Citrus Sinensis ID: 015826

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
Protein Sequence
MENLNLQWRLLPTLTLLAASLFLLVFKDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGYI
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEccEEEcccccEEEEEEEEccEEEEEccccccccccccccEEEccccEEcccccccccccccccccccccHHHHHHHHHHccccEEEccccccccccccHHHHHHHHHHHccccEEEEEEEEEEEcccccccHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHHHHHcccccEEEccccccccHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccEEEEEEccccHHHHHHHHHHHHccccEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHcccccEEccccccccHHHHcccccccccccccccHHHcccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccEEEEccEEEcccccEEEEEEEEccEEEEEcccccccccccccEEEEccccEEEcccccccccccccccccccccccHHHHHHHcccEEEEEcccccccccccHHHHHHHHHHHHcccEEEEEEEEEEEcccccHHHHHHHHHHHcccEEHHEEccccccccccccHHHHHHHHHHHHHccccEEEEEcccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccEEEEEEccHHHHHHHHHHHHHcccEEEEEccccEEEEcHHHcccccccEEcccccccHccHHHHHHHHHcccEEEEEEccccccHHHHHcccccccccccccccHHHHcc
Coil and Loop (DISEMBL)
menlnlqwRLLPTLTLLAASLFLLVFKdsaklshsecsllpynqywltskrivtpkgvisgaveikegniisivseedwprnsktgqvvdygeavimpglidvhahlddpgrtewegfpsgtkaaaaggittlidmplnsdpstisteTLKLKVDAAEKRIYVdvgfwgglvpenaYNASALEALLNAGVLglksfmcpsgindfpmtnasHIKEGLSVLARYKRPLLVHaemekgserhvkleddtldtrsystylktrppsweEAAIRELLTVAKdtrtdgpaegaHLHIVHLSDASSSLDLLMEAktngdsitvetcphylafsaeeipdgdtrfkcappirdAANKEKLWEALMDGHIdmlssdhsptvpelklldegnflkawggisslqvgyi
Flexible Loop (DISEMBL)
MENLNLQWRLLPTLTLLAASLFLLVFKDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIIsivseedwprnsKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHaemekgserhvkleddtldtrsystylktrppsweeaAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSaeeipdgdtRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKawggisslqvgyi
Low Complexity Region (SEG)
MENlnlqwrllptltllaaslfllVFKDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSgtkaaaaggittLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHlsdasssldllMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGYI
Disordered region (IsUnstruct)
****NLQWRLLPTLTLLAASLFLLVFKDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL******ISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA***********************TYL******WEEAAIRELLTVAK*********GAHLHIVHLSDA**SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDML*******VPELKLLDEGNFLKAWGGISSLQV***
Disordered Region (DISOPRED)
**NLNLQWRLLPTLTLLAASLFLLVFKDS**********LPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER***********RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGYI
Disordered Region (DISEMBL)
MENLNLQWRLLPTLTLLAASLFLLVFKDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGYI
Disordered Region (DISPRO)
*ENLNLQWRLLPTLTLLAASLFLLVFKDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGYI
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MENLNLQWRLLPTLTLLAASLFLLVFKDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGYI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	399	2.2.26 [Sep-21-2011]
P32375	460	Allantoinase OS=Saccharom	yes	no	0.734	0.636	0.453	2e-73
Q9RKU5	445	Allantoinase OS=Streptomy	yes	no	0.824	0.739	0.437	1e-71
Q82LL4	445	Allantoinase OS=Streptomy	yes	no	0.822	0.737	0.435	2e-71
P40757	484	Allantoinase, mitochondri	N/A	no	0.832	0.685	0.434	2e-71
Q54SV3	649	Probable allantoinase 1 O	yes	no	0.847	0.520	0.406	7e-71
Q55C91	510	Probable allantoinase 2 O	no	no	0.869	0.680	0.389	7e-64
Q9RV76	448	Allantoinase OS=Deinococc	yes	no	0.817	0.727	0.383	1e-62
Q5WBJ6	448	Allantoinase OS=Bacillus	yes	no	0.819	0.729	0.382	4e-60
Q9KAH8	438	Allantoinase OS=Bacillus	yes	no	0.789	0.719	0.391	2e-58
B7N966	453	Allantoinase OS=Escherich	yes	no	0.714	0.629	0.388	7e-58

>sp|P32375|ALN_YEAST Allantoinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DAL1 PE=3 SV=2

 Score =  276 bits (707), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 138/304 (45%), Positives = 199/304 (65%), Gaps = 11/304 (3%)

Query: 94  AVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLK 153
             I+PGL+D H HL++PGRT WEGF +GT+AA +GG+TT++DMPLN+ P T + E  ++K
Sbjct: 60  CTILPGLVDSHVHLNEPGRTSWEGFETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIK 119

Query: 154 VDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHI 213
           ++AAE +++ DVGFWGGLVP   +N   L  L+ AGV G K F+  SG+ +FP     +I
Sbjct: 120 LEAAEGQMWCDVGFWGGLVP---HNLPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYI 176

Query: 214 KEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELL 273
           +E L VLA     ++ HAE+ K  E   + E      R YS++L +RP S+E  AI  +L
Sbjct: 177 EEALKVLAEEDTMMMFHAELPKAHEDQQQPEQ---SHREYSSFLSSRPDSFEIDAINLIL 233

Query: 274 TVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD 333
              +    +GP     +HIVHL+ +  ++ L+ +A+ +G  +T ETC HYL  +AE+IPD
Sbjct: 234 ECLR--ARNGPV--PPVHIVHLA-SMKAIPLIRKARASGLPVTTETCFHYLCIAAEQIPD 288

Query: 334 GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISS 393
           G T FKC PPIR  +N++ LW+AL +G I  + SDHSP  PELK L +G+F  +WGGI+S
Sbjct: 289 GATYFKCCPPIRSESNRQGLWDALREGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIAS 348

Query: 394 LQVG 397
           + +G
Sbjct: 349 VGLG 352

Utilization of purines as secondary nitrogen sources, when primary sources are limiting.
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)
EC: 3EC: .EC: 5EC: .EC: 2EC: .EC: 5

>sp|Q9RKU5|ALLB_STRCO Allantoinase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=allB PE=3 SV=1

 Score =  270 bits (691), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 153/350 (43%), Positives = 220/350 (62%), Gaps = 21/350 (6%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAH 106
           L S R++TP+G  + +V +  G  I+ V   D P  +   ++ D G+ V++PGL+D H H
Sbjct: 8   LRSTRVITPEGTRAASVAVT-GEKITAVLPYDAPVPAG-ARLEDVGDHVVLPGLVDTHVH 65

Query: 107 LDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVG 166
           ++DPGRTEWEGF + T+AAAAGGITTL+DMPLNS P T + + L+ K + A  + ++DVG
Sbjct: 66  VNDPGRTEWEGFWTATRAAAAGGITTLVDMPLNSIPPTTTVDNLRTKREVAADKAHIDVG 125

Query: 167 FWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP 226
           FWGG +P+N  +   L  L  AGV G K+F+ PSG+++FP  +   +   L+ +A +   
Sbjct: 126 FWGGALPDNVKD---LRPLHEAGVFGFKAFLSPSGVDEFPHLDQEQLARSLAEIAAFDGL 182

Query: 227 LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAE 286
           L+VHAE     + H            Y+ +L +RP   E+ AI  LL  AK         
Sbjct: 183 LIVHAE-----DPHHLAAAPQQGGPKYTHFLASRPRDAEDTAIATLLAQAKRFN------ 231

Query: 287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD 346
            A +H++HLS +S +L L+ EA+ +G  +TVETCPHYL  +AEE+PDG + FKC PPIR+
Sbjct: 232 -ARVHVLHLS-SSDALPLIAEARADGVRVTVETCPHYLTLTAEEVPDGASEFKCCPPIRE 289

Query: 347 AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQV 396
           AAN++ LW+AL DG ID + +DHSP+  +LK  D   F  AWGGI+ LQ+
Sbjct: 290 AANQDLLWQALADGTIDCVVTDHSPSTADLKTDD---FATAWGGIAGLQL 336

Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring.

Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) (taxid: 100226)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 5

>sp|Q82LL4|ALLB_STRAW Allantoinase OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) GN=allB PE=3 SV=1

 Score =  270 bits (689), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/351 (43%), Positives = 219/351 (62%), Gaps = 23/351 (6%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEE-DWPRNSKTGQVVDYGEAVIMPGLIDVHA 105
           L S R++TP+G    AV +  G I +++  + + P  ++   + D G+ V++PGL+D H 
Sbjct: 8   LRSTRVITPEGTRPAAVAVAAGKITAVLPHDAEVPAGAR---LEDLGDDVLLPGLVDTHV 64

Query: 106 HLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV 165
           H++DPGRT WEGF + T+AAAAGGITTL+DMPLNS P T +   L+ K D A  + ++DV
Sbjct: 65  HVNDPGRTHWEGFWTATRAAAAGGITTLVDMPLNSLPPTTTVGNLRTKRDVAADKAHIDV 124

Query: 166 GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR 225
           GFWGG +P+N  +   L  L +AGV G K+F+ PSG+++FP  +   +   ++ +A +  
Sbjct: 125 GFWGGALPDNVKD---LRPLHDAGVFGFKAFLSPSGVDEFPELDQERLARSMAEIAGFGG 181

Query: 226 PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285
            L+VHAE       H+         R Y+ +L +RP   E+ AI  LL  AK        
Sbjct: 182 LLIVHAE----DPHHLAAAPQRGGPR-YTDFLASRPRDAEDTAIANLLAQAKRL------ 230

Query: 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIR 345
             A +H++HLS +S +L L+  AK  G  +TVETCPHYL  +AEE+PDG + FKC PPIR
Sbjct: 231 -NARVHVLHLS-SSDALPLIAGAKAEGVRVTVETCPHYLTLTAEEVPDGASEFKCCPPIR 288

Query: 346 DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQV 396
           +AAN++ LW+AL DG ID + +DHSP+  +LK  D   F  AWGGIS LQ+
Sbjct: 289 EAANQDLLWQALADGTIDCVVTDHSPSTADLKTDD---FATAWGGISGLQL 336

Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring.

Streptomyces avermitilis (taxid: 33903)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 5

>sp|P40757|ALN_LITCT Allantoinase, mitochondrial OS=Lithobates catesbeiana GN=ALN PE=1 SV=1

 Score =  269 bits (688), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 153/352 (43%), Positives = 218/352 (61%), Gaps = 20/352 (5%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTG-QVVDYGEAVIMPGLIDVHA 105
           + SKR++    + S  + I +G I S+++   W ++  +G +++D G+ V+M G+ID H 
Sbjct: 21  IRSKRVIQANTISSCDIIISDGKISSVLA---WGKHVTSGAKLLDVGDLVVMAGIIDPHV 77

Query: 106 HLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV 165
           H+++PGRT+WEG+ + T AAAAGGIT ++DMPLNS P T S      K+ AA+++ YVDV
Sbjct: 78  HVNEPGRTDWEGYRTATLAAAAGGITAIVDMPLNSLPPTTSVTNFHTKLQAAKRQCYVDV 137

Query: 166 GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR 225
            FWGG++P+N      L  +L AGV G K F+  SG+ +FP  + + +   +S L     
Sbjct: 138 AFWGGVIPDNQVE---LIPMLQAGVAGFKCFLINSGVPEFPHVSVTDLHTAMSELQGTNS 194

Query: 226 PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285
            LL HAE+E       K   +  D+  Y T+L +RP   E AA++ +  + +  +     
Sbjct: 195 VLLFHAELEIA-----KPAPEIGDSTLYQTFLDSRPDDMEIAAVQLVADLCQQYK----- 244

Query: 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIR 345
                HIVHLS A S L ++ +AK  G  +TVET  HYL+ S+E IP G T FKC PP+R
Sbjct: 245 --VRCHIVHLSSAQS-LTIIRKAKEAGAPLTVETTHHYLSLSSEHIPPGATYFKCCPPVR 301

Query: 346 DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG 397
              NKE LW AL+ GHIDM+ SDHSP  P+LKLL EG+++KAWGGISSLQ G
Sbjct: 302 GHRNKEALWNALLQGHIDMVVSDHSPCTPDLKLLKEGDYMKAWGGISSLQFG 353

Lithobates catesbeiana (taxid: 8400)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 5

>sp|Q54SV3|ALN1_DICDI Probable allantoinase 1 OS=Dictyostelium discoideum GN=allB1 PE=3 SV=1

 Score =  268 bits (684), Expect = 7e-71,   Method: Compositional matrix adjust.
 Identities = 147/362 (40%), Positives = 225/362 (62%), Gaps = 24/362 (6%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYG--EAVIMPGLIDVH 104
           +  K++V    +   ++ IK G II I   +D+    K    V     + VIM GL+D H
Sbjct: 10  IKGKKVVINGEIKPASILIKNGIIIDI---KDYSSEIKEEHEVLIEEEKLVIMGGLVDSH 66

Query: 105 AHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164
            H+++PGRTEWEGF S T AAA+GG+TT+IDMPLNS P T + E L+ K+++   ++ VD
Sbjct: 67  VHINEPGRTEWEGFLSATSAAASGGVTTIIDMPLNSSPVTTTFENLQTKIESMPGKLRVD 126

Query: 165 VGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK 224
           VG  GG++P N+   S +  +L  GV+G KSF+  SGI++FP      I+E ++V+ + K
Sbjct: 127 VGLLGGIIPGNSSEISRM--VLEGGVVGFKSFLVHSGIDEFPHVKEDDIQEAMNVMKKLK 184

Query: 225 RP-------LLVHAEMEKG-SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA 276
                    ++ HAE+E+   E   +L+ +  D + Y T+LK+RP   E  AI +++ + 
Sbjct: 185 DEQGGRDVVMMFHAEIEEPIKEATERLQRENADPKLYDTFLKSRPRVSENIAIDKVIELT 244

Query: 277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTN-GDSITVETCPHYLAFSAEEIPDGD 335
           K             HIVHLS +S +++ + EA  N G  IT ET  HYL F +E++P G+
Sbjct: 245 KKNMIK-------THIVHLS-SSDAIEAIHEAVHNDGVPITAETTYHYLYFESEQVPYGN 296

Query: 336 TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           T +KC PP+R++ NK+ LW+A+ +G I+++ SDHSP   +LKL+++G+F+KAWGGISSLQ
Sbjct: 297 TLYKCCPPVRESENKDLLWKAVTNGTINIIVSDHSPCTLDLKLIEQGDFMKAWGGISSLQ 356

Query: 396 VG 397
           +G
Sbjct: 357 LG 358

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 5

>sp|Q55C91|ALN2_DICDI Probable allantoinase 2 OS=Dictyostelium discoideum GN=allB2 PE=3 SV=1

 Score =  244 bits (624), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 154/395 (38%), Positives = 224/395 (56%), Gaps = 48/395 (12%)

Query: 39  LLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYG------ 92
            L +  + L++K       VI G   I  GN+I +       RN KT  + DY       
Sbjct: 12  FLLFQNFVLSAKNDDNKLKVIRGRNVIYNGNVIPL---SILIRNGKTIGIKDYSFNPKKL 68

Query: 93  -----------------EAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLID 135
                            + +IM GL+D H H+++PGRTEWEGF S T AAAAGG+TT++D
Sbjct: 69  NENYEILYDDRECNNNEDFIIMGGLVDSHVHVNEPGRTEWEGFESATSAAAAGGVTTIVD 128

Query: 136 MPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKS 195
           MPLNS P T S + L  K+++ + ++ VDVG  GG+VP N+     +  +L  GVLG KS
Sbjct: 129 MPLNSSPVTTSFKNLLDKIESMKGKLRVDVGLLGGIVPGNSKEIKKM--VLQGGVLGFKS 186

Query: 196 FMCPSGINDFPMTNASHIKEGLSVLARYKRP-------LLVHAEMEKG-SERHVKLEDDT 247
           F+ PSGI++FP  N + I+E ++ +   K         ++ HAE+E+   E  V+L+++ 
Sbjct: 187 FLLPSGIDEFPPVNENDIQEAMNEMKLLKCQYNNSDVIMMFHAEVEEPIKEATVRLKNEN 246

Query: 248 LDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLME 307
            D + Y TYL +RP   E  AI +L+ + +  +          HIVHLS +S S++ + E
Sbjct: 247 ADPKLYKTYLDSRPKISENQAISKLIDITRQNQI------VSTHIVHLS-SSESIEQIRE 299

Query: 308 AKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSS 367
           A   G  I+ ET  +YL  ++E +P G+T FK APP+R+  NKE LW A+++G I ++ S
Sbjct: 300 AMDQGVPISAETTYNYLHLTSESVPYGNTLFKSAPPVREHENKELLWNAIINGTIKLIVS 359

Query: 368 DHSPTVPELKLLDE-----GNFLKAWGGISSLQVG 397
           DHSP    LK L E     G+FLKAWGGISSL++G
Sbjct: 360 DHSPCTINLKQLKEDNQSIGDFLKAWGGISSLELG 394

Dictyostelium discoideum (taxid: 44689)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 5

>sp|Q9RV76|ALLB_DEIRA Allantoinase OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) GN=allB PE=3 SV=1

 Score =  240 bits (613), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/344 (38%), Positives = 191/344 (55%), Gaps = 18/344 (5%)

Query: 52  IVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG 111
           +VTP+G     + I  G I  +  E   P      Q +D     + PG++D H HL++PG
Sbjct: 12  LVTPEGERRADLGIVGGQIAELTDEIATP----AAQTLDVSGLHVFPGVLDDHVHLNEPG 67

Query: 112 RTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL 171
           RT WEGF +GT+A AAGG T+ +DMPLNS P  ++ E  + K    E++  +D G WGGL
Sbjct: 68  RTHWEGFETGTQALAAGGATSFLDMPLNSSPPVLTRERFEDKARLGEEKSLIDFGLWGGL 127

Query: 172 VPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231
            P    N   L+ L   GV+GLK+FM  SG+++FP  +   + EG+    R+   +  HA
Sbjct: 128 TP---LNLDQLDDLAECGVIGLKAFMSHSGLDEFPAADDLTLYEGMRTAKRHGLVVATHA 184

Query: 232 EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLH 291
           E  + + R  +             YL++RP   E  A++  L  A+DT       GA LH
Sbjct: 185 ESNEFTRRLTETA-RAQGKSGVRDYLESRPVVTELEAVQRALLFAQDT-------GAALH 236

Query: 292 IVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKE 351
           +VH+S + +++ L  E K  G  +T+ETCPHYL F+ E++       KCAPP+RD A +E
Sbjct: 237 LVHVS-SGAAVALAYEGKQKGIDVTIETCPHYLHFTGEDVERVGAALKCAPPLRDPAVQE 295

Query: 352 KLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           +LW  L+ GHID + SDHSP  P++K  +  +F   WGGIS  Q
Sbjct: 296 ELWRELLAGHIDTVGSDHSPAPPDMKTSE--DFFSLWGGISGAQ 337

Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring.

Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) (taxid: 243230)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 5

>sp|Q5WBJ6|ALLB_BACSK Allantoinase OS=Bacillus clausii (strain KSM-K16) GN=allB PE=3 SV=1

 Score =  232 bits (592), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 135/353 (38%), Positives = 200/353 (56%), Gaps = 26/353 (7%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQ-VVDYGEAVIMPGLIDVHA 105
           +T  R+V P GV    V I+ G I  I      P N K  + +++     + PG +D H 
Sbjct: 6   ITGGRVVLPSGVEETDVGIQAGKIARI-----GPINKKEARCIMNANGQYVFPGAVDTHV 60

Query: 106 HLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV 165
           H  +PGRTEWEGF +G+++ AAGG TT ++MPLN+ P+T +   L+ K++AA+ + YVD 
Sbjct: 61  HFSEPGRTEWEGFFTGSRSLAAGGTTTYVEMPLNALPATTNRANLQRKLEAAKGQNYVDY 120

Query: 166 GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN---DFPMTNASHIKEGLSVLAR 222
            F+GGLVP N +  + L A   +GV+  K F+ P G +   DF   + + ++ G+ +LA 
Sbjct: 121 SFYGGLVPTNLHELADLSA---SGVVAFKCFLSPCGSDIPGDFRNVDLNGLRAGMRLLAE 177

Query: 223 YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTD 282
             + L VHAE         +LE   L       Y+ +RP   E  A+ + L  A++T   
Sbjct: 178 KGQLLCVHAE---DPSMISQLEAKLLSPVGADAYVASRPVEAEVKAVCDTLAAARET--- 231

Query: 283 GPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAP 342
               G  +H VH+S ++++++ +  AK  G  +TVE+CPHY   SAEE+ +     KC P
Sbjct: 232 ----GCRIHFVHIS-SAAAIEAIERAKEEGVDVTVESCPHYFLLSAEELAELGPLAKCQP 286

Query: 343 PIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           P+R    + KLW  L+DG ID L+SDHSP  P+LK   +G+FL AWGGIS  Q
Sbjct: 287 PLRPKQEQAKLWACLLDGQIDWLASDHSPCTPDLK---DGDFLTAWGGISGCQ 336

Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring.

Bacillus clausii (strain KSM-K16) (taxid: 66692)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 5

>sp|Q9KAH8|ALLB_BACHD Allantoinase OS=Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) GN=allB PE=1 SV=1

 Score =  226 bits (577), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/335 (39%), Positives = 191/335 (57%), Gaps = 20/335 (5%)

Query: 63  VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT 122
           V I+ G I+S ++E     +S  G  +D     + PG++DVH H ++PGRTEWEGF SG+
Sbjct: 24  VAIRNG-IVSAITEPG-SISSDDGPAIDGTGLHLFPGMVDVHVHFNEPGRTEWEGFASGS 81

Query: 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASAL 182
           K+ AAGG+TT  DMPLNS+P TI+ E L  K   A ++  VD  FWGGLVP    N   L
Sbjct: 82  KSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPG---NIDHL 138

Query: 183 EALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK--GSERH 240
           + L + GV+G K+FM   G +DF  ++   + +G+  +A     L VHAE  +   +   
Sbjct: 139 QDLHDGGVIGFKAFMSECGTDDFQFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTT 198

Query: 241 VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS 300
           + +E+  L  + YS   + RP   E  A+  +L  A+ T          +HI H+S +  
Sbjct: 199 IAIEEQRLTVKDYS---EARPIVSELEAVERILRFAQLT-------CCPIHICHVS-SRK 247

Query: 301 SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG 360
            L  + +AK  G +++VETCPHYL FS +E  +     KCAPP+R+    E LW+ LM G
Sbjct: 248 VLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAG 307

Query: 361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
            ID++SSDHSP++P++K        + WGGI+  Q
Sbjct: 308 EIDLISSDHSPSLPQMK--TGKTIFEVWGGIAGCQ 340

Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring.

Bacillus halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125) (taxid: 272558)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 5

>sp|B7N966|ALLB_ECOLU Allantoinase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=allB PE=3 SV=1

 Score =  224 bits (572), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 125/322 (38%), Positives = 176/322 (54%), Gaps = 37/322 (11%)

Query: 87  QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIS 146
           +V+D    V+ PG++D H H+ +PGR+ WEG+ +GT+AAA GGITT+I+MPLN  P+T+ 
Sbjct: 42  EVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVD 101

Query: 147 TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG----I 202
             +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G K F+   G     
Sbjct: 102 RASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFKCFVATCGDRGID 158

Query: 203 NDFPMTNASHIKEGLSVLARYKRPLLVHAEM---------EKGSERHVKLEDDTLDTRSY 253
           NDF   N     +G   L    +P+LVH E          E  SE  V   D        
Sbjct: 159 NDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDALGEEAKSEGRVTAHD-------- 210

Query: 254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD 313
             Y+ +RP   E  AIR +L +AK         G  LHI H+S +   ++ +  A+  G 
Sbjct: 211 --YVASRPVFTEVEAIRRVLYLAK-------VAGCRLHICHIS-SPEGVEEVTRARQEGQ 260

Query: 314 SITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTV 373
            +T E+CPHY     E+  +  T  KC+PPIRD  N++ +WE L +G ID L SDHSP  
Sbjct: 261 DVTCESCPHYFVLDTEQFEEIGTLAKCSPPIRDLENQKGMWEKLFNGEIDCLVSDHSPCP 320

Query: 374 PELKLLDEGNFLKAWGGISSLQ 395
           PE+K    GN ++AWGGI+ LQ
Sbjct: 321 PEMK---AGNIMEAWGGIAGLQ 339

Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring.

Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) (taxid: 585056)

EC: 3

EC: .

EC: 5

EC: .

EC: 2

EC: .

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
255556025	500	allantoinase, putative [Ricinus communis	0.974	0.778	0.763	1e-178
224079243	504	predicted protein [Populus trichocarpa]	0.934	0.740	0.787	1e-174
21555036	506	unknown [Arabidopsis thaliana]	0.939	0.741	0.738	1e-163
18412757	506	allantoinase [Arabidopsis thaliana] gi|1	0.939	0.741	0.738	1e-163
449457721	503	PREDICTED: allantoinase-like [Cucumis sa	0.937	0.743	0.732	1e-161
39653353	512	allantoinase [Robinia pseudoacacia]	0.977	0.761	0.681	1e-161
356549345	512	PREDICTED: probable allantoinase 1-like	0.969	0.755	0.669	1e-160
449508894	503	PREDICTED: LOW QUALITY PROTEIN: allantoi	0.937	0.743	0.730	1e-160
356555194	513	PREDICTED: probable allantoinase 1-like	0.979	0.762	0.669	1e-160
297813881	505	hypothetical protein ARALYDRAFT_490140 [	0.927	0.732	0.742	1e-160

>gi|255556025|ref|XP_002519047.1| allantoinase, putative [Ricinus communis] gi|223541710|gb|EEF43258.1| allantoinase, putative [Ricinus communis]

 Score =  631 bits (1627), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 301/394 (76%), Positives = 346/394 (87%), Gaps = 5/394 (1%)

Query: 5   NLQWRLLPTLTLLAASLFLLVFKDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVE 64
           +L WR+LP L LLA+  +   F  S KL++++CSLLPY+ +W+ SK IVTP+GVISGAVE
Sbjct: 3   HLLWRMLPLLALLASFFY---FFQSQKLTYNDCSLLPYSHFWIISKNIVTPRGVISGAVE 59

Query: 65  IKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKA 124
           +KEGNI+S+V EEDW  N K G ++DYGE V+MPG IDVHAHLDDPGRTEWEGFPSGTKA
Sbjct: 60  VKEGNIVSVVKEEDWHVNFKRGHMIDYGEVVVMPGFIDVHAHLDDPGRTEWEGFPSGTKA 119

Query: 125 AAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEA 184
           AAAGGITTLIDMPLNSDPST+S ETL+LK++AAEK IYVDVGFWGGLVPENA+N S+LEA
Sbjct: 120 AAAGGITTLIDMPLNSDPSTVSVETLRLKLEAAEKNIYVDVGFWGGLVPENAFNGSSLEA 179

Query: 185 LLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE 244
           LL+AGVLGLKSFMCPSGINDFPMT+A+HIKEGLSVLA+Y+RPLLVHAE+++ SE ++  E
Sbjct: 180 LLSAGVLGLKSFMCPSGINDFPMTDATHIKEGLSVLAKYRRPLLVHAEIQQDSESYI--E 237

Query: 245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDL 304
           D   D R YSTYLKTRP SWEEAAIRELLTV+KDTR  GPAEG+HLHIVHLSD+ SSL L
Sbjct: 238 DGMDDPRHYSTYLKTRPASWEEAAIRELLTVSKDTRIGGPAEGSHLHIVHLSDSGSSLQL 297

Query: 305 LMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDM 364
           L +AK +GDS+TVETCPHYLAFSAEEI DGDTRFKCAPPIRDA NKE LW+AL+ G IDM
Sbjct: 298 LKQAKRSGDSVTVETCPHYLAFSAEEIQDGDTRFKCAPPIRDATNKEALWKALLKGDIDM 357

Query: 365 LSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY 398
           LSSDHSPTVPELKLL+EGNFL+AWGGISSLQ  +
Sbjct: 358 LSSDHSPTVPELKLLNEGNFLRAWGGISSLQFVF 391

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224079243|ref|XP_002305806.1| predicted protein [Populus trichocarpa] gi|222848770|gb|EEE86317.1| predicted protein [Populus trichocarpa]

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 296/376 (78%), Positives = 333/376 (88%), Gaps = 3/376 (0%)

Query: 21  LFLLVFKDSAKL-SHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDW 79
           ++   F+DS  L   S+CSL PYN YW+ SK IVTP GVISGAVE+KE  I+SI+ EEDW
Sbjct: 19  IYFFYFQDSPTLFERSDCSLFPYNHYWIISKLIVTPHGVISGAVEVKEEKIVSIIKEEDW 78

Query: 80  PRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLN 139
             N K GQ++DYGEAV+MPGLIDVHAHL+DPGRTEWEGFPSGT+AAAAGGITTLIDMPLN
Sbjct: 79  HGNLKKGQIIDYGEAVVMPGLIDVHAHLNDPGRTEWEGFPSGTRAAAAGGITTLIDMPLN 138

Query: 140 SDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP 199
           + P+T+S ETLKLK+DAAEK IYVDVGFWGGLVPENA++A++LEALL+AG LGLKSFMCP
Sbjct: 139 NFPATVSAETLKLKIDAAEKNIYVDVGFWGGLVPENAFDANSLEALLSAGALGLKSFMCP 198

Query: 200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKT 259
           SGINDFPMTN+SHIKEGLS+LA+Y+RPLLVHAE+ + SE H  LED   D RSYSTYLKT
Sbjct: 199 SGINDFPMTNSSHIKEGLSILAKYRRPLLVHAEIPQDSESH--LEDGENDPRSYSTYLKT 256

Query: 260 RPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET 319
           RPPSWEEAAIRELLTV+KDTR  GPAEGAHLH+VHLSDA SSL LL EAK+NGDS+TVET
Sbjct: 257 RPPSWEEAAIRELLTVSKDTRIGGPAEGAHLHVVHLSDAGSSLQLLKEAKSNGDSVTVET 316

Query: 320 CPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLL 379
           CPHYLAFSAEEI DGDT FKCAPPIRDAANKE+LW AL++G IDMLSSDHSP+VP+LKL 
Sbjct: 317 CPHYLAFSAEEIKDGDTCFKCAPPIRDAANKERLWTALLEGDIDMLSSDHSPSVPDLKLF 376

Query: 380 DEGNFLKAWGGISSLQ 395
           DEGNFLKAWGGISSLQ
Sbjct: 377 DEGNFLKAWGGISSLQ 392

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|21555036|gb|AAM63760.1| unknown [Arabidopsis thaliana]

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/382 (73%), Positives = 331/382 (86%), Gaps = 7/382 (1%)

Query: 17  LAASLFLLVFKDSAKLS-HSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVS 75
           L  +LF   F     L  +++CSLLP++ YW++SKRIVTP G+ISG+VE+K G I+S+V 
Sbjct: 16  LIVALFSFFFASPRSLQGNNKCSLLPHDHYWISSKRIVTPNGLISGSVEVKGGIIVSVVK 75

Query: 76  EEDWPRNSKTG-QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLI 134
           E DW ++ ++  +V+DYGEAV+MPGLIDVH HLDDPGR+EWEGFPSGTKAAAAGGITTL+
Sbjct: 76  EVDWHKSQRSRVKVIDYGEAVLMPGLIDVHVHLDDPGRSEWEGFPSGTKAAAAGGITTLV 135

Query: 135 DMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLK 194
           DMPLNS PST+S ETLKLK++AA+ RI+VDVGFWGGLVP+NA N+SALE+LL+AGVLGLK
Sbjct: 136 DMPLNSFPSTVSPETLKLKIEAAKNRIHVDVGFWGGLVPDNALNSSALESLLDAGVLGLK 195

Query: 195 SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL-DTRSY 253
           SFMCPSGINDFPMTN +HIKEGLSVLA+YKRPLLVHAE+    ER +++ED +  D RSY
Sbjct: 196 SFMCPSGINDFPMTNITHIKEGLSVLAKYKRPLLVHAEI----ERDLEIEDGSENDPRSY 251

Query: 254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD 313
            TYLKTRP SWEE AIR LL+V ++TR  G AEGAHLHIVHLSDASSSLDL+ EAK  GD
Sbjct: 252 LTYLKTRPTSWEEGAIRNLLSVTENTRIGGSAEGAHLHIVHLSDASSSLDLIKEAKGKGD 311

Query: 314 SITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTV 373
           S+TVETCPHYLAFSAEEIP+GDTRFKC+PPIRDAAN+EKLWEALM+G IDMLSSDHSPT 
Sbjct: 312 SVTVETCPHYLAFSAEEIPEGDTRFKCSPPIRDAANREKLWEALMEGDIDMLSSDHSPTK 371

Query: 374 PELKLLDEGNFLKAWGGISSLQ 395
           PELKL+ +GNFLKAWGGISSLQ
Sbjct: 372 PELKLMSDGNFLKAWGGISSLQ 393

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|18412757|ref|NP_567276.1| allantoinase [Arabidopsis thaliana] gi|15028089|gb|AAK76575.1| unknown protein [Arabidopsis thaliana] gi|21281139|gb|AAM44996.1| unknown protein [Arabidopsis thaliana] gi|332657048|gb|AEE82448.1| allantoinase [Arabidopsis thaliana]

 Score =  579 bits (1493), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 282/382 (73%), Positives = 331/382 (86%), Gaps = 7/382 (1%)

Query: 17  LAASLFLLVFKDSAKLS-HSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVS 75
           L  +LF   F     L  +++CSLLP++ YW++SKRIVTP G+ISG+VE+K G I+S+V 
Sbjct: 16  LIVALFSFFFASPRSLQGNNKCSLLPHDHYWISSKRIVTPNGLISGSVEVKGGIIVSVVK 75

Query: 76  EEDWPRNSKTG-QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLI 134
           E DW ++ ++  +V+DYGEAV+MPGLIDVH HLDDPGR+EWEGFPSGTKAAAAGGITTL+
Sbjct: 76  EVDWHKSQRSRVKVIDYGEAVLMPGLIDVHVHLDDPGRSEWEGFPSGTKAAAAGGITTLV 135

Query: 135 DMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLK 194
           DMPLNS PST+S ETLKLK++AA+ RI+VDVGFWGGLVP+NA N+SALE+LL+AGVLGLK
Sbjct: 136 DMPLNSFPSTVSPETLKLKIEAAKNRIHVDVGFWGGLVPDNALNSSALESLLDAGVLGLK 195

Query: 195 SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL-DTRSY 253
           SFMCPSGINDFPMTN +HIKEGLSVLA+YKRPLLVHAE+    ER +++ED +  D RSY
Sbjct: 196 SFMCPSGINDFPMTNITHIKEGLSVLAKYKRPLLVHAEI----ERDLEIEDGSENDPRSY 251

Query: 254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD 313
            TYLKTRP SWEE AIR LL+V ++TR  G AEGAHLHIVHLSDASSSLDL+ EAK  GD
Sbjct: 252 LTYLKTRPTSWEEGAIRNLLSVTENTRIGGSAEGAHLHIVHLSDASSSLDLIKEAKGKGD 311

Query: 314 SITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTV 373
           S+TVETCPHYLAFSAEEIP+GDTRFKC+PPIRDAAN+EKLWEALM+G IDMLSSDHSPT 
Sbjct: 312 SVTVETCPHYLAFSAEEIPEGDTRFKCSPPIRDAANREKLWEALMEGDIDMLSSDHSPTK 371

Query: 374 PELKLLDEGNFLKAWGGISSLQ 395
           PELKL+ +GNFLKAWGGISSLQ
Sbjct: 372 PELKLMSDGNFLKAWGGISSLQ 393

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449457721|ref|XP_004146596.1| PREDICTED: allantoinase-like [Cucumis sativus]

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 277/378 (73%), Positives = 318/378 (84%), Gaps = 4/378 (1%)

Query: 19  ASLFLLVF-KDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEE 77
           AS+FL  + KD    S +ECSLLP+  +W+TSKRIVTP+GVISGAVEI  G I+SIV EE
Sbjct: 16  ASIFLFFYLKDP---SDNECSLLPHKHFWITSKRIVTPQGVISGAVEINGGKIVSIVKEE 72

Query: 78  DWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 137
           +         VVDY +AV+MPGL+DVH HLDDPGR+EWEGFPSGTKAAAAGG+TTL+DMP
Sbjct: 73  EKHGKIMGNHVVDYADAVVMPGLVDVHVHLDDPGRSEWEGFPSGTKAAAAGGVTTLVDMP 132

Query: 138 LNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFM 197
           LN+ PST S ETLKLK+ AAE RIYVDVGFWGGLVPENA+NASALE LL AG LGLKSFM
Sbjct: 133 LNNFPSTTSEETLKLKIKAAEGRIYVDVGFWGGLVPENAFNASALENLLKAGALGLKSFM 192

Query: 198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL 257
           CPSGINDFPMTN +HIKEGLSVLA+YKRPLLVH+E+E+ S   V+LE    D R+YSTYL
Sbjct: 193 CPSGINDFPMTNITHIKEGLSVLAKYKRPLLVHSEIEQSSPSPVQLEGSQDDPRTYSTYL 252

Query: 258 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITV 317
            TRPPSWEEAA+RELL V  +TR  GPAEGAH+H+ HLSD+ S+L+L+ EAK +GDS++V
Sbjct: 253 ATRPPSWEEAAVRELLKVTSNTRPGGPAEGAHIHVAHLSDSGSTLELIKEAKRSGDSVSV 312

Query: 318 ETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK 377
           ETC HYLAFS E+I DGDTRFKCAPPIRD ANKEKLW+ALM+GHIDMLSSDHSPTVP LK
Sbjct: 313 ETCTHYLAFSEEDIKDGDTRFKCAPPIRDKANKEKLWDALMEGHIDMLSSDHSPTVPHLK 372

Query: 378 LLDEGNFLKAWGGISSLQ 395
           L D G+FLKAWGG+SSLQ
Sbjct: 373 LPDSGDFLKAWGGVSSLQ 390

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|39653353|gb|AAR29343.1| allantoinase [Robinia pseudoacacia]

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 272/399 (68%), Positives = 332/399 (83%), Gaps = 9/399 (2%)

Query: 5   NLQWRLLPTLTLLAASLFLLVFKDS--------AKLSHSECSLLPYNQYWLTSKRIVTPK 56
            L WR+LP L LL + L     +DS         KL   ECSLLP+  YW++SKRIVTP+
Sbjct: 3   QLVWRVLPMLALLVSFLVFFYLQDSYKAQLSPFIKLPGDECSLLPHRHYWISSKRIVTPQ 62

Query: 57  GVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE 116
           G+ISG+VEI EG I+SI+       NS    V+DYGEAV+MPGLIDVH HLD+PGRTEWE
Sbjct: 63  GIISGSVEINEGEIVSIIEGYGKQGNSMQEAVIDYGEAVVMPGLIDVHVHLDEPGRTEWE 122

Query: 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA 176
           GF +GT+AAAAGG+TT++DMPLN+ P+T+S ETL+LK++AAEK++YVDVGFWGGL+PENA
Sbjct: 123 GFDTGTRAAAAGGVTTVVDMPLNNYPTTVSKETLQLKLEAAEKKLYVDVGFWGGLIPENA 182

Query: 177 YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG 236
            N S LE LL+AGVLG+KSFMCPSGI+DFPMT   HIKEGLSVLA+Y+RPLLVHAE+++ 
Sbjct: 183 LNTSILEGLLSAGVLGVKSFMCPSGIDDFPMTTIDHIKEGLSVLAKYRRPLLVHAEIQQD 242

Query: 237 SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS 296
           S+ H++L+ +  D R+Y TYL TRPPSWE+AAI+EL+ V KDT   GP EGAH+HIVHLS
Sbjct: 243 SKNHLELKGNG-DPRAYLTYLNTRPPSWEQAAIKELVDVTKDTIIGGPLEGAHVHIVHLS 301

Query: 297 DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEA 356
           D+S+SLDL+ EAK+ GDSI+VETCPHYLAFS+EEIPD DTRFKC+PPIRDA NKEKLWEA
Sbjct: 302 DSSASLDLIKEAKSRGDSISVETCPHYLAFSSEEIPDRDTRFKCSPPIRDALNKEKLWEA 361

Query: 357 LMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           +++GHID+LSSDHSPTVPELKLL+EG+FL+AWGGISSLQ
Sbjct: 362 VLEGHIDLLSSDHSPTVPELKLLEEGDFLRAWGGISSLQ 400

Source: Robinia pseudoacacia

Species: Robinia pseudoacacia

Genus: Robinia

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549345|ref|XP_003543054.1| PREDICTED: probable allantoinase 1-like [Glycine max]

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 265/396 (66%), Positives = 332/396 (83%), Gaps = 9/396 (2%)

Query: 8   WRLLPTLTLLAASLFLLVFKDS--------AKLSHSECSLLPYNQYWLTSKRIVTPKGVI 59
           WR+LP LT+L + +     +DS         KL  S+CSLLP+  +W+TSKRIVTP+G+I
Sbjct: 6   WRVLPLLTILMSLVVFFYLQDSYRAHLHPLVKLPRSKCSLLPHRHFWITSKRIVTPQGII 65

Query: 60  SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP 119
           SG+VEI EG IIS++        SK  +++DYG AV+MPGLIDVH HLD+PGRT WEGF 
Sbjct: 66  SGSVEINEGKIISVIKGYSKQGKSKQEKIIDYGGAVVMPGLIDVHVHLDEPGRTAWEGFD 125

Query: 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNA 179
           +GT+AAAAGG+TT++DMPLN+ P+T+S ETLKLK++AAE +IYVDVGFWGGL+PENA+N 
Sbjct: 126 TGTRAAAAGGVTTVVDMPLNNHPTTVSRETLKLKLEAAENKIYVDVGFWGGLIPENAHNT 185

Query: 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER 239
           S LE LL+AGVLGLKSFMCPSGI+DFP+T   HIKEGLSVLA+Y+RPLLVH+E+++ S++
Sbjct: 186 SILEGLLSAGVLGLKSFMCPSGISDFPLTTIHHIKEGLSVLAKYRRPLLVHSEIQQHSKK 245

Query: 240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS 299
           H++L D     R+Y TYL TRPPSWEEAAI+EL+ V KDTR  GP EGAH+H+VHLSD+S
Sbjct: 246 HLELNDKG-GPRAYLTYLHTRPPSWEEAAIKELVGVTKDTRKGGPLEGAHVHVVHLSDSS 304

Query: 300 SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMD 359
           +SLDL+ EAK  GDSI+VETCPHYLAFS+EEIP+GDTRFKC+PPIRDA N+EKLWEA+++
Sbjct: 305 ASLDLIKEAKRRGDSISVETCPHYLAFSSEEIPNGDTRFKCSPPIRDAYNREKLWEAVLE 364

Query: 360 GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           GHID+LSSDHSPTVP+LKLL+EG+FLKAWGG++SLQ
Sbjct: 365 GHIDLLSSDHSPTVPQLKLLEEGDFLKAWGGVTSLQ 400

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449508894|ref|XP_004163437.1| PREDICTED: LOW QUALITY PROTEIN: allantoinase-like [Cucumis sativus]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 276/378 (73%), Positives = 317/378 (83%), Gaps = 4/378 (1%)

Query: 19  ASLFLLVF-KDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEE 77
           AS+FL  + KD    S +ECSLLP+  +W+TSKRIVTP+GVISGAVEI  G I+SIV EE
Sbjct: 16  ASIFLFFYLKDP---SDNECSLLPHKHFWITSKRIVTPQGVISGAVEINGGKIVSIVKEE 72

Query: 78  DWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMP 137
           +         VVDY +AV+MPGL+DVH HLDDPGR+EWEGFPSGTKAAAAGG+TTL+DMP
Sbjct: 73  EKHGKIMGNHVVDYADAVVMPGLVDVHVHLDDPGRSEWEGFPSGTKAAAAGGVTTLVDMP 132

Query: 138 LNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFM 197
           LN+ PST S ETLKLK+ AAE RIYVDVGFWGGLVPENA+NASALE LL AG LGLKSFM
Sbjct: 133 LNNFPSTTSEETLKLKIKAAEGRIYVDVGFWGGLVPENAFNASALENLLKAGALGLKSFM 192

Query: 198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL 257
           CPSGINDFPMTN +HIKEGLSVLA+YKRPLLVH+E+E+ S   V+LE    D R+YSTYL
Sbjct: 193 CPSGINDFPMTNITHIKEGLSVLAKYKRPLLVHSEIEQSSPSPVQLEGSQDDPRTYSTYL 252

Query: 258 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITV 317
            TRPPSWEEAA+RELL V  +TR  GPAEGAH+H+ HLSD+ S+L+L+ EAK +GDS++V
Sbjct: 253 ATRPPSWEEAAVRELLKVTSNTRPGGPAEGAHIHVAHLSDSGSTLELIKEAKRSGDSVSV 312

Query: 318 ETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK 377
           ETC HYLAFS E+I DGDTRFKCAPPIRD ANKE LW+ALM+GHIDMLSSDHSPTVP LK
Sbjct: 313 ETCTHYLAFSEEDIKDGDTRFKCAPPIRDKANKEXLWDALMEGHIDMLSSDHSPTVPHLK 372

Query: 378 LLDEGNFLKAWGGISSLQ 395
           L D G+FLKAWGG+SSLQ
Sbjct: 373 LPDSGDFLKAWGGVSSLQ 390

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356555194|ref|XP_003545920.1| PREDICTED: probable allantoinase 1-like [Glycine max]

 Score =  571 bits (1472), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 267/399 (66%), Positives = 328/399 (82%), Gaps = 8/399 (2%)

Query: 5   NLQWRLLPTLTLLAASLFLLVFKDS--------AKLSHSECSLLPYNQYWLTSKRIVTPK 56
            L WR+LP LT+L +       +DS         KL   +CSLLP+  +W++SKRIVTP+
Sbjct: 3   QLLWRVLPLLTILVSFGVFFYLQDSYTAQFYALIKLPRDKCSLLPHRHFWISSKRIVTPQ 62

Query: 57  GVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE 116
           G+ISG+VEI +G IIS+V         K  +V+DYG+AVIMPGLIDVH HLD+PGRTEWE
Sbjct: 63  GIISGSVEINDGKIISVVEGHANQGKPKQEEVIDYGDAVIMPGLIDVHVHLDEPGRTEWE 122

Query: 117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA 176
           GF +GT+AAAAGG+TT++DMPLN+ P+T+S E LKLK+DAAE +IYVDVGFWGGL+PENA
Sbjct: 123 GFDTGTRAAAAGGVTTVVDMPLNNYPTTVSKEKLKLKLDAAEDKIYVDVGFWGGLIPENA 182

Query: 177 YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG 236
            N S LE LL+AGVLG+KSFMCPSGINDFPMT   HIK GL VLA+YKRP++VHAE+++ 
Sbjct: 183 LNTSILEGLLSAGVLGMKSFMCPSGINDFPMTTIDHIKAGLPVLAKYKRPIVVHAEVQQD 242

Query: 237 SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS 296
            E H++L +D LD R+Y TYL  RPPSWEEAAI++L+ V KDTR  GP EGAH+HIVHLS
Sbjct: 243 FENHLELNEDNLDPRAYLTYLNARPPSWEEAAIKQLVGVTKDTRKGGPLEGAHVHIVHLS 302

Query: 297 DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEA 356
           D+S+SLDL+ EAK+ GDSI+VETCPHYLAFS+EEIP+GDTRFKC+PPIRDA N+EKLW A
Sbjct: 303 DSSASLDLIKEAKSRGDSISVETCPHYLAFSSEEIPNGDTRFKCSPPIRDAYNREKLWGA 362

Query: 357 LMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           +++GHID+LSSDHSPTVPELKL++EG+FLKAWGGISSLQ
Sbjct: 363 VLEGHIDLLSSDHSPTVPELKLMEEGDFLKAWGGISSLQ 401

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297813881|ref|XP_002874824.1| hypothetical protein ARALYDRAFT_490140 [Arabidopsis lyrata subsp. lyrata] gi|297320661|gb|EFH51083.1| hypothetical protein ARALYDRAFT_490140 [Arabidopsis lyrata subsp. lyrata]

 Score =  571 bits (1471), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 280/377 (74%), Positives = 324/377 (85%), Gaps = 7/377 (1%)

Query: 22  FLLVFKDSAKLS-HSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP 80
           F + F     L  ++ CSLLP++ YW++SKRIVTP G+ISG+VE+K G I+S+V E DW 
Sbjct: 21  FSIFFASPRSLQGNNRCSLLPHDHYWISSKRIVTPDGLISGSVEVKGGIIVSVVKEVDWH 80

Query: 81  RNSKTG-QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLN 139
           ++ ++  +V+DYGEAVIMPGLIDVH HLDDPGR+EWEGF SGTKAAAAGGITTL+DMPLN
Sbjct: 81  KSQRSRVKVIDYGEAVIMPGLIDVHVHLDDPGRSEWEGFSSGTKAAAAGGITTLVDMPLN 140

Query: 140 SDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP 199
           S PST+S ETLKLK++AAE RI+VDVGFWGGLVP+NA NASALE+LL+AGVLGLKSFMCP
Sbjct: 141 SYPSTVSPETLKLKIEAAENRIHVDVGFWGGLVPDNALNASALESLLDAGVLGLKSFMCP 200

Query: 200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED-DTLDTRSYSTYLK 258
           SGINDFPMTN +HIKEGLSVLA+Y+RPLLVHAE+EK  E    +ED +  D RSY TYLK
Sbjct: 201 SGINDFPMTNITHIKEGLSVLAKYRRPLLVHAEVEKDLE----IEDGNDNDPRSYLTYLK 256

Query: 259 TRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVE 318
           TRP SWEE AIR LL+V ++TR  G AEGAH+HIVHLSDASSSLDL+ EAK  GDS+TVE
Sbjct: 257 TRPTSWEEGAIRNLLSVTENTRIGGSAEGAHVHIVHLSDASSSLDLIKEAKGKGDSVTVE 316

Query: 319 TCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKL 378
           TCPHYLAFSAEEIP GDTRFKC+PPIRDA N+EKLWEA+M+G IDMLSSDHSPT PELKL
Sbjct: 317 TCPHYLAFSAEEIPKGDTRFKCSPPIRDATNREKLWEAMMEGDIDMLSSDHSPTKPELKL 376

Query: 379 LDEGNFLKAWGGISSLQ 395
           L +GNFLKAWGGISSLQ
Sbjct: 377 LSDGNFLKAWGGISSLQ 393

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
TAIR|locus:505006432	506	ALN "allantoinase" [Arabidopsi	0.897	0.707	0.700	4.4e-139
TIGR_CMR|CPS_4867	473	CPS_4867 "putative allantoinas	0.849	0.716	0.403	1.4e-71
ASPGD|ASPL0000076835	506	AN4603 [Emericella nidulans (t	0.734	0.579	0.396	1.8e-62
SGD|S000001466	460	DAL1 "Allantoinase" [Saccharom	0.812	0.704	0.398	3e-62
DICTYBASE|DDB_G0282199	649	allB1 "allantoinase" [Dictyost	0.849	0.522	0.365	1.9e-60
CGD|CAL0005274	586	DAL1 [Candida albicans (taxid:	0.498	0.339	0.360	1.3e-59
UNIPROTKB|Q5A7L5	586	DAL1 "Putative uncharacterized	0.498	0.339	0.360	1.3e-59
FB|FBgn0030914	492	CG6106 [Drosophila melanogaste	0.754	0.611	0.415	1.1e-57
ZFIN|ZDB-GENE-041212-22	459	zgc:103559 "zgc:103559" [Danio	0.741	0.644	0.407	5.9e-57
UNIPROTKB|G4NGA5	550	MGG_10412 "Allantoinase" [Magn	0.754	0.547	0.385	6.1e-56

TAIR|locus:505006432 ALN "allantoinase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1361 (484.2 bits), Expect = 4.4e-139, P = 4.4e-139
 Identities = 255/364 (70%), Positives = 302/364 (82%)

Query:    34 HSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTG-QVVDYG 92
             +++CSLLP++ YW++SKRIVTP G+ISG+VE+K G I+S+V E DW ++ ++  +V+DYG
Sbjct:    34 NNKCSLLPHDHYWISSKRIVTPNGLISGSVEVKGGIIVSVVKEVDWHKSQRSRVKVIDYG 93

Query:    93 EAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKL 152
             EAV+MPGLIDVH HLDDPGR+EWEGFPS            L+DMPLNS PST+S ETLKL
Sbjct:    94 EAVLMPGLIDVHVHLDDPGRSEWEGFPSGTKAAAAGGITTLVDMPLNSFPSTVSPETLKL 153

Query:   153 KVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASH 212
             K++AA+ RI+VDVGFWGGLVP+NA N+SALE+LL+AGVLGLKSFMCPSGINDFPMTN +H
Sbjct:   154 KIEAAKNRIHVDVGFWGGLVPDNALNSSALESLLDAGVLGLKSFMCPSGINDFPMTNITH 213

Query:   213 IKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL-DTRSYSTYLKTRPPSWEEAAIRE 271
             IKEGLSVLA+YKRPLLVHAE+E    R +++ED +  D RSY TYLKTRP SWEE AIR 
Sbjct:   214 IKEGLSVLAKYKRPLLVHAEIE----RDLEIEDGSENDPRSYLTYLKTRPTSWEEGAIRN 269

Query:   272 LLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEI 331
             LL+V ++TR  G AEGAHLHIVH            EAK  GDS+TVETCPHYLAFSAEEI
Sbjct:   270 LLSVTENTRIGGSAEGAHLHIVHLSDASSSLDLIKEAKGKGDSVTVETCPHYLAFSAEEI 329

Query:   332 PDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGI 391
             P+GDTRFKC+PPIRDAAN+EKLWEALM+G IDMLSSDHSPT PELKL+ +GNFLKAWGGI
Sbjct:   330 PEGDTRFKCSPPIRDAANREKLWEALMEGDIDMLSSDHSPTKPELKLMSDGNFLKAWGGI 389

Query:   392 SSLQ 395
             SSLQ
Sbjct:   390 SSLQ 393

GO:0000256 "allantoin catabolic process" evidence=IEA

GO:0004038 "allantoinase activity" evidence=IEA;IGI;IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA;ISS

GO:0016810 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds" evidence=IEA

GO:0050897 "cobalt ion binding" evidence=IEA

GO:0010136 "ureide catabolic process" evidence=IMP

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0006995 "cellular response to nitrogen starvation" evidence=IEP

TIGR_CMR|CPS_4867 CPS_4867 "putative allantoinase" [Colwellia psychrerythraea 34H (taxid:167879)]

 Score = 724 (259.9 bits), Expect = 1.4e-71, P = 1.4e-71
 Identities = 145/359 (40%), Positives = 214/359 (59%)

Query:    43 NQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMP 98
             + + L SK+++   G    +I+  +EIK G +I  +       +     + D GE V+MP
Sbjct:    20 SHFALQSKKVIVHAGDQSEMIAACIEIK-GQLIHNIHPYGQALDCP---ITDLGEQVLMP 75

Query:    99 GLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAE 158
             GL+D H H+++PGRTEWEGF +            L+DMPLN  P T +    + K+ +  
Sbjct:    76 GLVDSHVHINEPGRTEWEGFNTATQAAAAGGITTLVDMPLNCIPVTTTKAAFEEKLASVH 135

Query:   159 KRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLS 218
              +++VD GFWGG++P+N      L+ LL AGVLG+KSF+  SGI +FP   A  I+  + 
Sbjct:   136 DKLWVDCGFWGGVIPDNI---DELDDLLTAGVLGVKSFLIDSGIEEFPNVAAKDIRAAMP 192

Query:   219 VLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD 278
             +LA++  P L+HAE++ GS   VK+ D       Y+++L++RP SWE  AI  ++ +A++
Sbjct:   193 ILAKHDVPYLIHAELDCGSFDDVKITD------KYNSFLESRPKSWENNAISLMVDMARE 246

Query:   279 TRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRF 338
             ++  G  +   +HIVH            +AK  G   T ETCPHYL  ++E IPDG T F
Sbjct:   247 SKAAG--DNCKIHIVHLSSDEALDTIA-KAKAEGLRFTAETCPHYLTIASENIPDGKTLF 303

Query:   339 KCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG 397
             KC PPIR+  N+E+LW+A+ DG I  + SDHSP  P+LK +D G+  KAWGGIS+LQ G
Sbjct:   304 KCCPPIRENKNREQLWQAVTDGRISFIVSDHSPCTPQLKHIDTGDIEKAWGGISALQFG 362

GO:0000256 "allantoin catabolic process" evidence=ISS

GO:0004038 "allantoinase activity" evidence=ISS

ASPGD|ASPL0000076835 AN4603 [Emericella nidulans (taxid:162425)]

 Score = 569 (205.4 bits), Expect = 1.8e-62, Sum P(2) = 1.8e-62
 Identities = 125/315 (39%), Positives = 181/315 (57%)

Query:    72 SIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXX 131
             S++   D+P  +      D+   V++PGL+D H HL++PGRTEWEGF +           
Sbjct:    42 SVIPASDFPDGTP---YTDFSPYVLLPGLVDAHVHLNEPGRTEWEGFYTGTQAAAFGGVT 98

Query:   132 XLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVL 191
              +IDMPLN+ P T + E  KLK+ AAE + +VDVGF+GG++P NA     L+AL+  GV 
Sbjct:    99 TVIDMPLNAIPPTTTVENFKLKLKAAEGKCWVDVGFYGGIIPGNA---GELKALVREGVR 155

Query:   192 GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM---EKGSERHVKLEDDTL 248
             G K F+  SG+++FP  ++  +++ ++ LA     L+ HAEM   +  SE    + +   
Sbjct:   156 GFKGFLIDSGVDEFPAVSSEDVRKAMAELADEPTTLMFHAEMVPPKTPSELPEVMPEGAP 215

Query:   249 DTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEA 308
             +  +YST+L +RP  +E  A+ E+L+++        A    LHIVH            +A
Sbjct:   216 E--AYSTFLASRPSEYELCAVEEILSLSH------LAPKLPLHIVHLSAMEAIPLLR-KA 266

Query:   309 KTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEAL----MDGHIDM 364
             +  G  IT ETC HYL+ +AEEI DGDTR KC PPIR  +N++ LW  L     DG I  
Sbjct:   267 RAEGVPITAETCYHYLSLAAEEIRDGDTRHKCCPPIRSKSNQDALWAELDRHAEDGVIKT 326

Query:   365 LSSDHSPTVPELKLL 379
             + SDHSP  P+LKLL
Sbjct:   327 IVSDHSPCTPDLKLL 341

GO:0004038 "allantoinase activity" evidence=RCA;IMP

GO:0006139 "nucleobase-containing compound metabolic process" evidence=RCA

GO:0006145 "purine nucleobase catabolic process" evidence=IMP

GO:0005575 "cellular_component" evidence=ND

GO:0009442 "allantoin assimilation pathway" evidence=IEA

SGD|S000001466 DAL1 "Allantoinase" [Saccharomyces cerevisiae (taxid:4932)]

 Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
 Identities = 135/339 (39%), Positives = 196/339 (57%)

Query:    60 SGAV-EIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF 118
             SG + ++ EG   S+V E+      +   + +     I+PGL+D H HL++PGRT WEGF
Sbjct:    28 SGTILDVLEG---SVVMEKTEITKYEIHTLENVSPCTILPGLVDSHVHLNEPGRTSWEGF 84

Query:   119 PSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYN 178
              +            ++DMPLN+ P T + E  ++K++AAE +++ DVGFWGGLVP   +N
Sbjct:    85 ETGTQAAISGGVTTVVDMPLNAIPPTTNVENFRIKLEAAEGQMWCDVGFWGGLVP---HN 141

Query:   179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE 238
                L  L+ AGV G K F+  SG+ +FP     +I+E L VLA     ++ HAE+ K  E
Sbjct:   142 LPDLIPLVKAGVRGFKGFLLDSGVEEFPPIGKEYIEEALKVLAEEDTMMMFHAELPKAHE 201

Query:   239 RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXX 298
                + E      R YS++L +RP S+E  AI  +L   +    +GP     +HIVH    
Sbjct:   202 DQQQPEQSH---REYSSFLSSRPDSFEIDAINLILECLR--ARNGPVPP--VHIVHLASM 254

Query:   299 XXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM 358
                     +A+ +G  +T ETC HYL  +AE+IPDG T FKC PPIR  +N++ LW+AL 
Sbjct:   255 KAIPLIR-KARASGLPVTTETCFHYLCIAAEQIPDGATYFKCCPPIRSESNRQGLWDALR 313

Query:   359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG 397
             +G I  + SDHSP  PELK L +G+F  +WGGI+S+ +G
Sbjct:   314 EGVIGSVVSDHSPCTPELKNLQKGDFFDSWGGIASVGLG 352

GO:0000256 "allantoin catabolic process" evidence=IEA

GO:0004038 "allantoinase activity" evidence=IEA;IMP

GO:0016787 "hydrolase activity" evidence=IEA

GO:0016810 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds" evidence=IEA

GO:0016812 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides" evidence=IEA

GO:0016888 "endodeoxyribonuclease activity, producing 5'-phosphomonoesters" evidence=IEA

GO:0050897 "cobalt ion binding" evidence=IEA

GO:0006144 "purine nucleobase metabolic process" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0009442 "allantoin assimilation pathway" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

DICTYBASE|DDB_G0282199 allB1 "allantoinase" [Dictyostelium discoideum (taxid:44689)]

 Score = 619 (223.0 bits), Expect = 1.9e-60, P = 1.9e-60
 Identities = 132/361 (36%), Positives = 207/361 (57%)

Query:    47 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQ--VVDYGEAVIMPGLIDVH 104
             +  K++V    +   ++ IK G II I   +D+    K     +++  + VIM GL+D H
Sbjct:    10 IKGKKVVINGEIKPASILIKNGIIIDI---KDYSSEIKEEHEVLIEEEKLVIMGGLVDSH 66

Query:   105 AHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164
              H+++PGRTEWEGF S            +IDMPLNS P T + E L+ K+++   ++ VD
Sbjct:    67 VHINEPGRTEWEGFLSATSAAASGGVTTIIDMPLNSSPVTTTFENLQTKIESMPGKLRVD 126

Query:   165 VGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK 224
             VG  GG++P N+   S +  +L  GV+G KSF+  SGI++FP      I+E ++V+ + K
Sbjct:   127 VGLLGGIIPGNSSEISRM--VLEGGVVGFKSFLVHSGIDEFPHVKEDDIQEAMNVMKKLK 184

Query:   225 RP-------LLVHAEMEKG-SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA 276
                      ++ HAE+E+   E   +L+ +  D + Y T+LK+RP   E  AI +++ + 
Sbjct:   185 DEQGGRDVVMMFHAEIEEPIKEATERLQRENADPKLYDTFLKSRPRVSENIAIDKVIELT 244

Query:   277 KDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDT 336
             K             HIVH                +G  IT ET  HYL F +E++P G+T
Sbjct:   245 KKNMIK-------THIVHLSSSDAIEAIHEAVHNDGVPITAETTYHYLYFESEQVPYGNT 297

Query:   337 RFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQV 396
              +KC PP+R++ NK+ LW+A+ +G I+++ SDHSP   +LKL+++G+F+KAWGGISSLQ+
Sbjct:   298 LYKCCPPVRESENKDLLWKAVTNGTINIIVSDHSPCTLDLKLIEQGDFMKAWGGISSLQL 357

Query:   397 G 397
             G
Sbjct:   358 G 358

GO:0050897 "cobalt ion binding" evidence=IEA

GO:0016888 "endodeoxyribonuclease activity, producing 5'-phosphomonoesters" evidence=IEA

GO:0016812 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides" evidence=IEA

GO:0016810 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004038 "allantoinase activity" evidence=IEA;ISS

GO:0000256 "allantoin catabolic process" evidence=IEA;ISS

GO:0005622 "intracellular" evidence=ISS

GO:0046872 "metal ion binding" evidence=IEA

GO:0006144 "purine nucleobase metabolic process" evidence=IEA

CGD|CAL0005274 DAL1 [Candida albicans (taxid:5476)]

 Score = 358 (131.1 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
 Identities = 76/211 (36%), Positives = 116/211 (54%)

Query:    47 LTSKRIVTPKGVISGAV--EIKEGNIISIVSEEDWPRNSKTGQV----VDYGE---AVIM 97
             L+S R++    ++   +   ++ G I+ IV     P +    +     +DY     AVIM
Sbjct:     5 LSSTRVLVNDTLLPATIIFSVESGTILEIVDRVLPPNDPILARYNVFPIDYRNVTPAVIM 64

Query:    98 PGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAA 157
             PGL+D H HL++PGRTEWEGF +            +IDMPLN+ P T +     LK++AA
Sbjct:    65 PGLVDAHVHLNEPGRTEWEGFETGTKAAASGGVTTVIDMPLNAIPPTTTVANFNLKINAA 124

Query:   158 EKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 217
             + + +VDVGFWGGL+P+N Y+   L+ L+  GV G K+F+  SG+++FP    +HI   +
Sbjct:   125 KGQTWVDVGFWGGLIPDNLYD---LKPLIRMGVRGFKAFLIESGVDEFPAITPAHILAAM 181

Query:   218 SVLARYKRPLLVHAEMEKGSERHVKLEDDTL 248
               +   K  L+ HAEM+   +       DTL
Sbjct:   182 KEVKDEKTMLMFHAEMQPREKEEFSDSADTL 212

GO:0005575 "cellular_component" evidence=ND

GO:0004038 "allantoinase activity" evidence=IEA

GO:0009442 "allantoin assimilation pathway" evidence=IEA

UNIPROTKB|Q5A7L5 DAL1 "Putative uncharacterized protein DAL1" [Candida albicans SC5314 (taxid:237561)]

 Score = 358 (131.1 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
 Identities = 76/211 (36%), Positives = 116/211 (54%)

Query:    47 LTSKRIVTPKGVISGAV--EIKEGNIISIVSEEDWPRNSKTGQV----VDYGE---AVIM 97
             L+S R++    ++   +   ++ G I+ IV     P +    +     +DY     AVIM
Sbjct:     5 LSSTRVLVNDTLLPATIIFSVESGTILEIVDRVLPPNDPILARYNVFPIDYRNVTPAVIM 64

Query:    98 PGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAA 157
             PGL+D H HL++PGRTEWEGF +            +IDMPLN+ P T +     LK++AA
Sbjct:    65 PGLVDAHVHLNEPGRTEWEGFETGTKAAASGGVTTVIDMPLNAIPPTTTVANFNLKINAA 124

Query:   158 EKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 217
             + + +VDVGFWGGL+P+N Y+   L+ L+  GV G K+F+  SG+++FP    +HI   +
Sbjct:   125 KGQTWVDVGFWGGLIPDNLYD---LKPLIRMGVRGFKAFLIESGVDEFPAITPAHILAAM 181

Query:   218 SVLARYKRPLLVHAEMEKGSERHVKLEDDTL 248
               +   K  L+ HAEM+   +       DTL
Sbjct:   182 KEVKDEKTMLMFHAEMQPREKEEFSDSADTL 212

GO:0005575 "cellular_component" evidence=ND

FB|FBgn0030914 CG6106 [Drosophila melanogaster (taxid:7227)]

 Score = 593 (213.8 bits), Expect = 1.1e-57, P = 1.1e-57
 Identities = 136/327 (41%), Positives = 185/327 (56%)

Query:    82 NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSD 141
             N+++  V D+G+ V+MPGLID + H+++PGR +WEGF +            +ID P N+ 
Sbjct:    55 NTESESVYDFGDLVLMPGLIDPNVHINEPGRKDWEGFATATKAAAAGGFTTIIDRPTNAQ 114

Query:   142 PSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMC-PS 200
             P T+S   LK K   A  +IYVDVGFWGGLVP N      L ALL AGV+GL+  +C P+
Sbjct:   115 PPTVSVAHLKAKTSTARGKIYVDVGFWGGLVPGNG---DQLAALLGAGVMGLQCTLCDPA 171

Query:   201 G--INDFPMTNASHIKEGLSVL----ARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYS 254
                  +FP  N S ++E LS L    A  +  + VHAE+   +E H     D    R Y 
Sbjct:   172 APVSQEFPAVNESQLEEALSQLDKDQAEGEAIVAVHAELPLTTEIH----PDEEAPREYG 227

Query:   255 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDS 314
             T+L TRPP  E +A + L  +A       P     +HI++            E +  G +
Sbjct:   228 TFLVTRPPQMEISATQLLCRLANRH----PRRC--IHILNCSSGESLPLVE-ECRRQGGN 280

Query:   315 ITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH-IDMLSSDHSPTV 373
             +TV+TCPHYLA +AE++PD  T FK  PPIR+  N+E+LW+AL  G  I M+ SDHSP  
Sbjct:   281 LTVDTCPHYLALAAEDVPDCGTEFKTWPPIRERRNQEQLWQALRPGGAIRMIGSDHSPAT 340

Query:   374 PELKLLD----EGNFLKAWGGISSLQV 396
             P  + L      GNFLKAW GI+SLQ+
Sbjct:   341 PGARALTCGRGRGNFLKAWPGINSLQL 367

GO:0004038 "allantoinase activity" evidence=ISS

GO:0000256 "allantoin catabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0050897 "cobalt ion binding" evidence=IEA

ZFIN|ZDB-GENE-041212-22 zgc:103559 "zgc:103559" [Danio rerio (taxid:7955)]

 Score = 586 (211.3 bits), Expect = 5.9e-57, P = 5.9e-57
 Identities = 127/312 (40%), Positives = 170/312 (54%)

Query:    86 GQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTI 145
             G+V+D G+++IMPG++D H H+++PGRT+WEG+ +            + DMPLN+ P T 
Sbjct:    48 GKVLDVGDSLIMPGIVDSHVHVNEPGRTDWEGYWTATRAAAAGGITTIADMPLNTIPPTT 107

Query:   146 STETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDF 205
             +      K+ AA  + +VD  FWGG++P N      L+ +  AGV G K F+  SG+ +F
Sbjct:   108 TLRNFNEKLCAATGQCFVDTAFWGGVIPGNQME---LKPMCQAGVAGFKCFLIHSGVEEF 164

Query:   206 PMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWE 265
             P    + +   +  L      LL HAE E     H   E    D + YST+LK+RP   E
Sbjct:   165 PHVTDADLHAAMKQLQGTNSVLLFHAEQELS---HPVAEKG--DPQEYSTFLKSRPDIME 219

Query:   266 EAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLA 325
               AI  ++      +          HIVH             AK  G  +TVET  HYL 
Sbjct:   220 LEAIHTVIEFCLQYQV-------RCHIVHLSSAEPLELIRA-AKQAGAPLTVETTHHYLN 271

Query:   326 FSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFL 385
              SAE+IP   T+FKC PPIR  AN+E LW AL  G IDM+ SDHSP  P+LK LD G+F 
Sbjct:   272 LSAEDIPGRATQFKCCPPIRGTANQELLWSALKAGDIDMVVSDHSPCTPDLKCLDSGDFT 331

Query:   386 KAWGGISSLQVG 397
             +AWGGISSLQ G
Sbjct:   332 QAWGGISSLQFG 343

GO:0016787 "hydrolase activity" evidence=IEA

GO:0000256 "allantoin catabolic process" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016810 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds" evidence=IEA

GO:0050897 "cobalt ion binding" evidence=IEA

GO:0016812 "hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides" evidence=IEA

GO:0004038 "allantoinase activity" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|G4NGA5 MGG_10412 "Allantoinase" [Magnaporthe oryzae 70-15 (taxid:242507)]

 Score = 535 (193.4 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
 Identities = 126/327 (38%), Positives = 180/327 (55%)

Query:    68 GNIISIVSEEDWPRNSKTGQV--VDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXX 125
             G II+IV     P +S    V  +D    +++PGL+D H HL++PGRTEWEGF +     
Sbjct:    39 GKIIAIVPTI-LPASSFPSSVAYIDQSPKLLLPGLVDAHVHLNEPGRTEWEGFNTGTRAA 97

Query:   126 XXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL 185
                    +IDMPLN+ P T +    + K+ A+  + +VDVGF+GG++P N+ +   L  L
Sbjct:    98 ASGGVTTVIDMPLNAIPPTTTVANFQEKLKASVGQCWVDVGFYGGVIPGNSQD---LLPL 154

Query:   186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM----EKGSERHV 241
             ++AGV G K F+  SG+++FP  +A  I   +  L      L+ HAEM           V
Sbjct:   155 VDAGVRGFKGFLIDSGVDEFPAVSAKDIALAMKALKDAPTTLMFHAEMIPPIADSVGDSV 214

Query:   242 KLEDDTLDTR----SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXX 297
             +     L  +    +YST+L++RPP +E  A+ E+L++     TD  A   HLHIVH   
Sbjct:   215 QSSAPPLAPKGALTAYSTFLESRPPEFETCAVSEILSM-----TD-LAPDLHLHIVHLSA 268

Query:   298 XXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEAL 357
                      EA+  G ++T ETC HYL  ++++I DGDTR KC PPIR   N++ LW  L
Sbjct:   269 TECIPLLR-EARRRGVNVTAETCFHYLGLASDDIEDGDTRHKCCPPIRSKTNQDGLWSEL 327

Query:   358 M-----DGHIDMLSSDHSPTVPELKLL 379
             +     DG I  + SDHSP  PELKLL
Sbjct:   328 VRADQHDGVIKTVVSDHSPCTPELKLL 354

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0044271 "cellular nitrogen compound biosynthetic process" evidence=IEP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.5.2	0.766

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input:
	estExt_fgenesh4_pm.C_LG_IV0194	allantoinase (EC-3.5.2.5) (504 aa)
		(Populus trichocarpa)
Predicted Functional Partners:
	estExt_fgenesh4_pg.C_290028	hypothetical protein (442 aa)	•					•	•		0.986
	fgenesh4_pg.C_LG_II002390	hypothetical protein (289 aa)	•					•			0.940
	fgenesh4_pg.C_scaffold_13902000001	Predicted protein (319 aa)	•		•		•	•	•		0.894
	fgenesh4_pg.C_LG_X000698	hypothetical protein (442 aa)	•					•	•		0.866
	estExt_fgenesh4_pg.C_LG_X2235	RecName- Full=Uricase; EC=1.7.3.3;; Catalyzes the oxidation of uric acid to 5- hydroxyisourate, [...] (308 aa)	•		•				•		0.822
	eugene3.00012554	aspartate carbamoyltransferase (EC-2.1.3.2) (332 aa)	•					•	•		0.713
	eugene3.00290107	hypothetical protein (253 aa)	•								0.608
	grail3.3134000101	Predicted protein (100 aa)							•		0.596
	fgenesh4_pg.C_scaffold_2544000001	Predicted protein (312 aa)							•		0.523
	eugene3.19380001	Predicted protein (500 aa)	•								0.505

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	399
PLN02795	505	PLN02795, PLN02795, allantoinase	0.0
cd01315	447	cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and A	1e-171
TIGR03178	443	TIGR03178, allantoinase, allantoinase	1e-128
PRK06189	451	PRK06189, PRK06189, allantoinase; Provisional	2e-96
COG0044	430	COG0044, PyrC, Dihydroorotase and related cyclic a	7e-83
PRK08044	449	PRK08044, PRK08044, allantoinase; Provisional	4e-80
cd01318	361	cd01318, DHOase_IIb, Dihydroorotase (DHOase), subg	7e-54
TIGR00857	411	TIGR00857, pyrC_multi, dihydroorotase, multifuncti	1e-49
cd01302	337	cd01302, Cyclic_amidohydrolases, Cyclic amidohydro	8e-49
PRK09060	444	PRK09060, PRK09060, dihydroorotase; Validated	3e-48
PRK02382	443	PRK02382, PRK02382, dihydroorotase; Provisional	6e-47
PRK09357	423	PRK09357, pyrC, dihydroorotase; Validated	2e-46
cd01317	374	cd01317, DHOase_IIa, Dihydroorotase (DHOase), subg	5e-45
cd01314	447	cd01314, D-HYD, D-hydantoinases (D-HYD) also calle	7e-43
PRK07575	438	PRK07575, PRK07575, dihydroorotase; Provisional	1e-36
PRK08323	459	PRK08323, PRK08323, phenylhydantoinase; Validated	2e-36
TIGR02033	454	TIGR02033, D-hydantoinase, D-hydantoinase	5e-36
PRK09236	444	PRK09236, PRK09236, dihydroorotase; Reviewed	5e-34
PRK04250	398	PRK04250, PRK04250, dihydroorotase; Provisional	2e-33
PRK01211	409	PRK01211, PRK01211, dihydroorotase; Provisional	3e-29
PRK13404	477	PRK13404, PRK13404, dihydropyrimidinase; Provision	2e-28
PRK00369	392	PRK00369, pyrC, dihydroorotase; Provisional	7e-23
cd01316	344	cd01316, CAD_DHOase, The eukaryotic CAD protein is	1e-22
PRK07369	418	PRK07369, PRK07369, dihydroorotase; Provisional	7e-17
PRK07627	425	PRK07627, PRK07627, dihydroorotase; Provisional	3e-15
PLN02942	486	PLN02942, PLN02942, dihydropyrimidinase	7e-15
pfam13594	66	pfam13594, Amidohydro_5, Amidohydrolase	3e-12
cd01292	275	cd01292, metallo-dependent_hydrolases, Superfamily	1e-10
PRK09059	429	PRK09059, PRK09059, dihydroorotase; Validated	1e-09
cd00854	374	cd00854, NagA, N-acetylglucosamine-6-phosphate dea	2e-09
PRK08417	386	PRK08417, PRK08417, dihydroorotase; Provisional	3e-09
pfam01979	307	pfam01979, Amidohydro_1, Amidohydrolase family	1e-07
COG1820	380	COG1820, NagA, N-acetylglucosamine-6-phosphate dea	1e-07
PRK15446	383	PRK15446, PRK15446, phosphonate metabolism protein	4e-07
PRK09059	429	PRK09059, PRK09059, dihydroorotase; Validated	1e-06
pfam13147	304	pfam13147, Amidohydro_4, Amidohydrolase	1e-06
COG1228	406	COG1228, HutI, Imidazolonepropionase and related a	2e-06
COG0402	421	COG0402, SsnA, Cytosine deaminase and related meta	4e-06
PRK09356	406	PRK09356, PRK09356, imidazolonepropionase; Validat	5e-06
PRK13308	569	PRK13308, ureC, urease subunit alpha; Reviewed	1e-05
cd01303	429	cd01303, GDEase, Guanine deaminase (GDEase)	1e-04
COG3454	377	COG3454, COG3454, Metal-dependent hydrolase involv	1e-04
TIGR00221	380	TIGR00221, nagA, N-acetylglucosamine-6-phosphate d	1e-04
PRK09045	443	PRK09045, PRK09045, N-ethylammeline chlorohydrolas	1e-04
cd01296	371	cd01296, Imidazolone-5PH, Imidazolonepropionase/im	2e-04
COG1574	535	COG1574, COG1574, Predicted metal-dependent hydrol	3e-04
COG1001	584	COG1001, AdeC, Adenine deaminase [Nucleotide trans	6e-04
cd01299	342	cd01299, Met_dep_hydrolase_A, Metallo-dependent hy	6e-04
cd01298	411	cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enz	6e-04
COG3964	386	COG3964, COG3964, Predicted amidohydrolase [Genera	8e-04
PRK09237	380	PRK09237, PRK09237, dihydroorotase; Provisional	0.001
cd01307	338	cd01307, Met_dep_hydrolase_B, Metallo-dependent hy	0.001
cd01300	479	cd01300, YtcJ_like, YtcJ_like metal dependent amid	0.001
PRK09061	509	PRK09061, PRK09061, D-glutamate deacylase; Validat	0.002
TIGR02318	376	TIGR02318, phosphono_phnM, phosphonate metabolism	0.003
cd01309	359	cd01309, Met_dep_hydrolase_C, Metallo-dependent hy	0.003

>gnl|CDD|178392 PLN02795, PLN02795, allantoinase

 Score =  666 bits (1719), Expect = 0.0
 Identities = 276/396 (69%), Positives = 325/396 (82%), Gaps = 4/396 (1%)

Query: 1   MENLNLQWRLLPTLTLLAASLFLLVFKDSAKL-SHSECSLLPYNQYWLTSKRIVTPKGVI 59
           ME+  LQ R+LP L LLA  +F  +F  +  L     CSLLP+  + L SKR+VTP GVI
Sbjct: 1   MESALLQLRILPLLALLATLVFFFLFAPALPLQGRDRCSLLPWPHFVLYSKRVVTPAGVI 60

Query: 60  SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP 119
            GAVE++ G I+S+  EE+ P++ K   V+DYG AV+MPGLIDVH HL++PGRTEWEGFP
Sbjct: 61  PGAVEVEGGRIVSVTKEEEAPKSQKKPHVLDYGNAVVMPGLIDVHVHLNEPGRTEWEGFP 120

Query: 120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNA 179
           +GTKAAAAGGITTL+DMPLNS PST S ETL+LK++AA+ ++YVDVGFWGGLVPENA+NA
Sbjct: 121 TGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKGKLYVDVGFWGGLVPENAHNA 180

Query: 180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER 239
           S LE LL+AG LGLKSFMCPSGINDFPMT A+HIK  L VLA+Y RPLLVHAE+    E 
Sbjct: 181 SVLEELLDAGALGLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVES 240

Query: 240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS 299
             +L+    D RSYSTYLK+RPPSWE+ AIR+LL VAKDTR  G AEGAH+HIVHLSDA 
Sbjct: 241 DSRLDA---DPRSYSTYLKSRPPSWEQEAIRQLLEVAKDTRPGGVAEGAHVHIVHLSDAE 297

Query: 300 SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMD 359
           SSL+L+ EAK  GDS+TVETCPHYLAFSAEEIPDGDTR+KCAPPIRDAAN+E LW+AL+D
Sbjct: 298 SSLELIKEAKAKGDSVTVETCPHYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLD 357

Query: 360 GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           G IDMLSSDHSP+ P+LKLL+EGNFL+AWGGISSLQ
Sbjct: 358 GDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQ 393

Length = 505

>gnl|CDD|238640 cd01315, L-HYD_ALN, L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology)

 Score =  485 bits (1251), Expect = e-171
 Identities = 179/353 (50%), Positives = 235/353 (66%), Gaps = 15/353 (4%)

Query: 45  YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVH 104
             + + R+VTP GV    + +K G I +I  +       +   V+D G  V+MPGLID H
Sbjct: 2   LVIKNGRVVTPDGVREADIAVKGGKIAAIGPDIANTEAEE---VIDAGGLVVMPGLIDTH 58

Query: 105 AHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164
            H+++PGRTEWEGF +GTKAAAAGGITT+IDMPLNS P T + E L+ K++AA+ +++VD
Sbjct: 59  VHINEPGRTEWEGFETGTKAAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVD 118

Query: 165 VGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK 224
           VGFWGGLVP    N   L  L  AGV+G K F+CPSG+++FP  +   ++E +  LA+  
Sbjct: 119 VGFWGGLVP---GNLDQLRPLDEAGVVGFKCFLCPSGVDEFPAVDDEQLEEAMKELAKTG 175

Query: 225 RPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGP 284
             L VHAE  + +E   +        R Y  YL +RP   E  AI+ +L +AK+T     
Sbjct: 176 SVLAVHAENPEITEALQEQAKAK-GKRDYRDYLASRPVFTEVEAIQRILLLAKET----- 229

Query: 285 AEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI 344
             G  LHIVHLS A + + L+ EA+  G  +TVETCPHYL F+AE++PDG T FKCAPPI
Sbjct: 230 --GCRLHIVHLSSAEA-VPLIREARAEGVDVTVETCPHYLTFTAEDVPDGGTEFKCAPPI 286

Query: 345 RDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG 397
           RDAAN+E+LWEAL +G IDM+ SDHSP  PELKLL +G+F KAWGGIS LQ+G
Sbjct: 287 RDAANQEQLWEALENGDIDMVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLG 339

But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid. Length = 447

>gnl|CDD|163175 TIGR03178, allantoinase, allantoinase

 Score =  376 bits (968), Expect = e-128
 Identities = 163/349 (46%), Positives = 220/349 (63%), Gaps = 18/349 (5%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAH 106
           +   R++ P G     V +K G I +I  +   P      +++D G  V+ PG++D H H
Sbjct: 4   IRGGRVILPNGEREADVGVKGGKIAAIGPDILGP----AAKIIDAGGLVVFPGVVDTHVH 59

Query: 107 LDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVG 166
           +++PGRTEWEGF +GT+AAAAGGITT IDMPLNS P+T +  +L+ K +AA+ ++ VDVG
Sbjct: 60  INEPGRTEWEGFETGTRAAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVG 119

Query: 167 FWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP 226
           FWGGLVP   YN   L  L  AGV+G K+F+ PSG ++FP  +   + +G+  LAR  + 
Sbjct: 120 FWGGLVP---YNLDDLRELDEAGVVGFKAFLSPSGDDEFPHVDDWQLYKGMRELARLGQL 176

Query: 227 LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAE 286
           LLVHAE    +   +  E           YL +RP   E  AIR  L +AK T       
Sbjct: 177 LLVHAENPAITSA-LGEEAPPQGGVGADAYLASRPVFAEVEAIRRTLALAKVT------- 228

Query: 287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD 346
           G  +H+VHLS ++ +++L+ EAK  G  +TVETCPHYL  +AEE+PDG T  KCAPPIRD
Sbjct: 229 GCRVHVVHLS-SAEAVELITEAKQEGLDVTVETCPHYLTLTAEEVPDGGTLAKCAPPIRD 287

Query: 347 AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
            AN+E LWEAL++G ID + SDHSP  P+LK    G+F KAWGGI+ LQ
Sbjct: 288 LANQEGLWEALLNGLIDCVVSDHSPCTPDLK--RAGDFFKAWGGIAGLQ 334

This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases. Length = 443

>gnl|CDD|235732 PRK06189, PRK06189, allantoinase; Provisional

 Score =  295 bits (756), Expect = 2e-96
 Identities = 141/347 (40%), Positives = 194/347 (55%), Gaps = 24/347 (6%)

Query: 52  IVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG 111
           +VTP+GV    + IK G I  I  E   P      +++D     + PG+IDVH H ++PG
Sbjct: 12  VVTPEGVYRADIGIKNGKIAEIAPEISSP----AREIIDADGLYVFPGMIDVHVHFNEPG 67

Query: 112 RTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL 171
           RT WEGF +G+ A AAGG TT  DMPLNS P T++ E L  K + A ++  VD   WGGL
Sbjct: 68  RTHWEGFATGSAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALWGGL 127

Query: 172 VPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA 231
           VP    N   L  L  AGV+G K+FM  SG ++F  ++   + EG+  +A   + L +HA
Sbjct: 128 VPG---NLEHLRELAEAGVIGFKAFMSNSGTDEFRSSDDLTLYEGMKEIAALGKILALHA 184

Query: 232 E---MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA 288
           E   + +      + +  T D R    YL++RP   E  A++  L  A++T       G 
Sbjct: 185 ESDALTRHLTTQARQQGKT-DVRD---YLESRPVVAELEAVQRALLYAQET-------GC 233

Query: 289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAA 348
            LH VH+S    ++ L+ EAK  G  ++VETCPHYL F+ E+        KCAPP+R  +
Sbjct: 234 PLHFVHISSG-KAVALIAEAKKRGVDVSVETCPHYLLFTEEDFERIGAVAKCAPPLRSRS 292

Query: 349 NKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
            KE+LW  L+ G IDM+SSDHSP  PELK  +  +F   WGGIS  Q
Sbjct: 293 QKEELWRGLLAGEIDMISSDHSPCPPELK--EGDDFFLVWGGISGGQ 337

Length = 451

>gnl|CDD|223122 COG0044, PyrC, Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]

 Score =  259 bits (664), Expect = 7e-83
 Identities = 118/346 (34%), Positives = 171/346 (49%), Gaps = 26/346 (7%)

Query: 50  KRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD 109
            R+V P       + IK+G I +I         +   +++D    +++PGL+D+H H  +
Sbjct: 8   ARVVDPGEDEVADILIKDGKIAAIGKN---LEPTSGAEIIDAKGLLVLPGLVDLHVHFRE 64

Query: 110 PGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169
           PG    E F +G++AAAAGG+TT++DMP    P   + E L+ K++ A+ +  VD  F+G
Sbjct: 65  PGFEHKETFETGSRAAAAGGVTTVVDMPNTKPPID-TAEALEDKLERAKGKSVVDYAFYG 123

Query: 170 GLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV 229
           GL      N   LE        G K FM  S        +   ++E L   A     +LV
Sbjct: 124 GLTK---GNLGKLELTERGVEAGFKGFMDDST----GALDDDVLEEALEYAAELGALILV 176

Query: 230 HAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289
           HAE +      V  E      R+    L  RPP  E +AI   L +A+ T       GA 
Sbjct: 177 HAEDDDLIAEGVMNEG----LRAPELGLAGRPPIAEASAIARDLELARAT-------GAR 225

Query: 290 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAAN 349
           +HI H+S   S ++L+  AK  G  +T E  PH+L    E+I D  T  K  PP+RD  +
Sbjct: 226 VHICHISTKES-VELIRAAKAEGIRVTAEVTPHHLLLDEEDIEDLGTLAKVNPPLRDEED 284

Query: 350 KEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           +E LWEAL DG ID+++SDH+P   E K L    F +A  GI  L+
Sbjct: 285 REALWEALKDGVIDVIASDHAPHTLEEKRLP---FEEAPSGIPGLE 327

Length = 430

>gnl|CDD|169193 PRK08044, PRK08044, allantoinase; Provisional

 Score =  252 bits (646), Expect = 4e-80
 Identities = 127/342 (37%), Positives = 184/342 (53%), Gaps = 34/342 (9%)

Query: 63  VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT 122
           + +K G I +I  +          +V+D    V+ PG++D H H+ +PGR+ WEG+ +GT
Sbjct: 23  IAVKGGKIAAIGQD-----LGDAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETGT 77

Query: 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASAL 182
           +AAA GGITT+I+MPLN  P+T+   +++LK DAA+ ++ +D    GGLV    YN   L
Sbjct: 78  RAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVS---YNLDRL 134

Query: 183 EALLNAGVLGLKSFMCPSGI----NDFPMTNASHIKEGLSVLARYKRPLLVHAEM----- 233
             L   GV+G K F+   G     NDF   N     +G   L    +P+LVH E      
Sbjct: 135 HELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCENALICD 194

Query: 234 EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIV 293
           E G E   K E       +   Y+ +RP   E  AIR +L +AK         G  LH+ 
Sbjct: 195 ELGEE--AKREGRV----TAHDYVASRPVFTEVEAIRRVLYLAKVA-------GCRLHVC 241

