      011


Q ss_pred             CcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHHHHcCCCCCCeEEEeCCeee
Q 015823          146 QIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQELQALHPDDSQIVVLKHNVWR  225 (399)
Q Consensus       146 ~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri~~~~~~~~~~~~~~~~~~r  225 (399)
                      ....+|||++++++.++++|||||||||+|+++. ..+|.+.+++||.||++.++.|++||.+.|+.........+  .|
T Consensus       195 ~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~-~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~--~R  271 (467)
T 2pnq_A          195 RVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQ-EEDGSWSAVTLSNDHNAQNERELQRLKLEHPKNEAKSVVKQ--DR  271 (467)
T ss_dssp             HHHHSEECEEEEEEETTEEEEEEESSCEEEEEEE-CTTSCEEEEECCCCCSTTCHHHHHHHHHTSCGGGHHHHBSS--SS
T ss_pred             cCCCCcceEEEEEEECCEEEEEECCCceEEEEEe-cCCCcEEEEECCCCCCCCCHHHHHHHHHcCCCcccceeEec--Cc
Confidence            2356999999999999999999999999999996 22344689999999999999999999999875432111122  39


Q ss_pred             ecCccccccccccccccccc----------cCC--chhhhhhccCCCCCCCccccCCceEEEEcCCCCeEEEEEcCCCcc
Q 015823          226 VKGLIQVSRSIGDVYLKKAE----------FNR--EPLYIKFRLREPIKRPILSADPSISVHQLQPHDQFVIFASDGLWE  293 (399)
Q Consensus       226 v~G~l~vtRalGd~~~k~~~----------~~~--~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~~~D~fLILaSDGlwd  293 (399)
                      ++|.+++||||||..+|+..          +..  ...+.++..+...++|+++++|+|..++|.++|.|||||||||||
T Consensus       272 v~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd  351 (467)
T 2pnq_A          272 LLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTYHRLRPQDKFLVLATDGLWE  351 (467)
T ss_dssp             BTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCSSSCCCBCCCEEEEEECCTTEEEEEEECHHHHT
T ss_pred             cccccccchhcCchhhcccchhhhhhhcccccccccccccccccccccCCCcccccceEEEEEcCCCCeEEEEEecCccc
Confidence            99999999999999998642          110  001134555666778999999999999999999999999999999


Q ss_pred             cCCHHHHHHHHHcCC-------------------------------------CchHHHHHHHHHHHHH--HHhhhhhhhh
Q 015823          294 HLSNQEAVDIVQNHP-------------------------------------QSGSARRLVKAALQEA--AKKREMRYSD  334 (399)
Q Consensus       294 ~ls~~ei~~iv~~~~-------------------------------------~~~~a~~Lv~~al~~~--a~~~~~~~~~  334 (399)
                      +|+++|++++|....                                     .+.+|..||+.|+..+  +.-+..+.++
T Consensus       352 ~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~  431 (467)
T 2pnq_A          352 TMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMSSVFEDQNAATHLIRHAVGNNEFGAVDHERLSK  431 (467)
T ss_dssp             TSCHHHHHHHHHHHHTTCSSCC-------------------------------CCHHHHHHHHHHC--------------
T ss_pred             cCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhcccCCchhhHHHHHHHHHHhcCCCcCcchHHHHHh
Confidence            999999999996531                                     1567899999999775  2122334467


Q ss_pred             hhccccccCCccCCceEEEEEEcCCCcccc
Q 015823          335 LKKIDRGVRRHFHDDITVIVVFLDSSLVSR  364 (399)
Q Consensus       335 l~~~~~~~~r~~~DNiTvivv~l~~~~~~~  364 (399)
                      |..|+.+++|+++||||||||+|+.+.+.+
T Consensus       432 ll~~~~~~~R~~~DdITViVv~~~~~~~~~  461 (467)
T 2pnq_A          432 MLSLPEELARMYRDDITIIVVQFNSHVVGA  461 (467)
T ss_dssp             -----------CCSCEEEEEEEECHHHHHH
T ss_pred             hhcCCccccccCCCCcEEEEEEeCchHhhh
Confidence            899999999999999999999998765443
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 399
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 4e-33
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 2e-18
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (310), Expect = 4e-33
 Identities = 59/282 (20%), Positives = 108/282 (38%), Gaps = 46/282 (16%)

Query: 83  FVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQSMSADVIRKAYQATEEGFMSLVTKQWP 142
           F  VYDGH G + ++Y  +HL  H+      + S  A  +         GF+ +      
Sbjct: 54  FFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRV 113

Query: 143 M---KPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACI 199
           M   K      GS  +  +I     Y  N GDSR +L R  K          + +H    
Sbjct: 114 MSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKV------HFFTQDHKPSN 167

Query: 200 ESVRQELQALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLRE 259
              ++ +Q               + RV G + VSR++GD   K                 
Sbjct: 168 PLEKERIQNAGG--------SVMIQRVNGSLAVSRALGDFDYKCVHGK------------ 207

Query: 260 PIKRPILSADPSIS-VHQLQPHDQFVIFASDGLWEHLSNQEAVDIVQNHPQSGSARRLVK 318
                ++S +P +  + + +  DQF+I A DG+W+ + N+E  D V++  +         
Sbjct: 208 GPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTD------ 261

Query: 319 AALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSS 360
             L++   +          +D  + +   D+++VI++   ++
Sbjct: 262 -DLEKVCNEV---------VDTCLYKGSRDNMSVILICFPNA 293
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query399
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-49  Score=377.63  Aligned_cols=253  Identities=24%  Similarity=0.370  Sum_probs=203.0