Query: 294 HLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKL 353
           H+S +   ++ +  A+  G  +T E+CPHY     ++  +  T  KC+PPIRD  N++ +
Sbjct: 242 HIS-SPEGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGM 300

Query: 354 WEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           WE L +G ID L SDHSP  PE+K    GN ++AWGGI+ LQ
Sbjct: 301 WEKLFNGEIDCLVSDHSPCPPEMK---AGNIMEAWGGIAGLQ 339

Length = 449

>gnl|CDD|238643 cd01318, DHOase_IIb, Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis

 Score =  182 bits (463), Expect = 7e-54
 Identities = 92/303 (30%), Positives = 134/303 (44%), Gaps = 33/303 (10%)

Query: 95  VIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKV 154
           +I+PG+ID+H H  +PG T  E F SG++AAAAGG+TT++DMP N+ P T + E L  K+
Sbjct: 3   LILPGVIDIHVHFREPGLTYKEDFVSGSRAAAAGGVTTVMDMP-NTKPPTTTAEALYEKL 61

Query: 155 DAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIK 214
             A  +  VD G + G+      +   L+    AG    K FM  S  +          +
Sbjct: 62  RLAAAKSVVDYGLYFGVTGSE--DLEELDKAPPAGY---KIFMGDSTGDLL------DDE 110

Query: 215 EGL-SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELL 273
           E L  + A     +  HAE E     + K                 R       A    L
Sbjct: 111 ETLERIFAEGSVLVTFHAEDEDRLRENRKELKGESAHPRI------RDAEAAAVATARAL 164

Query: 274 TVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD 333
            +A+         GA LHI H+S      + L   K     +TVE  PH+L    E+   
Sbjct: 165 KLARRH-------GARLHICHVSTP----EELKLIKKAKPGVTVEVTPHHLFLDVEDYDR 213

Query: 334 GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISS 393
             T  K  PP+R   +++ L +AL DG ID+++SDH+P   E K      +  A  GI  
Sbjct: 214 LGTLGKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEK---RKGYPAAPSGIPG 270

Query: 394 LQV 396
           ++ 
Sbjct: 271 VET 273

This group contains the archeal members of the DHOase family. Length = 361

>gnl|CDD|233153 TIGR00857, pyrC_multi, dihydroorotase, multifunctional complex type

 Score =  172 bits (438), Expect = 1e-49
 Identities = 100/287 (34%), Positives = 141/287 (49%), Gaps = 23/287 (8%)

Query: 88  VVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIST 147
           V+D    +++PG ID+H HL DPG    E   SG+KAAA GG TT+ DMP N+ P   + 
Sbjct: 29  VIDAKGLLVLPGFIDLHVHLRDPGEEYKEDIESGSKAAAHGGFTTVADMP-NTKPPIDTP 87

Query: 148 ETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEA--LLNAGVLGLKSFMCPSGI-ND 204
           ETL+ K+   +K   VDV  +GG V +        EA  L  AG +G       S + + 
Sbjct: 88  ETLEWKLQRLKKVSLVDVHLYGG-VTQGNQGKELTEAYELKEAGAVGRMFTDDGSEVQDI 146

Query: 205 FPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW 264
             M  A        V      P+ +HAE        V  E       +    L  RPP  
Sbjct: 147 LSMRRALEYAAIAGV------PIALHAEDPDLIYGGVMHE----GPSAAQLGLPARPPEA 196

Query: 265 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYL 324
           EE A+  LL +AK         G  +HI H+S    SL+L+++AK+ G  IT E  PH+L
Sbjct: 197 EEVAVARLLELAKHA-------GCPVHICHISTK-ESLELIVKAKSQGIKITAEVTPHHL 248

Query: 325 AFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371
             S E++   D   K  PP+R+  ++  L E L DG ID++++DH+P
Sbjct: 249 LLSEEDVARLDGNGKVNPPLREKEDRLALIEGLKDGIIDIIATDHAP 295

In contrast to the homodimeric type of dihydroorotase found in E. coli, this class tends to appear in a large, multifunctional complex with aspartate transcarbamoylase. Homologous domains appear in multifunctional proteins of higher eukaryotes. In some species, including Pseudomonas putida and P. aeruginosa, this protein is inactive but is required as a non-catalytic subunit of aspartate transcarbamoylase (ATCase). In these species, a second, active dihydroorotase is also present. The seed for this model does not include any example of the dihydroorotase domain of eukaryotic multidomain pyrimidine synthesis proteins. All proteins described by This model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase [Purines, pyrimidines, nucleosides, and nucleotides, Pyrimidine ribonucleotide biosynthesis]. Length = 411

>gnl|CDD|238627 cd01302, Cyclic_amidohydrolases, Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids

 Score =  168 bits (427), Expect = 8e-49
 Identities = 93/302 (30%), Positives = 143/302 (47%), Gaps = 52/302 (17%)

Query: 95  VIMPGLIDVHAHLDDPGRTEWEG-FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLK 153
           +++PG ID+H HL DPG T ++  F SG++AAAAGG+TT+IDMP N+ P  I    ++LK
Sbjct: 2   LVLPGFIDIHVHLRDPGGTTYKEDFESGSRAAAAGGVTTVIDMP-NTGPPPIDLPAIELK 60

Query: 154 VDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHI 213
           +  AE+  YVD  F  G+ P +  +   L+ L +AG+  LK FM       F + + + +
Sbjct: 61  IKLAEESSYVDFSFHAGIGPGDVTD--ELKKLFDAGINSLKVFMNYYFGELFDVDDGT-L 117

Query: 214 KEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELL 273
                 +A    P++VHAE                                         
Sbjct: 118 MRTFLEIASRGGPVMVHAER--------------------------------------AA 139

Query: 274 TVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD 333
            +A++        GA++HI H+S    +L+L+  AK  G  +T E CPH+L      +  
Sbjct: 140 QLAEEA-------GANVHIAHVSSG-EALELIKFAKNKGVKVTCEVCPHHLFLDESMLRL 191

Query: 334 GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISS 393
                K  PP+R   ++E LWE + +G ID ++SDH+P   E K     +  KA  G   
Sbjct: 192 NGAWGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESG-KDIWKAPPGFPG 250

Query: 394 LQ 395
           L+
Sbjct: 251 LE 252

Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines. Length = 337

>gnl|CDD|181632 PRK09060, PRK09060, dihydroorotase; Validated

 Score =  169 bits (430), Expect = 3e-48
 Identities = 105/339 (30%), Positives = 165/339 (48%), Gaps = 51/339 (15%)

Query: 52  IVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG 111
           +V P G     + I++G I +I         +  G+V+D     ++PG+ID   H  +PG
Sbjct: 14  VVNPDGEGRADIGIRDGRIAAIGD----LSGASAGEVIDCRGLHVLPGVIDSQVHFREPG 69

Query: 112 RTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL 171
               E   +G++AA  GG+T + +MP N++P T + E L  K+  A  R++ D  F+ G 
Sbjct: 70  LEHKEDLETGSRAAVLGGVTAVFEMP-NTNPLTTTAEALADKLARARHRMHCDFAFYVGG 128

Query: 172 VPENAYNASALEALLNAGVLGLKSFMCPSG----INDFPMTNASHIKEGL-SVLARYKRP 226
             +NA   + LE L   G  G+K FM  S     + D          EGL  +L   +R 
Sbjct: 129 TRDNADELAELERL--PGCAGIKVFMGSSTGDLLVED---------DEGLRRILRNGRRR 177

Query: 227 LLVHAEMEK--GSERHVKLEDDTLDTRSYSTYLKTRPPSW--EEAAI---RELLTVAKDT 279
              H+E E      + +++E D       S++     P W  EEAA+   R L+ +A++T
Sbjct: 178 AAFHSEDEYRLRERKGLRVEGD------PSSH-----PVWRDEEAALLATRRLVRLARET 226

Query: 280 RTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG-DTRF 338
                  G  +H++H+S A   +D L + K   D  TVE  PH+L  +A E  +   T  
Sbjct: 227 -------GRRIHVLHVSTA-EEIDFLADHK---DVATVEVTPHHLTLAAPECYERLGTLA 275

Query: 339 KCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK 377
           +  PPIRDA +++ LW  +  G +D+L SDH+P   E K
Sbjct: 276 QMNPPIRDARHRDGLWRGVRQGVVDVLGSDHAPHTLEEK 314

Length = 444

>gnl|CDD|179417 PRK02382, PRK02382, dihydroorotase; Provisional

 Score =  165 bits (421), Expect = 6e-47
 Identities = 110/331 (33%), Positives = 160/331 (48%), Gaps = 27/331 (8%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
           R+     +    V I  G I ++  + D    S + +V+D    +++PG IDVH H  +P
Sbjct: 10  RVYYNNSLQPRDVRIDGGKITAVGKDLD---GSSSEEVIDARGMLLLPGGIDVHVHFREP 66

Query: 111 GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG 170
           G T  E + +G+++AAAGG+TT++D P N+DP T+  E+   K + A ++  VD G  GG
Sbjct: 67  GYTHKETWYTGSRSAAAGGVTTVVDQP-NTDPPTVDGESFDEKAELAARKSIVDFGINGG 125

Query: 171 LVPENAYNASALEALLNAGVLGL-KSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV 229
           +      N   LE+L   GV  L + FM  S      + +    +E L+  AR      V
Sbjct: 126 VTG----NWDPLESLWERGVFALGEIFMADS-TGGMGI-DEELFEEALAEAARLGVLATV 179

Query: 230 HAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289
           HAE E   +   KL     D  ++S Y   RP + E AA+   L VA +T       GA 
Sbjct: 180 HAEDEDLFDELAKLLKGDADADAWSAY---RPAAAEAAAVERALEVASET-------GAR 229

Query: 290 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAAN 349
           +HI H+S     +D           IT E  PH+L  S  +     T  K  PP+R    
Sbjct: 230 IHIAHIS-TPEGVDAARREG-----ITCEVTPHHLFLSRRDWERLGTFGKMNPPLRSEKR 283

Query: 350 KEKLWEALMDGHIDMLSSDHSPTVPELKLLD 380
           +E LWE L DG ID+++SDH+P   E K  D
Sbjct: 284 REALWERLNDGTIDVVASDHAPHTREEKDAD 314

Length = 443

>gnl|CDD|236479 PRK09357, pyrC, dihydroorotase; Validated

 Score =  164 bits (417), Expect = 2e-46
 Identities = 112/378 (29%), Positives = 177/378 (46%), Gaps = 77/378 (20%)

Query: 45  YWLTSKRIVTPKGVISGA-VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDV 103
             + + R++ PKG+   A V I +G I +I    +    ++  +V+D    V+ PGL+D+
Sbjct: 3   ILIKNGRVIDPKGLDEVADVLIDDGKIAAIGENIE----AEGAEVIDATGLVVAPGLVDL 58

Query: 104 HAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYV 163
           H HL +PG+ + E   +G++AAAAGG TT++ MP N+ P   + E ++  +D A++   V
Sbjct: 59  HVHLREPGQEDKETIETGSRAAAAGGFTTVVAMP-NTKPVIDTPEVVEYVLDRAKEAGLV 117

Query: 164 DV--------GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND-FPMTNASHIK 214
           DV        G  G  + E         AL  AGV+           +D  P+ +A  ++
Sbjct: 118 DVLPVGAITKGLAGEELTE-------FGALKEAGVVAFS--------DDGIPVQDARLMR 162

Query: 215 EGLSVLARYKRPL-LVHAEMEKGSERHVKLEDDTLDTRSYSTY--------------LKT 259
             L     Y + L L+ A+           ED +L      T               L  
Sbjct: 163 RAL----EYAKALDLLIAQHC---------EDPSL------TEGGVMNEGEVSARLGLPG 203

Query: 260 RPPSWEEAAI-RELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVE 318
            P   EE  I R++L  A+ T       GA +HI H+S A S ++L+  AK  G  +T E
Sbjct: 204 IPAVAEEVMIARDVLL-AEAT-------GARVHICHVSTAGS-VELIRWAKALGIKVTAE 254

Query: 319 TCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKL 378
             PH+L  + E++   D  +K  PP+R   ++E L E L DG ID +++DH+P   E K 
Sbjct: 255 VTPHHLLLTDEDLLTYDPNYKVNPPLRTEEDREALIEGLKDGTIDAIATDHAPHAREEKE 314

Query: 379 LDEGNFLKAWGGISSLQV 396
            +   F  A  GI+ L+ 
Sbjct: 315 CE---FEAAPFGITGLET 329

Length = 423

>gnl|CDD|238642 cd01317, DHOase_IIa, Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis

 Score =  159 bits (404), Expect = 5e-45
 Identities = 100/312 (32%), Positives = 149/312 (47%), Gaps = 24/312 (7%)

Query: 85  TGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPST 144
             +V+D    ++ PGL+D+H HL +PG    E   SG KAAAAGG TT++ MP N++P  
Sbjct: 1   DAEVIDAEGKILAPGLVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMP-NTNPVI 59

Query: 145 ISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNA-SALEALLNAGVLGLKSFMCPSGIN 203
            +   ++L  + A+    V V   G L         + +  LL AG +G          +
Sbjct: 60  DNPAVVELLKNRAKDVGIVRVLPIGALTKGLKGEELTEIGELLEAGAVGF-------SDD 112

Query: 204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPS 263
             P+ +A  ++  L   A    P++VH E +        + +  + +R     L   PP 
Sbjct: 113 GKPIQDAELLRRALEYAAMLDLPIIVHPE-DPSLAGGGVMNEGKVASRLG---LPGIPPE 168

Query: 264 WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHY 323
            E   +   L +A+ T       GA +H  HLS A S L+L+ +AK  G  +T E  PH+
Sbjct: 169 AETIMVARDLELAEAT-------GARVHFQHLSTARS-LELIRKAKAKGLPVTAEVTPHH 220

Query: 324 LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGN 383
           L    E +   DT  K  PP+R   ++E L EAL DG ID ++SDH+P   E K L    
Sbjct: 221 LLLDDEALESYDTNAKVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDLP--- 277

Query: 384 FLKAWGGISSLQ 395
           F +A  GI  L+
Sbjct: 278 FAEAPPGIIGLE 289

This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth. Length = 374

>gnl|CDD|238639 cd01314, D-HYD, D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin

 Score =  155 bits (393), Expect = 7e-43
 Identities = 95/352 (26%), Positives = 152/352 (43%), Gaps = 27/352 (7%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            IVT  G     + I++G I++I    + P   +    +D     ++PG ID H HL+ P
Sbjct: 7   TIVTADGSFKADILIEDGKIVAIGPNLEAPGGVEV---IDATGKYVLPGGIDPHTHLELP 63

Query: 111 --GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168
             G    + F SGT+AAAAGG TT+ID  + +   ++  E ++     A+ +  +D GF 
Sbjct: 64  FMGTVTADDFESGTRAAAAGGTTTIIDFAIPNKGQSL-LEAVEKWRGKADGKSVIDYGFH 122

Query: 169 GGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLL 228
             +          L  L+  G+   K FM   G+    M +   + + L         ++
Sbjct: 123 MIITDWTDSVIEELPELVKKGISSFKVFMAYKGLL---MVDDEELLDVLKRAKELGALVM 179

Query: 229 VHAEMEKGS---ERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285
           VHAE   G    E   KL         Y     +RPP  E  A    + +A+        
Sbjct: 180 VHAE--NGDVIAELQKKLLAQGKTGPEYHAL--SRPPEVEAEATARAIRLAELA------ 229

Query: 286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDT---RFKCAP 342
            GA L+IVH+S +  + D +  A+  G  +  ETCP YL     +         ++ C+P
Sbjct: 230 -GAPLYIVHVS-SKEAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDWFEGAKYVCSP 287

Query: 343 PIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSL 394
           P+R   ++E LW+ L  G +  + SDH P     K   + +F K   G+  +
Sbjct: 288 PLRPKEDQEALWDGLSSGTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPGV 339

The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues. Length = 447

>gnl|CDD|236055 PRK07575, PRK07575, dihydroorotase; Provisional

 Score =  137 bits (348), Expect = 1e-36
 Identities = 95/333 (28%), Positives = 151/333 (45%), Gaps = 49/333 (14%)

Query: 51  RIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD 109
           RI+ P G ++ G V +++G I++I  E      +    V+D     ++PG+ID   H  +
Sbjct: 11  RILLPSGELLLGDVLVEDGKIVAIAPEIS---ATAVDTVIDAEGLTLLPGVIDPQVHFRE 67

Query: 110 PGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169
           PG    E   + ++A A GG+T+ ++MP N+ P T +   L  K+  A ++  V+ GF+ 
Sbjct: 68  PGLEHKEDLFTASRACAKGGVTSFLEMP-NTKPLTTTQAALDDKLARAAEKCVVNYGFFI 126

Query: 170 GLVPENAYNASALEALLNA-GVLGLKSFMCPSGINDFPMTNASH-----IKEGL--SVLA 221
           G  P+N      L  LL A    G+K FM            +SH      +E     + A
Sbjct: 127 GATPDN------LPELLTANPTCGIKIFM-----------GSSHGPLLVDEEAALERIFA 169

Query: 222 RYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAI---RELLTVAKD 278
              R + VHAE +              D   +S          EEAA+   R  L ++K 
Sbjct: 170 EGTRLIAVHAEDQARIRARRAEFAGISDPADHSQIQD------EEAALLATRLALKLSKK 223

Query: 279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRF 338
            +         LHI+HLS A    +LL + K +   +T E  P +L  + +      T  
Sbjct: 224 YQR-------RLHILHLSTA-IEAELLRQDKPS--WVTAEVTPQHLLLNTDAYERIGTLA 273

Query: 339 KCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371
           +  PP+R   + E LW+AL DG ID +++DH+P
Sbjct: 274 QMNPPLRSPEDNEALWQALRDGVIDFIATDHAP 306

Length = 438

>gnl|CDD|236240 PRK08323, PRK08323, phenylhydantoinase; Validated

 Score =  137 bits (349), Expect = 2e-36
 Identities = 97/364 (26%), Positives = 154/364 (42%), Gaps = 69/364 (18%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            +VT        V I++G I +I +           +V+D     +MPG ID H H++ P
Sbjct: 9   TVVTADDTYKADVLIEDGKIAAIGANLG-------DEVIDATGKYVMPGGIDPHTHMEMP 61

Query: 111 --GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDA----AEKRIYVD 164
             G    + F +GT+AAA GG TT+ID  L         ++L+  ++A    A  +  +D
Sbjct: 62  FGGTVSSDDFETGTRAAACGGTTTIIDFALQP-----KGQSLREALEAWHGKAAGKAVID 116

Query: 165 VGFWGGL--VPENAYNASALEALLNAGVLGLKSFMCPSG---INDFPMTNASHIKEGLSV 219
            GF   +    E   +   +  L+  G+   K FM   G   ++D  +  A      L  
Sbjct: 117 YGFHMIITDWNEVVLDE--MPELVEEGITSFKLFMAYKGALMLDDDELLRA------LQR 168

Query: 220 LARYKRPLLVHAE------------MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEA 267
            A      +VHAE            + +G             T      L +RPP  E  
Sbjct: 169 AAELGALPMVHAENGDAIAYLQAKLLAEG------------KTGPEYHAL-SRPPEVEGE 215

Query: 268 AIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFS 327
           A    + +A+         GA L+IVH+S    +L+ +  A+  G  +  ETCP YL   
Sbjct: 216 ATNRAIMLAELA-------GAPLYIVHVS-CKEALEAIRRARARGQRVFGETCPQYLLLD 267

Query: 328 AEEI--PDGDT--RFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEG 382
             E   PD     ++  +PP+RD  +++ LW  L DG + ++++DH P    + K L  G
Sbjct: 268 ESEYDGPDWFEGAKYVMSPPLRDKEHQDALWRGLQDGDLQVVATDHCPFCFEQKKQLGRG 327

Query: 383 NFLK 386
           +F K
Sbjct: 328 DFTK 331

Length = 459

>gnl|CDD|233694 TIGR02033, D-hydantoinase, D-hydantoinase

 Score =  136 bits (345), Expect = 5e-36
 Identities = 95/337 (28%), Positives = 148/337 (43%), Gaps = 32/337 (9%)

Query: 46  WLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHA 105
            +    +V    V    V I+ G I+++ S    P   +   V+D     ++PG IDVH 
Sbjct: 2   LIRGGTVVNADDVFQADVLIEGGKIVAVGSNLQPPDAVE---VIDATGKYVLPGGIDVHT 58

Query: 106 HLDDP--GRTEWEGFPSGTKAAAAGGITTLIDM--PLNSDPSTISTETLKLKVDAAEKRI 161
           HL+ P  G    + F +GTKAAAAGG TT+ID   P   +  T + ET   K   AE + 
Sbjct: 59  HLEMPFGGTVTADDFFTGTKAAAAGGTTTIIDFALPSKGESLTEALETWHEK---AEGKS 115

Query: 162 YVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLA 221
            +D GF   +   N +        +     G+ SF       +  M +   + E L    
Sbjct: 116 VIDYGFHMMITDWNDHVLEEHIPEVVEE--GITSFKVFMAYKNLLMVDDEELFEILKRAK 173

Query: 222 RYKRPLLVHAE----MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277
                L VHAE    + +   R +       +  + S     RPP  E  A+   + +A 
Sbjct: 174 ELGALLQVHAENGDVIAELQARLLAQGKTGPEYHALS-----RPPESEAEAVARAIALAA 228

Query: 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE--EIPDGD 335
               D P     L++VH+S A + +D + EA+  G  +  ETCP YL       + P  +
Sbjct: 229 --LADAP-----LYVVHVSTADA-VDEIAEAREKGQPVYGETCPQYLVLDDTAYDKPGFE 280

Query: 336 -TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371
             ++ C+PP+R+  +++ LW AL  G +  + SDH P
Sbjct: 281 GAKYVCSPPLREKEDQDALWSALSSGALQTVGSDHCP 317

This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme. Length = 454

>gnl|CDD|181716 PRK09236, PRK09236, dihydroorotase; Reviewed

 Score =  130 bits (330), Expect = 5e-34
 Identities = 98/369 (26%), Positives = 148/369 (40%), Gaps = 67/369 (18%)

Query: 42  YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLI 101
             +  + + RIV    +  G V I+ G I  I S            V+D     ++PG+I
Sbjct: 1   MKRILIKNARIVNEGKIFEGDVLIENGRIAKIASSIS---AKSADTVIDAAGRYLLPGMI 57

Query: 102 DVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI 161
           D   H  +PG T      S ++AA AGGIT+ ++MP N++P T + E L+ K   A +R 
Sbjct: 58  DDQVHFREPGLTHKGDIASESRAAVAGGITSFMEMP-NTNPPTTTLEALEAKYQIAAQRS 116

Query: 162 YVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN---DFPMTNASHIKEGLS 218
             +  F+ G    +  N   ++ L    V G+K FM  S  N   D P            
Sbjct: 117 LANYSFYFG-ATND--NLDEIKRLDPKRVCGVKVFMGASTGNMLVDNP-----------E 162

Query: 219 VLARYKR----PLLVHAEME----KGSERHVKLEDDTLDT------RSYSTYLKTRPPSW 264
            L R  R     +  H E          ++ +   D +        RS            
Sbjct: 163 TLERIFRDAPTLIATHCEDTPTIKANLAKYKEKYGDDIPAEMHPLIRS------------ 210

Query: 265 EEAAIR------ELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVE 318
            EA  +       L   AK         G  LH++H+S A   L L          IT E
Sbjct: 211 AEACYKSSSLAVSL---AKKH-------GTRLHVLHISTAKE-LSLFENGPLAEKRITAE 259

Query: 319 TCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKL 378
            C H+L F   +        KC P I+ A+++E L +AL D  ID++++DH+P   E K 
Sbjct: 260 VCVHHLWFDDSDYARLGNLIKCNPAIKTASDREALRQALADDRIDVIATDHAPHTWEEK- 318

Query: 379 LDEGNFLKA 387
             +G + +A
Sbjct: 319 --QGPYFQA 325

Length = 444

>gnl|CDD|235265 PRK04250, PRK04250, dihydroorotase; Provisional

 Score =  128 bits (323), Expect = 2e-33
 Identities = 90/320 (28%), Positives = 135/320 (42%), Gaps = 50/320 (15%)

Query: 58  VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEG 117
           ++ G + I+ G I  I       R+ K  +V+     +I+PGLIDVH HL D   +  E 
Sbjct: 12  IVEGGIGIENGRISKI-----SLRDLKGKEVIKVKGGIILPGLIDVHVHLRDFEESYKET 66

Query: 118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY 177
             SGTKAA  GGIT + DMP N+ P  +  +T + ++  AEK+ Y D      L+  N  
Sbjct: 67  IESGTKAALHGGITLVFDMP-NTKPPIMDEKTYEKRMRIAEKKSYADY-ALNFLIAGNCE 124

Query: 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGS 237
            A  ++A         K FM  S       T     +      A     + VHAE     
Sbjct: 125 KAEEIKADFY------KIFMGAS-------TGGIFSENFEVDYACAPGIVSVHAE----- 166

Query: 238 ERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD 297
                      D      + + RPP  E  AI   L   K  +         LHI H+S 
Sbjct: 167 -----------DPELIREFPE-RPPEAEVVAIERALEAGKKLKKP-------LHICHIST 207

Query: 298 ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEAL 357
               L L++++  N   ++ E  PH+L  + ++        K  PP+R   +++ LWE  
Sbjct: 208 K-DGLKLILKS--NLPWVSFEVTPHHLFLTRKDYERNP-LLKVYPPLRSEEDRKALWENF 263

Query: 358 MDGHIDMLSSDHSPTVPELK 377
               I +++SDH+P   E K
Sbjct: 264 --SKIPIIASDHAPHTLEDK 281

Length = 398

>gnl|CDD|179247 PRK01211, PRK01211, dihydroorotase; Provisional

 Score =  116 bits (293), Expect = 3e-29
 Identities = 85/332 (25%), Positives = 139/332 (41%), Gaps = 54/332 (16%)

Query: 61  GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS 120
             +E+++G I SI  ++D     K        +  I+P   D+H H   PG TE E F +
Sbjct: 16  LEIEVEDGKIKSI--KKDAGNIGKK-----ELKGAILPAATDIHVHFRTPGETEKEDFST 68

Query: 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNAS 180
           GT +A  GG T ++DMP N++           K+     + YVD   +      NA    
Sbjct: 69  GTLSAIFGGTTFIMDMP-NNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSMETGNNA---- 123

Query: 181 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEG-LSVLARYKRPLLVHAEMEKGSER 239
               +L+   +GLK +M  +       TN + I+ G +  +     P+  HAE+ +   +
Sbjct: 124 ---LILDERSIGLKVYMGGT-----TNTNGTDIEGGEIKKINEANIPVFFHAELSECLRK 175

Query: 240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS 299
           H        ++++   +   RP   E  A++ +  +   T+           I H+S   
Sbjct: 176 H------QFESKNLRDHDLARPIECEIKAVKYVKNLDLKTK----------IIAHVSSID 219

Query: 300 SSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMD 359
                L E             PH+L    +++P G +  K  PP+RD   +E+L E  + 
Sbjct: 220 VIGRFLREVT-----------PHHL-LLNDDMPLG-SYGKVNPPLRDRWTQERLLEEYIS 266

Query: 360 GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGI 391
           G  D+LSSDH+P   E    D+  F  A  GI
Sbjct: 267 GRFDILSSDHAPHTEE----DKQEFEYAKSGI 294

Length = 409

>gnl|CDD|184033 PRK13404, PRK13404, dihydropyrimidinase; Provisional

 Score =  115 bits (290), Expect = 2e-28
 Identities = 86/336 (25%), Positives = 143/336 (42%), Gaps = 42/336 (12%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            +VT        + I+ G I ++             + +D    +++PG +D H H+D P
Sbjct: 12  TVVTATDTFQADIGIRGGRIAALGE-----GLGPGAREIDATGRLVLPGGVDSHCHIDQP 66

Query: 111 ---GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF 167
              G    + F +GT +AA GG TT+I         ++  E ++     A  +  +D  F
Sbjct: 67  SGDGIMMADDFYTGTVSAAFGGTTTVIPFAAQHRGQSLR-EAVEDYHRRAAGKAVIDYAF 125

Query: 168 WGGLV---PENAYNASALEALLNAGVLGLKSFMCPSG--INDFPMTNASHIKEGLSVLAR 222
              L+   P        L AL+  G    K FM      ++D  +       + L+V  R
Sbjct: 126 --HLIVADPTEEVLTEELPALIAQGYTSFKVFMTYDDLKLDDRQIL------DVLAVARR 177

Query: 223 YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYST---YLKTRPPSWEEAAIRELLTVAKDT 279
           +   ++VHAE    +   +      L     +    +  +RP   E  A    + +A+  
Sbjct: 178 HGAMVMVHAE----NHDMIAWLTKRLLAAGLTAPKYHAISRPMLAEREATHRAIALAE-- 231

Query: 280 RTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD---- 335
             D P     + IVH+S   +  + +  A+  G  I  ETCP YL  +AE++ D      
Sbjct: 232 LVDVP-----ILIVHVSGREA-AEQIRRARGRGLKIFAETCPQYLFLTAEDL-DRPGMEG 284

Query: 336 TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371
            ++ C+PP RD AN+E +W  L DG  ++ SSDH+P
Sbjct: 285 AKYICSPPPRDKANQEAIWNGLADGTFEVFSSDHAP 320

Length = 477

>gnl|CDD|234738 PRK00369, pyrC, dihydroorotase; Provisional

 Score = 98.7 bits (246), Expect = 7e-23
 Identities = 79/311 (25%), Positives = 125/311 (40%), Gaps = 66/311 (21%)

Query: 67  EGNIISIVSEEDWPRNSKTGQ-----VVDYGE-AVIMPGLIDVHAHLDDPGRTEWEGFPS 120
              I  I    D  R  K  +      +D  +  +I+PG ID+H HL     +  E   S
Sbjct: 12  GKEIKEICINFD--RRIKEIKSRCKPDLDLPQGTLILPGAIDLHVHLRGLKLSYKEDVAS 69

Query: 121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNAS 180
           GT  AA GG+T + DMP N+ P   + E +  K+   E    VD   + G V ++     
Sbjct: 70  GTSEAAYGGVTLVADMP-NTIPPLNTPEAITEKLAELEYYSRVDYFVYSG-VTKD----- 122

Query: 181 ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH 240
             E +    + G K F  P  +           +E   VL + ++  ++H E+       
Sbjct: 123 -PEKVDKLPIAGYKIF--PEDLER---------EETFRVLLKSRKLKILHPEV------P 164

Query: 241 VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS 300
           + L+ +           K R   W E A    +            +  ++HI H S+  +
Sbjct: 165 LALKSNR----------KLRRNCWYEIAALYYVK-----------DYQNVHITHASNPRT 203

Query: 301 SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG 360
               +  AK  G   TV+  PH+L  + E     D   K  PPIRD   +  L +AL + 
Sbjct: 204 ----VRLAKELG--FTVDITPHHLLVNGE----KDCLTKVNPPIRDINERLWLLQALSE- 252

Query: 361 HIDMLSSDHSP 371
            +D ++SDH+P
Sbjct: 253 -VDAIASDHAP 262

Length = 392

>gnl|CDD|238641 cd01316, CAD_DHOase, The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis

 Score = 97.1 bits (242), Expect = 1e-22
 Identities = 83/283 (29%), Positives = 130/283 (45%), Gaps = 64/283 (22%)

Query: 95  VIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKV 154
           + +PGLIDVH HL +PG T  E F SGTKAA AGG T +  MP N++PS +   +LKL  
Sbjct: 3   IRLPGLIDVHVHLREPGATHKEDFASGTKAALAGGFTMVRAMP-NTNPSIVDVASLKLVQ 61

Query: 155 DAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIK 214
             A+ +   D  F  G    NA         L +  +GLK ++     N+   T ++ I 
Sbjct: 62  SLAQAKARCDYAFSIGATSTNAATVGE----LASEAVGLKFYL-----NE---TFSTLIL 109

Query: 215 EGLSVLARY------KRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA 268
           + ++  A +       +P++ HA+                     S  L         AA
Sbjct: 110 DKITAWASHFNAWPSTKPIVTHAK---------------------SQTL---------AA 139

Query: 269 IRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA 328
           +  LL  +   R         +HI H+S     ++L+  AK  G  +T E  PH+L  S 
Sbjct: 140 V--LLLASLHNR--------SIHICHVSSKEE-INLIRLAKARGLKVTCEVSPHHLFLSQ 188

Query: 329 EEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371
           +++P G  +++  P +    ++E LWE L   +ID  ++DH+P
Sbjct: 189 DDLPRG--QYEVRPFLPTREDQEALWENL--DYIDCFATDHAP 227

Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate. Length = 344

>gnl|CDD|236002 PRK07369, PRK07369, dihydroorotase; Provisional

 Score = 81.6 bits (202), Expect = 7e-17
 Identities = 80/310 (25%), Positives = 135/310 (43%), Gaps = 24/310 (7%)

Query: 63  VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT 122
           V I++G I +I  E          Q++D    ++ PGL+D+++H  +PG  E E   S  
Sbjct: 24  VLIEDGKIQAI--EPHIDPIPPDTQIIDASGLILGPGLVDLYSHSGEPGFEERETLASLA 81

Query: 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNA-SA 181
            AAAAGG T +  +P ++ P   +  TL      A++   V + FWG L         + 
Sbjct: 82  AAAAAGGFTRVAILP-DTFPPLDNPATLARLQQQAQQIPPVQLHFWGALTLGGQGKQLTE 140

Query: 182 LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHV 241
           L  L  AGV+G          +  P+ N + ++  L  L    +P+ +       +   V
Sbjct: 141 LAELAAAGVVGFT--------DGQPLENLALLRRLLEYLKPLGKPVALWPCDRSLAGNGV 192

Query: 242 KLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS 301
             E       +    L   P S E  A+  LL +     T        +H++ +S A S 
Sbjct: 193 MREGLL----ALRLGLPGDPASAETTALAALLELVAAIGTP-------VHLMRISTARS- 240

Query: 302 LDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH 361
           ++L+ +AK  G  IT  T   +L    E +   D   +  PP+ + ++++ L E +  G 
Sbjct: 241 VELIAQAKARGLPITASTTWMHLLLDTEALASYDPNLRLDPPLGNPSDRQALIEGVRTGV 300

Query: 362 IDMLSSDHSP 371
           ID ++ DH+P
Sbjct: 301 IDAIAIDHAP 310

Length = 418

>gnl|CDD|181059 PRK07627, PRK07627, dihydroorotase; Provisional

 Score = 76.6 bits (189), Expect = 3e-15
 Identities = 79/330 (23%), Positives = 137/330 (41%), Gaps = 52/330 (15%)

Query: 65  IKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKA 124
           +  G I +I      P      + +D    ++ PGL+D+ A L +PG        S   A
Sbjct: 25  VAAGKIAAIGQA---PAGFNADKTIDASGLIVCPGLVDLSARLREPGYEYKATLESEMAA 81

Query: 125 AAAGGITTLI-----DMPLNSDPSTISTETLKLKVDAAEK-RIY----VDVGFWGGLVPE 174
           A AGG+T+L+     D  L+ +P  +  E LK +     +  +Y    + VG  G ++ E
Sbjct: 82  AVAGGVTSLVCPPDTDPVLD-EPGLV--EMLKFRARNLNQAHVYPLGALTVGLKGEVLTE 138

Query: 175 NAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK-----RPLLV 229
                     L  AG +G           + P+ +   +   L   + +      RPL  
Sbjct: 139 MV-------ELTEAGCVGFSQ-------ANVPVVDTQVLLRALQYASTFGFTVWLRPLDA 184

Query: 230 HAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH 289
              + +G           + +R     L   P + E  A+  +  + + T       GA 
Sbjct: 185 F--LGRGGVAA----SGAVASR---LGLSGVPVAAETIALHTIFELMRVT-------GAR 228

Query: 290 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAAN 349
           +H+  LS A+  + L+  AK  G  +T +   +++     +I   D++F+  PP+R   +
Sbjct: 229 VHLARLSSAAG-VALVRAAKAEGLPVTCDVGVNHVHLIDVDIGYFDSQFRLDPPLRSQRD 287

Query: 350 KEKLWEALMDGHIDMLSSDHSPTVPELKLL 379
           +E +  AL DG ID + SDH+P   + KLL
Sbjct: 288 REAIRAALADGTIDAICSDHTPVDDDEKLL 317

Length = 425

>gnl|CDD|178530 PLN02942, PLN02942, dihydropyrimidinase

 Score = 75.7 bits (186), Expect = 7e-15
 Identities = 86/345 (24%), Positives = 147/345 (42%), Gaps = 35/345 (10%)

Query: 63  VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPS 120
           V +++G I+++      P + +   V+D     +MPG ID H HL  P  G    + F S
Sbjct: 25  VYVEDGIIVAVAPNLKVPDDVR---VIDATGKFVMPGGIDPHTHLAMPFMGTETIDDFFS 81

Query: 121 GTKAAAAGGITTLIDMPLNSDPSTIST-ETLKLKVDAAEKRIYVDVGFWGGLVPENAYNA 179
           G  AA AGG T  ID  +  + + ++  E  + K   AEK   +D GF   +   +   +
Sbjct: 82  GQAAALAGGTTMHIDFVIPVNGNLLAGYEAYEKK---AEKSC-MDYGFHMAITKWDDTVS 137

Query: 180 SALEALLNA-GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE----ME 234
             +E L+   G+   K FM   G     M     + EG           +VHAE    + 
Sbjct: 138 RDMETLVKEKGINSFKFFMAYKGS---LMVTDELLLEGFKRCKSLGALAMVHAENGDAVF 194

Query: 235 KGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVH 294
           +G +R ++L     +  + S     RPP  E  A    + +AK   T        L++VH
Sbjct: 195 EGQKRMIELGITGPEGHALS-----RPPLLEGEATARAIRLAKFVNTP-------LYVVH 242

Query: 295 LSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKC----APPIRDAANK 350
           +  +  +++ +  A+ +G  +  E     L     ++ D D         +PPIR A + 
Sbjct: 243 VM-SIDAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTIASKYVMSPPIRPAGHG 301

Query: 351 EKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           + L  AL  G + ++ +DH P     K   + +F K   G++ ++
Sbjct: 302 KALQAALSSGILQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIE 346

Length = 486

>gnl|CDD|222250 pfam13594, Amidohydro_5, Amidohydrolase

 Score = 61.2 bits (149), Expect = 3e-12
 Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 5/69 (7%)

Query: 65  IKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKA 124
           I++G I +I  ++         +V+D     ++PGLID+H HL        E   +G  A
Sbjct: 3   IEDGKIAAIGGDDLPDA---EAEVIDAEGKYVLPGLIDMHVHLG--EEPGRETLETGAAA 57

Query: 125 AAAGGITTL 133
           A AGG+TT+
Sbjct: 58  ALAGGVTTV 66

This family of enzymes are a part of a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included. Length = 66

>gnl|CDD|238617 cd01292, metallo-dependent_hydrolases, Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

 Score = 61.2 bits (148), Expect = 1e-10
 Identities = 56/309 (18%), Positives = 87/309 (28%), Gaps = 89/309 (28%)

Query: 100 LIDVHAHLDDPGRTEWEGFP------------------SGTKAAAAGGITTLIDMPLNSD 141
            ID H HLD                                +A  AGG+TT++DM  ++ 
Sbjct: 1   FIDTHVHLDGSALRGTRLNLELKEAEELSPEDLYEDTLRALEALLAGGVTTVVDMG-STP 59

Query: 142 PSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNAS--------ALEALLNAGVLGL 193
           P T +   ++   +AA     + V    G+    A             L   L  G +GL
Sbjct: 60  PPTTTKAAIEAVAEAARASAGIRVVLGLGIPGVPAAVDEDAEALLLELLRRGLELGAVGL 119

Query: 194 KSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSY 253
           K     +        +   ++  L    +   P+++HA                      
Sbjct: 120 KLAGPYT----ATGLSDESLRRVLEEARKLGLPVVIHAG--------------------- 154

Query: 254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS-SLDLLMEAKTNG 312
                         A+ +L+             G  + I H+S      L+LL EA    
Sbjct: 155 -------ELPDPTRALEDLV--------ALLRLGGRVVIGHVSHLDPELLELLKEAG--- 196

Query: 313 DSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT 372
             +++E CP                       RD    E L   L  G    L +D  P 
Sbjct: 197 --VSLEVCPLSNYLLG----------------RDGEGAEALRRLLELGIRVTLGTDGPPH 238

Query: 373 VPELKLLDE 381
                LL  
Sbjct: 239 PLGTDLLAL 247

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others. Length = 275

>gnl|CDD|181631 PRK09059, PRK09059, dihydroorotase; Validated

 Score = 58.9 bits (143), Expect = 1e-09
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 3/98 (3%)

Query: 47  LTSKRIVTPKGVIS--GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVH 104
           L + RI+ P   +   G V I++G I++           +  ++VD     + PGL+D  
Sbjct: 7   LANARIIDPSRGLDEIGTVLIEDGVIVAAGKGAGNQGAPEGAEIVDCAGKAVAPGLVDAR 66

Query: 105 AHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDP 142
             + +PG    E   S ++AAAAGG+T++I MP ++DP
Sbjct: 67  VFVGEPGAEHRETIASASRAAAAGGVTSIIMMP-DTDP 103

Length = 429

>gnl|CDD|238434 cd00854, NagA, N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate

 Score = 58.7 bits (143), Expect = 2e-09
 Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 3/62 (4%)

Query: 45  YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVH 104
             + + RI+TP G+  GAV +++G I++I  E++     +  +++D     ++PG ID+H
Sbjct: 1   LIIKNARILTPGGLEDGAVLVEDGKIVAIGPEDE---LEEADEIIDLKGQYLVPGFIDIH 57

Query: 105 AH 106
            H
Sbjct: 58  IH 59

This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling. Length = 374

>gnl|CDD|236262 PRK08417, PRK08417, dihydroorotase; Provisional

 Score = 57.8 bits (140), Expect = 3e-09
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 7/96 (7%)

Query: 301 SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG 360
           SL+LL + K+ G+ +  E   H+L        + +T  K  PP+R   ++  L EAL +G
Sbjct: 208 SLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLALLEALKEG 267

Query: 361 HIDMLSSDHSPTVPELKLL--DEGNFLKAWGGISSL 394
            ID L+S HS      K L  DE  F     GI S+
Sbjct: 268 KIDFLTSLHSAKSNSKKDLAFDEAAF-----GIDSI 298

Length = 386

>gnl|CDD|216825 pfam01979, Amidohydro_1, Amidohydrolase family

 Score = 52.6 bits (126), Expect = 1e-07
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 3/69 (4%)

Query: 95  VIMPGLIDVHAHLDDP---GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLK 151
           +++PGLID H HL+ P   G   +E   +G KA    G TT++D P +++ S    + + 
Sbjct: 1   IVLPGLIDAHVHLESPLLRGEDSYEAILTGAKAMLRSGTTTVLDTPTSANTSIPLRKEIM 60

Query: 152 LKVDAAEKR 160
             + AA K 
Sbjct: 61  EGLAAAPKL 69

This family of enzymes are a a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included. Length = 307

>gnl|CDD|224733 COG1820, NagA, N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]

 Score = 52.7 bits (127), Expect = 1e-07
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 45  YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVH 104
           Y L + RI T  GV+ G   + E   I  V   + P +    +++D   A+++PG ID+H
Sbjct: 2   YALKNGRIFTGHGVLDGGAVVIEDGKIEAVVPAELPAD---AEIIDLKGALLVPGFIDLH 58

Query: 105 AH 106
            H
Sbjct: 59  IH 60

Length = 380

>gnl|CDD|237967 PRK15446, PRK15446, phosphonate metabolism protein PhnM; Provisional

 Score = 51.3 bits (124), Expect = 4e-07
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 21/102 (20%)

Query: 43  NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLID 102
            +  L++ R+V P  V+ G++ I++G I +I      P  S     +D     ++PGL+D
Sbjct: 2   MEMILSNARLVLPDEVVDGSLLIEDGRIAAID-----PGASALPGAIDAEGDYLLPGLVD 56

Query: 103 VHA-HLDD-----PGRTEWEGFPSGT------KAAAAGGITT 132
           +H  +L+      PG  +W   P+           AA GITT
Sbjct: 57  LHTDNLEKHLAPRPG-VDW---PADAALAAHDAQLAAAGITT 94

Length = 383

>gnl|CDD|181631 PRK09059, PRK09059, dihydroorotase; Validated

 Score = 50.0 bits (120), Expect = 1e-06
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 1/93 (1%)

Query: 287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD 346
               H   +S A S  + L  AK  G  +T     ++L+ +  +I +  T FK +PP+R 
Sbjct: 231 RGRYHAAQISCAES-AEALRRAKDRGLKVTAGVSINHLSLNENDIGEYRTFFKLSPPLRT 289

Query: 347 AANKEKLWEALMDGHIDMLSSDHSPTVPELKLL 379
             ++  + EA+  G ID++ S H P   + K L
Sbjct: 290 EDDRVAMVEAVASGTIDIIVSSHDPQDVDTKRL 322

Length = 429

>gnl|CDD|221936 pfam13147, Amidohydro_4, Amidohydrolase

 Score = 49.5 bits (117), Expect = 1e-06
 Identities = 62/316 (19%), Positives = 96/316 (30%), Gaps = 51/316 (16%)

Query: 90  DYGEAVIMPGLIDVHAHLDDPGRTE-----WEGFPSGTKAAAAGGITTLIDMPLNSDPST 144
           D    +++PGL+D+H H     ++E          +G  A A  G+T+ +          
Sbjct: 1   DAKGRLVLPGLVDLHVHGRPLDKSEDGGPYRAEAEAGLAALAGAGVTSALLDGGWEPELL 60

Query: 145 ISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYN-ASALEALLNAGVLGLKSFMCPSGIN 203
                          R+ V V   G +   N      AL+ L+        +    S ++
Sbjct: 61  T--------------RLLVRVLVDGLIGLGNLGATLEALKRLVELLEAEGVALPLASVLD 106

Query: 204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPS 263
                       GL  L R                 H   +            L      
Sbjct: 107 G----------PGLEALLRE-----AKKAGLILLVGHAPADLGDGAVEKGLDALFLLALG 151

Query: 264 WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHY 323
            E A    L           P  G  LH++  +      DLL+E      +  +   P  
Sbjct: 152 HEVAEDLHLA------EILDPGAGLGLHVIAAAA-----DLLLEGLVAAHAGGLAVVP-- 198

Query: 324 LAFSAEEIPDGDTRFKCAPPIR-DAANKEKLWEALMDGHIDMLSSDHSP--TVPELKLLD 380
           L     +       FK  PP+R    ++E L E L  G    L SDH+P        LL+
Sbjct: 199 LELLLRDAAAAGVAFKVLPPLRLRERDREALRELLAAGVPVALGSDHAPDSPAGPGDLLE 258

Query: 381 EGNFLKAWGGISSLQV 396
              FL A  G++  + 
Sbjct: 259 AALFLAALAGLTPEEA 274

This family of enzymes are a part of a large metal dependent hydrolase superfamily. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyze the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit. Dihydroorotases (EC:3.5.2.3) are also included. Length = 304

>gnl|CDD|224149 COG1228, HutI, Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 48.9 bits (117), Expect = 2e-06
 Identities = 32/111 (28%), Positives = 43/111 (38%), Gaps = 13/111 (11%)

Query: 56  KGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL--DDPGRT 113
             +  GAV I++G I+++  EE         +V+D     + PGLID H HL        
Sbjct: 24  GIIEDGAVLIEDGKIVAVGPEE--IDIPAGAEVIDAKGKTVTPGLIDAHTHLGFGGSRGG 81

Query: 114 EWE----GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR 160
           E+E    G       AA GGI  L         +T     LK       KR
Sbjct: 82  EFELREAGASYTEILAAGGGILPLD-----RGFTTARDGGLKATALPRLKR 127

Length = 406

>gnl|CDD|223479 COG0402, SsnA, Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]

 Score = 48.6 bits (116), Expect = 4e-06
 Identities = 39/231 (16%), Positives = 69/231 (29%), Gaps = 42/231 (18%)

Query: 55  PKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD----- 109
              +  G + I++G I++I +  +        +V+D    +++PG ++ H HLD      
Sbjct: 17  EGRIEDGDLVIEDGKIVAIGANAE---GPPDEEVIDAKGKLVLPGFVNAHTHLDQTLLRG 73

Query: 110 ----------PGRTEWEGFPSGTKA-------------AAAGGITTLIDMPLNSDPS--T 144
                       R  W                          G TT          S   
Sbjct: 74  LADDLPLLEWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHVDVVAESADA 133

Query: 145 ISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLG-LKSFMCPSGIN 203
                L++ + A    +  DV F       +       E L  A  LG     + P    
Sbjct: 134 AFEAALEVGLRAVLGPVLQDVAFPDPGAETDEELEETEELLREAHGLGRDVVGLAPHFPY 193

Query: 204 DFPMTNASHIKEGLSVLARYKRPLLVHA-----EMEKGSERHVKLEDDTLD 249
                    + E   +  +Y  P+ +H      E+E+  E +     + LD
Sbjct: 194 TVSPELLESLDE---LARKYGLPVHIHLAETLDEVERVLEPYGARPVERLD 241

Length = 421

>gnl|CDD|236478 PRK09356, PRK09356, imidazolonepropionase; Validated

 Score = 47.9 bits (115), Expect = 5e-06
 Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 9/65 (13%)

Query: 51  RIVTPK-------GVIS-GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLID 102
           ++ T         G+I  GA+ I++G I+ +  E D P  +   +V+D G  ++ PGLID
Sbjct: 11  QLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPA-AYAAEVIDAGGKLVTPGLID 69

Query: 103 VHAHL 107
            H HL
Sbjct: 70  CHTHL 74

Length = 406

>gnl|CDD|183965 PRK13308, ureC, urease subunit alpha; Reviewed

 Score = 47.4 bits (113), Expect = 1e-05
 Identities = 39/150 (26%), Positives = 55/150 (36%), Gaps = 26/150 (17%)

Query: 57  GVISGAVEIKEGNIISIVSEEDWPRN----------SKTGQVVDYGEAVIMPGLIDVHAH 106
           G++ G + I++G I+ I    + P                 V      +  PG IDVH H
Sbjct: 83  GIVKGDIGIRDGRIVGIGKAGN-PDIMDGVDPRLVVGPGTDVRPAEGLIATPGAIDVHVH 141

Query: 107 LDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIST--ETLKLKVDAAEKRIYVD 164
            D     +          A A GITT++   L       S         + AAE    V+
Sbjct: 142 FDSAQLVD---------HALASGITTMLGGGLGPTVGIDSGGPFNTGRMLQAAEA-WPVN 191

Query: 165 VGFWGGLVPENAYNASALEALLNAGVLGLK 194
            GF G     N+   +AL   + AG  GLK
Sbjct: 192 FGFLG---RGNSSKPAALIEQVEAGACGLK 218

Length = 569

>gnl|CDD|238628 cd01303, GDEase, Guanine deaminase (GDEase)

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 57  GVISGAVEIKEGNIISIVSEEDWPRNSKTG-QVVDYGEAVIMPGLIDVHAH 106
            V  G + + +GNII+  + E   R +K G +V+D     I+PG ID H H
Sbjct: 23  VVEDGLIVVVDGNIIAAGAAETLKRAAKPGARVIDSPNQFILPGFIDTHIH 73

Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool. Length = 429

>gnl|CDD|225985 COG3454, COG3454, Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]

 Score = 43.5 bits (103), Expect = 1e-04
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 15/99 (15%)

Query: 46  WLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHA 105
            L++ RIV    V++G+V I++G I  I         S     +D     ++PGLI++H 
Sbjct: 2   ILSNARIVLEDRVVNGSVLIRDGLIADID-----EGISPLAAGIDGEGDYLLPGLIELHT 56

Query: 106 -HLDD-----PGRTEWE---GFPSGTKAAAAGGITTLID 135
            +L+      PG   W       +     AA GITT++D
Sbjct: 57  DNLERFMTPRPG-VRWPPIAAILAHDAQLAASGITTVLD 94

Length = 377

>gnl|CDD|232881 TIGR00221, nagA, N-acetylglucosamine-6-phosphate deacetylase

 Score = 43.3 bits (102), Expect = 1e-04
 Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)

Query: 43  NQYWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLI 101
             Y L    IVT   VI +GAV I +G I ++ +E +     K    +D    V+ PG I
Sbjct: 3   ESYLLKDIAIVTGNEVIDNGAVGINDGKISTVSTEAELEPEIKE---IDLPGNVLTPGFI 59

Query: 102 DVHAH 106
           D+H H
Sbjct: 60  DIHIH 64

[Central intermediary metabolism, Amino sugars]. Length = 380

>gnl|CDD|236366 PRK09045, PRK09045, N-ethylammeline chlorohydrolase; Provisional

 Score = 43.4 bits (103), Expect = 1e-04
 Identities = 33/114 (28%), Positives = 46/114 (40%), Gaps = 30/114 (26%)

Query: 53  VTPKGVI--SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL--- 107
           V P GV+    AV I++G I++I+   +        + V+  + V++PGLI+ H H    
Sbjct: 19  VEPAGVVLEDHAVAIRDGRIVAILPRAEARARYAAAETVELPDHVLIPGLINAHTHAAMS 78

Query: 108 ------DD------------PGRTEW--EGF-PSGTKAAAA----GGITTLIDM 136
                 DD            P    W  E F   GT  A A    GG T   DM
Sbjct: 79  LLRGLADDLPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDM 132

Length = 443

>gnl|CDD|238621 cd01296, Imidazolone-5PH, Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate

 Score = 42.6 bits (101), Expect = 2e-04
 Identities = 22/96 (22%), Positives = 37/96 (38%), Gaps = 7/96 (7%)

Query: 63  VEIKEGNIISIVSEEDWPRNSKTG-QVVDYGEAVIMPGLIDVHAHLDDPG--RTEWE--- 116
           + I++G I ++      P       + +D G   + PGL+D H HL   G    E+    
Sbjct: 1   IAIRDGRIAAVGPAASLPAPGPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARL 60

Query: 117 -GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLK 151
            G       AA GGI + +     +    +    L+
Sbjct: 61  AGASYEEILAAGGGILSTVRATRAASEDELFASALR 96

In bacteria, the enzyme is part of histidine utilization (hut) operon. Length = 371

>gnl|CDD|224490 COG1574, COG1574, Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]

 Score = 42.3 bits (100), Expect = 3e-04
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 62  AVEIKEGNIISIVSEEDW-PRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS 120
           AV IK+G I+++ S+ +         +V+D     ++PG +D H HL   G +  E    
Sbjct: 26  AVAIKDGRIVAVGSDAELKALAGPATEVIDLKGKFVLPGFVDAHLHLISGGLSLLELNLD 85

Query: 121 GTKAAAA 127
           G ++   
Sbjct: 86  GVRSLDD 92

Length = 535

>gnl|CDD|223933 COG1001, AdeC, Adenine deaminase [Nucleotide transport and metabolism]

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 24/123 (19%)

Query: 51  RIVTP--KGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD 108
           RIV      +  G + I  G I+ ++ E          +V+D     I+PG ID H H++
Sbjct: 32  RIVDVVTGEIYKGDIAIAGGRIVGVIGEYRAEAT----EVIDAAGRYIVPGFIDAHLHIE 87

Query: 109 DPGRTEWEGFPSG-TKAAAAGGITTLIDMPLNSDPSTIS----TETLKLKVDAAEK---R 160
               T     PS   +A    G TT++     SDP  I+     + ++  +D A++   +
Sbjct: 88  SSMLT-----PSEFARAVLPHGTTTVV-----SDPHEIANVLGEDGIRFMLDEAKETPLK 137

Query: 161 IYV 163
           +YV
Sbjct: 138 VYV 140

Length = 584

>gnl|CDD|238624 cd01299, Met_dep_hydrolase_A, Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

 Score = 41.1 bits (97), Expect = 6e-04
 Identities = 20/61 (32%), Positives = 24/61 (39%), Gaps = 11/61 (18%)

Query: 87  QVVDYGEAVIMPGLIDVHAHL--DDPGRTEWEGFPSGTKAAAAG---------GITTLID 135
           QV+D G   +MPGLID H HL  D          P   +   A          G TT+ D
Sbjct: 2   QVIDLGGKTLMPGLIDAHTHLGSDPGDLPLDLALPVEYRTIRATRQARAALRAGFTTVRD 61

Query: 136 M 136
            
Sbjct: 62  A 62

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. Length = 342

>gnl|CDD|238623 cd01298, ATZ_TRZ_like, TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases

 Score = 41.4 bits (98), Expect = 6e-04
 Identities = 25/103 (24%), Positives = 36/103 (34%), Gaps = 28/103 (27%)

Query: 61  GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL---------DD-- 109
           G V +++G I+++             +V+D    V+MPGL++ H HL         DD  
Sbjct: 20  GDVLVEDGRIVAVGPALP-LPAYPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADDLP 78

Query: 110 ------------PGRTEWEGFPSGTKAAAA----GGITTLIDM 136
                             E    G   A A     G TT  DM
Sbjct: 79  LMEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADM 121

Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD. Length = 411

>gnl|CDD|226473 COG3964, COG3964, Predicted amidohydrolase [General function prediction only]

 Score = 40.9 bits (96), Expect = 8e-04
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 5/89 (5%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAH 106
           LT  R++ P   I     I   N   I + +D+P  ++T Q++D    ++ PGLID+H H
Sbjct: 8   LTGGRLIDPARGIDEITNIAIINGK-IAAADDYPAPAET-QIIDADGCIVSPGLIDLHVH 65

Query: 107 LDDPGRTEWEGFPSGTKAAAAGGITTLID 135
           +   G TE    P      A  G+TT++D
Sbjct: 66  V-YYGGTEGGVRPD--MYGAPNGVTTVVD 91

Length = 386

>gnl|CDD|236423 PRK09237, PRK09237, dihydroorotase; Provisional

 Score = 40.6 bits (96), Expect = 0.001
 Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 8/87 (9%)

Query: 51  RIVTPKGVISGAVE--IKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD 108
           R++ P   I G ++  I++G I ++  +      S+  +V+D     + PG ID+H H+ 
Sbjct: 7   RVIDPANGIDGVIDIAIEDGKIAAVAGD---IDGSQAKKVIDLSGLYVSPGWIDLHVHV- 62

Query: 109 DPGRTEWEGFPSGTKAAAAGGITTLID 135
            PG T +   P         G+TT++D
Sbjct: 63  YPGSTPYGDEPDE--VGVRSGVTTVVD 87

Length = 380

>gnl|CDD|238632 cd01307, Met_dep_hydrolase_B, Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 35/182 (19%), Positives = 68/182 (37%), Gaps = 36/182 (19%)

Query: 67  EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG----T 122
           E   I+ V            Q+VD G   + PG ID+H H+       ++G         
Sbjct: 5   ENGKIAAVGAALAA--PAATQIVDAGGCYVSPGWIDLHVHV-------YQGGTRYGDRPD 55

Query: 123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKV-DAAEKRIY--VDVGFWGGLVPENAYN- 178
                 G+TT++D          + +  +  V + +  R+Y  +++   G +  +   + 
Sbjct: 56  MIGVKSGVTTVVDA---GSAGADNIDGFRYTVIERSATRVYAFLNISRVGLVAQDELPDP 112

Query: 179 ----ASALEALLNAG---VLGLKSFMCPSGINDF---PMTNASHIKEGLSVLARYKRPLL 228
                 A+ A        ++GLK+    S + ++   P+  A  I +   +      PL+
Sbjct: 113 DNIDEDAVVAAAREYPDVIVGLKARASKSVVGEWGIKPLELAKKIAKEADL------PLM 166

Query: 229 VH 230
           VH
Sbjct: 167 VH 168

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. Length = 338

>gnl|CDD|238625 cd01300, YtcJ_like, YtcJ_like metal dependent amidohydrolases

 Score = 40.4 bits (95), Expect = 0.001
 Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 5/71 (7%)

Query: 62  AVEIKEGNIISIVSEED-WPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE----WE 116
           AV +++G I+++ S+ +         +V+D     ++PG ID H+HL   G +       
Sbjct: 1   AVAVRDGRIVAVGSDAEAKALKGPATEVIDLKGKTVLPGFIDSHSHLLLGGLSLLWLDLS 60

Query: 117 GFPSGTKAAAA 127
           G  S  +A A 
Sbjct: 61  GVTSKEEALAR 71

YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling. Length = 479

>gnl|CDD|236369 PRK09061, PRK09061, D-glutamate deacylase; Validated

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 60/270 (22%), Positives = 86/270 (31%), Gaps = 78/270 (28%)

Query: 87  QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDM---------- 136
           + +D    V+ PG ID+HAH                +  A  G+TT +++          
Sbjct: 60  RTIDATGLVVAPGFIDLHAHGQSVA---------AYRMQAFDGVTTALELEAGVLPVARW 110

Query: 137 ---------PLNSDPST------ISTET-LKLKVDAAEKRIYVDVGFWGGLVP---ENAY 177
                    PLN   S       I+  T  + +   A+    +    W        E A 
Sbjct: 111 YAEQAGEGRPLNYGASVGWTPARIAVLTGPQAEGTIADFGKALGDPRWQERAATPAELAE 170

Query: 178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGS 237
               LE  L+ G LG+       G    P T      E   + AR   P   H       
Sbjct: 171 ILELLEQGLDEGALGIGI-----GAGYAPGTGHKEYLELARLAARAGVPTYTHVR----- 220

Query: 238 ERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVH--- 294
                             YL    P     A +EL+  A +T       GAH+HI H   
Sbjct: 221 ------------------YLSNVDPRSSVDAYQELIAAAAET-------GAHMHICHVNS 255

Query: 295 --LSDASSSLDLLMEAKTNGDSITVETCPH 322
             L D    L L+ +A+  G  +T E  P+
Sbjct: 256 TSLRDIDRCLALVEKAQAQGLDVTTEAYPY 285

Length = 509

>gnl|CDD|131371 TIGR02318, phosphono_phnM, phosphonate metabolism protein PhnM

 Score = 39.2 bits (92), Expect = 0.003
 Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 15/99 (15%)

Query: 46  WLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHA 105
            L++ R+V    V+ G+V I++G I  I         +      D    +++PGLID+H 
Sbjct: 1   VLSNARLVLEDEVVEGSVVIEDGAIADIGEGPVALAEAI-----DGEGDLLLPGLIDLHT 55

Query: 106 -HLDD-----PGRTEWE---GFPSGTKAAAAGGITTLID 135
            +L+      PG  +W          K  AA GITT+ D
Sbjct: 56  DNLERHMSPRPG-VDWPIDAAIVEHDKQLAAAGITTVFD 93

This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs [Energy metabolism, Other]. Length = 376

>gnl|CDD|238634 cd01309, Met_dep_hydrolase_C, Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

 Score = 38.8 bits (91), Expect = 0.003
 Identities = 42/205 (20%), Positives = 69/205 (33%), Gaps = 46/205 (22%)

Query: 67  EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD-DPGRTEWEG-------- 117
           +G I+++ +E   P      +V+D     + PGLID H+HL  D      E         
Sbjct: 1   DGKIVAVGAEITTP---ADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANEETD 57

Query: 118 --------------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYV 163
                              K A AGG+TT+  +P +++        +K      E     
Sbjct: 58  PVTPHVRAIDGINPDDEAFKRARAGGVTTVQVLPGSANLIGGQGVVIKTDGGTIEDMFIK 117

Query: 164 -DVGF-------------WGGLVPENAY--NASALEALLNAGVLGLKSFMCPSGINDFPM 207
              G                G  P       A   +A + A   G K  +  +   D P 
Sbjct: 118 APAGLKMALGENPKRVYGGKGKEPATRMGVAALLRDAFIKAQEYGRKYDLGKNAKKDPPE 177

Query: 208 TNASHIK-EGLSVLARYKRPLLVHA 231
            +   +K E L  + + + P+ +HA
Sbjct: 178 RD---LKLEALLPVLKGEIPVRIHA 199

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown. Length = 359

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	399
PLN02795	505	allantoinase	100.0
COG0044	430	PyrC Dihydroorotase and related cyclic amidohydrol	100.0
PRK07369	418	dihydroorotase; Provisional	100.0
PRK07627	425	dihydroorotase; Provisional	100.0
PRK09059	429	dihydroorotase; Validated	100.0
PRK08417	386	dihydroorotase; Provisional	100.0
PRK13404	477	dihydropyrimidinase; Provisional	100.0
PRK06189	451	allantoinase; Provisional	100.0
PRK08044	449	allantoinase; Provisional	100.0
TIGR03178	443	allantoinase allantoinase. This enzyme carries out	100.0
cd01315	447	L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinas	100.0
PRK02382	443	dihydroorotase; Provisional	100.0
PLN02942	486	dihydropyrimidinase	100.0
PRK01211	409	dihydroorotase; Provisional	100.0
TIGR00857	411	pyrC_multi dihydroorotase, multifunctional complex	100.0
PRK08323	459	phenylhydantoinase; Validated	100.0
PRK09060	444	dihydroorotase; Validated	100.0
PRK07575	438	dihydroorotase; Provisional	100.0
cd01314	447	D-HYD D-hydantoinases (D-HYD) also called dihydrop	100.0
KOG2584	522	consensus Dihydroorotase and related enzymes [Nucl	100.0
PRK09357	423	pyrC dihydroorotase; Validated	100.0
TIGR02033	454	D-hydantoinase D-hydantoinase. This model represen	100.0
PRK09236	444	dihydroorotase; Reviewed	100.0
PRK04250	398	dihydroorotase; Provisional	100.0
cd01318	361	DHOase_IIb Dihydroorotase (DHOase), subgroup IIb;	100.0
PRK00369	392	pyrC dihydroorotase; Provisional	100.0
cd01302	337	Cyclic_amidohydrolases Cyclic amidohydrolases, inc	100.0
cd01317	374	DHOase_IIa Dihydroorotase (DHOase), subgroup IIa;	100.0
cd01316	344	CAD_DHOase The eukaryotic CAD protein is a trifunc	100.0
cd01294	335	DHOase Dihydroorotase (DHOase) catalyzes the rever	100.0
PRK09061	509	D-glutamate deacylase; Validated	100.0
PLN02599	364	dihydroorotase	100.0
TIGR00856	341	pyrC_dimer dihydroorotase, homodimeric type. This	100.0
PRK05451	345	dihydroorotase; Provisional	100.0
cd01297	415	D-aminoacylase D-aminoacylases (N-acyl-D-Amino aci	100.0
TIGR02318	376	phosphono_phnM phosphonate metabolism protein PhnM	100.0
PRK15446	383	phosphonate metabolism protein PhnM; Provisional	100.0
PRK12394	379	putative metallo-dependent hydrolase; Provisional	99.92
PRK10657	388	isoaspartyl dipeptidase; Provisional	99.92
PRK13206	573	ureC urease subunit alpha; Reviewed	99.91
PRK13308	569	ureC urease subunit alpha; Reviewed	99.91
PRK13207	568	ureC urease subunit alpha; Reviewed	99.91
PRK13985	568	ureB urease subunit beta; Provisional	99.91
cd00375	567	Urease_alpha Urease alpha-subunit; Urease is a nic	99.91
PRK07228	445	N-ethylammeline chlorohydrolase; Provisional	99.91
cd01308	387	Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hy	99.91
PRK13309	572	ureC urease subunit alpha; Reviewed	99.9
TIGR01792	567	urease_alph urease, alpha subunit. This model desc	99.89
cd01298	411	ATZ_TRZ_like TRZ/ATZ family contains enzymes from	99.88
PRK15493	435	5-methylthioadenosine/S-adenosylhomocysteine deami	99.87
PRK06687	419	chlorohydrolase; Validated	99.87
cd01293	398	Bact_CD Bacterial cytosine deaminase and related m	99.85
PLN02303	837	urease	99.85
TIGR01975	389	isoAsp_dipep isoaspartyl dipeptidase IadA. The L-i	99.84
PRK09045	443	N-ethylammeline chlorohydrolase; Provisional	99.84
PRK07203	442	putative chlorohydrolase/aminohydrolase; Validated	99.84
PRK14085	382	imidazolonepropionase; Provisional	99.84
TIGR01178	552	ade adenine deaminase. The family described by thi	99.84
PRK05985	391	cytosine deaminase; Provisional	99.83
COG3964	386	Predicted amidohydrolase [General function predict	99.83
PRK09237	380	dihydroorotase; Provisional	99.83
PRK08203	451	hydroxydechloroatrazine ethylaminohydrolase; Revie	99.83
COG3653	579	N-acyl-D-aspartate/D-glutamate deacylase [Secondar	99.83
PRK07583	438	cytosine deaminase-like protein; Validated	99.83
PRK06380	418	metal-dependent hydrolase; Provisional	99.82
TIGR03314	441	Se_ssnA putative selenium metabolism protein SsnA.	99.82
cd01307	338	Met_dep_hydrolase_B Metallo-dependent hydrolases,	99.82
PRK06151	488	N-ethylammeline chlorohydrolase; Provisional	99.82
PRK12393	457	amidohydrolase; Provisional	99.81
PRK08204	449	hypothetical protein; Provisional	99.81
COG0418	344	PyrC Dihydroorotase [Nucleotide transport and meta	99.81
PRK09356	406	imidazolonepropionase; Validated	99.8
PRK08393	424	N-ethylammeline chlorohydrolase; Provisional	99.8
PRK07572	426	cytosine deaminase; Validated	99.8
PRK07213	375	chlorohydrolase; Provisional	99.79
TIGR02967	401	guan_deamin guanine deaminase. This model describe	99.78
cd01299	342	Met_dep_hydrolase_A Metallo-dependent hydrolases,	99.78
PRK06038	430	N-ethylammeline chlorohydrolase; Provisional	99.77
PRK09230	426	cytosine deaminase; Provisional	99.77
TIGR03583	365	EF_0837 probable amidohydrolase EF_0837/AHA_3915.	99.77
PRK09228	433	guanine deaminase; Provisional	99.77
PRK08418	408	chlorohydrolase; Provisional	99.76
cd01303	429	GDEase Guanine deaminase (GDEase). Guanine deamina	99.75
COG0402	421	SsnA Cytosine deaminase and related metal-dependen	99.74
PRK06846	410	putative deaminase; Validated	99.74
cd01296	371	Imidazolone-5PH Imidazolonepropionase/imidazolone-	99.74
PRK10027	588	cryptic adenine deaminase; Provisional	99.73
TIGR01224	377	hutI imidazolonepropionase. This enzyme catalyzes	99.72
cd00854	374	NagA N-acetylglucosamine-6-phosphate deacetylase,	99.72
COG1228	406	HutI Imidazolonepropionase and related amidohydrol	99.71
COG1574	535	Predicted metal-dependent hydrolase with the TIM-b	99.71
KOG2902	344	consensus Dihydroorotase [Nucleotide transport and	99.7
TIGR00221	380	nagA N-acetylglucosamine-6-phosphate deacetylase.	99.68
cd01313	418	Met_dep_hydrolase_E Metallo-dependent hydrolases,	99.68
COG1001	584	AdeC Adenine deaminase [Nucleotide transport and m	99.66
cd01312	381	Met_dep_hydrolase_D Metallo-dependent hydrolases,	99.66
PF13594	68	Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1	99.65
PRK09229	456	N-formimino-L-glutamate deiminase; Validated	99.65
cd01300	479	YtcJ_like YtcJ_like metal dependent amidohydrolase	99.64
TIGR02022	455	hutF formiminoglutamate deiminase. In some species	99.62
PRK11170	382	nagA N-acetylglucosamine-6-phosphate deacetylase;	99.62
COG0804	568	UreC Urea amidohydrolase (urease) alpha subunit [A	99.6
COG3454	377	Metal-dependent hydrolase involved in phosphonate	99.57
cd01304	541	FMDH_A Formylmethanofuran dehydrogenase (FMDH) sub	99.57
TIGR03121	556	one_C_dehyd_A formylmethanofuran dehydrogenase sub	99.57
cd01292	275	metallo-dependent_hydrolases Superfamily of metall	99.49
cd01295	422	AdeC Adenine deaminase (AdeC) directly deaminates	99.47
KOG3968	439	consensus Atrazine chlorohydrolase/guanine deamina	99.41
COG1820	380	NagA N-acetylglucosamine-6-phosphate deacetylase [	99.32
PF13147	304	Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2	99.31
cd01309	359	Met_dep_hydrolase_C Metallo-dependent hydrolases,	99.25
PF12890	142	DHOase: Dihydro-orotase-like; InterPro: IPR024403	99.23
COG1229	575	FwdA Formylmethanofuran dehydrogenase subunit A [E	99.13
cd01305	263	archeal_chlorohydrolases Predicted chlorohydrolase	99.05
cd01306	325	PhnM PhnM is believed to be a subunit of the membr	99.0
PRK06886	329	hypothetical protein; Validated	98.87
PF01979	333	Amidohydro_1: Amidohydrolase family; InterPro: IPR	98.51
cd01310	251	TatD_DNAse TatD like proteins; E.coli TatD is a cy	98.33
KOG3892	407	consensus N-acetyl-glucosamine-6-phosphate deacety	98.06
TIGR00010	252	hydrolase, TatD family. Several genomes have multi	98.02
PRK10812	265	putative DNAse; Provisional	97.98
COG0084	256	TatD Mg-dependent DNase [DNA replication, recombin	97.94
PRK11449	258	putative deoxyribonuclease YjjV; Provisional	97.91
PRK10425	258	DNase TatD; Provisional	97.88
cd00530	293	PTE Phosphotriesterase (PTE) catalyzes the hydroly	97.84
PF01026	255	TatD_DNase: TatD related DNase The Pfam entry find	97.75
cd01311	263	PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC)	97.53
COG1099	254	Predicted metal-dependent hydrolases with the TIM-	97.39
PRK09358	340	adenosine deaminase; Provisional	97.37
PF00449	121	Urease_alpha: Urease alpha-subunit, N-terminal dom	97.34
PF04909	273	Amidohydro_2: Amidohydrolase; InterPro: IPR006992	97.23
cd01320	325	ADA Adenosine deaminase (ADA) is a monomeric zinc	97.2
PRK09875	292	putative hydrolase; Provisional	96.69
TIGR01430	324	aden_deam adenosine deaminase. This family include	96.64
PF02126	308	PTE: Phosphotriesterase family; InterPro: IPR00155	96.23
COG2159	293	Predicted metal-dependent hydrolase of the TIM-bar	95.86
PF07969	404	Amidohydro_3: Amidohydrolase family; InterPro: IPR	95.85
COG1735	316	Php Predicted metal-dependent hydrolase with the T	94.82
PF07969	404	Amidohydro_3: Amidohydrolase family; InterPro: IPR	91.83
COG1831	285	Predicted metal-dependent hydrolase (urease superf	91.41
TIGR01496	257	DHPS dihydropteroate synthase. This model represen	91.37
COG3618	279	Predicted metal-dependent hydrolase of the TIM-bar	90.87
PRK01060	281	endonuclease IV; Provisional	90.29
cd01308	387	Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hy	90.22
PF00962	331	A_deaminase: Adenosine/AMP deaminase immunodeficie	89.99
PRK13352	431	thiamine biosynthesis protein ThiC; Provisional	89.55
smart00518	273	AP2Ec AP endonuclease family 2. These endonuclease	89.52
COG0826	347	Collagenase and related proteases [Posttranslation	89.18
cd00443	305	ADA_AMPD Adenosine/AMP deaminase. Adenosine deamin	86.77
COG5016	472	Pyruvate/oxaloacetate carboxyltransferase [Energy	86.2
PTZ00124	362	adenosine deaminase; Provisional	85.25
cd01321	345	ADGF Adenosine deaminase-related growth factors (A	84.42
COG4464	254	CapC Capsular polysaccharide biosynthesis protein	84.31
PRK14042	596	pyruvate carboxylase subunit B; Provisional	82.68
PRK12330	499	oxaloacetate decarboxylase; Provisional	82.62
PRK12581	468	oxaloacetate decarboxylase; Provisional	82.37
cd00951	289	KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also	81.61
PTZ00372	413	endonuclease 4-like protein; Provisional	80.7

>PLN02795 allantoinase

Probab=100.00  E-value=6.9e-65  Score=505.83  Aligned_cols=395  Identities=70%  Similarity=1.134  Sum_probs=323.1

Q ss_pred             CccchhhHHHHHHHHHHHHHHHHHHh-cccccccccccCCCCCccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCC
Q 015826            1 MENLNLQWRLLPTLTLLAASLFLLVF-KDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDW   79 (399)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~   79 (399)
                      ||+-=.+-|.+||+..+-+.+..|.| +..-.+..+.++..|+.+++|+|++|+++++...++|+|+||+|++|++....
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~vv~~~~~~~~~v~i~dG~I~~I~~~~~~   80 (505)
T PLN02795          1 MESALLQLRILPLLALLATLVFFFLFAPALPLQGRDRCSLLPWPHFVLYSKRVVTPAGVIPGAVEVEGGRIVSVTKEEEA   80 (505)
T ss_pred             CchHhhhhhhHHHHHHHHHHHHHHHhccccccccccccccccccceEEECCEEEECCCeEEEEEEEECCEEEEecCcccc
Confidence            55555666777777666644433333 22222356667788888999999999998877789999999999999875322


Q ss_pred             CCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc
Q 015826           80 PRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK  159 (399)
Q Consensus        80 ~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~  159 (399)
                      +...++.++||++|++|+|||||+|+|++.++...++++...+++++.+||||++||+.++.|...+.+.++..++....
T Consensus        81 ~~~~~~~~~ida~G~~v~PG~ID~H~H~~~~~~~~~e~~~~~~~aa~~gGvTtv~dmp~~~~P~~~~~~~~~~~~~~~~~  160 (505)
T PLN02795         81 PKSQKKPHVLDYGNAVVMPGLIDVHVHLNEPGRTEWEGFPTGTKAAAAGGITTLVDMPLNSFPSTTSVETLELKIEAAKG  160 (505)
T ss_pred             ccccCCCEEEECCCCEEecCEEecccCcCCCCccchhHHHHHHHHHHcCCcEEEECCCCCCCCCCChHHHHHHHHHHhcc
Confidence            11112467999999999999999999999887778899999999999999999999995566777778888888887766


Q ss_pred             cCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchh
Q 015826          160 RIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER  239 (399)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~  239 (399)
                      ...++++++.+.........++++++.+.|+.+||.|+.+++...++..+++.+.++++.++++|+++++|+|+.+.+..
T Consensus       161 ~~~vd~~~~~~~~~~~~~~~~~l~~~~~~G~~g~k~f~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~iH~E~~~l~~~  240 (505)
T PLN02795        161 KLYVDVGFWGGLVPENAHNASVLEELLDAGALGLKSFMCPSGINDFPMTTATHIKAALPVLAKYGRPLLVHAEVVSPVES  240 (505)
T ss_pred             CceeeeeceecccCcchhHHHHHHHHHHCCCcEEEEEecccCCCCcccCCHHHHHHHHHHHHHhCCEEEEecCChhHhhh
Confidence            77888887765544333456778888888999999998765433445678899999999999999999999999886542


Q ss_pred             HHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEc
Q 015826          240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET  319 (399)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~  319 (399)
                      ....   ..+..++..++.+||+.+|..++.+++.++++++..++.+|+++|++|+|++.+++++|+++|++|++|||||
T Consensus       241 ~~~~---~~~~~~~~~~~~~rP~~aE~~ai~~~~~la~~~~~~~~~~g~~lhi~HiSt~~~~~e~i~~ak~~G~~Vt~Ev  317 (505)
T PLN02795        241 DSRL---DADPRSYSTYLKSRPPSWEQEAIRQLLEVAKDTRPGGVAEGAHVHIVHLSDAESSLELIKEAKAKGDSVTVET  317 (505)
T ss_pred             hhhh---hcCCcChhHhcccCCHHHHHHHHHHHHHHHHHhhhcccCCCCCEEEEECCChHHHHHHHHHHHHCCCcEEEEe
Confidence            2110   1223344556789999999999999999999876666666999999999995479999999999999999999


Q ss_pred             cccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          320 CPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       320 ~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      |||||+|+++++..+++++||+||||+++||++||++|++|+||+|+|||+||+.++|..++.+|+++|+|++|+|++|
T Consensus       318 ~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d~~aL~~al~~G~Id~i~sDHap~~~~~K~~~~~~~~~a~~G~~gle~~l  396 (505)
T PLN02795        318 CPHYLAFSAEEIPDGDTRYKCAPPIRDAANRELLWKALLDGDIDMLSSDHSPSPPDLKLLEEGNFLRAWGGISSLQFVL  396 (505)
T ss_pred             ChhhhcccHHHccCCCCceEEcCCCCChHHHHHHHHHHhCCCceEEecCCCCCChHHhccCcCCHhhCCCCceeHHHHH
Confidence            9999999999887778999999999999999999999999999999999999999999766678999999999999875

>COG0044 PyrC Dihydroorotase and related cyclic amidohydrolases [Nucleotide transport and metabolism]

Probab=100.00  E-value=6e-64  Score=483.88  Aligned_cols=330  Identities=36%  Similarity=0.529  Sum_probs=293.1

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHH
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT  122 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~  122 (399)
                      ++++|+|+++++++....+||.|+||+|++|++.....   .+.++||++|++|+||+||.|+|+++||+..+|++.+++
T Consensus         1 ~~~lIk~~~iv~~~~~~~~di~i~~g~I~~Ig~~l~~~---~~~~iiD~~g~~v~PG~ID~HVH~repg~~~ke~~~tgs   77 (430)
T COG0044           1 MDLLIKNARVVDPGEDEVADILIKDGKIAAIGKNLEPT---SGAEIIDAKGLLVLPGLVDLHVHFREPGFEHKETFETGS   77 (430)
T ss_pred             CcEEEeccEEEcCCCceEecEEEECCEEEEeccCCCCC---CCCcEEECCCCEEccCeeEEEEecCCCCcchhhhHHHHH
Confidence            36899999999996667999999999999999864332   367899999999999999999999999999999999999


Q ss_pred             HHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCC
Q 015826          123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGI  202 (399)
Q Consensus       123 ~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~  202 (399)
                      ++|++||||||++|| ++.|...+.+.++.+++.++....+++.++++++..+....+.++...   ..++|.|+.... 
T Consensus        78 ~AAa~GG~Ttv~dmP-nt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~it~~~~~~~~~~~~~~---~~g~~~F~~~~~-  152 (430)
T COG0044          78 RAAAAGGVTTVVDMP-NTKPPIDTAEALEDKLERAKGKSVVDYAFYGGLTKGNLGKLELTERGV---EAGFKGFMDDST-  152 (430)
T ss_pred             HHHHcCCceEEEECC-CCCCCCCCHHHHHHHHHHhhccceeEEEEEEEEeccccchhhhhhhhh---ccceEEEecCCc-
Confidence            999999999999999 888989999999999999988899999999998876543232333222   456677776542 


Q ss_pred             CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccC
Q 015826          203 NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTD  282 (399)
Q Consensus       203 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~  282 (399)
                         +..+.+.+++.++++++.|.++.+|+|+++...+.+++.+    ......++..+|+.+|..++.+.+++++.+   
T Consensus       153 ---~~~~~~~~~~~~~~~~~~~~~~~~H~Ed~~~~~~~~~~~g----~~~~~~~~~~~p~~aE~~~iar~~~la~~~---  222 (430)
T COG0044         153 ---GALDDDVLEEALEYAAELGALILVHAEDDDLIAEGVMNEG----LRAPELGLAGRPPIAEASAIARDLELARAT---  222 (430)
T ss_pred             ---CcCCHHHHHHHHHHHHhcCCeEEEecCChhHhhhHHHhcC----ccchhhccCCCChHHHHHHHHHHHHHHHHh---
Confidence               3578899999999999999999999999987766666554    455667888999999999999999999976   


Q ss_pred             CCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCc
Q 015826          283 GPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHI  362 (399)
Q Consensus       283 ~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i  362 (399)
                          |+++|++|+|++ +++++++.+|..|++||||+|||||+|+++++..+++++|||||||+++||++||+++++|+|
T Consensus       223 ----g~~vhi~HiSt~-~sv~li~~ak~~g~~vt~EvtphHL~l~~~~~~~~~~~~k~nPPLR~~~dr~aL~~~l~~G~I  297 (430)
T COG0044         223 ----GARVHICHISTK-ESVELIRAAKAEGIRVTAEVTPHHLLLDEEDIEDLGTLAKVNPPLRDEEDREALWEALKDGVI  297 (430)
T ss_pred             ----CCcEEEEEcCCH-HHHHHHHHHhhcCCceEEeecchheEccHhHhhccCcceEECCCCCCHHHHHHHHHHHhCCCC
Confidence                899999999999 999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             cEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          363 DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       363 d~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      |+|+|||+||+.++|..   +|+.+|+|++|+|+.|
T Consensus       298 D~iasDHaPht~eeK~~---~f~~ap~G~~glE~~l  330 (430)
T COG0044         298 DVIASDHAPHTLEEKRL---PFEEAPSGIPGLETAL  330 (430)
T ss_pred             cEEEcCCCCCCHHHhcc---chhhCCCCCccHHHHH
Confidence            99999999999999964   4999999999999975

>PRK07369 dihydroorotase; Provisional

Probab=100.00  E-value=5.9e-63  Score=481.48  Aligned_cols=331  Identities=27%  Similarity=0.371  Sum_probs=288.5

Q ss_pred             CccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchH
Q 015826           42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP  119 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~  119 (399)
                      |.+++|+|++|+++.+  ...++|+|+||+|++|++.....  ..+.++||++|++|+|||||+|+|++.++...++++.
T Consensus         1 ~~~~~i~n~~v~d~~~~~~~~~~v~I~dg~I~~i~~~~~~~--~~~~~~iDa~G~~vlPG~ID~H~H~~~~~~~~~e~~~   78 (418)
T PRK07369          1 MSNELLQQVRVLDPVSNTDRIADVLIEDGKIQAIEPHIDPI--PPDTQIIDASGLILGPGLVDLYSHSGEPGFEERETLA   78 (418)
T ss_pred             CCCEEEeCeEEECCCCCcccceeEEEECCEEEEecCCcccC--CCCCEEEECCCCEEecCEEecccccCCCCcCCCccHH
Confidence            4588999999998654  35789999999999998653211  1256899999999999999999999999888889999


Q ss_pred             HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCC-hhhHHHHHHHHHcCCcEEEEeec
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNASALEALLNAGVLGLKSFMC  198 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~G~~~ik~~~~  198 (399)
                      +++++|+++||||+++|| ++.|...+.+.+..+++.+...+.+||.+++.+.... ....+++.++.+.|+.+||.+  
T Consensus        79 s~~~aa~~GGvTtv~~~p-n~~P~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~ei~~l~~~Gv~~f~~~--  155 (418)
T PRK07369         79 SLAAAAAAGGFTRVAILP-DTFPPLDNPATLARLQQQAQQIPPVQLHFWGALTLGGQGKQLTELAELAAAGVVGFTDG--  155 (418)
T ss_pred             HHHHHHHhCCceEEEECC-CCCCCCCCHHHHHHHHHHhcccCceeEEEEEEEeeCCCCccHhhHHHHHHCCCEEEECC--
Confidence            999999999999999999 7788888899999888888777889999998876543 245778888888899888731  


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhh
Q 015826          199 PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD  278 (399)
Q Consensus       199 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~  278 (399)
                            .+..+.+.+.++++.++++|.++.+|+|+.+.+.++.++.    +..+...|+.+||+.+|..++.+++.+++.
T Consensus       156 ------~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~~~~~----g~~~~~~~~~~~p~~aE~~av~r~~~la~~  225 (418)
T PRK07369        156 ------QPLENLALLRRLLEYLKPLGKPVALWPCDRSLAGNGVMRE----GLLALRLGLPGDPASAETTALAALLELVAA  225 (418)
T ss_pred             ------CcCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhcCcccC----ChhHHHhCCCCCCHHHHHHHHHHHHHHHHH
Confidence                  2235677899999999999999999999999865554433    344566778899999999999999999998


Q ss_pred             hccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHh
Q 015826          279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM  358 (399)
Q Consensus       279 ~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~  358 (399)
                      +       |+++||+|+|++ +++++|+++|++|++||||||||||+|+++++..+++.+||+||||+++||++||++|+
T Consensus       226 ~-------~~~~hi~HvSs~-~~~~~i~~ak~~g~~vt~Ev~phhL~l~~~~~~~~~~~~kv~PPLR~~~d~~aL~~~l~  297 (418)
T PRK07369        226 I-------GTPVHLMRISTA-RSVELIAQAKARGLPITASTTWMHLLLDTEALASYDPNLRLDPPLGNPSDRQALIEGVR  297 (418)
T ss_pred             H-------CCcEEEEeCCCH-HHHHHHHHHHHcCCCeEEEecHHHHhccHHHHhccCCCcEECCCCCCHHHHHHHHHHHh
Confidence            6       999999999999 99999999999999999999999999999988777889999999999999999999999


Q ss_pred             cCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       359 ~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +|+||+|+|||+||+.++|..   +|+++|+|++|+|+.|
T Consensus       298 ~G~Id~i~SDHaP~~~~~K~~---~~~~~~~G~~G~e~~l  334 (418)
T PRK07369        298 TGVIDAIAIDHAPYTYEEKTV---AFAEAPPGAIGLELAL  334 (418)
T ss_pred             cCCCCEEEcCCCCCCHHHccC---CHhHCCCCceeHHHHH
Confidence            999999999999999999863   7999999999999865

>PRK07627 dihydroorotase; Provisional

Probab=100.00  E-value=4.9e-61  Score=469.38  Aligned_cols=330  Identities=23%  Similarity=0.317  Sum_probs=277.8

Q ss_pred             ccEEEEccEEEcCCCc--eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHH
Q 015826           43 NQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS  120 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~  120 (399)
                      |+++|+|++|+++.+.  .+++|+|+||||++|++.....   .+.++||++|++|+|||||+|+|+++++...++++.+
T Consensus         1 m~~~i~~~~v~~~~~~~~~~~~I~I~~g~I~~i~~~~~~~---~~~~~iDa~g~~vlPG~iD~H~H~~~~g~~~~e~~~t   77 (425)
T PRK07627          1 MKIHIKGGRLIDPAAGTDRQADLYVAAGKIAAIGQAPAGF---NADKTIDASGLIVCPGLVDLSARLREPGYEYKATLES   77 (425)
T ss_pred             CeEEEEeeEEECCCCCccceeEEEEECCEEEEecCCCcCC---CCCeEEECCCCEEeccEEeccccccCCCccccCcHHH
Confidence            3689999999987653  5789999999999998743211   3568999999999999999999999988888899999


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC-ChhhHHHHHHHHHcCCcEEEEeecC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCP  199 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik~~~~~  199 (399)
                      .+++++.+||||+++|| ++.|.....+.++...........+++..++.+..+ ..+..++++++.+.|+.+||.+   
T Consensus        78 ~s~aa~~gGvTtv~~~p-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~~l~~~G~~~fk~~---  153 (425)
T PRK07627         78 EMAAAVAGGVTSLVCPP-DTDPVLDEPGLVEMLKFRARNLNQAHVYPLGALTVGLKGEVLTEMVELTEAGCVGFSQA---  153 (425)
T ss_pred             HHHHHHhCCeeEEEeCC-CCCCCCCCHHHHHHHHHHhhccCceeEEEeCeEEcCCCccCHHHHHHHHhCCEEEEEcC---
Confidence            99999999999999999 677766666666655555444445565555544332 3445788889988999999863   


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhh
Q 015826          200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDT  279 (399)
Q Consensus       200 ~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~  279 (399)
                          ..+..++..+.++++.++++|.++.+|+|+......+...    .+..+...++.+||+.+|..++.+++.+|+++
T Consensus       154 ----~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~~~~~~~~~----~g~~~~~~~~~~~P~~aE~~av~r~~~la~~~  225 (425)
T PRK07627        154 ----NVPVVDTQVLLRALQYASTFGFTVWLRPLDAFLGRGGVAA----SGAVASRLGLSGVPVAAETIALHTIFELMRVT  225 (425)
T ss_pred             ----CcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhhCCCcC----CCHhHHHcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence                1234678899999999999999999999998765433332    23345567788999999999999999999986


Q ss_pred             ccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhc
Q 015826          280 RTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMD  359 (399)
Q Consensus       280 ~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~  359 (399)
                             |+|+||+|+|++ +++++|+++|++|++||||||||||+|+++++..+++.+||+||||++++|++||+++++
T Consensus       226 -------~~~~hi~HvSs~-~~~~~i~~ak~~g~~vt~Ev~ph~L~l~~~~~~~~~~~~k~~PPLR~~~d~~~L~~~l~~  297 (425)
T PRK07627        226 -------GARVHLARLSSA-AGVALVRAAKAEGLPVTCDVGVNHVHLIDVDIGYFDSQFRLDPPLRSQRDREAIRAALAD  297 (425)
T ss_pred             -------CCcEEEEeCCCH-HHHHHHHHHHHCCCCeEEEeccchheEeHhHHhccCCceEEeCCCCCHHHHHHHHHHHhc
Confidence                   899999999999 999999999999999999999999999999887778899999999999999999999999


Q ss_pred             CCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          360 GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       360 G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      |+||+|+|||+||+.++|.   .+|+.+++|++|+|+++
T Consensus       298 G~id~i~SDHaP~~~~~k~---~~~~~~~~G~~g~e~~~  333 (425)
T PRK07627        298 GTIDAICSDHTPVDDDEKL---LPFAEATPGATGLELLL  333 (425)
T ss_pred             CCCcEEEcCCCCCCHHHcc---CCHhhCCCCceeHHHHH
Confidence            9999999999999988885   37999999999999854

>PRK09059 dihydroorotase; Validated

Probab=100.00  E-value=4.2e-60  Score=463.33  Aligned_cols=334  Identities=23%  Similarity=0.310  Sum_probs=284.0

Q ss_pred             CccEEEEccEEEcCCCc--eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchH
Q 015826           42 YNQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP  119 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~  119 (399)
                      +.+++|+|++|+++++.  .+++|+|+||||++|++.......+.+.++||++|++|+|||||+|+|++.++..+.+++.
T Consensus         2 ~~~~~i~n~~v~~~~~~~~~~~~v~I~~G~I~~i~~~~~~~~~~~~~~viDa~G~~v~PG~ID~HvH~~~~~~~~~e~~~   81 (429)
T PRK09059          2 MRPILLANARIIDPSRGLDEIGTVLIEDGVIVAAGKGAGNQGAPEGAEIVDCAGKAVAPGLVDARVFVGEPGAEHRETIA   81 (429)
T ss_pred             CcCEEEEeeEEECCCCCcccceEEEEECCEEEEecCccccccCCCCCeEEECCCCEEeccEEecccccCCCCchhhhhHH
Confidence            46789999999998774  3789999999999998643211001245799999999999999999999887777788899


Q ss_pred             HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC-ChhhHHHHHHHHHcCCcEEEEeec
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMC  198 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik~~~~  198 (399)
                      ..+++++++||||+++|| ++.|...+.+.++.+++.+.....+++.+++.+..+ ..+..+++.++.+.|+.+|+..  
T Consensus        82 ~~s~aa~~gGvTtv~~~p-~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~~~Gv~~f~~~--  158 (429)
T PRK09059         82 SASRAAAAGGVTSIIMMP-DTDPVIDDVALVEFVKRTARDTAIVNIHPAAAITKGLAGEEMTEFGLLRAAGAVAFTDG--  158 (429)
T ss_pred             HHHHHHHhCCcEEEEecc-CCCCCCCCHHHHHHHHHHhcccCcccEEEEeEEecCCCCcchHHHHHHHhcCcEEEecC--
Confidence            999999999999999999 677777788888888887776677899988877654 3455778888888898877632  


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhh
Q 015826          199 PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD  278 (399)
Q Consensus       199 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~  278 (399)
                           ..+..+...+.+++++++++|+++.+|+|+.+.+....+..    +..+...++.+||..+|..++.+++.++++
T Consensus       159 -----~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~----~~~~~~~~~~~rP~~aE~~av~r~~~la~~  229 (429)
T PRK09059        159 -----RRSVANTQVMRRALTYARDFDAVIVHETRDPDLGGNGVMNE----GLFASWLGLSGIPREAEVIPLERDLRLAAL  229 (429)
T ss_pred             -----CcccCCHHHHHHHHHHHHhcCCEEEEecCChhhhcCCCcCC----cHHHHHcCCCCCCHHHHHHHHHHHHHHHHH
Confidence                 12345677799999999999999999999998765433332    233445677899999999999999999997


Q ss_pred             hccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHh
Q 015826          279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM  358 (399)
Q Consensus       279 ~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~  358 (399)
                      +       |+++||+|+|++ +++++|+++|++|++||||||||||+|+++++..+++++||+||||+++||++||++|+
T Consensus       230 ~-------~~~~hi~hvs~~-~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~~~~~~kvnPPLR~~~d~~~L~~~l~  301 (429)
T PRK09059        230 T-------RGRYHAAQISCA-ESAEALRRAKDRGLKVTAGVSINHLSLNENDIGEYRTFFKLSPPLRTEDDRVAMVEAVA  301 (429)
T ss_pred             H-------CCcEEEEecCCH-HHHHHHHHHHHCCCCEEEeecHHHHhccHHHHhccCCccEEcCCCCCHHHHHHHHHHHH
Confidence            6       999999999999 99999999999999999999999999999988777889999999999999999999999


Q ss_pred             cCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       359 ~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +|.||+|+|||+||+.++|..   +|+++|+|++|+|+++
T Consensus       302 ~g~id~i~sDh~p~~~~~K~~---~~~~~~~G~~gle~~l  338 (429)
T PRK09059        302 SGTIDIIVSSHDPQDVDTKRL---PFSEAAAGAIGLETLL  338 (429)
T ss_pred             cCCCcEEEeCCCCCCHHHCcC---ChhhCCCCcccHHHHH
Confidence            999999999999999998863   7999999999999874

>PRK08417 dihydroorotase; Provisional

Probab=100.00  E-value=2.8e-59  Score=453.01  Aligned_cols=300  Identities=23%  Similarity=0.273  Sum_probs=258.3

Q ss_pred             EEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCC
Q 015826           63 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDP  142 (399)
Q Consensus        63 V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~  142 (399)
                      |+|+||||++|++..      .+.++||++|++|+|||||+|+|++.++.. ++++.+++++|+++||||+++|| ++.|
T Consensus         1 i~I~dG~I~~i~~~~------~~~~viDa~g~~vlPG~ID~HvH~~~~~~~-~e~~~t~s~aA~aGGvTtv~dmp-nt~P   72 (386)
T PRK08417          1 IRIKDGKITEIGSDL------KGEEILDAKGKTLLPALVDLNVSLKNDSLS-SKNLKSLENECLKGGVGSIVLYP-DSTP   72 (386)
T ss_pred             CEEECCEEEEecCCC------CCCeEEECCCCEEccCeeEEeeeeCCCCcC-hhhHHHHHHHHHcCCcEEEEeCC-CCCC
Confidence            679999999998643      256899999999999999999999987765 58999999999999999999999 7778


Q ss_pred             CCCcHHHHHHHHHHHhc--cCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHH
Q 015826          143 STISTETLKLKVDAAEK--RIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVL  220 (399)
Q Consensus       143 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a  220 (399)
                      ...+.+.++...+....  ..++++.   ... ...+..+++.++.+.|+.+||.+.         ..+++.+.++++++
T Consensus        73 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~i~~l~~~Gv~~~k~~~---------~~~~~~l~~~~~~a  139 (386)
T PRK08417         73 AIDNEIALELINSAQRELPMQIFPSI---RAL-DEDGKLSNIATLLKKGAKALELSS---------DLDANLLKVIAQYA  139 (386)
T ss_pred             CCCCHHHHHHHHHHhhccCCcEEEEE---EEE-CCCccHHHHHHHHHCCCEEEECCC---------CCCHHHHHHHHHHH
Confidence            88888888777665544  3344442   233 233457888888889999887531         35788999999999


Q ss_pred             HhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhH
Q 015826          221 ARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASS  300 (399)
Q Consensus       221 ~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~  300 (399)
                      +++|+++.+|+|+.+.+....++.    +..++..++.+||..+|..++.+++.+++++       |+++||+|+|++ +
T Consensus       140 ~~~g~~V~~HaEd~~~~~~~~~~~----g~~~~~~~~~~rp~~aE~~~v~~~~~la~~~-------~~~lhi~hvS~~-~  207 (386)
T PRK08417        140 KMLDVPIFCRCEDSSFDDSGVMND----GELSFELGLPGIPSIAETKEVAKMKELAKFY-------KNKVLFDTLALP-R  207 (386)
T ss_pred             HHcCCEEEEeCCCHHHhhHHHHhc----ChhhHHhCCCCCCHHHHHHHHHHHHHHHHHh-------CCCEEEEeCCCH-H
Confidence            999999999999988876555543    3445667788999999999999999999986       899999999999 9


Q ss_pred             HHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCC
Q 015826          301 SLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLD  380 (399)
Q Consensus       301 ~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~  380 (399)
                      ++++|+++|++|++||||||||||+|+++++..+++.+||+||||+++||++||++|++|+||+|+|||+||+.++|.. 
T Consensus       208 ~~~~i~~ak~~g~~vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlR~~~d~~~L~~~l~~g~Id~i~SDHaP~~~~~K~~-  286 (386)
T PRK08417        208 SLELLDKFKSEGEKLLKEVSIHHLILDDSACENFNTAAKLNPPLRSKEDRLALLEALKEGKIDFLTSLHSAKSNSKKDL-  286 (386)
T ss_pred             HHHHHHHHHHCCCCEEEEechHHHeeCHHHhcCcCcccEECCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccC-
Confidence            9999999999999999999999999999888777889999999999999999999999999999999999999988863 


Q ss_pred             cCCcccccCCcchhcccc
Q 015826          381 EGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       381 ~~~~~~~~~G~~g~e~~l  398 (399)
                        +|+++|+|++|+|+++
T Consensus       287 --~~~~a~~G~~g~e~~~  302 (386)
T PRK08417        287 --AFDEAAFGIDSICEYF  302 (386)
T ss_pred             --CHhHCCCCchHHHHHH
Confidence              6999999999999875

>PRK13404 dihydropyrimidinase; Provisional

Probab=100.00  E-value=2.8e-58  Score=456.71  Aligned_cols=335  Identities=25%  Similarity=0.355  Sum_probs=281.7

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC---CCCCcCch
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRTEWEGF  118 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~~~~e~~  118 (399)
                      +++++|+|++|+++++..+++|+|+||+|++|++..  +   .+.++||++|++|+|||||+|+|+.++   +....+++
T Consensus         3 ~~d~~i~~~~v~~~~~~~~~~i~I~dg~I~~i~~~~--~---~~~~~iD~~G~~v~PG~ID~H~H~~~~~~~~~~~~e~~   77 (477)
T PRK13404          3 AFDLVIRGGTVVTATDTFQADIGIRGGRIAALGEGL--G---PGAREIDATGRLVLPGGVDSHCHIDQPSGDGIMMADDF   77 (477)
T ss_pred             CCcEEEECCEEEcCCCceEEEEEEECCEEEEecCCC--C---CCCeEEECCCCEEecCEEEeEEcCCccccCCccccchH
Confidence            357899999999987766899999999999998642  1   255799999999999999999999875   34567889


Q ss_pred             HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhH-HHHHHHHHcCCcEEEEee
Q 015826          119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNA-SALEALLNAGVLGLKSFM  197 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~l~~~G~~~ik~~~  197 (399)
                      .+.+++++.+||||+++++ ++.+.....+.++.........+.++++++........+.. ++++++.+.|+.+||+|+
T Consensus        78 ~~~s~aa~~gGvTtv~~~~-~~~~~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~~~~v~~l~~~G~~~iKi~~  156 (477)
T PRK13404         78 YTGTVSAAFGGTTTVIPFA-AQHRGQSLREAVEDYHRRAAGKAVIDYAFHLIVADPTEEVLTEELPALIAQGYTSFKVFM  156 (477)
T ss_pred             HHHHHHHHcCCccEEEEcc-CCCCCCCHHHHHHHHHHHhccCcEEEEEEEEEecCCChhhHHHHHHHHHHcCCCEEEEEe
Confidence            9999999999999999998 45555666777777776766777889988876654433333 678899999999999997


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchh---HHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHH
Q 015826          198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER---HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLT  274 (399)
Q Consensus       198 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~  274 (399)
                      .+.+    +..+++++.+++++|+++|++|.+|+++.+.+..   ..++.    +......++..||..+|..++.+++.
T Consensus       157 ~~~~----~~~~~~~l~~~~~~a~~~g~~V~~Hae~~~~i~~~~~~~~~~----G~~~~~~~~~~rp~~~E~~~v~~~~~  228 (477)
T PRK13404        157 TYDD----LKLDDRQILDVLAVARRHGAMVMVHAENHDMIAWLTKRLLAA----GLTAPKYHAISRPMLAEREATHRAIA  228 (477)
T ss_pred             cCCC----CCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHC----CCcchhhccccCCHHHHHHHHHHHHH
Confidence            5431    3568899999999999999999999999887542   22322    23344567789999999999999999


Q ss_pred             HHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC---CCcceEEcCCCCChhhHH
Q 015826          275 VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKE  351 (399)
Q Consensus       275 ~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~---~~~~~~~~Pplr~~~~~~  351 (399)
                      +++++       |+|+|++|+|++ +++++|+.+|++|+.+|||||||||+++++++..   .|+.+||+||||++++|+
T Consensus       229 la~~~-------g~~~hi~Hvs~~-~~~~~i~~~k~~g~~vt~e~~ph~L~l~~~~~~~~~~~g~~~k~~Pplr~~~d~~  300 (477)
T PRK13404        229 LAELV-------DVPILIVHVSGR-EAAEQIRRARGRGLKIFAETCPQYLFLTAEDLDRPGMEGAKYICSPPPRDKANQE  300 (477)
T ss_pred             HHHHh-------CCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEEChhhhccCHHHhcCccccCCceEECCCCCChHHHH
Confidence            99986       999999999999 9999999999999999999999999999998765   688999999999999999


Q ss_pred             HHHHHHhcCCccEEeCCCCCCCccccc----CC-cCCcccccCCcchhcccc
Q 015826          352 KLWEALMDGHIDMLSSDHSPTVPELKL----LD-EGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       352 ~l~~~l~~G~id~i~sdh~p~~~~~k~----~~-~~~~~~~~~G~~g~e~~l  398 (399)
                      +||++|++|+||+|+|||+||+.++|.    .+ +.+|+++|+|++|+|+.+
T Consensus       301 aL~~~l~~G~id~i~sDHap~~~~eK~~~~~~~~~~~~~~~~~G~~gie~~l  352 (477)
T PRK13404        301 AIWNGLADGTFEVFSSDHAPFRFDDTDGKLAAGANPSFKAIANGIPGIETRL  352 (477)
T ss_pred             HHHHHHhCCCceEEecCCCCCCcccchhhhhccCCCCHhhCCCCcccHHHHH
Confidence            999999999999999999999987761    11 237999999999999864

>PRK06189 allantoinase; Provisional

Probab=100.00  E-value=2.7e-57  Score=448.35  Aligned_cols=336  Identities=41%  Similarity=0.718  Sum_probs=288.8

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHH
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG  121 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~  121 (399)
                      +++++|+|++|+++++..+++|+|+||+|++|++....    ++.++||++|++|+|||||+|+|+..++...++++.+.
T Consensus         2 ~~~~~i~~~~v~~~~~~~~~~v~i~~G~I~~i~~~~~~----~~~~~iD~~g~~vlPG~ID~H~H~~~~~~~~~~~~~~~   77 (451)
T PRK06189          2 MYDLIIRGGKVVTPEGVYRADIGIKNGKIAEIAPEISS----PAREIIDADGLYVFPGMIDVHVHFNEPGRTHWEGFATG   77 (451)
T ss_pred             CccEEEECCEEEcCCCcEEEEEEEECCEEEEecCCCCC----CCCeEEECCCCEEecCEEEeeeccCCCCCCCcccHHHH
Confidence            46899999999998887789999999999999875321    24679999999999999999999998877778899999


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCC
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG  201 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~  201 (399)
                      ++.++++||||+++|+.++.|...+.+.+....+.+...+.+|+.++.+....   ..+++.++.+.|+.+||.|+...+
T Consensus        78 ~~aa~~gGvTt~~~~p~~t~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~~l~~l~~~Gv~~~k~f~~~~~  154 (451)
T PRK06189         78 SAALAAGGCTTYFDMPLNSIPPTVTREALDAKAELARQKSAVDFALWGGLVPG---NLEHLRELAEAGVIGFKAFMSNSG  154 (451)
T ss_pred             HHHHHhCCEEEEEECCCCCCCCCCcHHHHHHHHHHhCcCceEeEEEEeccccc---CHHHHHHHHHcCCcEEEEEccccC
Confidence            99999999999999986666777778888888888877788999987654433   356788888899999999986543


Q ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhH---HhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhh
Q 015826          202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH---VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD  278 (399)
Q Consensus       202 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~  278 (399)
                      ..+.+..++..+.++++.++++|.++.+|+|+++.+...   ++..    +..+...|+.++|+.+|..++.+++.++++
T Consensus       155 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~H~e~~~~~~~~~~~~~~~----g~~~~~~~~~~~P~~~E~~~v~~~l~la~~  230 (451)
T PRK06189        155 TDEFRSSDDLTLYEGMKEIAALGKILALHAESDALTRHLTTQARQQ----GKTDVRDYLESRPVVAELEAVQRALLYAQE  230 (451)
T ss_pred             CCCcCcCCHHHHHHHHHHHHhcCCeEEEECCChHHHHHHHHHHHhc----CCCChhHccccCCHHHHHHHHHHHHHHHHH
Confidence            233445678899999999999999999999998865422   2322    233455678899999999999999999998


Q ss_pred             hccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHh
Q 015826          279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALM  358 (399)
Q Consensus       279 ~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~  358 (399)
                      +       |+++|++|+|+. +++++|+++|++|.++|||||||||+++++++...++.+||+||||++++|++||++++
T Consensus       231 ~-------g~~~hi~HiSt~-~~~~~i~~~k~~g~~vt~ev~ph~L~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~  302 (451)
T PRK06189        231 T-------GCPLHFVHISSG-KAVALIAEAKKRGVDVSVETCPHYLLFTEEDFERIGAVAKCAPPLRSRSQKEELWRGLL  302 (451)
T ss_pred             h-------CCCEEEEECCCH-HHHHHHHHHHHCCCcEEEEeCHHHhhcCHhHhhCcCCceEEeCCCCChhhHHHHHHHHh
Confidence            6       899999999999 99999999999999999999999999999988767889999999999999999999999


Q ss_pred             cCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       359 ~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +|+||+|+|||+||+.++|..  .+|+++|+|++|+|+++
T Consensus       303 ~G~i~~i~sDh~p~~~~~K~~--~~~~~~~~G~~g~e~~l  340 (451)
T PRK06189        303 AGEIDMISSDHSPCPPELKEG--DDFFLVWGGISGGQSTL  340 (451)
T ss_pred             CCCceEEECCCCCCCHHHcCc--CCcccCCCCceeHHHHH
Confidence            999999999999999888852  47999999999999865

>PRK08044 allantoinase; Provisional

Probab=100.00  E-value=2.8e-56  Score=439.53  Aligned_cols=337  Identities=36%  Similarity=0.643  Sum_probs=288.0

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHH
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG  121 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~  121 (399)
                      +++++|+|++|+++++...++|+|+||+|++|++...     .+.++||++|++|+|||||+|+|+..++...++++.+.
T Consensus         2 ~~~~~i~n~~vi~~~~~~~~~i~I~dg~I~~i~~~~~-----~~~~~iD~~G~~v~Pg~iD~h~h~~~~~~~~~e~~~~~   76 (449)
T PRK08044          2 SFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLG-----DAKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYETG   76 (449)
T ss_pred             CceEEEECcEEEcCCCCEEEEEEEECCEEEEecCCCC-----CCCeEEECCCCEEcCCeeccccccCCCCccccccHHHH
Confidence            3588999999998777677999999999999986432     24579999999999999999999998887778899999


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCC
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG  201 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~  201 (399)
                      ++.++++||||++||+.++.|...+.+.++.+.+.++..+.+|+.+++++...   ...++.++.+.|+.+||+|+.+.+
T Consensus        77 ~~aa~~gGvTtv~d~~~~~~p~~~~~~~~~~~~~~~~~~s~vd~~~~~~~~~~---~~~ei~~l~~~gv~~fk~~~~~~~  153 (449)
T PRK08044         77 TRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSY---NLDRLHELDEVGVVGFKCFVATCG  153 (449)
T ss_pred             HHHHHhCCceEEECCccCCCCCCCcHHHHHHHHHHhccCCeeeEEEEeeeCCC---CHHHHHHHHHcCceEEEEEecccC
Confidence            99999999999999996677888889999988888877888999888776543   467788888899999999976532


Q ss_pred             C----CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHh
Q 015826          202 I----NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK  277 (399)
Q Consensus       202 ~----~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~  277 (399)
                      .    .+....++..+.++++.++++|.++.+|+|+.+.+........ ..+......++.+||..+|..++.+++.+++
T Consensus       154 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~H~E~~~l~~~~~~~~~-~~G~~~~~~~~~~~P~~~E~~~v~r~~~lA~  232 (449)
T PRK08044        154 DRGIDNDFRDVNDWQFYKGAQKLGELGQPVLVHCENALICDELGEEAK-REGRVTAHDYVASRPVFTEVEAIRRVLYLAK  232 (449)
T ss_pred             cccccCCccCcCHHHHHHHHHHHHhcCCEEEEecCCHHHHHHHHHHHH-hcCCCChhhccccCCHHHHHHHHHHHHHHHH
Confidence            1    1123357778999999999999999999999987553221100 1223355567789999999999999999999


Q ss_pred             hhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHH
Q 015826          278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEAL  357 (399)
Q Consensus       278 ~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l  357 (399)
                      ++       |+++|++|+|+. +++++++++|++|.++|||+|||||+++++++...|+.+|++||||++++|++||++|
T Consensus       233 ~~-------g~~vhi~HiSt~-~~~~~i~~ak~~G~~it~e~~~h~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l  304 (449)
T PRK08044        233 VA-------GCRLHVCHISSP-EGVEEVTRARQEGQDVTCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGMWEKL  304 (449)
T ss_pred             Hh-------CCCEEEEeCCCH-HHHHHHHHHHHCCCCEEEEcChhhhcccHHHhhCCCCcEEEcCCCCChHHHHHHHHHH
Confidence            86       899999999999 8999999999999999999999999999998877788999999999999999999999


Q ss_pred             hcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          358 MDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       358 ~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      ++|+||+|+|||+||+.++|.   .+|+++|+|++|+|+.|
T Consensus       305 ~~G~id~i~sDH~P~~~~~K~---~~~~~~~~g~~g~e~~l  342 (449)
T PRK08044        305 FNGEIDCLVSDHSPCPPEMKA---GNIMEAWGGIAGLQNCM  342 (449)
T ss_pred             hCCCceEEEcCCCCCChHHcc---CChhhCCCCceEHHHHH
Confidence            999999999999999988886   47999999999999865

>TIGR03178 allantoinase allantoinase

Probab=100.00  E-value=6.4e-56  Score=438.17  Aligned_cols=334  Identities=49%  Similarity=0.829  Sum_probs=287.6

Q ss_pred             cEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHH
Q 015826           44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTK  123 (399)
Q Consensus        44 ~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~  123 (399)
                      |++|+|++|+++++..+++|.|+||+|++|++... +   .+.++||++|++|+|||||+|+|+..++...++++.+.++
T Consensus         1 dl~i~~~~v~~~~~~~~~~v~i~dg~I~~i~~~~~-~---~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~   76 (443)
T TIGR03178         1 DLIIRGGRVILPNGEREADVGVKGGKIAAIGPDIL-G---PAAKIIDAGGLVVFPGVVDTHVHINEPGRTEWEGFETGTR   76 (443)
T ss_pred             CEEEECcEEECCCCceEEEEEEECCEEEEeeCCCC-C---CCCeEEECCCCEEeccEeccccccCCCCccccchHHHHHH
Confidence            57899999999888778999999999999987532 1   2568999999999999999999999887777889999999


Q ss_pred             HHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCC
Q 015826          124 AAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN  203 (399)
Q Consensus       124 ~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~  203 (399)
                      +++++||||++||++++.|...+.+.+...++.......++++++++...   +..+++.++.+.|+.+||+|+.+.+..
T Consensus        77 ~~~~gGvTtv~dmp~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---~~~~~i~~~~~~G~~~ik~~~~~~~~~  153 (443)
T TIGR03178        77 AAAAGGITTYIDMPLNSIPATTTRASLEAKFEAAKGKLAVDVGFWGGLVP---YNLDDLRELDEAGVVGFKAFLSPSGDD  153 (443)
T ss_pred             HHHcCCeEEEEECCCCCCCCCCcHHHHHHHHHHhccCCceeEEEEeccCC---CCHHHHHHHHHCCCcEEEEEecccCCC
Confidence            99999999999998656677777888888888877677889988765443   346678888889999999998764433


Q ss_pred             CCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhH---HhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhc
Q 015826          204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH---VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR  280 (399)
Q Consensus       204 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~  280 (399)
                      .++..+++++.++++.++++|+++++|+|+.+.....   .+..    +..++..++..||..+|..++.+++++++++ 
T Consensus       154 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~~~----g~~~~~~~~~~~p~~ae~~~~~~~~~la~~~-  228 (443)
T TIGR03178       154 EFPHVDDWQLYKGMRELARLGQLLLVHAENPAITSALGEEAPPQ----GGVGADAYLASRPVFAEVEAIRRTLALAKVT-  228 (443)
T ss_pred             CcccCCHHHHHHHHHHHHhcCCeEEEeccChHHHHHHHHHHHhc----CCCChhHhcCcCCHHHHHHHHHHHHHHHHHh-
Confidence            3456788999999999999999999999998765533   3322    3345556778999999999999999999986 


Q ss_pred             cCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcC
Q 015826          281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG  360 (399)
Q Consensus       281 ~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G  360 (399)
                            |+++|++|+|+. +++++++++|++|+++++|+|||||.++++++...++.++++||||+++++++||+++++|
T Consensus       229 ------g~~vhi~Hiss~-~~~~~i~~~~~~g~~it~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G  301 (443)
T TIGR03178       229 ------GCRVHVVHLSSA-EAVELITEAKQEGLDVTVETCPHYLTLTAEEVPDGGTLAKCAPPIRDLANQEGLWEALLNG  301 (443)
T ss_pred             ------CCCEEEEeCCCH-HHHHHHHHHHHCCCcEEEEECccceEecHHHhhCcCcceEEcCCCCChHHHHHHHHHHHcC
Confidence                  899999999998 8999999999999999999999999999988877788999999999999999999999999


Q ss_pred             CccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       361 ~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      ++|+|+|||+||+.++|.  ..+|+.+|+|++|+|+.+
T Consensus       302 ~i~~i~SDh~p~~~~~K~--~~~~~~~~~G~~g~e~~l  337 (443)
T TIGR03178       302 LIDCVVSDHSPCTPDLKR--AGDFFKAWGGIAGLQSTL  337 (443)
T ss_pred             CccEEeCCCCCCChHHcC--cCChhhCCCCeeEHHHhH
Confidence            999999999999988884  258999999999999864

This enzyme carries out the first step in the degradation of allantoin, a ring-opening hydrolysis. The seed members of this model are all in the vicinity of other genes involved in the processes of xanthine/urate/allantoin catabolism. Although not included in the seed, many eukaryotic homologs of this family are included above the trusted cutoff. Below the noise cutoff are related hydantoinases.

>cd01315 L-HYD_ALN L-Hydantoinases (L-HYDs) and Allantoinase (ALN); L-Hydantoinases are a member of the dihydropyrimidinase family, which catalyzes the reversible hydrolytic ring opening of dihydropyrimidines and hydantoins (five-membered cyclic diamides used in biotechnology)

Probab=100.00  E-value=2.8e-55  Score=435.10  Aligned_cols=340  Identities=53%  Similarity=0.914  Sum_probs=290.4

Q ss_pred             cEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHH
Q 015826           44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTK  123 (399)
Q Consensus        44 ~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~  123 (399)
                      |++|+|++|+++++..+++|+|+||||++|++.....   .+.++||++|++|+|||||+|+|+..++...++++.+.++
T Consensus         1 dl~i~~~~v~~~~~~~~~~v~I~~g~I~~i~~~~~~~---~~~~~iDa~G~~v~PG~ID~H~H~~~~~~~~~e~~~~~s~   77 (447)
T cd01315           1 DLVIKNGRVVTPDGVREADIAVKGGKIAAIGPDIANT---EAEEVIDAGGLVVMPGLIDTHVHINEPGRTEWEGFETGTK   77 (447)
T ss_pred             CEEEECCEEECCCCceEeEEEEECCEEEEEeCCCCCC---CCCeEEECCCCEEeccEeeceeccCCCCccccccHHHHHH
Confidence            5789999999987777899999999999998754311   3568999999999999999999999877777889999999


Q ss_pred             HHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCC
Q 015826          124 AAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN  203 (399)
Q Consensus       124 ~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~  203 (399)
                      +++++||||+++|+.++.|.....+.++..++.......++++++++....   ..++++++.+.|+.+||+++.++...
T Consensus        78 aal~gGvTtv~d~p~~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~ei~~l~~~G~~giKv~~~~~~~~  154 (447)
T cd01315          78 AAAAGGITTIIDMPLNSIPPTTTVENLEAKLEAAQGKLHVDVGFWGGLVPG---NLDQLRPLDEAGVVGFKCFLCPSGVD  154 (447)
T ss_pred             HHHhCCceEEEeCCCCCCCCcCCHHHHHHHHHHhccCceeeEEEEEeecCC---CHHHHHHHHHcCCcEEEEEecccCCC
Confidence            999999999999986556777778888888887766678888877654433   46678888889999999998764333


Q ss_pred             CCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 015826          204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG  283 (399)
Q Consensus       204 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~  283 (399)
                      .++..+.+++.+++++++++|+++++|+++.+.+.....+.. ..+..++..++.++|..+|..++.+++.+++++    
T Consensus       155 ~~~~~~~~~l~~~~~~a~~~g~~v~vH~e~~~~~~~~~~~~~-~~g~~~~~~~~~~~p~~~e~~~~~~~~~la~~~----  229 (447)
T cd01315         155 EFPAVDDEQLEEAMKELAKTGSVLAVHAENPEITEALQEQAK-AKGKRDYRDYLASRPVFTEVEAIQRILLLAKET----  229 (447)
T ss_pred             CcccCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHhHh-hcCCCChHHhhccCCHHHHHHHHHHHHHHHHHh----
Confidence            344578899999999999999999999999887665444322 222334456678899999999999999999976    


Q ss_pred             CCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCcc
Q 015826          284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID  363 (399)
Q Consensus       284 ~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id  363 (399)
                         |+++|++|+|+. ++++++++++++|.++++|+|||||.++.+++...++.++++||||++++|++||+++++|.+|
T Consensus       230 ---g~~ihi~h~s~~-~~~~~i~~~~~~g~~i~~e~~~h~l~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~g~i~  305 (447)
T cd01315         230 ---GCRLHIVHLSSA-EAVPLIREARAEGVDVTVETCPHYLTFTAEDVPDGGTEFKCAPPIRDAANQEQLWEALENGDID  305 (447)
T ss_pred             ---CCCEEEEeCCCH-HHHHHHHHHHHCCCceEEEeccccEEEcHHHccCCCCceEECCCCCChHHHHHHHHHHhCCcee
Confidence               899999999998 9999999999999999999999999999988877788999999999999999999999999999


Q ss_pred             EEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          364 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       364 ~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +|+|||+||+.++|..+..+|+.+++|++|+|+.+
T Consensus       306 ~i~SDh~p~~~~~k~~~~~~~~~~~~g~~g~~~~~  340 (447)
T cd01315         306 MVVSDHSPCTPELKLLGKGDFFKAWGGISGLQLGL  340 (447)
T ss_pred             EEeCCCCCCCHHHhccCCCChhhCCCCeeEHHHhH
Confidence            99999999999888755568999999999999864

But L-HYDs differ by having an L-enantio specificity and by lacking activity on possible natural substrates such as dihydropyrimidines. Allantoinase catalyzes the hydrolytic cleavage of the five-member ring of allantoin (5-ureidohydantoin) to form allantoic acid.

>PRK02382 dihydroorotase; Provisional

Probab=100.00  E-value=3.3e-55  Score=432.52  Aligned_cols=328  Identities=33%  Similarity=0.477  Sum_probs=273.5

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHH
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG  121 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~  121 (399)
                      |.+++|+|++|++.++..+++|+|+||||++|++....+   ++.++||++|++|+|||||+|+|+..++....+++.+.
T Consensus         1 ~~dl~i~n~~v~~~~~~~~~~v~I~dg~I~~i~~~~~~~---~~~~~id~~g~~v~PG~ID~H~H~~~~g~~~~e~~~~~   77 (443)
T PRK02382          1 MRDALLKDGRVYYNNSLQPRDVRIDGGKITAVGKDLDGS---SSEEVIDARGMLLLPGGIDVHVHFREPGYTHKETWYTG   77 (443)
T ss_pred             CceEEEECCEEEeCCCceEEEEEEECCEEEEecCCCCCC---CCCeEEECCCCEEcCCEeeeeeeccCCCCCchhhHHHH
Confidence            468999999999876667899999999999997643211   24579999999999999999999988877777888999


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEE-EEeecCC
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGL-KSFMCPS  200 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~i-k~~~~~~  200 (399)
                      +++++++||||+++++ ++.|.....+.+...++.+...+.++++++++..    ...++++++.+.|+.++ |+++...
T Consensus        78 ~~aa~~gGvTtv~~~~-~t~p~~~~~~~~~~~~~~a~~~s~v~~~~~~~~~----~~~~~l~~l~~~gv~~~gkv~~~~~  152 (443)
T PRK02382         78 SRSAAAGGVTTVVDQP-NTDPPTVDGESFDEKAELAARKSIVDFGINGGVT----GNWDPLESLWERGVFALGEIFMADS  152 (443)
T ss_pred             HHHHHhCCcEEEEECC-CCCCCCChHHHHHHHHHHhCcCceEEEEEEeeec----cchhhHHHHHhcCccceeEEEEEec
Confidence            9999999999999999 7777777778888877777666778888775432    12456777888899888 7876432


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhc
Q 015826          201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR  280 (399)
Q Consensus       201 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~  280 (399)
                      . .. ...+++.+.++++.++++|+++.+|+++.+........   ..+......|+.++|+.+|..++.+++.+|+++ 
T Consensus       153 ~-~~-~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~---~~g~~~~~~~~~~~p~~~E~~av~~~~~la~~~-  226 (443)
T PRK02382        153 T-GG-MGIDEELFEEALAEAARLGVLATVHAEDEDLFDELAKL---LKGDADADAWSAYRPAAAEAAAVERALEVASET-  226 (443)
T ss_pred             C-CC-cccCHHHHHHHHHHHHhcCCeEEEecCCHHHHHHhhHh---hcCCCCHhhCCCcCCHHHHHHHHHHHHHHHHHh-
Confidence            1 11 23577899999999999999999999998875432211   112223456678899999999999999999976 


Q ss_pred             cCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcC
Q 015826          281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG  360 (399)
Q Consensus       281 ~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G  360 (399)
                            |+++|++|+|+. ++++++++++     |+||+|||||+++++++...++++||+||||++++|++||+++++|
T Consensus       227 ------g~~~hi~h~ss~-~~~~~i~~~~-----vt~ev~ph~L~l~~~~~~~~~~~~k~~PPlr~~~d~~aL~~~l~~g  294 (443)
T PRK02382        227 ------GARIHIAHISTP-EGVDAARREG-----ITCEVTPHHLFLSRRDWERLGTFGKMNPPLRSEKRREALWERLNDG  294 (443)
T ss_pred             ------CCCEEEEECCCH-HHHHHHHHCC-----cEEEEchhhhhcCHHHHhccCceEEEcCCCCChHHHHHHHHHHhCC
Confidence                  899999999999 9999999774     9999999999999998866778899999999999999999999999


Q ss_pred             CccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       361 ~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +||+|+|||+||+.++|..   +|+++|+|++|+|+++
T Consensus       295 ~i~~i~sDh~P~~~~~K~~---~~~~~~~G~~g~e~~~  329 (443)
T PRK02382        295 TIDVVASDHAPHTREEKDA---DIWDAPSGVPGVETML  329 (443)
T ss_pred             CCCEEEcCCCCCCHHHhcC---ChhhCCCCcccHHHHH
Confidence            9999999999999988864   7999999999999875

>PLN02942 dihydropyrimidinase

Probab=100.00  E-value=1.6e-54  Score=431.50  Aligned_cols=338  Identities=23%  Similarity=0.310  Sum_probs=275.1

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC--CCCcCchH
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG--RTEWEGFP  119 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~--~~~~e~~~  119 (399)
                      +.+++|+|++|++++....++|+|+||+|++|++....+   .+.++||++|++|+|||||+|+|+.++.  ....++++
T Consensus         4 ~~~lli~~~~v~~~~~~~~~~i~I~~g~I~~i~~~~~~~---~~~~~iD~~g~~v~PG~ID~H~H~~~~~~~~~~~ed~~   80 (486)
T PLN02942          4 STKILIKGGTVVNAHHQELADVYVEDGIIVAVAPNLKVP---DDVRVIDATGKFVMPGGIDPHTHLAMPFMGTETIDDFF   80 (486)
T ss_pred             CCcEEEECcEEEcCCCCeEeEEEEECCEEEEEcCCCCCC---CCCeEEECCCCEEecCEeeeeeccCcccCCCcccchHH
Confidence            358899999999977666789999999999998753211   2467999999999999999999999873  45678999


Q ss_pred             HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHH-cCCcEEEEeec
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSFMC  198 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~~~ik~~~~  198 (399)
                      +++++++++||||++||+..  ......+.++...+.+. +..++++++.+.........++++++.+ .|+.++|.++.
T Consensus        81 s~s~aAl~gGvTTv~D~~~~--~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~e~~~l~~~~gv~~~k~~~~  157 (486)
T PLN02942         81 SGQAAALAGGTTMHIDFVIP--VNGNLLAGYEAYEKKAE-KSCMDYGFHMAITKWDDTVSRDMETLVKEKGINSFKFFMA  157 (486)
T ss_pred             HHHHHHHcCCCeEEEeCCCC--CCCCHHHHHHHHHHHHh-hcCCCEEEEEEecCCcHhHHHHHHHHHHhCCCceEEEEEe
Confidence            99999999999999999621  12223566666555554 4568888776654433333456777754 68889999887


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhh
Q 015826          199 PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD  278 (399)
Q Consensus       199 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~  278 (399)
                      +++   ....+++.+.++++.++++|.++++|+|+.++.....++.. ..+......++..||+.+|..++.+++.+++.
T Consensus       158 ~~~---~~~~~~~~l~~~~~~a~~~~~~v~~HaE~~~~~~~~~~~~~-~~G~~~~~~~~~~rP~~~E~~av~~~~~la~~  233 (486)
T PLN02942        158 YKG---SLMVTDELLLEGFKRCKSLGALAMVHAENGDAVFEGQKRMI-ELGITGPEGHALSRPPLLEGEATARAIRLAKF  233 (486)
T ss_pred             cCC---CCCCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH-HcCCCChhhhhccCCchHHHHHHHHHHHHHHH
Confidence            642   23458899999999999999999999999887654443221 11222344567789999999999999999987


Q ss_pred             hccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC----CCcceEEcCCCCChhhHHHHH
Q 015826          279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRDAANKEKLW  354 (399)
Q Consensus       279 ~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~----~~~~~~~~Pplr~~~~~~~l~  354 (399)
                      +       |+++|++|+|+. ++++.|+.+|++|++|++|+|||||+|+++++..    .++.+||+||||++++|++||
T Consensus       234 ~-------g~~~~i~H~s~~-~~~e~i~~~k~~G~~Vt~e~~ph~L~l~~~~~~~~~~~~~~~~k~~PPlr~~~~~~~L~  305 (486)
T PLN02942        234 V-------NTPLYVVHVMSI-DAMEEIARARKSGQRVIGEPVVSGLVLDDSKLWDPDFTIASKYVMSPPIRPAGHGKALQ  305 (486)
T ss_pred             h-------CCCEEEEECCCH-HHHHHHHHHHHCCCcEEEEECchhheeCHHHhcCcccccCcceEECCCCCCHHHHHHHH
Confidence            6       899999999999 9999999999999999999999999999988753    578899999999999999999


Q ss_pred             HHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhccc
Q 015826          355 EALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG  397 (399)
Q Consensus       355 ~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~  397 (399)
                      +++++|++|+|+|||+||+.++|..+.++|+++++|++|+|+.
T Consensus       306 ~~l~~G~i~~igTDh~p~~~~~k~~~~~~~~~~~~G~~g~e~~  348 (486)
T PLN02942        306 AALSSGILQLVGTDHCPFNSTQKAFGKDDFRKIPNGVNGIEER  348 (486)
T ss_pred             HHhcCCceEEEECCCCCCChHHhhcccCCHhhCCCCcccHHHH
Confidence            9999999999999999999888876556899999999999985

>PRK01211 dihydroorotase; Provisional

Probab=100.00  E-value=1.1e-54  Score=420.64  Aligned_cols=299  Identities=25%  Similarity=0.356  Sum_probs=243.9

Q ss_pred             EEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHHHHH
Q 015826           47 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAA  126 (399)
Q Consensus        47 i~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al  126 (399)
                      |.| +++..+....++|+|+||||++|++..      .+.++||++| +|+|||||+|+|++.++...+|++.+++++|+
T Consensus         3 ~~~-~~~~~~~~~~~di~I~dGkI~~i~~~~------~~~~~ida~g-~vlPG~ID~HvH~r~pg~~~ked~~s~s~AAa   74 (409)
T PRK01211          3 ICG-NFYYKGKFDYLEIEVEDGKIKSIKKDA------GNIGKKELKG-AILPAATDIHVHFRTPGETEKEDFSTGTLSAI   74 (409)
T ss_pred             eec-eeEEcCcEEEEEEEEECCEEEEecCCC------CCceEEEecc-EEcCCeEEeeeccCCCCCcccCcHHHHHHHHH
Confidence            444 445454566799999999999998643      1457899999 89999999999999999999999999999999


Q ss_pred             cCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCC
Q 015826          127 AGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFP  206 (399)
Q Consensus       127 ~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~  206 (399)
                      +|||||++||| ++.|...+.+.+..+.+.+...+.+||+++.+....+    .   ++.+.|+.++|.|+.+.......
T Consensus        75 aGGvTtv~dmP-nt~P~~~~~e~~~~~~~~a~~~s~vd~~~~~~~~~~~----~---~~~~~g~~~~k~f~~~~~~~~~~  146 (409)
T PRK01211         75 FGGTTFIMDMP-NNNIPIKDYNAFSDKLGRVAPKAYVDFSLYSMETGNN----A---LILDERSIGLKVYMGGTTNTNGT  146 (409)
T ss_pred             cCCcEEEEECC-CCCCCCChHHHHHHHHHHhccCceeeEEEEeccCCch----h---hHHhccCcEEEEEcCCCcCCCcc
Confidence            99999999999 6778888899999998888878889999887764322    1   23345999999987542100000


Q ss_pred             CCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCC
Q 015826          207 MTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAE  286 (399)
Q Consensus       207 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~  286 (399)
                      ...+    ..++.++++|+++.+|+|+.+.+..+.++.      .....++.+||..+|..++.+++.++++        
T Consensus       147 ~~~~----~~l~~~~~~g~~v~~H~E~~~l~~~~~~~~------~~~~~~~~~rP~~aE~~ai~~~~~la~~--------  208 (409)
T PRK01211        147 DIEG----GEIKKINEANIPVFFHAELSECLRKHQFES------KNLRDHDLARPIECEIKAVKYVKNLDLK--------  208 (409)
T ss_pred             ccCH----HHHHHHHccCCEEEEeccChHHhhhhhhCc------chHhhCCCCCCHHHHHHHHHHHHHHhCC--------
Confidence            1222    244666789999999999998766443322      1234577899999999999999999974        


Q ss_pred             CceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEe
Q 015826          287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLS  366 (399)
Q Consensus       287 g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~  366 (399)
                        ++|++|+|++ +++          .+||||||||||+|++++  .+++++||+||||+++||++||++|++|+||+|+
T Consensus       209 --~~hi~HvSt~-~~~----------~~vt~Ev~phhL~l~~~~--~~~~~~kvnPPLRs~~d~~aL~~~l~dG~ID~i~  273 (409)
T PRK01211        209 --TKIIAHVSSI-DVI----------GRFLREVTPHHLLLNDDM--PLGSYGKVNPPLRDRWTQERLLEEYISGRFDILS  273 (409)
T ss_pred             --CcEEEEecCh-hhc----------CceEEEecHHHHcccccc--ccCCceeEcCCCCCHHHHHHHHHHHhCCCCCEEe
Confidence              4999999998 776          289999999999999887  2678999999999999999999999999999999


Q ss_pred             CCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          367 SDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       367 sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      |||+||+.++|.    +|+++|+|++|+|++|
T Consensus       274 SDHaP~~~~eK~----~~~~a~~G~~gle~~l  301 (409)
T PRK01211        274 SDHAPHTEEDKQ----EFEYAKSGIIGVETRV  301 (409)
T ss_pred             CCCCCCChhHhC----CHhhCCCCCCcHHHHH
Confidence            999999988872    6999999999999965

>TIGR00857 pyrC_multi dihydroorotase, multifunctional complex type

Probab=100.00  E-value=4.6e-54  Score=420.48  Aligned_cols=313  Identities=34%  Similarity=0.496  Sum_probs=267.4

Q ss_pred             eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcC
Q 015826           59 ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL  138 (399)
Q Consensus        59 ~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~  138 (399)
                      .+++|+|+||||++|++.. .+   .+.++||++|++|+|||||+|+|+..++....+++.+.++.++++||||+++++ 
T Consensus         4 ~~~~v~I~~g~I~~i~~~~-~~---~~~~~ida~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~-   78 (411)
T TIGR00857         4 TEVDILVEGGRIKKIGKLR-IP---PDAEVIDAKGLLVLPGFIDLHVHLRDPGEEYKEDIESGSKAAAHGGFTTVADMP-   78 (411)
T ss_pred             EEEEEEEECCEEEEeeccC-CC---CCCeEEECCCCEEecCEEEcccCCCCCCCccHhHHHHHHHHHHhCCeEEEEEec-
Confidence            5789999999999997421 11   245799999999999999999999876656678888999999999999999999 


Q ss_pred             CCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCCh-hhHHHHHHHHHcCCcE--EEEeecCCCCCCCCCCCHHHHHH
Q 015826          139 NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA-YNASALEALLNAGVLG--LKSFMCPSGINDFPMTNASHIKE  215 (399)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~~G~~~--ik~~~~~~~~~~~~~~~~~~l~~  215 (399)
                      ++.|.....+.++...+.++....+++.+++++..... ...+++.++.+.|+.+  ++.+       +.+..+++.+.+
T Consensus        79 ~t~p~~~~~~~l~~~~~~~~~~~~vd~~~~~~~~~~~~~~~l~e~~~l~~~Gv~g~~f~~~-------~~~~~~~~~l~~  151 (411)
T TIGR00857        79 NTKPPIDTPETLEWKLQRLKKVSLVDVHLYGGVTQGNQGKELTEAYELKEAGAVGRMFTDD-------GSEVQDILSMRR  151 (411)
T ss_pred             CCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEecCCccccHHHHHHHHHCCcEEEEEEeC-------CcccCCHHHHHH
Confidence            66677777788888888877777899998888765432 2466778888889988  5532       123468899999


Q ss_pred             HHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcC
Q 015826          216 GLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHL  295 (399)
Q Consensus       216 ~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~  295 (399)
                      +++.++++|+++.+|+|+.+++....+..+    ......|+.+||+.+|..++.+++.+++++       ++++||+|+
T Consensus       152 ~~~~a~~~g~~v~iH~E~~~l~~~~~~~~g----~~~~~~~~~~~p~~aE~~ai~~~~~la~~~-------~~~~~i~Hv  220 (411)
T TIGR00857       152 ALEYAAIAGVPIALHAEDPDLIYGGVMHEG----PSAAQLGLPARPPEAEEVAVARLLELAKHA-------GCPVHICHI  220 (411)
T ss_pred             HHHHHHHcCCEEEEecCCHHHHhhhhhcCC----cccHhhCCCCCCHHHHHHHHHHHHHHHHHH-------CCCEEEEeC
Confidence            999999999999999999987665444332    234567889999999999999999999976       899999999


Q ss_pred             CChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcc
Q 015826          296 SDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPE  375 (399)
Q Consensus       296 s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~  375 (399)
                      |+. +++++|+++|++|++|+||||||||++++++++.+++++||+||||++++|++||+++++|.||+|+|||+||+.+
T Consensus       221 s~~-~~l~~i~~a~~~g~~v~~ev~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~~~~L~~~l~~g~i~~i~sDh~p~~~~  299 (411)
T TIGR00857       221 STK-ESLELIVKAKSQGIKITAEVTPHHLLLSEEDVARLDGNGKVNPPLREKEDRLALIEGLKDGIIDIIATDHAPHTLE  299 (411)
T ss_pred             CCH-HHHHHHHHHHHcCCcEEEeechhhheecHHHHhCCCccEEEcCCCCCHHHHHHHHHHHhcCCCcEEEcCCCCCChH
Confidence            999 9999999999999999999999999999998877788999999999999999999999999999999999999988


Q ss_pred             cccCCcCCcccccCCcchhcccc
Q 015826          376 LKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       376 ~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +|..   +|+.+++|++|+|+++
T Consensus       300 ~k~~---~~~~~~~G~~g~e~~~  319 (411)
T TIGR00857       300 EKTK---EFAAAPPGIPGLETAL  319 (411)
T ss_pred             HccC---CHhhCCCCceeHHHHH
Confidence            8853   7999999999999854

All proteins described by this model should represent active and inactive dihydroorotase per se and functionally equivalent domains of multifunctional proteins from higher eukaryotes, but exclude related proteins such as allantoinase.

>PRK08323 phenylhydantoinase; Validated

Probab=100.00  E-value=2.1e-53  Score=423.21  Aligned_cols=336  Identities=27%  Similarity=0.394  Sum_probs=278.3

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC--CCCcCchHH
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG--RTEWEGFPS  120 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~--~~~~e~~~~  120 (399)
                      ++++|+|++|+++++..+++|+|+||||++|++.   .    +.++||++|++|+|||||+|+|+..+.  ....++++.
T Consensus         1 ~d~li~n~~v~~~~~~~~~~v~I~~g~I~~i~~~---~----~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~e~~~~   73 (459)
T PRK08323          1 MSTLIKNGTVVTADDTYKADVLIEDGKIAAIGAN---L----GDEVIDATGKYVMPGGIDPHTHMEMPFGGTVSSDDFET   73 (459)
T ss_pred             CcEEEECCEEEcCCCceEEEEEEECCEEEEEecC---C----CceEEECCCCEEeccEEeeeeccccccCCccccCcHHH
Confidence            3689999999998877789999999999999864   1    457999999999999999999998763  346788889


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPS  200 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~  200 (399)
                      .++.++++||||+++|+ ++.|.....+.++...+.......++++++........+.+++++++++.|+.++|+++.++
T Consensus        74 ~~~~a~~~GvTt~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~  152 (459)
T PRK08323         74 GTRAAACGGTTTIIDFA-LQPKGQSLREALEAWHGKAAGKAVIDYGFHMIITDWNEVVLDEMPELVEEGITSFKLFMAYK  152 (459)
T ss_pred             HHHHHHhCCCCEEEeCc-CCCCCCChHHHHHHHHHHhccCceEEEEEEEEecCCcHHHHHHHHHHHHcCCCEEEEEEecC
Confidence            99999999999999998 44454556667776666655667788877655433344456788888889999999988654


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhc
Q 015826          201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR  280 (399)
Q Consensus       201 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~  280 (399)
                      +   .+.+++++++++++.|+++|.++++|+++.+.+.....+.. ..+......|+..+|..+|..++.+++++++.+ 
T Consensus       153 ~---~~~~s~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~-~~g~~~~~~~~~~~p~~~e~~~v~~~~~~a~~~-  227 (459)
T PRK08323        153 G---ALMLDDDELLRALQRAAELGALPMVHAENGDAIAYLQAKLL-AEGKTGPEYHALSRPPEVEGEATNRAIMLAELA-  227 (459)
T ss_pred             C---CCCCCHHHHHHHHHHHHhcCCEEEEEcCChHHHHHHHHHHH-HcCCCChhhhhccCCHHHHHHHHHHHHHHHHHh-
Confidence            2   34679999999999999999999999998776543332210 112333445778899999999999999999976 


Q ss_pred             cCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC----CCcceEEcCCCCChhhHHHHHHH
Q 015826          281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRDAANKEKLWEA  356 (399)
Q Consensus       281 ~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~----~~~~~~~~Pplr~~~~~~~l~~~  356 (399)
                            ++++|++|+|+. +++++|+.+|++|++|+||+|||||+++.+.+..    +|..+|++||||+++++++||++
T Consensus       228 ------~~~~~i~H~s~~-~~~~~i~~ak~~g~~vt~e~~p~~l~l~~~~~~~~~~~~g~~~k~~pPlr~~~~~~~l~~~  300 (459)
T PRK08323        228 ------GAPLYIVHVSCK-EALEAIRRARARGQRVFGETCPQYLLLDESEYDGPDWFEGAKYVMSPPLRDKEHQDALWRG  300 (459)
T ss_pred             ------CCCEEEEeCCCH-HHHHHHHHHHHCCCeEEEEcCccceeecHHHhcCCccccccceEECCCCCChHHHHHHHHH
Confidence                  899999999998 9999999999999999999999999999987754    36789999999999999999999


Q ss_pred             HhcCCccEEeCCCCCCCccccc-CCcCCcccccCCcchhcccc
Q 015826          357 LMDGHIDMLSSDHSPTVPELKL-LDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       357 l~~G~id~i~sdh~p~~~~~k~-~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +++|.+|+|+|||+||+.++|. .+.++|+.+|+|++|+|+.+
T Consensus       301 l~~G~i~~i~sDh~p~~~~~~~~~~~~~~~~~p~G~~~~e~~~  343 (459)
T PRK08323        301 LQDGDLQVVATDHCPFCFEQKKQLGRGDFTKIPNGTPGVEDRM  343 (459)
T ss_pred             hhcCCeeEEECCCCCCChHHhcccccCCHhhCCCCcchHhhhH
Confidence            9999999999999999987774 34457999999999999764

>PRK09060 dihydroorotase; Validated

Probab=100.00  E-value=1.6e-53  Score=419.84  Aligned_cols=324  Identities=30%  Similarity=0.477  Sum_probs=266.4

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHH
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT  122 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~  122 (399)
                      ++++|+|++|+++++...++|.|+||+|++|++....    ++.++||++|++|+|||||+|+|+..++...++++.+.+
T Consensus         5 ~d~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~----~~~~~iD~~G~~v~PG~ID~HvH~~~~~~~~~e~~~t~~   80 (444)
T PRK09060          5 FDLILKGGTVVNPDGEGRADIGIRDGRIAAIGDLSGA----SAGEVIDCRGLHVLPGVIDSQVHFREPGLEHKEDLETGS   80 (444)
T ss_pred             CcEEEECCEEECCCCCeeeEEEEECCEEEEecCCCCC----CCceEEECCCCEEccCEEeccccccCCCCCccchHHHHH
Confidence            5789999999998877789999999999999864321    245799999999999999999999888877888999999


Q ss_pred             HHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHH-cCCcEEEEeecCCC
Q 015826          123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSFMCPSG  201 (399)
Q Consensus       123 ~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~~~ik~~~~~~~  201 (399)
                      ++++++||||+++|+ ++.|...+.+.+...++.+.....++++++++....+.   +++.++.. .|+.++|.|+....
T Consensus        81 ~aa~~gGvTtv~~~p-~~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~~---~~l~el~~~~gv~g~k~fm~~~~  156 (444)
T PRK09060         81 RAAVLGGVTAVFEMP-NTNPLTTTAEALADKLARARHRMHCDFAFYVGGTRDNA---DELAELERLPGCAGIKVFMGSST  156 (444)
T ss_pred             HHHHhCCcEEEEECC-CCCCCCChHHHHHHHHHHhcccceeeEEEEeccCCCCH---HHHHHHHhhcCceEEEEEeccCC
Confidence            999999999999999 67777778888888888777667889988875543332   33444422 48899998875421


Q ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhH--HhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhh
Q 015826          202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH--VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDT  279 (399)
Q Consensus       202 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~  279 (399)
                       ......++..+.+++++   .|.++.+|+|+.+.+...  +.+.    +  ....++.+||+.+|..++++++.+++++
T Consensus       157 -~~~~~~d~~~l~~~~~~---~~~~v~~H~E~~~l~~~~~~~~~~----g--~~~~~~~~~p~~aE~~av~~~~~la~~~  226 (444)
T PRK09060        157 -GDLLVEDDEGLRRILRN---GRRRAAFHSEDEYRLRERKGLRVE----G--DPSSHPVWRDEEAALLATRRLVRLARET  226 (444)
T ss_pred             -CCcccCCHHHHHHHHHh---CCCeEEEECCCHHHHHHHHHHHhc----C--CcccccccCCHHHHHHHHHHHHHHHHHH
Confidence             11223466667776544   589999999998875422  2211    1  3445677899999999999999999986


Q ss_pred             ccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEcccccccccccc-CCCCCcceEEcCCCCChhhHHHHHHHHh
Q 015826          280 RTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE-IPDGDTRFKCAPPIRDAANKEKLWEALM  358 (399)
Q Consensus       280 ~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~-~~~~~~~~~~~Pplr~~~~~~~l~~~l~  358 (399)
                             |+|+|++|+|+. +++++++++|+   .+|||+|||||+|++++ +..+++++|++||||++++|++||++++
T Consensus       227 -------~~~lhi~h~st~-~~v~~i~~~~~---~vt~ev~ph~l~l~~~~~~~~~~~~~k~~PPlr~~~~~~~l~~al~  295 (444)
T PRK09060        227 -------GRRIHVLHVSTA-EEIDFLADHKD---VATVEVTPHHLTLAAPECYERLGTLAQMNPPIRDARHRDGLWRGVR  295 (444)
T ss_pred             -------CCCEEEEeCCCH-HHHHHHHHhCC---CeEEEeChHHhccCchhhcccCCceEEEeCCCCCHHHHHHHHHHHh
Confidence                   999999999999 99999998875   39999999999999987 6667889999999999999999999999


Q ss_pred             cCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       359 ~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +|+||+++|||+||+.++|..   +|+++++|++|+|+++
T Consensus       296 ~G~id~i~sDh~p~~~~~k~~---~~~~~~~G~~g~e~~~  332 (444)
T PRK09060        296 QGVVDVLGSDHAPHTLEEKAK---PYPASPSGMTGVQTLV  332 (444)
T ss_pred             CCCccEEecCCCCCCHHHhcC---CcccCCCCcccHHHHH
Confidence            999999999999999988864   7999999999999864

>PRK07575 dihydroorotase; Provisional

Probab=100.00  E-value=1.8e-53  Score=418.93  Aligned_cols=328  Identities=27%  Similarity=0.423  Sum_probs=266.4

Q ss_pred             CccEEEEccEEEcCCC-ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHH
Q 015826           42 YNQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS  120 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~  120 (399)
                      |++++|+|++|+++++ ...++|.|+||||++|++....+   .+.++||++|++|+|||||+|+|+..++..+++++++
T Consensus         2 ~~~~~i~~~~i~~~~~~~~~~~I~I~dg~I~~ig~~~~~~---~~~~vid~~g~~v~PG~ID~H~H~~~~~~~~~e~~~~   78 (438)
T PRK07575          2 MMSLLIRNARILLPSGELLLGDVLVEDGKIVAIAPEISAT---AVDTVIDAEGLTLLPGVIDPQVHFREPGLEHKEDLFT   78 (438)
T ss_pred             cceEEEECCEEECCCCCEEeeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEcccEEEeeeccCCCCCcCcchHHH
Confidence            5678999999998766 45789999999999998753211   1357899999999999999999998887778899999


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPS  200 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~  200 (399)
                      .+++++++||||++||+ ++.|...+.+.+...++.+.....++++++++..+.   ...++..+  .|+.++|.|+...
T Consensus        79 ~~~aa~~gGvTt~~dmp-~~~p~~~~~~~~~~~~~~a~~~~~v~~~~~~~~~~~---~l~~l~~~--~~~~g~~~f~~~~  152 (438)
T PRK07575         79 ASRACAKGGVTSFLEMP-NTKPLTTTQAALDDKLARAAEKCVVNYGFFIGATPD---NLPELLTA--NPTCGIKIFMGSS  152 (438)
T ss_pred             HHHHHHhCCEEEEEECC-CCCCCCCcHHHHHHHHHHhccCcEEEEEEEcccccc---CHHHHHHh--hCCeEEEEEEeeC
Confidence            99999999999999999 777888888889888888777778999988766532   23344332  3677899886432


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhc
Q 015826          201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR  280 (399)
Q Consensus       201 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~  280 (399)
                      . ...+..+...+++++   ++.+.++.+|+|+.+.+......   ..++.....++..+|+.+|..++.+++++++++ 
T Consensus       153 ~-~~~~~~~~~~~~~~~---~~~~~~v~~h~e~~~l~~~~~~~---~~g~~~~~~~~~~~p~~aE~~av~~~~~la~~~-  224 (438)
T PRK07575        153 H-GPLLVDEEAALERIF---AEGTRLIAVHAEDQARIRARRAE---FAGISDPADHSQIQDEEAALLATRLALKLSKKY-  224 (438)
T ss_pred             C-CCcccCcHHHHHHHH---HhCCCEEEEeCcChHHHHhhhHh---hccCcCcccccccCcHHHHHHHHHHHHHHHHHH-
Confidence            1 111122344555443   36799999999998864322211   122334456677899999999999999999986 


Q ss_pred             cCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcC
Q 015826          281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG  360 (399)
Q Consensus       281 ~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G  360 (399)
                            |+++|++|+|++ +++++++++|  +..++||||||||+|+++++...++.+|++||||++++|++||+++++|
T Consensus       225 ------g~~lhi~HiSt~-~~v~~i~~~k--~~~vt~ev~phhL~l~~~~~~~~~~~~k~~PPLR~~~d~~~L~~~l~~G  295 (438)
T PRK07575        225 ------QRRLHILHLSTA-IEAELLRQDK--PSWVTAEVTPQHLLLNTDAYERIGTLAQMNPPLRSPEDNEALWQALRDG  295 (438)
T ss_pred             ------CCCEEEEECCCH-HHHHHHHHhc--CCCEEEEEchhhheeCHHHHhCCCceEEEeCCCCCHHHHHHHHHHHhCC
Confidence                  999999999999 9999999887  4789999999999999998876788999999999999999999999999


Q ss_pred             CccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       361 ~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +||+|+|||+||+.++|..   +|+++|+|++|+|+.|
T Consensus       296 ~id~i~sDh~p~~~~~k~~---~~~~~~~G~~g~e~~l  330 (438)
T PRK07575        296 VIDFIATDHAPHTLEEKAQ---PYPNSPSGMPGVETSL  330 (438)
T ss_pred             CCCEEecCCCCCCHHHccC---CcccCCCCcccHHHHH
Confidence            9999999999999988863   7999999999999875

>cd01314 D-HYD D-hydantoinases (D-HYD) also called dihydropyrimidases (DHPase) and related proteins; DHPases are a family of enzymes that catalyze the reversible hydrolytic ring opening of the amide bond in five- or six-membered cyclic diamides, like dihydropyrimidine or hydantoin

Probab=100.00  E-value=5.7e-53  Score=418.60  Aligned_cols=338  Identities=27%  Similarity=0.391  Sum_probs=277.9

Q ss_pred             EEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC--CCcCchHHHH
Q 015826           45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGFPSGT  122 (399)
Q Consensus        45 ~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~--~~~e~~~~~~  122 (399)
                      ++|+|++|+++++..+++|+|+||||++|++....+   .+.++||++|++|||||||+|+|+.++..  .+.++++..+
T Consensus         1 lli~~~~v~~~~~~~~~~i~I~~g~I~~ig~~~~~~---~~~~viD~~g~~vlPGlID~H~H~~~~~~~~~~~e~~~~~~   77 (447)
T cd01314           1 LIIKNGTIVTADGSFKADILIEDGKIVAIGPNLEAP---GGVEVIDATGKYVLPGGIDPHTHLELPFMGTVTADDFESGT   77 (447)
T ss_pred             CEEECCEEECCCCceeeeEEEECCEEEEeeCCCCCC---CCceEEECCCCEEecCEEeccccccccccCccCcchHHHHH
Confidence            479999999988777899999999999998753221   24579999999999999999999987653  4678899999


Q ss_pred             HHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCC
Q 015826          123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGI  202 (399)
Q Consensus       123 ~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~  202 (399)
                      +.++.+||||++||+ ++.|.....+.++...+.......++++++........+.+++++++.+.|+.++|.++.++. 
T Consensus        78 ~~a~~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~~g~~~ik~~~~~~~-  155 (447)
T cd01314          78 RAAAAGGTTTIIDFA-IPNKGQSLLEAVEKWRGKADGKSVIDYGFHMIITDWTDSVIEELPELVKKGISSFKVFMAYKG-  155 (447)
T ss_pred             HHHHhCCCcEEEeCC-CCCCCCCHHHHHHHHHHHhcCCCcccEEEEEeecCCChHHHHHHHHHHHcCCCEEEEEeccCC-
Confidence            999999999999998 455545556777766666556667787776554433444567788888889999999887642 


Q ss_pred             CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccC
Q 015826          203 NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTD  282 (399)
Q Consensus       203 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~  282 (399)
                        .+.++++.+++++++|+++|+++++|+|+........++.. ..+......|+..+|+.+|..++.+++.+++.+   
T Consensus       156 --~~~~s~~~l~~~~~~a~~~g~~v~~H~E~~~~~~~~~~~~~-~~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~---  229 (447)
T cd01314         156 --LLMVDDEELLDVLKRAKELGALVMVHAENGDVIAELQKKLL-AQGKTGPEYHALSRPPEVEAEATARAIRLAELA---  229 (447)
T ss_pred             --CCCCCHHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH-HcCCCChHHhhhcCCHHHHHHHHHHHHHHHHHh---
Confidence              24579999999999999999999999998876554433210 112233345677899999999999999999865   


Q ss_pred             CCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCC--C-CCcceEEcCCCCChhhHHHHHHHHhc
Q 015826          283 GPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP--D-GDTRFKCAPPIRDAANKEKLWEALMD  359 (399)
Q Consensus       283 ~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~--~-~~~~~~~~Pplr~~~~~~~l~~~l~~  359 (399)
                          ++++|++|+|+. ++++.|+.+|++|+++++++|||||+++++.+.  . .|+.+|++||||++++|++||+++++
T Consensus       230 ----~~~~~~~H~s~~-~~~~~i~~~k~~g~~v~~~~~ph~l~~~~~~~~~~~~~g~~~~~~pplr~~~~~~~l~~~l~~  304 (447)
T cd01314         230 ----GAPLYIVHVSSK-EAADEIARARKKGLPVYGETCPQYLLLDDSDYWKDWFEGAKYVCSPPLRPKEDQEALWDGLSS  304 (447)
T ss_pred             ----CCCEEEEeCCCH-HHHHHHHHHHHCCCeEEEecCchhheeCHHHhccccccccceEECCCCCChHHHHHHHHHHhC
Confidence                899999999999 999999999999999999999999999998773  2 57889999999999999999999999


Q ss_pred             CCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          360 GHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       360 G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      |.+|+|+|||+||+.++|.....+|+++|+|++|+|+.+
T Consensus       305 G~i~~igsDh~~~~~~~k~~~~~~~~~~~~G~~g~e~~l  343 (447)
T cd01314         305 GTLQTVGSDHCPFNFAQKARGKDDFTKIPNGVPGVETRM  343 (447)
T ss_pred             CCeeEEECCCCCCCHHHhhcccCCHhhCCCCCchHhhhH
Confidence            999999999999998888654458999999999999864

The hydrolysis of dihydropyrimidines is the second step of reductive catabolism of pyrimidines in human. The hydrolysis of 5-substituted hydantoins in microorganisms leads to enantiomerically pure N-carbamyl amino acids, which are used for the production of antibiotics, peptide hormones, pyrethroids, and pesticides. HYDs are classified depending on their stereoselectivity. This family also includes collapsin response regulators (CRMPs), cytosolic proteins involved in neuronal differentiation and axonal guidance which have strong homology to DHPases, but lack most of the active site residues.

>KOG2584 consensus Dihydroorotase and related enzymes [Nucleotide transport and metabolism]

Probab=100.00  E-value=5.2e-53  Score=386.43  Aligned_cols=340  Identities=26%  Similarity=0.339  Sum_probs=298.9

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC--CCCCcCchHH
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPS  120 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~--~~~~~e~~~~  120 (399)
                      .+++|+||+|++.+....+||+++||.|.+|++....+   .+.++||++|++|+||.||.|||+.+|  |...++|+..
T Consensus        14 ~rllikgg~vvN~d~~~~aDV~vedGiI~~vg~~l~ip---gg~~~ida~g~~ViPGgID~Hthlq~p~~G~ts~DdF~~   90 (522)
T KOG2584|consen   14 NRLLIKGGRVVNDDQSFKADVYVEDGIIKEVGENLIIP---GGVKVIDATGKMVIPGGIDPHTHLQMPFMGMTSVDDFFQ   90 (522)
T ss_pred             cceeeeCCEEEccCCceeeeEEeccCEEEEecccEEcC---CCceEEecCCcEEecCccCccceeccccCCccchhhhhc
Confidence            57999999999999888999999999999999986654   377899999999999999999999998  7789999999


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHH-cCCcEEEEeecC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSFMCP  199 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~~~ik~~~~~  199 (399)
                      ++++|+.+|+|+++|++.+. +.....+.++.+++.+..+..|||++|.+++.......++++-+.+ .|+.+|++||.+
T Consensus        91 GTkAAlaGGtTmiID~vlp~-~~~slv~afe~wr~~Ad~k~cCDyglhv~It~W~~~v~eem~~l~~ekGvnsF~~fmay  169 (522)
T KOG2584|consen   91 GTKAALAGGTTMIIDFVLPD-KGTSLVEAFEKWREWADPKVCCDYGLHVGITWWSPSVKEEMEILVKEKGVNSFKFFMAY  169 (522)
T ss_pred             ccHHHhcCCceEEEEEecCC-CCchHHHHHHHHHhhcCCceeeeeeeeEeeeecCcchHHHHHHHhhhcCcceEEeeeee
Confidence            99999999999999998543 3445678889999998889999999999998876666677777764 799999999998


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhh
Q 015826          200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDT  279 (399)
Q Consensus       200 ~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~  279 (399)
                      .   +.+++++++|.+++..++++|...++|+|+.+.+.+..++.. +.+...+..|..+||+..|.+++.+++.+|+..
T Consensus       170 k---~~~~v~d~~lye~l~~~~~lgala~vHAEngd~iae~q~~~l-~~gitgPEgh~lSRPee~EaEA~~rai~ia~~~  245 (522)
T KOG2584|consen  170 K---DLYMVRDSELYEALKVCAELGALAMVHAENGDAIAEGQQRLL-ELGITGPEGHELSRPEELEAEATNRAITIARQA  245 (522)
T ss_pred             c---cccccCHHHHHHHHHHHhhcchhheehhhcchhhhhhhhHHH-HcCCcCcccccccCchhhhHHHHHHHHHHHHhc
Confidence            5   456789999999999999999999999999998765554443 334445556778999999999999999999975


Q ss_pred             ccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC----CCcceEEcCCCCChh-hHHHHH
Q 015826          280 RTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRDAA-NKEKLW  354 (399)
Q Consensus       280 ~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~----~~~~~~~~Pplr~~~-~~~~l~  354 (399)
                             ++|++++|+.+. .+.++|..+|++|.-+..|+..-.|..+...+.+    ..+.|+++||||+.. +++.||
T Consensus       246 -------ncPlyvvhVmsk-saa~~Ia~aRk~g~~v~gepita~l~~dg~hy~~~~w~~Aa~~v~sPPlr~d~~t~~~L~  317 (522)
T KOG2584|consen  246 -------NCPLYVVHVMSK-SAADAIALARKKGRVVFGEPITASLGTDGSHYWSKDWDHAAAFVTSPPLRPDPTTPDGLM  317 (522)
T ss_pred             -------CCCcceEEEeeh-hHHHHHHHHHhcCceeecccchhhhcccchhhccCChhhcceeeeCCCCCCCCCCHHHHH
Confidence                   999999999998 8999999999999999999888888877655433    246899999999776 999999


Q ss_pred             HHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          355 EALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       355 ~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      ++|+.|.+..++||||||+.+.|.++++||.++|.|+.|+|..+
T Consensus       318 ~lLa~g~L~~tgSdhctf~~~qKalgKddFt~ip~GvnGvedrM  361 (522)
T KOG2584|consen  318 DLLAEGDLQLTGSDHCTFTTEQKALGKDDFTKIPNGVNGVEDRM  361 (522)
T ss_pred             HHHhcCccceeecCCCCCCHHHHhhccCccccCCCccccccccc
Confidence            99999999999999999999999999999999999999999765

>PRK09357 pyrC dihydroorotase; Validated

Probab=100.00  E-value=2.6e-52  Score=410.86  Aligned_cols=328  Identities=32%  Similarity=0.456  Sum_probs=273.8

Q ss_pred             cEEEEccEEEcCCC-ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHH
Q 015826           44 QYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT  122 (399)
Q Consensus        44 ~~li~n~~vv~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~  122 (399)
                      +++|+|++|+++++ ..+++|.|+||+|++|++... .   ++.++||++|++|+|||||+|+|++.++....+++...+
T Consensus         2 ~~~i~~~~v~~~~~~~~~~~I~I~dg~I~~i~~~~~-~---~~~~~iD~~g~~v~PG~ID~H~H~~~~~~~~~e~~~~~~   77 (423)
T PRK09357          2 MILIKNGRVIDPKGLDEVADVLIDDGKIAAIGENIE-A---EGAEVIDATGLVVAPGLVDLHVHLREPGQEDKETIETGS   77 (423)
T ss_pred             cEEEEeEEEECCCCCcceeeEEEECCEEEEeeCCCC-C---CCCeEEECCCCEEeCCEEecccccCCCCccccccHHHHH
Confidence            58999999998754 457999999999999986421 1   246799999999999999999999887767788999999


Q ss_pred             HHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC-ChhhHHHHHHHHHcCCcEEEEeecCCC
Q 015826          123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPSG  201 (399)
Q Consensus       123 ~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik~~~~~~~  201 (399)
                      +.++++||||+++|+ ++.|.....+.++...+.+...+..++..++.+... ..+..+++.++.+.|+..++.+     
T Consensus        78 ~~a~~~GvTt~~d~~-~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~~~~~~-----  151 (423)
T PRK09357         78 RAAAAGGFTTVVAMP-NTKPVIDTPEVVEYVLDRAKEAGLVDVLPVGAITKGLAGEELTEFGALKEAGVVAFSDD-----  151 (423)
T ss_pred             HHHHhCCCeEEEecC-CCCCCCCcHHHHHHHHHHhccCCcccEEEEEEEEeCCCCccHHHHHHHHhCCcEEEECC-----
Confidence            999999999999999 666777777788877777766677788777655322 2234667777777787666532     


Q ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhcc
Q 015826          202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT  281 (399)
Q Consensus       202 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~  281 (399)
                        ..+..+++.++++++.|+++|+++++|+++.......+.+.    +......++..+|..+|..++.+++.+|+++  
T Consensus       152 --~~~~~~~~~l~~~~~~a~~~g~~v~iH~ee~~~~~~~~~~~----g~~~~~~~~~~~p~~~E~~~i~~~~~la~~~--  223 (423)
T PRK09357        152 --GIPVQDARLMRRALEYAKALDLLIAQHCEDPSLTEGGVMNE----GEVSARLGLPGIPAVAEEVMIARDVLLAEAT--  223 (423)
T ss_pred             --CcccCCHHHHHHHHHHHHhcCCEEEEeCCCHHHhhcccccC----ChhhHHhCCCCCCHHHHHHHHHHHHHHHHHH--
Confidence              12346889999999999999999999999877644333322    2233445678899999999999999999976  


Q ss_pred             CCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCC
Q 015826          282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGH  361 (399)
Q Consensus       282 ~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~  361 (399)
                           |+++|++|+++. +++++++.++++|+.|++|+|||||+++++++..+++.+|++||||+++++++||+++++|.
T Consensus       224 -----g~~~hi~H~s~~-~~~~~i~~a~~~g~~v~~e~~ph~L~~~~~~~~~~~~~~k~~Pplr~~~~~~~l~~~l~~G~  297 (423)
T PRK09357        224 -----GARVHICHVSTA-GSVELIRWAKALGIKVTAEVTPHHLLLTDEDLLTYDPNYKVNPPLRTEEDREALIEGLKDGT  297 (423)
T ss_pred             -----CCcEEEEeCCCH-HHHHHHHHHHHcCCCEEEEechHHheEcHHHHhCcCCceEECCCCCCHHHHHHHHHHHHcCC
Confidence                 899999999999 99999999999999999999999999999988777889999999999999999999999999


Q ss_pred             ccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          362 IDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       362 id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +++++|||+||+.++|..   +|+++|+|++|+|+.+
T Consensus       298 ~~~i~sDh~p~~~~~k~~---~~~~~~~G~~g~e~~~  331 (423)
T PRK09357        298 IDAIATDHAPHAREEKEC---EFEAAPFGITGLETAL  331 (423)
T ss_pred             CeEEecCCCCCChHHccC---CHhhCCCCceEHHHHH
Confidence            999999999999888863   6999999999999864

>TIGR02033 D-hydantoinase D-hydantoinase

Probab=100.00  E-value=3.1e-52  Score=414.56  Aligned_cols=338  Identities=28%  Similarity=0.400  Sum_probs=272.0

Q ss_pred             EEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC--CCCCcCchHHHH
Q 015826           45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPSGT  122 (399)
Q Consensus        45 ~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~--~~~~~e~~~~~~  122 (399)
                      ++|+|++|+++++..+++|+|+||+|++|++....+   ++.++||++|++|||||||+|+|+.++  +..+.++++.++
T Consensus         1 ~li~n~~vv~~~~~~~~~V~I~dg~I~~Ig~~~~~~---~~~~vIDa~G~~vlPGlID~H~H~~~~~~~~~~~e~~~~~s   77 (454)
T TIGR02033         1 KLIRGGTVVNADDVFQADVLIEGGKIVAVGRNLSPP---DAVEEIDATGKYVMPGGIDVHTHLEMPFGGTVTADDFFTGT   77 (454)
T ss_pred             CEEECcEEEcCCCceEEEEEEECCEEEEecCCCCCC---CCCcEEECCCCEEecCEecceeccCcccCCCCCcchHHHHH
Confidence            479999999988777899999999999998753221   245799999999999999999999876  355678899999


Q ss_pred             HHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHH-HHHHHHcCCcEEEEeecCCC
Q 015826          123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASA-LEALLNAGVLGLKSFMCPSG  201 (399)
Q Consensus       123 ~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~l~~~G~~~ik~~~~~~~  201 (399)
                      ++++++||||++||+ ++.|.....+.++...+.......++++.+........+..++ ++.+.+.|+..+|.++.++.
T Consensus        78 ~~a~~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~~~~  156 (454)
T TIGR02033        78 KAAAAGGTTTIIDFA-LPHKGESLTEALETWHEKAEGKSVIDYGFHMMITHWNDEVLEEHIPELVEEGITSFKVFMAYKN  156 (454)
T ss_pred             HHHHhCCCCEEEeCc-CCCCCCCHHHHHHHHHHHhccCceEEEEEEecccCCcHHHHHHHHHHHHhcCCcEEEEEeecCC
Confidence            999999999999998 5555445566777666665555677777665432223333344 55556689999999886642


Q ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhcc
Q 015826          202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT  281 (399)
Q Consensus       202 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~  281 (399)
                         .+.+++++++++++.|+++|+++++|+|+........++.. ..+......|...+|+.+|..++.+++.+++.+  
T Consensus       157 ---~~~~~~~~l~~~~~~a~~~~~~v~~H~E~~~~~~~~~~~~~-~~G~~~~~~~~~~~p~~~e~~~v~~~~~~~~~~--  230 (454)
T TIGR02033       157 ---LLMVDDEELFEILKRAKELGALLQVHAENGDVIAELQARLL-AQGKTGPEYHALSRPPESEAEAVARAIALAALA--  230 (454)
T ss_pred             ---CCCCCHHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHHHH-HcCCCChhHhhhcCCHHHHHHHHHHHHHHHHHh--
Confidence               24579999999999999999999999988776543333211 112233345667899999999999999999875  


Q ss_pred             CCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC---CCcceEEcCCCCChhhHHHHHHHHh
Q 015826          282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALM  358 (399)
Q Consensus       282 ~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~---~~~~~~~~Pplr~~~~~~~l~~~l~  358 (399)
                           ++++|++|+|++ ++++.|+.+|+.|++|+||+|||||+++.+++..   ++..+|++||||++++|++||++++
T Consensus       231 -----~~~~~i~H~s~~-~~~~~i~~~~~~g~~vt~e~~p~~l~~~~~~~~~~~~~~~~~~~~pPlr~~~~~~~l~~~l~  304 (454)
T TIGR02033       231 -----NAPLYVVHVSTA-SAVDEIAEAREKGQPVYGETCPQYLLLDDTIYDKPGFEGAKYVCSPPLREKEDQDALWSALS  304 (454)
T ss_pred             -----CCCEEEEECCCH-HHHHHHHHHHHCCCeEEEEcCchheeecHHHhcCcccccceeEECCCCCChhhHHHHHHHhh
Confidence                 899999999998 8999999999999999999999999999988753   5678999999999999999999999


Q ss_pred             cCCccEEeCCCCCCCccccc-CCcCCcccccCCcchhcccc
Q 015826          359 DGHIDMLSSDHSPTVPELKL-LDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       359 ~G~id~i~sdh~p~~~~~k~-~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +|.+|+|+|||+||+.++|+ .++++|+.+|+|++|+|+.+
T Consensus       305 ~G~i~~igtDh~p~~~~~k~~~~~~~~~~~~~G~~g~e~~l  345 (454)
T TIGR02033       305 SGALQTVGSDHCPFNFAQKKAIGKDDFTKIPNGGPGVEERM  345 (454)
T ss_pred             cCCeEEEECCCCCCCHHHhhhcccCCHhhCCCCCchHHhHH
Confidence            99999999999999987772 22357999999999999864

This model represents the D-hydantoinase (dihydropyrimidinase) which primarily converts 5,6-dihydrouracil to 3-ureidopropanoate but also acts on dihydrothymine and hydantoin. The enzyme is a metalloenzyme.

>PRK09236 dihydroorotase; Reviewed

Probab=100.00  E-value=2.4e-51  Score=405.17  Aligned_cols=335  Identities=27%  Similarity=0.403  Sum_probs=273.4

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHH
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG  121 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~  121 (399)
                      |++++|+|++|+++++..+++|+|+||+|++|++.....   ++.++||++|++|+|||||+|+|+..++....+++.+.
T Consensus         1 ~~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~---~~~~~id~~g~~v~PG~ID~HvH~~~~~~~~~e~~~~~   77 (444)
T PRK09236          1 MKRILIKNARIVNEGKIFEGDVLIENGRIAKIASSISAK---SADTVIDAAGRYLLPGMIDDQVHFREPGLTHKGDIASE   77 (444)
T ss_pred             CccEEEECCEEEcCCCceEeEEEEECCEEEEecCCCCCC---CCCeEEECCCCEECCCEEEcccccccCcccccccHHHH
Confidence            457899999999987767899999999999998653211   24589999999999999999999988777667888899


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCC
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG  201 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~  201 (399)
                      +++++++||||++||+ ++.|...+.+.+....+.+.....++++++.+....   ..+++.++.+.|+.++|.|+....
T Consensus        78 ~~aa~~~GvTtv~d~p-~~~p~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~---~~~e~~~l~~~g~~g~k~~~~~~~  153 (444)
T PRK09236         78 SRAAVAGGITSFMEMP-NTNPPTTTLEALEAKYQIAAQRSLANYSFYFGATND---NLDEIKRLDPKRVCGVKVFMGAST  153 (444)
T ss_pred             HHHHHhCCcEEEEeCC-CCCCCcCcHHHHHHHHHHhccCeEEEEEEEeccCcc---cHHHHHHHHHccCcEEEEEeccCC
Confidence            9999999999999999 777777778888887777766778899887654322   367788888889999999875421


Q ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCC-chhhhcCCCCCChHHHHHHHHHHHHHHhhhc
Q 015826          202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLD-TRSYSTYLKTRPPSWEEAAIRELLTVAKDTR  280 (399)
Q Consensus       202 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~  280 (399)
                       ......+.+.++++++   ..|+++.+|+|+.+.+...........+ ...+..+...||..+|..++.+++++++++ 
T Consensus       154 -~~~~~~~~~~~~~~~~---~~~~~v~~H~e~~~~~~~~~~~~~~~~g~~~~~~~~~~~rp~~ae~~av~~~~~la~~~-  228 (444)
T PRK09236        154 -GNMLVDNPETLERIFR---DAPTLIATHCEDTPTIKANLAKYKEKYGDDIPAEMHPLIRSAEACYKSSSLAVSLAKKH-  228 (444)
T ss_pred             -CCcccCcHHHHHHHHH---hcCCEEEEecCCHHHHHHHHHHHHHhcCCCCChhhccccCCHHHHHHHHHHHHHHHHHH-
Confidence             1112234556666654   4589999999998775422221100101 123345566899999999999999999976 


Q ss_pred             cCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcC
Q 015826          281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG  360 (399)
Q Consensus       281 ~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G  360 (399)
                            ++++|+.|++++ ++++++++++.+|.+++||+|||||+++++++...++.++++||||+++++++||+++++|
T Consensus       229 ------~~~~hi~h~st~-~~~~~i~~~~~~g~~vt~e~~~H~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G  301 (444)
T PRK09236        229 ------GTRLHVLHISTA-KELSLFENGPLAEKRITAEVCVHHLWFDDSDYARLGNLIKCNPAIKTASDREALRQALADD  301 (444)
T ss_pred             ------CCCEEEEeCCCH-HHHHHHHHHHHCCCCEEEEEchhhhhcCHHHHhccCceEEECCCCCCHHHHHHHHHHHhCC
Confidence                  899999999999 9999999999999999999999999999998877788999999999999999999999999


Q ss_pred             CccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       361 ~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      .+|+|+|||+||..++|..   +|+++++|++|+|+++
T Consensus       302 ~i~~igtDh~p~~~~~k~~---~~~~~~~G~~~~e~~l  336 (444)
T PRK09236        302 RIDVIATDHAPHTWEEKQG---PYFQAPSGLPLVQHAL  336 (444)
T ss_pred             CCcEEECCCCCCCHHHhcC---CcccCCCCcccHHHHH
Confidence            9999999999999888864   7999999999999863

>PRK04250 dihydroorotase; Provisional

Probab=100.00  E-value=6.6e-51  Score=394.45  Aligned_cols=293  Identities=30%  Similarity=0.443  Sum_probs=237.0

Q ss_pred             EccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHHHHHc
Q 015826           48 TSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAA  127 (399)
Q Consensus        48 ~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~  127 (399)
                      .+++|+++.+..+++|+|+||+|++|++. ..    ++.++||++|++|+|||||+|+|+..++...++++.+.++++++
T Consensus         2 ~~~~v~~~~~~~~~~i~i~~G~I~~i~~~-~~----~~~~~iD~~g~~v~PG~ID~HvH~~~~~~~~~e~~~~~~~aa~~   76 (398)
T PRK04250          2 LEGKFLLKGRIVEGGIGIENGRISKISLR-DL----KGKEVIKVKGGIILPGLIDVHVHLRDFEESYKETIESGTKAALH   76 (398)
T ss_pred             eeEEEEECCcEEEEEEEEECCEEEEeeCC-CC----CCCeEEECCCCEEccCEEeccccccCCCCCcHHHHHHHHHHHHh
Confidence            36788887777789999999999999741 11    24579999999999999999999987776677889999999999


Q ss_pred             CCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCC
Q 015826          128 GGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPM  207 (399)
Q Consensus       128 ~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~  207 (399)
                      +||||+++|+ ++.|...+.+.+..+.+.+...+.+||+++. ....+   .+++.++..   ..+|.|+.+..  +  .
T Consensus        77 gGvTtv~~~p-~~~p~~~~~~~~~~~~~~~~~~~~vd~~~~~-~~~~~---~~~l~~l~~---~~~k~f~~~~~--~--~  144 (398)
T PRK04250         77 GGITLVFDMP-NTKPPIMDEKTYEKRMRIAEKKSYADYALNF-LIAGN---CEKAEEIKA---DFYKIFMGAST--G--G  144 (398)
T ss_pred             CCeEEEEECC-CCCCCCCcHHHHHHHHHHhCcCceeeEEEEE-ecCCC---HHHHHHHHh---hheEEEEecCC--C--c
Confidence            9999999999 7778888899999988888888899999887 44332   344555532   24677764421  1  1


Q ss_pred             CCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCC
Q 015826          208 TNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEG  287 (399)
Q Consensus       208 ~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g  287 (399)
                      ...+.+...  .+ +.+..+.+|+|+.+.+.                 .+.+||+.+|..++.+++.+++++       |
T Consensus       145 ~~~~~~~~~--~~-~~~~~v~~H~E~~~~~~-----------------~~~~~p~~aE~~av~r~~~la~~~-------~  197 (398)
T PRK04250        145 IFSENFEVD--YA-CAPGIVSVHAEDPELIR-----------------EFPERPPEAEVVAIERALEAGKKL-------K  197 (398)
T ss_pred             hhHHHHHHH--HH-hcCCeEEEEecChhhhh-----------------cccCCCHHHHHHHHHHHHHHHHHh-------C
Confidence            222223221  23 34667999999987532                 235789999999999999999986       9


Q ss_pred             ceEEEEcCCChhHHHHHHHHHHHCCCC-EEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEe
Q 015826          288 AHLHIVHLSDASSSLDLLMEAKTNGDS-ITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLS  366 (399)
Q Consensus       288 ~~vhi~H~s~~~~~l~~i~~ak~~G~~-vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~  366 (399)
                      +++||+|+|++ +++++|++   +|++ ||||||||||+|+++++ .+++++||+||||+++||++||++|.  .||+|+
T Consensus       198 ~~lhi~HvSt~-~~~~~i~~---~g~~~vt~Ev~ph~L~l~~~~~-~~~~~~k~~PPLR~~~d~~aL~~~l~--~Id~i~  270 (398)
T PRK04250        198 KPLHICHISTK-DGLKLILK---SNLPWVSFEVTPHHLFLTRKDY-ERNPLLKVYPPLRSEEDRKALWENFS--KIPIIA  270 (398)
T ss_pred             CCEEEEeCCCH-HHHHHHHH---cCCCcEEEEeCHHHhccCHHHH-CCCCceEEcCCCCCHHHHHHHHHhhc--cCCEEE
Confidence            99999999999 99999954   4887 99999999999999988 47889999999999999999999996  499999


Q ss_pred             CCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          367 SDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       367 sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      |||+||+.++|+       .+++|++|+|+++
T Consensus       271 sDHaP~~~~~k~-------~~~~G~~g~e~~l  295 (398)
T PRK04250        271 SDHAPHTLEDKE-------AGAAGIPGLETEV  295 (398)
T ss_pred             cCCcccCHHHhh-------cCCCCcchHHHHH
Confidence            999999988884       2579999999875

>cd01318 DHOase_IIb Dihydroorotase (DHOase), subgroup IIb; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis

Probab=100.00  E-value=3.7e-50  Score=385.06  Aligned_cols=275  Identities=35%  Similarity=0.492  Sum_probs=237.7

Q ss_pred             CCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeee
Q 015826           93 EAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV  172 (399)
Q Consensus        93 G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (399)
                      |++|+||+||+|+|+++++...+|++.+++++|++|||||+++|| ++.|...+.+.++...+.++..+.++|++++++.
T Consensus         1 G~~vlPG~iD~HvH~r~pg~~~~ed~~s~t~aA~~GGvTtv~~mP-nt~P~~~~~~~~~~~~~~a~~~~~vd~~~~~~~~   79 (361)
T cd01318           1 GLLILPGVIDIHVHFREPGLTYKEDFVSGSRAAAAGGVTTVMDMP-NTKPPTTTAEALYEKLRLAAAKSVVDYGLYFGVT   79 (361)
T ss_pred             CCEEecCeeEeeecCCCCCCCccCcHHHHHHHHHcCCCEEEEECC-CCCCCCCcHHHHHHHHHHhccCceeEEEEEEeec
Confidence            789999999999999999999999999999999999999999999 8888888999999988888777889999988764


Q ss_pred             CCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchh
Q 015826          173 PENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS  252 (399)
Q Consensus       173 ~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~  252 (399)
                      ..     +++.++.+.|+.++|.|+.+.. +.. ..++..|.+++++++   .++.+|+|+.+.+.....+.+      .
T Consensus        80 ~~-----~~l~~~~~~~~~g~k~f~~~~~-~~~-~~~~~~l~~~~~~~~---~~v~~H~E~~~l~~~~~~~~~------~  143 (361)
T cd01318          80 GS-----EDLEELDKAPPAGYKIFMGDST-GDL-LDDEETLERIFAEGS---VLVTFHAEDEDRLRENRKELK------G  143 (361)
T ss_pred             Ch-----hhHHHHHHhhCcEEEEEEecCC-CCc-CCCHHHHHHHHHhcC---CeEEEeCCChHHHHHHHhhhh------h
Confidence            33     3566666778889999875421 112 257889999998875   789999999987664444322      1


Q ss_pred             hhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCC
Q 015826          253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP  332 (399)
Q Consensus       253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~  332 (399)
                      ...++.+||+.+|..++.+++.+++++       |+++||+|+|+. +++++|+++|   .+|+||+|||||+|+++++.
T Consensus       144 ~~~~~~~~P~~aE~~av~r~~~la~~~-------~~~~hi~Hvs~~-~~~~~i~~~k---~~vt~ev~ph~L~l~~~~~~  212 (361)
T cd01318         144 ESAHPRIRDAEAAAVATARALKLARRH-------GARLHICHVSTP-EELKLIKKAK---PGVTVEVTPHHLFLDVEDYD  212 (361)
T ss_pred             ccCCCCcCCHHHHHHHHHHHHHHHHHH-------CCCEEEEeCCCH-HHHHHHHHhC---CCeEEEeCHHHhhcCHHHHh
Confidence            124678999999999999999999976       899999999999 9999999988   68999999999999998877


Q ss_pred             CCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          333 DGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       333 ~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      ..|+++|++||||+++||++||+++++|+||+++|||+||..++|..   +|+.+++|++|+|+++
T Consensus       213 ~~~~~~k~~PPlr~~~d~~aL~~~l~~G~id~i~SDh~P~~~~~k~~---~~~~a~~G~~g~e~~l  275 (361)
T cd01318         213 RLGTLGKVNPPLRSREDRKALLQALADGRIDVIASDHAPHTLEEKRK---GYPAAPSGIPGVETAL  275 (361)
T ss_pred             cCCCeEEEeCCCCCHHHHHHHHHHHhCCCCCEEeeCCCCCCHHHccC---ChhhCCCCCccHHHHH
Confidence            67889999999999999999999999999999999999999888863   6999999999999853

This group contains the archeal members of the DHOase family.

>PRK00369 pyrC dihydroorotase; Provisional

Probab=100.00  E-value=3.1e-49  Score=380.53  Aligned_cols=273  Identities=28%  Similarity=0.357  Sum_probs=221.2

Q ss_pred             eeEEEEECCEEEEeccCCCCCCCCCCCcEEeC-CCCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcC
Q 015826           60 SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDY-GEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPL  138 (399)
Q Consensus        60 ~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~-~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~  138 (399)
                      +..|.|++|+|..|++..  +   .+.++||+ +|++|+|||||+|+|++.++...++++.+++++|++|||||+++|| 
T Consensus        13 ~~~~~~~~~~~~~i~~~~--~---~~~~~id~~~G~~vlPG~ID~HvH~r~pg~~~~ed~~sgs~AAa~GGvTtv~~mP-   86 (392)
T PRK00369         13 KEIKEICINFDRRIKEIK--S---RCKPDLDLPQGTLILPGAIDLHVHLRGLKLSYKEDVASGTSEAAYGGVTLVADMP-   86 (392)
T ss_pred             CceEEEeeeeeeeEeecc--C---CCCceeecCCCCEEeCCEEEcccccCCCCCcccccHHHHHHHHHhCCcEEEEECC-
Confidence            356788889998887652  1   25679999 6999999999999999999999999999999999999999999999 


Q ss_pred             CCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHH
Q 015826          139 NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLS  218 (399)
Q Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~  218 (399)
                      ++.|...+.+.++.+.+.+...+.+||+++.+....    .+++.   +.|+.++|.|..     +  ..+.+.    ++
T Consensus        87 nt~P~~~~~~~l~~~~~~a~~~~~vd~~~~~~~~~~----~~el~---~~~~~g~k~f~~-----~--~~~~~~----~~  148 (392)
T PRK00369         87 NTIPPLNTPEAITEKLAELEYYSRVDYFVYSGVTKD----PEKVD---KLPIAGYKIFPE-----D--LEREET----FR  148 (392)
T ss_pred             CCCCCCChHHHHHHHHHHhCcCCeEEEEEEeeccCC----HHHHH---HhhCceEEEECC-----C--CchHHH----HH
Confidence            788888889999999988888889999998765321    22343   347788888741     1  123333    34


Q ss_pred             HHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh
Q 015826          219 VLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA  298 (399)
Q Consensus       219 ~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~  298 (399)
                      .+.+++.++.+|||+.+.+...               ....+|..+|..++.++..+            +++||+|+|++
T Consensus       149 ~~~~~~~~v~~HaE~~~l~~~~---------------~~~~rp~~aE~~ai~~~~~~------------~~lhi~HvSt~  201 (392)
T PRK00369        149 VLLKSRKLKILHPEVPLALKSN---------------RKLRRNCWYEIAALYYVKDY------------QNVHITHASNP  201 (392)
T ss_pred             HHHHhCCEEEEeCCCHHHhhcc---------------hhcccCHHHHHHHHHHHHHh------------CCEEEEECCCH
Confidence            4455669999999998764311               11358888998887776655            35999999998


Q ss_pred             hHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCccccc
Q 015826          299 SSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKL  378 (399)
Q Consensus       299 ~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~  378 (399)
                       +++   +.+|++|  ++||||||||+|+++    .++.+||+||||+++||++||++|++  ||+|+|||+||+.++|.
T Consensus       202 -~~v---~~ak~~g--vt~Ev~pHhL~l~~~----~~~~~k~~PPLR~~~dr~aL~~~l~~--id~i~SDHaP~~~~~K~  269 (392)
T PRK00369        202 -RTV---RLAKELG--FTVDITPHHLLVNGE----KDCLTKVNPPIRDINERLWLLQALSE--VDAIASDHAPHSSFEKL  269 (392)
T ss_pred             -HHH---HHHHHCC--CeEEechhHheeccC----CCCceEEeCCCCCHHHHHHHHHHHHh--CCEEEeCCCCCCHHHcc
Confidence             664   5667777  899999999999986    26789999999999999999999999  99999999999998885


Q ss_pred             CCcCCcccccCCcchhcccc
Q 015826          379 LDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       379 ~~~~~~~~~~~G~~g~e~~l  398 (399)
                         .+|+++|+|++|+|+++
T Consensus       270 ---~~f~~~~~Gi~GlE~~l  286 (392)
T PRK00369        270 ---QPYEVCPPGIAALSFTP  286 (392)
T ss_pred             ---CCHhhCCCCCeeHHHHH
Confidence               37999999999999965

>cd01302 Cyclic_amidohydrolases Cyclic amidohydrolases, including hydantoinase, dihydropyrimidinase, allantoinase, and dihydroorotase, are involved in the metabolism of pyrimidines and purines, sharing the property of hydrolyzing the cyclic amide bond of each substrate to the corresponding N-carbamyl amino acids

Probab=100.00  E-value=8.4e-49  Score=373.34  Aligned_cols=254  Identities=37%  Similarity=0.600  Sum_probs=223.5

Q ss_pred             CEEecceeecccccCCCCCC-CcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeee
Q 015826           94 AVIMPGLIDVHAHLDDPGRT-EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV  172 (399)
Q Consensus        94 ~~vlPGlID~H~H~~~~~~~-~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (399)
                      ++|+||+||+|+|+++++.. .++++.+++++|++|||||+++|| ++.|...+.+.++...+.+...+.+||+++++..
T Consensus         1 ~~vlPG~iD~HvH~r~pg~~~~~e~~~t~t~aA~~GG~Ttv~~mp-n~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~   79 (337)
T cd01302           1 LLVLPGFIDIHVHLRDPGGTTYKEDFESGSRAAAAGGVTTVIDMP-NTGPPPIDLPAIELKIKLAEESSYVDFSFHAGIG   79 (337)
T ss_pred             CEecCCeeEeeeccCCCCCCCchhHHHHHHHHHHhCCCcEEEECC-CCCCCCCcHHHHHHHHHHhCcCcEeeEEEEEecc
Confidence            57999999999999999877 889999999999999999999999 7888888889998888888777889999987765


Q ss_pred             CCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchh
Q 015826          173 PENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS  252 (399)
Q Consensus       173 ~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~  252 (399)
                      .+  +..+++.++.+.|+.++|+|+.+... ..+..+++.+.++++.++++|+++.+|+|                    
T Consensus        80 ~~--~~~~el~~l~~~Gv~g~K~f~~~~~~-~~~~~~~~~l~~~~~~~~~~g~~v~~H~E--------------------  136 (337)
T cd01302          80 PG--DVTDELKKLFDAGINSLKVFMNYYFG-ELFDVDDGTLMRTFLEIASRGGPVMVHAE--------------------  136 (337)
T ss_pred             Cc--cCHHHHHHHHHcCCcEEEEEEeccCC-CccccCHHHHHHHHHHHHhcCCeEEEeHH--------------------
Confidence            53  25678888888999999999865321 12256889999999999999999999996                    


Q ss_pred             hhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCC
Q 015826          253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP  332 (399)
Q Consensus       253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~  332 (399)
                                        +++.+++++       |+++||+|+|+. +++++|+++|++|++||||+|||||+|+++++.
T Consensus       137 ------------------r~~~la~~~-------g~~l~i~Hiss~-~~le~i~~ak~~g~~vt~ev~ph~L~l~~~~~~  190 (337)
T cd01302         137 ------------------RAAQLAEEA-------GANVHIAHVSSG-EALELIKFAKNKGVKVTCEVCPHHLFLDESMLR  190 (337)
T ss_pred             ------------------HHHHHHHHh-------CCcEEEEeCCCH-HHHHHHHHHHHCCCcEEEEcChhhheeCHHHhh
Confidence                              234566654       899999999999 999999999999999999999999999998887


Q ss_pred             CCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          333 DGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       333 ~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      .+++++|++||||++++|++||+++++|+||+|+|||+||+.++|..+ .+|+++|+|++|+|+++
T Consensus       191 ~~~~~~k~~Pplr~~~~~~~L~~~l~~G~id~i~sDh~p~~~~~k~~~-~~~~~a~~G~~g~e~~l  255 (337)
T cd01302         191 LNGAWGKVNPPLRSKEDREALWEGVKNGKIDTIASDHAPHSKEEKESG-KDIWKAPPGFPGLETRL  255 (337)
T ss_pred             CCCceEEEeCCCCCHHHHHHHHHHHhCCCCCEEecCCCCCCHHHhccC-CCcccCCCCcccHHHHH
Confidence            778899999999999999999999999999999999999998888643 47999999999999864

Allantoinases catalyze the degradation of purines, while dihydropyrimidinases and hydantoinases, a microbial counterpart of dihydropyrimidinase, are involved in pyrimidine degradation. Dihydroorotase participates in the de novo synthesis of pyrimidines.

>cd01317 DHOase_IIa Dihydroorotase (DHOase), subgroup IIa; DHOases catalyze the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in pyrimidine biosynthesis

Probab=100.00  E-value=2.9e-48  Score=375.41  Aligned_cols=290  Identities=35%  Similarity=0.479  Sum_probs=253.6

Q ss_pred             CcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeE
Q 015826           86 GQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV  165 (399)
Q Consensus        86 ~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (399)
                      .++||++|++|+||+||+|+|++.++...++++.+.+++|+.+||||+++|+ ++.|...+.+.++.+.+.+.....+++
T Consensus         2 ~~~iD~~g~~vlPG~iD~HvH~~~~~~~~~e~~~s~s~aA~~GGvTtii~~p-~~~p~~~~~~~~~~~~~~~~~~~~~~~   80 (374)
T cd01317           2 AEVIDAEGKILAPGLVDLHVHLREPGFEYKETLESGAKAAAAGGFTTVVCMP-NTNPVIDNPAVVELLKNRAKDVGIVRV   80 (374)
T ss_pred             CeEEECCCCEEecCEEeeccccCCCCccccchHHHHHHHHHhCCCcEEEECC-CCCCCCCCHHHHHHHHHHhccCCceeE
Confidence            4689999999999999999999998887889999999999999999999999 777888888999888888777677788


Q ss_pred             EeeeeeeCCCh-hhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhc
Q 015826          166 GFWGGLVPENA-YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE  244 (399)
Q Consensus       166 ~~~~~~~~~~~-~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~  244 (399)
                      .+++++..... +.++++.++.+.|+.+||.+       +++..+...+.++++.++++|.++.+|+|+.+.+....++.
T Consensus        81 ~~~~~~~~~~~~~~~~~i~~l~~~G~~~~k~~-------~~~~~~~~~l~~~~~~~~~~g~~v~~H~E~~~~~~~~~~~~  153 (374)
T cd01317          81 LPIGALTKGLKGEELTEIGELLEAGAVGFSDD-------GKPIQDAELLRRALEYAAMLDLPIIVHPEDPSLAGGGVMNE  153 (374)
T ss_pred             EEEEEEeeCCCcccHHHHHHHHHCCcEEEEcC-------CcCCCCHHHHHHHHHHHHhcCCeEEEecCChhhhhccCccC
Confidence            77777655432 24778888888999999853       12346888999999999999999999999988765444332


Q ss_pred             cCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEcccccc
Q 015826          245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYL  324 (399)
Q Consensus       245 ~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L  324 (399)
                          +......++..+|..+|..++.+++.+++++       ++++|+.|+|+. ++++.++++|++|+.+++++|||||
T Consensus       154 ----g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~-------~~~i~i~h~ss~-~~l~~i~~~~~~G~~~~~e~~~h~L  221 (374)
T cd01317         154 ----GKVASRLGLPGIPPEAETIMVARDLELAEAT-------GARVHFQHLSTA-RSLELIRKAKAKGLPVTAEVTPHHL  221 (374)
T ss_pred             ----ChhhHHhCCCCCCHHHHHHHHHHHHHHHHHh-------CCcEEEEeCCCH-HHHHHHHHHHHCCCCEEEEecHHHH
Confidence                3445667778999999999999999999986       899999999998 9999999999999999999999999


Q ss_pred             ccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          325 AFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       325 ~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +++++++...++++|++||||+++++++||+++++|.+++|+|||+||+.++|..   +|+.+++|++|+|+.+
T Consensus       222 ~ld~~~~~~~~~~~k~~Pplr~~~~~~~l~~~~~~G~i~~igsDh~p~~~~~k~~---~~~~~~~Gi~g~e~~l  292 (374)
T cd01317         222 LLDDEALESYDTNAKVNPPLRSEEDREALIEALKDGTIDAIASDHAPHTDEEKDL---PFAEAPPGIIGLETAL  292 (374)
T ss_pred             hcCHHHHhccCCceEEcCCCCCHHHHHHHHHHHhcCCceEEEcCCCCCCHHHccC---CHhhCCCcHhHHHHHH
Confidence            9999988777889999999999999999999999999999999999999888854   6999999999999864

This subgroup also contains proteins that lack the active site, like unc-33, a C.elegans protein involved in axon growth.

>cd01316 CAD_DHOase The eukaryotic CAD protein is a trifunctional enzyme of carbamoylphosphate synthetase-aspartate transcarbamoylase-dihydroorotase, which catalyzes the first three steps of de novo pyrimidine nucleotide biosynthesis

Probab=100.00  E-value=3e-45  Score=347.29  Aligned_cols=248  Identities=31%  Similarity=0.488  Sum_probs=200.5

Q ss_pred             CEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeC
Q 015826           94 AVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP  173 (399)
Q Consensus        94 ~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (399)
                      .+|+||+||+|+|+++++..+++++.+++++|++||||||+||| ++.|...+.+.++.+.+.+...+.+||+++++...
T Consensus         2 ~~vlPG~ID~HvH~r~pg~~~~ed~~sgs~AAa~GGvTtv~dmP-nt~P~~~~~~~~~~~~~~a~~~s~vd~~~~~~~~~   80 (344)
T cd01316           2 TIRLPGLIDVHVHLREPGATHKEDFASGTKAALAGGFTMVRAMP-NTNPSIVDVASLKLVQSLAQAKARCDYAFSIGATS   80 (344)
T ss_pred             eEEeCCeEEeeeccCCCCcCCcChHHHHHHHHHhCCCeEEEECC-CCCCCCCCHHHHHHHHHHhccCcEEeEEEEeeecC
Confidence            47999999999999999998999999999999999999999999 77888888999999988888778999999977655


Q ss_pred             CChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhh
Q 015826          174 ENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSY  253 (399)
Q Consensus       174 ~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~  253 (399)
                      .+.   +++.++.. ++.++|.|+.+.. .... .++.........+...+.++.+|+++.                   
T Consensus        81 ~~~---~~~~~l~~-~~~g~k~f~~~~~-~~~~-~~~~~~~~~~~~~~~~~~p~~~~~e~~-------------------  135 (344)
T cd01316          81 TNA---ATVGELAS-EAVGLKFYLNETF-STLI-LDKITAWASHFNAWPSTKPIVTHAKSQ-------------------  135 (344)
T ss_pred             CCH---HHHHHHHh-ccCeEEEEECCCC-CCCc-cchHHHHHHHHHhcccCCCeEEehhhH-------------------
Confidence            443   33444433 3578888875421 1111 222222223334444577777777542                   


Q ss_pred             hcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC
Q 015826          254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD  333 (399)
Q Consensus       254 ~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~  333 (399)
                                    .+.+++.+++.+       |+++||+|+|++ +++++|+++|++|++||||||||||+++++++..
T Consensus       136 --------------~~~~~l~la~~~-------g~~lhi~HiSt~-~~~~~i~~ak~~g~~vt~ev~phhL~l~~~~~~~  193 (344)
T cd01316         136 --------------TLAAVLLLASLH-------NRSIHICHVSSK-EEINLIRLAKARGLKVTCEVSPHHLFLSQDDLPR  193 (344)
T ss_pred             --------------HHHHHHHHHHHH-------CCCEEEEeCCCH-HHHHHHHHHHHCCCcEEEEechHHeeccHHHhhc
Confidence                          456678888875       999999999999 9999999999999999999999999999988754


Q ss_pred             CCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          334 GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       334 ~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                        +.+|++||||+++||++||++|.  .||+|+|||+||+.++|..   +  ++|+|++|+|++|
T Consensus       194 --~~~k~~PPLR~~~dr~aL~~~l~--~id~i~SDHaP~~~~~K~~---~--~a~~G~~g~e~~l  249 (344)
T cd01316         194 --GQYEVRPFLPTREDQEALWENLD--YIDCFATDHAPHTLAEKTG---N--KPPPGFPGVETSL  249 (344)
T ss_pred             --CCceeCCCCcCHHHHHHHHHHHh--cCCEEEcCCCCCCHHHhcC---C--CCCCCcccHHHHH
Confidence              58999999999999999999995  6999999999999888852   2  7899999999975

Dihydroorotase (DHOase) catalyzes the third step, the reversible interconversion of carbamoyl aspartate to dihydroorotate.

>cd01294 DHOase Dihydroorotase (DHOase) catalyzes the reversible interconversion of carbamoyl aspartate to dihydroorotate, a key reaction in the pyrimidine biosynthesis

Probab=100.00  E-value=8.3e-43  Score=332.48  Aligned_cols=245  Identities=20%  Similarity=0.233  Sum_probs=193.7

Q ss_pred             EecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC-ceeEEeeeeeeCC
Q 015826           96 IMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YVDVGFWGGLVPE  174 (399)
Q Consensus        96 vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~  174 (399)
                      -+||+||+|+|++.+     +++.+.+++|.++| ||+++|+ ++.|...+.+.+..+........ ..++.+++++...
T Consensus         2 ~~Pg~iD~h~h~~~~-----~~~~~~~~aa~~gG-Ttvv~mp-nt~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   74 (335)
T cd01294           2 TIPRPDDMHLHLRDG-----AMLKLVLPYTARGF-SRAIVMP-NLKPPVTTTADALAYRERILAADPGPNFTPLMTLYLT   74 (335)
T ss_pred             cCCCcceeEecCCCc-----hHHHHHHHHHHhCC-CEEEECC-CCCCCCCCHHHHHHHHHHHHhcCCCCcEEEEEEEecc
Confidence            379999999999974     78889999999999 9999999 67777666676666665555444 4566665555222


Q ss_pred             ChhhHHHHHHHHHc-CCcEEEEeecCCCC-CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchh
Q 015826          175 NAYNASALEALLNA-GVLGLKSFMCPSGI-NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS  252 (399)
Q Consensus       175 ~~~~~~~l~~l~~~-G~~~ik~~~~~~~~-~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~  252 (399)
                      .....++++++.+. |+.++|+|+..... .+....+.+.+..+++.++++|++|.+|+++.....              
T Consensus        75 ~~~~~~el~~~~~~~G~~g~Klf~~~~~~~~~~~~~d~~~l~~~~e~~~~~g~~V~vHaE~~~l~~--------------  140 (335)
T cd01294          75 ENTTPEELREAKKKGGIRGVKLYPAGATTNSQGGVTDLEKIYPVLEAMQKLGMPLLVHGEVPDFKI--------------  140 (335)
T ss_pred             CCCCHHHHHHHHHhCCceEEEEecCCCccCCCCCcCCHHHHHHHHHHHHHcCCeEEEecCCCcccc--------------
Confidence            22245788888876 99999998642110 011223568999999999999999999999865411              


Q ss_pred             hhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCC
Q 015826          253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP  332 (399)
Q Consensus       253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~  332 (399)
                             .+...|...+.+++.++++.      +++++||+|+|++ +++++|+++|+   +||||||||||+|+++++.
T Consensus       141 -------~~~~~e~~~~~~~~~lA~~~------p~~~v~i~Hvst~-~~~~~i~~ak~---~vt~Et~ph~L~l~~~~~~  203 (335)
T cd01294         141 -------DVLDREAKFIPVLEPLAQRF------PKLKIVLEHITTA-DAVEYVKSCNE---NVAATITPHHLLLTRDDLL  203 (335)
T ss_pred             -------cchhhHHHHHHHHHHHHHHc------CCCeEEEecccHH-HHHHHHHhCCC---CcEEEEchhHheeeHHHhc
Confidence                   01112344567788888862      5899999999999 99999998876   8999999999999998875


Q ss_pred             C--CCcceEEcCCCCChhhHHHHHHHHhcCCcc-EEeCCCCCCCccccc
Q 015826          333 D--GDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKL  378 (399)
Q Consensus       333 ~--~~~~~~~~Pplr~~~~~~~l~~~l~~G~id-~i~sdh~p~~~~~k~  378 (399)
                      .  +|+++||+||||+++||++||++|++|.|| +|+|||+||+.++|+
T Consensus       204 ~~~~g~~~k~~PPlR~~~d~~~L~~~l~~G~id~~i~SDHaP~~~~~K~  252 (335)
T cd01294         204 GGGLNPHLYCKPVAKRPEDREALRKAATSGHPKFFLGSDSAPHPKSNKE  252 (335)
T ss_pred             CCCCCCCeEEcCCCCCHHHHHHHHHHHHcCCCCeEEECCCCCCCCcccc
Confidence            5  588999999999999999999999999999 599999999998885

In contrast to the large polyfunctional CAD proteins of higher organisms, this group of DHOases is monofunctional and mainly dimeric.

>PRK09061 D-glutamate deacylase; Validated

Probab=100.00  E-value=2.8e-39  Score=322.45  Aligned_cols=293  Identities=21%  Similarity=0.227  Sum_probs=226.3

Q ss_pred             CccEEEEccEEEcCCCc--eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchH
Q 015826           42 YNQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP  119 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~  119 (399)
                      +++++|+|++|+++++.  ..++|.|+||+|++|++...     .+.++||++|++|+|||||+|+|...++        
T Consensus        18 ~~~~li~~~~vid~~~~~~~~~~v~I~~G~I~~ig~~~~-----~~~~viD~~g~~v~PG~ID~H~H~~~~~--------   84 (509)
T PRK09061         18 PYDLVIRNGRVVDPETGLDAVRDVGIKGGKIAAVGTAAI-----EGDRTIDATGLVVAPGFIDLHAHGQSVA--------   84 (509)
T ss_pred             cCCEEEECcEEEeCCCCeeccceEEEECCEEEEecCCCC-----CCCeEEeCCCCEEecCeEeeeeCCCCCc--------
Confidence            35789999999998764  35799999999999987431     2567999999999999999999987543        


Q ss_pred             HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh-ccCceeEEeeeeee-------CC-----------------
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE-KRIYVDVGFWGGLV-------PE-----------------  174 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-------~~-----------------  174 (399)
                       ..+.++.+||||++++..+..|.       ..+.+... ....+|++++.+..       .+                 
T Consensus        85 -~~~~~~~~GvTtvv~~~~~~~p~-------~~~~~~~~~~~~~vn~~~~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~  156 (509)
T PRK09061         85 -AYRMQAFDGVTTALELEAGVLPV-------ARWYAEQAGEGRPLNYGASVGWTPARIAVLTGPQAEGTIADFGKALGDP  156 (509)
T ss_pred             -cchhhccCCceeEEeeccCCCCH-------HHHHHHHHhcCCcceeehhcCcHHHHHHHhCCccccccccccccccccc
Confidence             25677899999999984233221       12222222 23346777655432       10                 


Q ss_pred             --C-----hhhHHHHHHHH----HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhh
Q 015826          175 --N-----AYNASALEALL----NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKL  243 (399)
Q Consensus       175 --~-----~~~~~~l~~l~----~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~  243 (399)
                        .     .+.++++++++    +.|+.+++.+..+     .+..+.+++.++++.|+++|.++.+|+++.+..      
T Consensus       157 ~~~~~~~t~~el~~m~~ll~~al~~Ga~gis~~~~y-----~p~~~~~eL~~l~~~A~~~g~~v~~H~e~~~~~------  225 (509)
T PRK09061        157 RWQERAATPAELAEILELLEQGLDEGALGIGIGAGY-----APGTGHKEYLELARLAARAGVPTYTHVRYLSNV------  225 (509)
T ss_pred             ccccCCCCHHHHHHHHHHHHHHHHCCCCEEecCCcc-----CCCCCHHHHHHHHHHHHHcCCEEEEEecCcccC------
Confidence              1     23344555554    5899999875433     234688999999999999999999999876531      


Q ss_pred             ccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCC------hhHHHHHHHHHHHCCCCEEE
Q 015826          244 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD------ASSSLDLLMEAKTNGDSITV  317 (399)
Q Consensus       244 ~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~------~~~~l~~i~~ak~~G~~vt~  317 (399)
                                       .+..|..++.+++++++++       |+|+||+|+++      . +.+++|+++|++|++|++
T Consensus       226 -----------------~~~~e~~av~~~i~lA~~~-------G~rv~IsHlss~g~~~~~-~~le~I~~Ar~~Gi~Vt~  280 (509)
T PRK09061        226 -----------------DPRSSVDAYQELIAAAAET-------GAHMHICHVNSTSLRDID-RCLALVEKAQAQGLDVTT  280 (509)
T ss_pred             -----------------CchhHHHHHHHHHHHHHHh-------CCCEEEEeeccCCcccHH-HHHHHHHHHHHcCCcEEE
Confidence                             1235667899999999976       89999999998      6 889999999999999999


Q ss_pred             Eccccc--------cccccccCCCCCcce---EE---cCCCCC-------------------------hhhHHHHHHHHh
Q 015826          318 ETCPHY--------LAFSAEEIPDGDTRF---KC---APPIRD-------------------------AANKEKLWEALM  358 (399)
Q Consensus       318 e~~p~~--------L~~~~~~~~~~~~~~---~~---~Pplr~-------------------------~~~~~~l~~~l~  358 (399)
                      |+||||        ++++.+.....+..+   ++   +||||+                         +.+++.||++++
T Consensus       281 e~~P~~~~~t~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  360 (509)
T PRK09061        281 EAYPYGAGSTVVGAAFFDPGWLERMGLGYGSLQWVETGERLLTREELAKLRANDPGGLVLIHFLDEDNPRDRALLDRSVL  360 (509)
T ss_pred             EecCcchhhhhhcccccCHHHHHHhCCCHHHheehhcccccCCHHHHHHHhccCCCCeEEEEeccCCCCccchhHHHHhC
Confidence            999999        888655444445455   78   999999                         677999999999


Q ss_pred             cCCccEEeCCCCCCCcccccCCcCCcccccCCcchhc
Q 015826          359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ  395 (399)
Q Consensus       359 ~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e  395 (399)
                      ++.+ +|+|||+||..++|.   .+|.++++|+.|++
T Consensus       361 ~p~~-~i~sD~~p~~~~~~~---~~~~~~~~~~~~~~  393 (509)
T PRK09061        361 FPGA-AIASDAMPWTWSDGT---VYEGDAWPLPEDAV  393 (509)
T ss_pred             CCCc-eEecCCccccccccc---cccccccccccCCC
Confidence            9999 999999999988885   47889999998876

>PLN02599 dihydroorotase

Probab=100.00  E-value=2.6e-39  Score=307.01  Aligned_cols=256  Identities=19%  Similarity=0.203  Sum_probs=202.3

Q ss_pred             EEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc--CceeEEeeeeee
Q 015826           95 VIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLV  172 (399)
Q Consensus        95 ~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  172 (399)
                      +.+|---|+|+|+++.      .+.....-..++|||++++|| |+.|+..+.+.+..+.+.+...  ..+||.+++++.
T Consensus        23 ~~~~~~~d~h~hlr~~------~~~~~~~~~~~gg~t~~i~MP-n~~Ppv~~~~~~~~~~~~~~~~~~~~vdf~~~~~l~   95 (364)
T PLN02599         23 LTITRPDDWHLHLRDG------AKLAAVVPHSARHFGRAIVMP-NLKPPVTTTARALAYRERIMKALPPGSSFEPLMTLY   95 (364)
T ss_pred             EEecCCcceeeEccCc------HHHHhhhHHhcCCcCEEEECC-CCCCCcCCHHHHHHHHHHHhhhcCCCcceEEEEEEe
Confidence            6689999999999974      234455667799999999999 8888888999998888887765  457999887763


Q ss_pred             CCChhhHHHHHHHHHcCCc-EEEEeecCCCCC-CCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCc
Q 015826          173 PENAYNASALEALLNAGVL-GLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT  250 (399)
Q Consensus       173 ~~~~~~~~~l~~l~~~G~~-~ik~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~  250 (399)
                      .......++++++.+.|+. +||+|+...+.+ +....+.+.+..+++.++++|+++.+|+|+.+....          .
T Consensus        96 lt~~~~l~Ei~~~~~~Gvv~gfKlyp~~~tt~s~~gv~d~~~l~~~le~~~e~G~~L~vH~E~~~~~~~----------~  165 (364)
T PLN02599         96 LTDNTTPEEIKAAKASGVVFAVKLYPAGATTNSQAGVTDLGKCLPVLEEMAEQGMPLLVHGEVTDPSVD----------I  165 (364)
T ss_pred             cCCCCCHHHHHHHHHCCCcEEEEECcccCcCCCccccCCHHHHHHHHHHHHhcCCEEEEecCCCccccc----------c
Confidence            2222356889998889999 999997543211 122334689999999999999999999998653110          0


Q ss_pred             hhhhcCCCCCChHHHHHHHHHHH--HHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEcccccccccc
Q 015826          251 RSYSTYLKTRPPSWEEAAIRELL--TVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA  328 (399)
Q Consensus       251 ~~~~~~~~~~p~~~E~~~v~~~~--~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~  328 (399)
                      .           ..|...+.+++  .+++.       +++++|++|+|++ +++++++++|++  +|++|+|||||+|++
T Consensus       166 ~-----------~~E~~~i~r~l~~~la~~-------~g~kI~i~HiSt~-~~ve~v~~ak~~--~vtae~tpHhL~l~~  224 (364)
T PLN02599        166 F-----------DREKVFIDTILAPLVQKL-------PQLKIVMEHITTM-DAVEFVESCGDG--NVAATVTPQHLLLNR  224 (364)
T ss_pred             c-----------ccHHHHHHHHHHHHHHhc-------cCCeEEEEecChH-HHHHHHHhccCC--CEEEEecHHHHhcCH
Confidence            0           01333456666  46654       5999999999999 999999999854  999999999999999


Q ss_pred             ccCC--CCCcceEEcCCCCChhhHHHHHHHHhcCCc-cEEeCCCCCCCcccccCCcCCcccccCCcchhcc
Q 015826          329 EEIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHI-DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQV  396 (399)
Q Consensus       329 ~~~~--~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i-d~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~  396 (399)
                      +++.  ..++.+||+||||+++||++||+++.+|.+ |+|+|||+||+.++|+        +++|++|+++
T Consensus       225 ~~~~~~~~~~~~k~~PPlR~~~dr~aL~~al~~G~i~~~i~SDHaPh~~~~K~--------~~~g~~Gi~~  287 (364)
T PLN02599        225 NALFQGGLQPHNYCLPVLKREIHREALVKAATSGSKKFFLGTDSAPHPKRAKE--------ASCGCAGIYS  287 (364)
T ss_pred             HHHhccCCCCCeEEECCCCCHHHHHHHHHHHHcCCCCEEEecCCCCCChHHhc--------CCCCCCCccc
Confidence            8865  346789999999999999999999999996 8999999999988874        3567777776

>TIGR00856 pyrC_dimer dihydroorotase, homodimeric type

Probab=100.00  E-value=3.3e-39  Score=305.99  Aligned_cols=261  Identities=18%  Similarity=0.221  Sum_probs=201.9

Q ss_pred             EEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC--ceeEEeeeeee
Q 015826           95 VIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI--YVDVGFWGGLV  172 (399)
Q Consensus        95 ~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~  172 (399)
                      +.+|---|+|+|+++.+      +.....-....|||++++|+ ++.|...+.+.++.+.+.+....  .++|.+++++.
T Consensus         2 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~vt~vv~mP-nt~P~~~~~e~~~~~~~~~~~~s~~~vDf~~~~~v~   74 (341)
T TIGR00856         2 LTIRRPDDWHLHLRDGA------MLKAVLPYTSEIFSRAIVMP-NLAPPVTTVEAAVAYRERILDAVPAGHDFTPLMTLY   74 (341)
T ss_pred             ceecCccceeeeccCch------HHHHHHHHHHhhcCEEEECC-CCCCCCCCHHHHHHHHHHHHhhCCCCcceEEEEEEE
Confidence            35677789999999753      34455556677899999999 66777777788888777766555  36899888885


Q ss_pred             CCChhhHHHHHHHHHc-CCcEEEEeecCCCC-CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCc
Q 015826          173 PENAYNASALEALLNA-GVLGLKSFMCPSGI-NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT  250 (399)
Q Consensus       173 ~~~~~~~~~l~~l~~~-G~~~ik~~~~~~~~-~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~  250 (399)
                      +......++++++.+. |+.+||+|+...+. .+....+++.+.++++.++++|+++.+|+|+....             
T Consensus        75 ~~~~~~~~Ei~~l~~~~Gv~g~Klf~~~~~~~~~~~v~dd~~l~~~~e~~~e~g~~v~vHaEd~~~~-------------  141 (341)
T TIGR00856        75 LTDSLTPEELERAKNEGVVRAVKLYPAGATTNSSHGVTDIDAIMPVLEAMEKIGLPLLLHGEVTHGD-------------  141 (341)
T ss_pred             CCCCCCHHHHHHHHHcCCeEEEEEccCCcccCCCcCCCCHHHHHHHHHHHHHcCCeEEEeecCCCCC-------------
Confidence            5444356889998877 99999998653211 11223466899999999999999999999986310             


Q ss_pred             hhhhcCCCCCChHHHHHHHH-HHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccc
Q 015826          251 RSYSTYLKTRPPSWEEAAIR-ELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE  329 (399)
Q Consensus       251 ~~~~~~~~~~p~~~E~~~v~-~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~  329 (399)
                      ....        ..|..++. .+..+|++      .+++++|++|+|++ +++++|+++|.   +||+|||||||+|+++
T Consensus       142 i~~~--------~~e~~a~~~~i~~lA~~------~~~~~~~i~H~st~-~~~~~i~~a~~---~vt~E~~ph~L~l~~~  203 (341)
T TIGR00856       142 IDIF--------DREARFIESVLEPLRQR------FPALKVVLEHITTK-DAIDYVEDGNN---RLAATITPQHLMFTRN  203 (341)
T ss_pred             cccc--------cchhhhhHHHHHHHHHH------ccCCeEEEEecCcH-HHHHHHHHcCC---CEEEEEcHHHHhccHH
Confidence            0000        01333444 33455554      35899999999999 99999998865   3999999999999999


Q ss_pred             cCCC--CCcceEEcCCCCChhhHHHHHHHHhcCCcc-EEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          330 EIPD--GDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       330 ~~~~--~~~~~~~~Pplr~~~~~~~l~~~l~~G~id-~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      ++..  +|+.+||+||||+++||++||++|++|+|| +|+|||+||+.++|..     +.+++|++|+|+++
T Consensus       204 ~~~~~~~~~~~k~~PPlR~~~d~~aL~~~l~~G~id~~i~SDHaP~~~~~K~~-----~~~~~G~~g~e~~l  270 (341)
T TIGR00856       204 DLLGGGVNPHLYCLPILKRNIHQQALLELAASGFPKFFLGTDSAPHARHRKES-----SCGCAGCFSAPTAL  270 (341)
T ss_pred             HHhccCCCCceEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChhHcCC-----CCCCCCcccHHHHH
Confidence            8765  578999999999999999999999999999 6999999999888853     24899999999864

This homodimeric form of dihydroorotase is less common in microbial genomes than a related dihydroorotase that appears in a complex with aspartyltranscarbamoylase or as a homologous domain in multifunctional proteins of pyrimidine biosynthesis in higher eukaryotes.

>PRK05451 dihydroorotase; Provisional

Probab=100.00  E-value=4.8e-38  Score=299.56  Aligned_cols=263  Identities=19%  Similarity=0.216  Sum_probs=194.1

Q ss_pred             EEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc--CceeEEeeeeee
Q 015826           95 VIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLV  172 (399)
Q Consensus        95 ~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~  172 (399)
                      +-+|--||+|+|+++. ... .++.++++    .++|++++|+ ++.|...+.+.++.+...+.+.  ..+++.+++++.
T Consensus         5 ~~~~~~~d~h~hl~~~-~~~-~~~~~~~~----~~~t~~v~mP-nt~P~~~~~~~l~~~~~~a~~~~~~~~d~~~~~~i~   77 (345)
T PRK05451          5 LTIRRPDDWHLHLRDG-AML-KAVVPYTA----RQFGRAIVMP-NLVPPVTTVAQALAYRERILAALPAGSNFEPLMTLY   77 (345)
T ss_pred             EEecCcceEEEecCCc-hHH-HHHHHHHH----HhcCEEEECC-CCCCCCCCHHHHHHHHHHHHhhCCCCCcEEEEEEEE
Confidence            4567889999999964 322 24555544    4699999999 7777777788888877766654  335777777665


Q ss_pred             CCChhhHHHHHHHHHcCCc-EEEEeecCCCCC-CCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCc
Q 015826          173 PENAYNASALEALLNAGVL-GLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT  250 (399)
Q Consensus       173 ~~~~~~~~~l~~l~~~G~~-~ik~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~  250 (399)
                      .......++++++.+.|+. +||+|+...+.. +....+++.+.++++.++++|+++.+|+++.+....          .
T Consensus        78 ~~~~~~~~El~~~~~~Gvv~g~Kl~~~~~~~~~~~~~~dd~~l~~~~e~~~~~g~~V~vHaE~~~~~~~----------~  147 (345)
T PRK05451         78 LTDNTDPDELERAKASGVVTAAKLYPAGATTNSDAGVTDIEKIYPVLEAMQKLGMPLLVHGEVTDPDID----------I  147 (345)
T ss_pred             eCCCCCHHHHHHHHHCCCEEEEEEecccCccCCccCcCCHHHHHHHHHHHHHcCCEEEEecCCCCcccc----------c
Confidence            4433456889999889954 999997542110 111237889999999999999999999998543100          0


Q ss_pred             hhhhcCCCCCChHHHHHHHHHH-HHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccc
Q 015826          251 RSYSTYLKTRPPSWEEAAIREL-LTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE  329 (399)
Q Consensus       251 ~~~~~~~~~~p~~~E~~~v~~~-~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~  329 (399)
                      .       .    .|...+.+. ..+|++      .+|+++||+|+|++ +++++|+++   |.+||+|||||||+|+++
T Consensus       148 ~-------~----~e~~~~~~~l~~lA~~------~pg~~lhI~Hlst~-~~~e~i~~a---~~~it~Et~ph~L~l~~~  206 (345)
T PRK05451        148 F-------D----REAVFIDRVLEPLRRR------FPKLKIVFEHITTK-DAVDYVREA---NDNLAATITPHHLLINRN  206 (345)
T ss_pred             c-------c----chHHHHHHHHHHHHHh------cCCCcEEEEecCcH-HHHHHHHhc---CCCEEEEecHHHHhcCHH
Confidence            0       0    123344444 447765      35899999999999 999999877   569999999999999998


Q ss_pred             cCC--CCCcceEEcCCCCChhhHHHHHHHHhcCCcc-EEeCCCCCCCcccccC--CcCCcccccCCcchhc
Q 015826          330 EIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLL--DEGNFLKAWGGISSLQ  395 (399)
Q Consensus       330 ~~~--~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id-~i~sdh~p~~~~~k~~--~~~~~~~~~~G~~g~e  395 (399)
                      ++.  ..++.+||+||||+++||++||++|++|.|| +|+|||+||+.++|+.  |...++.+++|++++.
T Consensus       207 ~~~~~~~~~~~k~~PPLR~~~d~~aLw~~l~~G~Id~~i~SDHaP~~~~~K~~~~G~~gi~~~~~g~~~~~  277 (345)
T PRK05451        207 DMLVGGIRPHLYCLPILKRETHRQALREAATSGNPKFFLGTDSAPHARHAKESACGCAGIFSAPAALELYA  277 (345)
T ss_pred             HHhCCCcCCCeEEeCCCCCHHHHHHHHHHHHcCCCCEEEeCCCCCCChHHhCCCCCCCchhhHHHHHHHHH
Confidence            765  3467899999999999999999999999999 8999999999988853  1223555555555443

>cd01297 D-aminoacylase D-aminoacylases (N-acyl-D-Amino acid amidohydrolases) catalyze the hydrolysis of N-acyl-D-amino acids to produce the corresponding D-amino acids, which are used as intermediates in the synthesis of pesticides, bioactive peptides, and antibiotics

Probab=100.00  E-value=1.5e-36  Score=297.62  Aligned_cols=259  Identities=25%  Similarity=0.301  Sum_probs=198.4

Q ss_pred             cEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHH
Q 015826           44 QYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG  121 (399)
Q Consensus        44 ~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~  121 (399)
                      +++|+|++|+++.+  ...++|.|+||+|++|++....    .+.++||++|++|+|||||+|+|+..+...     ...
T Consensus         1 d~~i~n~~v~~~~~~~~~~~~i~I~~g~I~~i~~~~~~----~~~~~iD~~G~~v~PG~iD~H~H~~~~~~~-----~~~   71 (415)
T cd01297           1 DLVIRNGTVVDGTGAPPFTADVGIRDGRIAAIGPILST----SAREVIDAAGLVVAPGFIDVHTHYDGQVFW-----DPD   71 (415)
T ss_pred             CEEEECCEEECCCCCccccceEEEECCEEEEEecCCCC----CCCeEEECCCCEEccCEeeeeecCCccccc-----Ccc
Confidence            47899999999876  3578999999999999865321    246799999999999999999999876432     234


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcH------------------------HHHHHHHHHHhcc-CceeEE---eeeeeeC
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTIST------------------------ETLKLKVDAAEKR-IYVDVG---FWGGLVP  173 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~------------------------~~~~~~~~~~~~~-~~~~~~---~~~~~~~  173 (399)
                      ++.++.+||||++++++++.|.....                        +.+..+++.+... ..+|+.   +++.+..
T Consensus        72 ~~~a~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~l~~  151 (415)
T cd01297          72 LRPSSRQGVTTVVLGNCGVSPAPANPDDLARLIMLMEGLVALGEGLPWGWATFAEYLDALEARPPAVNVAALVGHAALRR  151 (415)
T ss_pred             hhhHHhCcEEEEEeccccCccCCCChhhhhhhhhhhhcccccccccCCCCCCHHHHHHHHHhcCCCcCeeeccCcHHHHH
Confidence            77889999999999986444443332                        4455666666444 468887   5554431


Q ss_pred             ---------CChhhHHHHHHH----HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhH
Q 015826          174 ---------ENAYNASALEAL----LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH  240 (399)
Q Consensus       174 ---------~~~~~~~~l~~l----~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~  240 (399)
                               .+.+.+++++++    ++.|+.+||.++.+..   ....+++++.++++.|+++|.++.+|+++.+.    
T Consensus       152 ~~~g~~~~~~~~~~~~~~~~l~~~al~~Ga~g~~~~~~y~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~----  224 (415)
T cd01297         152 AVMGLDAREATEEELAKMRELLREALEAGALGISTGLAYAP---RLYAGTAELVALARVAARYGGVYQTHVRYEGD----  224 (415)
T ss_pred             HHhCcCCCCCCHHHHHHHHHHHHHHHHCCCeEEEcccccCC---cccCCHHHHHHHHHHHHHcCCEEEEEECcccc----
Confidence                     122345666666    4689999998764421   01468999999999999999999999987542    


Q ss_pred             HhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHH---------HHHHHHHHHC
Q 015826          241 VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS---------LDLLMEAKTN  311 (399)
Q Consensus       241 ~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~---------l~~i~~ak~~  311 (399)
                                             .|..++.+++++++++       |+|+||+|+|+. +.         +++|+++|++
T Consensus       225 -----------------------~e~~av~~~~~~a~~~-------g~r~~i~H~ss~-~~~~~~~~~~~l~~i~~a~~~  273 (415)
T cd01297         225 -----------------------SILEALDELLRLGRET-------GRPVHISHLKSA-GAPNWGKIDRLLALIEAARAE  273 (415)
T ss_pred             -----------------------cHHHHHHHHHHHHHHh-------CCCEEEEEEecC-CCcccchHHHHHHHHHHHHHh
Confidence                                   3566899999999975       899999999987 77         9999999999


Q ss_pred             CCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCC
Q 015826          312 GDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTV  373 (399)
Q Consensus       312 G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~  373 (399)
                      |++|++++||||+.+                        +..|+++.++.+++++|||+|+.
T Consensus       274 G~~v~~e~~p~~~~~------------------------~~~~~~l~~~~~~~i~SDh~~~~  311 (415)
T cd01297         274 GLQVTADVYPYGAGS------------------------EDDVRRIMAHPVVMGGSDGGALG  311 (415)
T ss_pred             CCcEEEEeCCCCCCc------------------------HHHHHHHHcCCCceeeeCCCcCC
Confidence            999999999987754                        23344444458999999999974

>TIGR02318 phosphono_phnM phosphonate metabolism protein PhnM

Probab=100.00  E-value=4.8e-32  Score=261.09  Aligned_cols=284  Identities=24%  Similarity=0.311  Sum_probs=211.8

Q ss_pred             EEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCC------CCCCCc---C
Q 015826           46 WLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD------PGRTEW---E  116 (399)
Q Consensus        46 li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~------~~~~~~---e  116 (399)
                      +|+|++|+++++..+++|.|+||||++|++...     ...++||++|++|+|||||+|+|..+      ++. .|   +
T Consensus         1 ~i~~~~vv~~~~~~~~~i~i~dg~I~~i~~~~~-----~~~~~iD~~G~~v~PGlID~H~h~~e~~~~prp~~-~~~~~~   74 (376)
T TIGR02318         1 VLSNARLVLEDEVVEGSVVIEDGAIADIGEGPV-----ALAEAIDGEGDLLLPGLIDLHTDNLERHMSPRPGV-DWPIDA   74 (376)
T ss_pred             CEeCeEEECCCceEeeeEEEECCEEEEecCCCC-----CCCceEeCCCCEEeccEEEcccCccccCcCCCCCC-CcchHH
Confidence            489999999888777899999999999987432     24568999999999999999999987      554 45   6


Q ss_pred             chHHHHHHHHcCCeeeeecCcCCC--CCCCCcHHHHHHHH---HHHhcc--CceeEEeeeeeeCCChhhHHHHHHHHHcC
Q 015826          117 GFPSGTKAAAAGGITTLIDMPLNS--DPSTISTETLKLKV---DAAEKR--IYVDVGFWGGLVPENAYNASALEALLNAG  189 (399)
Q Consensus       117 ~~~~~~~~al~~GvTtv~d~~~~~--~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~l~~~G  189 (399)
                      ++....++++.+||||+++|+.+.  .|...+.+.++.++   +.++.+  ..+|+.+|+++.-..++..++++++.+.|
T Consensus        75 ~~~~~~~~~aa~GiTT~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~h~~~e~~~~~~~~~l~~~~~~g  154 (376)
T TIGR02318        75 AIVEHDKQLAAAGITTVFDALALGDTESGGRRPDNLRRMIDAISEARDRGLLRADHRLHLRCELPNEEVLPELEELIDDP  154 (376)
T ss_pred             HHHHHHHHHhhCCcceEEeeEEecccCCcCccHHHHHHHHHHHHHhhhcCchhhhceeEEEEEecCccHHHHHHHHhcCC
Confidence            788899999999999999998443  45556677777776   555544  78999999988544555688999999999


Q ss_pred             CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHH
Q 015826          190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAI  269 (399)
Q Consensus       190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v  269 (399)
                      +.+||.||...+ ..++..+.+.+.+.+..  ++|   .+|+|+.+.+.....+.+      .   +        ..+++
T Consensus       155 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~g---~~~~e~~~~~~~~~~~~~------~---~--------~~e~i  211 (376)
T TIGR02318       155 RVDLISLMDHTP-GQRQFRDLEKYREYYRG--KRG---LSDDEFDEIVEERIARRA------E---Y--------GLANR  211 (376)
T ss_pred             CcCEEEEeCCCC-CcccccCHHHHHHHHHh--hcC---CCHHHHHHHHHHHHHHHh------h---c--------cHHHH
Confidence            999999998765 34456787777776654  667   779998776553332211      0   0        14578


Q ss_pred             HHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEcccccccccc-ccCCCCCcc-eEEcC-CCCC
Q 015826          270 RELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA-EEIPDGDTR-FKCAP-PIRD  346 (399)
Q Consensus       270 ~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~-~~~~~~~~~-~~~~P-plr~  346 (399)
                      ++++++|+++       |+++ .+|...   +.+.++++++.|+.+.-    |.+...+ +.+...|.. .++.| |+|.
T Consensus       212 ~~~v~~A~~~-------G~~v-~sH~~~---~~e~i~~a~~~Gv~~~E----~~~t~e~a~~~~~~G~~v~~~~p~~~r~  276 (376)
T TIGR02318       212 SEIAALARAR-------GIPL-ASHDDD---TPEHVAEAHDLGVTISE----FPTTLEAAKEARSLGMQILMGAPNIVRG  276 (376)
T ss_pred             HHHHHHHHHC-------CCeE-EEecCC---CHHHHHHHHHCCCChhc----cCCCHHHHHHHHHcCCeEEECCcccccc
Confidence            8999999975       8887 888743   35678899999984321    1111111 122233544 56667 7887


Q ss_pred             hhh--HHHHHHHHhcCCccEEeCCCCCCC
Q 015826          347 AAN--KEKLWEALMDGHIDMLSSDHSPTV  373 (399)
Q Consensus       347 ~~~--~~~l~~~l~~G~id~i~sdh~p~~  373 (399)
                      ..+  +..+|+++++|.+++++|||.|+.
T Consensus       277 ~~~~~~~~l~~~~~~G~~~~l~SD~~p~~  305 (376)
T TIGR02318       277 GSHSGNLSARELAHEGLLDVLASDYVPAS  305 (376)
T ss_pred             ccccchHHHHHHHHCCCcEEEEcCCCcHH
Confidence            766  889999999999999999999875

This family consists of proteins from in the PhnM family. PhnM is a a protein associated with phosphonate utilization in a number of bacterial species. In Pseudomonas stutzeri WM88, a protein that is part of a system for the oxidation of phosphites (another form of reduced phosphorous compound) scores between trusted and noise cutoffs.

>PRK15446 phosphonate metabolism protein PhnM; Provisional

Probab=100.00  E-value=5e-32  Score=261.81  Aligned_cols=288  Identities=22%  Similarity=0.289  Sum_probs=204.2

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccC----CCC-C---C
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD----DPG-R---T  113 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~----~~~-~---~  113 (399)
                      |++++|+|++|+++++..+++|+|+||||++|++...     .+.++||++|++|||||||+|+|..    .+. .   .
T Consensus         1 ~~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~-----~~~~~iDa~g~~v~PG~ID~H~h~~~~~~~p~~~~~~~   75 (383)
T PRK15446          1 MMEMILSNARLVLPDEVVDGSLLIEDGRIAAIDPGAS-----ALPGAIDAEGDYLLPGLVDLHTDNLEKHLAPRPGVDWP   75 (383)
T ss_pred             CccEEEECcEEEcCCCceeeeEEEECCEEEEecCCCC-----CCCceEeCCCCEEEeCeEEcccCCcccccCCCCCCccc
Confidence            4689999999999887778999999999999997432     1347899999999999999999654    232 1   2


Q ss_pred             CcCchHHHHHHHHcCCeeeeecCcCCC-CCC-CC----cHHHHHHHHH--HHhccCceeEEeeeeeeCCChhhHHHHHHH
Q 015826          114 EWEGFPSGTKAAAAGGITTLIDMPLNS-DPS-TI----STETLKLKVD--AAEKRIYVDVGFWGGLVPENAYNASALEAL  185 (399)
Q Consensus       114 ~~e~~~~~~~~al~~GvTtv~d~~~~~-~~~-~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  185 (399)
                      .++++..++++++++||||++||+... .|. ..    ....+..+++  ....+..+||++|+.+...+++.+++++++
T Consensus        76 ~~~~~~~~~~~a~~gG~Tt~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vD~~~h~~~~~~~~~~~~~l~~~  155 (383)
T PRK15446         76 ADAALAAHDAQLAAAGITTVFDALSVGDEEDGGLRSRDLARKLIDAIEEARARGLLRADHRLHLRCELTNPDALELFEAL  155 (383)
T ss_pred             hHHHHHHHHHHHHhCCccEeeeeeEeccCCCCCcccHHHHHHHHHHHHHhhhcCchhccceeEEEEEecCcchHHHHHHH
Confidence            227888999999999999999985333 231 11    1224445555  344677899999999876566678899999


Q ss_pred             HHcCCcEEEEeecCC-CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHH
Q 015826          186 LNAGVLGLKSFMCPS-GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW  264 (399)
Q Consensus       186 ~~~G~~~ik~~~~~~-~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  264 (399)
                      ++.|+.+||.||+.. +...++  ..+.+++..  ++++|   .+|+|+.+...+..                 .+|+..
T Consensus       156 ~~~g~~~~k~fm~~~p~~~~~~--~~~~~~~~~--~~~~g---~~~~e~~~~~~~~~-----------------~~~~~~  211 (383)
T PRK15446        156 LAHPRVDLVSLMDHTPGQRQFR--DLEKYREYY--AGKYG---LSDEEFDAFVEERI-----------------ALSARY  211 (383)
T ss_pred             hcCCCcCEEEEeCCCCcccccc--CHHHHHHHH--HhhcC---CCHHHHHHHHHHHH-----------------HhHhhc
Confidence            999999999999875 322232  333444444  45778   77999887644222                 125555


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEcccccccccc-ccCCCCCcce-EEcC
Q 015826          265 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSA-EEIPDGDTRF-KCAP  342 (399)
Q Consensus       265 E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~-~~~~~~~~~~-~~~P  342 (399)
                      +.+.+++++++|+++       |+++ .+|...   ..+.++++++.|+.++.  .|  ....+ +.....|... ++.|
T Consensus       212 ~~e~i~~~v~~A~~~-------g~~v-~sH~~~---~~~~i~~a~~~Gv~~~e--~~--~~~e~~~~~~~~g~~v~~~~p  276 (383)
T PRK15446        212 APPNRRAIAALARAR-------GIPL-ASHDDD---TPEHVAEAHALGVAIAE--FP--TTLEAARAARALGMSVLMGAP  276 (383)
T ss_pred             CHHHHHHHHHHHHHC-------CCce-eecCCC---CHHHHHHHHHcCCceee--CC--CcHHHHHHHHHCCCEEEeCCc
Confidence            677899999999976       8887 778732   23568889999998863  11  11111 1112223333 3334


Q ss_pred             -CCCC--hhhHHHHHHHHhcCCccEEeCCCCCCC
Q 015826          343 -PIRD--AANKEKLWEALMDGHIDMLSSDHSPTV  373 (399)
Q Consensus       343 -plr~--~~~~~~l~~~l~~G~id~i~sdh~p~~  373 (399)
                       |+|.  ...+..+|++++.|.+++++|||.|++
T Consensus       277 ~~~r~~~~~~~~~~~~~~~~Gv~~~lgSD~~p~~  310 (383)
T PRK15446        277 NVVRGGSHSGNVSALDLAAAGLLDILSSDYYPAS  310 (383)
T ss_pred             ccccCCcccchHhHHHHHHCCCcEEEEcCCChhh
Confidence             4776  567899999999999999999998875

>PRK12394 putative metallo-dependent hydrolase; Provisional

Probab=99.92  E-value=3.3e-23  Score=201.00  Aligned_cols=256  Identities=20%  Similarity=0.240  Sum_probs=164.6

Q ss_pred             CccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchH
Q 015826           42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP  119 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~  119 (399)
                      +++++|+|++|+++..  ..+++|+|+||+|++|++....    .+.++||++|++|+|||||+|+|+..++..   +..
T Consensus         2 ~~~~li~~~~i~~~~~~~~~~~~i~i~~g~I~~i~~~~~~----~~~~viD~~g~~v~PGliD~H~H~~~~g~~---~~~   74 (379)
T PRK12394          2 KNDILITNGHIIDPARNINEINNLRIINDIIVDADKYPVA----SETRIIHADGCIVTPGLIDYHAHVFYDGTE---GGV   74 (379)
T ss_pred             CccEEEECcEEECCCCCcccccEEEEECCEEEEEcCCCCC----CCCeEEECCCCEEECCEEEeeecCCCCCcc---ccc
Confidence            4578999999998764  3467999999999999874321    245799999999999999999999765432   223


Q ss_pred             HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh---ccCceeEEeeeeeeCC-----Chh--hHHHHHHHHH--
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE---KRIYVDVGFWGGLVPE-----NAY--NASALEALLN--  187 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-----~~~--~~~~l~~l~~--  187 (399)
                      +....++++||||++|++ ..  ...+.+.+........   .+.++++++++.....     ...  ..++.+++++  
T Consensus        75 ~~~~~~l~~G~Ttv~d~g-~~--~~~~~~~~~~~~~a~~~~gira~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  151 (379)
T PRK12394         75 RPDMYMPPNGVTTVVDAG-SA--GTANFDAFYRTVICASKVRIKAFLTVSPPGQTWSGYQENYDPDNIDENKIHALFRQY  151 (379)
T ss_pred             CHHHHHHhCCccEEEECC-CC--CcccHHHHHHHHhhhhcceeeeEEeeecccccccCcccccChhHCCHHHHHHHHHHC
Confidence            345668999999999997 22  2233444444433222   2344455544322110     101  1356666653  


Q ss_pred             -cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHH
Q 015826          188 -AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE  266 (399)
Q Consensus       188 -~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~  266 (399)
                       .++.++|++++...  . ...+++.++++++.|+++|+++++|+++....                             
T Consensus       152 ~~~~~g~ki~~~~~~--~-~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~-----------------------------  199 (379)
T PRK12394        152 RNVLQGLKLRVQTED--I-AEYGLKPLTETLRIANDLRCPVAVHSTHPVLP-----------------------------  199 (379)
T ss_pred             cCcEEEEEEEEeccc--c-cccchHHHHHHHHHHHHcCCCEEEEeCCCCcc-----------------------------
Confidence             46778887754421  1 14578999999999999999999999764320                             


Q ss_pred             HHHHHHHHHHhhhccCCCCCCceEEEEc-------CCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceE
Q 015826          267 AAIRELLTVAKDTRTDGPAEGAHLHIVH-------LSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFK  339 (399)
Q Consensus       267 ~~v~~~~~~a~~~~~~~~~~g~~vhi~H-------~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~  339 (399)
                        ..+++.+...       .....|+.|       .++. +..+.+++++++|+.+.+. ++                  
T Consensus       200 --~~~~~~~l~~-------g~~~~H~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~-~g------------------  250 (379)
T PRK12394        200 --MKELVSLLRR-------GDIIAHAFHGKGSTILTEEG-AVLAEVRQARERGVIFDAA-NG------------------  250 (379)
T ss_pred             --HHHHHHhcCC-------CCEEEecCCCCCCCcCCCCC-CChHHHHHHHhCCeEEEec-CC------------------
Confidence              1112222221       023345544       3333 4467788888888522111 11                  


Q ss_pred             EcCCCCChhhHHHHHHHHhcCC-ccEEeCCCCCCC
Q 015826          340 CAPPIRDAANKEKLWEALMDGH-IDMLSSDHSPTV  373 (399)
Q Consensus       340 ~~Pplr~~~~~~~l~~~l~~G~-id~i~sdh~p~~  373 (399)
                           ++..+.+.+|+++.+|. .++|+||++|.+
T Consensus       251 -----~s~~~~~~~~~~l~~G~~~~~lgTD~~~~~  280 (379)
T PRK12394        251 -----RSHFDMNVARRAIANGFLPDIISSDLSTIT  280 (379)
T ss_pred             -----ccccchHHHHHHHHCCCCceEEECCCCCCC
Confidence                 23335678899999996 799999999875

>PRK10657 isoaspartyl dipeptidase; Provisional

Probab=99.92  E-value=3e-23  Score=202.39  Aligned_cols=287  Identities=21%  Similarity=0.253  Sum_probs=166.4

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC---CcCchH
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---EWEGFP  119 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~---~~e~~~  119 (399)
                      |.++|+|++|++++...+++|.|+||+|++|++..+.....++.++||++|++|+|||||+|+|+...+..   ...+..
T Consensus         1 ~~~~i~~~~v~~~~~~~~~~i~i~~g~I~~v~~~~~~~~~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~t~~   80 (388)
T PRK10657          1 MFTLLKNAHVYAPEDLGKKDILIAGGKIIAIADNINIPDIVPDIEVIDASGKILVPGFIDQHVHIIGGGGEGGFSTRTPE   80 (388)
T ss_pred             CeEEEEccEEECCCCCcceEEEEECCEEEEecCCccccccCCCCeEEECCCCEEcccceeeeeCcccCCCCcccccCCHH
Confidence            35789999999987666789999999999998654221111246899999999999999999998742211   112445


Q ss_pred             HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecC
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP  199 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~  199 (399)
                      ..+++++++||||++|++ +..+.....+.+....+...                            +.|+..+.. ...
T Consensus        81 ~~~~~~~~~GvTTvvd~~-~~~~~~~~~~~~~~~~~~~~----------------------------~~Gv~~~~~-~~~  130 (388)
T PRK10657         81 VQLSDLTEAGITTVVGLL-GTDGITRSMESLLAKARALE----------------------------EEGISAYMY-TGS  130 (388)
T ss_pred             HHHHHHHhCCceEEECCC-CCCCCCCCHHHHHHHHHHHH----------------------------hhCCEEEEE-ecC
Confidence            677889999999999998 43322222322222222221                            223333211 000


Q ss_pred             CCCCCCCCC-CHHHHHHHHHHHHh-cCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHh
Q 015826          200 SGINDFPMT-NASHIKEGLSVLAR-YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK  277 (399)
Q Consensus       200 ~~~~~~~~~-~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~  277 (399)
                      ..   .+.. ..+.+.+-+...++ .|.                       +......+...++...+...+.++...++
T Consensus       131 ~~---~~~~~~~~~~~~~~~~~~~~~g~-----------------------g~~~~~~~~~~~~~~~~l~~~~~~a~~~~  184 (388)
T PRK10657        131 YH---VPVRTITGSIRKDIVLIDKVIGV-----------------------GEIAISDHRSSQPTVEELARLAAEARVGG  184 (388)
T ss_pred             CC---CCchhhhcchhhceehhhhhhCc-----------------------ceeeeccCCCCCCCHHHHHHHHHHHHHHH
Confidence            00   0000 00000000000000 000                       00111122234455555556666665555


Q ss_pred             hhccCCCCCCc-eEEEEcCC-ChhHHHHHHHHH-HHCCCCEEEEcccccccccccc------CCCCCcce--E-EcCCCC
Q 015826          278 DTRTDGPAEGA-HLHIVHLS-DASSSLDLLMEA-KTNGDSITVETCPHYLAFSAEE------IPDGDTRF--K-CAPPIR  345 (399)
Q Consensus       278 ~~~~~~~~~g~-~vhi~H~s-~~~~~l~~i~~a-k~~G~~vt~e~~p~~L~~~~~~------~~~~~~~~--~-~~Pplr  345 (399)
                      .+      .|. +.++.|++ +. ..++.++++ ++.|+.+++ +|++|+.++.+.      +...|.+.  . ++||++
T Consensus       185 ~~------~g~~~~i~vH~~~~~-~~l~~v~~~l~~~Gv~~~~-~~~~H~~~~~~~~~~~~~~~~~G~~~~v~~~~~~~~  256 (388)
T PRK10657        185 LL------SGKAGIVHVHMGDGK-KGLQPLFELLENTDIPISQ-FLPTHVNRNEPLFEQALEFAKKGGVIDLTTSDPDFL  256 (388)
T ss_pred             Hh------cCCCCEEEEEeCCch-HHHHHHHHHHHhcCCCcce-eeCcccCCCHHHHHHHHHHHHcCCeEEEecCCCccc
Confidence            43      232 26888988 45 788888555 688999986 999999885442      11223222  3 788888


Q ss_pred             Chh---hHHHHHHHHhcCC-cc--EEeCCCCCCCcccccCCcCCcccccCCcchhccc
Q 015826          346 DAA---NKEKLWEALMDGH-ID--MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG  397 (399)
Q Consensus       346 ~~~---~~~~l~~~l~~G~-id--~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~  397 (399)
                      .+.   ..+.+|+++++|. +|  +++|||+.....-..  ++.+  ++.|..+++++
T Consensus       257 ~~~~~~~~~~l~~~~~~G~~~d~v~l~tD~~~~~~~~~~--~g~~--~~~g~~~~~~l  310 (388)
T PRK10657        257 GEGEVAPAEALKRALEAGVPLSRVTLSSDGNGSLPKFDE--DGNL--VGLGVGSVESL  310 (388)
T ss_pred             ccCccCHHHHHHHHHHcCCChhheEEECCCCCCCceecc--CCCE--eccCcCchhhH
Confidence            774   4588999999998 88  999999654321100  1122  56677776654

>PRK13206 ureC urease subunit alpha; Reviewed

Probab=99.91  E-value=3.6e-23  Score=203.26  Aligned_cols=213  Identities=23%  Similarity=0.261  Sum_probs=152.1

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCC--C-------CCCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP--R-------NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~--~-------~~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      ..+++|+|++|+|+.+...++|.|+||||++|++.....  .       ...+.++||++|++|+|||||+|+|+..++ 
T Consensus        70 ~~DlVI~Na~IiD~~gi~~adI~IkDGrIvaIG~~~~p~~~~gv~~~~~ig~~tevIDaeG~iV~PG~ID~HVH~~~Pg-  148 (573)
T PRK13206         70 APDTVITGAVILDHWGIVKADVGIRDGRIVAIGKAGNPDIMDGVHPDLVIGPSTEIIAGNGRILTAGAIDCHVHFICPQ-  148 (573)
T ss_pred             CCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccccCCCCCEEEECCCCEEEeCEEeeeeccCCch-
Confidence            468999999999988777899999999999999742110  0       002468999999999999999999998764 


Q ss_pred             CCcCchHHHHHHHHcCCeeeeecCcCC----CCCCCCcHH--HHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHH
Q 015826          113 TEWEGFPSGTKAAAAGGITTLIDMPLN----SDPSTISTE--TLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL  186 (399)
Q Consensus       113 ~~~e~~~~~~~~al~~GvTtv~d~~~~----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  186 (399)
                              ..++++++||||+++|+.+    +.+...+..  .+....+... ...+|+++++..   +....+++.+++
T Consensus       149 --------~~~aALagGVTTvi~~G~gP~~~t~~~t~t~g~~~l~~~~~aa~-~~pvn~g~~g~g---~~~~~~~L~el~  216 (573)
T PRK13206        149 --------IVDEALAAGITTLIGGGTGPAEGSKATTVTPGAWHLARMLEALD-GWPVNVALLGKG---NTVSAEALWEQL  216 (573)
T ss_pred             --------HHHHHHcCCeEEEEcCCCCccccCcccccccchhHHHHHHHHhh-cCceeEEEecCc---CcCCHHHHHHHH
Confidence                    2388999999999997421    122222222  3334444433 467888887642   222356899999


Q ss_pred             HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHH
Q 015826          187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE  266 (399)
Q Consensus       187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~  266 (399)
                      ++|+.+||++..+       ..+++.+.+++++|+++|+++.+|+++-.+.                             
T Consensus       217 ~aGA~GfKi~~d~-------g~t~~~i~~aL~~A~~~gv~V~iHadtlne~-----------------------------  260 (573)
T PRK13206        217 RGGAGGFKLHEDW-------GSTPAAIDACLRVADAAGVQVALHSDTLNEA-----------------------------  260 (573)
T ss_pred             HCCCcEEeecCcc-------CCCHHHHHHHHHHHHHhCCEEEEECCCcccc-----------------------------
Confidence            9999999987432       3688999999999999999999999875431                             


Q ss_pred             HHHHHHHHHHhhhccCCCCCCceEEEEcCCCh--hHHHHHHHHHHHCC
Q 015826          267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA--SSSLDLLMEAKTNG  312 (399)
Q Consensus       267 ~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~--~~~l~~i~~ak~~G  312 (399)
                       +..+. .++..       .|..+|++|+...  ..+-++|+-+...+
T Consensus       261 -g~~E~-t~aa~-------~gr~iH~~H~egaggghapd~~~~~~~~n  299 (573)
T PRK13206        261 -GFVED-TLAAI-------AGRSIHAYHTEGAGGGHAPDIITVASHPN  299 (573)
T ss_pred             -chhhH-HHHHh-------cCCeEEEEeccCCCcCcccHHHHhcCCCC
Confidence             12222 23332       3889999999753  14456777775544

>PRK13308 ureC urease subunit alpha; Reviewed

Probab=99.91  E-value=6.8e-23  Score=200.42  Aligned_cols=174  Identities=25%  Similarity=0.299  Sum_probs=132.9

Q ss_pred             CccEEEEccEEEcC-CCceeeEEEEECCEEEEeccCCCCC--C-------CCCCCcEEeCCCCEEecceeecccccCCCC
Q 015826           42 YNQYWLTSKRIVTP-KGVISGAVEIKEGNIISIVSEEDWP--R-------NSKTGQVVDYGEAVIMPGLIDVHAHLDDPG  111 (399)
Q Consensus        42 ~~~~li~n~~vv~~-~~~~~~~V~I~dG~I~~Ig~~~~~~--~-------~~~~~~vID~~G~~vlPGlID~H~H~~~~~  111 (399)
                      ..+++|+|++|+|+ .+...++|.|+||||++|++.....  .       -.++.++||++|++|+|||||+|+|+..++
T Consensus        67 ~~DlVItNa~IIDp~~Gi~kaDIgIkDGrIaaIG~~~npd~~~gv~p~~~~g~~teVIDaeG~IVtPG~ID~HVH~~~Pg  146 (569)
T PRK13308         67 ALDFVLCNVTVIDPVLGIVKGDIGIRDGRIVGIGKAGNPDIMDGVDPRLVVGPGTDVRPAEGLIATPGAIDVHVHFDSAQ  146 (569)
T ss_pred             cCCEEEECeEEEcCCCCeEEeEEEEECCEEEEecCCCCccccccccccccCCCCCeEEECCCCEEEeCEEEeeeCCCCcc
Confidence            46899999999996 4566899999999999999753210  0       012568999999999999999999998754


Q ss_pred             CCCcCchHHHHHHHHcCCeeeeecCcCC-CCC-CCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcC
Q 015826          112 RTEWEGFPSGTKAAAAGGITTLIDMPLN-SDP-STISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAG  189 (399)
Q Consensus       112 ~~~~e~~~~~~~~al~~GvTtv~d~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G  189 (399)
                      +         .++++++||||+++++.. +.+ .......++.+++.... ..+++++++....   ...+++++++++|
T Consensus       147 ~---------~~aALagGVTTVi~gg~gPt~p~~t~g~~~i~~~l~aa~~-~pvN~g~~gkG~~---s~~aeL~eli~aG  213 (569)
T PRK13308        147 L---------VDHALASGITTMLGGGLGPTVGIDSGGPFNTGRMLQAAEA-WPVNFGFLGRGNS---SKPAALIEQVEAG  213 (569)
T ss_pred             H---------HHHHHcCCCcEEecCCcCCCCCCCCCCHHHHHHHHHHHhc-CCccEEEEcCCcc---cCHHHHHHHHHCC
Confidence            2         378999999999996421 112 24456777777776654 4588888754222   3467899999999


Q ss_pred             CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      +.+||++..+       ..+++.+.+++++|+++|++|.+|++.-.
T Consensus       214 A~GfKi~ed~-------g~t~~~i~~aL~~A~~~dv~VaiHadtln  252 (569)
T PRK13308        214 ACGLKIHEDW-------GAMPAAIDTCLEVADEYDFQVQLHTDTLN  252 (569)
T ss_pred             CCEEeecCCC-------CCCHHHHHHHHHHHHhcCCEEEEeCCCcC
Confidence            9999987432       24778999999999999999999998744

>PRK13207 ureC urease subunit alpha; Reviewed

Probab=99.91  E-value=9.1e-23  Score=200.91  Aligned_cols=214  Identities=25%  Similarity=0.304  Sum_probs=150.3

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCC-------CCCCCcEEeCCCCEEecceeecccccCCCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPR-------NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE  114 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~-------~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~  114 (399)
                      .++++|+|++|+++.+...++|.|+||||++|++......       ...+.++||++|++|+|||||+|+|+..++   
T Consensus        66 ~mDlVI~Na~Vvd~~gi~~adI~I~dGrI~~IG~~~~p~~~~~v~~~~~~~~eVIDa~G~iV~PG~ID~HvH~~~P~---  142 (568)
T PRK13207         66 AVDTVITNALILDHWGIVKADIGIKDGRIVAIGKAGNPDIQDGVDIIIGPGTEVIAGEGLIVTAGGIDTHIHFICPQ---  142 (568)
T ss_pred             cCCEEEECeEEECCCCeEEEEEEEECCEEEEEeCCCCccccccccccCCCCCeEEECCCCEEEeCeEECccCCcccc---
Confidence            4689999999999877778999999999999987421110       012568999999999999999999988753   


Q ss_pred             cCchHHHHHHHHcCCeeeeecCcCC----CCCCCCc--HHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHc
Q 015826          115 WEGFPSGTKAAAAGGITTLIDMPLN----SDPSTIS--TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA  188 (399)
Q Consensus       115 ~e~~~~~~~~al~~GvTtv~d~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  188 (399)
                            ..++++++||||+++|+.+    +.+...+  ...+...++... ...+++++++..   ..+..++++++++.
T Consensus       143 ------~~~aALagGVTTVi~mg~gP~~gt~~~t~tpG~~~l~~~l~~a~-~~pin~g~~g~g---~~~~~~~L~e~i~a  212 (568)
T PRK13207        143 ------QIEEALASGVTTMIGGGTGPATGTNATTCTPGPWHIHRMLQAAD-AFPMNIGFLGKG---NASLPEALEEQIEA  212 (568)
T ss_pred             ------HHHHHHcCCCCEEEcCCcCCccCCcccccccchHHHHHHHHHhh-cCCceEEEEcCC---CcccHHHHHHHHHc
Confidence                  2578999999999998421    1222212  233454444443 344677776532   22356788999999


Q ss_pred             CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHH
Q 015826          189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA  268 (399)
Q Consensus       189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~  268 (399)
                      |+.+||++..+       ..+++++.+++++|+++|+++.+|+++....                              +
T Consensus       213 GA~gfKi~~d~-------g~t~~~l~~aL~~A~~~gv~V~iHa~tlne~------------------------------G  255 (568)
T PRK13207        213 GAIGLKLHEDW-------GATPAAIDNCLSVADEYDVQVAIHTDTLNES------------------------------G  255 (568)
T ss_pred             CCCEEeecCCC-------CCCHHHHHHHHHHHHHhCCEEEEeCCCcccc------------------------------h
Confidence            99999987533       2578999999999999999999999764421                              1


Q ss_pred             HHHHHHHHhhhccCCCCCCceEEEEcCCCh--hHHHHHHHHHHHCCC
Q 015826          269 IRELLTVAKDTRTDGPAEGAHLHIVHLSDA--SSSLDLLMEAKTNGD  313 (399)
Q Consensus       269 v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~--~~~l~~i~~ak~~G~  313 (399)
                      ..+. .++.       ..|..+|+.|....  ..+-++++.+...|+
T Consensus       256 ~~e~-t~~a-------~~g~~iH~~H~egaggghapdii~~~~~~~v  294 (568)
T PRK13207        256 FVED-TIAA-------FKGRTIHTFHTEGAGGGHAPDIIKVAGEPNV  294 (568)
T ss_pred             HHHH-HHHh-------cCCCEEEEEeecCCCcCCchHHHHHhhcCCC
Confidence            1122 2222       23888999998731  134556777766664

>PRK13985 ureB urease subunit beta; Provisional

Probab=99.91  E-value=9.1e-23  Score=198.74  Aligned_cols=213  Identities=25%  Similarity=0.329  Sum_probs=151.1

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCC---------CCCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPR---------NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~---------~~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      ..+++|+|++|+|..+...++|.|+||||++|++......         -..+.++||++|++|+|||||+|+|+..|+.
T Consensus        64 ~~DlVI~Na~IiD~~gi~kaDI~IkdGrIaaIG~~gn~~~~~~v~~~~~ig~~tevIDa~G~iV~PG~ID~HvH~~~P~~  143 (568)
T PRK13985         64 ELDLIITNALIIDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQQ  143 (568)
T ss_pred             cCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEECCCCEEEeCEEEeeCCCCCccH
Confidence            4689999999999777778999999999999997532110         0125689999999999999999999976642


Q ss_pred             CCcCchHHHHHHHHcCCeeeeecCcC----CCCCCCCcHH--HHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHH
Q 015826          113 TEWEGFPSGTKAAAAGGITTLIDMPL----NSDPSTISTE--TLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL  186 (399)
Q Consensus       113 ~~~e~~~~~~~~al~~GvTtv~d~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  186 (399)
                               ...++++||||+++++.    ++.|...+..  .++..++.+... .+++++++..   .....+++++++
T Consensus       144 ---------~~~AlagGVTTvI~~G~gP~~~T~p~~~tpg~~~i~~ml~~a~~~-pvn~gf~gkG---~~~~l~eL~el~  210 (568)
T PRK13985        144 ---------IPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEY-SMNLGFLGKG---NSSNDASLADQI  210 (568)
T ss_pred             ---------HHHHhcCceEEEEccCcCCCCCCCCcCCCCcHHHHHHHHHHhhcc-CccEEEecCC---ccCCHHHHHHHH
Confidence                     24699999999999531    3344333322  245555555433 4788877532   223467889999


Q ss_pred             HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHH
Q 015826          187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE  266 (399)
Q Consensus       187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~  266 (399)
                      ++|+.+||++..+       ..++..+.++++.|+++|+++.+|+++-.+.                             
T Consensus       211 ~aGA~GfK~~ed~-------g~t~~~I~~aL~vA~~~dv~V~iHtdtlne~-----------------------------  254 (568)
T PRK13985        211 EAGAIGFKIHEDW-------GTTPSAINHALDVADKYDVQVAIHTDTLNEA-----------------------------  254 (568)
T ss_pred             HcCCEEEEECCcc-------CCCHHHHHHHHHHHHHcCCEEEEeCCCCCCc-----------------------------
Confidence            9999999975322       3688999999999999999999999875431                             


Q ss_pred             HHHHHHHHHHhhhccCCCCCCceEEEEcCCCh--hHHHHHHHHHHHCC
Q 015826          267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA--SSSLDLLMEAKTNG  312 (399)
Q Consensus       267 ~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~--~~~l~~i~~ak~~G  312 (399)
                       +..+. .++..       .|..+|++|+...  ..+-++|+-+...+
T Consensus       255 -g~~E~-t~aa~-------~gr~iH~~H~egaggghapdi~~~~~~~n  293 (568)
T PRK13985        255 -GCVED-TMAAI-------AGRTMHTFHTEGAGGGHAPDIIKVAGEHN  293 (568)
T ss_pred             -hhhHH-HHHHh-------cCCeEEEEeccCCCccchhhHHHHcCCCC
Confidence             11122 23332       3888999999753  24566777765443

>cd00375 Urease_alpha Urease alpha-subunit; Urease is a nickel-dependent metalloenzyme that catalyzes the hydrolysis of urea to form ammonia and carbon dioxide

Probab=99.91  E-value=1.3e-22  Score=198.42  Aligned_cols=174  Identities=25%  Similarity=0.322  Sum_probs=134.5

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCC--C-------CCCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP--R-------NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~--~-------~~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      .++++|+|++|++..+...++|.|+||||++|++.....  .       ...+.++||++|++|+|||||+|+|+..|++
T Consensus        64 ~~DlVI~Na~IiD~~gi~~adI~IkdGrIvaIG~agnp~~~~~v~~~~~~g~~teVIDaeG~iV~PG~ID~HvH~~~P~~  143 (567)
T cd00375          64 VLDLVITNALIIDYTGIYKADIGIKDGRIVAIGKAGNPDIMDGVTPNMIVGPSTEVIAGEGKIVTAGGIDTHVHFICPQQ  143 (567)
T ss_pred             cCCEEEECeEEECCCCcEEEEEEEECCEEEEEecCCCccccccccccccCCCCCeEEECCCCEEeeceEECccCCCCccH
Confidence            358999999999987777899999999999998753210  0       0124689999999999999999999977632


Q ss_pred             CCcCchHHHHHHHHcCCeeeeecCcC------CCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHH
Q 015826          113 TEWEGFPSGTKAAAAGGITTLIDMPL------NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL  186 (399)
Q Consensus       113 ~~~e~~~~~~~~al~~GvTtv~d~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  186 (399)
                               .++++++||||+++++.      ++.+.......++..++.+.. ..+++++++..   ..+..+++.+++
T Consensus       144 ---------~~aAlagGVTTvI~~G~gP~~gtnatp~t~g~~~l~~ml~aa~~-~pin~g~~gkg---~~~~l~eL~e~~  210 (567)
T cd00375         144 ---------IEEALASGITTMIGGGTGPAAGTKATTCTPGPWNIKRMLQAADG-LPVNIGFLGKG---NGSSPDALAEQI  210 (567)
T ss_pred             ---------HHHHHcCCCcEEEcCCcCcccccCCCCCCCCHHHHHHHHHHhhc-CCceEEEEecC---ccccHHHHHHHH
Confidence                     47899999999999721      222333456777777777663 45788887532   234567899999


Q ss_pred             HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      ++|+.+||++..+       ..++..+.++++.|+++|+++.+|+++-.
T Consensus       211 ~aGA~GfK~~eD~-------g~t~~~i~~aL~~A~~~dv~VaiHadtln  252 (567)
T cd00375         211 EAGACGLKLHEDW-------GATPAAIDTCLSVADEYDVQVAIHTDTLN  252 (567)
T ss_pred             HcCCEEEEecCCC-------CCCHHHHHHHHHHHHhhCCEEEEECCCCC
Confidence            9999999986432       25889999999999999999999998744

Nickel-dependent ureases are found in bacteria, fungi and plants. Their primary role is to allow the use of external and internally generated urea as a nitrogen source. The enzyme consists of 3 subunits, alpha, beta and gamma, which can be fused and present on a single protein chain and which in turn forms multimers, mainly trimers. The large alpha subunit is the catalytic domain containing an active site with a bi-nickel center complexed by a carbamylated lysine. The beta and gamma subunits play a role in subunit association to form the higher order trimers.

>PRK07228 N-ethylammeline chlorohydrolase; Provisional

Probab=99.91  E-value=1.2e-23  Score=208.55  Aligned_cols=268  Identities=21%  Similarity=0.284  Sum_probs=153.0

Q ss_pred             ccEEEEccEEEcCCC---ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC---CC--
Q 015826           43 NQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR---TE--  114 (399)
Q Consensus        43 ~~~li~n~~vv~~~~---~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~---~~--  114 (399)
                      |+++|+|++|+++++   ..+++|+|+||+|++|++....+   ...++||++|++|||||||+|+|+.....   ..  
T Consensus         1 ~~~~i~~~~vi~~~~~~~~~~g~V~I~dg~I~~vg~~~~~~---~~~~vID~~G~~vlPGlId~H~H~~~~~~~g~~~~~   77 (445)
T PRK07228          1 MTILIKNAGIVTMNAKREIVDGDVLIEDDRIAAVGDRLDLE---DYDDHIDATGKVVIPGLIQGHIHLCQTLFRGIADDL   77 (445)
T ss_pred             CeEEEEccEEEecCCCcEecccEEEEECCEEEEecCCcccC---cCCeEEeCCCCEEecCEEecccCCccccceeccCCC
Confidence            468999999999864   35899999999999999764321   25679999999999999999999975411   10  


Q ss_pred             ----c--------------Cch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc----cCceeEEee
Q 015826          115 ----W--------------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK----RIYVDVGFW  168 (399)
Q Consensus       115 ----~--------------e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~  168 (399)
                          |              ++.    .....+++++||||++|+. +..   .....++...+....    ...++++..
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~L~~GvTtv~d~~-~~~---~~~~~~~a~~~~g~r~~~~~~~~~~~~~  153 (445)
T PRK07228         78 ELLDWLKDRIWPLEAAHDAESMYYSALLGIGELIESGTTTIVDME-SVH---HTDSAFEAAGESGIRAVLGKVMMDYGDD  153 (445)
T ss_pred             CHHHHHHhhhhhhhhhCCHHHHHHHHHHHHHHHHhcCceEEEccc-ccc---ChHHHHHHHHHcCCeEEEecceecCCcC
Confidence                0              011    1234566899999999987 211   112223322222110    111111100


Q ss_pred             --eeeeCCChhhHHHHHHHHHc--CCc--EEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhchhHH
Q 015826          169 --GGLVPENAYNASALEALLNA--GVL--GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSERHV  241 (399)
Q Consensus       169 --~~~~~~~~~~~~~l~~l~~~--G~~--~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~  241 (399)
                        ........+.+++..++++.  |..  .+...+.+.   ....+++++++++++.|+++|+++++|+ ++........
T Consensus       154 ~p~~~~~~~~~~l~~~~~~i~~~~g~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~  230 (445)
T PRK07228        154 VPEGLQEDTEASLAESVRLLEKWHGADNGRIRYAFTPR---FAVSCTEELLRGVRDLADEYGVRIHTHASENRGEIETVE  230 (445)
T ss_pred             CCccccccHHHHHHHHHHHHHHhcCCCCCceEEEEeCC---CCCCCCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHH
Confidence              00000111223444444432  432  232223332   1235789999999999999999999998 4433222111


Q ss_pred             hhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCC--ChhHHHHHHHHHHHCCCCEEEEc
Q 015826          242 KLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS--DASSSLDLLMEAKTNGDSITVET  319 (399)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s--~~~~~l~~i~~ak~~G~~vt~e~  319 (399)
                      ...+             .+       .+..+....        ..+.++.++|.+  +. +.++.+   ++.|+.+  .+
T Consensus       231 ~~~g-------------~~-------~~~~l~~~g--------~~~~~~~l~H~~~~~~-~~~~~~---~~~g~~v--~~  276 (445)
T PRK07228        231 EETG-------------MR-------NIHYLDEVG--------LTGEDLILAHCVWLDE-EEREIL---AETGTHV--TH  276 (445)
T ss_pred             HHhC-------------CC-------HHHHHHHCC--------CCCCCcEEEEEecCCH-HHHHHH---HHcCCeE--EE
Confidence            1111             00       111111111        125567777776  33 555555   5556554  47


Q ss_pred             cccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCC
Q 015826          320 CPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTV  373 (399)
Q Consensus       320 ~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~  373 (399)
                      ||..     +.        ..      ......+++.++.|...++|||+.+++
T Consensus       277 ~P~~-----~~--------~~------~~~~~p~~~~~~~Gv~v~lGtD~~~~~  311 (445)
T PRK07228        277 CPSS-----NL--------KL------ASGIAPVPDLLERGINVALGADGAPCN  311 (445)
T ss_pred             ChHH-----hh--------hc------ccccCcHHHHHHCCCeEEEcCCCCccC
Confidence            8851     00        00      112345888999999999999998764

>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid

Probab=99.91  E-value=1.8e-22  Score=196.75  Aligned_cols=112  Identities=23%  Similarity=0.318  Sum_probs=79.8

Q ss_pred             EEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC---CcCchHHH
Q 015826           45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---EWEGFPSG  121 (399)
Q Consensus        45 ~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~---~~e~~~~~  121 (399)
                      ++|+|++|++++...+++|+|+||+|++|++....+ ...+.++||++|++|||||||+|+|+...+..   ...+....
T Consensus         2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~v~~~~~~~-~~~~~~~id~~g~~v~PG~id~H~H~~~~~~~~~~~~~~~~~~   80 (387)
T cd01308           2 TLIKNAEVYAPEYLGKKDILIAGGKILAIEDQLNLP-GYENVTVVDLHGKILVPGFIDQHVHIIGGGGEGGPSTRTPEVT   80 (387)
T ss_pred             EEEECcEEeCCCCccceEEEEECCEEEEEeCCcccc-cCCCCeEEECCCCEEccCeeehhhCcccccCCCcccccCHHHH
Confidence            479999999977666889999999999999764322 12356899999999999999999999753211   11223345


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE  158 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~  158 (399)
                      ..+++++|+||++|++ +..+.....+.+....+.+.
T Consensus        81 ~~~~~~~G~tt~~d~~-~~~~~~~~~~~~~~~~~~~~  116 (387)
T cd01308          81 LSDLTTAGVTTVVGCL-GTDGISRSMEDLLAKARALE  116 (387)
T ss_pred             HHHHHhCCceEEecCc-CCCCCCCCHHHHHHHHHHHH
Confidence            5688999999999997 33333334454444444433

Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.

>PRK13309 ureC urease subunit alpha; Reviewed

Probab=99.90  E-value=6.1e-22  Score=195.60  Aligned_cols=174  Identities=24%  Similarity=0.282  Sum_probs=130.0

Q ss_pred             CccEEEEccEEEcC-CCceeeEEEEECCEEEEeccCCCCC--C-------CCCCCcEEeCCCCEEecceeecccccCCCC
Q 015826           42 YNQYWLTSKRIVTP-KGVISGAVEIKEGNIISIVSEEDWP--R-------NSKTGQVVDYGEAVIMPGLIDVHAHLDDPG  111 (399)
Q Consensus        42 ~~~~li~n~~vv~~-~~~~~~~V~I~dG~I~~Ig~~~~~~--~-------~~~~~~vID~~G~~vlPGlID~H~H~~~~~  111 (399)
                      ..+++|+|++|+|+ .+...++|.|+||||++|++.....  .       ...+.++||++|++|+|||||+|+|+..|+
T Consensus        67 ~~DlVI~Ng~ViD~~~gi~kaDI~IkdGrI~aIG~~~~p~~~~~v~~~~~~g~~tevIDa~G~iVtPG~ID~HvH~~~P~  146 (572)
T PRK13309         67 VLDLVITNVTIVDARLGVIKADVGIRDGKIVGIGKSGNPSTMDGVTQGMVVGVSTDAISGEHLILTAAGIDTHIHLISPQ  146 (572)
T ss_pred             cCCEEEECeEEEcCCCCEEEEEEEEECCEEEEecCCCccccccccccccccCCCceEEECCCCEEEeCEEEeecccCCcc
Confidence            46899999999996 4566899999999999998743211  0       001368999999999999999999998764


Q ss_pred             CCCcCchHHHHHHHHcCCeeeeecCcC------CCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHH
Q 015826          112 RTEWEGFPSGTKAAAAGGITTLIDMPL------NSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL  185 (399)
Q Consensus       112 ~~~~e~~~~~~~~al~~GvTtv~d~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  185 (399)
                      +         .++++.+||||+++++.      +..+.......++..++.+.. ..+++++++..   .....+++.++
T Consensus       147 ~---------~~aAl~gGVTTvi~~G~gp~~~~n~~~~t~g~~~i~~~l~~a~~-~pvn~g~~gkg---~~~~~~~l~el  213 (572)
T PRK13309        147 Q---------AYHALSNGVTTFFGGGIGPTDGTNGTTVTPGPWNIRQMLRSIEG-LPVNVGILGKG---NSYGRGPLLEQ  213 (572)
T ss_pred             h---------HHHHHcCceEEEEecCCCCccCCCCCCCCCCHHHHHHHHHHhcc-CCcCEEEEcCC---CCCCHHHHHHH
Confidence            2         36899999999997531      222223345567777666653 35788877532   21234678888


Q ss_pred             HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       186 ~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      +++|+.+||++..+       ..+++.+.+++++|+++|+++.+|+++-.
T Consensus       214 ~~aGa~gfk~~~d~-------g~t~~~L~~aLe~A~~~gv~VaiH~d~ln  256 (572)
T PRK13309        214 AIAGVAGYKVHEDW-------GATAAALRHALRVADEVDIQVAVHTDSLN  256 (572)
T ss_pred             HhcCcEEEEecCcC-------CcCHHHHHHHHHHHHhcCCEEEEeCCccc
Confidence            89999999986432       24889999999999999999999998643

>TIGR01792 urease_alph urease, alpha subunit

Probab=99.89  E-value=9.7e-22  Score=193.98  Aligned_cols=174  Identities=24%  Similarity=0.307  Sum_probs=126.1

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCC--CC-----CCCCcEEeCCCCEEecceeecccccCCCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP--RN-----SKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE  114 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~--~~-----~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~  114 (399)
                      .++++|+|++|+|..+...++|+|+||||++|++.....  ..     ..+.++||++|++|+|||||+|+|+..++   
T Consensus        65 ~MDlVIkNg~VID~~gi~kaDI~IkDGrIaaIG~~~~p~~~~~v~~~~~~~tEVIDa~GkIV~PGlIDtHvH~~~P~---  141 (567)
T TIGR01792        65 VLDLVITNALILDWTGIYKADIGIKNGRIVGIGKAGNPDTMDGVDMIVGASTEAISGEGKIVTAGGIDTHVHYISPQ---  141 (567)
T ss_pred             cCcEEEECeEEECCCCeEEEEEEEECCEEEEEcCCCcccccccccccCCCCCeEEECCCCEEEECeEEeecCCCCcc---
Confidence            468999999999977767899999999999998753211  00     02468999999999999999999996652   


Q ss_pred             cCchHHHHHHHHcCCeeeeecCcC----CCCCCCCcHHHH--HHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHc
Q 015826          115 WEGFPSGTKAAAAGGITTLIDMPL----NSDPSTISTETL--KLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNA  188 (399)
Q Consensus       115 ~e~~~~~~~~al~~GvTtv~d~~~----~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~  188 (399)
                            ..+.++.+||||+++++.    ++.+...+...+  ....+... ...+++++++..   .....+++++++++
T Consensus       142 ------~~~aAl~gGVTTmI~~Gtgp~~~t~pTt~t~~~~~~~~~l~aa~-~~~in~g~~g~g---~~~~~~~L~e~i~a  211 (567)
T TIGR01792       142 ------QVQAALDNGITTLIGGGTGPADGTNATTCTPGPWYLHRMLQAAD-GLPINFGFTGKG---SGSGPAALIEQIEA  211 (567)
T ss_pred             ------HHHHHHhCceEEEecCCCccccCCCCcccccchhhHHHHHHHhc-cCCccEEEEeCC---ccchHHHHHHHHHc
Confidence                  368899999999999542    222322222222  22333333 345677665321   12245678888889


Q ss_pred             CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      |+.+||.+..+       .++++.+++++++|+++|+++++|+++..
T Consensus       212 Ga~gfK~h~~y-------~~s~e~L~~al~~A~e~gv~V~iH~ET~~  251 (567)
T TIGR01792       212 GACGLKVHEDW-------GATPAAIDNALSVADEYDVQVAVHTDTLN  251 (567)
T ss_pred             CCcEEEeCCCC-------CCCHHHHHHHHHHHHHcCCEEEEeCCCcc
Confidence            99999976432       47899999999999999999999996644

This model describes the urease alpha subunit UreC (designated beta or B chain, UreB in Helicobacter species). Accessory proteins for incorporation of the nickel cofactor are usually found in addition to the urease alpha, beta, and gamma subunits. The trusted cutoff is set above the scores of many reported fragments and of a putative second urease alpha chain in Streptomyces coelicolor.

>cd01298 ATZ_TRZ_like TRZ/ATZ family contains enzymes from the atrazine degradation pathway and related hydrolases

Probab=99.88  E-value=2.7e-21  Score=190.12  Aligned_cols=266  Identities=20%  Similarity=0.239  Sum_probs=153.8

Q ss_pred             EEEEccEEEcCCC---ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC---CCC-----
Q 015826           45 YWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRT-----  113 (399)
Q Consensus        45 ~li~n~~vv~~~~---~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~~-----  113 (399)
                      ++|+|++|+++++   ..+++|+|+||||++|++..+.+. +++.++||++|++|+|||||+|+|+..+   +..     
T Consensus         1 ~~i~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~~-~~~~~viD~~g~~i~PGlid~H~Hl~~~~~~~~~~~~~~   79 (411)
T cd01298           1 ILIRNGTIVTTDPRRVLEDGDVLVEDGRIVAVGPALPLPA-YPADEVIDAKGKVVMPGLVNTHTHLAMTLLRGLADDLPL   79 (411)
T ss_pred             CeEEeeEEEEeCCcceeecceEEEECCEEEEecCcccccc-CCcCeEEeCCCCEEccCccccccchhhHHhhcccCCCCH
Confidence            4799999999753   357999999999999997644321 1356899999999999999999998643   110     


Q ss_pred             ---------------CcCchHH----HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeC-
Q 015826          114 ---------------EWEGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-  173 (399)
Q Consensus       114 ---------------~~e~~~~----~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  173 (399)
                                     +.++++.    .+..++++||||++++. +..+     +...+..+....+..+.+... .... 
T Consensus        80 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~-----~~~~~~~~~~g~r~~~~~~~~-~~~~~  152 (411)
T cd01298          80 MEWLKDLIWPLERLLTEEDVYLGALLALAEMIRSGTTTFADMY-FFYP-----DAVAEAAEELGIRAVLGRGIM-DLGTE  152 (411)
T ss_pred             HHHHHhhhhhhhhcCCHHHHHHHHHHHHHHHHhcCccEEECcc-ccch-----HHHHHHHHHhCCeEEEEccee-cCCCc
Confidence                           1122222    23456789999999987 2211     122111111111111111111 0010 


Q ss_pred             ---CChhhHHHHHHHH----HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhchhHHhhcc
Q 015826          174 ---ENAYNASALEALL----NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSERHVKLED  245 (399)
Q Consensus       174 ---~~~~~~~~l~~l~----~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~~~~~  245 (399)
                         ......+++.+++    ..|...+|+++.+..   ...+++++++++++.|+++|+++.+|+ ++...........+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~  229 (411)
T cd01298         153 DVEETEEALAEAERLIREWHGAADGRIRVALAPHA---PYTCSDELLREVAELAREYGVPLHIHLAETEDEVEESLEKYG  229 (411)
T ss_pred             ccccHHHHHHHHHHHHHHhcCCCCCceEEEEeCCC---CccCCHHHHHHHHHHHHHcCCcEEEEecCCHHHHHHHHHHhC
Confidence               1112234444444    335677888776542   124689999999999999999999996 44332221111110


Q ss_pred             CcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccc
Q 015826          246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA  325 (399)
Q Consensus       246 ~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~  325 (399)
                                    .      ..+..+.+..        ..+.++.+.|.+..  +-+.++..++.|  +++.+||++-.
T Consensus       230 --------------~------~~~~~~~~~~--------~~~~~~~i~H~~~l--~~~~~~~l~~~g--i~~~~~p~~~~  277 (411)
T cd01298         230 --------------K------RPVEYLEELG--------LLGPDVVLAHCVWL--TDEEIELLAETG--TGVAHNPASNM  277 (411)
T ss_pred             --------------C------CHHHHHHHcC--------CCCCCeEEEEecCC--CHHHHHHHHHcC--CeEEEChHHhh
Confidence                          0      0111111111        12456667776643  123455666666  56678886311


Q ss_pred             cccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCC
Q 015826          326 FSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT  372 (399)
Q Consensus       326 ~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~  372 (399)
                      .    +   +.   ..+|         +++.++.|...++|||+.+.
T Consensus       278 ~----~---~~---~~~~---------~~~~~~~Gv~~~~GsD~~~~  305 (411)
T cd01298         278 K----L---AS---GIAP---------VPEMLEAGVNVGLGTDGAAS  305 (411)
T ss_pred             h----h---hh---CCCC---------HHHHHHCCCcEEEeCCCCcc
Confidence            0    0   10   1222         56778899999999998753

Atrazine, a chlorinated herbizide, can be catabolized by a variety of different bacteria. The first three steps of the atrazine dehalogenation pathway are catalyzed by atrazine chlorohydrolase (AtzA), hydroxyatrazine ethylaminohydrolase (AtzB), and N-isopropylammelide N-isopropylaminohydrolase (AtzC). All three enzymes belong to the superfamily of metal dependent hydrolases. AtzA and AtzB, beside other related enzymes are represented in this CD.

>PRK15493 5-methylthioadenosine/S-adenosylhomocysteine deaminase; Provisional

Probab=99.87  E-value=2.6e-20  Score=183.70  Aligned_cols=186  Identities=18%  Similarity=0.224  Sum_probs=111.7

Q ss_pred             ccEEEEccEEEcCCC---c-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC-----
Q 015826           43 NQYWLTSKRIVTPKG---V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-----  113 (399)
Q Consensus        43 ~~~li~n~~vv~~~~---~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-----  113 (399)
                      ++++|+|+.|++++.   . .+++|+|+||+|++||+..... .+++.++||++|++|||||||+|+|+.+..+.     
T Consensus         1 ~~~li~~~~v~t~~~~~~~~~~g~V~i~~g~I~~vg~~~~~~-~~~~~~viD~~g~~i~PGlVn~H~H~~~~~~rg~~~~   79 (435)
T PRK15493          1 MKTTYVNATIVTMNEQNEVIENGYIIVENDQIIDVNSGEFAS-DFEVDEVIDMKGKWVLPGLVNTHTHVVMSLLRGIGDD   79 (435)
T ss_pred             CeEEEEccEEEEeCCCCcEecCcEEEEECCEEEEEcCccccc-cCCCCeEEeCCCCEEccceeecccCccchhhhccCCC
Confidence            368999999997654   2 4789999999999999853221 12356899999999999999999999654111     


Q ss_pred             ----Cc--------------Cch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeee-e
Q 015826          114 ----EW--------------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG-G  170 (399)
Q Consensus       114 ----~~--------------e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  170 (399)
                          .|              ++.    ..+..+++++||||++|+.. ...  ...+.+.+..+...-+..+....+. +
T Consensus        80 ~~l~~wl~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~~-~~~--~~~~~~~~a~~~~GiR~~~~~~~~~~~  156 (435)
T PRK15493         80 MLLQPWLETRIWPLESQFTPELAVASTELGLLEMVKSGTTSFSDMFN-PIG--VDQDAIMETVSRSGMRAAVSRTLFSFG  156 (435)
T ss_pred             CCHHHHHHhchhhchhcCCHHHHHHHHHHHHHHHHhCCccEEEcccc-ccc--cCHHHHHHHHHHcCCcEEEeeeecCCC
Confidence                00              111    12356679999999999862 111  1122222222221112211111111 0


Q ss_pred             eeCCChhhHHHHHHHHHc--C-CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChh
Q 015826          171 LVPENAYNASALEALLNA--G-VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEK  235 (399)
Q Consensus       171 ~~~~~~~~~~~l~~l~~~--G-~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~  235 (399)
                      .........++..++++.  + ...++..+.++.   ...++++.++++++.|+++|+++++|+ |+..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~t~s~e~l~~~~~~A~~~g~~v~~H~~e~~~  222 (435)
T PRK15493        157 TKEDEKKAIEEAEKYVKRYYNESGMLTTMVAPHS---PYTCSTELLEECARIAVENQTMVHIHLSETER  222 (435)
T ss_pred             CCccHHHHHHHHHHHHHHhcCCCCCeEEEEeCCC---CCcCCHHHHHHHHHHHHHcCCcEEEEeCCCHH
Confidence            011111223333333321  1 233566555542   235799999999999999999999997 4433

>PRK06687 chlorohydrolase; Validated

Probab=99.87  E-value=2.7e-20  Score=183.25  Aligned_cols=180  Identities=18%  Similarity=0.221  Sum_probs=112.5

Q ss_pred             EEEEccEEEcCCCc----eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC---C---
Q 015826           45 YWLTSKRIVTPKGV----ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---E---  114 (399)
Q Consensus        45 ~li~n~~vv~~~~~----~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~---~---  114 (399)
                      .+|+|+.|+++++.    .+++|+|+||+|++|++..+... ....++||++|++|||||||+|+|+.+....   .   
T Consensus         2 ~~~~n~~vvt~d~~~~~~~~g~VlV~~g~I~aVg~~~~~~~-~~~~~viD~~g~~v~PGlIn~H~H~~~~~~rg~~~~~~   80 (419)
T PRK06687          2 KVFQHVNIVTCDQDFHVYLDGILAVKDSQIVYVGQDKPAFL-EQAEQIIDYQGAWIMPGLVNCHTHSAMTGLRGIRDDSN   80 (419)
T ss_pred             cceEeeEEEEeCCCceEecCcEEEEECCEEEEecCcccccc-cccCeEEeCCCCEEccceeeeccCCCccccccccCCCC
Confidence            46999999987762    36899999999999998543211 1246799999999999999999999765321   0   


Q ss_pred             -----------c------CchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEee--eee
Q 015826          115 -----------W------EGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW--GGL  171 (399)
Q Consensus       115 -----------~------e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~  171 (399)
                                 .      ++.+    ....+++++||||++|+. +..+ ......++...+.   .....++..  ...
T Consensus        81 ~~~wl~~~~~~~~~~~~~~~~~~~~~~a~~e~l~~GvTTv~d~~-~~~~-~~~~~~~~a~~~~---Gir~~~~~~~~~~~  155 (419)
T PRK06687         81 LHEWLNDYIWPAESEFTPDMTTNAVKEALTEMLQSGTTTFNDMY-NPNG-VDIQQIYQVVKTS---KMRCYFSPTLFSSE  155 (419)
T ss_pred             HHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCcceeehhh-cccc-ccHHHHHHHHHHh---CCceEeccccccCC
Confidence                       0      1122    234556999999999986 2211 1112222222211   112222221  111


Q ss_pred             eCCChhhHHHHHHHHH----cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          172 VPENAYNASALEALLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       172 ~~~~~~~~~~l~~l~~----~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .....+..++.+++++    .+...++..++++.   ...++++.++++++.|+++|+++++|+..
T Consensus       156 ~~~~~~~~~~~~~~i~~~~~~~~~~i~~~~~~~~---~~~~s~e~l~~~~~~A~~~g~~i~~H~~e  218 (419)
T PRK06687        156 TETTAETISRTRSIIDEILKYKNPNFKVMVAPHS---PYSCSRDLLEASLEMAKELNIPLHVHVAE  218 (419)
T ss_pred             cccHHHHHHHHHHHHHHHhccCCCceEEEEeCCC---CCCCCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence            1111222333444432    33344777776642   24689999999999999999999999743

>cd01293 Bact_CD Bacterial cytosine deaminase and related metal-dependent hydrolases

Probab=99.85  E-value=2.5e-19  Score=175.29  Aligned_cols=268  Identities=17%  Similarity=0.181  Sum_probs=155.3

Q ss_pred             EEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC---CCC----------
Q 015826           47 LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRT----------  113 (399)
Q Consensus        47 i~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~~----------  113 (399)
                      |+|++|+|+. ..+++|+|+||+|++|++..+.+   ++.++||++|++|||||||+|+|+.+.   +..          
T Consensus         2 ~~~~~~~~~~-~~~~~v~I~~g~I~~Vg~~~~~~---~~~~vID~~g~~v~PGlId~H~H~~~~~~~~~~~~~~~~~~~~   77 (398)
T cd01293           2 LRNARLADGG-TALVDIAIEDGRIAAIGPALAVP---PDAEEVDAKGRLVLPAFVDPHIHLDKTFTGGRWPNNSGGTLLE   77 (398)
T ss_pred             eeeeEEeCCC-ceEEEEEEECCEEEEEecCCCCC---CCCceEeCCCCEEccCEeeeeeccCcccccCCCCCCCccccHH
Confidence            7899999974 46789999999999999865422   367899999999999999999999753   110          


Q ss_pred             ------------CcCch----HHHHHHHHcCCeeeeecCcCCCCCCC--CcHHHHHHHHHHHhccCceeEEeeeeeeC--
Q 015826          114 ------------EWEGF----PSGTKAAAAGGITTLIDMPLNSDPST--ISTETLKLKVDAAEKRIYVDVGFWGGLVP--  173 (399)
Q Consensus       114 ------------~~e~~----~~~~~~al~~GvTtv~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  173 (399)
                                  +.++.    ......++++||||++++.. ..+..  ...+.+.+..+.....  +.+... .+..  
T Consensus        78 ~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~GvTtv~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~  153 (398)
T cd01293          78 AIIAWEERKLLLTAEDVKERAERALELAIAHGTTAIRTHVD-VDPAAGLKALEALLELREEWADL--IDLQIV-AFPQHG  153 (398)
T ss_pred             HHHHHHHHHhccChHHHHHHHHHHHHHHHHcChhheeeeec-ccccccchHHHHHHHHHHHhhcc--ceEEEE-eccCcc
Confidence                        00111    23356779999999988752 11210  1122222222222211  111111 1111  


Q ss_pred             --CChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCch
Q 015826          174 --ENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR  251 (399)
Q Consensus       174 --~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~  251 (399)
                        ...+..+.+++..+.|+..++.+ .+.   ....+++++++++++.|+++|+++++|+......             .
T Consensus       154 ~~~~~~~~~~v~~~~~~g~~~~~~~-~~~---~~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~~~-------------~  216 (398)
T cd01293         154 LLSTPGGEELMREALKMGADVVGGI-PPA---EIDEDGEESLDTLFELAQEHGLDIDLHLDETDDP-------------G  216 (398)
T ss_pred             ccCCCCHHHHHHHHHHhCCCEEeCC-CCC---cCCccHHHHHHHHHHHHHHhCCCCEEEeCCCCCc-------------c
Confidence              11234566777777776433321 111   1135688999999999999999999998543210             0


Q ss_pred             hhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh-----hHHHHHHHHHHHCCCCEEEEcccccccc
Q 015826          252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLMEAKTNGDSITVETCPHYLAF  326 (399)
Q Consensus       252 ~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-----~~~l~~i~~ak~~G~~vt~e~~p~~L~~  326 (399)
                                    ...+.+.++.+++.+.     ..++.+.|....     .+..+.++..+++|+.++  .||..-..
T Consensus       217 --------------~~~~~~~~~~~~~~g~-----~~~~~i~H~~~~~~~~~~~~~~~~~~l~~~g~~v~--~~p~s~~~  275 (398)
T cd01293         217 --------------SRTLEELAEEAERRGM-----QGRVTCSHATALGSLPEAEVSRLADLLAEAGISVV--SLPPINLY  275 (398)
T ss_pred             --------------hhHHHHHHHHHHHhCC-----CCCEEeeecchhhcCCHHHHHHHHHHHHHcCCeEE--eCCCcchh
Confidence                          0122333444444311     124677886532     123467888888887654  45531110


Q ss_pred             ccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          327 SAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       327 ~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                      .... .      ...|.   ......+.+.++.|....+|||..
T Consensus       276 l~~~-~------~~~~~---~~~~~~~~~~~~~Gv~v~lGTD~~  309 (398)
T cd01293         276 LQGR-E------DTTPK---RRGVTPVKELRAAGVNVALGSDNV  309 (398)
T ss_pred             hccc-c------cCCCC---CCCCCcHHHHHHCCCeEEECCCCC
Confidence            0000 0      00111   112345677788999999999984

Cytosine deaminases (CDs) catalyze the deamination of cytosine, producing uracil and ammonia. They play an important role in pyrimidine salvage. CDs are present in prokaryotes and fungi, but not mammalian cells. The bacterial enzymes, but not the fungal enzymes, are related to the adenosine deaminases (ADA). The bacterial enzymes are iron dependent and hexameric.

>PLN02303 urease

Probab=99.85  E-value=5.9e-20  Score=185.51  Aligned_cols=174  Identities=24%  Similarity=0.314  Sum_probs=129.1

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCC--CCC-------CCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDW--PRN-------SKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~--~~~-------~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      ..+++|+|++|+|..+...++|+|+||||++|++....  ...       ..+.++||++|++|+|||||+|+|+..|++
T Consensus       333 ~~DlVItNa~IID~~Gi~kaDI~IkDGrIvaIGkagnp~i~~gv~~~~~~g~~teVIDAeGlIVtPG~ID~HVHf~~Pg~  412 (837)
T PLN02303        333 SLDTVITNAVIIDYTGIYKADIGIKDGLIVGIGKAGNPDVMDGVTSNMIVGVNTEVIAGEGMIVTAGGIDCHVHFICPQL  412 (837)
T ss_pred             cCCEEEeCeEEECCCCcEEeEEEEECCEEEEecCCCCcccccccccccccCCCCeEEECCCCEEEeCEEEeecCCCCCcH
Confidence            46899999999997777789999999999999974211  000       024689999999999999999999986642


Q ss_pred             CCcCchHHHHHHHHcCCeeeeecCcC----CCCCCC--CcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHH
Q 015826          113 TEWEGFPSGTKAAAAGGITTLIDMPL----NSDPST--ISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL  186 (399)
Q Consensus       113 ~~~e~~~~~~~~al~~GvTtv~d~~~----~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  186 (399)
                               .+.++.+|+||+++++.    ++.+..  ...+.++.+++... ...+++++++..   .....+++++++
T Consensus       413 ---------~~eaLasGVTTai~GGtgp~pnT~ptt~t~g~e~I~~~L~aa~-~~pvn~Gf~gkG---~~s~l~eL~eli  479 (837)
T PLN02303        413 ---------ATEAIASGITTLVGGGTGPAHGTCATTCTPAPSHMKLMLQSTD-DLPLNFGFTGKG---NTAKPEGLHEII  479 (837)
T ss_pred             ---------HHHHHHHhHHHHHhcCCCCCCcccCcCCCCCHHHHHHHHHhcc-cCCCcEEEEccC---cccCHHHHHHHH
Confidence                     25666777777776642    223333  24677777776543 345788877532   223467888888


Q ss_pred             HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      +.|+.+||.+..+       ..+++.+.+++++|+++|+++++|+|+..
T Consensus       480 eaGa~GfK~h~d~-------gvTpelL~raLe~AkelGVpVaIHAEdLn  521 (837)
T PLN02303        480 KAGAMGLKLHEDW-------GTTPAAIDNCLDVAEEYDIQVTIHTDTLN  521 (837)
T ss_pred             HcCcEEEEECCCC-------CCCHHHHHHHHHHHHHcCCEEEEecCccc
Confidence            9999999976321       36789999999999999999999998843

>TIGR01975 isoAsp_dipep isoaspartyl dipeptidase IadA

Probab=99.84  E-value=6.3e-19  Score=169.97  Aligned_cols=264  Identities=19%  Similarity=0.209  Sum_probs=153.5

Q ss_pred             EEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCc-EEeCCCCEEecceeecccccCCCCCCC---cCchHH
Q 015826           45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQ-VVDYGEAVIMPGLIDVHAHLDDPGRTE---WEGFPS  120 (399)
Q Consensus        45 ~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~-vID~~G~~vlPGlID~H~H~~~~~~~~---~e~~~~  120 (399)
                      ++|+|++|++++.....+|+|+||||++|++..+......+.+ ++|++|++|+|||||+|+|+...+...   ...-..
T Consensus         2 ~li~n~~v~~~~~~~~~dvlI~~gkI~~Ig~~~~~~~~~~~~~~i~d~~G~~v~PGlID~HvH~~~gg~~~~~~~~~~e~   81 (389)
T TIGR01975         2 TLLKGAEVYAPEYIGKKDILIANDKIIAIADEIPSTKDFVPNCVVVGLEGMIAVPGFIDQHVHIIGGGGEGGPTTRTPEL   81 (389)
T ss_pred             EEEECcEEEcCCcCcceeEEEECCEEEEEcCCccccccCCCCeEEECCCCCEEccCEeehhhccccccccCCCccCCHHH
Confidence            5799999999876567899999999999998654321111234 556699999999999999987542111   122234


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeee-C---CChhhHHHHHHHHHcCCcEEE-E
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-P---ENAYNASALEALLNAGVLGLK-S  195 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~l~~l~~~G~~~ik-~  195 (399)
                      .+.+++++||||++++. ++.......+.+....+.....+.-.+...+... +   -+......+..  ..-+.|+| +
T Consensus        82 ~~~e~l~~GvTTv~d~~-g~~~~~~~~~~~~a~~~al~~~Gir~~~~~g~~~~p~~t~t~~~~~d~~~--~d~iiG~~~i  158 (389)
T TIGR01975        82 TLSDITKGGVTTVVGLL-GTDGITRHMESLLAKARALEEEGISCYMLTGAYHVPSRTITGSVESDLLL--IDKVIGVGEI  158 (389)
T ss_pred             HHHHHHhCCcEEEecCc-ccCccccChhhHHHHHHHHHHhCCEEEEEcccccCCCcccccchhhheee--ehhhcccceE
Confidence            57788999999999987 4433333444333344444332222222221110 0   01111111211  22345664 6


Q ss_pred             eecCCCCCCCCCCCHHHHHHHHHHHHhcC----CC--EEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHH
Q 015826          196 FMCPSGINDFPMTNASHIKEGLSVLARYK----RP--LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAI  269 (399)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~~~~~~a~~~g----~~--v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v  269 (399)
                      -++.+-   ....+.++|+++.+.++..|    ++  +++|.-+...                               .+
T Consensus       159 a~sd~r---~~~~~~~~l~~~~~~~~~~g~~~~~~g~~~vH~g~~~~-------------------------------~l  204 (389)
T TIGR01975       159 AISDHR---SAQPTVEHLTNMAAEARVGGLLGGKPGIVNFHVGDSKR-------------------------------AL  204 (389)
T ss_pred             EEccCc---CCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCchh-------------------------------hH
Confidence            555432   23468899999999999988    88  9999865432                               34


Q ss_pred             HHHHHHHhhhccCCCCCCceEEEEcCC---ChhHHHHHHHHHHHCCCCEEEE--ccccccccccccCCCCCcceEEcCCC
Q 015826          270 RELLTVAKDTRTDGPAEGAHLHIVHLS---DASSSLDLLMEAKTNGDSITVE--TCPHYLAFSAEEIPDGDTRFKCAPPI  344 (399)
Q Consensus       270 ~~~~~~a~~~~~~~~~~g~~vhi~H~s---~~~~~l~~i~~ak~~G~~vt~e--~~p~~L~~~~~~~~~~~~~~~~~Ppl  344 (399)
                      ..+.++.++.       +++.|+-|-+   ...+-++...++.++|..+-..  .+|.+|       .        ..  
T Consensus       205 ~~l~~~~~~~-------di~~~~f~pth~~r~~~l~~~~i~~~~~gg~iDv~~~~~~~~l-------~--------~~--  260 (389)
T TIGR01975       205 QPIYELVENT-------DVPITQFLPTHINRNVPLFEAGLEFAKKGGTIDLTSSIDPQFR-------K--------EG--  260 (389)
T ss_pred             HHHHHHHHhc-------CCChhheecCccCCCHHHHHHHHHHHHhCCcEEEeCCCCccch-------h--------cc--
Confidence            5566666654       6666655443   2213444444445555432222  111100       0        00  


Q ss_pred             CChhhHHHHHHHHhcCCc-c--EEeCCCC
Q 015826          345 RDAANKEKLWEALMDGHI-D--MLSSDHS  370 (399)
Q Consensus       345 r~~~~~~~l~~~l~~G~i-d--~i~sdh~  370 (399)
                       +....+.+.++++.|.. |  +++||..
T Consensus       261 -~~~~~~~~~~~~~~Gv~~~~i~isSD~~  288 (389)
T TIGR01975       261 -EVAPAEGIKKALEAGVPLEKVTFSSDGN  288 (389)
T ss_pred             -ccChHHHHHHHHHcCCCcceEEEEeCCC
Confidence             11234567888889964 4  9999974

The L-isoaspartyl derivative of Asp arises non-enzymatically over time as a form of protein damage. In this isomerization, the connectivity of the polypeptide changes to pass through the beta-carboxyl of the side chain. Much but not all of this damage can be repaired by protein-L-isoaspartate (D-aspartate) O-methyltransferase. This model describes the isoaspartyl dipeptidase IadA, apparently one of two such enzymes in E. coli, an enzyme that degrades isoaspartyl dipeptides and may unblock degradation of proteins that cannot be repaired. This model also describes closely related proteins from other species (e.g. Clostridium perfringens, Thermoanaerobacter tengcongensis) that we assume to be equivalent in function. This family shows homology to dihydroorotases.

>PRK09045 N-ethylammeline chlorohydrolase; Provisional

Probab=99.84  E-value=2.8e-19  Score=177.18  Aligned_cols=179  Identities=17%  Similarity=0.205  Sum_probs=110.4

Q ss_pred             ccEEEEccEEEcCCC---c-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC---CCC-
Q 015826           43 NQYWLTSKRIVTPKG---V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG---RTE-  114 (399)
Q Consensus        43 ~~~li~n~~vv~~~~---~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~---~~~-  114 (399)
                      .+++|+|+.|++++.   . .+++|+|+||+|++|++.......+++.++||++|++|||||||+|+|+.+..   ... 
T Consensus         7 ~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~~~~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~g~~~~   86 (443)
T PRK09045          7 VDLLIEARWIVPVEPAGVVLEDHAVAIRDGRIVAILPRAEARARYAAAETVELPDHVLIPGLINAHTHAAMSLLRGLADD   86 (443)
T ss_pred             ccEEEEccEEEEeCCCceEeeccEEEEECCEEEEecCcccccccCCcceEEeCCCCEEecCEeccccChhhHhhhhccCC
Confidence            589999999998763   2 47899999999999998643322223568999999999999999999986531   100 


Q ss_pred             --------------------cCc----hHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeee
Q 015826          115 --------------------WEG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG  170 (399)
Q Consensus       115 --------------------~e~----~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (399)
                                          .+.    ......+++++||||++|+..  .+    ...++...+.. -+..+..... .
T Consensus        87 ~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~G~Ttv~d~~~--~~----~~~~~~~~~~G-~R~~~~~~~~-~  158 (443)
T PRK09045         87 LPLMTWLQDHIWPAEGAWVSEEFVRDGTLLAIAEMLRGGTTCFNDMYF--FP----EAAAEAAHQAG-MRAQIGMPVL-D  158 (443)
T ss_pred             CCHHHHHHhhhhhhhhccCCHHHHHHHHHHHHHHHHhcCCcEEEeccc--cH----HHHHHHHHHcC-CeEEEecccc-c
Confidence                                001    112345678999999998752  11    11111111111 1111111110 0


Q ss_pred             ee----CCChhhHHHHHHHHH--cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015826          171 LV----PENAYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE  232 (399)
Q Consensus       171 ~~----~~~~~~~~~l~~l~~--~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~  232 (399)
                      ..    ....+.+++..++.+  .+...++..+.+..   ...++++.++++++.|+++|+++.+|+.
T Consensus       159 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~~  223 (443)
T PRK09045        159 FPTAWASDADEYLAKGLELHDQWRHHPLISTAFAPHA---PYTVSDENLERIRTLAEQLDLPIHIHLH  223 (443)
T ss_pred             CCCccccCHHHHHHHHHHHHHHhcCCCcEEEEEeCCC---CCCCCHHHHHHHHHHHHHcCCCEEEeec
Confidence            00    011122222223322  24556777766542   2367899999999999999999999984

>PRK07203 putative chlorohydrolase/aminohydrolase; Validated

Probab=99.84  E-value=4.6e-19  Score=175.59  Aligned_cols=186  Identities=17%  Similarity=0.136  Sum_probs=106.8

Q ss_pred             EEEEccEEEcCCC---c-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC------
Q 015826           45 YWLTSKRIVTPKG---V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE------  114 (399)
Q Consensus        45 ~li~n~~vv~~~~---~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~------  114 (399)
                      ++|+|++|++.++   . .+++|+|+||+|++|++........++.++||++|++|+|||||+|+|+.+..+..      
T Consensus         2 ~li~~~~i~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~~~~~~~viD~~g~lv~PGfID~H~H~~~~~~rg~~~~~~   81 (442)
T PRK07203          2 LLIGNGTAITRDPAKPVIEDGAIAIEGNVIVEIGTTDELKAKYPDAEFIDAKGKLIMPGLINSHNHIYSGLARGMMANIP   81 (442)
T ss_pred             EEEECCEEEeCCCCCceeeccEEEEECCEEEEEeCchhhccccCCCeEEeCCCCEEecceeeccccchhhhhcccccccC
Confidence            5799999997543   2 36899999999999996432211113557999999999999999999986431100      


Q ss_pred             ---------------------cCchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc---cCceeEE
Q 015826          115 ---------------------WEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK---RIYVDVG  166 (399)
Q Consensus       115 ---------------------~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~  166 (399)
                                           .++++    .+..+++++||||++|+.......   ...++...+....   +..+.+.
T Consensus        82 ~~~~l~~~l~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~---~~~~~~~~~a~~~~GiR~~~~~~  158 (442)
T PRK07203         82 PPPDFISILKNLWWRLDRALTLEDVYYSALICSLEAIKNGVTTVFDHHASPNYI---GGSLFTIADAAKKVGLRAMLCYE  158 (442)
T ss_pred             CCCCHHHHHHhheehhhhcCCHHHHHHHHHHHHHHHHHcCceEEEccccccccc---cchHHHHHHHHHHhCCeEEEecc
Confidence                                 01111    223567899999999985211111   1112222222221   1111111


Q ss_pred             eeeeeeCC-ChhhHHHHHHHHH--cCC--cEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhh
Q 015826          167 FWGGLVPE-NAYNASALEALLN--AGV--LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKG  236 (399)
Q Consensus       167 ~~~~~~~~-~~~~~~~l~~l~~--~G~--~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~  236 (399)
                      ....-... ..+.+++..++++  .+.  ..+...++++.   .+.++++.++++.+.|+++|+++++|+ |+..+
T Consensus       159 ~~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~---~~~~s~~~l~~~~~lA~~~g~~i~~H~~E~~~e  231 (442)
T PRK07203        159 TSDRDGEKELQEGVEENIRFIKHIDEAKDDMVEAMFGLHA---SFTLSDATLEKCREAVKETGRGYHIHVAEGIYD  231 (442)
T ss_pred             cccCCcchhHHHHHHHHHHHHHHhcCCCCCceEEEEccCC---CcCcCHHHHHHHHHHHHHcCCcEEEEecCChHH
Confidence            10000000 0111222223322  111  13444555542   236789999999999999999999997 44443

>PRK14085 imidazolonepropionase; Provisional

Probab=99.84  E-value=2.5e-19  Score=174.07  Aligned_cols=177  Identities=20%  Similarity=0.196  Sum_probs=109.1

Q ss_pred             ccEEEEc-cEEEcCCC---------ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           43 NQYWLTS-KRIVTPKG---------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        43 ~~~li~n-~~vv~~~~---------~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      ++++|+| +.|++.+.         ..+++|+|+||||++|++..+.+   .+.++||++|++|||||||+|+|+...+.
T Consensus         1 ~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~v~i~~g~I~~Vg~~~~~~---~~~~~iD~~g~~v~PGlId~H~Hl~~~~~   77 (382)
T PRK14085          1 MSTLITNIGELVTNDPELGEGPLGVLRDAAVVVEGGRVAWVGPAADAP---AADERVDAGGRAVLPGFVDSHSHLVFAGD   77 (382)
T ss_pred             CcEEEEcccEEEcCCCcccCCCcccccCcEEEEECCEEEEEcCCccCC---CCCeEEeCCCCEEecCeEecCcCccccCC
Confidence            4688999 59998652         23689999999999999864322   25689999999999999999999965322


Q ss_pred             C----------------------------CcCchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc
Q 015826          113 T----------------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR  160 (399)
Q Consensus       113 ~----------------------------~~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~  160 (399)
                      .                            +.++++    ...+.++++||||+++++. .  .....+.++......  +
T Consensus        78 r~~~~~~~~~~~~~~~~~i~~~~~~~~~~t~e~~~~~a~~~~~~~l~~G~Ttv~~~~~-~--~~~~~~~~~~~~~~~--~  152 (382)
T PRK14085         78 RSAEFAARMAGEPYSAGGIRTTVAATRAASDEELRANVRRLVAEALRQGTTTVETKTG-Y--GLTVEDEARSARIAA--E  152 (382)
T ss_pred             hhHHHHhhhcCCCccCCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCceEEEcCCc-C--CCCHHHHHHHHHHHH--H
Confidence            1                            011212    2356789999999999862 1  111122222211111  1


Q ss_pred             CceeEEeeee--eeC---CCh-hhHHH----HHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015826          161 IYVDVGFWGG--LVP---ENA-YNASA----LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH  230 (399)
Q Consensus       161 ~~~~~~~~~~--~~~---~~~-~~~~~----l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H  230 (399)
                      ........++  ..+   .+. ...+.    +...++..+..+|++....      ..+.++++++++.|+++|+++.+|
T Consensus       153 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~idi~~~~~------~~~~~~l~~~~~~a~~~g~~v~~H  226 (382)
T PRK14085        153 FTDEVTFLGAHVVPPEYAGDADEYVDLVCGPMLDAVAPHARWIDVFCERG------AFDEDQSRRVLTAGRAAGLGLRVH  226 (382)
T ss_pred             hhhcceeeccccCCcccCCCHHHHHHHHHHHHHHHHHHhCCeEEEEecCC------CCCHHHHHHHHHHHHHcCCCeEEE
Confidence            1001110100  001   111 11121    2244455577777765431      468899999999999999999999


Q ss_pred             cCC
Q 015826          231 AEM  233 (399)
Q Consensus       231 ~~~  233 (399)
                      +..
T Consensus       227 ~~~  229 (382)
T PRK14085        227 GNQ  229 (382)
T ss_pred             eCc
Confidence            853

>TIGR01178 ade adenine deaminase

Probab=99.84  E-value=6e-19  Score=176.93  Aligned_cols=174  Identities=19%  Similarity=0.289  Sum_probs=128.4

Q ss_pred             cEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHH
Q 015826           44 QYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG  121 (399)
Q Consensus        44 ~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~  121 (399)
                      +++|+|++|+++.+  ...++|.|+||||++|++..       +.++||++|++|+|||||+|+|+..++.. .+   ..
T Consensus         1 dlli~n~~ivd~~~~~~~~~dI~I~~g~I~~ig~~~-------~~~viDa~G~~v~PG~ID~H~Hi~~~~~~-~~---~~   69 (552)
T TIGR01178         1 DIVIKNAKIIDVYNGEIIPGDIAIANGHIAGVGKYN-------GVKVIDALGEYAVPGFIDAHIHIESSMLT-PS---EF   69 (552)
T ss_pred             CEEEEeeEEEeCCCCcEEeeeEEEECCEEEEecCCC-------CCeEEECCCCEEEeCeEecccccCCCCCC-hh---HH
Confidence            47899999998654  35789999999999998641       35799999999999999999999877653 22   23


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeee-eC-----CChh--hHHHHHHHHHc-CCcE
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL-VP-----ENAY--NASALEALLNA-GVLG  192 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~--~~~~l~~l~~~-G~~~  192 (399)
                      .+.++.+||||++++| +..+.....+.++.+++.+. ...+++...... .+     ....  ..++++++++. |+.+
T Consensus        70 ~~~al~~GvTtvv~~P-~~~~~v~g~~~~~~~~~~a~-~~~~d~~~~~~s~vp~~~~e~~g~~~~~~~i~~~~~~~~V~g  147 (552)
T TIGR01178        70 AKLVLPHGVTTVVSDP-HEIANVNGEDGINFMLNNAK-KTPLNFYFMLPSCVPALQFETSGAVLTAEDIDELMELDEVLG  147 (552)
T ss_pred             HHHHHCCCEEEEEcCC-CCCCCCCCHHHHHHHHHHhh-cCCcEEEEECCCCCCCCcccCCCCccCHHHHHHHHcCCCccE
Confidence            5678999999999999 55566667888888777665 456676433221 11     1111  36788888864 9999


Q ss_pred             EEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          193 LKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       193 ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      +|.+|.+++.    ..+++++.+.++.++++|+++..|++..
T Consensus       148 lke~m~~~~v----~~~d~~~l~~i~~a~~~g~~I~gHap~l  185 (552)
T TIGR01178       148 LAEVMDYPGV----INADIEMLNKINSARKRNKVIDGHCPGL  185 (552)
T ss_pred             EEEEecchhh----cCCCHHHHHHHHHHHhCCCEEEecCCCC
Confidence            9999977532    2244455555589999999999999743

The family described by this model includes an experimentally characterized adenine deaminase of Bacillus subtilis. It also include a member from Methanobacterium thermoautotrophicum, in which adenine deaminase activity has been detected.

>PRK05985 cytosine deaminase; Provisional

Probab=99.83  E-value=1.2e-18  Score=169.98  Aligned_cols=259  Identities=17%  Similarity=0.127  Sum_probs=156.0

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC-------
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE-------  114 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~-------  114 (399)
                      |.+++|+|++|+++.   ..+|.|+||+|++|++.....   ++.++||++|++|+|||||+|+|+.......       
T Consensus         1 ~~~~~i~~~~i~~~~---~~~v~i~~g~i~~i~~~~~~~---~~~~~id~~g~~v~Pg~iD~h~h~~~~~~~~~~~~~~~   74 (391)
T PRK05985          1 MTDLLFRNVRPAGGA---AVDILIRDGRIAAIGPALAAP---PGAEVEDGGGALALPGLVDGHIHLDKTFWGDPWYPNEP   74 (391)
T ss_pred             CCCEEEECcEECCCC---eeEEEEECCEEEEecCCCCCC---CCCcEEECCCCEEecceEeeEEccCccccCCccccCCC
Confidence            357899999999875   569999999999999864322   2457999999999999999999996432110       


Q ss_pred             c------------------Cch----HHHHHHHHcCCeeeeecCcCCCCCCC--CcHHHHHHHHHHHhccCceeEEe---
Q 015826          115 W------------------EGF----PSGTKAAAAGGITTLIDMPLNSDPST--ISTETLKLKVDAAEKRIYVDVGF---  167 (399)
Q Consensus       115 ~------------------e~~----~~~~~~al~~GvTtv~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---  167 (399)
                      +                  +++    ....+.++++|+|+++++. ...|..  ...+.+.+..+..+.....++..   
T Consensus        75 ~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~l~~G~t~vr~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~  153 (391)
T PRK05985         75 GPSLRERIANERRRRAASGHPAAERALALARAAAAAGTTAMRSHV-DVDPDAGLRHLEAVLAARETLRGLIDIQIVAFPQ  153 (391)
T ss_pred             CCCHHHHHHHHHHhhccchhHHHHHHHHHHHHHHhcCcceEEeeE-ccCCCcccchHHHHHHHHHHhhCcccEEEEeccC
Confidence            0                  011    1235678899999999987 333321  22333333333333222222221   


Q ss_pred             eeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCc
Q 015826          168 WGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDT  247 (399)
Q Consensus       168 ~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~  247 (399)
                      .+.+  ......+.+++.++.|+..+. .+.+.   ....++++++.++++.|+++|+++++|+.......         
T Consensus       154 ~g~~--~~~~~~~ll~~~l~~g~~~~g-g~~p~---~~~~~~~~~l~~~~~~A~~~g~~i~~Hv~e~~d~~---------  218 (391)
T PRK05985        154 SGVL--SRPGTAELLDAALRAGADVVG-GLDPA---GIDGDPEGQLDIVFGLAERHGVGIDIHLHEPGELG---------  218 (391)
T ss_pred             cccc--CCcCHHHHHHHHHHcCCCEEe-CCCCC---CcCCCHHHHHHHHHHHHHHhCCCcEEeeCCCCCcc---------
Confidence            1111  111234567777888875332 22221   12346779999999999999999999985432100         


Q ss_pred             CCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh-----hHHHHHHHHHHHCCCCEEEEcccc
Q 015826          248 LDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLMEAKTNGDSITVETCPH  322 (399)
Q Consensus       248 ~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-----~~~l~~i~~ak~~G~~vt~e~~p~  322 (399)
                                        ...+.++++.+++.+     ...++.+.|....     .+.-+.++..++.|+.|+..  +.
T Consensus       219 ------------------~~~~~~~~e~~~~~g-----~~~~~~i~H~~~l~~~~~~~~~~~i~~lae~g~~v~~~--~~  273 (391)
T PRK05985        219 ------------------AFQLERIAARTRALG-----MQGRVAVSHAFCLGDLPEREVDRLAERLAEAGVAIMTN--AP  273 (391)
T ss_pred             ------------------HHHHHHHHHHHHHhC-----CCCCEehhhhhhhhcCCHHHHHHHHHHHHHcCCeEEEe--CC
Confidence                              112333444444331     1235889998532     01236677778888876532  11


Q ss_pred             ccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          323 YLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       323 ~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                       +        ..+              ...+.+.++.|..-.+|||..
T Consensus       274 -~--------~~~--------------~~~~~~l~~~Gv~v~lGtD~~  298 (391)
T PRK05985        274 -G--------SVP--------------VPPVAALRAAGVTVFGGNDGI  298 (391)
T ss_pred             -C--------CCC--------------CCCHHHHHHCCCeEEEecCCC
Confidence             0        001              113556677899999999973

>COG3964 Predicted amidohydrolase [General function prediction only]

Probab=99.83  E-value=3e-19  Score=158.11  Aligned_cols=251  Identities=19%  Similarity=0.231  Sum_probs=166.3

Q ss_pred             CCccEEEEccEEEcCCCc--eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCch
Q 015826           41 PYNQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF  118 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~  118 (399)
                      +|.+++++|++++++...  ...+|.|.||||+++++. +.+   ...++||++|++|.||+||.|+|....+....   
T Consensus         2 mqfdiLLt~~rlidpa~g~d~~tniai~ngkIaa~~d~-~ap---a~tq~Ida~Gc~VspG~iDlHvHvy~ggt~~~---   74 (386)
T COG3964           2 MQFDILLTGGRLIDPARGIDEITNIAIINGKIAAADDY-PAP---AETQIIDADGCIVSPGLIDLHVHVYYGGTEGG---   74 (386)
T ss_pred             CccceeeeCCeecccccccCccceeeeecCeEEeccCc-CCC---hhheEEccCccEeccCeeeeeeEEecCCCccC---
Confidence            457999999999987653  357899999999999943 332   25689999999999999999999976543221   


Q ss_pred             HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh---ccCceeEEeeeeeeCCC---h--hhHHHHHHHHHcC-
Q 015826          119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE---KRIYVDVGFWGGLVPEN---A--YNASALEALLNAG-  189 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~---~--~~~~~l~~l~~~G-  189 (399)
                      ....+.+...||||++|.+ +  ....+...+.+......   -..++++++.+-+...+   .  -...++.++.+.. 
T Consensus        75 v~pd~~ga~~GvTTvVDAG-S--aGaanf~gF~r~vie~Sr~RI~Aflnvs~~Gl~a~nE~~d~~nid~d~i~aa~reh~  151 (386)
T COG3964          75 VRPDMYGAPNGVTTVVDAG-S--AGAANFDGFYRTVIEASRVRIKAFLNVSPPGLTASNELYDPDNIDEDKIHAAFREHR  151 (386)
T ss_pred             cCHHHccccCCceEEEecC-C--cCccchhhHHHHhhcchhheeeeeeeccCcceeeehhhCChhhCCHHHHHHHHHhCc
Confidence            1234667899999999987 2  22234444444332221   13455655443221110   0  1234566665533 


Q ss_pred             --CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhc-hhHHhhccCcCCchhhhcCCCCCChHHHH
Q 015826          190 --VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGS-ERHVKLEDDTLDTRSYSTYLKTRPPSWEE  266 (399)
Q Consensus       190 --~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~E~  266 (399)
                        +.++|+-++......+   .-.-+...++.|+..++|+++|..++... .+.+.+.+ ..+...+...-+......+.
T Consensus       152 d~ivGlKvR~s~~~~g~~---GitPl~la~~ia~~~klPlmvHigePp~~~dEvlerL~-~GDIitHcfngkpn~~l~~d  227 (386)
T COG3964         152 DVIVGLKVRVSTEDIGEY---GITPLTLALRIANDLKLPLMVHIGEPPVLMDEVLERLR-RGDIITHCFNGKPNTILTDD  227 (386)
T ss_pred             CcEEEEEEEeeecccccc---CCchHHHHHHHHhhcCCceEEecCCCCccHHHHHHhcc-CCceeeeeccCCCCCccccc
Confidence              4577876654322211   22346677888999999999999776654 33333322 34555555555555556666


Q ss_pred             HHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCC
Q 015826          267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD  313 (399)
Q Consensus       267 ~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~  313 (399)
                      ..+....+.|++       .|+++.+.|.... .+.+..+++-++|+
T Consensus       228 g~vr~~vrra~e-------rGV~fD~ghG~as-fsf~vAr~aia~Gl  266 (386)
T COG3964         228 GVVRAEVRRARE-------RGVIFDAGHGRAS-FSFNVARRAIANGL  266 (386)
T ss_pred             hhHHHHHHHHHh-------cceEEEccCCcce-eeHHHHHHHHhcCC
Confidence            777777888875       4999999999877 88999999999987

>PRK09237 dihydroorotase; Provisional

Probab=99.83  E-value=7e-19  Score=170.99  Aligned_cols=248  Identities=18%  Similarity=0.221  Sum_probs=145.5

Q ss_pred             EEEEccEEEcCCCc--eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHH
Q 015826           45 YWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGT  122 (399)
Q Consensus        45 ~li~n~~vv~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~  122 (399)
                      ++|+|++|+|+...  ..++|+|+||||++|++..+.+   .+.++||++|++|+|||||+|+|+...+ ...++  +..
T Consensus         1 ~~i~~~~v~d~~~~~~~~~~v~i~~g~I~~v~~~~~~~---~~~~~iD~~g~~v~PG~iD~H~H~~~~~-~~~~~--~~~   74 (380)
T PRK09237          1 LLLRGGRVIDPANGIDGVIDIAIEDGKIAAVAGDIDGS---QAKKVIDLSGLYVSPGWIDLHVHVYPGS-TPYGD--EPD   74 (380)
T ss_pred             CEEEeEEEECCCCCcccceEEEEECCEEEEecCCCCCC---CCCeEEECCCCEEecCEEEeeecCCCCC-CccCC--CHH
Confidence            47999999987653  4689999999999998754321   2567999999999999999999998543 22222  456


Q ss_pred             HHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHH-hc--cCceeEEeeeeeeCCC-----hhhHHHHHHHHH---cCCc
Q 015826          123 KAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA-EK--RIYVDVGFWGGLVPEN-----AYNASALEALLN---AGVL  191 (399)
Q Consensus       123 ~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~-----~~~~~~l~~l~~---~G~~  191 (399)
                      +.++.+||||+++++ +..  ..+.+.+....... ..  ..++++.+++...+..     ....++++++++   .|+.
T Consensus        75 ~~~~~~G~Ttv~~~~-~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~  151 (380)
T PRK09237         75 EVGVRSGVTTVVDAG-SAG--ADNFDDFRKLTIEASKTRVLAFLNISRIGLLAQDELADLEDIDADAVAEAVKRNPDFIV  151 (380)
T ss_pred             HHHHhCCcCEEEECC-CCC--CCCHHHHHHHHHhhhCcEEEEEEeeecccccccchhcCHhHCCHHHHHHHHHhCcCcEE
Confidence            789999999999988 332  24556665554443 21  2344555444332211     113466777765   5789


Q ss_pred             EEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHH-HHHHHH
Q 015826          192 GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW-EEAAIR  270 (399)
Q Consensus       192 ~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-E~~~v~  270 (399)
                      ++|.++.+...... ..+  .++.....+++.|+++.+|+++.......+.......+...|........... +...+.
T Consensus       152 glk~~~~~~v~~~~-~~~--~~~~~~~~a~~~g~~v~~H~~~~~~~~~~l~~~l~~g~~~~H~~~~~~~~~~~~~~~~~~  228 (380)
T PRK09237        152 GIKARMSSSVVGDN-GIE--PLELAKAIAAEANLPLMVHIGNPPPSLEEILELLRPGDILTHCFNGKPNRILDEDGELRP  228 (380)
T ss_pred             EEEEEEeccccccc-CCc--hHHHHHHHHHhcCCCEEEEcCCCCCCHHHHHhhccCCCEEEecCCCCCCCccCCCCcchH
Confidence            99998865421111 113  34444555668999999999775432222222110111111111111100111 112222


Q ss_pred             HHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCC
Q 015826          271 ELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD  313 (399)
Q Consensus       271 ~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~  313 (399)
                      .+.+..+        .|..+.+.|-+.. ..++.++.+.++|+
T Consensus       229 ~a~~~l~--------~G~~~~ig~g~~~-~~~~~~~~l~~~g~  262 (380)
T PRK09237        229 SVLEALE--------RGVRLDVGHGTAS-FSFKVAEAAIAAGI  262 (380)
T ss_pred             HHHHHHH--------CCEEEEecCCCCc-ccHHHHHHHHHCCC
Confidence            3333333        2778888876643 45555566666775

>PRK08203 hydroxydechloroatrazine ethylaminohydrolase; Reviewed

Probab=99.83  E-value=8.4e-19  Score=174.20  Aligned_cols=181  Identities=20%  Similarity=0.247  Sum_probs=109.9

Q ss_pred             EEEEccEEEcCCCc----eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC------
Q 015826           45 YWLTSKRIVTPKGV----ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE------  114 (399)
Q Consensus        45 ~li~n~~vv~~~~~----~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~------  114 (399)
                      +++.|+.|+++++.    .+++|+|+||+|++|++..+.+.  ++.++||++|++|||||||+|+|+.+.....      
T Consensus         4 ~i~~~~~v~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~~~~~--~~~~vID~~g~~v~PGlVn~H~H~~~~~~~g~~~~~~   81 (451)
T PRK08203          4 WIKNPLAIVTMDAARREIADGGLVVEGGRIVEVGPGGALPQ--PADEVFDARGHVVTPGLVNTHHHFYQTLTRALPAAQD   81 (451)
T ss_pred             EEEeccEEEEeCCCceEeeccEEEEECCEEEEEeCCccCCC--CCCeEEeCCCCEEecceEeccccccchhcccccccCC
Confidence            44555789987762    47899999999999998654321  2568999999999999999999997641110      


Q ss_pred             ------------------cCch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc---cCceeEEe--
Q 015826          115 ------------------WEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK---RIYVDVGF--  167 (399)
Q Consensus       115 ------------------~e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--  167 (399)
                                        .+++    .....+++++||||++|+. ...+.. ....++...+....   +..+....  
T Consensus        82 ~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~Ttv~d~~-~~~~~~-~~~~~~~~~~a~~~~G~R~~~~~~~~~  159 (451)
T PRK08203         82 AELFPWLTTLYPVWARLTPEMVRVATQTALAELLLSGCTTSSDHH-YLFPNG-LRDALDDQIEAAREIGMRFHATRGSMS  159 (451)
T ss_pred             CcHHHHHHHHhHHHHhCCHHHHHHHHHHHHHHHHhcCcCEEEcce-eecccc-ccchHHHHHHHHHHcCCeEEEecceee
Confidence                              0111    2234567899999999986 222221 11223333333321   11111110  


Q ss_pred             ----eeeeeC-----CChhhHHHHHHHHHcCC-----cEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015826          168 ----WGGLVP-----ENAYNASALEALLNAGV-----LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE  232 (399)
Q Consensus       168 ----~~~~~~-----~~~~~~~~l~~l~~~G~-----~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~  232 (399)
                          .++..+     ...+.++..+++++.+.     ..++..+++..   ...+++++++++++.|+++|+++++|+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~i~~~~~~~~---~~~~~~e~l~~~~~~A~~~g~~v~~H~~  235 (451)
T PRK08203        160 LGESDGGLPPDSVVEDEDAILADSQRLIDRYHDPGPGAMLRIALAPCS---PFSVSRELMRESAALARRLGVRLHTHLA  235 (451)
T ss_pred             cCCccCCCCccccccCHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCC---CCcCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence                000111     11123445555554321     34565555432   2357899999999999999999999973

>COG3653 N-acyl-D-aspartate/D-glutamate deacylase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.83  E-value=3.7e-19  Score=164.25  Aligned_cols=241  Identities=22%  Similarity=0.244  Sum_probs=150.8

Q ss_pred             CccEEEEccEEEcCCCc--eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchH
Q 015826           42 YNQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP  119 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~  119 (399)
                      .+|++|+++.|+|+.+.  +..+|.|+||+|++|++......  ...++||+.|++|.|||||+|+|.+...+.+.    
T Consensus         5 ~YD~ViR~g~ifDGtGnp~f~tdvgIrDGvIaav~kg~~dg~--~~~eevDaagriVaPGFIDvHtHyD~~~~~d~----   78 (579)
T COG3653           5 TYDVVIRDGLIFDGTGNPPFTTDVGIRDGVIAAVAKGALDGT--GCPEEVDAAGRIVAPGFIDVHTHYDAEVLLDP----   78 (579)
T ss_pred             eeeEEEeeceEEeCCCCCccccccccccceEEEEeccccccc--CCCeeecccCcEecccEEEeeecccceeeecC----
Confidence            57999999999999884  57899999999999998754321  24479999999999999999999875432211    


Q ss_pred             HHHHHHHcCCeeeeecCcCCCCCCCC----------------------------cHHHHHHHHHHHhccCc-eeEEeeee
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDPSTI----------------------------STETLKLKVDAAEKRIY-VDVGFWGG  170 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~~~~----------------------------~~~~~~~~~~~~~~~~~-~~~~~~~~  170 (399)
                       ..+..+.+|||||+...|+..-...                            .++.+.++++....... +|++...+
T Consensus        79 -~l~psv~hGVTTVv~GNCgis~ap~n~ed~d~l~s~ve~v~~e~~~~~~~~~~~w~tf~eyleale~~plgvnv~allg  157 (579)
T COG3653          79 -GLRPSVRHGVTTVVLGNCGISTAPANSEDADDLFSRVEAVGREFVFGALRDNQTWSTFAEYLEALEALPLGVNVSALLG  157 (579)
T ss_pred             -CccchhhcCeeEEEecCcccccccCChhhhhhhhhhhhhcCccccccccccccccCCHHHHHHHHHhCccCCChhhhcc
Confidence             2455678999999876543221111                            23344444544443322 33332111


Q ss_pred             ----------e---eCC--Chh----hHHHHHHHHHcCCcEEEE--------eecCCCCCCCCCCCHHHHHHHHHHHHhc
Q 015826          171 ----------L---VPE--NAY----NASALEALLNAGVLGLKS--------FMCPSGINDFPMTNASHIKEGLSVLARY  223 (399)
Q Consensus       171 ----------~---~~~--~~~----~~~~l~~l~~~G~~~ik~--------~~~~~~~~~~~~~~~~~l~~~~~~a~~~  223 (399)
                                .   ..+  ++.    +.+.+++.+++|+.+++.        ...++. ...+.-+.++...++..| ++
T Consensus       158 H~aLR~avmg~~~a~~~p~TeaelaaMaallreAlEaGalGmS~~~~~~~~tgd~~p~-~~l~~~t~el~~la~~va-~a  235 (579)
T COG3653         158 HSALRTAVLGLDRATDDPPTEAELAAMAALLREALEAGALGMSMDAAIDKLTGDRYPS-RALPFATWELRRLAISVA-RA  235 (579)
T ss_pred             hHHHHHHhhcccccccCCCchHHHHHHHHHHHHHHhccccccchhhhcccccccccCC-cccCcchHHHHHHHHHHH-Hh
Confidence                      0   001  111    334556667789988872        111111 112223444444444444 45


Q ss_pred             CC--CEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh---
Q 015826          224 KR--PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA---  298 (399)
Q Consensus       224 g~--~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~---  298 (399)
                      |.  ...+|-.++..                           ++.+++.++.++..+      ..++++.++|...+   
T Consensus       236 g~~iLqst~d~~ega---------------------------a~L~~l~~a~ri~~R------~~~vr~v~s~~a~ag~~  282 (579)
T COG3653         236 GGRILQSTHDRDEGA---------------------------AALEALLEASRIGNR------RKGVRMVMSHSADAGSM  282 (579)
T ss_pred             cCceeEeeccccchH---------------------------HHHHHHHHHHHhcCc------ccCceEEEecccccccc
Confidence            55  44566554321                           345577777777722      34899999996531   


Q ss_pred             -----hHHHHHHHHHHHCCCCEEEEccccccc
Q 015826          299 -----SSSLDLLMEAKTNGDSITVETCPHYLA  325 (399)
Q Consensus       299 -----~~~l~~i~~ak~~G~~vt~e~~p~~L~  325 (399)
                           ...+.++.+++..|.+|.++.+| |++
T Consensus       283 n~~~a~~~lgl~~kaq~~G~pVg~~~~p-~~a  313 (579)
T COG3653         283 NWGVAVFGLGLIEKAQLLGSPVGFDHYP-YTA  313 (579)
T ss_pred             chhhhhhccchHHHHHHhCCcceeeecc-ccc
Confidence                 26788999999999999999999 555

>PRK07583 cytosine deaminase-like protein; Validated

Probab=99.83  E-value=1.4e-18  Score=171.62  Aligned_cols=268  Identities=20%  Similarity=0.236  Sum_probs=154.7

Q ss_pred             ccEEEEccEEEcC------------CCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC
Q 015826           43 NQYWLTSKRIVTP------------KGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP  110 (399)
Q Consensus        43 ~~~li~n~~vv~~------------~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~  110 (399)
                      ..++|+|+++-+.            ++...++|.|+||||++|++....+   .+.++||++|++|+|||||+|+|++..
T Consensus        11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~dg~i~~i~~~~~~~---~~~~~id~~g~~v~Pg~id~H~Hld~~   87 (438)
T PRK07583         11 GRYWLKNARVPAALLEGGVPPGDTLEGLVLVDIEIADGKIAAILPAGGAP---DELPAVDLKGRMVWPCFVDMHTHLDKG   87 (438)
T ss_pred             CcEEEeccccccccccCccCCCcCCCCcEEEEEEEECCEEEEEecCCCCC---CCCceecCCCCcccCCcccceeccccc
Confidence            4678899885321            1234679999999999999765322   256799999999999999999998654


Q ss_pred             CCC-------------------------CcCc----hHHHHHHHHcCCeeeeecCcCCCCCC--CCcHHHHHHHHHHHhc
Q 015826          111 GRT-------------------------EWEG----FPSGTKAAAAGGITTLIDMPLNSDPS--TISTETLKLKVDAAEK  159 (399)
Q Consensus       111 ~~~-------------------------~~e~----~~~~~~~al~~GvTtv~d~~~~~~~~--~~~~~~~~~~~~~~~~  159 (399)
                      ...                         +.++    +...++.++.+|+|+++.+. +..+.  ..+.+.+.+..+....
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~~~Gtt~vRt~v-d~~~~~~~~~~~~i~~~~~~~~~  166 (438)
T PRK07583         88 HIWPRSPNPDGTFPGALDAVTADREAHWSAEDLYRRMEFGLRCAYAHGTSAIRTHL-DSFAPQAAISWEVFAELREAWAG  166 (438)
T ss_pred             eecCCCCCCCCCHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHhChhhEEeee-ccCCCCcccHHHHHHHHHHHhhc
Confidence            100                         0122    34556788999999777665 22111  2223334343443332


Q ss_pred             cC----ceeEEeeeeeeCCChhhHHHHHHHHH-c-CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          160 RI----YVDVGFWGGLVPENAYNASALEALLN-A-GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       160 ~~----~~~~~~~~~~~~~~~~~~~~l~~l~~-~-G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ..    ..++.+++...    ...+++.+.++ . |+.+.+.++.        .-+++.+.++++.|+++|+++.+|+..
T Consensus       167 ~~~~~~v~~~p~~~~~~----~~~~eL~~~v~~~~gv~g~~~~~~--------~~~d~~l~~i~~lA~~~G~~v~vH~~E  234 (438)
T PRK07583        167 RIALQAVSLVPLDAYLT----DAGERLADLVAEAGGLLGGVTYMN--------PDLDAQLDRLFRLARERGLDLDLHVDE  234 (438)
T ss_pred             cCeEEEEEecChhhccC----chHHHHHHHHHHcCCEEeCCCCCC--------CCHHHHHHHHHHHHHHhCCCcEEeECC
Confidence            21    11122222111    11245555553 3 4445443321        125689999999999999999999943


Q ss_pred             -hhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh-----hHHHHHHHH
Q 015826          234 -EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLME  307 (399)
Q Consensus       234 -~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-----~~~l~~i~~  307 (399)
                       .+...                            ..+..+.+.+.+.+     ...++++.|....     .+.-+.++.
T Consensus       235 ~~~~~~----------------------------~~l~~~~~~~~~~G-----~~~~v~i~H~~~l~~~~~~~~~~~i~~  281 (438)
T PRK07583        235 TGDPAS----------------------------RTLKAVAEAALRNG-----FEGKVTCGHCCSLAVQPEEQAQATIAL  281 (438)
T ss_pred             CCCchH----------------------------HHHHHHHHHHHHhC-----CCCCEEEEeccchhcCCHHHHHHHHHH
Confidence             22110                            11233333333321     1346889998642     122467778


Q ss_pred             HHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          308 AKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       308 ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                      .++.|+.++  +||...+.....      .....|+.|...   .+.+.++.|+..++|||+.
T Consensus       282 la~~gv~vv--~~P~~~~~l~~~------~~~~~p~~~~~~---~v~~l~~aGV~valGtD~~  333 (438)
T PRK07583        282 VAEAGIAIV--SLPMCNLYLQDR------QPGRTPRWRGVT---LVHELKAAGIPVAVASDNC  333 (438)
T ss_pred             HHHcCCeEE--ECcchhhhhcCC------CcCCCCCCCCcc---hHHHHHHCCCeEEEEeCCC
Confidence            888877664  566432111100      001134444433   3444556699999999995

>PRK06380 metal-dependent hydrolase; Provisional

Probab=99.82  E-value=1.6e-18  Score=170.69  Aligned_cols=176  Identities=17%  Similarity=0.284  Sum_probs=107.3

Q ss_pred             ccEEEEccEEEcCCC---ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC-----
Q 015826           43 NQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE-----  114 (399)
Q Consensus        43 ~~~li~n~~vv~~~~---~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~-----  114 (399)
                      |+++|+|++|+++++   ..+++|+|+||+|++||+...     .+.++||++|++|+|||||+|+|+.+.....     
T Consensus         1 m~~li~~~~v~~~~~~~~~~~~~v~i~~g~I~~ig~~~~-----~~~~viD~~g~~v~PG~Vd~H~Hl~~~~~rg~~~~~   75 (418)
T PRK06380          1 MSILIKNAWIVTQNEKREILQGNVYIEGNKIVYVGDVNE-----EADYIIDATGKVVMPGLINTHAHVGMTASKGLFDDV   75 (418)
T ss_pred             CeEEEEeeEEEECCCCceeeeeeEEEECCEEEEecCCCC-----CCCEEEECCCCEEccCEEeeccCCCccccCCcccCC
Confidence            357899999998753   347899999999999997532     2457999999999999999999997653211     


Q ss_pred             -----------------cCchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeee-ee
Q 015826          115 -----------------WEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG-LV  172 (399)
Q Consensus       115 -----------------~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  172 (399)
                                       .++++    .+..+++++||||++|+...       .+.+.+..+....+..+.+..... ..
T Consensus        76 ~l~~~~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~G~Tt~~d~~~~-------~~~~~~a~~~~G~r~~~~~~~~~~~~~  148 (418)
T PRK06380         76 DLEEFLMKTFKYDSKRTREGIYNSAKLGMYEMINSGITAFVDLYYS-------EDIIAKAAEELGIRAFLSWAVLDEEIT  148 (418)
T ss_pred             CHHHHHHHHHhhhhcCCHHHHHHHHHHHHHHHHhcCCeEEEccccC-------hHHHHHHHHHhCCeEEEecccccCCcc
Confidence                             01111    23456789999999988621       122222222211122121111100 00


Q ss_pred             CCChhhHHHHHHHHH--cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          173 PENAYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       173 ~~~~~~~~~l~~l~~--~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .......+...++++  .+-..+...+.+.+   ...+++++++++++.|+++|+++++|+..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~s~e~l~~~~~~A~~~g~~v~~H~~e  208 (418)
T PRK06380        149 TQKGDPLNNAENFIREHRNEELVTPSIGVQG---IYVANDETYLKAKEIAEKYDTIMHMHLSE  208 (418)
T ss_pred             cccchHHHHHHHHHHHhcCCCCeEEEEECCC---CccCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence            000111222233322  11122444444432   34679999999999999999999999854

>TIGR03314 Se_ssnA putative selenium metabolism protein SsnA

Probab=99.82  E-value=1.2e-18  Score=172.23  Aligned_cols=274  Identities=18%  Similarity=0.159  Sum_probs=147.6

Q ss_pred             EEEEccEEEcCCC---c-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC-------
Q 015826           45 YWLTSKRIVTPKG---V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-------  113 (399)
Q Consensus        45 ~li~n~~vv~~~~---~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-------  113 (399)
                      ++|+|++|++.++   . .+++|+|+||+|++|++..+.....++.++||++|++|+|||||+|+|+.+....       
T Consensus         1 ~li~~~~i~t~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~~~~~~~~id~~g~~v~PG~vd~H~H~~~~~~rg~~~d~~   80 (441)
T TIGR03314         1 LLIGNGTAVQLDPTRPIQEGGDIAIDGDVIKAVGPTEELKQKYPEATFIDAKGKLIMPGFINTHNHFYSTFARGMMADIP   80 (441)
T ss_pred             CEEECCEEEecCCCCceEeccEEEEECCEEEEEcCchhhcccCCCCeEEeCCCCEEecCeeecccchhhhhhccccccCC
Confidence            3789999996543   2 4689999999999999753222111345789999999999999999999653110       


Q ss_pred             ---Cc-----------------CchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeee
Q 015826          114 ---EW-----------------EGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG  169 (399)
Q Consensus       114 ---~~-----------------e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (399)
                         +.                 ++++    .+..+++++||||++|+...........+.+.+......-+..+.+....
T Consensus        81 ~~~~~~~~l~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GtTt~~d~~~~~~~~~~~~~~~~~a~~~~GiR~~~~~~~~~  160 (441)
T TIGR03314        81 PPPDFISILKNLWWRLDRALTLEDVYYSGLICSLDAIKSGCTTVIDHHASPNAITGSLSTIRKAADEAGLRTMLCYETSD  160 (441)
T ss_pred             CCCCHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHHHcCCeEEEecccccccccchHHHHHHHHHHhCCeEEEeeeeec
Confidence               00                 1111    12345789999999998621110111112222222211112222222211


Q ss_pred             eee-CCChhhHHHHHHHHH--cCC--cEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhchhHHhh
Q 015826          170 GLV-PENAYNASALEALLN--AGV--LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSERHVKL  243 (399)
Q Consensus       170 ~~~-~~~~~~~~~l~~l~~--~G~--~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~~~  243 (399)
                      ... ....+.+++..++++  .+.  ..++..+.++.   ...++++.++++.+.|+++|+++++|+ |+..+......+
T Consensus       161 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~~p~~---~~t~s~~~l~~~~~lA~~~~~~i~~H~~E~~~e~~~~~~~  237 (441)
T TIGR03314       161 RDGGKEMQEGVEENIAFIKKSSGKEPYLVEAHIGAHA---PFTVSDAGLEMCREAVQATGRGFHIHVAEDIYDVEDSHHK  237 (441)
T ss_pred             CCCcccHHHHHHHHHHHHHHhccCCCCceEEEEecCC---CCCCCHHHHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHH
Confidence            000 011111222223322  121  13555555542   246899999999999999999999997 554443322222


Q ss_pred             ccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccc
Q 015826          244 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHY  323 (399)
Q Consensus       244 ~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~  323 (399)
                      .+             .+       .++.+    .+.+..++ .-.-.|++|++.  ++++++++.   |  +.+..||..
T Consensus       238 ~g-------------~~-------~~~~l----~~~G~l~~-~~~~~H~~~~~~--~d~~~la~~---g--~~v~~cP~s  285 (441)
T TIGR03314       238 YG-------------KD-------IVERL----ADFGLLGS-KTLAAHCIYLSD--REIELLNET---D--TFVVHNPES  285 (441)
T ss_pred             cC-------------CC-------HHHHH----HHCCCCCC-CeEEEEEecCCH--HHHHHHHHc---C--CcEEECHHH
Confidence            11             01       12222    22222221 112346666655  566666654   4  555668831


Q ss_pred             cccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCC
Q 015826          324 LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT  372 (399)
Q Consensus       324 L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~  372 (399)
                           +..-..|     .||         +.+.++.|..-.+|||..+.
T Consensus       286 -----n~~l~~G-----~~p---------~~~~~~~Gv~v~LGtD~~~~  315 (441)
T TIGR03314       286 -----NMGNAVG-----YNP---------VLRMFKNGILLGLGTDGYTS  315 (441)
T ss_pred             -----HhhhccC-----CCC---------HHHHHHCCCEEEEcCCCCCc
Confidence                 1100111     233         34567779999999997543

Members of this protein family are found exclusively in genomes that contain putative set of labile selenium-dependent enzyme accessory proteins as well as homologs of a labile selenium-dependent purine hydroxylase. A mutant in this gene in Escherichia coli had improved stationary phase viability. The function is unknown.

>cd01307 Met_dep_hydrolase_B Metallo-dependent hydrolases, subgroup B is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=99.82  E-value=8.5e-19  Score=167.65  Aligned_cols=163  Identities=20%  Similarity=0.310  Sum_probs=113.5

Q ss_pred             EEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCC
Q 015826           62 AVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSD  141 (399)
Q Consensus        62 ~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~  141 (399)
                      +|+|+||||++|++....+   .+.++||++|++|+|||||+|+|+..++....+   ..++.++.+||||++|++ +..
T Consensus         1 ~i~i~~g~I~~i~~~~~~~---~~~~~id~~g~~v~PG~iD~H~H~~~~g~~~~~---~~~~~a~~~GvTtvvd~~-~~~   73 (338)
T cd01307           1 DVAIENGKIAAVGAALAAP---AATQIVDAGGCYVSPGWIDLHVHVYQGGTRYGD---RPDMIGVKSGVTTVVDAG-SAG   73 (338)
T ss_pred             CEEEECCEEEEccCCCCCC---CCCeEEECCCCEEecCeEEeeecCCCCCcccCC---CHhHHHHcCceeEEEeCC-CCC
Confidence            5899999999999854321   246899999999999999999999988765443   377889999999999998 433


Q ss_pred             CCCCcHHHHHHHH-HHHhc--cCceeEEeeeeeeCCC-h----hhHHHHHHHH---HcCCcEEEEeecCCCCCCCCCCCH
Q 015826          142 PSTISTETLKLKV-DAAEK--RIYVDVGFWGGLVPEN-A----YNASALEALL---NAGVLGLKSFMCPSGINDFPMTNA  210 (399)
Q Consensus       142 ~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~-~----~~~~~l~~l~---~~G~~~ik~~~~~~~~~~~~~~~~  210 (399)
                      +  ...+.+...+ +....  ..++|+++++.+.... +    ...+.+.+++   +.|+.++|.++...+...   ...
T Consensus        74 ~--~~~~~~~~~~~~~~~~~v~a~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~e~~~gi~gik~~~~~~~~~~---~~~  148 (338)
T cd01307          74 A--DNIDGFRYTVIERSATRVYAFLNISRVGLVAQDELPDPDNIDEDAVVAAAREYPDVIVGLKARASKSVVGE---WGI  148 (338)
T ss_pred             C--CCHHHHHHHHHHhhhceEEEEEeeeccccccccccCChhHCCHHHHHHHHHHCcCcEEEEEEEeecccccc---cCC
Confidence            3  4455544434 34433  3567777776543321 1    1233444443   468899999887543211   123


Q ss_pred             HHHHHHHHHHHhcCCCEEEecCChhh
Q 015826          211 SHIKEGLSVLARYKRPLLVHAEMEKG  236 (399)
Q Consensus       211 ~~l~~~~~~a~~~g~~v~~H~~~~~~  236 (399)
                      ..++..++.++++|+++.+|+++...
T Consensus       149 ~~l~~~~~~a~~~~~pi~vH~~~~~~  174 (338)
T cd01307         149 KPLELAKKIAKEADLPLMVHIGSPPP  174 (338)
T ss_pred             cHHHHHHHHHHHcCCCEEEEeCCCCC
Confidence            34889999999999999999876543

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.

>PRK06151 N-ethylammeline chlorohydrolase; Provisional

Probab=99.82  E-value=4.8e-19  Score=177.25  Aligned_cols=182  Identities=16%  Similarity=0.160  Sum_probs=108.0

Q ss_pred             cEEEEccEEEcCCC-----ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC----C---
Q 015826           44 QYWLTSKRIVTPKG-----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP----G---  111 (399)
Q Consensus        44 ~~li~n~~vv~~~~-----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~----~---  111 (399)
                      .++|+|+.|++.++     ..+++|+|+||+|++|++....    ++.++||++|++|||||||+|+|+.+.    +   
T Consensus         2 ~~li~~~~v~~~d~~~~~~~~~~~VlVe~g~I~~Vg~~~~~----~~~~viD~~g~~vlPGlVdaH~Hl~~~~~~~~~~~   77 (488)
T PRK06151          2 RTLIKARWVLGFDDGDHRLLRDGEVVFEGDRILFVGHRFDG----EVDRVIDAGNALVGPGFIDLDALSDLDTTILGLDN   77 (488)
T ss_pred             eEEEEccEEEEEcCCCCeEEeCcEEEEECCEEEEecCCCCC----CCCeEEeCCCCEEecCEEeeecccchhhhhccccc
Confidence            68999999976443     2478999999999999975321    245799999999999999999997421    0   


Q ss_pred             C-----C----------------CcCch----HHHHHHHHcCCeeeeecCcCCCCCC-CCcHHHHHHHHHHHhccC-cee
Q 015826          112 R-----T----------------EWEGF----PSGTKAAAAGGITTLIDMPLNSDPS-TISTETLKLKVDAAEKRI-YVD  164 (399)
Q Consensus       112 ~-----~----------------~~e~~----~~~~~~al~~GvTtv~d~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~  164 (399)
                      .     .                +.+++    ..+..+++++||||++|+....... ......+....+.....+ ...
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~t~e~~~~~a~~~~~e~L~~GvTt~~d~~~~~~~~~~~~~~~~~~~~~a~~~~GiR~~  157 (488)
T PRK06151         78 GPGWAKGRVWSRDYVEAGRREMYTPEELAFQKRYAFAQLLRNGITTAMPIASLFYRQWAETYAEFAAAAEAAGRLGLRVY  157 (488)
T ss_pred             chhHHhcccCchhhhhcchhhcCCHHHHHHHHHHHHHHHHhcCeeEEehhhhhhccccccccchHHHHHHHHHHcCCeEE
Confidence            0     0                00111    2345678999999999874111111 111112222222221111 111


Q ss_pred             EEe--ee---------eeeC-----CChhhHHHH----HHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 015826          165 VGF--WG---------GLVP-----ENAYNASAL----EALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK  224 (399)
Q Consensus       165 ~~~--~~---------~~~~-----~~~~~~~~l----~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g  224 (399)
                      ++.  ..         ...+     ...+..++.    ++....|...+|..+.+..   ...+++++|+++++.|+++|
T Consensus       158 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~i~~~~~p~~---~~~~s~e~l~~~~~~A~~~g  234 (488)
T PRK06151        158 LGPAYRSGGSVLEADGSLEVVFDEARGLAGLEEAIAFIKRVDGAHNGLVRGMLAPDR---IETCTVDLLRRTAAAARELG  234 (488)
T ss_pred             ecchhccCccccccCCCCCccccchhHHHHHHHHHHHHHHhhcccCCceEEEEcCCC---CCCCCHHHHHHHHHHHHHCC
Confidence            110  00         0000     001112222    3333356666777665532   23579999999999999999


Q ss_pred             CCEEEecC
Q 015826          225 RPLLVHAE  232 (399)
Q Consensus       225 ~~v~~H~~  232 (399)
                      +++++|+.
T Consensus       235 ~~v~~H~~  242 (488)
T PRK06151        235 CPVRLHCA  242 (488)
T ss_pred             CcEEEEEC
Confidence            99999984

>PRK12393 amidohydrolase; Provisional

Probab=99.81  E-value=4.4e-18  Score=168.96  Aligned_cols=184  Identities=21%  Similarity=0.227  Sum_probs=107.1

Q ss_pred             CccEEEEccE-EEcCCC----cee-eEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC---C
Q 015826           42 YNQYWLTSKR-IVTPKG----VIS-GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG---R  112 (399)
Q Consensus        42 ~~~~li~n~~-vv~~~~----~~~-~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~---~  112 (399)
                      |.+++|+|+. |++.+.    ..+ ++|+|+||+|++|++.. .   .++.++||++|++|+|||||+|+|+.+..   .
T Consensus         1 ~~~~li~~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~Vg~~~-~---~~~~~viD~~g~~v~PG~VnaH~Hl~~~~~rg~   76 (457)
T PRK12393          1 MPSLLIRNAAAIMTGLPGDAARLGGPDIRIRDGRIAAIGALT-P---LPGERVIDATDCVVYPGWVNTHHHLFQSLLKGV   76 (457)
T ss_pred             CCcEEEECCeEEEecCCCccccccCceEEEECCEEEEEeccC-C---CCCCeEEeCCCCEEecCEeecccCccccccccc
Confidence            4578999996 676443    234 48999999999999832 1   13578999999999999999999997642   1


Q ss_pred             C---C-----c--------------Cch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc---cCce
Q 015826          113 T---E-----W--------------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK---RIYV  163 (399)
Q Consensus       113 ~---~-----~--------------e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  163 (399)
                      .   .     |              +++    +.+..+++++||||++|+.+...+ ....+......+....   +..+
T Consensus        77 ~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~d~~~~~~~-~~~~~~~~~~~~a~~~~G~R~~~  155 (457)
T PRK12393         77 PAGINQSLTAWLAAVPYRFRARFDEDLFRLAARIGLVELLRSGCTTVADHHYLYHP-GMPFDTGDILFDEAEALGMRFVL  155 (457)
T ss_pred             ccccCCchHHHhhhCcchhhhhCCHHHHHHHHHHHHHHHHhCCccEeecchhhccc-ccccchHHHHHHHHHHcCCeEEE
Confidence            0   0     0              011    234557789999999998521111 1112222333333321   1111


Q ss_pred             eEEeee-------ee----eCCC-hhhHHHHHHHHHc---CC-c-EEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 015826          164 DVGFWG-------GL----VPEN-AYNASALEALLNA---GV-L-GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP  226 (399)
Q Consensus       164 ~~~~~~-------~~----~~~~-~~~~~~l~~l~~~---G~-~-~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~  226 (399)
                      .+....       ..    .... .+.++..+++.+.   +. . .+.+.+.+..  ....++++.++++++.|+++|++
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~e~l~~~~~~a~~~g~~  233 (457)
T PRK12393        156 CRGGATQTRGDHPGLPTALRPETLDQMLADVERLVSRYHDASPDSLRRVVVAPTT--PTFSLPPELLREVARAARGMGLR  233 (457)
T ss_pred             EccccccccccCCCCCCcccccCHHHHHHHHHHHHHHhcCCCcCCceEEEEcCCC--CCCCcCHHHHHHHHHHHHHcCCe
Confidence            111100       00    0000 1123334444321   11 1 1333344332  11367899999999999999999


Q ss_pred             EEEecC
Q 015826          227 LLVHAE  232 (399)
Q Consensus       227 v~~H~~  232 (399)
                      +++|+.
T Consensus       234 ~~~H~~  239 (457)
T PRK12393        234 LHSHLS  239 (457)
T ss_pred             EEEEeC
Confidence            999984

>PRK08204 hypothetical protein; Provisional

Probab=99.81  E-value=7.1e-18  Score=167.67  Aligned_cols=263  Identities=19%  Similarity=0.203  Sum_probs=145.0

Q ss_pred             CccEEEEccEEEcCCC----ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC---
Q 015826           42 YNQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---  114 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~---  114 (399)
                      |.+++|+|++|++.++    ..+++|+|+||+|++|++..+.    ++.++||++|++|+|||||+|+|+.+.....   
T Consensus         1 ~~~~li~~~~v~~~~~~~~~~~~~~v~V~~g~I~~Vg~~~~~----~~~~viD~~g~~v~PGlId~H~H~~~~~~~~~~~   76 (449)
T PRK08204          1 MKRTLIRGGTVLTMDPAIGDLPRGDILIEGDRIAAVAPSIEA----PDAEVVDARGMIVMPGLVDTHRHTWQSVLRGIGA   76 (449)
T ss_pred             CCcEEEECcEEEecCCCCCccccceEEEECCEEEEecCCCCC----CCCeEEeCCCCEEecCEEeeeeccchhhhccccC
Confidence            4578899999997554    2478999999999999986432    2457999999999999999999985431100   


Q ss_pred             ------c--------------Cc----hHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc---cCceeEEe
Q 015826          115 ------W--------------EG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK---RIYVDVGF  167 (399)
Q Consensus       115 ------~--------------e~----~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  167 (399)
                            +              ++    .......++++||||++++.. ...   .........+....   +..+....
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~L~~GvTtv~d~~~-~~~---~~~~~~~~~~~~~~~G~r~~~~~~~  152 (449)
T PRK08204         77 DWTLQTYFREIHGNLGPMFRPEDVYIANLLGALEALDAGVTTLLDWSH-INN---SPEHADAAIRGLAEAGIRAVFAHGS  152 (449)
T ss_pred             CCcHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHhcCCeEEeeccc-ccC---ChhHHHHHHHHHHHcCCeEEEEccc
Confidence                  0              01    112345789999999999762 111   11112222222221   11111110


Q ss_pred             ee--e--eeCCChhhHHHHHHH---HHcCCcE-EEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchh
Q 015826          168 WG--G--LVPENAYNASALEAL---LNAGVLG-LKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER  239 (399)
Q Consensus       168 ~~--~--~~~~~~~~~~~l~~l---~~~G~~~-ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~  239 (399)
                      ..  .  ......+..++++.+   ...+++. +...+...+   ..+++++.++++++.|+++|+++++|+......  
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~--  227 (449)
T PRK08204        153 PGPSPYWPFDSVPHPREDIRRVKKRYFSSDDGLLTLGLAIRG---PEFSSWEVARADFRLARELGLPISMHQGFGPWG--  227 (449)
T ss_pred             cCCCCCCCcchhhhhHHHHHHHHHhhccCCCCceEEEEecCC---cccCCHHHHHHHHHHHHHcCCcEEEEEcCCCcc--
Confidence            00  0  000011122233333   2233332 223233321   234688999999999999999999998432110  


Q ss_pred             HHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEc
Q 015826          240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET  319 (399)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~  319 (399)
                              .          .      ...+..+.+..        ..+.++.+.|.+..  +-+.++..++.|+.++  +
T Consensus       228 --------~----------~------~~~~~~l~~~g--------~~~~~~~i~H~~~~--~~~~~~~la~~g~~v~--~  271 (449)
T PRK08204        228 --------A----------T------PRGVEQLHDAG--------LLGPDLNLVHGNDL--SDDELKLLADSGGSFS--V  271 (449)
T ss_pred             --------c----------C------CCHHHHHHHCC--------CCCCCeEEEecCCC--CHHHHHHHHHcCCCEE--E
Confidence                    0          0      00122222211        12456677777653  1234555566676554  5


Q ss_pred             cccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCC
Q 015826          320 CPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT  372 (399)
Q Consensus       320 ~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~  372 (399)
                      ||.+-.     .  .+.   -.+|         +.+.++.|..-.+|||..+.
T Consensus       272 ~P~~~~-----~--~g~---~~~~---------~~~~~~~Gv~v~lGtD~~~~  305 (449)
T PRK08204        272 TPEIEM-----M--MGH---GYPV---------TGRLLAHGVRPSLGVDVVTS  305 (449)
T ss_pred             ChHHHh-----h--hcC---CCCc---------HHHHHhcCCceeeccccCCC
Confidence            674211     0  010   0233         34567789999999998654

>COG0418 PyrC Dihydroorotase [Nucleotide transport and metabolism]

Probab=99.81  E-value=8.3e-18  Score=149.26  Aligned_cols=247  Identities=20%  Similarity=0.272  Sum_probs=171.1

Q ss_pred             EEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc-C-ceeEEeeeeee
Q 015826           95 VIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-I-YVDVGFWGGLV  172 (399)
Q Consensus        95 ~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~  172 (399)
                      +-+..-.|.|+|+++..      +......-..-++...+-|| |..|+..+.+...++.++.... . .-++.+.+.+-
T Consensus         5 l~i~rPdDwHlHLRdg~------mL~~V~p~ts~~f~rAiIMP-NL~pPvtt~~~a~aYr~rIl~a~p~~~~F~PLMtlY   77 (344)
T COG0418           5 LTIRRPDDWHLHLRDGA------MLKAVVPYTSRGFGRAIIMP-NLVPPVTTVADALAYRERILKAVPAGHRFTPLMTLY   77 (344)
T ss_pred             eeccCccceeEEecCcc------HHHHhhhhhhhhcceEEEcC-CCCCCcccHHHHHHHHHHHHHhCcCCCCCceeEEEE
Confidence            34567789999998752      22222222234888899999 7777776655555544443211 1 11222322221


Q ss_pred             CCChhhHHHHHHHHHcC-CcEEEEeecCCCC-CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCc
Q 015826          173 PENAYNASALEALLNAG-VLGLKSFMCPSGI-NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDT  250 (399)
Q Consensus       173 ~~~~~~~~~l~~l~~~G-~~~ik~~~~~~~~-~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~  250 (399)
                      -.+....+++++..+.| +.++|.|...-.. ......+-+.+..+++.+++.|+++.+|-|-.+.          +.|.
T Consensus        78 Ltd~~~peel~~a~~~g~i~a~KlYPaGaTTNS~~GV~~~~~~~pvle~Mq~~gmpLlvHGEvt~~----------~vDi  147 (344)
T COG0418          78 LTDSTTPEELEEAKAKGVIRAVKLYPAGATTNSDSGVTDIEKIYPVLEAMQKIGMPLLVHGEVTDA----------EVDI  147 (344)
T ss_pred             ecCCCCHHHHHHHHhcCcEEEEEeccCCccccCcCCcCcHHHHHHHHHHHHHcCCeEEEecccCCc----------cccc
Confidence            12223467899998888 6688987543211 1123456788999999999999999999876543          1121


Q ss_pred             hhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEcccccccccccc
Q 015826          251 RSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE  330 (399)
Q Consensus       251 ~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~  330 (399)
                      .+           .|..-+..+++-.++.     ++..++.+.|++++ ++++.|+.+   +-++.+.++||||.++.++
T Consensus       148 fd-----------rE~~Fi~~vl~pl~~~-----fP~LKIV~EHiTT~-dav~~v~~~---~~nlaATIT~hHL~~nrnd  207 (344)
T COG0418         148 FD-----------REAAFIESVLEPLRQR-----FPKLKIVLEHITTK-DAVEYVKDA---NNNLAATITPHHLLLNRND  207 (344)
T ss_pred             hh-----------hHHHHHHHHHHHHHhh-----CCcceEEEEEeccH-HHHHHHHhc---CcceeeEeehhheeeehhh
Confidence            11           2333445444433332     57899999999998 888888776   4459999999999999988


Q ss_pred             CCCCC--cceEEcCCCCChhhHHHHHHHHhcCCcc-EEeCCCCCCCccccc
Q 015826          331 IPDGD--TRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKL  378 (399)
Q Consensus       331 ~~~~~--~~~~~~Pplr~~~~~~~l~~~l~~G~id-~i~sdh~p~~~~~k~  378 (399)
                      +.-+|  +.+.|.|-++..++|++|.++..+|..- ++|||.+||....|+
T Consensus       208 ~l~Ggi~Ph~fClPilKr~~hr~AL~~aa~sg~~kfFlGtDSAPH~~~~Ke  258 (344)
T COG0418         208 MLVGGIRPHLFCLPILKRETHREALREAATSGHPKFFLGTDSAPHARSRKE  258 (344)
T ss_pred             hhcCCCCcceeeeccccchhhHHHHHHHHhcCCCcEEecCCCCCCcccccc
Confidence            76555  8899999999999999999999999887 889999999988886

>PRK09356 imidazolonepropionase; Validated

Probab=99.80  E-value=4.4e-18  Score=167.00  Aligned_cols=184  Identities=23%  Similarity=0.301  Sum_probs=106.7

Q ss_pred             CccEEEEccEEEcCCC-------c-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC
Q 015826           42 YNQYWLTSKRIVTPKG-------V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT  113 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~-------~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~  113 (399)
                      |++++|+|++|+++++       . .+++|+|+||||++|++..+.+. ..+.++||++|++|||||||+|+|+...+..
T Consensus         2 ~~~~li~~~~v~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~~-~~~~~~iD~~g~~v~PG~id~H~Hl~~~~~~   80 (406)
T PRK09356          2 MADLLWTNAQLATMDGGGMGELGIIEDGAIAIEDGKIVWVGPEADLPA-AYAAEVIDAGGKLVTPGLIDCHTHLVFGGNR   80 (406)
T ss_pred             CceEEEECCEEEecCCCCccccccccCcEEEEECCEEEEEeCcccccc-ccCceEEECCCCEEeeceEecCCCcccCCCc
Confidence            5789999999998753       2 37899999999999998643321 1235899999999999999999999764221


Q ss_pred             C-----------c----------------------Cch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHH
Q 015826          114 E-----------W----------------------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDA  156 (399)
Q Consensus       114 ~-----------~----------------------e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~  156 (399)
                      .           +                      +++    ......++++||||+.++.....+.....+.++.. +.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~a~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~-~~  159 (406)
T PRK09356         81 ANEFELRLQGVSYEEIAAQGGGILSTVRATRAASEEELFAQALPRLDALLAEGVTTVEIKSGYGLDLETELKMLRVA-RR  159 (406)
T ss_pred             HHHHHHHHCCCcHHHHHHhcCChHHHHHHHHhCCHHHHHHHHHHHHHHHHhcCceEEEeeccCCCCHHHHHHHHHHH-HH
Confidence            0           0                      011    12234668999999998641101100111122221 12


Q ss_pred             HhccCceeEEe--ee--eeeC---CC-hhhHHHH-HHHH----H-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh
Q 015826          157 AEKRIYVDVGF--WG--GLVP---EN-AYNASAL-EALL----N-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR  222 (399)
Q Consensus       157 ~~~~~~~~~~~--~~--~~~~---~~-~~~~~~l-~~l~----~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~  222 (399)
                      ...+..+.+..  .+  ++..   .. ....+.+ ++++    . .++..++.+...      ..+++++++++++.|++
T Consensus       160 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~------~~~~~~~l~~~~~~A~~  233 (406)
T PRK09356        160 LGEEHPVDVVTTFLGAHAVPPEYKGRPDAYIDLVCEEMLPAVAEEGLADAVDVFCET------GAFSVEQSERVLEAAKA  233 (406)
T ss_pred             HhhhCCCceEeeeeecccCCccccCCHHHHHHHHHHHHhHHHHhcCCcceEEEEecC------CCCCHHHHHHHHHHHHH
Confidence            11111111111  10  0010   01 1111111 1122    1 245566543222      24688999999999999


Q ss_pred             cCCCEEEecCC
Q 015826          223 YKRPLLVHAEM  233 (399)
Q Consensus       223 ~g~~v~~H~~~  233 (399)
                      +|+++.+|+..
T Consensus       234 ~g~~v~~H~~~  244 (406)
T PRK09356        234 LGLPVKIHAEQ  244 (406)
T ss_pred             CCCCEEEEEec
Confidence            99999999853

>PRK08393 N-ethylammeline chlorohydrolase; Provisional

Probab=99.80  E-value=9.1e-18  Score=165.36  Aligned_cols=176  Identities=16%  Similarity=0.170  Sum_probs=106.3

Q ss_pred             ccEEEEccEEEcCCCc--eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC---C----
Q 015826           43 NQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR---T----  113 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~---~----  113 (399)
                      ++++|+|++|+++++.  .+++|+|+||+|++|++....    ++.++||++|++|+|||||+|+|+.+...   .    
T Consensus         1 ~~~~i~~~~i~~~~~~~~~~~~i~i~~g~I~~v~~~~~~----~~~~~id~~~~~v~Pg~vd~H~H~~~~~~rg~~~~~~   76 (424)
T PRK08393          1 MSILIKNGYVIYGENLKVIRADVLIEGNKIVEVKRNINK----PADTVIDASGSVVSPGFINAHTHSPMVLLRGLADDVP   76 (424)
T ss_pred             CeEEEECcEEEeCCCCceecceEEEECCEEEEecCCCCC----CCCeEEeCCCCEEccCeeeeccCcchHhhhhccCCCC
Confidence            3689999999998773  468999999999999875322    24579999999999999999999864311   0    


Q ss_pred             ----------------CcCch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeC
Q 015826          114 ----------------EWEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP  173 (399)
Q Consensus       114 ----------------~~e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  173 (399)
                                      +.+++    .....+++++||||++|+..       ..+.+.+......-+..+.++......+
T Consensus        77 l~~~l~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~GvTtv~d~~~-------~~~~~~~a~~~~G~r~~~~~~~~~~~~~  149 (424)
T PRK08393         77 LMEWLQNYIWPRERKLKRKDIYWGAYLGLLEMIKSGTTTFVDMYF-------HMEEVAKATLEVGLRGYLSYGMVDLGDE  149 (424)
T ss_pred             HHHHHHhhhccccccCCHHHHHHHHHHHHHHHHhcCceEEecccc-------CHHHHHHHHHHhCCeEEEeceEecCCCc
Confidence                            00122    23456778999999998862       1222222222211122222211110011


Q ss_pred             CC-hhhHHHHHHHHH----cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015826          174 EN-AYNASALEALLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE  232 (399)
Q Consensus       174 ~~-~~~~~~l~~l~~----~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~  232 (399)
                      .. .+.+++..++++    .+...+...+.++.   ...+++++++++++.|+++|+++++|+.
T Consensus       150 ~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~p~~---~~~~s~~~l~~~~~~A~~~g~~v~~H~~  210 (424)
T PRK08393        150 EKREKEIKETEKLMEFIEKLNSPRVHFVFGPHA---PYTCSLALLKWVREKAREWNKLITIHLS  210 (424)
T ss_pred             cchHHHHHHHHHHHHHHhcCCCCceEEEEeCCc---CCcCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence            11 111222222221    12222333333321   2357899999999999999999999974

>PRK07572 cytosine deaminase; Validated

Probab=99.80  E-value=2.9e-17  Score=161.86  Aligned_cols=271  Identities=16%  Similarity=0.172  Sum_probs=154.9

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC---CCC-----
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRT-----  113 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~~-----  113 (399)
                      |++++|+|++++++.  ...+|.|+||+|++|++..+.    ...++||++|++|+|||||+|+|+...   +..     
T Consensus         1 ~~~~~i~~~~i~~~~--~~~~i~i~~g~I~~v~~~~~~----~~~~~id~~g~~~~PG~id~h~h~~~~~~~~~~~~~~~   74 (426)
T PRK07572          1 MFDLIVRNANLPDGR--TGIDIGIAGGRIAAVEPGLQA----EAAEEIDAAGRLVSPPFVDPHFHMDATLSYGLPRVNAS   74 (426)
T ss_pred             CCcEEEECeEECCCC--eeEEEEEECCEEEEecCCCCC----CcCceEeCCCCEEcccceehhhCcchhhccCCCCCCCC
Confidence            356889999999865  357899999999999875322    245799999999999999999999653   111     


Q ss_pred             -----------------CcCch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeee
Q 015826          114 -----------------EWEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV  172 (399)
Q Consensus       114 -----------------~~e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (399)
                                       +.+++    ....+.++++|||+++++.....+.......+.+..+...  ..++..... +.
T Consensus        75 g~l~e~l~~~~~~~~~~t~edl~~~a~~~~~e~l~~G~Ttvrd~~d~~~~~~~~~~a~~~~~~~~~--~~~~~~~~a-~~  151 (426)
T PRK07572         75 GTLLEGIALWGELKPLLTQEALVERALRYCDWAVARGLLAIRSHVDVCDPRLLAVEALLEVRERVA--PYLDLQLVA-FP  151 (426)
T ss_pred             CCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEeeccccCCCcccHHHHHHHHHHHhh--ccceEEEEe-cc
Confidence                             11222    2345678999999999986211222112222222222211  222322111 11


Q ss_pred             C----CChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhchhHHhhccCc
Q 015826          173 P----ENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSERHVKLEDDT  247 (399)
Q Consensus       173 ~----~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~~~~~~~  247 (399)
                      .    ......+.++++++.|++.+...  ++. ......+.++++.++++|+++|+++.+|+ +..+...         
T Consensus       152 ~~g~~~~~~~~~~~~~~l~~g~d~iGg~--p~~-~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~---------  219 (426)
T PRK07572        152 QDGVLRSPGAVDNLERALDMGVDVVGGI--PHF-ERTMADGAESVRLLCEIAAERGLRVDMHCDESDDPLS---------  219 (426)
T ss_pred             ChhhccCccHHHHHHHHHHcCCCEEeCC--CCC-ccccchHHHHHHHHHHHHHHcCCCeEEEECCCCChhH---------
Confidence            0    11224567788888888766321  110 01111224899999999999999999998 4333211         


Q ss_pred             CCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh-----hHHHHHHHHHHHCCCCEEEEcccc
Q 015826          248 LDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLMEAKTNGDSITVETCPH  322 (399)
Q Consensus       248 ~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-----~~~l~~i~~ak~~G~~vt~e~~p~  322 (399)
                                         .++.+......+.++    .+ ++.+.|....     ..+-+.++..+++|+.++  .||.
T Consensus       220 -------------------~~~~~~~~~~~~~G~----~~-~v~~~H~~~l~~~~~~~~~~~~~~la~~g~~vv--~~P~  273 (426)
T PRK07572        220 -------------------RHIETLAAETQRLGL----QG-RVAGSHLTSMHSMDNYYVSKLIPLMAEAGVNAI--ANPL  273 (426)
T ss_pred             -------------------HHHHHHHHHHHHhCC----CC-CEEEEccchhhcCCHHHHHHHHHHHHHcCCeEE--ECch
Confidence                               122222333333321    13 6778887532     133456666677776554  4563


Q ss_pred             c-cccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          323 Y-LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       323 ~-L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                      . +.+.       + .....|.-+   ....+.+.++.|.-.++|||..
T Consensus       274 ~n~~l~-------~-~~~~~~~~~---g~~~v~~l~~~GV~v~lGtD~~  311 (426)
T PRK07572        274 INITLQ-------G-RHDTYPKRR---GMTRVPELMAAGINVAFGHDCV  311 (426)
T ss_pred             hhhhhc-------C-CCCCCCCCC---CCcCHHHHHHCCCcEEEecCCC
Confidence            2 1111       0 000012111   2234677788899999999984

>PRK07213 chlorohydrolase; Provisional

Probab=99.79  E-value=1e-17  Score=162.35  Aligned_cols=167  Identities=19%  Similarity=0.216  Sum_probs=101.2

Q ss_pred             EEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC---------
Q 015826           45 YWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---------  113 (399)
Q Consensus        45 ~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~---------  113 (399)
                      ++|+|++|+++..  ..+++|+|+||+|++|++..      ++.++||++|++| |||||+|+|+.+....         
T Consensus         2 ~li~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~------~~~~~id~~g~~v-PGlvd~H~H~~~~~~rg~~~~~~l~   74 (375)
T PRK07213          2 LVYLNGNFLYGEDFEPKKGNLVIEDGIIKGFTNEV------HEGNVIDAKGLVI-PPLINAHTHIGDSSIKDIGIGKSLD   74 (375)
T ss_pred             EEEEeeEEEeCCCCceeeeEEEEECCEEEEeccCC------CCCeEEeCCCCEe-cceeeeccccCchhhhcCCCCCCHH
Confidence            5799999999765  35789999999999998641      2457999999999 9999999999764110         


Q ss_pred             C-----------------cCch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeee-
Q 015826          114 E-----------------WEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL-  171 (399)
Q Consensus       114 ~-----------------~e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  171 (399)
                      .                 .+++    ...+.+++++||||++|+. ..  .   ...+....+...... +...+.+.. 
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~-~~--~---~~~~~~~~~a~~~~~-~r~~~~~~~~  147 (375)
T PRK07213         75 ELVKPPNGLKHKFLNSCSDKELVEGMKEGLYDMYNNGIKAFCDFR-EG--G---IKGINLLKKASSDLP-IKPIILGRPT  147 (375)
T ss_pred             HHccCCCcchHHHHhcCCHHHHHHHHHHHHHHHHHcCCeEEEEhh-hc--C---hhHHHHHHHHHHcCC-CceEEecCCC
Confidence            0                 0111    2335667899999999974 11  1   111222222222111 111111100 


Q ss_pred             eCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          172 VPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       172 ~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ........+.+++.++. ..++.    .+   ....++.++++++++.|+++|+++++|+.+
T Consensus       148 ~~~~~~~~~~~~~~~~~-~~g~~----~~---~~~~~s~~~l~~~~~~A~~~g~~v~~H~~e  201 (375)
T PRK07213        148 EADENELKKEIREILKN-SDGIG----LS---GANEYSDEELKFICKECKREKKIFSIHAAE  201 (375)
T ss_pred             cccchhhHHHHHHHHHh-ccccc----cc---ccccCCHHHHHHHHHHHHHcCCEEEEeeCC
Confidence            00111223334443331 22221    11   123568899999999999999999999843

>TIGR02967 guan_deamin guanine deaminase

Probab=99.78  E-value=3.8e-17  Score=160.09  Aligned_cols=171  Identities=17%  Similarity=0.181  Sum_probs=98.5

Q ss_pred             eeeEEEEECCEEEEeccCCCCCCC-CCCCcEEeCCCCEEecceeecccccCCCCCC--------C---------------
Q 015826           59 ISGAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT--------E---------------  114 (399)
Q Consensus        59 ~~~~V~I~dG~I~~Ig~~~~~~~~-~~~~~vID~~G~~vlPGlID~H~H~~~~~~~--------~---------------  114 (399)
                      .+++|+|+||||++||+..+.... +++.++||++|++|||||||+|+|+.+....        .               
T Consensus         5 ~~~~V~V~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~~v~PGlId~H~Hl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~   84 (401)
T TIGR02967         5 EDGLLVVENGRIVAVGDYAELKETLPAGVEIDDYRGHLIMPGFIDTHIHYPQTEMIASYGEQLLEWLEKYTFPTEARFAD   84 (401)
T ss_pred             eceEEEEECCEEEEecCcchhhhccCCCCeEEeCCCCEEecceeecccCchhhhhcccCCchHHHHHhhCcCccccccCC
Confidence            368999999999999986432111 1245799999999999999999998643110        0               


Q ss_pred             cCch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeee-e----eCCChhhHHHHHHH
Q 015826          115 WEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG-L----VPENAYNASALEAL  185 (399)
Q Consensus       115 ~e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~l~~l  185 (399)
                      .+..    .....+++++||||++|+. ...+  .....+.+..+....+.......... .    .....+..+..+++
T Consensus        85 ~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~~--~~~~~~~~a~~~~G~R~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~  161 (401)
T TIGR02967        85 PDHAEEVAEFFLDELLRNGTTTALVFA-TVHP--ESVDALFEAALKRGMRMIAGKVLMDRNAPDYLRDTAESSYDESKAL  161 (401)
T ss_pred             HHHHHHHHHHHHHHHHhCCCcEEEecc-ccCH--HHHHHHHHHHHHCCCeEEEeeeeecCCCCcccccCHHHHHHHHHHH
Confidence            0011    1224578999999999986 2221  11122222222111111111111100 0    01111223344444


Q ss_pred             HH--cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc-CCCEEEecC-Chh
Q 015826          186 LN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAE-MEK  235 (399)
Q Consensus       186 ~~--~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~-~~~  235 (399)
                      ++  .+...++..+.++.   .+.+++++|+++++.|+++ |+++++|+. +..
T Consensus       162 i~~~~~~g~i~~~~~~~~---~~~~s~e~l~~~~~~A~~~~g~~v~~H~~e~~~  212 (401)
T TIGR02967       162 IERWHGKGRLLYAVTPRF---APTSSPEQLAAAGELAKEYPDVYVQTHLSENKD  212 (401)
T ss_pred             HHHHhCcCCceEEEECCc---CCcCcHHHHHHHHHHHHhCCCCeeEEEECCCch
Confidence            43  22223555555532   2367899999999999999 999999974 443

This model describes guanine deaminase, which hydrolyzes guanine to xanthine and ammonia. Xanthine can then be converted to urate by xanthine dehydrogenase, and urate subsequently degraded. In some bacteria, the guanine deaminase gene is found near the xdhABC genes for xanthine dehydrogenase. Non-homologous forms of guanine deaminase also exist, as well as distantly related forms outside the scope of this model.

>cd01299 Met_dep_hydrolase_A Metallo-dependent hydrolases, subgroup A is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=99.78  E-value=1.6e-18  Score=166.36  Aligned_cols=142  Identities=22%  Similarity=0.163  Sum_probs=92.9

Q ss_pred             cEEeCCCCEEecceeecccccCCCCCCCc------C-----chHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHH
Q 015826           87 QVVDYGEAVIMPGLIDVHAHLDDPGRTEW------E-----GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVD  155 (399)
Q Consensus        87 ~vID~~G~~vlPGlID~H~H~~~~~~~~~------e-----~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~  155 (399)
                      ++||++|++|||||||+|+|+........      .     .....++.++++|||||+|+. +..+.    . ++..++
T Consensus         2 ~vID~~g~~v~PGliD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~g-~~~~~----~-~~~~~~   75 (342)
T cd01299           2 QVIDLGGKTLMPGLIDAHTHLGSDPGDLPLDLALPVEYRTIRATRQARAALRAGFTTVRDAG-GADYG----L-LRDAID   75 (342)
T ss_pred             cEEeCCCCEECCCeeeeeeeccccCCCccccccCCHHHHHHHHHHHHHHHHhCCCcEEEeCC-CcchH----H-HHHHHH
Confidence            68999999999999999999876432111      1     112467889999999999997 22111    1 222222


Q ss_pred             HHh---------------ccCceeEEe---------eeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCC-----CCCC
Q 015826          156 AAE---------------KRIYVDVGF---------WGGLVPENAYNASALEALLNAGVLGLKSFMCPSGI-----NDFP  206 (399)
Q Consensus       156 ~~~---------------~~~~~~~~~---------~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~-----~~~~  206 (399)
                      ...               ...+.++..         +.....+..+.+++++++++.|++.||+|+.+...     .+.+
T Consensus        76 ~g~~~gPr~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G~~~iK~~~~g~~~~~~~~~~~~  155 (342)
T cd01299          76 AGLIPGPRVFASGRALSQTGGHGDPRGLSGLFPAGGLAAVVDGVEEVRAAVREQLRRGADQIKIMATGGVLSPGDPPPDT  155 (342)
T ss_pred             cCCccCCceeecchhhcccCCCCccccccccccccCCcceecCHHHHHHHHHHHHHhCCCEEEEeccCCcCCCCCCCccc
Confidence            111               011112110         11112233445778899999999999999864211     1113


Q ss_pred             CCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          207 MTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       207 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      .++.++++++++.|+++|+++.+|+.+.
T Consensus       156 ~~~~e~l~~~~~~A~~~g~~v~~H~~~~  183 (342)
T cd01299         156 QFSEEELRAIVDEAHKAGLYVAAHAYGA  183 (342)
T ss_pred             CcCHHHHHHHHHHHHHcCCEEEEEeCCH
Confidence            5789999999999999999999999653

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.

>PRK06038 N-ethylammeline chlorohydrolase; Provisional

Probab=99.77  E-value=4.7e-17  Score=160.52  Aligned_cols=180  Identities=16%  Similarity=0.171  Sum_probs=107.7

Q ss_pred             CccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC------
Q 015826           42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT------  113 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~------  113 (399)
                      |++++|+|++|+++++  ..+++|+|+||+|++|++....    ++.++||++|++|+|||||+|+|+....+.      
T Consensus         1 ~~~~~~~~~~i~~~~~~~~~~~~v~v~~g~I~~i~~~~~~----~~~~~id~~g~~v~PG~vd~H~H~~~~~~~g~~~~~   76 (430)
T PRK06038          1 MADIIIKNAYVLTMDAGDLKKGSVVIEDGTITEVSESTPG----DADTVIDAKGSVVMPGLVNTHTHAAMTLFRGYADDL   76 (430)
T ss_pred             CCCEEEEccEEEECCCCeeeccEEEEECCEEEEecCCCCC----CCCEEEeCCCCEEecCeeecccCcchhhhhhccCCC
Confidence            3468999999997654  3468999999999999985322    245799999999999999999999754110      


Q ss_pred             -----------------CcCch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeee
Q 015826          114 -----------------EWEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV  172 (399)
Q Consensus       114 -----------------~~e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (399)
                                       +.++.    .....+++++||||++|+..  .     ...+.+..+...-+....++......
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~e~l~~G~Ttv~D~~~--~-----~~~~~~a~~~~GiR~~~~~~~~d~~~  149 (430)
T PRK06038         77 PLAEWLNDHIWPAEAKLTAEDVYAGSLLACLEMIKSGTTSFADMYF--Y-----MDEVAKAVEESGLRAALSYGMIDLGD  149 (430)
T ss_pred             CHHHHHHhhhhhchhcCCHHHHHHHHHHHHHHHHhcCceeEEcccc--C-----HHHHHHHHHHhCCeEEEEchhccCCC
Confidence                             00111    12345678999999998862  1     11111111111111111111000000


Q ss_pred             CC-ChhhHHHHHHHHH--cC--CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          173 PE-NAYNASALEALLN--AG--VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       173 ~~-~~~~~~~l~~l~~--~G--~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      .. ..+.+++..++++  .+  ...++..+.+..   ...+++++++++++.|+++|+++++|+....
T Consensus       150 ~~~~~~~l~~~~~~i~~~~~~~~g~v~~~~~~~~---~~~~s~e~l~~~~~~A~~~g~~v~~H~~e~~  214 (430)
T PRK06038        150 DEKGEAELKEGKRFVKEWHGAADGRIKVMYGPHA---PYTCSEEFLSKVKKLANKDGVGIHIHVLETE  214 (430)
T ss_pred             ccchHHHHHHHHHHHHHhcCCCCCceEEEEeCCc---CccCCHHHHHHHHHHHHHcCCcEEEEcCCCH
Confidence            00 1112333333332  11  123444444432   2367899999999999999999999985443

>PRK09230 cytosine deaminase; Provisional

Probab=99.77  E-value=2.9e-16  Score=154.36  Aligned_cols=271  Identities=19%  Similarity=0.258  Sum_probs=151.8

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC---CCC---C--
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRT---E--  114 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~~---~--  114 (399)
                      ..++|+|++++++..  ..+|.|+||+|++|++..+..  .++.++||++|++|||||||+|+|+...   +..   .  
T Consensus         4 ~~~li~~~~~~~~~~--~~~i~i~~g~I~~i~~~~~~~--~~~~~~id~~g~~v~PGlid~H~H~~~~~~~~~~~~~~~~   79 (426)
T PRK09230          4 ALMTIKNARLPGKEG--LWQITIEDGKISAIEPQSEAS--LEAGEVLDAEGGLAIPPFIEPHIHLDTTQTAGEPNWNQSG   79 (426)
T ss_pred             ceEEEECcEEcCCCe--eEEEEEECCEEEEecCCCCCC--CCCCceEeCCCCEeccceeEEEEccccceecCCCccCCCC
Confidence            478999999988543  468999999999999864321  1256799999999999999999999764   111   0  


Q ss_pred             -----------------cCch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeee-
Q 015826          115 -----------------WEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-  172 (399)
Q Consensus       115 -----------------~e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  172 (399)
                                       .+++    .....+++++|||+++++.....+.....+.+.+..+..+.  ..+++...... 
T Consensus        80 ~l~~~i~~~~~~~~~~t~ed~~~~a~~~~~e~l~~GvTtvr~~~d~~~~~~~~~~a~~~~~~~~~~--~~~~~i~a~~~~  157 (426)
T PRK09230         80 TLFEGIERWAERKALLTHEDVKQRAWQTLKWQIANGIQHVRTHVDVSDPTLTALKAMLEVKEEVAP--WVDLQIVAFPQE  157 (426)
T ss_pred             CHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHcCcccEEeccccCCcchhHHHHHHHHHHHhhC--cceEEEEeccCc
Confidence                             0111    23356678999999999873111111112222222222222  22333211100 


Q ss_pred             --CCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCC---CCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCc
Q 015826          173 --PENAYNASALEALLNAGVLGLKSFMCPSGINDFPM---TNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDT  247 (399)
Q Consensus       173 --~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~---~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~  247 (399)
                        -+.+...+.+++..+.+...+..  .+    ..+.   .+.+.++.+++.|+++|+++++|+.......         
T Consensus       158 ~~~~~~~~~~~l~~a~~~~~~~vg~--~p----~~~~~~~~~~e~l~~~~~~A~~~g~~~~~H~~E~~~~~---------  222 (426)
T PRK09230        158 GILSYPNGEALLEEALRLGADVVGA--IP----HFEFTREYGVESLHKAFALAQKYDRLIDVHCDEIDDEQ---------  222 (426)
T ss_pred             cccCCccHHHHHHHHHHcCCCEEeC--CC----CccccchhHHHHHHHHHHHHHHhCCCcEEEECCCCCcc---------
Confidence              01122334556666655543321  11    1111   2578999999999999999999985322100         


Q ss_pred             CCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh-----hHHHHHHHHHHHCCCCEEEEcccc
Q 015826          248 LDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLMEAKTNGDSITVETCPH  322 (399)
Q Consensus       248 ~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-----~~~l~~i~~ak~~G~~vt~e~~p~  322 (399)
                                        .....+.+++.++.+     .+.++.+.|....     .+.-+.++..++.|+.  +.+||.
T Consensus       223 ------------------~~~~~~~~~~~~~~g-----l~~~v~~~H~~~l~~~~~~~~~~~~~~La~~gv~--vv~cP~  277 (426)
T PRK09230        223 ------------------SRFVETVAALAHREG-----MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGIN--FVANPL  277 (426)
T ss_pred             ------------------hHHHHHHHHHHHHhC-----CCCCEEEEecCchhcCCHHHHHHHHHHHHHcCCe--EEECcc
Confidence                              001223344444432     1446777776543     0134566666767654  456774


Q ss_pred             c-cccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          323 Y-LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       323 ~-L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                      . +.+. .       ...-.| .+.  ....+.+.++.|.--++|||..
T Consensus       278 sn~~l~-~-------~~~~~p-~~~--g~~pi~~l~~aGv~V~lGTD~~  315 (426)
T PRK09230        278 VNIHLQ-G-------RFDTYP-KRR--GITRVKEMLEAGINVCFGHDDV  315 (426)
T ss_pred             hhhhhc-C-------CCCCCC-CCC--CCcCHHHHHHCCCeEEEecCCC
Confidence            2 1111 0       000011 111  1112556677899999999973

>TIGR03583 EF_0837 probable amidohydrolase EF_0837/AHA_3915

Probab=99.77  E-value=7.6e-17  Score=155.88  Aligned_cols=179  Identities=18%  Similarity=0.245  Sum_probs=111.4

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCC-CEEecceeecccccCCCCCCCcCchHHH
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGE-AVIMPGLIDVHAHLDDPGRTEWEGFPSG  121 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G-~~vlPGlID~H~H~~~~~~~~~e~~~~~  121 (399)
                      ++++|+|++|+++.   ..+|.|+||||++|++....    ++.++||++| ++|+|||||+|+|+..++....++..  
T Consensus         1 ~~~~i~n~~i~~~~---~~~v~i~~g~I~~v~~~~~~----~~~~~iD~~g~~~l~PG~ID~H~H~~~~~~~~~~~~~--   71 (365)
T TIGR03583         1 YDLLIKNGRTVNGT---PVDIAIEDGKIAAVGTTITG----SAKQTIDLEGETYVSAGWIDDHTHCFPKSALYYDEPD--   71 (365)
T ss_pred             CcEEEECcEEecCC---eeEEEEECCEEEEecCCCCC----CCCeEEECCCCeEEecCEEEeeeccCCCcccccCCHh--
Confidence            46899999999853   45899999999999864322    2457999999 99999999999999865443333332  


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC--ceeEEeeeeeeCCC-----hhhHHHHHHHHH---cCCc
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI--YVDVGFWGGLVPEN-----AYNASALEALLN---AGVL  191 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-----~~~~~~l~~l~~---~G~~  191 (399)
                       ..++++||||+++++ .+.+  .+.+.+.+..+....+.  .+++..++......     ....++++++.+   .++.
T Consensus        72 -~~a~~~GvTt~~~~~-~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~vv  147 (365)
T TIGR03583        72 -EIGVKTGVTTVVDAG-STGA--DDIDDFYRLAQQAKTNVFALLNISRIGLVAQDELADLSNLDASAVKQAVERYPDFIV  147 (365)
T ss_pred             -HhhhcCceeEEEeCC-CCCC--CCHHHHHHHHHhhCCcEEEEeeehhccccChhhhhChHHhHHHHHHHHHHhCcCcEE
Confidence             446899999999987 3222  34444544444332221  12222222211111     113455555554   2466


Q ss_pred             EEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhh
Q 015826          192 GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG  236 (399)
Q Consensus       192 ~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~  236 (399)
                      +||.+++....+.. ..++..+.+.+..+ ++|+++.+|+++...
T Consensus       148 ~~~~~~t~~~i~E~-gl~~~~~~~~l~~~-~~~~pv~vH~~~a~~  190 (365)
T TIGR03583       148 GLKARMSKSVVGDN-GIEPLEIAKQIQQE-NLELPLMVHIGSAPP  190 (365)
T ss_pred             EEEEeecccccccC-CcCHHHHHHHHHHh-cCCCcEEEEeCCCcc
Confidence            78888774322211 22355555555544 789999999977653

Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. These proteins resemble aminohydrolases (see pfam01979), including dihydroorotases. The function is unknown.

>PRK09228 guanine deaminase; Provisional

Probab=99.77  E-value=5.1e-17  Score=160.17  Aligned_cols=169  Identities=17%  Similarity=0.182  Sum_probs=97.1

Q ss_pred             eeeEEEEECCEEEEeccCCCCCCCCC-CCcEEeCCCCEEecceeecccccCCCCCCC-----------------------
Q 015826           59 ISGAVEIKEGNIISIVSEEDWPRNSK-TGQVVDYGEAVIMPGLIDVHAHLDDPGRTE-----------------------  114 (399)
Q Consensus        59 ~~~~V~I~dG~I~~Ig~~~~~~~~~~-~~~vID~~G~~vlPGlID~H~H~~~~~~~~-----------------------  114 (399)
                      .+++|+|+||+|++||+..+.....+ +.++||++|++|+|||||+|+|+.+.....                       
T Consensus        30 ~~g~I~I~~g~I~~Vg~~~~~~~~~~~~~~viD~~g~lv~PGlVn~H~H~~~~~~~g~~~~~l~~wl~~~~~~~e~~~~~  109 (433)
T PRK09228         30 EDGLLLVEDGRIVAAGPYAELRAQLPADAEVTDYRGKLILPGFIDTHIHYPQTDMIASYGEQLLDWLNTYTFPEERRFAD  109 (433)
T ss_pred             CCeEEEEECCEEEEEcChHHhhhhcCCCCeEEeCCCCEEecceecccccccchhhccCCchHHHHHHHhhhhHHHHHhCC
Confidence            37899999999999998643221112 258999999999999999999986542110                       


Q ss_pred             cCchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh---ccCceeEEeeeeeeC-----CChhhHHHH
Q 015826          115 WEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE---KRIYVDVGFWGGLVP-----ENAYNASAL  182 (399)
Q Consensus       115 ~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~~l  182 (399)
                      .+..+    ....+++++||||++|+. ...     ........+...   -+..+.+.......+     ...+..++.
T Consensus       110 ~~~~~~~a~~~~~e~l~~G~Ttv~d~~-~~~-----~~~~~~~~~a~~~~GiR~~~~~~~~~~~~~~~~~~~~~~~l~~~  183 (433)
T PRK09228        110 PAYAREVAEFFLDELLRNGTTTALVFG-TVH-----PQSVDALFEAAEARNMRMIAGKVLMDRNAPDGLRDTAESGYDDS  183 (433)
T ss_pred             HHHHHHHHHHHHHHHHhCCceEEEecc-ccC-----HHHHHHHHHHHHHcCCeEEeeeeeecCCCCcccccCHHHHHHHH
Confidence            01111    124467999999999875 211     122222222222   122221111110001     111122233


Q ss_pred             HHHHH--cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc-CCCEEEec-CChhh
Q 015826          183 EALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHA-EMEKG  236 (399)
Q Consensus       183 ~~l~~--~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~-~~~~~  236 (399)
                      .++++  .+...++..++++.   .+.++++.++++.+.|+++ |+++++|+ |+...
T Consensus       184 ~~~~~~~~~~~~~~~~~~p~~---~~t~s~~~l~~~~~lA~~~~~~~i~~Hl~E~~~e  238 (433)
T PRK09228        184 KALIERWHGKGRLLYAITPRF---APTSTPEQLEAAGALAREHPDVWIQTHLSENLDE  238 (433)
T ss_pred             HHHHHHHhCCCCceEEEECCc---CCcCCHHHHHHHHHHHHHCCCCceEEeecCChhH
Confidence            33332  12123444444432   2367899999999999998 99999997 44443

>PRK08418 chlorohydrolase; Provisional

Probab=99.76  E-value=3.3e-17  Score=160.19  Aligned_cols=181  Identities=14%  Similarity=0.152  Sum_probs=104.9

Q ss_pred             EEEEccEEEcCCC---c-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC-------
Q 015826           45 YWLTSKRIVTPKG---V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-------  113 (399)
Q Consensus        45 ~li~n~~vv~~~~---~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-------  113 (399)
                      .+|+|++|+++++   . .+++|+|+ |+|++|++..+.....++.++||++|++|+|||||+|+|+.+....       
T Consensus         2 ~~i~~~~v~t~~~~~~~~~~~~v~v~-~~I~~ig~~~~~~~~~~~~~vid~~g~~v~PG~Vn~H~H~~~~~~rg~~~~~~   80 (408)
T PRK08418          2 KIIGASYIFTCDENFEILEDGAVVFD-DKILEIGDYENLKKKYPNAKIQFFKNSVLLPAFINPHTHLEFSANKTTLDYGD   80 (408)
T ss_pred             EEEEccEEEecCCCCceeeccEEEEC-CEEEEecCHHHHHhhCCCCcEEecCCcEEccCccccccchhhhhhccccCCCc
Confidence            4689999998763   2 47899999 9999999753221111244689999999999999999999643211       


Q ss_pred             --Cc-------------Cch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC
Q 015826          114 --EW-------------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE  174 (399)
Q Consensus       114 --~~-------------e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (399)
                        .|             +..    ..+..+++++||||+.|+. .. .     ..++...+.. -+..+..... +....
T Consensus        81 ~~~wl~~~~~~~~~l~~~~~~~~~~~~~~E~l~~GtTtv~d~~-~~-~-----~~~~a~~~~G-iR~~~~~~~~-~~~~~  151 (408)
T PRK08418         81 FIPWLGSVINHREDLLEKCKGALIQQAINEMLKSGVGTIGAIS-SF-G-----IDLEICAKSP-LRVVFFNEIL-GSNAS  151 (408)
T ss_pred             hHHHHHHHhhhhhhcCHHHHHHHHHHHHHHHHhcCceEEEEee-cc-h-----hhHHHHHhcC-CeEEEEeeee-CCCcc
Confidence              01             011    1234577999999999886 21 1     1112111111 1111111111 11110


Q ss_pred             C-hhhHHH-HHHHHH---cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhch
Q 015826          175 N-AYNASA-LEALLN---AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSE  238 (399)
Q Consensus       175 ~-~~~~~~-l~~l~~---~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~  238 (399)
                      . ....+. ++....   .....++..++++.   ...++++.++++.+.|+++|+++++|+ |+..+..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aph~---~~t~s~e~l~~~~~~A~~~~~~i~~H~~E~~~E~~  218 (408)
T PRK08418        152 AVDELYQDFLARFEESKKFKSKKFIPAIAIHS---PYSVHPILAKKALQLAKKENLLVSTHFLESKAERE  218 (408)
T ss_pred             chhhhHHHHHHHHHhhhcccCCceeEEEeCCC---CCCCCHHHHHHHHHHHHHcCCeEEEEecCCHHHHH
Confidence            0 011111 111111   12223555555542   236789999999999999999999996 5555543

>cd01303 GDEase Guanine deaminase (GDEase)

Probab=99.75  E-value=1.5e-16  Score=156.77  Aligned_cols=168  Identities=19%  Similarity=0.202  Sum_probs=96.5

Q ss_pred             eeeEEEEECCEEEEeccCCCCC-CCCCCCcEEeCCCCEEecceeecccccCCCCCC---------Cc-------------
Q 015826           59 ISGAVEIKEGNIISIVSEEDWP-RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---------EW-------------  115 (399)
Q Consensus        59 ~~~~V~I~dG~I~~Ig~~~~~~-~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~---------~~-------------  115 (399)
                      .+++|+|+||+|++||+..+.. ..+++.++||++|++|||||||+|+|+.+..+.         .|             
T Consensus        25 ~~g~V~v~~g~I~~vG~~~~~~~~~~~~~~viD~~g~~v~PGlVn~H~Hl~~~~~rg~~~~~~l~~wl~~~~~~~e~~~~  104 (429)
T cd01303          25 EDGLIVVVDGNIIAAGAAETLKRAAKPGARVIDSPNQFILPGFIDTHIHAPQYANIGSGLGEPLLDWLETYTFPEEAKFA  104 (429)
T ss_pred             CCeEEEEECCEEEEeCchhhhhhhcCCCceEEcCCCCEEecceeeeeecccccccccccCCCcHHHHHHhhhhHHHHhcC
Confidence            4789999999999999854321 112356899999999999999999998653110         00             


Q ss_pred             --Cch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc---cCceeEEeeeeeeCC-----ChhhHHH
Q 015826          116 --EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK---RIYVDVGFWGGLVPE-----NAYNASA  181 (399)
Q Consensus       116 --e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-----~~~~~~~  181 (399)
                        ++.    .....+++++||||++++. ...     ........+.+..   +..+.+.......+.     ..+.++.
T Consensus       105 ~~~~~~~~a~~~~~e~l~~GvTtv~d~~-~~~-----~~~~~~~~~a~~~~G~R~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (429)
T cd01303         105 DPAYAREVYGRFLDELLRNGTTTACYFA-TIH-----PESTEALFEEAAKRGQRAIAGKVCMDRNAPEYYRDTAESSYRD  178 (429)
T ss_pred             CHHHHHHHHHHHHHHHHhCCceEEEeec-ccC-----hhHHHHHHHHHHHhCCeEEEeeeeecCCCCcccccCHHHHHHH
Confidence              011    1234567899999999876 211     1122222222221   222211111100011     1111222


Q ss_pred             HHHHHH--cCC-cEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcC-CCEEEec-CChh
Q 015826          182 LEALLN--AGV-LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK-RPLLVHA-EMEK  235 (399)
Q Consensus       182 l~~l~~--~G~-~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g-~~v~~H~-~~~~  235 (399)
                      ..++++  .+. ..+...+.++.   ...++++.++++++.|+++| +++++|+ ++.+
T Consensus       179 ~~~~i~~~~~~~~~v~~~~~p~~---~~~~s~e~l~~~~~~A~~~g~~~v~~H~~e~~~  234 (429)
T cd01303         179 TKRLIERWHGKSGRVKPAITPRF---APSCSEELLAALGKLAKEHPDLHIQTHISENLD  234 (429)
T ss_pred             HHHHHHHHhCcCCceEEEEecCc---CCcCCHHHHHHHHHHHHHCCCCeEEEeeCCCHH
Confidence            233322  111 22444444432   23578999999999999999 9999998 4443

Guanine deaminase is an aminohydrolase responsible for the conversion of guanine to xanthine and ammonia, the first step to utilize guanine as a nitrogen source. This reaction also removes the guanine base from the pool and therefore can play a role in the regulation of cellular GTP and the guanylate nucleotide pool.

>COG0402 SsnA Cytosine deaminase and related metal-dependent hydrolases [Nucleotide transport and metabolism / General function prediction only]

Probab=99.74  E-value=2.4e-16  Score=155.06  Aligned_cols=270  Identities=18%  Similarity=0.218  Sum_probs=151.4

Q ss_pred             ccEEEEccEEEcCCCc---eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC------
Q 015826           43 NQYWLTSKRIVTPKGV---ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT------  113 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~---~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~------  113 (399)
                      ..++|+|..++..++.   .+++|.|+||||+.|++..+.+   ++.++||++|++|+|||||+|+|+.+....      
T Consensus         2 ~~~~i~~~~~~~~d~~~~~~~~~~~i~~g~I~~ig~~~~~~---~~~~~iD~~~~lv~Pgfvn~H~H~~~t~~~g~~~~~   78 (421)
T COG0402           2 TMLLIRGDLLLTNDPEGRIEDGDLVIEDGKIVAIGANAEGP---PDEEVIDAKGKLVLPGFVNAHTHLDQTLLRGLADDL   78 (421)
T ss_pred             cceeeeCcEEeecCcccceeeeeEEEcCCEEEEeCCcCCCC---CCceeecCCCCEeccCccccccchHHHHHhhhhccc
Confidence            3567888888875442   4699999999999999875432   357899999999999999999998654210      


Q ss_pred             ------------------CcCchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeee--
Q 015826          114 ------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG--  169 (399)
Q Consensus       114 ------------------~~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  169 (399)
                                        +.++++    .....++++||||+..+. +..+. .....++...+. ..+.........  
T Consensus        79 ~l~~wl~~~~~~~~~~~~~~e~~~~~a~~~~~e~l~~G~t~~~~~~-~~~~~-~~~~~~~a~~~~-g~r~~~~~~~~~~~  155 (421)
T COG0402          79 PLLEWLERYVWPREARLLTEEDLYARALLALLEMLRNGTTTARTHV-DVVAE-SADAAFEAALEV-GLRAVLGPVLQDVA  155 (421)
T ss_pred             chHHHHHHHHhHHHhhcCCHHHHHHHHHHHHHHHHhcCcccccccc-chhhh-hHHHHHHHHHHh-CCeeEeeeccccCC
Confidence                              111222    235567899999976655 21110 001122222211 111111111111  


Q ss_pred             ---eeeCCChh---hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhchhHHh
Q 015826          170 ---GLVPENAY---NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSERHVK  242 (399)
Q Consensus       170 ---~~~~~~~~---~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~~  242 (399)
                         ......+.   ..+.++++...|  .+++...++   ....++++.++.+.+.++++|+++++|+ |+.++......
T Consensus       156 ~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~---~~~~~~~~~~~~~~~l~~~~~~~v~iH~~E~~~e~~~~~~  230 (421)
T COG0402         156 FPDPGAETDEELEETEELLREAHGLG--RDVVGLAPH---FPYTVSPELLESLDELARKYGLPVHIHLAETLDEVERVLE  230 (421)
T ss_pred             CCcccccchHHHHHHHHHHHHHhcCC--CeeEEEecC---CCCCCCHHHHHHHHHHHhcCCCceEEEecCcHHHHHHHHh
Confidence               00111111   223344444445  344444443   1246899999999999999999999996 66655443332


Q ss_pred             hccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEcccc
Q 015826          243 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH  322 (399)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~  322 (399)
                      ..+             .+       .+...-....    .. ..-+-+|+.|++.  +.+++++   +.  .+++-.||-
T Consensus       231 ~~g-------------~~-------~~~~~~~~g~----l~-~~~~~~H~~~~~~--~e~~~l~---~~--g~~v~~cP~  278 (421)
T COG0402         231 PYG-------------AR-------PVERLDLLGL----LG-SHTLLAHCVHLSE--EELELLA---ES--GASVVHCPR  278 (421)
T ss_pred             hcC-------------CC-------HHHHHHHcCC----CC-CCeEEEEeccCCH--HHHHHHh---hC--CCeEEECcc
Confidence            111             00       1111111111    11 1134567777766  5666666   33  456666773


Q ss_pred             ccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCc
Q 015826          323 YLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVP  374 (399)
Q Consensus       323 ~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~  374 (399)
                           .+..-..|    +.|          +++.+..|..-.++||-+.++.
T Consensus       279 -----sN~~L~sG----~~p----------~~~~~~~gv~v~~gTD~~~~~~  311 (421)
T COG0402         279 -----SNLKLGSG----IAP----------VRRLLERGVNVALGTDGAASNN  311 (421)
T ss_pred             -----hhccccCC----CCC----------HHHHHHcCCCEEEecCCccccC
Confidence                 11111111    233          5667788888899999977753

>PRK06846 putative deaminase; Validated

Probab=99.74  E-value=9.8e-16  Score=150.31  Aligned_cols=245  Identities=16%  Similarity=0.194  Sum_probs=144.8

Q ss_pred             eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC-Cc----------------------
Q 015826           59 ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-EW----------------------  115 (399)
Q Consensus        59 ~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-~~----------------------  115 (399)
                      ..++|.|+||+|++|++....+  ..+.++||++|++|+|||||+|+|+.++... ..                      
T Consensus        30 ~~~~i~i~~g~I~~i~~~~~~~--~~~~~~id~~g~~v~Pg~iD~H~H~~~~~~~~~~~~~~~~~g~~~~l~~~~~~~~~  107 (410)
T PRK06846         30 ALCTLEIQDGKIVAIRPNKQVP--DATLPTYDANGLLMLPAFREMHIHLDKTYYGGPWKACRPAKTIQDRIELEQKELPE  107 (410)
T ss_pred             eeEEEEEECCEEEEeecCCCCC--CCCCceEeCCCCEEecCEEeeeecccchhhccchhhcCCcccHHHHHhhhhhhHHH
Confidence            4679999999999999753221  1245799999999999999999999864321 00                      


Q ss_pred             --Cch----HHHHHHHHcCCeeeeecCcCCCCCCC--CcHHHHHHHHHHHhccCceeEEeeeeeeCC---ChhhHHHHHH
Q 015826          116 --EGF----PSGTKAAAAGGITTLIDMPLNSDPST--ISTETLKLKVDAAEKRIYVDVGFWGGLVPE---NAYNASALEA  184 (399)
Q Consensus       116 --e~~----~~~~~~al~~GvTtv~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~  184 (399)
                        +..    .......+..|+|+++++. +..+..  ...+.+.+.++....  .++..... +...   .....+.+++
T Consensus       108 ~~~~~~~~a~~~l~~~~~~Gtt~~r~~v-~~~~~~~~~~~~a~~e~l~e~~~--~v~~~~~a-~~~~g~~~~~~~~lL~~  183 (410)
T PRK06846        108 LLPTTQERAEKLIELLQSKGATHIRSHC-NIDPVIGLKNLENLQAALERYKD--GFTYEIVA-FPQHGLLRSNSEPLMRE  183 (410)
T ss_pred             hHHHHHHHHHHHHHHHHhCCccEEEEEE-eeCcccccchHHHHHHHHHHhhC--cceEEEEe-ccCcccCCccHHHHHHH
Confidence              000    0123345677999998886 323321  112222222222222  22222110 1110   1223467888


Q ss_pred             HHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHH
Q 015826          185 LLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW  264 (399)
Q Consensus       185 l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  264 (399)
                      .++.|+..++.. .+.   .....+.++++++++.|+++|+++++|.......                           
T Consensus       184 al~~Ga~~i~gl-~p~---~~~~~~~~~l~~~~~lA~~~g~~v~~Hv~e~~~~---------------------------  232 (410)
T PRK06846        184 AMKMGAHLVGGV-DPA---SVDGAIEKSLDTMFQIAVDFNKGVDIHLHDTGPL---------------------------  232 (410)
T ss_pred             HHHcCCCEEeCC-CCc---cCCcCHHHHHHHHHHHHHHhCCCcEEEECCCCCh---------------------------
Confidence            889998866532 221   1124678999999999999999999998643210                           


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCceEEEEcCCC-----hhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceE
Q 015826          265 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD-----ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFK  339 (399)
Q Consensus       265 E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~-----~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~  339 (399)
                      ....+.++++..++.+.     ..++++.|...     ..+..++++..++.|+.|+.. +|         . ..+    
T Consensus       233 ~~~~~~~~~~~~~~~gl-----~~~v~~~H~~~l~~~~~~e~~~li~~la~~g~~v~~~-~~---------~-~~g----  292 (410)
T PRK06846        233 GVATIKYLVETTEEAQW-----KGKVTISHAFALGDLNEEEVEELAERLAAQGISITST-VP---------I-GRL----  292 (410)
T ss_pred             hHHHHHHHHHHHHHhCC-----CCCEEEEecchhhcCCHHHHHHHHHHHHHcCCeEEEe-CC---------C-CCC----
Confidence            01133445555555421     22789999863     213344567788888877632 11         0 011    


Q ss_pred             EcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          340 CAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       340 ~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                       .||         +.+.++.|..-.+|||..
T Consensus       293 -~~p---------~~~l~~~Gv~v~lGtD~~  313 (410)
T PRK06846        293 -HMP---------IPLLHDKGVKVSLGTDSV  313 (410)
T ss_pred             -CCC---------HHHHHhCCCeEEEecCCC
Confidence             232         455667799999999963

>cd01296 Imidazolone-5PH Imidazolonepropionase/imidazolone-5-propionate hydrolase (Imidazolone-5PH) catalyzes the third step in the histidine degradation pathway, the hydrolysis of (S)-3-(5-oxo-4,5-dihydro-3H-imidazol-4-yl)propanoate to N-formimidoyl-L-glutamate

Probab=99.74  E-value=1.6e-16  Score=154.22  Aligned_cols=163  Identities=18%  Similarity=0.155  Sum_probs=92.7

Q ss_pred             EEEECCEEEEeccCCCCCC-CCCCCcEEeCCCCEEecceeecccccCCCCCC----------------------------
Q 015826           63 VEIKEGNIISIVSEEDWPR-NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT----------------------------  113 (399)
Q Consensus        63 V~I~dG~I~~Ig~~~~~~~-~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~----------------------------  113 (399)
                      |+|+||||++|++....+. .+.+.++||++|++|+|||||+|+|+......                            
T Consensus         1 i~i~~g~I~~ig~~~~~~~~~~~~~~~iD~~G~~v~Pg~vn~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (371)
T cd01296           1 IAIRDGRIAAVGPAASLPAPGPAAAEEIDAGGRAVTPGLVDCHTHLVFAGDRVDEFAARLAGASYEEILAAGGGILSTVR   80 (371)
T ss_pred             CEEECCEEEEEeCchhcccccCCCceEEECCCCEEecceeecCCCCcCCCCcHHHHHHHHCCCCHHHHHHcCCChHHHHH
Confidence            5799999999998543220 11245799999999999999999999763211                            


Q ss_pred             -----CcCch----HHHHHHHHcCCeeeeecCcC-CCCCCCCcHHHHHHHHHHHhccCceeEEeeee---eeCC-C---h
Q 015826          114 -----EWEGF----PSGTKAAAAGGITTLIDMPL-NSDPSTISTETLKLKVDAAEKRIYVDVGFWGG---LVPE-N---A  176 (399)
Q Consensus       114 -----~~e~~----~~~~~~al~~GvTtv~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~---~  176 (399)
                           +.+++    ......++++|||++.++.. +..+ ....+.++... .+.....+++.....   ..+. .   .
T Consensus        81 ~~~~~~~~d~~~~a~~~~~~~~~~Gvt~~~~~~~~~~~~-~~~~~~~~a~~-~~~~~~~~~l~~~~~~~~~~p~~~~~~~  158 (371)
T cd01296          81 ATRAASEDELFASALRRLARMLRHGTTTVEVKSGYGLDL-ETELKMLRVIR-RLKEEGPVDLVSTFLGAHAVPPEYKGRE  158 (371)
T ss_pred             HHHhCCHHHHHHHHHHHHHHHHHCCceEEEecccCCCCH-HHHHHHHHHHH-HHHhhCCCceEeeeeecccCCcccCChH
Confidence                 00111    22355678999999988421 1111 01112222222 222211222222111   1111 0   1


Q ss_pred             hhH----HH-HHHHH-HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          177 YNA----SA-LEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       177 ~~~----~~-l~~l~-~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ...    ++ ++... +.++.+++.+...      ...+.+.++++++.|+++|+++.+|+..
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~A~~~g~~v~~H~~e  215 (371)
T cd01296         159 EYIDLVIEEVLPAVAEENLADFCDVFCEK------GAFSLEQSRRILEAAKEAGLPVKIHADE  215 (371)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCEEEEeecC------CccCHHHHHHHHHHHHHCCCeEEEEEcC
Confidence            111    11 22111 2556777765322      2356899999999999999999999864

In bacteria, the enzyme is part of histidine utilization (hut) operon.

>PRK10027 cryptic adenine deaminase; Provisional

Probab=99.73  E-value=7e-16  Score=155.09  Aligned_cols=228  Identities=20%  Similarity=0.163  Sum_probs=149.3

Q ss_pred             ccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHH
Q 015826           43 NQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS  120 (399)
Q Consensus        43 ~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~  120 (399)
                      .+++|+|++|+++..  ...++|+|+||+|++|++.....   .+.++||++|++|+|||||+|+|+..+.. +.+++  
T Consensus        30 ~dllI~ng~vv~~~~~~~~~~~V~I~~GrI~~Vg~~~~~~---~~~~vIDa~G~~v~PGlIDaHvHiess~~-~p~~~--  103 (588)
T PRK10027         30 ADYIIDNVSILDLINGGEISGPIVIKGRYIAGVGAEYADA---PALQRIDARGATAVPGFIDAHLHIESSMM-TPVTF--  103 (588)
T ss_pred             CCEEEECcEEEeCCCCcEEeeEEEEECCEEEEeCCCCCCC---CCCeEEECCCCEEEECeEeccccCCcccC-CHhHH--
Confidence            578999999998643  45789999999999997643211   24579999999999999999999987654 33333  


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeee----eeeC--CC---hhhHHHHHHHHH-cCC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG----GLVP--EN---AYNASALEALLN-AGV  190 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~---~~~~~~l~~l~~-~G~  190 (399)
                       .+.++.+||||++++| ++.+.....+.++..++.+.... .++++..    ..++  .+   .-..++++++++ ..+
T Consensus       104 -a~aal~~G~TtVv~dP-hei~nv~g~~gi~~~l~~a~~~p-~~~~~~~ps~vpa~~~~Et~Ga~~~~~~~~~~l~~~~v  180 (588)
T PRK10027        104 -ETATLPRGLTTVICDP-HEIVNVMGEAGFAWFARCAEQAR-QNQYLQVSSCVPALEGCDVNGASFTLEQMLAWRDHPQV  180 (588)
T ss_pred             -HHHHHhCceEEEEcCC-CCcccCCCHHHHHHHHHHhhhCC-CeeEEeecccCcCCcccccCCCcCCHHHHHHHhcCCCc
Confidence             4568999999999999 66666666777777766654332 2322211    1111  00   113567888776 567


Q ss_pred             cEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhh--chhHHhhccCcCCchhhhcCCCCCChHHHHHH
Q 015826          191 LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG--SERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA  268 (399)
Q Consensus       191 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~  268 (399)
                      .++.-.|.++++   ...+++.+.++.. +  .|+++.-|+-.-..  ...++. .|    .          ..-.|...
T Consensus       181 ~glgEvMn~~~V---~~~d~~~~~ki~~-~--~~~~idGH~p~l~g~~L~ay~a-aG----i----------~sDHE~~t  239 (588)
T PRK10027        181 TGLAEMMDYPGV---ISGQNALLDKLDA-F--RHLTLDGHCPGLGGKELNAYIA-AG----I----------ENCHESYQ  239 (588)
T ss_pred             eeEEeccCcccc---ccCCHHHHHHHHH-h--CCCceECCCCCCChHHHHHHHH-cC----C----------CCCcccCC
Confidence            788888877653   2356777777763 3  89999999753221  111111 11    1          11112233


Q ss_pred             HHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHH
Q 015826          269 IRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK  309 (399)
Q Consensus       269 v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak  309 (399)
                      ..++.+-.+        .|..+.+.+-|.. ..++.+..+.
T Consensus       240 ~eea~eklr--------~Gm~v~iRegS~~-~nl~~l~~~~  271 (588)
T PRK10027        240 LEEGRRKLQ--------LGMSLMIREGSAA-RNLNALAPLI  271 (588)
T ss_pred             HHHHHHHHH--------CCCEEEEeCCccc-cCHHHHHHHh
Confidence            444444444        3889999999887 7777777765

>TIGR01224 hutI imidazolonepropionase

Probab=99.72  E-value=4e-16  Score=151.70  Aligned_cols=51  Identities=27%  Similarity=0.489  Sum_probs=41.2

Q ss_pred             eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC
Q 015826           59 ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP  110 (399)
Q Consensus        59 ~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~  110 (399)
                      .+++|+|+||+|++|++....+. +.+.++||++|++|||||||+|+|+...
T Consensus         2 ~~~~v~i~~g~I~~vg~~~~~~~-~~~~~~iD~~g~~v~PGlin~H~H~~~~   52 (377)
T TIGR01224         2 EDAVILIHGGKIVWIGQLAALPG-EEATEIIDCGGGLVTPGLVDPHTHLVFA   52 (377)
T ss_pred             CceEEEEECCEEEEEechhhCCc-ccCCeEEeCCCCEEcccEEecccCcccc
Confidence            46899999999999997532221 1256799999999999999999999753

This enzyme catalyzes the third step in histidine degradation.

>cd00854 NagA N-acetylglucosamine-6-phosphate deacetylase, NagA, catalyzes the hydrolysis of the N-acetyl group of N-acetyl-glucosamine-6-phosphate (GlcNAc-6-P) to glucosamine 6-phosphate and acetate

Probab=99.72  E-value=1e-16  Score=155.20  Aligned_cols=184  Identities=20%  Similarity=0.258  Sum_probs=122.2

Q ss_pred             EEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC-CC--CcCchHHH
Q 015826           45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RT--EWEGFPSG  121 (399)
Q Consensus        45 ~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~~--~~e~~~~~  121 (399)
                      ++|+|++|+++....+++|.|+||||++|++....+   .+.++||++|++|+|||||+|+|..... +.  .++++...
T Consensus         1 ~~i~~~~v~~~~~~~~~~i~i~~g~I~~i~~~~~~~---~~~~vid~~g~~l~PG~iD~H~H~~~g~~~~~~~~e~~~~~   77 (374)
T cd00854           1 LIIKNARILTPGGLEDGAVLVEDGKIVAIGPEDELE---EADEIIDLKGQYLVPGFIDIHIHGGGGADFMDGTAEALKTI   77 (374)
T ss_pred             CEEEeEEEeCCCEEcccEEEEECCEEEEecCCCCcc---cCCcEEECCCCEecccEEEeeecccCCCCCCCCCHHHHHHH
Confidence            368999999984345789999999999998754322   2457999999999999999999997532 22  24677888


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc-CceeEEee--eeeeCC------C-----hhhHHHHHHHHH
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVGFW--GGLVPE------N-----AYNASALEALLN  187 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~------~-----~~~~~~l~~l~~  187 (399)
                      ++.++++||||++++. .+.+.....+.+..+.+..... +...++++  +.+...      +     ....++++++++
T Consensus        78 ~~~~~~~GvTtv~~t~-~t~~~~~~~~~l~~~~~~~~~~~g~~~~g~hleGP~~~~~~~g~h~~~~~~~~~~~~~~~~~~  156 (374)
T cd00854          78 AEALAKHGTTSFLPTT-VTAPPEEIAKALAAIAEAIAEGQGAEILGIHLEGPFISPEKKGAHPPEYLRAPDPEELKKWLE  156 (374)
T ss_pred             HHHHHccCcceeeccc-cCCCHHHHHHHHHHHHHHhhcCCCCeeEEEeeecCccCcccCCCCCHHHcCCcCHHHHHHHHH
Confidence            9999999999999987 3433333334444444433322 12223222  222111      0     113467888888


Q ss_pred             cCCcEEEEeecCCCCCCCCCCCHHHH--HHHHHHHHhcCCCEE-EecC-ChhhchhHHh
Q 015826          188 AGVLGLKSFMCPSGINDFPMTNASHI--KEGLSVLARYKRPLL-VHAE-MEKGSERHVK  242 (399)
Q Consensus       188 ~G~~~ik~~~~~~~~~~~~~~~~~~l--~~~~~~a~~~g~~v~-~H~~-~~~~~~~~~~  242 (399)
                      .+...+|++...          +|..  .+++++++++|+++. .|.. +...+.+.+.
T Consensus       157 ~~~~~ik~~tla----------PE~~~~~~~i~~~~~~gi~v~~GH~~a~~~~~~~a~~  205 (374)
T cd00854         157 AAGGLIKLVTLA----------PELDGALELIRYLVERGIIVSIGHSDATYEQAVAAFE  205 (374)
T ss_pred             hcCCCEEEEEEC----------CCCCChHHHHHHHHHCCeEEEeeCCcCCHHHHHHHHH
Confidence            777788886322          2333  678899999999995 9975 3344444443

This is the first committed step in the biosynthetic pathway to amino-sugar-nucleotides, which is needed for cell wall peptidoglycan and teichoic acid biosynthesis. Deacetylation of N-acetylglucosamine is also important in lipopolysaccharide synthesis and cell wall recycling.

>COG1228 HutI Imidazolonepropionase and related amidohydrolases [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=99.71  E-value=4.7e-17  Score=157.26  Aligned_cols=66  Identities=35%  Similarity=0.524  Sum_probs=53.2

Q ss_pred             ccEEEEccEEEcCCC-ceeeEEEEECCEEEEeccCC-CCCCCCCCCcEEeCCCCEEecceeecccccCCCC
Q 015826           43 NQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEE-DWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG  111 (399)
Q Consensus        43 ~~~li~n~~vv~~~~-~~~~~V~I~dG~I~~Ig~~~-~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~  111 (399)
                      ..+.+++++.++.-+ +.++.|+|+||||++|++.. ..+   ++.++||++|++|+|||||+|+|+...+
T Consensus        10 ~~~~~~~~~~~~~~~~i~~~~v~i~~GkI~~vg~~~~~~~---~~~~viD~~G~~V~PGLID~HtHl~~~~   77 (406)
T COG1228          10 AMLATLAGRGLPGLGIIEDGAVLIEDGKIVAVGPEEIDIP---AGAEVIDAKGKTVTPGLIDAHTHLGFGG   77 (406)
T ss_pred             hhheeeccccCCCcceeecceEEEECCEEEEecCcccCCC---CCCeEEeCCCCEEccceeeccccccccC
Confidence            356788888877444 45799999999999999873 322   4678999999999999999999997643

>COG1574 Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]

Probab=99.71  E-value=2.8e-16  Score=155.46  Aligned_cols=67  Identities=28%  Similarity=0.464  Sum_probs=55.7

Q ss_pred             CCccEEEEccEEEcCCCc--eeeEEEEECCEEEEeccCCCCCCC-CCCCcEEeCCCCEEecceeeccccc
Q 015826           41 PYNQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHL  107 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~~-~~~~~vID~~G~~vlPGlID~H~H~  107 (399)
                      ++.+++++||+|++++..  .-..|.|+||||++||...+.... .+..++||++|++|+|||||+|.|+
T Consensus         3 ~~adlil~nG~i~T~~~~~p~aeAvaI~dGrI~avG~~~~~~~~~~~~t~viDL~Gk~v~PGfvDaH~Hl   72 (535)
T COG1574           3 MAADLILHNGRIYTMDEARPTAEAVAIKDGRIVAVGSDAELKALAGPATEVIDLKGKFVLPGFVDAHLHL   72 (535)
T ss_pred             cccceeEECCEEEeccCCCcceeEEEEcCCEEEEEcChHHHHhhcCCCceEEeCCCCEeccccchhhHHH
Confidence            356899999999998863  457999999999999987543221 1467899999999999999999998

>KOG2902 consensus Dihydroorotase [Nucleotide transport and metabolism]

Probab=99.70  E-value=7.2e-16  Score=132.44  Aligned_cols=245  Identities=18%  Similarity=0.227  Sum_probs=167.0

Q ss_pred             EecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh-ccCceeEEeeeeeeCC
Q 015826           96 IMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE-KRIYVDVGFWGGLVPE  174 (399)
Q Consensus        96 vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~  174 (399)
                      -+|+.-|+|+|+++..+-     ..-.-....+||.....|| |..|++.+.+..-.+..... -.+...+  .+.+--.
T Consensus         6 ~i~~~~DmHvHlR~g~ml-----~aVvP~~a~ggvs~AyvMP-NL~PPiTt~da~i~YkK~i~kL~skttf--LMslYLs   77 (344)
T KOG2902|consen    6 TITQPDDMHVHLRDGDML-----HAVVPHSASGGVSRAYVMP-NLKPPITTTDAAIIYKKFIMKLPSKTTF--LMSLYLS   77 (344)
T ss_pred             ecCCccceeEEeccCCee-----eeeccccccCceeEEEEcC-CCCCCcchHHHHHHHHHHHHhcCcccee--EEEEeec
Confidence            478899999999875321     0111223478899999999 77787766554433333222 1111122  1111111


Q ss_pred             ChhhHHHHHHHHHc-CCcEEEEeecCCCCCCCCCC--CHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCch
Q 015826          175 NAYNASALEALLNA-GVLGLKSFMCPSGINDFPMT--NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR  251 (399)
Q Consensus       175 ~~~~~~~l~~l~~~-G~~~ik~~~~~~~~~~~~~~--~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~  251 (399)
                      .....+++++..+. ++.++|.|......+.....  .-+.+..++++.++.|+++.+|-|-+......+.         
T Consensus        78 ~~ttPe~I~eAa~~~~irgVK~YPaGaTTNS~~GV~~~f~~fyPvf~aMqe~nm~LnvHGEvpps~D~~Vf---------  148 (344)
T KOG2902|consen   78 DKTTPEEIREAAESGVIRGVKLYPAGATTNSQDGVTDLFGKFYPVFEAMQEQNMPLNVHGEVPPSIDGHVF---------  148 (344)
T ss_pred             CCCCHHHHHHHHHhCceeeEEeccCcccccccccccccchhhhHHHHHHHHcCceEEecCCCCCccCCcee---------
Confidence            22245678887776 56689987543211111111  1356778899999999999999876554321111         


Q ss_pred             hhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccC
Q 015826          252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI  331 (399)
Q Consensus       252 ~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~  331 (399)
                                 .+|..-+..++.+-.+      +++.++...|+++. ++++.++.++  +..|-+.+++|||+++.++.
T Consensus       149 -----------~aE~~Flptll~Lhqr------fP~LKivlEHcTt~-dAv~~ve~a~--~~sVaaTvTahHL~Lt~~dw  208 (344)
T KOG2902|consen  149 -----------DAEKIFLPTLLQLHQR------FPQLKIVLEHCTTM-DAVNFVESAK--EGSVAATVTAHHLLLTRNDW  208 (344)
T ss_pred             -----------cchhhhHHHHHHHHHh------CccceeHHHhcccH-HHHHHHHhhc--CCceeeEeehheeEEehhhh
Confidence                       1344455666666555      46889999999998 8999998865  45789999999999999885


Q ss_pred             CCCCcceEEcCCCCChhhHHHHHHHHhcCCcc-EEeCCCCCCCccccc
Q 015826          332 PDGDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKL  378 (399)
Q Consensus       332 ~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id-~i~sdh~p~~~~~k~  378 (399)
                       ++++...|.|-.+.+.||++|.+|.-+|..- ++|||.+||....|+
T Consensus       209 -qg~P~nfCkPVaK~e~dr~AlvkAatSg~pkFFfGsDSAPHprs~K~  255 (344)
T KOG2902|consen  209 -QGQPHNFCKPVAKREIDREALVKAATSGSPKFFFGSDSAPHPRSRKE  255 (344)
T ss_pred             -cCCCcccccccccCcccHHHHHHHHhcCCCceeecCCCCCCcccccc
Confidence             3466778999999999999999999999888 789999999988885

>TIGR00221 nagA N-acetylglucosamine-6-phosphate deacetylase

Probab=99.68  E-value=9.8e-16  Score=147.43  Aligned_cols=188  Identities=18%  Similarity=0.195  Sum_probs=119.8

Q ss_pred             ccEEEEccEEEcCCCce-eeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC---CCcCch
Q 015826           43 NQYWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR---TEWEGF  118 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~-~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~---~~~e~~  118 (399)
                      ++++|+|++|+++++.. +++|.|+||||++|++..+.+   +..++||++|++|+|||||+|+|......   .+.+++
T Consensus         3 ~~~~i~n~~i~~~~~~~~~~~i~V~dGkI~~I~~~~~~~---~~~~viD~~G~~i~PGfID~HvHg~~g~~~~~~~~e~~   79 (380)
T TIGR00221         3 ESYLLKDIAIVTGNEVIDNGAVGINDGKISTVSTEAELE---PEIKEIDLPGNVLTPGFIDIHIHGCGGVDTNDASFETL   79 (380)
T ss_pred             ceEEEEeeEEECCCCEEeccEEEEECCEEEEEcccccCC---CCCeEEECCCCEEccceeeeeeccccCcCCCCCCHHHH
Confidence            46899999999987765 689999999999998653322   24579999999999999999999864311   233678


Q ss_pred             HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHH-hccCceeEEeeee--eeCC------Ch-----hhHHHHHH
Q 015826          119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA-EKRIYVDVGFWGG--LVPE------NA-----YNASALEA  184 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~------~~-----~~~~~l~~  184 (399)
                      ...++.++++|||+++.+. .+.+.....+.++...+.. ...+...+++|..  +...      ++     -..+++++
T Consensus        80 ~~~~~~~~~~GvTt~l~t~-~t~~~~~~~~~l~~~~~~~~~~~~a~~lG~HlEGPfi~~~~~Gah~~~~i~~p~~~~~~~  158 (380)
T TIGR00221        80 EIMSERLPKSGCTSFLPTL-ITQPDENIKQAVKNMREYLAKEKNAQALGLHLEGPFLSPEKKGAHPPEYIREPDVELFKK  158 (380)
T ss_pred             HHHHHHHHhcCeeEEeeec-cCCCHHHHHHHHHHHHHHHhccCCceeeeEeeecCcCChhhcCCCCHHHhhCcCHHHHHH
Confidence            8889999999999999887 3444333334444443332 1223445665542  2111      11     13567778


Q ss_pred             HHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEE-Eec-CChhhchhHHh
Q 015826          185 LLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLL-VHA-EMEKGSERHVK  242 (399)
Q Consensus       185 l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~-~H~-~~~~~~~~~~~  242 (399)
                      +.+.....+|.....+      -.+  .-.++++.+.++|+.|. -|. .+.+.+...+.
T Consensus       159 ~~~~~~~~i~~vTlAP------E~~--~~~~~i~~l~~~gi~vs~GHs~A~~~~~~~a~~  210 (380)
T TIGR00221       159 FLCEAGGVITKVTLAP------EED--QHFELIRHLKDAGIIVSAGHTNATYELAKAAFK  210 (380)
T ss_pred             HHHhcCCCEEEEEECC------CCC--ChHHHHHHHHHCCeEEEeeCCCCCHHHHHHHHH
Confidence            8764333455543221      111  12355667788898886 575 44455544444

>cd01313 Met_dep_hydrolase_E Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=99.68  E-value=1.7e-15  Score=148.80  Aligned_cols=165  Identities=18%  Similarity=0.239  Sum_probs=93.2

Q ss_pred             cCCCc-eeeEE-EEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC---CCCC-----------c--
Q 015826           54 TPKGV-ISGAV-EIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRTE-----------W--  115 (399)
Q Consensus        54 ~~~~~-~~~~V-~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~~~-----------~--  115 (399)
                      ++++. .+++| +|+||+|++||+...       .++||++|++|||||||+|+|+.+.   +...           |  
T Consensus         3 ~~~~~~~~~~i~~v~~g~I~~Vg~~~~-------~~~iD~~g~lv~PGfVn~H~Hl~~~~~rg~~~~~~~~~~~l~~w~~   75 (418)
T cd01313           3 LPEGWERNVRIEVDADGRIAAVNPDTA-------TEAVALLGGALLPGMPNLHSHAFQRAMAGLTEYRGSAADSFWTWRE   75 (418)
T ss_pred             CCCceecCeEEEEeCCCeEEEecCCCC-------CcccccCCCeeccCccccCccHHHHHhcccccccCCCCCChhhHHH
Confidence            44554 36899 999999999997531       2469999999999999999999753   1100           0  


Q ss_pred             -----------Cch----HHHHHHHHcCCeeeeecCcCCCCCCC------CcHHHHHHHHHHHhc---cCceeEEee--e
Q 015826          116 -----------EGF----PSGTKAAAAGGITTLIDMPLNSDPST------ISTETLKLKVDAAEK---RIYVDVGFW--G  169 (399)
Q Consensus       116 -----------e~~----~~~~~~al~~GvTtv~d~~~~~~~~~------~~~~~~~~~~~~~~~---~~~~~~~~~--~  169 (399)
                                 +++    .....+++++||||++|+.. ..+..      ......+...+.+..   +..+....+  .
T Consensus        76 ~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~~-~~~~~~~~~~~~~~~~~~a~~~a~~~~GiR~~~~~~~~~~~  154 (418)
T cd01313          76 LMYRFAARLTPEQIEAIARQLYIEMLLAGITAVGEFHY-VHHDPDGTPYADPAELAQRVIAAASDAGIGITLLPVLYARA  154 (418)
T ss_pred             HHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEEeee-eccCCCCCccCChhhhHHHHHHHHHHhCCeEEeeeeEEecc
Confidence                       111    12345678999999999752 11100      011111222222221   211111111  0


Q ss_pred             eeeCCC------------hhhHHHHHHHH----HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015826          170 GLVPEN------------AYNASALEALL----NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE  232 (399)
Q Consensus       170 ~~~~~~------------~~~~~~l~~l~----~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~  232 (399)
                      +.....            .+..+.+++++    +.+  .+...++++.   ...++++.++++++.|++ |+++++|+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~---~~~~s~e~l~~~~~~a~~-g~~i~~H~~  227 (418)
T cd01313         155 GFGGPAPNPGQRRFINGYEDFLGLLEKALRAVKEHA--AARIGVAPHS---LRAVPAEQLAALAALASE-KAPVHIHLA  227 (418)
T ss_pred             CCCCCCCchhhhhhcccHHHHHHHHHHHhhhhccCC--ceEEEEccCC---CCCCCHHHHHHHHHHHhc-CCceEEEeC
Confidence            110000            01122233322    123  2444444432   125799999999999999 999999983

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.

>COG1001 AdeC Adenine deaminase [Nucleotide transport and metabolism]

Probab=99.66  E-value=5.3e-15  Score=143.84  Aligned_cols=245  Identities=22%  Similarity=0.302  Sum_probs=155.2

Q ss_pred             CCCccEEEEccEEEcCCC--ceeeEEEEECCEEEE-eccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcC
Q 015826           40 LPYNQYWLTSKRIVTPKG--VISGAVEIKEGNIIS-IVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWE  116 (399)
Q Consensus        40 ~~~~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~-Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e  116 (399)
                      +...+++++||+++|.-.  +..++|.|.+|+|+. +++..     .++.++||+.|+++.|||||.|+|+......   
T Consensus        21 ~~~adlv~~ng~ivdv~~gei~~~dIaI~~grI~~v~~~~~-----~e~~~~iDa~g~yivPGfID~H~HIESSm~t---   92 (584)
T COG1001          21 RAKADLVLKNGRIVDVVTGEIYKGDIAIAGGRIVGVIGEYR-----AEATEVIDAAGRYIVPGFIDAHLHIESSMLT---   92 (584)
T ss_pred             CCCCCEEEECCEEEEeeeccEEeeeEEEECCEEEEeecCcC-----cccceeecCCCCEeccceeecceeccccccC---
Confidence            345699999999998644  568999999999999 55443     1467899999999999999999998765433   


Q ss_pred             chHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeee-eCCC-------hhhHHHHHHHHH-
Q 015826          117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL-VPEN-------AYNASALEALLN-  187 (399)
Q Consensus       117 ~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~l~~l~~-  187 (399)
                       -...++..+..||||++.-|- .--.....+.++..++.++. ..+++.++... ++..       .-..+.++++++ 
T Consensus        93 -P~~FA~~Vlp~GtTtvV~DPH-EIaNV~G~~Gi~~ml~~a~~-~pl~~~~~~pScVPat~~Et~Ga~l~a~~i~e~~~~  169 (584)
T COG1001          93 -PSEFARAVLPHGTTTVVSDPH-EIANVLGEDGIRFMLDEAKE-TPLKVYVMLPSCVPATPFETSGAELTAEDIKELLEH  169 (584)
T ss_pred             -HHHHHHHhhccCceEEeeCcH-HHHhhccHHHHHHHHHHHhh-CCeEEEEecccCccCCccccCCceecHHHHHHHhhC
Confidence             235578889999999986541 10011234555666666553 34565544321 1111       113567788776 


Q ss_pred             cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch-hHHhhccCcCCchhhhcCCCCCChHHHH
Q 015826          188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE-RHVKLEDDTLDTRSYSTYLKTRPPSWEE  266 (399)
Q Consensus       188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~E~  266 (399)
                      ..+.++.-.|.++++    ...++.+...++.+++.|+++.-|+....... ......|              ...-.|.
T Consensus       170 p~Vigl~E~Mn~pgV----i~~D~~~l~kl~a~~~~~k~VdGHapgl~g~~Ln~Y~aaG--------------i~tDHE~  231 (584)
T COG1001         170 PEVIGLGEMMNFPGV----IEGDPDMLAKLEAARKAGKPVDGHAPGLSGKELNAYIAAG--------------ISTDHES  231 (584)
T ss_pred             CCccchhhhcCCchh----ccCCHHHHHHHHHHHHcCCeecccCCCCChHHHHHHHhcC--------------CCcCccc
Confidence            456677777776653    34566777888999999999999986543211 1111111              1111122


Q ss_pred             HHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHH-HHCCCCEEEEcccccccccccc
Q 015826          267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEA-KTNGDSITVETCPHYLAFSAEE  330 (399)
Q Consensus       267 ~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~a-k~~G~~vt~e~~p~~L~~~~~~  330 (399)
                      ....++++-.+        .|..+.+.+.|.. ..++.+-.+ .+.|.        ++++|++++
T Consensus       232 ~t~EEa~~klr--------~Gm~i~iReGS~a-~dl~~l~~~i~e~~~--------~~~~lcTDD  279 (584)
T COG1001         232 TTAEEALEKLR--------LGMKIMIREGSAA-KDLAALLPAITELGS--------RRVMLCTDD  279 (584)
T ss_pred             CCHHHHHHHHh--------CCcEEEEEcCchh-hhHHHHHHHHhhcCC--------ceEEEECCC
Confidence            23344444343        3888999999887 666655554 34443        355666554

>cd01312 Met_dep_hydrolase_D Metallo-dependent hydrolases, subgroup D is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=99.66  E-value=4.8e-15  Score=143.59  Aligned_cols=158  Identities=16%  Similarity=0.231  Sum_probs=90.3

Q ss_pred             CEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC---------Cc-------------Cch----HHH
Q 015826           68 GNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---------EW-------------EGF----PSG  121 (399)
Q Consensus        68 G~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~---------~~-------------e~~----~~~  121 (399)
                      |+|++||+..+.....++.+++|+.|++|||||||+|+|+.+..+.         .|             ++.    ..+
T Consensus         1 ~~I~aVG~~~~~~~~~~~~~v~d~~g~~v~PGlVnaH~H~~~~~~rg~~~~~~~~~wl~~~~~~~~~~~~e~~~~~a~~~   80 (381)
T cd01312           1 DKILEVGDYEKLEKRYPGAKHEFFPNGVLLPGLINAHTHLEFSANVAQFTYGRFRAWLLSVINSRDELLKQPWEEAIRQG   80 (381)
T ss_pred             CeEEEECChHHHHhhcCCCeEEecCCcEEecCccccccccchhccccccCCCchHHHHHHHHHHHHhcChHHHHHHHHHH
Confidence            6899999854322222456899999999999999999999654221         00             111    233


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCC-hhhH-HHHHHHHH---cCCcEEEEe
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNA-SALEALLN---AGVLGLKSF  196 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~l~~l~~---~G~~~ik~~  196 (399)
                      ..+++++||||+.|+.. .      .+.++...+ ..-+..+.+.... ..+.. .+.. +.++...+   ..-..++..
T Consensus        81 ~~E~l~~G~Tt~~d~~~-~------~~~~~a~~~-~GiR~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  151 (381)
T cd01312          81 IRQMLESGTTSIGAISS-D------GSLLPALAS-SGLRGVFFNEVIG-SNPSAIDFKGETFLERFKRSKSFESQLFIPA  151 (381)
T ss_pred             HHHHHHhCCeEEEEecC-C------HHHHHHHHH-cCCcEEEEEeeEC-CCCchhhhhHHHHHHHHHHhhccCccceEEE
Confidence            45678999999999862 1      122222211 1112222222111 11111 0111 11222211   122235555


Q ss_pred             ecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhc
Q 015826          197 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGS  237 (399)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~  237 (399)
                      ++++.   ...++++.++++.+.|+++|+++++|+ |+..+.
T Consensus       152 ~~p~a---~~~~s~e~l~~~~~lA~~~g~~i~~Hl~E~~~e~  190 (381)
T cd01312         152 ISPHA---PYSVHPELAQDLIDLAKKLNLPLSTHFLESKEER  190 (381)
T ss_pred             ECCCC---CcccCHHHHHHHHHHHHHcCCeEEEEecCcHHHH
Confidence            55542   236789999999999999999999996 555543

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.

>PF13594 Amidohydro_5: Amidohydrolase; PDB: 4F0R_A 4F0S_A 1NFG_C 2FVM_A 2FVK_A 2FTY_D 1YBQ_B 1POJ_B 1ONW_A 2AQO_B

Probab=99.65  E-value=3.6e-16  Score=112.74  Aligned_cols=68  Identities=35%  Similarity=0.667  Sum_probs=49.0

Q ss_pred             EEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeee
Q 015826           63 VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTL  133 (399)
Q Consensus        63 V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv  133 (399)
                      |+|+||||++|++....+  .++.++||++|++|+|||||+|+|+..+.... .+.......++++|||||
T Consensus         1 V~I~~g~I~~v~~~~~~~--~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~-~~~~~~~~~~l~~GvTTV   68 (68)
T PF13594_consen    1 VLIEDGKIVAVGPDSELP--ADAAEVIDAKGKYVMPGFIDMHTHLGEPGWQS-LDPETEAAAALAGGVTTV   68 (68)
T ss_dssp             EEEETTEEEEEESSCCTT--STCCEEEEETTCEEEE-EEEEEE-TTTTCEGG-CTCHHHHHHHHHTTEEEE
T ss_pred             CEEECCEEEEeCCCCCCC--CCCCEEEECCCCEEeCCeEeeeeccccccccc-cchhhHHHHHHCcceeeC
Confidence            789999999996544333  13567899999999999999999987432211 112456777889999997

...

>PRK09229 N-formimino-L-glutamate deiminase; Validated

Probab=99.65  E-value=3.9e-15  Score=148.04  Aligned_cols=179  Identities=16%  Similarity=0.193  Sum_probs=97.8

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEEC-CEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC---CC-----
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKE-GNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GR-----  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~d-G~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~-----  112 (399)
                      |..++++++.+.++ -..+++|+|+| |+|++||+....    +   .++.+|++|||||||+|+|+.+.   +.     
T Consensus         2 ~~~~~~~~~~~~~~-~~~~~~v~i~~~grI~~vg~~~~~----~---~~~~~g~~vlPGlVn~H~H~~~~~~rg~~~~~~   73 (456)
T PRK09229          2 MTTLFAERALLPDG-WARNVRLTVDADGRIAAVEPGAAP----A---GAERLAGPVLPGMPNLHSHAFQRAMAGLTEVRG   73 (456)
T ss_pred             chhHHHHHhhCCCc-cccCcEEEEecCCeEEEecCCCCC----c---cccccCcEEccCcccccccHhhHhhcCcccccC
Confidence            34556666666333 23578999999 999999985321    1   24568999999999999998633   10     


Q ss_pred             ------CCc-------------Cch----HHHHHHHHcCCeeeeecCcCCC-CC----CCCcHHHHHHHHHHHhccC-ce
Q 015826          113 ------TEW-------------EGF----PSGTKAAAAGGITTLIDMPLNS-DP----STISTETLKLKVDAAEKRI-YV  163 (399)
Q Consensus       113 ------~~~-------------e~~----~~~~~~al~~GvTtv~d~~~~~-~~----~~~~~~~~~~~~~~~~~~~-~~  163 (399)
                            ..|             +++    ...+.+++++||||+.|+.+.. .+    .....+......+.....+ ..
T Consensus        74 ~~~~~l~~w~~~~~~~~~~~~~e~~~~~a~~~~~e~L~~G~Ttv~d~~~~~~~~~~~~~~~~~~~~~a~~~a~~e~GiR~  153 (456)
T PRK09229         74 PPQDSFWSWRELMYRFALRLTPDQLEAIARQLYVEMLEAGYTSVGEFHYLHHDPDGTPYADPAEMALRIVAAARAAGIGL  153 (456)
T ss_pred             CCCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCCcEEEeeeeeccCCCCCccCChHHHHHHHHHHHHHcCCEE
Confidence                  001             111    1234567899999999975210 00    1111222233333332211 11


Q ss_pred             eEE--eee--ee---eCC--------C-hhhHHHHHHHHH--cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 015826          164 DVG--FWG--GL---VPE--------N-AYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR  225 (399)
Q Consensus       164 ~~~--~~~--~~---~~~--------~-~~~~~~l~~l~~--~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~  225 (399)
                      .++  .+.  +.   .+.        . ....+..+++.+  .+-..+...++++.   ...++++.++++++.| ++|+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~s~e~l~~~~~~A-~~g~  229 (456)
T PRK09229        154 TLLPVLYAHSGFGGQPPNPGQRRFINDPDGFLRLLEALRRALAALPGARLGLAPHS---LRAVTPDQLAAVLALA-APDG  229 (456)
T ss_pred             EeceeeeecCCCCCCCCchhhcccccCHHHHHHHHHHHHHhhcCCCceEEEEeCCC---CCCCCHHHHHHHHHHh-cCCC
Confidence            111  110  00   000        0 011222223322  11123444445432   2367999999999999 9999


Q ss_pred             CEEEecC
Q 015826          226 PLLVHAE  232 (399)
Q Consensus       226 ~v~~H~~  232 (399)
                      ++++|+.
T Consensus       230 ~i~~H~~  236 (456)
T PRK09229        230 PVHIHIA  236 (456)
T ss_pred             ceEEEeC
Confidence            9999983

>cd01300 YtcJ_like YtcJ_like metal dependent amidohydrolases

Probab=99.64  E-value=1.3e-14  Score=145.46  Aligned_cols=122  Identities=19%  Similarity=0.171  Sum_probs=75.8

Q ss_pred             CCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCC
Q 015826          206 PMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA  285 (399)
Q Consensus       206 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~  285 (399)
                      +.+++++++++++.|+++|+++++|+.....+..                            .+..+.....+.    ..
T Consensus       290 ~~~~~e~l~~~~~~a~~~g~~v~~Ha~gd~~i~~----------------------------~l~~~~~~~~~~----g~  337 (479)
T cd01300         290 LLISPEELEELVRAADEAGLQVAIHAIGDRAVDT----------------------------VLDALEAALKDN----PR  337 (479)
T ss_pred             ccCCHHHHHHHHHHHHHCCCCEEEEEecHHHHHH----------------------------HHHHHHHHHHhc----CC
Confidence            4568999999999999999999999976432211                            111111111211    11


Q ss_pred             CCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC--CC-cceEEcCCCCChhhHHHHHHHHhcCCc
Q 015826          286 EGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD--GD-TRFKCAPPIRDAANKEKLWEALMDGHI  362 (399)
Q Consensus       286 ~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~--~~-~~~~~~Pplr~~~~~~~l~~~l~~G~i  362 (399)
                      .+.+..+.|++..  +-+.++++++.|  +.+++||+++.+..+....  .+ ...+..+|         +.+.++.|..
T Consensus       338 ~~~r~~i~H~~~~--~~~~~~~l~~~g--v~~~~~P~~~~~~~~~~~~~~lg~~~~~~~~p---------~~~~~~~Gv~  404 (479)
T cd01300         338 ADHRHRIEHAQLV--SPDDIPRFAKLG--VIASVQPNHLYSDGDAAEDRRLGEERAKRSYP---------FRSLLDAGVP  404 (479)
T ss_pred             CCCCceeeecccC--CHHHHHHHHHcC--CceEeCcccccCchHHHHHhcccHHHHhcCch---------HHHHHHCCCe
Confidence            2567889998764  245666777777  5567899877654332111  01 12223333         4567788999


Q ss_pred             cEEeCCCCCC
Q 015826          363 DMLSSDHSPT  372 (399)
Q Consensus       363 d~i~sdh~p~  372 (399)
                      .+++||+.+.
T Consensus       405 v~lGSD~~~~  414 (479)
T cd01300         405 VALGSDAPVA  414 (479)
T ss_pred             eeccCCCCCC
Confidence            9999999543

YtcJ is a Bacillus subtilis ORF of unknown function. The Arabidopsis homolog LAF3 has been identified as a factor required for photochrome A signalling.

>TIGR02022 hutF formiminoglutamate deiminase

Probab=99.62  E-value=2.9e-14  Score=141.51  Aligned_cols=84  Identities=19%  Similarity=0.366  Sum_probs=56.6

Q ss_pred             EEEccEEEcCCCc-eeeEEEEE-CCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC---CCC-------
Q 015826           46 WLTSKRIVTPKGV-ISGAVEIK-EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRT-------  113 (399)
Q Consensus        46 li~n~~vv~~~~~-~~~~V~I~-dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~~-------  113 (399)
                      .++|+++  +++. .+++|+|+ ||+|++||+.....   +.   .+..|++|||||||+|+|+.+.   +..       
T Consensus         5 ~~~~~~~--~~~~~~~~~i~I~~~g~I~~vg~~~~~~---~~---~~~~g~lvlPGfVn~H~H~~~~~~rg~~~~~~~~~   76 (455)
T TIGR02022         5 WAERALL--PDGWAEGVRIAVAADGRILAIETGVPAA---PG---AERLSGPLLPGLANLHSHAFQRAMAGLAEVAGSGG   76 (455)
T ss_pred             hHHhccC--CCccccCceEEEecCCEEEEecCCCCcc---cc---cccCCCEEccCCcccCcchhhHhhcCCcccccCCC
Confidence            3566665  3443 46899999 99999999854321   12   2346899999999999999653   110       


Q ss_pred             ----Cc-------------CchH----HHHHHHHcCCeeeeecCc
Q 015826          114 ----EW-------------EGFP----SGTKAAAAGGITTLIDMP  137 (399)
Q Consensus       114 ----~~-------------e~~~----~~~~~al~~GvTtv~d~~  137 (399)
                          .|             ++++    ....+++++||||++|+.
T Consensus        77 ~~l~~w~~~~~~~~~~~t~e~~~~~a~~~~~e~l~~G~Ttv~d~~  121 (455)
T TIGR02022        77 DSFWTWRELMYRFVDRLTPEQLQAIARQLYVEMLEAGFTRVGEFH  121 (455)
T ss_pred             CCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhCCCEEEeee
Confidence                01             1221    234567899999999975

In some species, histidine utilization goes via urocanate to glutamate in four step, the last being removal of formamide. This model describes an alternate fourth step, formiminoglutamate hydrolase, which leads to N-formyl-L-glutamate. This product may be acted on by formylglutamate amidohydrolase (TIGR02017) and bypass glutamate as a product during its degradation. Alternatively, removal of formate (by EC 3.5.1.68) would yield glutamate.

>PRK11170 nagA N-acetylglucosamine-6-phosphate deacetylase; Provisional

Probab=99.62  E-value=1.4e-14  Score=139.79  Aligned_cols=184  Identities=17%  Similarity=0.175  Sum_probs=113.8

Q ss_pred             EEEEccEEEcCCCce-eeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC-------CCcC
Q 015826           45 YWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR-------TEWE  116 (399)
Q Consensus        45 ~li~n~~vv~~~~~~-~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-------~~~e  116 (399)
                      ++|+|++|+++++.. +++|.|+||||++|++....+   .+.++||++|++|+|||||+|+|......       .+.+
T Consensus         2 ~~i~n~~i~~~~~~~~~~~v~IedgkI~~I~~~~~~~---~~~~~ID~~G~~l~PG~ID~HvHG~~g~~~~~~~~~~~~~   78 (382)
T PRK11170          2 YALTNGRIYTGHEVLDDHAVVIADGLIEAVCPVAELP---PGIEQRDLNGAILSPGFIDLQLNGCGGVQFNDTAEAISVE   78 (382)
T ss_pred             EEEEeeEEECCCCeEeCCEEEEECCEEEEecCCccCC---CCCeEEeCCCCEEccceeeeeecCccCcccccCccCCCHH
Confidence            679999999998765 579999999999998753322   24479999999999999999999753211       1335


Q ss_pred             chHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeee--eeCC------Chh-----hHHHHH
Q 015826          117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG--LVPE------NAY-----NASALE  183 (399)
Q Consensus       117 ~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~------~~~-----~~~~l~  183 (399)
                      +++..++.++++|||+++... .+.+.....+.++...+.....+...+++|..  +...      +++     ..++++
T Consensus        79 ~l~~~~~~~~~~GvTt~lpT~-it~~~~~~~~~l~~~~~~~~~~~a~~~G~HlEGPfi~~~~~Gah~~~~~~~p~~~~~~  157 (382)
T PRK11170         79 TLEIMQKANEKSGCTSFLPTL-ITSSDELMKQAVRVMREYLAKHPNQALGLHLEGPYLNLVKKGTHNPEFIRKPDAEMVD  157 (382)
T ss_pred             HHHHHHHHHHhcCEeEEeeec-cCCCHHHHHHHHHHHHHHHhcCCCeEEEEEeecCCCCcccCCCCCHHHhcCcCHHHHH
Confidence            566777788999999999876 33332222333333333222334456665542  1111      011     245677


Q ss_pred             HHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEE-ec-CChhhchhHHh
Q 015826          184 ALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV-HA-EMEKGSERHVK  242 (399)
Q Consensus       184 ~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~-H~-~~~~~~~~~~~  242 (399)
                      .+.+.. ..+|.....+      -..  .. ++++.+++.|+.+.+ |. .+.+.+...+.
T Consensus       158 ~~~~~~-~~i~~iTlAP------E~~--~~-~~i~~l~~~gi~vs~GHs~A~~~~~~~a~~  208 (382)
T PRK11170        158 FLCENA-DVITKVTLAP------EMV--DA-EVIRKLVEAGIVVSAGHSNATYEEAKAGFR  208 (382)
T ss_pred             HHHhcc-CCEEEEEECC------CCC--cH-HHHHHHHHCCcEEEeeCCcCCHHHHHHHHH
Confidence            776653 3466543221      111  12 567778888988874 65 34444444443

>COG0804 UreC Urea amidohydrolase (urease) alpha subunit [Amino acid transport and metabolism]

Probab=99.60  E-value=7.6e-14  Score=128.38  Aligned_cols=172  Identities=24%  Similarity=0.324  Sum_probs=132.0

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCC-------CCCCcEEeCCCCEEecceeecccccCCCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRN-------SKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE  114 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~-------~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~  114 (399)
                      ..|++|.|+.|+|-.++..+||.|+||||++||+...+...       .+..++|-++|++|.-|-||+|+|+-.|    
T Consensus        66 ~~D~VITNa~IiD~~Gi~KADiGikdGrI~~IGKaGNPd~~dgV~iiiG~sTe~iagEg~I~TAGGiDtHiHfI~P----  141 (568)
T COG0804          66 ALDLVITNALIIDYWGIVKADIGIKDGRIAGIGKAGNPDIMDGVTIIIGPSTEIIAGEGKIVTAGGIDTHIHFICP----  141 (568)
T ss_pred             cccEEEeeeEEEeccceEEeecccccceEEEeecCCCCCccCCceEEeccccceecCCceEEeeccccceeEEecH----
Confidence            46899999999999999999999999999999976432211       1356789999999999999999998754    


Q ss_pred             cCchHHHHHHHHcCCeeeeecCcCCCCCCC--------CcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHH
Q 015826          115 WEGFPSGTKAAAAGGITTLIDMPLNSDPST--------ISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL  186 (399)
Q Consensus       115 ~e~~~~~~~~al~~GvTtv~d~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  186 (399)
                           .....||.+|+||++....  -|..        ..+-.+.+.++.+.. ..+|+++.+-   ++......+.+++
T Consensus       142 -----qqi~~Al~sGiTtmiGGGt--Gpa~Gt~aTT~TpG~w~i~rMl~a~d~-~p~N~g~lgK---Gn~s~~~~L~Eqi  210 (568)
T COG0804         142 -----QQIEEALASGITTMIGGGT--GPADGTNATTCTPGPWHIARMLQAADG-LPMNIGFLGK---GNASNPAPLAEQI  210 (568)
T ss_pred             -----HHHHHHHhcCcEEEecCcc--CCCCCcccccccCCHHHHHHHHHhhhc-CceeeEEeec---CCCCCchhHHHHH
Confidence                 3567899999999987641  1211        123456666666653 4578887653   3444456789999


Q ss_pred             HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      ++|+.++|+.-.       .-.++..+..++..|.++++.|.+|...-.
T Consensus       211 ~aGa~GlKlHED-------WG~TpaaI~~~L~VAD~~DvqVaiHtDTLN  252 (568)
T COG0804         211 EAGAIGLKLHED-------WGATPAAIDTCLSVADEYDVQVAIHTDTLN  252 (568)
T ss_pred             hhccceeEeecc-------cCCCHHHHHHHHhhhhhhceEEEEeecccc
Confidence            999999998632       246889999999999999999999987643

>COG3454 Metal-dependent hydrolase involved in phosphonate metabolism [Inorganic ion transport and metabolism]

Probab=99.57  E-value=2.9e-13  Score=121.69  Aligned_cols=149  Identities=24%  Similarity=0.292  Sum_probs=96.3

Q ss_pred             EEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC-----CCcC---c
Q 015826           46 WLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR-----TEWE---G  117 (399)
Q Consensus        46 li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-----~~~e---~  117 (399)
                      ++.|++|+..+.+.++.|.|+||+|..|.+....     -...+|++|.+++|||||+|+-.-+..+     -.|.   .
T Consensus         2 ~lsnarivl~D~v~~gsv~i~DG~Ia~i~~g~s~-----~~~~~d~eGd~LLPGlIeLHtD~lE~~~~PRPgV~wp~~aA   76 (377)
T COG3454           2 ILSNARIVLEDRVVNGSVLIRDGLIADIDEGISP-----LAAGIDGEGDYLLPGLIELHTDNLERFMTPRPGVRWPPIAA   76 (377)
T ss_pred             ccccceEEeecceeeeeEEEecceEeeeccccCc-----ccccccCCCCeecccchhhcchhhhcccCCCCCCCCCchHH
Confidence            5789999999998899999999999999876532     1357999999999999999995432211     1122   2


Q ss_pred             hHHHHHHHHcCCeeeeecCcC--CCCCCCCcHHHHHHHHHHH-----hccCceeEEeeeeeeCCChhhHHHHHHHHHcCC
Q 015826          118 FPSGTKAAAAGGITTLIDMPL--NSDPSTISTETLKLKVDAA-----EKRIYVDVGFWGGLVPENAYNASALEALLNAGV  190 (399)
Q Consensus       118 ~~~~~~~al~~GvTtv~d~~~--~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~  190 (399)
                      +...-+..+.+|+|||+|.-.  .........+.+.+.++..     ++....|-.++....-.....++.++++...+.
T Consensus        77 i~ahD~~l~~sGITTv~dal~iGd~~~gg~r~~~~~~midaI~~~~~~g~lradHr~HlRcEvs~~~~l~~~e~~~~~p~  156 (377)
T COG3454          77 ILAHDAQLAASGITTVLDALAIGDVRDGGLRLENLRKMIDAIEEAQAAGRLRADHRLHLRCEVSHPATLPLFEDLMDHPR  156 (377)
T ss_pred             HHHhhHHHHhcChhhHHhhhhcCcccCCccchHHHHHHHHHHHHHHhccchhhccceeeeeecCChhHHHHHHHHhcCCC
Confidence            334456778999999998641  1111122233444444333     223334544554443344556788888888776


Q ss_pred             cEEEEeecC
Q 015826          191 LGLKSFMCP  199 (399)
Q Consensus       191 ~~ik~~~~~  199 (399)
                      ..+...|..
T Consensus       157 v~LiSlMDH  165 (377)
T COG3454         157 VKLISLMDH  165 (377)
T ss_pred             eeEEEecCC
Confidence            555444543

>cd01304 FMDH_A Formylmethanofuran dehydrogenase (FMDH) subunit A; Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor

Probab=99.57  E-value=4.6e-13  Score=131.50  Aligned_cols=236  Identities=19%  Similarity=0.225  Sum_probs=136.0

Q ss_pred             EEccEEEcCCCc---eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC-----CcCch
Q 015826           47 LTSKRIVTPKGV---ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-----EWEGF  118 (399)
Q Consensus        47 i~n~~vv~~~~~---~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-----~~e~~  118 (399)
                      |+|++|+++.+.   .+++|.|+||+|++|++..  +    +.++||++|++|+|||||+|+|+......     ..|+.
T Consensus         1 Ikng~V~d~~~~~~~~~~dI~IedGkIv~Vg~~~--~----~~~vID~~G~~VmPGfID~HtH~~gg~~~~~r~~~pe~~   74 (541)
T cd01304           1 IKNGTVYDPLNGINGEKMDIFIRDGKIVESSSGA--K----PAKVIDASGKVVMAGGVDMHSHIAGGKVNVGRILRPEDH   74 (541)
T ss_pred             CEEEEEEcCCCcccccccEEEEECCEEEEEccCC--C----CCeEEECCCCEEECCeeeeeeCccccccccccccChhhh
Confidence            579999998653   4689999999999998642  1    35799999999999999999999654211     11111


Q ss_pred             H----------------------HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeC---
Q 015826          119 P----------------------SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP---  173 (399)
Q Consensus       119 ~----------------------~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  173 (399)
                      +                      ......++-|.||+++...   |+...+.    ..+.......+|-+.+.-+..   
T Consensus        75 ~~~~~~~~~~~~~~~g~~~pst~~tgy~ya~mGytt~~e~a~---~p~~a~h----~h~e~~~~p~~d~~~~~~~gnn~~  147 (541)
T cd01304          75 RRDPVPKGALRRAGVGFSVPSTLATGYRYAEMGYTTAFEAAM---PPLNARH----THEEMADTPILDKGAYPLLGNNWF  147 (541)
T ss_pred             hccccccccccccCCCccCCCchHhhhHHHhcCcceeecccC---Ccccchh----hhHHhccCccccccceEEecchHH
Confidence            1                      0112345778999987651   2222222    222233334445443322111   


Q ss_pred             -------CChh-hHHHHHHHHH-cCCcEEEEeecCCCC----------------CCCCCCCHHHHHHHHHHHHhcCCCEE
Q 015826          174 -------ENAY-NASALEALLN-AGVLGLKSFMCPSGI----------------NDFPMTNASHIKEGLSVLARYKRPLL  228 (399)
Q Consensus       174 -------~~~~-~~~~l~~l~~-~G~~~ik~~~~~~~~----------------~~~~~~~~~~l~~~~~~a~~~g~~v~  228 (399)
                             ...+ ..+.+.-+++ ....++|+. .+.|.                +++...+.+.++.+.+...++|+|..
T Consensus       148 ~~~~~~~~~~~~~~~~vaw~l~~tk~~giK~v-npgG~~a~~~~~~~~~~d~~~~~~~vtp~~ii~~l~~~~~~lg~ph~  226 (541)
T cd01304         148 VLEYLRDGDMEKLAAYVAWTLKASKGYGIKVV-NPGGTEAWGWGQNVLSLDDPVPYFDITPREILKGLAEANEELGLPHS  226 (541)
T ss_pred             HHHHHhcCCHHHHHHHHHHHHHhccceEEEEE-CCCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCceE
Confidence                   1111 1122222333 356678874 22221                12334456777888888888998876


Q ss_pred             EecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCC----------Ch
Q 015826          229 VHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS----------DA  298 (399)
Q Consensus       229 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s----------~~  298 (399)
                      +|.+...+           ..|..           .|  ...+.+.+++.....-  ..-.+|+.|+.          ..
T Consensus       227 iH~h~nnl-----------g~pgn-----------~~--~t~~t~~~~~~~~~~~--~~~~~h~tH~qfhsyg~~~~~~~  280 (541)
T cd01304         227 IHVHCNNL-----------GVPGN-----------YE--TTLETMKAAEGVKPDP--RRQVLHLTHVQFHSYGGTSWRDF  280 (541)
T ss_pred             EEEccccC-----------CCCCc-----------HH--HHHHHHHHhhcCCCcc--ccceeEeeeeeEEeeccCCcccH
Confidence            66542211           01111           22  3355667766430000  00148999984          11


Q ss_pred             hHHHHHHHHHHHCCCCEEEEcccc
Q 015826          299 SSSLDLLMEAKTNGDSITVETCPH  322 (399)
Q Consensus       299 ~~~l~~i~~ak~~G~~vt~e~~p~  322 (399)
                      ....+.|.++..++.+||+|+.+.
T Consensus       281 ~s~a~~i~~~~n~~~~it~D~G~v  304 (541)
T cd01304         281 ESGAERIADYVNANDHVTIDVGQV  304 (541)
T ss_pred             hHHHHHHHHHHHcCCCEEEEeCce
Confidence            256788889999999999999874

FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen.

>TIGR03121 one_C_dehyd_A formylmethanofuran dehydrogenase subunit A

Probab=99.57  E-value=6.4e-13  Score=131.13  Aligned_cols=176  Identities=21%  Similarity=0.241  Sum_probs=104.2

Q ss_pred             EEEEccEEEcCCCc---eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC-C----CcC
Q 015826           45 YWLTSKRIVTPKGV---ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR-T----EWE  116 (399)
Q Consensus        45 ~li~n~~vv~~~~~---~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~-~----~~e  116 (399)
                      ++|+|++|+++.+.   ..++|.|+||+|++|++..+ .    +.++||++|++|+|||||+|+|+..+.. .    ..+
T Consensus         2 ~iIkng~I~dp~~~~~~~~~dI~IedGkIveIg~~~~-~----~~eVIDa~G~vVmPGfID~HvHg~gG~~~~~R~~~pE   76 (556)
T TIGR03121         2 ILIKNGTVYDPANGIDGEVMDIFIRDGKIVEPVSGGT-K----PAKVIDASGKLVMAGGVDSHTHIAGPKVNVGRLLRPE   76 (556)
T ss_pred             EEEEeEEEEcCCCCccccccEEEEECCEEEEecCCCC-C----CCeEEECCCCEEEeCEEeeeECCCccccccccccCHH
Confidence            57999999998653   24899999999999986432 1    3479999999999999999999986411 0    011


Q ss_pred             c----------------------hHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeC-
Q 015826          117 G----------------------FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-  173 (399)
Q Consensus       117 ~----------------------~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  173 (399)
                      +                      ........++.|+||++|...   |+...+.    ..+.......+|-+.+.-+.. 
T Consensus        77 ~~~~~~~~~~~~~r~Gtt~~lPTt~tt~y~ya~mGyTt~~eaa~---~p~~arh----~h~e~~~~p~~d~~~~~~~gnn  149 (556)
T TIGR03121        77 DHRRDPEPRTGLTRAGSGFSVPSTYATGYRYARMGYTTVFEAAV---PPLNARH----THEEFADTPILDKGGYTLLGNN  149 (556)
T ss_pred             HHhhcchhhhhhcCCCcceEehhHhHHHHHHHhCCccEEecCCC---Cccchhh----hHHHhccCccccccceEEecch
Confidence            1                      112235568899999998862   3222222    222333334455443322111 


Q ss_pred             ---------CChh-hHHHHHHHHH-cCCcEEEEeecCCCC----------------CCCCCCCHHHHHHHHHHHHhcCCC
Q 015826          174 ---------ENAY-NASALEALLN-AGVLGLKSFMCPSGI----------------NDFPMTNASHIKEGLSVLARYKRP  226 (399)
Q Consensus       174 ---------~~~~-~~~~l~~l~~-~G~~~ik~~~~~~~~----------------~~~~~~~~~~l~~~~~~a~~~g~~  226 (399)
                               +..+ ..+.+.-+++ ....++|+. .+.|.                +++...+.+.++.+.+...++|+|
T Consensus       150 ~~~~~~~~~~~~~~~~~~vaw~l~~tk~~giK~v-npgG~~a~~~~~~~~~~d~~~~~~~vtp~~i~~~l~~~~e~l~lp  228 (556)
T TIGR03121       150 WFLLEYLKDGEPEKAAAYVAWLLKATKGYGIKVV-NPGGVEAWGWGENVLSLDDPVPYFGITPREIIKGLARANEELGLP  228 (556)
T ss_pred             HHHHHHHhcCCHHHHHHHHHHHHHhccceEEEEE-CCCchhhhccCCccccccCCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence                     1111 1122232333 356678874 22221                123334566677777777788986


Q ss_pred             --EEEecCC
Q 015826          227 --LLVHAEM  233 (399)
Q Consensus       227 --v~~H~~~  233 (399)
                        +++||.+
T Consensus       229 h~~h~H~nn  237 (556)
T TIGR03121       229 HSIHVHCNN  237 (556)
T ss_pred             ceEEEecCC
Confidence              6666655

Members of this largely archaeal protein family are subunit A of the formylmethanofuran dehydrogenase. Nomenclature in some bacteria may reflect inclusion of the formyltransferase described by TIGR03119 as part of the complex, and therefore call this protein formyltransferase/hydrolase complex Fhc subunit A. Note that this model does not distinguish tungsten (FwdA) from molybdenum-containing (FmdA) forms of this enzyme; a single gene from this family is expressed constitutively in Methanobacterium thermoautotrophicum, which has both tungsten and molybdenum forms and may work interchangeably.

>cd01292 metallo-dependent_hydrolases Superfamily of metallo-dependent hydrolases (also called amidohydrolase superfamily) is a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=99.49  E-value=7.9e-13  Score=121.86  Aligned_cols=212  Identities=25%  Similarity=0.312  Sum_probs=124.5

Q ss_pred             eeecccccCCCCCCC------------------cCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC
Q 015826          100 LIDVHAHLDDPGRTE------------------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI  161 (399)
Q Consensus       100 lID~H~H~~~~~~~~------------------~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (399)
                      |||+|+|+..+....                  ..+.......++++||||++++. ...+.....+.+....+......
T Consensus         1 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvttv~~~~-~~~~~~~~~~~~~~~~~~~~~~~   79 (275)
T cd01292           1 FIDTHVHLDGSALRGTRLNLELKEAEELSPEDLYEDTLRALEALLAGGVTTVVDMG-STPPPTTTKAAIEAVAEAARASA   79 (275)
T ss_pred             CcccchhhHHHHHccCCCccccccccccCHHHHHHHHHHHHHHHHhcCceEEEeeE-eecCccccchHHHHHHHHHHHhc
Confidence            799999997653221                  12244566788999999999987 33222222233444444433221


Q ss_pred             ceeEEeeeeeeCCC--------hhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          162 YVDVGFWGGLVPEN--------AYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       162 ~~~~~~~~~~~~~~--------~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .+...+..+..+..        ....+.+.+..+.|+.+++.+.....    ...+.+.++++++.|+++|+++.+|+.+
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~gi~~~~~~~~----~~~~~~~~~~~~~~a~~~~~~i~~H~~~  155 (275)
T cd01292          80 GIRVVLGLGIPGVPAAVDEDAEALLLELLRRGLELGAVGLKLAGPYTA----TGLSDESLRRVLEEARKLGLPVVIHAGE  155 (275)
T ss_pred             CeeeEEeccCCCCccccchhHHHHHHHHHHHHHhcCCeeEeeCCCCCC----CCCCcHHHHHHHHHHHHcCCeEEEeeCC
Confidence            22332222222211        11234444444457888887543321    1147899999999999999999999865


Q ss_pred             hhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCC
Q 015826          234 EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD  313 (399)
Q Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~  313 (399)
                      ....                            ...+.++++....        +.++.+.|....  .-+.++..++.  
T Consensus       156 ~~~~----------------------------~~~~~~~~~~~~~--------~~~~~~~H~~~~--~~~~~~~~~~~--  195 (275)
T cd01292         156 LPDP----------------------------TRALEDLVALLRL--------GGRVVIGHVSHL--DPELLELLKEA--  195 (275)
T ss_pred             cccC----------------------------ccCHHHHHHHHhc--------CCCEEEECCccC--CHHHHHHHHHc--
Confidence            4310                            0022334444321        457899999863  12334444444  


Q ss_pred             CEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCC
Q 015826          314 SITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT  372 (399)
Q Consensus       314 ~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~  372 (399)
                      .+++++||++.....                +....+..+++.++.|...+++||+.+.
T Consensus       196 g~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~g~~~~lgTD~~~~  238 (275)
T cd01292         196 GVSLEVCPLSNYLLG----------------RDGEGAEALRRLLELGIRVTLGTDGPPH  238 (275)
T ss_pred             CCeEEECCccccccc----------------CCcCCcccHHHHHHCCCcEEEecCCCCC
Confidence            577888997654321                2233456678889999999999999775

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The family includes urease alpha, adenosine deaminase, phosphotriesterase dihydroorotases, allantoinases, hydantoinases, AMP-, adenine and cytosine deaminases, imidazolonepropionase, aryldialkylphosphatase, chlorohydrolases, formylmethanofuran dehydrogenases and others.

>cd01295 AdeC Adenine deaminase (AdeC) directly deaminates adenine to form hypoxanthine

Probab=99.47  E-value=3.9e-12  Score=125.24  Aligned_cols=136  Identities=23%  Similarity=0.316  Sum_probs=98.4

Q ss_pred             eCCCCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeee
Q 015826           90 DYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG  169 (399)
Q Consensus        90 D~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (399)
                      |++|++|+|||||+|+|+..++..    ....++.++.+||||+++++ +..+.....+.++..++... +..+++.+..
T Consensus         1 Da~G~~v~PG~ID~H~Hi~~~~~~----~~~~~~~a~~~GvTtvv~~p-~~~~~v~g~~~~~~~~~~a~-~~p~~~~~~~   74 (422)
T cd01295           1 DAEGKYIVPGFIDAHLHIESSMLT----PSEFAKAVLPHGTTTVIADP-HEIANVAGVDGIEFMLEDAK-KTPLDIFWML   74 (422)
T ss_pred             CCCCCEEccCEEEccCCcCCCCCC----hHHHHHHHHCCCcEEEEeCC-CCCCcCCCHHHHHHHHHHHh-CCCceEEEeC
Confidence            789999999999999999876542    34467899999999999998 44455566778887777543 3344554333


Q ss_pred             ee-eCCCh-----h--hHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          170 GL-VPENA-----Y--NASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       170 ~~-~~~~~-----~--~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      .. .+...     .  ..++++++.+ .|+.+++.+|.+++.    ..+++.+.+.++.|+++|+++.+|+....
T Consensus        75 p~~vp~t~~e~~g~~~~~~~i~~l~~~~~vvglgE~md~~~v----~~~~~~l~~~i~~A~~~g~~v~~Ha~g~~  145 (422)
T cd01295          75 PSCVPATPFETSGAELTAEDIKELLEHPEVVGLGEVMDFPGV----IEGDDEMLAKIQAAKKAGKPVDGHAPGLS  145 (422)
T ss_pred             CCcCCCCCCCCCCCcCCHHHHHHHhcCCCCcEEEEeccCccc----cCCcHHHHHHHHHHHhCCCEEEEeCCCCC
Confidence            21 11010     1  3677888877 499999988765421    34667899999999999999999996543

This reaction is part of one of the adenine salvage pathways, as well as the degradation pathway. It is important for adenine utilization as a purine, as well as a nitrogen source in bacteria and archea.

>KOG3968 consensus Atrazine chlorohydrolase/guanine deaminase [Nucleotide transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]

Probab=99.41  E-value=8.4e-13  Score=123.01  Aligned_cols=256  Identities=20%  Similarity=0.195  Sum_probs=133.6

Q ss_pred             eeEEEEEC-CEEEEeccCCCCCC-------CCCCCcEEeCCCCEEecceeeccccc-CCC-----CC-------------
Q 015826           60 SGAVEIKE-GNIISIVSEEDWPR-------NSKTGQVVDYGEAVIMPGLIDVHAHL-DDP-----GR-------------  112 (399)
Q Consensus        60 ~~~V~I~d-G~I~~Ig~~~~~~~-------~~~~~~vID~~G~~vlPGlID~H~H~-~~~-----~~-------------  112 (399)
                      +..+.|.| |||+.|++....+.       ..+..++++.+|+++||||||+|+|. .+-     +.             
T Consensus        27 ~~sl~Vd~~GKi~~i~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~mPGfVdtH~H~a~q~~~s~~g~d~pll~wl~~~~f  106 (439)
T KOG3968|consen   27 GSSLGVDDTGKIVFIGKAYFDENKLKGEGVEKENTKIKLSSGHFLMPGFVDTHIHPAHQFAMSGAGTDMPLLQWLGKYTF  106 (439)
T ss_pred             CcceeecCCccEEEeeccccchhhhcccccccccceeeecCCcEEecceeecccchHhhhhhhccccCcHHHHHhhccee
Confidence            45678887 99999997643321       01345789999999999999999993 111     10             


Q ss_pred             ------CCcCc----hHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCce-----eEEeeee--eeCCC
Q 015826          113 ------TEWEG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYV-----DVGFWGG--LVPEN  175 (399)
Q Consensus       113 ------~~~e~----~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--~~~~~  175 (399)
                            ...++    +....+.++++|+||+..+. ..+  ..+...+.+.......+..+     +...+..  .....
T Consensus       107 ~le~~~~~~e~~~q~~~~vv~~mL~~GTTt~~~f~-~~~--~~s~~ll~~~~~~~G~R~~igkv~m~~~~~~~p~~~~~~  183 (439)
T KOG3968|consen  107 PLEATFTNEEDARQVYQRVVKEMLRAGTTTVEYFS-TLH--LDSELLLARAAIRAGQRALIGKVCMDCNAHAVPKGVETT  183 (439)
T ss_pred             ecchhhhhHHHHHHHHHHHHHHHHHcCceehhhhh-ccC--chhHHHHHHHHHHhCCceeeeeehhccCCCCCCccchhH
Confidence                  00012    22345788999999998765 111  11112222222222122211     1111000  01111


Q ss_pred             hhhHHHHHHH-------HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhchhHHhhccCc
Q 015826          176 AYNASALEAL-------LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGSERHVKLEDDT  247 (399)
Q Consensus       176 ~~~~~~l~~l-------~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~~~~~~~~~~~  247 (399)
                      ++.++..+++       .+.+...+.   .+   .-.+.|+.+.+....+.|+.++++++.|. ++.+++.-...-...+
T Consensus       184 E~si~~t~~~i~~~~~~~~~~~~~~v---t~---~fa~~c~k~v~~~l~~lak~~~l~~q~hIsen~~EI~~~~~ff~~~  257 (439)
T KOG3968|consen  184 EESIESTEDLIPKLEKLKREKVNPIV---TP---RFAASCSKGVFEELSKLAKYHNLHIQIHISENGKEIEAVKNFFPEK  257 (439)
T ss_pred             HHHHHHHHHHHHHHHhhccCCCCCcc---cc---cccCCCcchhHHHHHHHHHhhhhhhhhhhhhcHHHHHHHHHhhhhc
Confidence            1222222222       223332211   11   12346788888888899999999999996 6666544222111100


Q ss_pred             CCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccc
Q 015826          248 LDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFS  327 (399)
Q Consensus       248 ~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~  327 (399)
                      ..+               .........+..+        .+-.|.+|+++  +.++++.+.   |  ..+..||-     
T Consensus       258 ~~y---------------~~~yd~~~lL~~k--------tvlaH~~hl~d--~ei~~l~k~---g--~svshCP~-----  302 (439)
T KOG3968|consen  258 LSY---------------TDVYDKGGLLTEK--------TVLAHLEHLSD--EEIELLAKR---G--CSVSHCPT-----  302 (439)
T ss_pred             ccc---------------hHHHHHhcccchH--------hHhhhheecCc--hhHHHHHhc---C--CceEECCc-----
Confidence            100               0111111112211        23468999988  567777665   3  44556773     


Q ss_pred             cccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCC
Q 015826          328 AEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTV  373 (399)
Q Consensus       328 ~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~  373 (399)
                      ++.+-..|     .|         .+.+.|..|.+..+|||-++++
T Consensus       303 Sn~~L~sG-----~~---------~vr~lL~~~v~VgLGtDv~~~s  334 (439)
T KOG3968|consen  303 SNSILGSG-----IP---------RVRELLDIGVIVGLGTDVSGCS  334 (439)
T ss_pred             chhhhccC-----Cc---------cHHHHHhcCceEeecCCccccc
Confidence            11110111     12         3556788899999999999765

>COG1820 NagA N-acetylglucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]

Probab=99.32  E-value=7.6e-11  Score=110.46  Aligned_cols=86  Identities=31%  Similarity=0.549  Sum_probs=70.3

Q ss_pred             EEEEccEEEcCCCce-eeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC----CCcCchH
Q 015826           45 YWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR----TEWEGFP  119 (399)
Q Consensus        45 ~li~n~~vv~~~~~~-~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~----~~~e~~~  119 (399)
                      ..++|++|+++.+.. ++.|.|+||+|.+|.+ .+.+   ...++||.+|.+|+|||||+|+|......    .+.+++.
T Consensus         2 ~~~~~~~i~t~~~~~~~~~v~i~dg~I~~i~~-~~~p---~~~e~id~~G~~l~PGfID~hihG~gG~~~~D~~~~~~l~   77 (380)
T COG1820           2 YALKNGRIFTGHGVLDGGAVVIEDGKIEAVVP-AELP---ADAEIIDLKGALLVPGFIDLHIHGGGGADFMDAGSVETLE   77 (380)
T ss_pred             ceeeccEEEcCcceEECcEEEEcCCEEEEEec-CcCC---CcceeecCCCCEecccEEEEeecCcCcccccCccCHHHHH
Confidence            368999999999976 5699999999999998 2232   36789999999999999999999875422    2334566


Q ss_pred             HHHHHHHcCCeeeee
Q 015826          120 SGTKAAAAGGITTLI  134 (399)
Q Consensus       120 ~~~~~al~~GvTtv~  134 (399)
                      ..++..++.|||+++
T Consensus        78 ~i~~~~~~~GtTsfL   92 (380)
T COG1820          78 TMAEAHLRHGTTSFL   92 (380)
T ss_pred             HHHHHhhhcCeeeee
Confidence            778888999999997

>PF13147 Amidohydro_4: Amidohydrolase; PDB: 3SFW_B 2FTW_A 2PUZ_B 2GOK_B 3HM7_E 3D6N_A 1XRT_A 1XRF_A 1YNY_B 1K1D_F

Probab=99.31  E-value=3.2e-11  Score=112.54  Aligned_cols=239  Identities=26%  Similarity=0.279  Sum_probs=122.9

Q ss_pred             eCCCCEEecceeecccc--cCCC--CCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeE
Q 015826           90 DYGEAVIMPGLIDVHAH--LDDP--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV  165 (399)
Q Consensus        90 D~~G~~vlPGlID~H~H--~~~~--~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (399)
                      |++|++|+|||||+|+|  ....  +....+.....++.++.+|+|++++++ +.     ....+......     ....
T Consensus         1 D~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~G~tt~~~~~-~~-----~~~~~~~~~~~-----~~~~   69 (304)
T PF13147_consen    1 DASGKYVLPGLIDLHVHGPLGRSEDGAPWAEQAAAASAAALAGGVTTVVDMP-GT-----NPEELNRARRR-----GAGY   69 (304)
T ss_dssp             E-TTSEEEE-EEEEEEECCSSCETTTEEHSSHHHHHHHHHHHTTEEEEEESS-SS-----SHHHHHHHHHH-----ESEE
T ss_pred             CCCCCEEccceeeeeeCCCcCCCCCCccchhhHHHHHHHHHhCCEeEEecCC-CC-----CchhhHHHHhh-----cccc
Confidence            89999999999999999  2221  111223445667888999999999865 21     22222222222     1111


Q ss_pred             EeeeeeeCCChhh---HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCC-CEEEecCChhhchhHH
Q 015826          166 GFWGGLVPENAYN---ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR-PLLVHAEMEKGSERHV  241 (399)
Q Consensus       166 ~~~~~~~~~~~~~---~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~-~v~~H~~~~~~~~~~~  241 (399)
                      .....  ......   .+.+......+.  .+.....      .......+.+..+.+++.|. .+..|+... ......
T Consensus        70 ~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  138 (304)
T PF13147_consen   70 PGSGA--GPRGTTIEELEALVDLIAAEG--VGFVAAY------NGIEGPGLQAAIRAAHRAGVIKVVGHSPAD-GIEGAI  138 (304)
T ss_dssp             EEECE--SCCHHHHHHHHHHHHHHHHTE--EEEESSS------THHHHHHHHHHHHHHHHHTHEEEEEECHHH-HHHHHH
T ss_pred             ccccc--cccccchHHHHHHHHHHhhcC--cceeecc------ccCCHHHHHHHHHHHHhcCCeeeecccchh-hHHHHH
Confidence            11111  111122   233333333333  2322211      12456788888889999994 444455333 211111


Q ss_pred             hhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccc
Q 015826          242 KLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCP  321 (399)
Q Consensus       242 ~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p  321 (399)
                      ....     ... ...   ...................       +..+++...... ...+.+...+..++..+...  
T Consensus       139 ~~~~-----~~~-~~~---~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--  199 (304)
T PF13147_consen  139 AEGL-----DAM-EHI---LPHEVAEALHLAEALAQGA-------GPGLHCHVASDD-ATAEGVAIAHGFGLPPTPLH--  199 (304)
T ss_dssp             HHHH-----HTT-HHS---THHHHHHHHHHHHHHHHHH-------THCEEEEETSSH-HHHHHHHHHHHTTHEEEEEE--
T ss_pred             Hhcc-----cch-hhh---hhhhHHHHHHHHHHhhhcc-------ccchhhhhhhhh-hhhHHHHHHHhhccccchHH--
Confidence            1100     000 000   1111122222222233222       445555555554 33332555555665554443  


Q ss_pred             cccccccccCCCCCcceEEcCCCC--ChhhHHHHHHHHhcCCccEEeCCCCCCC
Q 015826          322 HYLAFSAEEIPDGDTRFKCAPPIR--DAANKEKLWEALMDGHIDMLSSDHSPTV  373 (399)
Q Consensus       322 ~~L~~~~~~~~~~~~~~~~~Pplr--~~~~~~~l~~~l~~G~id~i~sdh~p~~  373 (399)
                       .+.-.....   +..++++||++  ....+..+++.++.|+..+++|||.++.
T Consensus       200 -~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~l~~~Gv~~~l~sD~~~~~  249 (304)
T PF13147_consen  200 -LLARDAAAA---GIRFKVLPPLRLDLREDRAALRELLEAGVPVALGSDHAPSS  249 (304)
T ss_dssp             -HHHHHHHHH---GGGGEESSCHHHHTHHHHHHHHHHHHTTSSEEEEE-BBTTT
T ss_pred             -hhHHHHHhc---CceeeeCCCccccchhhhHHHHHHHhCCCeEEEEcCCcccc
Confidence             111111111   46789999999  9999999999999999999999999874

...

>cd01309 Met_dep_hydrolase_C Metallo-dependent hydrolases, subgroup C is part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site

Probab=99.25  E-value=2.2e-10  Score=110.46  Aligned_cols=68  Identities=34%  Similarity=0.497  Sum_probs=50.9

Q ss_pred             CCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC----------CcC-------------chHHHHH
Q 015826           67 EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT----------EWE-------------GFPSGTK  123 (399)
Q Consensus        67 dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~----------~~e-------------~~~~~~~  123 (399)
                      ||||++|++....+   .+.++||++|++|+|||||+|+|++.....          ...             .......
T Consensus         1 ~gkI~~i~~~~~~~---~~~~vid~~g~~v~Pg~id~h~h~~~~~~~~~~~~~d~~e~~~~~~p~~~~~d~~~~~~~~~~   77 (359)
T cd01309           1 DGKIVAVGAEITTP---ADAEVIDAKGKHVTPGLIDAHSHLGLDEEGGVRETSDANEETDPVTPHVRAIDGINPDDEAFK   77 (359)
T ss_pred             CCEEEEEcCCCCCC---CCCeEEeCCCCEEcCcEEecccccCccccCCCcCcCCccccCCCCCceeEeecccCCCCHhHH
Confidence            79999999865433   367899999999999999999999754211          000             1123467


Q ss_pred             HHHcCCeeeeecCc
Q 015826          124 AAAAGGITTLIDMP  137 (399)
Q Consensus       124 ~al~~GvTtv~d~~  137 (399)
                      .++++|||++...|
T Consensus        78 ~a~~~GvT~~~v~p   91 (359)
T cd01309          78 RARAGGVTTVQVLP   91 (359)
T ss_pred             HHHhcCceEEEecC
Confidence            78999999998776

The vast majority of the members have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. The function of this subgroup is unknown.

>PF12890 DHOase: Dihydro-orotase-like; InterPro: IPR024403 This entry represents a small family of dihydro-orotase-like proteins from bacteria

Probab=99.23  E-value=8.9e-12  Score=97.85  Aligned_cols=140  Identities=26%  Similarity=0.425  Sum_probs=95.1

Q ss_pred             CCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeee
Q 015826           93 EAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV  172 (399)
Q Consensus        93 G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (399)
                      |++++|||||.|+|++.+|+..++.+..           |+..|| ++.|..                ..+.+.      
T Consensus         1 ~kli~~g~vd~hVhlrepg~~~keti~t-----------T~~amp-nt~paP----------------a~itv~------   46 (142)
T PF12890_consen    1 GKLILPGLVDVHVHLREPGFEAKETIET-----------TWCAMP-NTFPAP----------------AGITVE------   46 (142)
T ss_pred             Cceeehhhhhhhhhhhcccchhhhhhhc-----------eeeecC-ccCCCC----------------cceeee------
Confidence            6899999999999999998876655432           888898 776654                001110      


Q ss_pred             CCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchh
Q 015826          173 PENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS  252 (399)
Q Consensus       173 ~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~  252 (399)
                      ....              .+|.  ++.   ++........+.+.++. ++++.++..||+|++....+.++.++ . +..
T Consensus        47 ~~~~--------------e~~a--fsd---dg~giq~~~lm~eamk~-a~l~~~i~ahceDd~l~~~g~v~~ge-~-~q~  104 (142)
T PF12890_consen   47 DDGE--------------EAFA--FSD---DGYGIQIQLLMYEAMKK-AELDQEIVAHCEDDELTNGGVVHDGE-L-PQF  104 (142)
T ss_pred             ecCc--------------ceEE--Eec---CCceeeeHHHHHHHHHH-HHcccHHHHhhcccccccccccccch-h-hHH
Confidence            0000              0121  111   22233466778888888 88999999999999887777666541 1 222


Q ss_pred             hhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh
Q 015826          253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA  298 (399)
Q Consensus       253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~  298 (399)
                      +..++++   .+|..-+.+.+.+++++       |+..||+|+|+.
T Consensus       105 ~g~~L~G---~cEs~~~~rd~lLak~~-------g~~yhVchvstk  140 (142)
T PF12890_consen  105 LGVYLKG---NCESVQCARDVLLAKAT-------GCHYHVCHVSTK  140 (142)
T ss_pred             hCCcCCC---cchHHHHHHHHHhhhcc-------CCcEEEEEEecc
Confidence            2222333   67888899999999975       999999999986

>COG1229 FwdA Formylmethanofuran dehydrogenase subunit A [Energy production and conversion]

Probab=99.13  E-value=1.2e-09  Score=101.27  Aligned_cols=64  Identities=19%  Similarity=0.350  Sum_probs=52.6

Q ss_pred             CccEEEEccEEEcCCCc---eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC
Q 015826           42 YNQYWLTSKRIVTPKGV---ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP  110 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~---~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~  110 (399)
                      ++.++|+||-|+||-..   ...||.|+||||+.-..-.+     ...+|||++|++||||-||.|+|+..+
T Consensus         2 ~~e~~IKNg~V~dPlngingE~MDI~vkdGKIVe~sev~~-----~~aKVIDA~gklvm~GGvD~HsHvAG~   68 (575)
T COG1229           2 AMEILIKNGIVYDPLNGINGEKMDICVKDGKIVEESEVSE-----SKAKVIDASGKLVMPGGVDSHSHVAGA   68 (575)
T ss_pred             CceEEeecCEEecCccCCCCceeeEEeecCeEeeeccccc-----ccceEEeccCcEEecCccccccccccc
Confidence            46799999999998653   47899999999987643221     136899999999999999999999764

>cd01305 archeal_chlorohydrolases Predicted chlorohydrolases

Probab=99.05  E-value=2.7e-09  Score=98.43  Aligned_cols=21  Identities=24%  Similarity=0.387  Sum_probs=19.6

Q ss_pred             HHHHHHHHHhcCCCEEEecCC
Q 015826          213 IKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       213 l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ++++++.|+++|+++++|+..
T Consensus       127 l~~~~~~A~~~g~~v~~H~~e  147 (263)
T cd01305         127 LEDILELLRRRGKLFAIHASE  147 (263)
T ss_pred             HHHHHHHHHHCCCeeEEecCC
Confidence            999999999999999999854

These metallo-dependent hydrolases from archea are part of the superfamily of metallo-dependent hydrolases, a large group of proteins that show conservation in their 3-dimensional fold (TIM barrel) and in details of their active site. They have a conserved metal binding site, involving four histidines and one aspartic acid residue. In the common reaction mechanism, the metal ion (or ions) deprotonate a water molecule for a nucleophilic attack on the substrate. Some members of this subgroup are predicted to be chlorohyrolases.

>cd01306 PhnM PhnM is believed to be a subunit of the membrane associated C-P lyase complex

Probab=99.00  E-value=3.8e-08  Score=92.66  Aligned_cols=211  Identities=20%  Similarity=0.216  Sum_probs=112.2

Q ss_pred             ecceeecccccCCCCCC-----Cc---CchHHHHHHHHcCCeeeeecCcCCC-CCCC-CcHHHHHHHHHHH---h--ccC
Q 015826           97 MPGLIDVHAHLDDPGRT-----EW---EGFPSGTKAAAAGGITTLIDMPLNS-DPST-ISTETLKLKVDAA---E--KRI  161 (399)
Q Consensus        97 lPGlID~H~H~~~~~~~-----~~---e~~~~~~~~al~~GvTtv~d~~~~~-~~~~-~~~~~~~~~~~~~---~--~~~  161 (399)
                      +|||||+|+-..+.-..     .|   ..+...-++.+.+||||+++.-+-. .... ...+......+..   .  +..
T Consensus         1 lPG~vdlH~D~~E~~~~PRp~v~~~~~~a~~~~d~~~~a~GiTT~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (325)
T cd01306           1 LPGLIDLHTDNLEKHVMPRPGVDWPMDIALAAHDRQLAAAGITTVFDALSFGDEEGGRRRLRNLRKLIDAIRELHARGVL   80 (325)
T ss_pred             CCCeEEecCcchhcccCCCCCCCCCHHHHHHHHHHHHHhcCcccceeeeEeccccCCcccHHHHHHHHHHHHHhhhCCcc
Confidence            69999999965432111     11   1233445678899999998864211 1222 2344444433322   2  233


Q ss_pred             ceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCC---------------------------------CCCC
Q 015826          162 YVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND---------------------------------FPMT  208 (399)
Q Consensus       162 ~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~---------------------------------~~~~  208 (399)
                      .++..++....-...+..+.+.++++.+-..+-.+|.......                                 ....
T Consensus        81 ~~d~~~hlR~E~~~~~~~~~~~~~~~~~~v~lvs~~dH~pg~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (325)
T cd01306          81 RADHRLHLRCELADPAVLPELESLMADPRVHLVSLMDHTPGQRQFRDLEKYREYYAKKYGLSDEEVEEAILERKARAAAY  160 (325)
T ss_pred             hhhcceEEEEeecCccHHHHHHHHhcCCCcCEEEEeCCCCccccccCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHhhhc
Confidence            4455555444334455667777777766555444554321000                                 0123


Q ss_pred             CHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCc
Q 015826          209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA  288 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~  288 (399)
                      +.++++++++.|+++|+++.+|+.....                               .+.+..+.           |+
T Consensus       161 ~~~~~~~iv~~A~~~gl~vasH~d~~~~-------------------------------~v~~a~~~-----------Gv  198 (325)
T cd01306         161 APANRSELAALARARGIPLASHDDDTPE-------------------------------HVAEAHEL-----------GV  198 (325)
T ss_pred             CHHHHHHHHHHHHHCCCcEEEecCCChH-------------------------------HHHHHHHC-----------CC
Confidence            4566777777777777777777643210                               12222221           33


Q ss_pred             eEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCC
Q 015826          289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSD  368 (399)
Q Consensus       289 ~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sd  368 (399)
                      . .+.|..+    .+.++.++++|+.+.+. .| ++.       .++          +......++++++.|..++++||
T Consensus       199 ~-~~E~p~t----~e~a~~a~~~G~~vv~g-ap-n~l-------rg~----------s~~g~~~~~~ll~~Gv~~al~SD  254 (325)
T cd01306         199 V-ISEFPTT----LEAAKAARELGLQTLMG-AP-NVV-------RGG----------SHSGNVSARELAAHGLLDILSSD  254 (325)
T ss_pred             e-eccCCCC----HHHHHHHHHCCCEEEec-Cc-ccc-------cCc----------cccccHhHHHHHHCCCeEEEEcC
Confidence            2 2344333    45556666777766542 12 110       001          11123467889999999999999


Q ss_pred             CCCCC
Q 015826          369 HSPTV  373 (399)
Q Consensus       369 h~p~~  373 (399)
                      |.|.+
T Consensus       255 ~~p~s  259 (325)
T cd01306         255 YVPAS  259 (325)
T ss_pred             CCcHh
Confidence            98875

C-P lyase is thought to catalyze the direct cleavage of inactivated C-P bonds to yield inorganic phosphate and the corresponding hydrocarbons. It is responsible for cleavage of alkylphosphonates, which are utilized as sole phosphorus sources by many bacteria.

>PRK06886 hypothetical protein; Validated

Probab=98.87  E-value=2.1e-07  Score=87.84  Aligned_cols=199  Identities=13%  Similarity=0.118  Sum_probs=106.4

Q ss_pred             HHHHHHcCCeeeeecCcCCCCC--CCCcHHHHHHHHHHHhccCceeEE-e-eeeeeCCChhhHHHHHHHHHcCCcEEEEe
Q 015826          121 GTKAAAAGGITTLIDMPLNSDP--STISTETLKLKVDAAEKRIYVDVG-F-WGGLVPENAYNASALEALLNAGVLGLKSF  196 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~l~~~G~~~ik~~  196 (399)
                      ..+.++.+|||.++.+. +..|  .....+.+.+.++..+...-+.+. + .-++..  +...+.+++..+. ++.+.-.
T Consensus        74 ~l~~~~~~Gtt~iRtHv-dvd~~~~l~~~~a~~~~r~~~~~~idlq~vafPq~g~~~--~~~~~l~~~al~~-advvGGi  149 (329)
T PRK06886         74 AIELMISQGVTAFGTFV-DIDPICEDRAIIAAHKAREVYKHDIILKFANQTLKGVIE--PTAKKWFDIGSEM-VDMIGGL  149 (329)
T ss_pred             HHHHHHHcCcccEeeee-ccCCCccccHHHHHHHHHHHhcCcceEEEEecChhhccC--ccHHHHHHHHHHh-CCEEeCc
Confidence            35567899999999887 4444  234566666666666554333332 1 112221  2233455555444 4433221


Q ss_pred             ecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHH
Q 015826          197 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA  276 (399)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a  276 (399)
                        +.........+.+.++.+++.|+++|+++.+|+.+.....                           ...+..+.+..
T Consensus       150 --P~~~~~~~~~~~e~l~~~~~lA~~~g~~Id~Hlde~~~~~---------------------------~~~le~l~~~~  200 (329)
T PRK06886        150 --PYRDELDYGRGLEAMDILLDTAKSLGKMVHVHVDQFNTPK---------------------------EKETEQLCDKT  200 (329)
T ss_pred             --cCCcCCCCCCCHHHHHHHHHHHHHcCCCeEEeECCCCchh---------------------------HHHHHHHHHHH
Confidence              1110011135678999999999999999999986432110                           01222222222


Q ss_pred             hhhccCCCCCCceEEEEcCCCh-----hHHHHHHHHHHHCCCCEEEEcccc-ccccccccCCCCCcceEEcCCCCChhhH
Q 015826          277 KDTRTDGPAEGAHLHIVHLSDA-----SSSLDLLMEAKTNGDSITVETCPH-YLAFSAEEIPDGDTRFKCAPPIRDAANK  350 (399)
Q Consensus       277 ~~~~~~~~~~g~~vhi~H~s~~-----~~~l~~i~~ak~~G~~vt~e~~p~-~L~~~~~~~~~~~~~~~~~Pplr~~~~~  350 (399)
                      .+.++     +.++.++|.+..     .+..++++..++.|+.|++  ||. +|.++...    +    .. |++..  .
T Consensus       201 ~~~Gl-----~grV~~sH~~~L~~~~~~~~~~~i~~La~agi~Vv~--~P~snl~l~~~~----~----~~-p~~rG--v  262 (329)
T PRK06886        201 IEHGM-----QGRVVAIHGISIGAHSKEYRYRLYQKMREADMMVIA--CPMAWIDSNRKE----D----LM-PFHNA--L  262 (329)
T ss_pred             HHcCC-----CCCEEEEEeccccCcChhhHHHHHHHHHHcCCeEEE--Cchhhhhhcccc----c----cC-cCCCC--C
Confidence            23321     447888887643     1334467777777776554  553 23222110    0    01 11110  1


Q ss_pred             HHHHHHHhcCCccEEeCCCC
Q 015826          351 EKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       351 ~~l~~~l~~G~id~i~sdh~  370 (399)
                      -.+.+.++.|+.-.+|||..
T Consensus       263 ~pv~eL~~aGV~V~lGtDnv  282 (329)
T PRK06886        263 TPADEMIPEGITVALGTDNI  282 (329)
T ss_pred             CCHHHHHHCCCeEEEecCCC
Confidence            12456677899999999975

>PF01979 Amidohydro_1: Amidohydrolase family; InterPro: IPR006680 This group of enzymes represents a large metal dependent hydrolase superfamily []

Probab=98.51  E-value=1.2e-07  Score=90.37  Aligned_cols=43  Identities=47%  Similarity=0.821  Sum_probs=35.6

Q ss_pred             EEecceeecccccCCCCCC-------CcCchHHHHHHHHcCCeeeeecCc
Q 015826           95 VIMPGLIDVHAHLDDPGRT-------EWEGFPSGTKAAAAGGITTLIDMP  137 (399)
Q Consensus        95 ~vlPGlID~H~H~~~~~~~-------~~e~~~~~~~~al~~GvTtv~d~~  137 (399)
                      +|+|||||+|+|+..+...       ..+.+...++.++++||||+++++
T Consensus         1 ~v~PGlID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~   50 (333)
T PF01979_consen    1 YVMPGLIDAHVHGGQGGLRGLLDPEDHYESIRTGAKAALKGGVTTVLDTP   50 (333)
T ss_dssp             EEEE-EEEEEEEGGGTTHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred             CEEcChhHHhhCcCCcCccccCCHHHHHHHHHHHHHHHHhcCeEEEEcCc
Confidence            6899999999999987655       344566778899999999999996

The family includes adenine deaminase (3.5.4.2 from EC) that hydrolyses adenine to form hypoxanthine and ammonia. The adenine deaminase reaction is important for adenine utilization as a purine and also as a nitrogen source []. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases (3.5.1.25 from EC). These enzymes catalyse the reaction: N-acetyl-D-glucosamine 6-phosphate + H2O = D-glucosamine 6-phosphate + acetateThis family includes dihydroorotase and urease which belong to MEROPS peptidase family M38 (beta-aspartyl dipeptidase, clan MJ), where they are classified as non-peptidase homologs. ; GO: 0016787 hydrolase activity; PDB: 1O12_A 2KAU_C 1FWD_C 1A5M_C 1FWC_C 1FWI_C 1EJV_C 1FWH_C 1A5L_C 1KRA_C ....

>cd01310 TatD_DNAse TatD like proteins; E

Probab=98.33  E-value=2.9e-05  Score=70.87  Aligned_cols=123  Identities=21%  Similarity=0.204  Sum_probs=67.8

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCC----
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN----  175 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  175 (399)
                      ++|+|+|+......  .+.....+.+...||++++.+..  .     .+..+...+.+...  .++....++.+..    
T Consensus         1 ~~D~H~H~~~~~~~--~~~~~~l~~~~~~gv~~~v~~~~--~-----~~~~~~~~~la~~~--~~i~~~~G~hP~~~~~~   69 (251)
T cd01310           1 LIDTHCHLDFPQFD--ADRDDVLARAREAGVIKIIVVGT--D-----LKSSKRALELAKKY--DNVYAAVGLHPHDADEH   69 (251)
T ss_pred             CEEeeeCCCchhhc--cCHHHHHHHHHHcCCCEEEEeCC--C-----HHHHHHHHHHHHhC--CCeEEEEeeCcchhhcC
Confidence            68999999754321  23455566777889999987762  1     12222223333222  1222222333322    


Q ss_pred             -hhhHHHHHHHHHc-CCcEE-EEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          176 -AYNASALEALLNA-GVLGL-KSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       176 -~~~~~~l~~l~~~-G~~~i-k~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                       ....++++++++. ++.++ ++.+.............+.++.+++.|+++|+||.+|+..
T Consensus        70 ~~~~~~~l~~~~~~~~~~~IGeiGld~~~~~~~~~~q~~~~~~~~~~a~e~~~pv~iH~~~  130 (251)
T cd01310          70 VDEDLDLLELLAANPKVVAIGEIGLDYYRDKSPREVQKEVFRAQLELAKELNLPVVIHSRD  130 (251)
T ss_pred             CHHHHHHHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeC
Confidence             1235666666643 55566 3333221000000134578899999999999999999853

coli TatD is a cytoplasmic protein, shown to have magnesium dependent DNase activity.

>KOG3892 consensus N-acetyl-glucosamine-6-phosphate deacetylase [Carbohydrate transport and metabolism]

Probab=98.06  E-value=6.8e-06  Score=72.80  Aligned_cols=91  Identities=16%  Similarity=0.254  Sum_probs=64.9

Q ss_pred             EEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC-CC-Cc----Cch
Q 015826           45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RT-EW----EGF  118 (399)
Q Consensus        45 ~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~~-~~----e~~  118 (399)
                      +-+.|++|+-..+....++.|+||||..=.+-- ..++..+...|||.|+++.|||||.....+..- ++ ..    +.+
T Consensus        14 lQFtNCrilR~g~l~~edlWVR~GRIldpe~vF-FeErt~Ad~riDCgG~IlaPGfIDlQiNGGfGvDFS~dte~~~eGv   92 (407)
T KOG3892|consen   14 LQFTNCRILRGGKLLREDLWVRGGRILDPEKVF-FEERTVADERIDCGGRILAPGFIDLQINGGFGVDFSQDTEDVGEGV   92 (407)
T ss_pred             eeeeeeEEeeCCceeehheeEeCCeecCccccc-ceeccchhheeccCCeeecCceEEEEecCccccccccchhhhhhhH
Confidence            448899999887777889999999997543311 011113567899999999999999998765431 22 12    334


Q ss_pred             HHHHHHHHcCCeeeeecC
Q 015826          119 PSGTKAAAAGGITTLIDM  136 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~  136 (399)
                      ..-++..+++|+|++.--
T Consensus        93 AlVAr~ll~hGvtsf~Pt  110 (407)
T KOG3892|consen   93 ALVARQLLSHGVTSFCPT  110 (407)
T ss_pred             HHHHHHHHhcCCCcCCCc
Confidence            455788899999998743

>TIGR00010 hydrolase, TatD family

Probab=98.02  E-value=9.9e-05  Score=67.37  Aligned_cols=123  Identities=23%  Similarity=0.280  Sum_probs=66.4

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCC----
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN----  175 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  175 (399)
                      |||+|+|+......  .+.....+.+...|+++++++..  .     ....+...+......  .+....++.+..    
T Consensus         1 ~iD~H~Hl~~~~~~--~~~~~~~~~~~~~Gv~~~v~~~~--~-----~~~~~~~~~~~~~~~--~i~~~~GihP~~~~~~   69 (252)
T TIGR00010         1 LIDAHCHLDFLDFE--EDVEEVIERAKAAGVTAVVAVGT--D-----LEDFLRALELAEKYP--NVYAAVGVHPLDVDDD   69 (252)
T ss_pred             CEEeccCCCChhhc--cCHHHHHHHHHHcCCCEEEEecC--C-----HHHHHHHHHHHHHCC--CEEEEEEeCcchhhcC
Confidence            68999998743221  14556667778899999987752  1     223333333333222  222222332221    


Q ss_pred             -hhhHHHHHHHHH-cCCcEEEEe-ecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          176 -AYNASALEALLN-AGVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       176 -~~~~~~l~~l~~-~G~~~ik~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                       ....++++++++ .++.++.-. +.............+.+++.++.|+++|++|.+|+..
T Consensus        70 ~~~~~~~l~~~l~~~~~~~iGEiGld~~~~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~  130 (252)
T TIGR00010        70 TKEDIKELERLAAHPKVVAIGETGLDYYKADEYKRRQEEVFRAQLQLAEELNLPVIIHARD  130 (252)
T ss_pred             CHHHHHHHHHHccCCCEEEEEecccCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEecC
Confidence             233456666654 344455321 2211000000012478888899999999999999863

Several genomes have multiple paralogs related to this family. However, a set of 17 proteins can be found, one each from 17 of the first 20 genomes, such that each member forms a bidirectional best hit across genomes with all other members of the set. This core set (and one other near-perfect member), but not the other paralogs, form the seed for this model. Additionally, members of the seed alignment and all trusted hits, but not all paralogs, have a conserved motif DxHxH near the amino end. The member from E. coli was recently shown to have DNase activity.

>PRK10812 putative DNAse; Provisional

Probab=97.98  E-value=0.00026  Score=65.14  Aligned_cols=126  Identities=16%  Similarity=0.215  Sum_probs=71.8

Q ss_pred             eeecccccCCCCCC-CcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc--CceeEEeeeeeeCCCh
Q 015826          100 LIDVHAHLDDPGRT-EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLVPENA  176 (399)
Q Consensus       100 lID~H~H~~~~~~~-~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  176 (399)
                      +||+|+|+..+.+. ..++.......+...||..++..+       .+.+.....++.+...  .+..+|+|..... ..
T Consensus         3 ~iDtH~Hl~~~~~~~~~~d~~~vl~~a~~~gv~~~~~~~-------~~~~~~~~~~~l~~~~~~v~~~~GiHP~~~~-~~   74 (265)
T PRK10812          3 LVDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVA-------TTLPGYRHMRDLVGERDNVVFSCGVHPLNQD-EP   74 (265)
T ss_pred             eEEeccCCCCccchhhhcCHHHHHHHHHHcCCCEEEEeC-------CCHHHHHHHHHHHhhCCCeEEEEEeCCCCCC-Ch
Confidence            79999999753221 123555667778888998887554       1345555555555432  2223333332211 12


Q ss_pred             hhHHHHHHHHHc-CCcEE-EEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          177 YNASALEALLNA-GVLGL-KSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       177 ~~~~~l~~l~~~-G~~~i-k~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ...+++.++++. .+.+| .+.+.+.-.........+.+++.++.|+++|+|+.+|+++
T Consensus        75 ~~~~~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~e~~~Pv~iH~r~  133 (265)
T PRK10812         75 YDVEELRRLAAEEGVVAMGETGLDYYYTPETKVRQQESFRHHIQIGRELNKPVIVHTRD  133 (265)
T ss_pred             hHHHHHHHHhcCCCEEEEEeeecCcCCCCCCHHHHHHHHHHHHHHHHHhCCCeEEEeeC
Confidence            345666666643 34455 3333321000001124567889999999999999999965

>COG0084 TatD Mg-dependent DNase [DNA replication, recombination, and repair]

Probab=97.94  E-value=0.00044  Score=62.84  Aligned_cols=127  Identities=20%  Similarity=0.191  Sum_probs=72.7

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc--CceeEEeeeeee-CCCh
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLV-PENA  176 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~  176 (399)
                      |||+|+|+....+  .++.......+...||+-++..+.       +.+.+...++.+...  .+..+++|.... ....
T Consensus         3 liDtH~HL~~~~~--~~d~~~vi~~a~~~gv~~~~~~g~-------~~~~~~~~~~la~~y~~v~~~~G~HP~~~~~~~~   73 (256)
T COG0084           3 LIDTHCHLDFEEF--DEDRDEVIARAREAGVKKMVVVGT-------DLEDFKRALELAEKYPNVYAAVGVHPLDADEHSE   73 (256)
T ss_pred             cEEeeeCCCchhh--cCCHHHHHHHHHHcCCcEEEEeec-------CHHHHHHHHHHHHhCCCeEEEEeeCCCccccccH
Confidence            7999999986322  234455566778899999886651       234444445544433  233344333220 1113


Q ss_pred             hhHHHHHHHHHc--CCcEEEE-eecCCCCCC-CCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          177 YNASALEALLNA--GVLGLKS-FMCPSGIND-FPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       177 ~~~~~l~~l~~~--G~~~ik~-~~~~~~~~~-~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      +..+.+.++++.  .+..|.- .+.+.-... ......+.+++-++.|+++++|+.+|+++..
T Consensus        74 ~~~~~l~~~~~~~~~vvaIGEiGLDy~~~~~~~~~~Q~~~F~~ql~lA~~~~lPviIH~R~A~  136 (256)
T COG0084          74 EDLEELEQLAEHHPKVVAIGEIGLDYYWDKEPDKERQEEVFEAQLELAKELNLPVIIHTRDAH  136 (256)
T ss_pred             HHHHHHHHHHhcCCCeEEEEecccCccccccccHHHHHHHHHHHHHHHHHcCCCEEEEccccH
Confidence            456777777763  4444432 122110000 0001346788889999999999999998743

>PRK11449 putative deoxyribonuclease YjjV; Provisional

Probab=97.91  E-value=0.00031  Score=64.38  Aligned_cols=127  Identities=20%  Similarity=0.279  Sum_probs=70.1

Q ss_pred             cceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc--CceeEEeeeeeeCC-
Q 015826           98 PGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLVPE-  174 (399)
Q Consensus        98 PGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-  174 (399)
                      +.+||+|+|+....+  .++.......+...||+.++.+..       +.+.....++.....  .+..+|+|...... 
T Consensus         3 ~~~iD~HcHl~~~~~--~~~~~~~l~~a~~~gv~~~~~~~~-------~~~~~~~~~~l~~~~~~v~~~~GiHP~~~~~~   73 (258)
T PRK11449          3 CRFIDTHCHFDFPPF--SGDEEASLQRAAQAGVGKIIVPAT-------EAENFARVLALAERYQPLYAALGLHPGMLEKH   73 (258)
T ss_pred             ceEEEeccCCCChhh--ccCHHHHHHHHHHCCCCEEEEeeC-------CHHHHHHHHHHHHhCCCEEEEEeeCcCccccC
Confidence            458999999975332  234445566777889999886651       344445444444322  22333443322222 


Q ss_pred             ChhhHHHHHHHHHc---CCcEEEE-eecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          175 NAYNASALEALLNA---GVLGLKS-FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       175 ~~~~~~~l~~l~~~---G~~~ik~-~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .....+++.++++.   .+.+|.- .+.+...........+.+.+.++.|+++++||.+|+++
T Consensus        74 ~~~~~~~l~~~l~~~~~~~~aIGEiGLD~~~~~~~~~~Q~~vf~~ql~lA~~~~~Pv~iH~r~  136 (258)
T PRK11449         74 SDVSLDQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRR  136 (258)
T ss_pred             CHHHHHHHHHHHHhCCCCEEEEEecccCCCCCCCCHHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence            22345556655532   2334421 12211000000123467889999999999999999975

>PRK10425 DNase TatD; Provisional

Probab=97.88  E-value=0.00039  Score=63.66  Aligned_cols=125  Identities=13%  Similarity=0.096  Sum_probs=68.5

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC--ceeEEeeeeeeCC-Ch
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI--YVDVGFWGGLVPE-NA  176 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~  176 (399)
                      |||+|+|+....+  .++.......+...||..++..+.       +.+.....++......  +..+|+|...... ..
T Consensus         1 ~iDtH~HL~~~~~--~~d~~~vl~~a~~~gv~~~i~~~~-------~~~~~~~~~~l~~~~~~v~~~~GiHP~~~~~~~~   71 (258)
T PRK10425          1 MFDIGVNLTSSQF--AKDRDDVVARAFAAGVNGMLITGT-------NLRESQQAQKLARQYPSCWSTAGVHPHDSSQWQA   71 (258)
T ss_pred             CEEeeeCcCChhh--hccHHHHHHHHHHCCCCEEEEeCC-------CHHHHHHHHHHHHhCCCEEEEEEeCcCccccCCH
Confidence            6899999975332  245556677788889988875541       3445555555544322  2233333322111 12


Q ss_pred             hhHHHHHHHHHcC-CcEEE-EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          177 YNASALEALLNAG-VLGLK-SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       177 ~~~~~l~~l~~~G-~~~ik-~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      +..+.+.++.+.. +.+|. +.+.+...........+.+++.++.|+++++|+.+|+.+
T Consensus        72 ~~~~~l~~~~~~~~~vaIGEiGLDy~~~~~~~~~Q~~vF~~ql~lA~~~~~Pv~iH~r~  130 (258)
T PRK10425         72 ATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLAIAAELNMPVFMHCRD  130 (258)
T ss_pred             HHHHHHHHhccCCCEEEEeeeeeccccCCCCHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence            3345566655432 23332 222221000000112467888999999999999999974

>cd00530 PTE Phosphotriesterase (PTE) catalyzes the hydrolysis of organophosphate nerve agents, including the chemical warfare agents VX, soman, and sarin as well as the insecticide paraoxon

Probab=97.84  E-value=0.00095  Score=62.51  Aligned_cols=110  Identities=15%  Similarity=0.173  Sum_probs=66.1

Q ss_pred             CHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCc
Q 015826          209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA  288 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~  288 (399)
                      ..+.+++.++.|+++|+||++|+++...                               +...++++.++.+.    ...
T Consensus       134 q~~~f~~~~~lA~~~~~Pv~iH~~~~~~-------------------------------~~~~~l~~l~~~g~----~~~  178 (293)
T cd00530         134 EEKVLRAAARAQKETGVPISTHTQAGLT-------------------------------MGLEQLRILEEEGV----DPS  178 (293)
T ss_pred             HHHHHHHHHHHHHHHCCeEEEcCCCCcc-------------------------------ccHHHHHHHHHcCC----Chh
Confidence            4558889999999999999999975310                               01122233332210    122


Q ss_pred             eEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCcc--EEe
Q 015826          289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLS  366 (399)
Q Consensus       289 ~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id--~i~  366 (399)
                      ++.+.|.-.. .+.+.++++.+.|..+..+....+        ...+     .+|  .....+.++++++.|-.|  +++
T Consensus       179 ~~vi~H~~~~-~~~~~~~~~~~~G~~i~~~~~~~~--------~~~~-----~~~--~~~~~~~l~~~~~~~~~d~ill~  242 (293)
T cd00530         179 KVVIGHLDRN-DDPDYLLKIAALGAYLEFDGIGKD--------KIFG-----YPS--DETRADAVKALIDEGYGDRLLLS  242 (293)
T ss_pred             heEEeCCCCC-CCHHHHHHHHhCCCEEEeCCCCcc--------cccC-----CCC--HHHHHHHHHHHHHCCCcCCEEEe
Confidence            4578898632 356778888888865554432210        0000     111  233456789999999888  999


Q ss_pred             CCC
Q 015826          367 SDH  369 (399)
Q Consensus       367 sdh  369 (399)
                      ||-
T Consensus       243 TD~  245 (293)
T cd00530         243 HDV  245 (293)
T ss_pred             CCc
Confidence            994

PTE exists as a homodimer with one active site per monomer. The active site is located next to a binuclear metal center, at the C-terminal end of a TIM alpha- beta barrel motif. The native enzyme contains two zinc ions at the active site however these can be replaced with other metals such as cobalt, cadmium, nickel or manganese and the enzyme remains active.

>PF01026 TatD_DNase: TatD related DNase The Pfam entry finds members not in the Prosite definition

Probab=97.75  E-value=0.00035  Score=64.05  Aligned_cols=124  Identities=22%  Similarity=0.258  Sum_probs=67.4

Q ss_pred             eecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc---CceeEEeeeeeeCC-Ch
Q 015826          101 IDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR---IYVDVGFWGGLVPE-NA  176 (399)
Q Consensus       101 ID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~  176 (399)
                      ||+|+|+....+  .++.......+...|++.++.+..       ..+......+.....   ....+|+|...... ..
T Consensus         1 iD~H~Hl~~~~~--~~~~~~~~~~~~~~g~~~~i~~~~-------~~~~~~~~~~~~~~~~~~v~~~~GiHP~~~~~~~~   71 (255)
T PF01026_consen    1 IDAHCHLDSPRF--EEDRPEVLERAREAGVSAIIIVST-------DPEDWERVLELASQYPDRVYPALGIHPWEAHEVNE   71 (255)
T ss_dssp             EEEEE-TTSGGG--TTTHHHHHHHHHHTTEEEEEEEES-------SHHHHHHHHHHHHHTTTEEEEEE---GGGGGGHSH
T ss_pred             CcCccCCCChhh--CcCHHHHHHHHHHcCCCEEEEcCC-------CHHHhHHHHHHHhcCCCeEEEEecCCcchhhhhhH
Confidence            799999986221  234556678888999999986652       223444444333321   23333433322221 22


Q ss_pred             hhHHHHHHH--HH-cCCcEEE-EeecCCCC-CCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          177 YNASALEAL--LN-AGVLGLK-SFMCPSGI-NDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       177 ~~~~~l~~l--~~-~G~~~ik-~~~~~~~~-~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      +..+.++++  .+ ..+.+|. +.+.+... ........+.+++.++.|+++++|+.+|+.+
T Consensus        72 ~~~~~l~~l~~~~~~~~~aIGEiGLD~~~~~~~~~~~Q~~vF~~ql~lA~~~~~pv~iH~r~  133 (255)
T PF01026_consen   72 EDLEELEELINLNRPKVVAIGEIGLDYYWRNEEDKEVQEEVFERQLELAKELNLPVSIHCRK  133 (255)
T ss_dssp             HHHHHHHHHHHHTSTTEEEEEEEEEETTTTSSSGHHHHHHHHHHHHHHHHHHTCEEEEEEES
T ss_pred             HHHHHHHHHHHhccccceeeeeeccCcccccCCcHHHHHHHHHHHHHHHHHhCCcEEEecCC
Confidence            334566666  43 3344452 23333100 0001124567889999999999999999976

; InterPro: IPR001130 This family of proteins are related to a large superfamily of metalloenzymes []. TatD, a member of this family has been shown experimentally to be a DNase enzyme []. Allantoinase 3.5.2.5 from EC, N-isopropylammelide isopropyl amidohydrolase 3.5.1 from EC and the SCN1 protein from fission yeast belong to this family.; GO: 0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters; PDB: 3E2V_B 1XWY_A 3GUW_D 3RCM_A 1ZZM_A 2XIO_A 1J6O_A 2GZX_A 3IPW_A 2Y1H_A ....

>cd01311 PDC_hydrolase 2-pyrone-4,6-dicarboxylic acid (PDC) hydrolase hydrolyzes PDC to yield 4-oxalomesaconic acid (OMA) or its tautomer, 4-carboxy-2-hydroxymuconic acid (CHM)

Probab=97.53  E-value=0.0099  Score=54.73  Aligned_cols=122  Identities=18%  Similarity=0.168  Sum_probs=69.5

Q ss_pred             ceeecccccCCCCCC----------CcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEee
Q 015826           99 GLIDVHAHLDDPGRT----------EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW  168 (399)
Q Consensus        99 GlID~H~H~~~~~~~----------~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (399)
                      |.||+|.|+..+...          ..-+.......+-..||+..+-+..+..+ .. ...+.+..+.  ......+   
T Consensus         1 ~~iD~H~H~~~~~~~~~~~~~~~~~~~~~~e~l~~~m~~~gV~~aV~vq~~~~~-~~-n~~~~~~~~~--~~r~~g~---   73 (263)
T cd01311           1 GAVDAHMHVFDPGYPFPPAPEKFTPYDPGIDDLRALRSTLGIDRVVIVQASIYG-AD-NSNLLDALAS--NGKARGG---   73 (263)
T ss_pred             CCEEeeeeeeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCcEEEeCccccC-Cc-hHHHHHHHhh--CCCeEEE---
Confidence            679999999754321          01123333455557898887755422111 11 2222222221  1111111   


Q ss_pred             eeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          169 GGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       169 ~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ..+.+.. ...++++++.+.|+.|++......+     ..+++.+.+.++.+.++|+++.+|+..
T Consensus        74 ~~~~p~~-~~~~~l~~~~~~g~rGvRl~~~~~~-----~~~~~~~~~~~~~~~~~gl~v~~~~~~  132 (263)
T cd01311          74 ATVDPRT-TTDAELKEMHDAGVRGVRFNFLFGG-----VDNKDELDEIAKRAAELGWHVQVYFDA  132 (263)
T ss_pred             EEECCCC-CCHHHHHHHHHCCCeEEEEecccCC-----CCCHHHHHHHHHHHHHcCCEEEEEeCH
Confidence            1122222 2357788888899999997643321     237788899999999999999999853

This reaction is part of the protocatechuate (PCA) 4,5-cleavage pathway. PCA is one of the most important intermediate metabolites in the bacterial pathways for various phenolic compounds, including lignin, which is the most abundant aromatic material in nature.

>COG1099 Predicted metal-dependent hydrolases with the TIM-barrel fold [General function prediction only]

Probab=97.39  E-value=0.0079  Score=52.37  Aligned_cols=120  Identities=23%  Similarity=0.337  Sum_probs=66.2

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc-----------cCceeEEee
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-----------RIYVDVGFW  168 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~  168 (399)
                      +||+|+|++.-++       .-...+..+|+-+++.......| ..+.+.+....++...           +..+.++.+
T Consensus         2 ~iD~HiH~d~r~~-------eDlekMa~sGI~~Vit~AhdP~~-~~~~~v~~~h~~rl~~~E~~Ra~~~Gl~~~vavGvH   73 (254)
T COG1099           2 YIDSHIHLDVRGF-------EDLEKMALSGIREVITLAHDPYP-MKTAEVYLDHFRRLLGVEPERAEKAGLKLKVAVGVH   73 (254)
T ss_pred             ccccccccccccH-------HHHHHHHHhChhhhhhcccCCCC-cccHHHHHHHHHHHHccchhhHHhhCceeeEEeccC
Confidence            6999999986543       23456677888888876532222 2345555554443311           112233333


Q ss_pred             eeeeCC-ChhhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015826          169 GGLVPE-NAYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA  231 (399)
Q Consensus       169 ~~~~~~-~~~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~  231 (399)
                      ....+. -...+.+++++.. .++..|.-.    |.+...--..+.++.-+++|+++++|+.+|.
T Consensus        74 Pr~iP~e~~~~l~~L~~~l~~e~VvAiGEi----GLe~~t~~E~evf~~QL~LA~e~dvPviVHT  134 (254)
T COG1099          74 PRAIPPELEEVLEELEELLSNEDVVAIGEI----GLEEATDEEKEVFREQLELARELDVPVIVHT  134 (254)
T ss_pred             CCCCCchHHHHHHHHHhhcccCCeeEeeec----ccccCCHHHHHHHHHHHHHHHHcCCcEEEeC
Confidence            222222 2234556666654 455555321    1111111234567888999999999999996

>PRK09358 adenosine deaminase; Provisional

Probab=97.37  E-value=0.024  Score=54.28  Aligned_cols=26  Identities=15%  Similarity=0.027  Sum_probs=23.3

Q ss_pred             CCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          208 TNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       208 ~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .+.+.++++++.|+++|+++++|+..
T Consensus       179 ~~~~~~~~~~~~A~~~g~~~~~H~~E  204 (340)
T PRK09358        179 FPPSKFARAFDRARDAGLRLTAHAGE  204 (340)
T ss_pred             CCHHHHHHHHHHHHHCCCCeEEcCCC
Confidence            46789999999999999999999853

>PF00449 Urease_alpha: Urease alpha-subunit, N-terminal domain; InterPro: IPR011612 Urease (urea amidohydrolase, 3

Probab=97.34  E-value=0.00043  Score=53.29  Aligned_cols=36  Identities=22%  Similarity=0.376  Sum_probs=31.8

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEE   77 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~   77 (399)
                      ..|++|.|+.|+|..++..+||.|+||||+.||+..
T Consensus        65 ~lD~VItNa~IiD~~GI~KADIGIkdG~I~gIGkAG  100 (121)
T PF00449_consen   65 ALDLVITNALIIDYTGIVKADIGIKDGRIVGIGKAG  100 (121)
T ss_dssp             C-SEEEEEEEEEETTEEEEEEEEEETTEEEEEE-EB
T ss_pred             cccEEEeCcEEEecCCcEEeeEEeeCCEEEEEeccC
Confidence            469999999999998899999999999999999754

5.1.5 from EC) catalyses the hydrolysis of urea to form ammonia and carbamate. The subunit composition of urease from different sources varies [], but each holoenzyme consists of four structural domains []: three structural domains and a nickel-binding catalytic domain common to amidohydrolases []. Urease is unique among nickel metalloenzymes in that it catalyses a hydrolysis rather than a redox reaction. In Helicobacter pylori, the gamma and beta domains are fused and called the alpha subunit (IPR008223 from INTERPRO). The catalytic subunit (called beta or B) has the same organisation as the Klebsiella alpha subunit. Jack bean (Canavalia ensiformis) urease has a fused gamma-beta-alpha organisation (IPR008221 from INTERPRO). The N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit []. ; GO: 0009039 urease activity, 0016151 nickel ion binding, 0019627 urea metabolic process; PDB: 3LA4_A 2UBP_C 3UBP_C 1UBP_C 1S3T_C 1IE7_C 4UBP_C 1E9Y_B 1E9Z_B 3QGA_O ....

>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []

Probab=97.23  E-value=0.0025  Score=58.57  Aligned_cols=110  Identities=19%  Similarity=0.230  Sum_probs=65.8

Q ss_pred             ChhhHHHHHHHH-HcCCcEEEEeecCCCCCCCCCCCHHHH-HHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchh
Q 015826          175 NAYNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHI-KEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS  252 (399)
Q Consensus       175 ~~~~~~~l~~l~-~~G~~~ik~~~~~~~~~~~~~~~~~~l-~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~  252 (399)
                      ..+..+++++.+ +.|..|+|++....+   . ...+..+ ..+++.|+++|++|.+|+.......              
T Consensus        83 ~~~~~~~l~~~~~~~g~~Gv~l~~~~~~---~-~~~~~~~~~~~~~~~~~~~~pv~~H~g~~~~~~--------------  144 (273)
T PF04909_consen   83 PEDAVEELERALQELGFRGVKLHPDLGG---F-DPDDPRLDDPIFEAAEELGLPVLIHTGMTGFPD--------------  144 (273)
T ss_dssp             HHHHHHHHHHHHHTTTESEEEEESSETT---C-CTTSGHCHHHHHHHHHHHT-EEEEEESHTHHHH--------------
T ss_pred             chhHHHHHHHhccccceeeeEecCCCCc---c-ccccHHHHHHHHHHHHhhccceeeeccccchhh--------------
Confidence            345677788877 689999998754432   1 2233344 4999999999999999975110000              


Q ss_pred             hhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh----hHHHHHHHHHHHCCCCEEEEccc
Q 015826          253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA----SSSLDLLMEAKTNGDSITVETCP  321 (399)
Q Consensus       253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~----~~~l~~i~~ak~~G~~vt~e~~p  321 (399)
                               ..........+..++++      ++++++.+.|+...    .+.++++++.    -+++++++.
T Consensus       145 ---------~~~~~~~~~~~~~~~~~------~P~l~ii~~H~G~~~~~~~~~~~l~~~~----~nvy~d~s~  198 (273)
T PF04909_consen  145 ---------APSDPADPEELEELLER------FPDLRIILAHLGGPFPWWEEALRLLDRF----PNVYVDLSG  198 (273)
T ss_dssp             ---------HHHHHHHHHHHTTHHHH------STTSEEEESGGGTTHHHHHHHHHHHHHH----TTEEEECHS
T ss_pred             ---------hhHHHHHHHHHHHHHHH------hcCCeEEEecCcccchhHHHHHHHHHhC----Ccccccccc
Confidence                     00112233444556665      46899999998763    1233333333    368888765

The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....

>cd01320 ADA Adenosine deaminase (ADA) is a monomeric zinc dependent enzyme which catalyzes the irreversible hydrolytic deamination of both adenosine, as well as desoxyadenosine, to ammonia and inosine or desoxyinosine, respectively

Probab=97.20  E-value=0.035  Score=52.82  Aligned_cols=25  Identities=12%  Similarity=0.016  Sum_probs=22.9

Q ss_pred             CCHHHHHHHHHHHHhcCCCEEEecC
Q 015826          208 TNASHIKEGLSVLARYKRPLLVHAE  232 (399)
Q Consensus       208 ~~~~~l~~~~~~a~~~g~~v~~H~~  232 (399)
                      .+.++++.+++.|+++|+++.+|+.
T Consensus       170 ~~~~~~~~~~~~A~~~g~~v~~H~~  194 (325)
T cd01320         170 FPPEKFVRAFQRAREAGLRLTAHAG  194 (325)
T ss_pred             CCHHHHHHHHHHHHHCCCceEEeCC
Confidence            4788999999999999999999984

ADA plays an important role in the purine pathway. Low, as well as high levels of ADA activity have been linked to several diseases.

>PRK09875 putative hydrolase; Provisional

Probab=96.69  E-value=0.11  Score=48.29  Aligned_cols=104  Identities=16%  Similarity=0.250  Sum_probs=64.8

Q ss_pred             CHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCc
Q 015826          209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA  288 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~  288 (399)
                      ..+.++++.+.+++.|.|+.+|......                               +.. .++++++.       |+
T Consensus       137 E~kvl~Aaa~a~~~TG~pi~~Ht~~~~~-------------------------------g~e-~l~il~e~-------Gv  177 (292)
T PRK09875        137 EEKVFIAAALAHNQTGRPISTHTSFSTM-------------------------------GLE-QLALLQAH-------GV  177 (292)
T ss_pred             HHHHHHHHHHHHHHHCCcEEEcCCCccc-------------------------------hHH-HHHHHHHc-------Cc
Confidence            3457778888888999999999743211                               111 23445543       44


Q ss_pred             ---eEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhH-HHHHHHHhcCCcc-
Q 015826          289 ---HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANK-EKLWEALMDGHID-  363 (399)
Q Consensus       289 ---~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~-~~l~~~l~~G~id-  363 (399)
                         ++.|.|+... .+++.+++..++|..+-.++.-      .      + .+  .|    .+.| +.+...++.|-.| 
T Consensus       178 d~~rvvi~H~d~~-~d~~~~~~l~~~G~~l~fD~~g------~------~-~~--~p----d~~r~~~i~~L~~~Gy~dr  237 (292)
T PRK09875        178 DLSRVTVGHCDLK-DNLDNILKMIDLGAYVQFDTIG------K------N-SY--YP----DEKRIAMLHALRDRGLLNR  237 (292)
T ss_pred             CcceEEEeCCCCC-CCHHHHHHHHHcCCEEEeccCC------C------c-cc--CC----HHHHHHHHHHHHhcCCCCe
Confidence               7999999765 6788888888888876655211      0      1 01  12    2234 4555566777555 


Q ss_pred             -EEeCCCCC
Q 015826          364 -MLSSDHSP  371 (399)
Q Consensus       364 -~i~sdh~p  371 (399)
                       .+++|-..
T Consensus       238 ilLS~D~~~  246 (292)
T PRK09875        238 VMLSMDITR  246 (292)
T ss_pred             EEEeCCCCC
Confidence             77888643

>TIGR01430 aden_deam adenosine deaminase

Probab=96.64  E-value=0.18  Score=47.97  Aligned_cols=27  Identities=15%  Similarity=0.100  Sum_probs=23.7

Q ss_pred             CCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          207 MTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       207 ~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ..+.+.+.++++.|+++|+++++|+..
T Consensus       168 ~~~~~~~~~~~~~A~~~g~~i~~Ha~E  194 (324)
T TIGR01430       168 GGPPPDFVRAFAIARELGLHLTVHAGE  194 (324)
T ss_pred             CCCHHHHHHHHHHHHHCCCCeEEecCC
Confidence            346889999999999999999999853

This family includes the experimentally verified adenosine deaminases of mammals and E. coli. Other members of this family are predicted also to be adenosine deaminase, an enzyme of nucleotide degradation. This family is distantly related to AMP deaminase.

>PF02126 PTE: Phosphotriesterase family; InterPro: IPR001559 Synonym(s): Paraoxonase, A-esterase, Aryltriphosphatase, Phosphotriesterase, Paraoxon hydrolase Bacteria such as Brevundimonas diminuta (Pseudomonas diminuta) harbour a plasmid that carries the gene for Aryldialkylphosphatase (3

Probab=96.23  E-value=0.054  Score=50.89  Aligned_cols=221  Identities=19%  Similarity=0.208  Sum_probs=106.8

Q ss_pred             ceeecccccCCC--CC-----CCcC----c---hHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCcee
Q 015826           99 GLIDVHAHLDDP--GR-----TEWE----G---FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD  164 (399)
Q Consensus        99 GlID~H~H~~~~--~~-----~~~e----~---~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (399)
                      |+..+|=|+...  +.     ..++    +   .....+...+.|+.|++|+. +. ....+.+.+++.-+...-...+.
T Consensus         7 G~tl~HEHl~~d~~~~~~~~~~~~~~~~~~~~~~~~El~~~k~~Gg~tiVd~T-~~-g~GRd~~~l~~is~~tGv~II~~   84 (308)
T PF02126_consen    7 GFTLMHEHLLIDLSGFYKDPDEALDDRDEDVEAAVAELKEFKAAGGRTIVDAT-PI-GLGRDVEALREISRRTGVNIIAS   84 (308)
T ss_dssp             SSEEEEEESEEETTTHHHHTGGGGCGHHHHHHHHHHHHHHHHHTTEEEEEE---SG-GGTB-HHHHHHHHHHHT-EEEEE
T ss_pred             CCeecccCeeecChhhccCCCcchhhhhhhHHHHHHHHHHHHHcCCCEEEecC-Cc-ccCcCHHHHHHHHHHhCCeEEEe
Confidence            778888888532  11     1112    1   22234556688999999986 11 22334555554433322122222


Q ss_pred             EEeeeee-eCCC--hhhHHHHHHH----HHcCCc-------EEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015826          165 VGFWGGL-VPEN--AYNASALEAL----LNAGVL-------GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVH  230 (399)
Q Consensus       165 ~~~~~~~-~~~~--~~~~~~l~~l----~~~G~~-------~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H  230 (399)
                      -+++... .+..  ....+++.++    +..|+.       .||...+..   .........++++..+.++.|+++++|
T Consensus        85 TG~y~~~~~p~~~~~~s~e~la~~~i~Ei~~GidgT~ikaG~Ik~~~~~~---~it~~E~k~lrAaa~A~~~TG~pI~~H  161 (308)
T PF02126_consen   85 TGFYKEPFYPEWVREASVEELADLFIREIEEGIDGTGIKAGIIKEIGSSN---PITPLEEKVLRAAARAHKETGAPISTH  161 (308)
T ss_dssp             EEE-SGGCSCHHHHTSHHHHHHHHHHHHHHT-STTSSB-ESEEEEEEBTT---BCEHHHHHHHHHHHHHHHHHT-EEEEE
T ss_pred             CCCCccccCChhhhcCCHHHHHHHHHHHHHhcCCCCccchhheeEeeccC---CCCHHHHHHHHHHHHHHHHhCCeEEEc
Confidence            2333210 1100  0122333333    234544       345543331   111123456778888888899999999


Q ss_pred             cCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHH
Q 015826          231 AEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKT  310 (399)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~  310 (399)
                      ++.....                              + .+.+++.++.+.    .--++.++|+... .+++.+++.-+
T Consensus       162 ~~~g~~~------------------------------~-~e~~~il~e~Gv----~~~rvvigH~D~~-~D~~y~~~la~  205 (308)
T PF02126_consen  162 TGRGTRM------------------------------G-LEQLDILEEEGV----DPSRVVIGHMDRN-PDLDYHRELAD  205 (308)
T ss_dssp             ESTTGTC------------------------------H-HHHHHHHHHTT------GGGEEETSGGGS-T-HHHHHHHHH
T ss_pred             CCCCCcC------------------------------H-HHHHHHHHHcCC----ChhHeEEeCCCCC-CCHHHHHHHHh
Confidence            8543210                              1 112233333210    1236899999876 78889999888


Q ss_pred             CCCCEEEEccccccccccccCCCCCcceEEcCC--CCChhhH-HHHHHHHhcCCcc--EEeCCCCC
Q 015826          311 NGDSITVETCPHYLAFSAEEIPDGDTRFKCAPP--IRDAANK-EKLWEALMDGHID--MLSSDHSP  371 (399)
Q Consensus       311 ~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pp--lr~~~~~-~~l~~~l~~G~id--~i~sdh~p  371 (399)
                      +|..+..|..-+.++.       ..    .+|.  ..+.+.| +.|.+.+++|-.|  .++.|-+.
T Consensus       206 ~G~~l~~D~~g~~~~g-------~~----~~~~~~~~~d~~ri~~l~~L~~~Gy~~qIlLS~D~~~  260 (308)
T PF02126_consen  206 RGVYLEFDTIGREFSG-------KD----KNPRVGYPPDEERIELLKELIEEGYADQILLSHDIGR  260 (308)
T ss_dssp             TT-EEEETTTT-B-TT-------TT----TCHSCTTS-HHHHHHHHHHHHHTTTGGGEEE-HHHES
T ss_pred             cCCEEEecCCcccccC-------cc----cCccCCCCCHHHHHHHHHHHHHcCCcCcEEEeccccc
Confidence            9988877765432210       00    0111  1233344 5677778889887  66777544

1.8.1 from EC) (PTE) (also known as parathion hydrolase). This enzyme has attracted interest because of its potential use in the detoxification of chemical waste and warfare agents and its ability to degrade agricultural pesticides such as parathion. It acts specifically on synthetic organophosphate triesters and phosphorofluoridates. It does not seem to have a natural occuring substrate and may thus have optimally evolved for utilizing paraoxon. Aryldialkylphosphatase belongs to a family [, ] of enzymes that possess a binuclear zinc metal centre at their active site. The two zinc ions are coordinated by six different residues, six of which being histidines. This family so far includes, in addition to the parathion hydrolase, the following proteins: Escherichia coli protein Php, the substrate of which is not yet known. Mycobacterium tuberculosis phosphotriesterase homology protein Rv0230C. Mammalian phosphotriesterase related protein (PTER) (RPR-1). ; GO: 0008270 zinc ion binding, 0016788 hydrolase activity, acting on ester bonds, 0009056 catabolic process; PDB: 3MSR_A 3OVG_D 3K2G_C 1BF6_B 3OQE_A 3C86_A 3SO7_A 2D2G_A 2R1P_A 2D2H_A ....

>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]

Probab=95.86  E-value=0.67  Score=43.33  Aligned_cols=110  Identities=15%  Similarity=0.184  Sum_probs=65.9

Q ss_pred             hHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcC
Q 015826          178 NASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTY  256 (399)
Q Consensus       178 ~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (399)
                      ..+++++.++ .|..++++.....+    ...+++.+..+++.|.++|+|+.+|........          +..   .+
T Consensus       114 a~~E~er~v~~~gf~g~~l~p~~~~----~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~----------~~~---~~  176 (293)
T COG2159         114 AAEELERRVRELGFVGVKLHPVAQG----FYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGA----------GLE---KG  176 (293)
T ss_pred             HHHHHHHHHHhcCceEEEecccccC----CCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCc----------ccc---cC
Confidence            5678888876 58889887533321    234566789999999999999999986543200          000   00


Q ss_pred             CCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCC--ChhHHHHHHHHHHHCCCCEEEEccc
Q 015826          257 LKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS--DASSSLDLLMEAKTNGDSITVETCP  321 (399)
Q Consensus       257 ~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s--~~~~~l~~i~~ak~~G~~vt~e~~p  321 (399)
                       .+.|...        -.++++      ++..++.+.|+.  -. --.+.+..++ ..-+++.+++-
T Consensus       177 -~~~p~~~--------~~va~~------fP~l~IVl~H~G~~~p-~~~~a~~~a~-~~~nvy~d~s~  226 (293)
T COG2159         177 -HSDPLYL--------DDVARK------FPELKIVLGHMGEDYP-WELEAIELAY-AHPNVYLDTSG  226 (293)
T ss_pred             -CCCchHH--------HHHHHH------CCCCcEEEEecCCCCc-hhHHHHHHHH-hCCCceeeeec
Confidence             1233222        234554      468999999997  43 2334444442 23456666544

>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]

Probab=95.85  E-value=0.069  Score=52.29  Aligned_cols=185  Identities=22%  Similarity=0.214  Sum_probs=92.9

Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC-ceeEEeee---e---eeCCChhhHHHHHHHH----HcCC
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YVDVGFWG---G---LVPENAYNASALEALL----NAGV  190 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~---~~~~~~~~~~~l~~l~----~~G~  190 (399)
                      ...+.+.|+||+.++. .  ......+.+..+.+...... .+++..+.   +   +.++.......+.+..    ..|.
T Consensus       136 ~~~~~a~GiTt~~d~~-~--~~~~~~~~~~~~~~l~~~~~l~~rv~~~~~~~~vk~~~dg~~~~~~a~~~~~~~~~~~g~  212 (404)
T PF07969_consen  136 AMAAGAYGITTVLDYG-G--GFASDPEDLEALRELAAEGGLPLRVHLYPRIGGVKIFADGSPGGRTALLEEPYYADEPGA  212 (404)
T ss_dssp             HHHHCHTCEEEETTCE-C--CCGEHHHHHHHHHHHHHCTC--SEEEEEEEEEEEEEESSSSTTHHHHHHHHHHHHHHHTS
T ss_pred             HHHhcCCCeEEecCCc-c--ccCCCHHHHHHHHHHhhhcCCCeeeeeecccCceeeccccccccchhhhccccccCcccc
Confidence            3445689999999987 1  22334556666555544322 23333221   1   1233222222222221    2232


Q ss_pred             cEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHH
Q 015826          191 LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIR  270 (399)
Q Consensus       191 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~  270 (399)
                      . ...       .+.+..+++++.++++.|++.|+.+.+|+....                                ++.
T Consensus       213 ~-~~~-------~g~~~~~~~~l~~~v~~a~~~g~~v~vHa~gd~--------------------------------a~~  252 (404)
T PF07969_consen  213 P-VHI-------SGLPSFDPEELEELVRAAREAGLQVAVHAIGDR--------------------------------AID  252 (404)
T ss_dssp             E-EEE-------TC--SSSHHHHHHHHHHHHHCT-EEEEEEESHH--------------------------------HHH
T ss_pred             c-ccc-------cccccccchhHHHHHHHHHhcCCeeEEEEcCCc--------------------------------hHH
Confidence            1 111       123457888899999999999999999994432                                233


Q ss_pred             HHHHHHhhhccCCCCCCceEEEEcCC--ChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCC--
Q 015826          271 ELLTVAKDTRTDGPAEGAHLHIVHLS--DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD--  346 (399)
Q Consensus       271 ~~~~~a~~~~~~~~~~g~~vhi~H~s--~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~--  346 (399)
                      .++...++.       .....+.|..  +. +.++.+++.     .+.+++.|+++.......        ..+.+..  
T Consensus       253 ~~l~a~~~~-------~~~~~i~h~~~~~~-~~~~~~~~l-----~~~~~~~p~~~~~~~~~~--------~~~~~~~~~  311 (404)
T PF07969_consen  253 EALDAIEAA-------RARGRIEHAELIDP-DDIERMAEL-----GVTASVQPHFLFSWGGEW--------YEERLGPER  311 (404)
T ss_dssp             HHHHHHHHH-------TCCHEEEEHCBCCH-HHHHHHHHH-----TTEEEECCTHHHHETEET--------HHHHHHHHC
T ss_pred             hHHHHHHhh-------cccceeeccccCCH-HHHHHHHHh-----CCccccChhHhhhccchh--------hhhhhhhHH
Confidence            333333322       1111456654  33 455555444     467788886665443100        0000000  


Q ss_pred             hhhHHHHHHHHhcCCccEEeCCCC
Q 015826          347 AANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       347 ~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                      ......+...++.|...+++||+.
T Consensus       312 ~~~~~~~~~~~~~Gv~v~~gsD~p  335 (404)
T PF07969_consen  312 ARRIYPIRSLLDAGVRVALGSDAP  335 (404)
T ss_dssp             GGGBTHHHHHHHCTTEEEE--TTT
T ss_pred             HHHHhHHHHHHhccCceecCcCCc
Confidence            011145677788999999999974

Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....

>COG1735 Php Predicted metal-dependent hydrolase with the TIM-barrel fold [General function prediction only]

Probab=94.82  E-value=1.9  Score=39.80  Aligned_cols=74  Identities=11%  Similarity=0.224  Sum_probs=48.0

Q ss_pred             CHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCc
Q 015826          209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA  288 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~  288 (399)
                      ....|+++.+..++.|.|+++|.+-...                               +.+.+--+..+    + ..=.
T Consensus       150 Eek~lrAaA~A~~~Tg~Pi~tHt~~gt~-------------------------------g~eq~~il~~e----g-vdl~  193 (316)
T COG1735         150 EEKSLRAAARAHKETGAPISTHTPAGTM-------------------------------GLEQLRILAEE----G-VDLR  193 (316)
T ss_pred             HHHHHHHHHHHhhhcCCCeEEeccchhh-------------------------------hHHHHHHHHHc----C-CChh
Confidence            3456777777778899999999864321                               11211122222    0 0123


Q ss_pred             eEEEEcCC-ChhHHHHHHHHHHHCCCCEEEEc
Q 015826          289 HLHIVHLS-DASSSLDLLMEAKTNGDSITVET  319 (399)
Q Consensus       289 ~vhi~H~s-~~~~~l~~i~~ak~~G~~vt~e~  319 (399)
                      ++.++|+. +. ..+...+.++.+|.-+..|.
T Consensus       194 ~v~igH~d~n~-dd~~y~~~l~~~Ga~l~fD~  224 (316)
T COG1735         194 KVSIGHMDPNT-DDVYYQKKLADRGAFLEFDR  224 (316)
T ss_pred             HeeEeccCCCC-ChHHHHHHHHhcCceEEecc
Confidence            58999998 66 78999999999998665553

>PF07969 Amidohydro_3: Amidohydrolase family; InterPro: IPR013108 Amidohydrolases are a diverse superfamily of enzymes which catalyse the hydrolysis of amide or amine bonds in a large number of different substrates including urea, cytosine, AMP, formylmethanofuran, etc [, ]

Probab=91.83  E-value=0.061  Score=52.69  Aligned_cols=15  Identities=60%  Similarity=1.179  Sum_probs=12.4

Q ss_pred             EEecceeecccccCC
Q 015826           95 VIMPGLIDVHAHLDD  109 (399)
Q Consensus        95 ~vlPGlID~H~H~~~  109 (399)
                      +|+|||||+|+|+..
T Consensus         1 ~v~PGfiD~H~H~~~   15 (404)
T PF07969_consen    1 TVMPGFIDSHTHLDS   15 (404)
T ss_dssp             EEEE-EEEEEEEHTT
T ss_pred             CCccChhHHhhChHH
Confidence            689999999999864

Also included in this superfamily are the phopshotriesterase enzymes, which hydrolyse P-O bonds. Members participate in a large number of processes including nucleotide metabolism, detoxification and neuronal development. They use a variety of divalent metal cofactors for catalysis: for example adenosine deaminase binds a single zinc ion, phopsphotriesterase binds two, while urease binds nickel. It has been postulated that since some of these proteins, such as those some of those involved in neuronal devlopment, appear to have lost their metal-binding centres, their function may simply be to bind, but not hydrolyse, their target molecules. This entry represents a subset of amidohydrolase domains that participate in different functions including cytosine degradation, atrazine degradation and other metabolic processes. The structure of the domain from Escherichia coli has been studied, and like other amidohydrolases it forms a classical alpha-beta TIM-barrel fold []. The active site is located in the mouth of the enzyme barrel and contains a bound iron ion that coordinates a hydroxyl nucleophile. Substrate binding involves a significant conformational change that sequesters the reaction complex from solvent.; PDB: 4F0R_A 4F0S_A 1V4Y_A 1M7J_A 1RK5_A 1RJP_A 1RJR_A 1RJQ_A 1RK6_A 1V51_A ....

>COG1831 Predicted metal-dependent hydrolase (urease superfamily) [General function prediction only]

Probab=91.41  E-value=11  Score=34.28  Aligned_cols=27  Identities=7%  Similarity=0.119  Sum_probs=23.4

Q ss_pred             CHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          209 NASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      +.+.|..+++.|+..|++|+.|.++.+
T Consensus       143 ~n~vl~~a~elA~dvdc~vqLHtes~~  169 (285)
T COG1831         143 SNEVLEYAMELAKDVDCAVQLHTESLD  169 (285)
T ss_pred             HHHHHHHHHHHhhcCCCcEEEecCCCC
Confidence            456788899999999999999998754

>TIGR01496 DHPS dihydropteroate synthase

Probab=91.37  E-value=3.3  Score=37.87  Aligned_cols=67  Identities=9%  Similarity=0.010  Sum_probs=46.8

Q ss_pred             hhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCC-HHH---HHHHHHHHHhc-CCCEEEecCChhhchhHHhh
Q 015826          176 AYNASALEALLNAGVLGLKSFMCPSGINDFPMTN-ASH---IKEGLSVLARY-KRPLLVHAEMEKGSERHVKL  243 (399)
Q Consensus       176 ~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~-~~~---l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~  243 (399)
                      .+.++..++++++|+.-|.+...... ++....+ .++   +..+++.+++. ++++.+|..+++.++..++.
T Consensus        23 ~~~~~~a~~~~~~GA~iIDIG~~st~-p~~~~i~~~~E~~rl~~~v~~~~~~~~~plsiDT~~~~vi~~al~~   94 (257)
T TIGR01496        23 DKAVAHAERMLEEGADIIDVGGESTR-PGADRVSPEEELNRVVPVIKALRDQPDVPISVDTYRAEVARAALEA   94 (257)
T ss_pred             HHHHHHHHHHHHCCCCEEEECCCCCC-CCCCCCCHHHHHHHHHHHHHHHHhcCCCeEEEeCCCHHHHHHHHHc
Confidence            34567778888999999988432111 1122233 335   77778888876 99999999999988877765

This model represents dihydropteroate synthase, the enzyme that catalyzes the second to last step in folic acid biosynthesis. The gene is usually designated folP (folic acid biosynthsis) or sul (sulfanilamide resistance). This model represents one branch of the family of pterin-binding enzymes (pfam00809) and of a cluster of dihydropteroate synthase and related enzymes (COG0294). Other members of pfam00809 and COG0294 are represented by TIGR00284.

>COG3618 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]

Probab=90.87  E-value=5.2  Score=36.69  Aligned_cols=27  Identities=11%  Similarity=0.107  Sum_probs=22.2

Q ss_pred             CCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          208 TNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       208 ~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      +..+.+++.++..+++|+.+.++....
T Consensus       121 ~~a~~~r~~~~rL~~~gl~fdl~~~~~  147 (279)
T COG3618         121 FEAPAWRANVERLAKLGLHFDLQVDPH  147 (279)
T ss_pred             hhhHHHHHHHHHHHhcCCeEEEEeChh
Confidence            444789999999999999999887543

>PRK01060 endonuclease IV; Provisional

Probab=90.29  E-value=13  Score=34.17  Aligned_cols=119  Identities=18%  Similarity=0.138  Sum_probs=72.7

Q ss_pred             hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCC---EEEecCChhhchhHHhhccCcCCchhhh
Q 015826          178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP---LLVHAEMEKGSERHVKLEDDTLDTRSYS  254 (399)
Q Consensus       178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~---v~~H~~~~~~~~~~~~~~~~~~~~~~~~  254 (399)
                      ..+.++.+.+.|.+++.++...+..-..+..+++.++++.+.++++|+.   +.+|+...-..                 
T Consensus        14 ~~~~l~~~~~~G~d~vEl~~~~p~~~~~~~~~~~~~~~lk~~~~~~gl~~~~~~~h~~~~~nl-----------------   76 (281)
T PRK01060         14 LEGAVAEAAEIGANAFMIFTGNPQQWKRKPLEELNIEAFKAACEKYGISPEDILVHAPYLINL-----------------   76 (281)
T ss_pred             HHHHHHHHHHcCCCEEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCCCCceEEecceEecC-----------------
Confidence            3456777778999999987654321112245888899999999999998   88887421100                 


Q ss_pred             cCCCCCChH--HHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCC------hhHHH----HHHHHH--HHCCCCEEEEcc
Q 015826          255 TYLKTRPPS--WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD------ASSSL----DLLMEA--KTNGDSITVETC  320 (399)
Q Consensus       255 ~~~~~~p~~--~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~------~~~~l----~~i~~a--k~~G~~vt~e~~  320 (399)
                        ....|..  .....+++.+++|++.       |++..+.|...      .++.+    +.++++  .+.|+.+..|..
T Consensus        77 --~~~d~~~r~~s~~~~~~~i~~A~~l-------ga~~vv~h~G~~~~~~~~~~~~~~~~e~l~~l~~~~~gv~l~iEn~  147 (281)
T PRK01060         77 --GNPNKEILEKSRDFLIQEIERCAAL-------GAKLLVFHPGSHLGDIDEEDCLARIAESLNEALDKTQGVTIVLENT  147 (281)
T ss_pred             --CCCCHHHHHHHHHHHHHHHHHHHHc-------CCCEEEEcCCcCCCCCcHHHHHHHHHHHHHHHHhcCCCCEEEEecC
Confidence              0001111  1234577788888875       77777777542      10122    233333  346888999987


Q ss_pred             cc
Q 015826          321 PH  322 (399)
Q Consensus       321 p~  322 (399)
                      |.
T Consensus       148 ~~  149 (281)
T PRK01060        148 AG  149 (281)
T ss_pred             CC
Confidence            64

>cd01308 Isoaspartyl-dipeptidase Isoaspartyl dipeptidase hydrolyzes the beta-L-isoaspartyl linkages in dipeptides, as part of the degradative pathway to eliminate proteins with beta-L-isoaspartyl peptide bonds, bonds whereby the beta-group of an aspartate forms the peptide link with the amino group of the following amino acid

Probab=90.22  E-value=15  Score=35.70  Aligned_cols=104  Identities=22%  Similarity=0.198  Sum_probs=67.4

Q ss_pred             CCCChHHHHHHHHHHHHHHhhhccCCCCCCceEE--EEcCC-ChhHHHHHHHHHHHC-CCCEEEEccccccccccccCCC
Q 015826          258 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLH--IVHLS-DASSSLDLLMEAKTN-GDSITVETCPHYLAFSAEEIPD  333 (399)
Q Consensus       258 ~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vh--i~H~s-~~~~~l~~i~~ak~~-G~~vt~e~~p~~L~~~~~~~~~  333 (399)
                      .++|...+...+.+....+...       +++.+  ..|++ .. ..++.+.+.+++ |++++ ++|++|+.++.+.+..
T Consensus       163 ~~~~~~~~~~~~~~~a~~~~~~-------~~~~~~~~vh~~~~~-~~~~~i~~~~~~~G~~~~-~~~~~~~~~~~~~~~~  233 (387)
T cd01308         163 SSQPTVEELARIAAEARVGGLL-------GGKAGIVHIHLGDGK-RALSPIFELIEETEIPIT-QFLPTHINRTAPLFEQ  233 (387)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHh-------cCCCcEEEEEeCCch-HHHHHHHHHHHhcCCCcc-eeECCcccCCHHHHHH
Confidence            3566777766666666655533       33333  33444 33 677777665554 99999 9999999988773211


Q ss_pred             ------CCc----ceEEcCCCCChh---hHHHHHHHHhcCCc-c--EEeCCCC
Q 015826          334 ------GDT----RFKCAPPIRDAA---NKEKLWEALMDGHI-D--MLSSDHS  370 (399)
Q Consensus       334 ------~~~----~~~~~Pplr~~~---~~~~l~~~l~~G~i-d--~i~sdh~  370 (399)
                            .|.    ..++.||+++..   ..+.+|++++.|.. |  +++|||.
T Consensus       234 ~~~~~~~G~~v~i~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~d~i~l~TD~~  286 (387)
T cd01308         234 GVEFAKMGGTIDLTSSIDPQFRKEGEVRPSEALKRLLEQGVPLERITFSSDGN  286 (387)
T ss_pred             HHHHHHcCCcEEEECCCCccccccCccChHHHHHHHHHhCCCCCcEEEEECCC
Confidence                  222    245577766543   56888999999864 3  9999996

Formation of this bond is a spontaneous nonenzymatic reaction in nature and can profoundly effect the function of the protein. Isoaspartyl dipeptidase is an octameric enzyme that contains a binuclear zinc center in the active site of each subunit and shows a strong preference of hydrolyzing Asp-Leu dipeptides.

>PF00962 A_deaminase: Adenosine/AMP deaminase immunodeficiency disease (SCID); InterPro: IPR001365 Adenosine deaminase (3

Probab=89.99  E-value=4.2  Score=38.59  Aligned_cols=102  Identities=22%  Similarity=0.231  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceE
Q 015826          211 SHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHL  290 (399)
Q Consensus       211 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~v  290 (399)
                      ..+..+++.|++.|+++.+|+.+...                             ...+..++...          |.. 
T Consensus       180 ~~~~~~~~~a~~~gl~~t~HaGE~~~-----------------------------~~~~~~ai~~l----------~~~-  219 (331)
T PF00962_consen  180 LKFAPAFRKAREAGLKLTVHAGETGG-----------------------------PEHIRDAILLL----------GAD-  219 (331)
T ss_dssp             GGHHHHHHHHHHTT-EEEEEESSSST-----------------------------HHHHHHHHHTS----------T-S-
T ss_pred             HHHHHHHhhhcccceeecceecccCC-----------------------------cccccchhhhc----------cce-
Confidence            34888999999999999999943211                             01233333331          111 


Q ss_pred             EEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCC
Q 015826          291 HIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDH  369 (399)
Q Consensus       291 hi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh  369 (399)
                      -|.|.....+.-++++..+++  +|.+|+||..=... ..          .+.++    .=.+.+.++.|..-+|+||-
T Consensus       220 RIgHG~~~~~~p~l~~~~~~~--~I~iEvcptSN~~~-~~----------~~~~~----~hP~~~~~~~gv~v~i~TDd  281 (331)
T PF00962_consen  220 RIGHGVRLIKDPELLELLAER--QIPIEVCPTSNVQL-GA----------VPSYE----EHPLRKLLDAGVPVSINTDD  281 (331)
T ss_dssp             EEEE-GGGGGSHHHHHHHHHT--T-EEEE-HHHHHHT-TS----------SSTGG----G-CHHHHHHTT-EEEE--BS
T ss_pred             eecchhhhhhhhHHHHHHHHh--CCCeeeCCCcCccc-ce----------eeecc----hhHHHHHHHcCCceeccCCC
Confidence            477765321344566666666  57888898520000 00          11111    11256677889999999996

5.4.4 from EC) catalyzes the hydrolytic deamination of adenosine into inosine and AMP deaminase (3.5.4.6 from EC) catalyzes the hydrolytic deamination of AMP into IMP. It has been shown [] that these two enzymes share three regions of sequence similarities; these regions are centred on residues which are proposed to play an important role in the catalytic mechanism of these two enzymes.; GO: 0019239 deaminase activity, 0009168 purine ribonucleoside monophosphate biosynthetic process; PDB: 3LGG_B 3LGD_B 2AMX_B 3EWD_A 2QVN_A 2PGF_A 2PGR_A 3EWC_A 1W1I_G 1O5R_A ....

>PRK13352 thiamine biosynthesis protein ThiC; Provisional

Probab=89.55  E-value=14  Score=35.73  Aligned_cols=53  Identities=21%  Similarity=0.237  Sum_probs=33.4

Q ss_pred             HHHHHHHHHhhhccCCCCCCceEEEEcCC---------Ch------hHHHHHHHHHHHCCCCEEEEcccccccccc
Q 015826          268 AIRELLTVAKDTRTDGPAEGAHLHIVHLS---------DA------SSSLDLLMEAKTNGDSITVETCPHYLAFSA  328 (399)
Q Consensus       268 ~v~~~~~~a~~~~~~~~~~g~~vhi~H~s---------~~------~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~  328 (399)
                      ...+++++++++       ++-+.+.-.-         ..      -.--++.++|+++|+.+..| -|.|.-++.
T Consensus       207 ~fD~lLeI~~~y-------DVtlSLGDglRPG~i~Da~D~aQi~El~~lgeL~~RA~e~gVQvMVE-GPGHvPl~~  274 (431)
T PRK13352        207 HFDYLLEILKEY-------DVTLSLGDGLRPGCIADATDRAQIQELITLGELVKRAREAGVQVMVE-GPGHVPLDQ  274 (431)
T ss_pred             HHHHHHHHHHHh-------CeeeeccCCcCCCccccCCcHHHHHHHHHHHHHHHHHHHcCCeEEEE-CCCCCCHHH
Confidence            467888888876       4444333321         11      01235667788999999999 588877663

>smart00518 AP2Ec AP endonuclease family 2

Probab=89.52  E-value=17  Score=33.35  Aligned_cols=118  Identities=14%  Similarity=0.085  Sum_probs=71.9

Q ss_pred             HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCC
Q 015826          179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLK  258 (399)
Q Consensus       179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (399)
                      ...++++.+.|..++.+++..+.....+..+.+.++++.+.++++|+.+.+|+.....             +      ..
T Consensus        13 ~~~~~~~~~~G~~~vel~~~~~~~~~~~~~~~~~~~~l~~~~~~~gl~ls~h~p~~~n-------------l------~s   73 (273)
T smart00518       13 YKAFIEAVDIGARSFQLFLGNPRSWKGVRLSEETAEKFKEALKENNIDVSVHAPYLIN-------------L------AS   73 (273)
T ss_pred             hHHHHHHHHcCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHcCCCEEEECCceec-------------C------CC
Confidence            3567888889999998876654221112467888999999999999999999732100             0      00


Q ss_pred             CCChH--HHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCC-----hhHH----HHHHHHHH--HCCCCEEEEcccc
Q 015826          259 TRPPS--WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD-----ASSS----LDLLMEAK--TNGDSITVETCPH  322 (399)
Q Consensus       259 ~~p~~--~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~-----~~~~----l~~i~~ak--~~G~~vt~e~~p~  322 (399)
                      ..|..  .....+++.+++|++.       |++..+.|...     .++.    .+.+++.-  +.|+.+..|..+.
T Consensus        74 ~d~~~r~~~~~~l~~~i~~A~~l-------Ga~~vv~h~g~~~~~~~e~~~~~~~~~l~~l~~~~~gv~l~lEn~~~  143 (273)
T smart00518       74 PDKEKVEKSIERLIDEIKRCEEL-------GIKALVFHPGSYLKQSKEEALNRIIESLNEVIDETKGVVILLETTAG  143 (273)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHc-------CCCEEEEccccccCCCHHHHHHHHHHHHHHHHhccCCcEEEEeccCC
Confidence            11111  1234577788888875       77766777632     1122    22333322  4688888887654

These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites

>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]

Probab=89.18  E-value=5.5  Score=38.14  Aligned_cols=53  Identities=13%  Similarity=-0.026  Sum_probs=36.5

Q ss_pred             hhHHHHHHHHHcCCcEEEEeec-CCCCCCCCCCCHHHHHHHHHHHHhcCCCEEE
Q 015826          177 YNASALEALLNAGVLGLKSFMC-PSGINDFPMTNASHIKEGLSVLARYKRPLLV  229 (399)
Q Consensus       177 ~~~~~l~~l~~~G~~~ik~~~~-~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~  229 (399)
                      ...+.++.+++.|++.+-+... .........++.+++++++++|+++|+.+.+
T Consensus        14 g~l~~l~~ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gkk~~V   67 (347)
T COG0826          14 GNLEDLKAAIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGKKVYV   67 (347)
T ss_pred             CCHHHHHHHHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCCeEEE
Confidence            3567888888999887644321 1111122357889999999999999996654

>cd00443 ADA_AMPD Adenosine/AMP deaminase

Probab=86.77  E-value=28  Score=32.70  Aligned_cols=25  Identities=12%  Similarity=-0.017  Sum_probs=21.9

Q ss_pred             CHHHHHHHHHHHHhcC-CCEEEecCC
Q 015826          209 NASHIKEGLSVLARYK-RPLLVHAEM  233 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g-~~v~~H~~~  233 (399)
                      +...+..+++.|++.| +++.+|+..
T Consensus       151 ~~~~f~~~~~~ar~~g~l~~t~HaGE  176 (305)
T cd00443         151 PLRDFYSYYEYARRLGLLGLTLHCGE  176 (305)
T ss_pred             CHHHHHHHHHHHHHcCCcceEEeecC
Confidence            5678899999999999 999999853

Adenosine deaminases (ADAs) are present in pro- and eukaryotic organisms and catalyze the zinc dependent irreversible deamination of adenosine nucleosides to inosine nucleosides and ammonia. The eukaryotic AMP deaminase catalyzes a similar reaction leading to the hydrolytic removal of an amino group at the 6 position of the adenine nucleotide ring, a branch point in the adenylate catabolic pathway.

>COG5016 Pyruvate/oxaloacetate carboxyltransferase [Energy production and conversion]

Probab=86.20  E-value=10  Score=36.62  Aligned_cols=107  Identities=19%  Similarity=0.139  Sum_probs=63.0

Q ss_pred             HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC-ceeEEeeeeeeC--CChhhHHHHHHHHHcCCcEEEE
Q 015826          119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YVDVGFWGGLVP--ENAYNASALEALLNAGVLGLKS  195 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~l~~l~~~G~~~ik~  195 (399)
                      ......+..+|++.++.+-.     ..+...++..++.++..+ +.........++  .-+...+..+++.+.|+++|.+
T Consensus       101 e~Fv~ka~~nGidvfRiFDA-----lND~RNl~~ai~a~kk~G~h~q~~i~YT~sPvHt~e~yv~~akel~~~g~DSIci  175 (472)
T COG5016         101 EKFVEKAAENGIDVFRIFDA-----LNDVRNLKTAIKAAKKHGAHVQGTISYTTSPVHTLEYYVELAKELLEMGVDSICI  175 (472)
T ss_pred             HHHHHHHHhcCCcEEEechh-----ccchhHHHHHHHHHHhcCceeEEEEEeccCCcccHHHHHHHHHHHHHcCCCEEEe
Confidence            34567788999999886631     123445555555554322 222221111111  1122456677888899987654


Q ss_pred             eecCCCCCCCCCCCHHHHHHHHHHHHh-cCCCEEEecCChhh
Q 015826          196 FMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG  236 (399)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~  236 (399)
                      -      +-....++....+++...++ +++++.+|++....
T Consensus       176 K------DmaGlltP~~ayelVk~iK~~~~~pv~lHtH~TsG  211 (472)
T COG5016         176 K------DMAGLLTPYEAYELVKAIKKELPVPVELHTHATSG  211 (472)
T ss_pred             e------cccccCChHHHHHHHHHHHHhcCCeeEEecccccc
Confidence            2      01124677788888887775 79999999876543

>PTZ00124 adenosine deaminase; Provisional

Probab=85.25  E-value=30  Score=33.38  Aligned_cols=108  Identities=19%  Similarity=0.160  Sum_probs=60.0

Q ss_pred             HHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceE
Q 015826          211 SHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHL  290 (399)
Q Consensus       211 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~v  290 (399)
                      ..+..+++.|++.|+++.+|+.....             +.+             ...+...+....          . -
T Consensus       206 ~~f~~~f~~Ar~~Gl~~t~HaGE~~~-------------~~~-------------~~~v~~ai~~l~----------~-~  248 (362)
T PTZ00124        206 KPFKDIFDYVREAGVNLTVHAGEDVT-------------LPN-------------LNTLYSAIQVLK----------V-K  248 (362)
T ss_pred             HHHHHHHHHHHHCCCCEEEEeCCCCC-------------CCc-------------chhHHHHHHHhC----------C-C
Confidence            45788999999999999999943110             000             001222222111          1 1


Q ss_pred             EEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          291 HIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       291 hi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                      -|.|.....++-++++..++++  |..|+||..=           -..+..+-+.    .-.+.+.++.|..-+|+||.-
T Consensus       249 RIGHG~~~~~d~~l~~~l~~~~--I~lEvCPtSN-----------~~~~~v~~~~----~HPi~~l~~~Gv~v~InTDDp  311 (362)
T PTZ00124        249 RIGHGIRVAESQELIDMVKEKD--ILLEVCPISN-----------VLLNNAKSMD----THPIRKLYDAGVKVSVNSDDP  311 (362)
T ss_pred             ccccccccCCCHHHHHHHHHcC--CeEEECCcch-----------hhhhcCCchh----hHHHHHHHHCCCcEEEeCCCc
Confidence            3555443213345677777775  5667788410           1111222221    123667788899999999986


Q ss_pred             CC
Q 015826          371 PT  372 (399)
Q Consensus       371 p~  372 (399)
                      ..
T Consensus       312 ~~  313 (362)
T PTZ00124        312 GM  313 (362)
T ss_pred             cc
Confidence            55

>cd01321 ADGF Adenosine deaminase-related growth factors (ADGF), a novel family of secreted growth-factors with sequence similarty to adenosine deaminase

Probab=84.42  E-value=4.9  Score=38.54  Aligned_cols=111  Identities=19%  Similarity=0.205  Sum_probs=64.3

Q ss_pred             CHHHHHHHHHHHHhcC--CCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCC
Q 015826          209 NASHIKEGLSVLARYK--RPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAE  286 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g--~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~  286 (399)
                      +...+..+++.|++.|  +++.+|+.....             +.       ..+    ...+..++.+..+        
T Consensus       177 ~~~~f~~~f~~ar~~g~~l~~t~HAGE~~~-------------~~-------~~~----~~~v~~al~lg~~--------  224 (345)
T cd01321         177 PLLDFLPQLLWFPKQCAEIPFFFHAGETNG-------------DG-------TET----DENLVDALLLNTK--------  224 (345)
T ss_pred             CHHHHHHHHHHHHHhCCCCceEeecCCCcC-------------CC-------CCC----hhHHHHHHHhCCC--------
Confidence            5678889999999999  999999943210             00       000    1134444433211        


Q ss_pred             CceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEe
Q 015826          287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLS  366 (399)
Q Consensus       287 g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~  366 (399)
                          -|.|.....++-++++..++++  |..|+||-.     +.      ..+..|.++.    -.+.+.++.|..-+|+
T Consensus       225 ----RIGHG~~~~~dp~ll~~l~~~~--I~lEvCPtS-----N~------~~~~v~~~~~----HPl~~ll~~Gv~vtin  283 (345)
T cd01321         225 ----RIGHGFALPKHPLLMDLVKKKN--IAIEVCPIS-----NQ------VLGLVSDLRN----HPAAALLARGVPVVIS  283 (345)
T ss_pred             ----cCccccccCcCHHHHHHHHHcC--CeEEECcch-----hh------hhccccchhh----ChHHHHHHCCCeEEEe
Confidence                3556543213456777777774  567788841     00      1112232221    1266778889999999


Q ss_pred             CCCCCC
Q 015826          367 SDHSPT  372 (399)
Q Consensus       367 sdh~p~  372 (399)
                      ||.-..
T Consensus       284 TDDp~~  289 (345)
T cd01321         284 SDDPGF  289 (345)
T ss_pred             CCCcch
Confidence            998655

>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]

Probab=84.31  E-value=2.3  Score=37.21  Aligned_cols=38  Identities=24%  Similarity=0.402  Sum_probs=27.7

Q ss_pred             eeecccccCCC---CCCCcCchHHHHHHHHcCCeeeeecCc
Q 015826          100 LIDVHAHLDDP---GRTEWEGFPSGTKAAAAGGITTLIDMP  137 (399)
Q Consensus       100 lID~H~H~~~~---~~~~~e~~~~~~~~al~~GvTtv~d~~  137 (399)
                      +||+|+|+-..   |..+.++.....++|.+.|||+++.-+
T Consensus         1 MIDIH~HIlp~iDDGp~s~eesl~ml~~A~~qGvt~iVaTs   41 (254)
T COG4464           1 MIDIHSHILPDIDDGPKSLEESLAMLREAVRQGVTKIVATS   41 (254)
T ss_pred             CccccccccCCCCCCCCcHHHHHHHHHHHHHcCceEEeecc
Confidence            58999998432   334445555667888999999998765

>PRK14042 pyruvate carboxylase subunit B; Provisional

Probab=82.68  E-value=14  Score=38.17  Aligned_cols=107  Identities=14%  Similarity=0.073  Sum_probs=62.5

Q ss_pred             HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCc-eeEEeeeeeeC-CChh-hHHHHHHHHHcCCcEEEE
Q 015826          119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY-VDVGFWGGLVP-ENAY-NASALEALLNAGVLGLKS  195 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~-~~~~l~~l~~~G~~~ik~  195 (399)
                      +...+.+.++|+..++.+-.     ......++..++.+...+. +.........+ .+.+ ..+..+++.+.|+..|.+
T Consensus        99 ~~~v~~a~~~Gidv~Rifd~-----lnd~~n~~~~i~~~k~~G~~~~~~i~yt~sp~~t~e~~~~~ak~l~~~Gad~I~I  173 (596)
T PRK14042         99 RAFVKLAVNNGVDVFRVFDA-----LNDARNLKVAIDAIKSHKKHAQGAICYTTSPVHTLDNFLELGKKLAEMGCDSIAI  173 (596)
T ss_pred             HHHHHHHHHcCCCEEEEccc-----CcchHHHHHHHHHHHHcCCEEEEEEEecCCCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence            44577889999999886641     1234455555555543322 22111111111 1222 234556667789987654


Q ss_pred             eecCCCCCCCCCCCHHHHHHHHHHHHh-cCCCEEEecCChhh
Q 015826          196 FMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKG  236 (399)
Q Consensus       196 ~~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~  236 (399)
                      -      +-....++..+.+++...++ .++++.+|+++...
T Consensus       174 k------DtaG~l~P~~v~~lv~alk~~~~ipi~~H~Hnt~G  209 (596)
T PRK14042        174 K------DMAGLLTPTVTVELYAGLKQATGLPVHLHSHSTSG  209 (596)
T ss_pred             C------CcccCCCHHHHHHHHHHHHhhcCCEEEEEeCCCCC
Confidence            2      11235788888888888775 58999999987654

>PRK12330 oxaloacetate decarboxylase; Provisional

Probab=82.62  E-value=13  Score=37.48  Aligned_cols=106  Identities=9%  Similarity=0.051  Sum_probs=62.2

Q ss_pred             HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC-ce--eEEeeeeeeCCChh-hHHHHHHHHHcCCcEEE
Q 015826          119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI-YV--DVGFWGGLVPENAY-NASALEALLNAGVLGLK  194 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~-~~~~l~~l~~~G~~~ik  194 (399)
                      ....+.+..+|+..++-+-    + ......++..++.+...+ .+  .+.+..+-. .+.+ ..+..+++.+.|+..|.
T Consensus       100 ~~fv~~a~~~Gidi~RIfd----~-lndv~nl~~ai~~vk~ag~~~~~~i~yt~sp~-~t~e~~~~~a~~l~~~Gad~I~  173 (499)
T PRK12330        100 DRFVEKSAENGMDVFRVFD----A-LNDPRNLEHAMKAVKKVGKHAQGTICYTVSPI-HTVEGFVEQAKRLLDMGADSIC  173 (499)
T ss_pred             HHHHHHHHHcCCCEEEEEe----c-CChHHHHHHHHHHHHHhCCeEEEEEEEecCCC-CCHHHHHHHHHHHHHcCCCEEE
Confidence            3456788899999977553    1 123345555555444222 22  222211111 1222 33455667778998775


Q ss_pred             EeecCCCCCCCCCCCHHHHHHHHHHHHhc---CCCEEEecCChhh
Q 015826          195 SFMCPSGINDFPMTNASHIKEGLSVLARY---KRPLLVHAEMEKG  236 (399)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~---g~~v~~H~~~~~~  236 (399)
                      +-      +-....+++.+.+++...++.   ++++.+|+++...
T Consensus       174 Ik------DtaGll~P~~~~~LV~~Lk~~~~~~ipI~~H~Hnt~G  212 (499)
T PRK12330        174 IK------DMAALLKPQPAYDIVKGIKEACGEDTRINLHCHSTTG  212 (499)
T ss_pred             eC------CCccCCCHHHHHHHHHHHHHhCCCCCeEEEEeCCCCC
Confidence            42      122357888999998888764   6999999987653

>PRK12581 oxaloacetate decarboxylase; Provisional

Probab=82.37  E-value=31  Score=34.43  Aligned_cols=106  Identities=16%  Similarity=0.109  Sum_probs=63.0

Q ss_pred             HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCc-eeEEeeeeeeCC-Chh-hHHHHHHHHHcCCcEEEEe
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY-VDVGFWGGLVPE-NAY-NASALEALLNAGVLGLKSF  196 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~-~~~~l~~l~~~G~~~ik~~  196 (399)
                      ...+.+.+.|+..++.+-.     ....+.++..++.++..+. +.........+. +.+ ..+..+++.+.|+..|.+.
T Consensus       109 ~fv~~a~~~Gidi~Rifd~-----lnd~~n~~~ai~~ak~~G~~~~~~i~yt~sp~~t~~y~~~~a~~l~~~Gad~I~Ik  183 (468)
T PRK12581        109 KFISLSAQNGIDVFRIFDA-----LNDPRNIQQALRAVKKTGKEAQLCIAYTTSPVHTLNYYLSLVKELVEMGADSICIK  183 (468)
T ss_pred             HHHHHHHHCCCCEEEEccc-----CCCHHHHHHHHHHHHHcCCEEEEEEEEEeCCcCcHHHHHHHHHHHHHcCCCEEEEC
Confidence            3467788999999886641     1234555555555543322 222211111221 111 3455666777899877542


Q ss_pred             ecCCCCCCCCCCCHHHHHHHHHHHHhc-CCCEEEecCChhh
Q 015826          197 MCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAEMEKG  236 (399)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~  236 (399)
                            +-....+++.+.++++..++. ++++.+|+++...
T Consensus       184 ------DtaG~l~P~~v~~Lv~alk~~~~~pi~~H~Hnt~G  218 (468)
T PRK12581        184 ------DMAGILTPKAAKELVSGIKAMTNLPLIVHTHATSG  218 (468)
T ss_pred             ------CCCCCcCHHHHHHHHHHHHhccCCeEEEEeCCCCc
Confidence                  122357888888888888764 6899999987653

>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases

Probab=81.61  E-value=31  Score=32.13  Aligned_cols=108  Identities=12%  Similarity=0.067  Sum_probs=58.3

Q ss_pred             cCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHH----HHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCC
Q 015826          115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVD----AAEKRIYVDVGFWGGLVPENAYNASALEALLNAGV  190 (399)
Q Consensus       115 ~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~  190 (399)
                      .+.+....+..+..|+..++-.+....-...+.+...+..+    ...++..+-.    +......+..+..+...+.|+
T Consensus        20 ~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~----gv~~~t~~~i~~a~~a~~~Ga   95 (289)
T cd00951          20 EDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA----GAGYGTATAIAYAQAAEKAGA   95 (289)
T ss_pred             HHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE----ecCCCHHHHHHHHHHHHHhCC
Confidence            34456667778899999987665222222223333333333    2222222111    222234455666677777899


Q ss_pred             cEEEEeecCCCCCCCCCCCHHHHHHHHHH-HHhcCCCEEEec
Q 015826          191 LGLKSFMCPSGINDFPMTNASHIKEGLSV-LARYKRPLLVHA  231 (399)
Q Consensus       191 ~~ik~~~~~~~~~~~~~~~~~~l~~~~~~-a~~~g~~v~~H~  231 (399)
                      +++-+.  ++   .+...+++.+.+-++. +...++|+.+.-
T Consensus        96 d~v~~~--pP---~y~~~~~~~i~~~f~~v~~~~~~pi~lYn  132 (289)
T cd00951          96 DGILLL--PP---YLTEAPQEGLYAHVEAVCKSTDLGVIVYN  132 (289)
T ss_pred             CEEEEC--CC---CCCCCCHHHHHHHHHHHHhcCCCCEEEEe
Confidence            988553  21   1223466766665544 445788988874

The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.

>PTZ00372 endonuclease 4-like protein; Provisional

Probab=80.70  E-value=61  Score=31.88  Aligned_cols=71  Identities=13%  Similarity=0.052  Sum_probs=49.2

Q ss_pred             cCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCC---EEEecCC
Q 015826          160 RIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP---LLVHAEM  233 (399)
Q Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~---v~~H~~~  233 (399)
                      ...+.++.|..+..+   ....+++..+.|+..|.+|...+-.-..+..+++.+.+..+.++++|+.   +.+|+.-
T Consensus       128 ~~~~~iGaHvSiaGG---~~~a~~~a~~~g~~afqiF~~npr~w~~~~~~~~~~~~f~~~~~~~gi~~~~i~~HapY  201 (413)
T PTZ00372        128 KSNVYIGAHVSASGG---VDNSPINAYNIAGQAFALFLKNQRTWNSPPLSDETIDKFKENCKKYNYDPKFILPHGSY  201 (413)
T ss_pred             ccCceEEEEEecccc---HHHHHHHHHHcCCCEEEEEcCCCccCCCCCCCHHHHHHHHHHHHHcCCCcceEEeecCc
Confidence            344566666554322   2346777888899999998766522223457889999999999999763   7889753

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	399
3hm7_A	448	Crystal Structure Of Allantoinase From Bacillus Hal		2e-51
3e74_A	473	Crystal Structure Of E. Coli Allantoinase With Iron		6e-46
1gkr_A	458	L-Hydantoinase (Dihydropyrimidinase) From Arthrobac		2e-22
3mpg_A	428	Dihydroorotase From Bacillus Anthracis Length = 428		3e-18
2z00_A	426	Crystal Structure Of Dihydroorotase From Thermus Th		1e-16
1xrf_A	467	The Crystal Structure Of A Novel, Latent Dihydrooro		1e-14
3d6n_A	422	Crystal Structure Of Aquifex Dihydroorotase Activat		1e-14
1yny_A	461	Molecular Structure Of D-Hydantoinase From A Bacill		6e-14
3sfw_A	461	Crystal Structure Of Dihydropyrimidinase From Brevi		1e-13
3gri_A	424	The Crystal Structure Of A Dihydroorotase From Stap		2e-13
1k1d_A	460	Crystal Structure Of D-Hydantoinase Length = 460		2e-10
2gwn_A	452	The Structure Of Putative Dihydroorotase From Porph		4e-09
1nfg_A	457	Structure Of D-Hydantoinase Length = 457		1e-08
2fty_A	559	Crystal Structure Of Dihydropyrimidinase From Sacch		2e-07
3dc8_A	490	Crystal Structure Of Dihydropyrimidinase From Sinor		3e-07
1gkp_A	458	D-Hydantoinase (Dihydropyrimidinase) From Thermus S		7e-07

>pdb|3HM7|A Chain A, Crystal Structure Of Allantoinase From Bacillus Halodurans C-125 Length = 448

Iteration: 1
 Score =  199 bits (507), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/335 (36%), Positives = 175/335 (52%), Gaps = 20/335 (5%)
Query: 63  VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXX 122
           V I+ G I+S ++E     +S  G  +D     + PG++DVH H ++PGRTEWEGF S  
Sbjct: 26  VAIRNG-IVSAITEPG-SISSDDGPAIDGTGLHLFPGMVDVHVHFNEPGRTEWEGFASGS 83
Query: 123 XXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASAL 182
                       DMPLNS+P TI+ E L  K   A ++  VD  FWGGLVP    N   L
Sbjct: 84  KSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPG---NIDHL 140
Query: 183 EALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK--GSERH 240
           + L + GV+G K+FM   G +DF  ++   + +G+  +A     L VHAE  +   +   
Sbjct: 141 QDLHDGGVIGFKAFMSECGTDDFQFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTT 200
Query: 241 VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXX 300
           + +E+  L  + YS   + RP   E  A+  +L  A+ T          +HI H      
Sbjct: 201 IAIEEQRLTVKDYS---EARPIVSELEAVERILRFAQLT-------CCPIHICHVSSRKV 250
Query: 301 XXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG 360
                 +AK  G +++VETCPHYL FS +E  +     KCAPP+R+    E LW+ LM G
Sbjct: 251 LKRIK-QAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDGLMAG 309
Query: 361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
            ID++SSDHSP++P++K        + WGGI+  Q
Sbjct: 310 EIDLISSDHSPSLPQMK--TGKTIFEVWGGIAGCQ 342

>pdb|3E74|A Chain A, Crystal Structure Of E. Coli Allantoinase With Iron Ions At The Metal Center Length = 473

Iteration: 1
 Score =  181 bits (459), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/318 (35%), Positives = 152/318 (47%), Gaps = 29/318 (9%)
Query: 87  QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTIS 146
           +V D    V+ PG +D H H+ +PGR+ WEG+ +             I+ PLN  P+T+ 
Sbjct: 62  EVXDASGLVVSPGXVDAHTHISEPGRSHWEGYETGTRAAAKGGITTXIEXPLNQLPATVD 121
Query: 147 TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGI---- 202
             +++LK DAA+ ++ +D    GGLV   +YN   L  L   GV+G   F+   G     
Sbjct: 122 RASIELKFDAAKGKLTIDAAQLGGLV---SYNIDRLHELDEVGVVGFXCFVATCGDRGID 178
Query: 203 NDFPMTNASHIKEGLSVLARYKRPLLVHAEM-----EKGSERHVKLEDDTLDTRSYSTYL 257
           NDF   N     +G   L    +P+LVH E      E G E   K E       +   Y+
Sbjct: 179 NDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEE--AKREGRV----TAHDYV 232
Query: 258 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITV 317
            +RP   E  AIR +L +AK         G  LH+ H             A+  G  IT 
Sbjct: 233 ASRPVFTEVEAIRRVLYLAK-------VAGCRLHVCHVSSPEGVEEV-TRARQEGQDITC 284
Query: 318 ETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK 377
           E+CPHY     ++  +  T  KC+PPIRD  N++  WE L +G ID L SDHSP  PE K
Sbjct: 285 ESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGXWEKLFNGEIDCLVSDHSPCPPEXK 344
Query: 378 LLDEGNFLKAWGGISSLQ 395
               GN  KAWGGI+ LQ
Sbjct: 345 ---AGNIXKAWGGIAGLQ 359

>pdb|1GKR|A Chain A, L-Hydantoinase (Dihydropyrimidinase) From Arthrobacter Aurescens Length = 458

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/323 (25%), Positives = 141/323 (43%), Gaps = 23/323 (7%)
Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
           R+V+  G+    + +K+G + +I ++      S+T   +D G   +MPG++D H H+ D 
Sbjct: 10  RLVSSDGITEADILVKDGKVAAISADTSDVEASRT---IDAGGKFVMPGVVDEHVHIIDM 66
Query: 111 G-RTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169
             +  +  F              +I+MP+   P+T     L+ K  A + R+ VD   +G
Sbjct: 67  DLKNRYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQ-RLKVDFALYG 125
Query: 170 GLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV 229
           G VP N      +  + +AG +G  S M  S    F   +   + E    +A     ++V
Sbjct: 126 GGVPGNL---PEIRKMHDAGAVGFXSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVV 182
Query: 230 HAEME---KGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAE 286
           HAE E   +  ++ +K        +  + Y  ++P   E  AI+  L + K+        
Sbjct: 183 HAENETIIQALQKQIK----AAGGKDMAAYEASQPVFQENEAIQRALLLQKEA------- 231
Query: 287 GAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD 346
           G  L ++H            +A++ G  +  E+ P YL  + ++        K APP+R 
Sbjct: 232 GCRLIVLHVSNPDGVELIH-QAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRS 290
Query: 347 AANKEKLWEALMDGHIDMLSSDH 369
           A    +LWE L +G ID L SDH
Sbjct: 291 AEMNIRLWEQLENGLIDTLGSDH 313

>pdb|3MPG|A Chain A, Dihydroorotase From Bacillus Anthracis Length = 428

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 135/339 (39%), Gaps = 32/339 (9%)
Query: 44  QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDV 103
            Y   + R +  +G I     + +   I+ V+E     N+   +V+D    +I PGL+DV
Sbjct: 2   NYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENITADNA---EVIDVNGKLIAPGLVDV 58
Query: 104 HAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYV 163
           H HL +PG    E   +            +  MP N+ P     E ++   +  +++ +V
Sbjct: 59  HVHLREPGGEHKETIETGTLAAAKGGFTTICAMP-NTRPVPDCREHMEDLQNRIKEKAHV 117
Query: 164 DVGFWGGL-VPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR 222
           +V  +G + V +     +  E L   G             +   + +AS +   +   A+
Sbjct: 118 NVLPYGAITVRQAGSEMTDFETLKELGAFAFTD-------DGVGVQDASMMLAAMKRAAK 170
Query: 223 YKRPLLVHAE----MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD 278
               ++ H E    + KG     K         S    L   P   E   I   + +A+ 
Sbjct: 171 LNMAVVAHCEENTLINKGCVHEGKF--------SEKHGLNGIPSVCESVHIARDILLAE- 221
Query: 279 TRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRF 338
                 A   H H+ H            +AK  G  +T E  PH+L    ++IP  D  F
Sbjct: 222 ------AADCHYHVCHVSTKGSVRVIR-DAKRAGIKVTAEVTPHHLVLCEDDIPSADPNF 274
Query: 339 KCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK 377
           K  PP+R   + E L E L+DG IDM+++DH+P   E K
Sbjct: 275 KMNPPLRGKEDHEALIEGLLDGTIDMIATDHAPHTAEEK 313

>pdb|2Z00|A Chain A, Crystal Structure Of Dihydroorotase From Thermus Thermophilus Length = 426

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 149/355 (41%), Gaps = 36/355 (10%)
Query: 51  RIVTPKGVISGA-VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD 109
           R+V  +G    A V I EG I+S+          +  QVVD     + PG +D+HAHL +
Sbjct: 8   RLVDARGERGPADVLIGEGRILSL-------EGGEAKQVVDGTGCFLAPGFLDLHAHLRE 60
Query: 110 PGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169
           PG    E   S            L+  P N+ P   + E ++   + A+           
Sbjct: 61  PGEEVKEDLFSGLLAAVRGGYTDLVSXP-NTKPPVDTPEAVRALKEKAK----------- 108
Query: 170 GLVPENAYNASALEALLNAGVLGLKSFMCPSG---INDFPMTN--ASHIKEGLSVLARYK 224
            L     + A+AL        L     +  +G   + D   TN  A  +  GL   A   
Sbjct: 109 ALGLARLHPAAALTEKQEGKTLTPAGLLREAGAVLLTDDGRTNEDAGVLAAGLLXAAPLG 168
Query: 225 RPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGP 284
            P+ VHAE + G  R+    D  L   +    L   PP  E A I   L V +      P
Sbjct: 169 LPVAVHAE-DAGLRRNGVXNDGPL---ADLLGLPGNPPEAEAARIARDLEVLRYALRRSP 224
Query: 285 AEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI 344
           A    LH+ H            EAK  G  +T E  PH+L  + E +   D  FK APP+
Sbjct: 225 AT-PRLHVQHLSTKRGLELV-REAKRAGLPVTAEATPHHLTLTEEALRTFDPLFKVAPPL 282
Query: 345 RDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQVGY 398
           R   ++E L E L+DG +D +++DH+P T+ E     E + L+A  GI SL+V +
Sbjct: 283 RGEEDREALLEGLLDGTLDAIATDHAPHTLAE----KEKDLLRAPFGIPSLEVAF 333

>pdb|1XRF|A Chain A, The Crystal Structure Of A Novel, Latent Dihydroorotase From Aquifex Aeolicus At 1.7 A Resolution Length = 467

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 26/288 (9%)
Query: 87  QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTIS 146
           +++D    ++ PG ID+H HL DPG+T  E   S            ++ MP N++P   +
Sbjct: 89  EIIDAKGLIVCPGFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMP-NTNPPIDN 147
Query: 147 TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND-F 205
           T  +   +  ++      VG    L           + +  A    LK   C +  +D  
Sbjct: 148 TTVVNYILQKSK-----SVGLCRVLPTGTITKGRKGKEI--ADFYSLKEAGCVAFTDDGS 200
Query: 206 PMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL--KTRPPS 263
           P+ ++S +++ L + ++   P++ H E +K       L    ++    S  L   +R P 
Sbjct: 201 PVMDSSVMRKALELASQLGVPIMDHCEDDK-------LAYGVINEGEVSALLGLSSRAPE 253
Query: 264 WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHY 323
            EE  I     +A+ T       G H+HI H              K  G  IT E  P++
Sbjct: 254 AEEIQIARDGILAQRT-------GGHVHIQHVSTKLSLEIIEF-FKEKGVKITCEVNPNH 305
Query: 324 LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371
           L F+  E+ +     +  PP+R   ++  L E +  G ID  ++DH+P
Sbjct: 306 LLFTEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAP 353

>pdb|3D6N|A Chain A, Crystal Structure Of Aquifex Dihydroorotase Activated By Aspartate Transcarbamoylase Length = 422

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/288 (23%), Positives = 120/288 (41%), Gaps = 26/288 (9%)
Query: 87  QVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTIS 146
           +++D    ++ PG ID+H HL DPG+T  E   S            ++ MP N++P   +
Sbjct: 44  EIIDAKGLIVCPGFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMP-NTNPPIDN 102
Query: 147 TETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND-F 205
           T  +   +  ++      VG    L           + +  A    LK   C +  +D  
Sbjct: 103 TTVVNYILQKSK-----SVGLCRVLPTGTITKGRKGKEI--ADFYSLKEAGCVAFTDDGS 155
Query: 206 PMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL--KTRPPS 263
           P+ ++S +++ L + ++   P++ H E +K       L    ++    S  L   +R P 
Sbjct: 156 PVMDSSVMRKALELASQLGVPIMDHCEDDK-------LAYGVINEGEVSALLGLSSRAPE 208
Query: 264 WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHY 323
            EE  I     +A+ T       G H+HI H              K  G  IT E  P++
Sbjct: 209 AEEIQIARDGILAQRT-------GGHVHIQHVSTKLSLEIIEF-FKEKGVKITCEVNPNH 260
Query: 324 LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371
           L F+  E+ +     +  PP+R   ++  L E +  G ID  ++DH+P
Sbjct: 261 LLFTEREVLNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAP 308

>pdb|1YNY|A Chain A, Molecular Structure Of D-Hydantoinase From A Bacillus Sp. Ar9: Evidence For Mercury Inhibition Length = 461

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 147/365 (40%), Gaps = 58/365 (15%)
Query: 46  WLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHA 105
           W+    +VT        V I+   +++I  +     +    + +D     ++PG ID H 
Sbjct: 4   WIRGGTVVTAADTYQADVLIEGERVVAIGHQ----LSVNGAEEIDATGCYVIPGGIDPHT 59
Query: 106 HLDDP--GRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKV----DAAEK 159
           HLD P  G    + F +            ++D  L     T   E+LK  +    + A  
Sbjct: 60  HLDMPFGGTVTADDFFTGTRAAAFGGTTSIVDFCL-----TKKGESLKSAIATWHEKARG 114
Query: 160 RIYVDVGFWGGLVPENAYNASALEALLNA-GVLGLKSFMCPSGINDFPMTNASHIKEGLS 218
           +  +D GF   +   N      LE+++++ G+  LK FM     N F   + +  K   +
Sbjct: 115 KAVIDYGFHLMIAEANDQVLEELESVISSEGITSLKVFMAYK--NVFQADDETLFK---T 169
Query: 219 VLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRS------------YSTYLKTRPPSWE- 265
           ++   +   LV    E G         D LD  +            Y  Y  TRPP  E 
Sbjct: 170 LVKAKELGALVQVHAENG---------DVLDYLTKKALAEGNTDPIYHAY--TRPPEAEG 218
Query: 266 EAAIRELLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLA 325
           EA  R +   A          G+ L++VH            EA+  G ++  ETCP YLA
Sbjct: 219 EATGRAIALTA--------LAGSQLYVVHVSCASAVQRIA-EAREKGWNVYGETCPQYLA 269
Query: 326 F--SAEEIPDGD-TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDE 381
              S  + PD +  ++  +PP+R+  N+E LW AL +G +  + SDH P      K L  
Sbjct: 270 LDVSIMDQPDFEGAKYVWSPPLREKWNQEVLWSALKNGILQTVGSDHCPFNFRGQKELGR 329
Query: 382 GNFLK 386
           G+F K
Sbjct: 330 GDFTK 334

>pdb|3SFW|A Chain A, Crystal Structure Of Dihydropyrimidinase From Brevibacillus Agri Nchu1002 Length = 461

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 140/336 (41%), Gaps = 31/336 (9%)
Query: 46  WLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHA 105
           W+ +  +VT        V I    +++I S+      +   +V+D     ++PG ID H 
Sbjct: 4   WIRNGTVVTASDTYQADVLIDGEKVVAIGSD----LQATDAEVIDATGYYLLPGGIDPHT 59
Query: 106 HLDDP--GRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYV 163
           HLD P  G    + F +            ++D  L S   ++ +        A  K + +
Sbjct: 60  HLDMPFGGTVTSDNFFTGTKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAV-I 118
Query: 164 DVGFWGGLVPENAYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR 222
           D GF   +   N +    LE+++N  G+  L  FM    +    M +   + + L     
Sbjct: 119 DYGFHLMVSDANDHVLEELESVVNNEGITSLXVFMAYKNV---LMADDETLFKTLIRAKE 175
Query: 223 YKRPLLVHAEMEKGSERHVK--LEDDTLDTRSYSTYLKTRPPSWE-EAAIREL-LTVAKD 278
               + VHAE     +   K  L +   D   Y  Y  TRPP  E EA  R + LT   D
Sbjct: 176 LGALVQVHAENGDVLDYLTKQALAEGNTDP-IYHAY--TRPPEAEGEATGRAIALTALAD 232
Query: 279 TRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAF--SAEEIPDGD- 335
                    A L++VH            EA+  G ++  ETCP YL    +A E PD + 
Sbjct: 233 ---------AQLYVVHVSCADAVRRIA-EAREKGWNVYGETCPQYLVLDITALEKPDFEG 282
Query: 336 TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371
            ++  +PP+R+  N++ LW AL +G +  + SDH P
Sbjct: 283 AKYVWSPPLREKWNQDVLWSALKNGILQTVGSDHCP 318

>pdb|3GRI|A Chain A, The Crystal Structure Of A Dihydroorotase From Staphylococcus Aureus Length = 424

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/326 (23%), Positives = 125/326 (38%), Gaps = 35/326 (10%)
Query: 53  VTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR 112
           V   G +  A  + +G +I  ++    P N     ++D     + PG +DVH HL +PG 
Sbjct: 9   VLQNGELQQADILIDGKVIKQIAPAIEPSNGV--DIIDAKGHFVSPGFVDVHVHLREPGG 66
Query: 113 TEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETL----KLKVDAAEKRIYVDVGFW 168
              E   +            +   P N+ P   S E      KL  D A+ R+   + + 
Sbjct: 67  EYKETIETGTKAAARGGFTTVCPXP-NTRPVPDSVEHFEALQKLIDDNAQVRV---LPYA 122
Query: 169 GGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLL 228
                +         AL+  G           G+    +  AS   EG    A+  + ++
Sbjct: 123 SITTRQLGKELVDFPALVKEGAFAFTD----DGVG---VQTASXXYEGXIEAAKVNKAIV 175
Query: 229 VHAE---MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285
            H E   +  G   H          RS    +   P   E   I   + +A+       A
Sbjct: 176 AHCEDNSLIYGGAXHE-------GKRSKELGIPGIPNICESVQIARDVLLAE-------A 221
Query: 286 EGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIR 345
            G H H+ H            +AK  G  +T E  PH+L  + ++IP  +  +K  PP+R
Sbjct: 222 AGCHYHVCHVSTKESVRVI-RDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKXNPPLR 280
Query: 346 DAANKEKLWEALMDGHIDMLSSDHSP 371
              ++E L E L+DG ID +++DH+P
Sbjct: 281 STEDREALLEGLLDGTIDCIATDHAP 306

>pdb|1K1D|A Chain A, Crystal Structure Of D-Hydantoinase Length = 460

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 133/348 (38%), Gaps = 36/348 (10%)
Query: 52  IVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP- 110
           IVT        + IK+G I  I    +     K  +V+D     + PG ID H HLD P 
Sbjct: 10  IVTATDTYEAHLLIKDGKIAMIGQNLE----EKGAEVIDAKGCYVFPGGIDPHTHLDMPL 65
Query: 111 -GRTEWEGFPSXXXXXXXXXXXXLIDMPLNS--DPSTISTETLKLKVDAAEKRIYVDVGF 167
            G    + F S            +ID  L +  +P   + ET   K   A  +  +D GF
Sbjct: 66  GGTVTKDDFESGTIAAAFGGTTTIIDFCLTNKGEPLKKAIETWHNK---ANGKAVIDYGF 122
Query: 168 WGGLVPENAYNASALE----ALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY 223
               +  +      LE     L   G+  L  FM     N F   + +      ++LA  
Sbjct: 123 H---LMISEITDDVLEELPKVLEEEGITSLXVFMAYK--NVFQADDGTLY---CTLLAAK 174
Query: 224 KRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLK-TRPPSWEEAAIRELLTVAKDTRTD 282
           +   LV    E G       +    D  +   Y   TRPP  E  A      + +     
Sbjct: 175 ELGALVMVHAENGDVIDYLTKKALADGNTDPIYHALTRPPELEGEATGRACQLTE----- 229
Query: 283 GPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAF--SAEEIPDGD-TRFK 339
               G+ L++VH            EA+  G  +  ETCP YL    S  E P+ +  ++ 
Sbjct: 230 --LAGSQLYVVHVTCAQAVEKIA-EARNKGLDVWGETCPQYLVLDQSYLEKPNFEGAKYV 286
Query: 340 CAPPIRDAANKEKLWEALMDGHIDMLSSDH-SPTVPELKLLDEGNFLK 386
            +PP+R+  ++E LW AL +G +  L SD  S      K L  G+F K
Sbjct: 287 WSPPLREKWHQEVLWNALKNGQLQTLGSDQCSFDFKGQKELGRGDFTK 334

>pdb|2GWN|A Chain A, The Structure Of Putative Dihydroorotase From Porphyromonas Gingivalis Length = 452

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 145/351 (41%), Gaps = 29/351 (8%)
Query: 47  LTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPR--NSKTGQVVDYGEAVIMPGLIDV 103
           L    ++T +G    G+V I +G  IS + E + P   N    +V++     + PG ID 
Sbjct: 7   LLRNALITNEGKTFPGSVXI-DGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDD 65
Query: 104 HAHLDDPGRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYV 163
             H  +PG T      S              D P  + P+T     L+ +   A+   + 
Sbjct: 66  QVHFREPGLTHKATIASESRAAVAGGVTSFXDXPNTNPPTTXWERLLEKRQIGADT-AWA 124
Query: 164 DVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY 223
           + GF+ G   +N      ++  L   V GL  F+  S  N   + N   +++   +    
Sbjct: 125 NYGFFFGGTNDNIDEIKRVDKHL---VPGLXLFLGSSTGNXL-VDNKETLEK---IFGEC 177
Query: 224 KRPLLVHAEME---KGSERHVKLE-DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDT 279
              +  H E E   + ++ H K +  + LD   +   +++    +  +A  E + +A+  
Sbjct: 178 DLLIATHCEKEEIIRANKEHYKAKYGNDLDIH-FHPLIRSEEACYRSSA--EAVELAERX 234
Query: 280 RTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFK 339
                   A LHI+H            +  T    IT E C H+L FS  +      R K
Sbjct: 235 -------NARLHILHLSTEKELSLFRNDIPTAQKRITSEVCVHHLWFSDTDYGRLGNRIK 287
Query: 340 CAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGG 390
             P I+  +++E L  A+ +G ID++++DH+P +   K   EG+ L+A  G
Sbjct: 288 WNPAIKKESDREALRAAVRNGRIDIIATDHAPHLLREK---EGSCLQAASG 335

>pdb|1NFG|A Chain A, Structure Of D-Hydantoinase Length = 457

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 122/324 (37%), Gaps = 25/324 (7%)
Query: 52  IVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG 111
           IVT  G+    + IK+G I  I             + +D     + PG IDVH H++   
Sbjct: 10  IVTADGISRADLGIKDGKITQIGGAL-----GPAERTIDAAGRYVFPGGIDVHTHVETVS 64
Query: 112 RTEWEGFPSXXXXXXXX--XXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169
                                  ++D        +++    K    A  K   +D G+  
Sbjct: 65  FNTQSADTFATATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKSA-IDYGYHI 123
Query: 170 GLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV 229
            ++         LE L + G+     FM   G+N   M +   + + L    +    ++V
Sbjct: 124 IVLDPTDSVIEELEVLPDLGITSFXVFMAYRGMN---MIDDVTLLKTLDKAVKTGSLVMV 180
Query: 230 HAEMEKGSERHVKLEDDTLDTRSYSTYLK-TRPPSWEEAAIRELLTVAKDTRTDGPAEGA 288
           HAE   G       +    + ++   Y   +RPP  E  A    L +A+          A
Sbjct: 181 HAE--NGDAADYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALAEIVN-------A 231
Query: 289 HLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEI--PDGD-TRFKCAPPIR 345
            ++IVH           M AK+ G     ETC HYL  + E++  PD +  ++   PP R
Sbjct: 232 PIYIVHVTCEESLEEV-MRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFTPPAR 290
Query: 346 DAANKEKLWEALMDGHIDMLSSDH 369
              + + LW AL +G  + +SSDH
Sbjct: 291 AKKDHDVLWNALRNGVFETVSSDH 314

>pdb|2FTY|A Chain A, Crystal Structure Of Dihydropyrimidinase From Saccharomyces Kluyveri Length = 559

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 85/368 (23%), Positives = 135/368 (36%), Gaps = 71/368 (19%)
Query: 52  IVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG 111
           I T   + +  + +  G +  I +  D    S   +V+D   A I PG ID H H+D+P 
Sbjct: 12  ICTASDIYAAEIAVNNGKVQLIAASIDPSLGS---EVIDAEGAFITPGGIDAHVHVDEPL 68
Query: 112 R-------TEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDA-AEKRIYV 163
           +       T      S                     PS ++ E++KL VD  +E+ +Y 
Sbjct: 69  KLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALA-ESVKLDVDEYSEQTLYC 127
Query: 164 DVGFWGGLVPENAYNASALEAL---LNA-----GVLGLKSFMCPSG--INDFPMTNASHI 213
           D G    L      +  A E L   L A     GV  +  FM   G  I+D+ + +A + 
Sbjct: 128 DYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVXMFMTYPGLQISDYDIMSAMYA 187
Query: 214 --KEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRE 271
             K G + +   +   +V   +E        LE+  L    Y  +  +RP   E  A   
Sbjct: 188 TRKNGFTTMLHAENGDMVKWMIE-------ALEEQGLTDAYY--HGVSRPSIVEGEATNR 238
Query: 272 LLTVAKDTRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYL------- 324
            +T+A  T  D P    H+                +A+T G  +  ETCP Y        
Sbjct: 239 AITLA--TTMDTPILFVHV------SSPQAAEVIKQAQTKGLKVYAETCPQYALLSDAIT 290
Query: 325 ------------------AFSAEEIPDGDTRF-----KCAPPIRDAANKEKLWEALMDGH 361
                             + S     + D RF      C+PPIR    ++ +W+ + +G 
Sbjct: 291 RCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGT 350
Query: 362 IDMLSSDH 369
             ++ SDH
Sbjct: 351 FTIVGSDH 358

>pdb|3DC8|A Chain A, Crystal Structure Of Dihydropyrimidinase From Sinorhizobium Meliloti Length = 490

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 84/361 (23%), Positives = 131/361 (36%), Gaps = 47/361 (13%)
Query: 52  IVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP- 110
           IVT        V+++ G I+ I        N    + +D     +MPG ID H HL+ P 
Sbjct: 10  IVTADLTYKADVKVEGGRIVEIGP------NLSGAETLDATGCYVMPGGIDPHTHLEMPF 63
Query: 111 -GRTEWEGFPSXXXXXXXXXXXXLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF-- 167
            G    + F S            ++D  L S P     E L +  D    R   D  F  
Sbjct: 64  MGTYSSDDFESGTRAALAGGTTMVVDFALPS-PGQSLLEALTMW-DNKSTRANCDYSFHM 121
Query: 168 ----WGGLVPENAYNASALEALL-NAGVLGLKSFMCPSG---INDFPMTNASHIKEGLSV 219
               WG    E  +N   +E ++ + G+     FM   G   ++D  M ++      L  
Sbjct: 122 AITWWG----EQVFNE--METIVKDKGINTFXHFMAYKGALMVDDDEMFSSFQRCAALGA 175
Query: 220 LARYKRPLLVHAEM-EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD 278
           L       LVHAE  +  ++   KL  +         Y  +RP   E  A    + +A  
Sbjct: 176 LP------LVHAENGDVVAQLQAKLLAEGNSGPEAHAY--SRPAEVEGEAANRAIMIAD- 226
Query: 279 TRTDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITVETCPHYLAFSAEEIPDGD--- 335
                   G  ++IVH             A+  G  +  E    +L     E  D D   
Sbjct: 227 ------MAGCPVYIVHTSCEQAHEAIR-RARAKGMRVFGEPLIQHLTLDETEYFDKDWDH 279
Query: 336 -TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSL 394
             R   +PP R+  +++ LW  L  G + ++++DH     E K    G+F +   G   L
Sbjct: 280 AARRVMSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGGL 339
Query: 395 Q 395
           +
Sbjct: 340 E 340

>pdb|1GKP|A Chain A, D-Hydantoinase (Dihydropyrimidinase) From Thermus Sp. In Space Group C2221 Length = 458

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 122/321 (38%), Gaps = 32/321 (9%)
Query: 87  QVVDYGEAVIMPGLIDVHAHLDDPGRTEW--EGFPSXXXXXXXXXXXXLIDM--PLNSDP 142
           +V+D     + PG ID H H+  P    +  +   +             I+M  P  +D 
Sbjct: 41  EVIDATGKYVFPGFIDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMCCPSRNDD 100
Query: 143 STISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPS-- 200
           +    E  +L    AE   Y D  F   +   +      L  ++  G+     F+     
Sbjct: 101 AL---EGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIVADGISSFXIFLSYKNF 157
Query: 201 -GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKT 259
            G++D  M     + + L V+      +  H E    +E   +L+   L           
Sbjct: 158 FGVDDGEMYQTLRLAKELGVI------VTAHCE---NAELVGRLQQKLLSEGKTG----- 203
Query: 260 RPPSWEEAAIRELLTVAKDTR--TDGPAEGAHLHIVHXXXXXXXXXXXMEAKTNGDSITV 317
             P W E +  E +      R  T     GA  ++VH           M AK  G  I +
Sbjct: 204 --PEWHEPSRPEAVEAEGTARFATFLETTGATGYVVHLSCKPALDAA-MAAKARGVPIYI 260
Query: 318 ETC-PHYL--AFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVP 374
           E+  PH+L     AE       ++  +PP+RD  N++ LW+AL  G ID + +DH P   
Sbjct: 261 ESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFDT 320
Query: 375 ELKLLDEGNFLKAWGGISSLQ 395
           E KLL +  F     GI +++
Sbjct: 321 EQKLLGKEAFTAIPNGIPAIE 341

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	399
3hm7_A	448	Allantoinase; metallo-dependent hydrolase, protein	1e-139
3e74_A	473	Allantoinase; (beta/alpha)8-barrel domain, small b	1e-134
1gkr_A	458	Hydantoinase, non-ATP dependent L-selective hydant	1e-117
1nfg_A	457	D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2	1e-106
3sfw_A	461	Dihydropyrimidinase; hydrolase, zinc binding; HET:	1e-100
2gwn_A	452	Dihydroorotase; zinc-binding prote structural geno	1e-100
1gkp_A	458	Hydantoinase; hydrolase, dihydropyrimidinase, cycl	7e-99
2vr2_A	541	Dihydropyrimidinase; hydantoinase, metal-binding,	2e-98
3dc8_A	490	Dihydropyrimidinase; TIM-barrel, hydrolase; HET: K	2e-97
2vm8_A	501	Dihydropyrimidinase-related protein 2; neurogenesi	4e-95
2ftw_A	521	Dihydropyrimidine amidohydrolase; (beta-alpha)8-ba	4e-94
2fty_A	559	Dihydropyrimidinase; alpha/beta barrel, beta-sandw	7e-85
3gri_A	424	Dihydroorotase, dhoase; hydrolase, IDP00795, metal	2e-53
3mpg_A	428	Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus	6e-53
2z00_A	426	Dihydroorotase; zinc binding protein, hydrolase, m	2e-52
1xrt_A	467	Dihydroorotase, dhoase; amidohydrolase, metalloenz	4e-51
2vun_A	386	Enamidase; nicotinate degradation, binuclear metal	7e-22
4ubp_C	570	Protein (urease (chain C)); bacillus pasteurii, ni	2e-18
1onw_A	390	Isoaspartyl dipeptidase; amidohydrolase, hydrolase	2e-17
1e9y_B	569	Urease subunit beta; hydrolase, dodecamer; HET: KC	4e-15
1ejx_C	567	Urease alpha subunit; alpha-beta barrel, nickel me	7e-15
2ics_A	379	Adenine deaminase; TIM barrel, binuclear zinc, ade	8e-14
1yrr_A	382	N-acetylglucosamine-6-phosphate deacetylase; (beta	1e-12
3iv8_A	381	N-acetylglucosamine-6-phosphate deacetylase; IDP01	2e-10
2vhl_A	396	N-acetylglucosamine-6-phosphate deacetylase; N- ac	6e-10
2z26_A	347	Dihydroorotase, dhoase; TIM barrel, hydrolase; HET	1e-08
3be7_A	408	Zn-dependent arginine carboxypeptidase; unknown so	2e-08
2r8c_A	426	Putative amidohydrolase; unknown source, sargasso	2e-08
3v7p_A	427	Amidohydrolase family protein; iron binding site,	5e-08
2imr_A	420	Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2,	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-08
3feq_A	423	Putative amidohydrolase; unknown source, sargasso	8e-08
4dzh_A	472	Amidohydrolase; adenosine deaminase, nysgrc, struc	1e-07
2ood_A	475	BLR3880 protein; PSI-II, PSI-2, guanine deaminase,	2e-07
2qs8_A	418	XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p	3e-07
3gnh_A	403	L-lysine, L-arginine carboxypeptidase CC2672; N-me	4e-07
2q09_A	416	Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio	6e-07
2ogj_A	417	Dihydroorotase; TIM barrel, binuclear zinc, imidaz	1e-06
2puz_A	419	Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino	1e-06
3ggm_A	81	Uncharacterized protein BT9727_2919; bacillus cere	2e-06
2bb0_A	421	Imidazolonepropionase; TIM barrel, hydrolase; 2.00	2e-06
2p9b_A	458	Possible prolidase; protein structure initiative I	2e-06
4dyk_A	451	Amidohydrolase; adenosine deaminase, nysgrc, struc	2e-06
1o12_A	376	N-acetylglucosamine-6-phosphate deacetylase; struc	3e-06
4f0r_A	447	5-methylthioadenosine/S-adenosylhomocysteine DEAM;	3e-06
3nqb_A	608	Adenine deaminase 2; PSI-II, structural genomics,	3e-06
2i9u_A	439	Cytosine/guanine deaminase related protein; protei	4e-06
3lnp_A	468	Amidohydrolase family protein OLEI01672_1_465; TIM	1e-05
3ooq_A	396	Amidohydrolase; structural genomics, protein struc	2e-05
1p1m_A	406	Hypothetical protein TM0936; putative metal depend	2e-05
3ls9_A	456	Triazine hydrolase; atrazine chlorohydrolase TRZN;	2e-05
3h4u_A	479	Amidohydrolase; signature of Zn ligands, structura	3e-05
2qt3_A	403	N-isopropylammelide isopropyl amidohydrolase; N-is	4e-05
3icj_A	534	Uncharacterized metal-dependent hydrolase; structu	6e-05
2paj_A	492	Putative cytosine/guanine deaminase; NYSGXRC, PSI-	1e-04
1ra0_A	430	Cytosine deaminase; alpha-beta barrel, hexamer, co	1e-04

>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans} Length = 448

 Score =  403 bits (1038), Expect = e-139
 Identities = 128/352 (36%), Positives = 183/352 (51%), Gaps = 22/352 (6%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAH 106
           + S  +VT        V I+ G + +I        +      +D     + PG++DVH H
Sbjct: 10  IRSSTVVTETTTYRADVAIRNGIVSAITEPGSISSDDG--PAIDGTGLHLFPGMVDVHVH 67

Query: 107 LDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVG 166
            ++PGRTEWEGF SG+K+ AAGG+TT  DMPLNS+P TI+ E L  K   A ++  VD  
Sbjct: 68  FNEPGRTEWEGFASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYR 127

Query: 167 FWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP 226
           FWGGLVP    N   L+ L + GV+G K+FM   G +DF  ++   + +G+