Q ss_pred             eecCCCCCcchhhhccCccccCCCCCceEEEEEecCCCchHHHHHHHHHHHHHHHHhhhccC-------CchHHHHHHHH
Q 015823           54 VVQANNLLEDQSQVESGSLSTHEFGPYGTFVGVYDGHGGPETSRYINDHLFQHLKRFTSDQQ-------SMSADVIRKAY  126 (399)
Q Consensus        54 ~~~~~~~~ED~~~v~~~~~~~~~~~~~~~l~gV~DGhGG~~as~~a~~~l~~~l~~~~~~~~-------~~~~~~l~~a~  126 (399)
                      ..+.|..|||++.+...   .....++..||||||||||+.+|++|+++|+..|.+......       ....++|+++|
T Consensus        28 ~~G~R~~~ED~~~~~~~---~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~al~~a~  104 (295)
T d1a6qa2          28 MQGWRVEMEDAHTAVIG---LPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGF  104 (295)
T ss_dssp             EEETSSSCCEEEEEEEE---ETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHHHHHHHHHH
T ss_pred             CccCCCcccCeeEEEcc---cCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHH
Confidence            34568899999877432   122334568999999999999999999999999876432211       23567788888


Q ss_pred             HHHHHHHHHHhhhcCCCCCCcccccceEEEEEEeCCEEEEEEcCCceeEEEEEeccCCceEEEEccCCCCCCCHHHHHHH
Q 015823          127 QATEEGFMSLVTKQWPMKPQIAAVGSCCLVGVICGGTLYIANLGDSRAVLGRVVKATGEVLAIQLSTEHNACIESVRQEL  206 (399)
Q Consensus       127 ~~~~~~l~~~~~~~~~~~~~~~~~GtT~~v~~i~~~~l~vAnvGDSRa~l~r~~~~~~~~~~~~LT~dH~~~~~~e~~ri  206 (399)
                      ..+++.+........    ....+|||++++++.++++|||||||||+|++++      +.+++||.||++.++.|++||
T Consensus       105 ~~~~~~~~~~~~~~~----~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~------~~~~~lT~dH~~~~~~E~~Ri  174 (295)
T d1a6qa2         105 LEIDEHMRVMSEKKH----GADRSGSTAVGVLISPQHTYFINCGDSRGLLCRN------RKVHFFTQDHKPSNPLEKERI  174 (295)
T ss_dssp             HHHHHHHHHHHHHTT----CCCCCEECEEEEEECSSEEEEEEESSCEEEEEET------TEEEEECCCCCTTSHHHHHHH
T ss_pred             HHHHHHHhhhhhhcc----CcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeec------ccceeeccccCcccHHHHhhH
Confidence            888888776544332    2367899999999999999999999999999996      899999999999999999999


Q ss_pred             HHcCCCCCCeEEEeCCeeeecCccccccccccccccccccCCchhhhhhccCCCCCCCccccCCceEEEEcC-CCCeEEE
Q 015823          207 QALHPDDSQIVVLKHNVWRVKGLIQVSRSIGDVYLKKAEFNREPLYIKFRLREPIKRPILSADPSISVHQLQ-PHDQFVI  285 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~rv~G~l~vtRalGd~~~k~~~~~~~~~~~~~~~~~~~~~p~v~~~Pdi~~~~l~-~~D~fLI  285 (399)
                      .+.++.    +.    .+|++|.|++||||||..+|..+...            ...++++++|++..+++. ++|.|||
T Consensus       175 ~~~gg~----v~----~~r~~g~l~~tRa~Gd~~~k~~~~~~------------~~~~~v~~~Pdi~~~~~~~~~~~flv  234 (295)
T d1a6qa2         175 QNAGGS----VM----IQRVNGSLAVSRALGDFDYKCVHGKG------------PTEQLVSPEPEVHDIERSEEDDQFII  234 (295)
T ss_dssp             HHTTCC----EE----TTEETTTBSCSBCEECGGGSCCTTCC------------GGGSSSBCCCEEEEEECCTTTEEEEE
T ss_pred             hhcCCc----cc----ccccCCceeeeeccCcHHhhhccccC------------cccccccccccceEEEeecccceeEe
Confidence            998742    21    23899999999999999998764221            234679999999999986 5578999


Q ss_pred             EEcCCCcccCCHHHHHHHHHcC-----CCchHHHHHHHHHHHHHHHhhhhhhhhhhccccccCCccCCceEEEEEEcCCC
Q 015823          286 FASDGLWEHLSNQEAVDIVQNH-----PQSGSARRLVKAALQEAAKKREMRYSDLKKIDRGVRRHFHDDITVIVVFLDSS  360 (399)
Q Consensus       286 LaSDGlwd~ls~~ei~~iv~~~-----~~~~~a~~Lv~~al~~~a~~~~~~~~~l~~~~~~~~r~~~DNiTvivv~l~~~  360 (399)
                      ||||||||+|+++|++++++..     ..+.+|++|++.|+.                     |+++||||||||+|+..
T Consensus       235 L~SDGl~d~l~~~ei~~~v~~~~~~~~~~~~~a~~Lv~~A~~---------------------~gs~DNiTvivv~~~~~  293 (295)
T d1a6qa2         235 LACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLY---------------------KGSRDNMSVILICFPNA  293 (295)
T ss_dssp             EECHHHHTTSCHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHH---------------------TTCCSCEEEEEEECTTS
T ss_pred             eecCcccccCCHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHh---------------------cCCCCCeEEEEEeccCC
Confidence            9999999999999999999753     235677888877763                     46789999999999865
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure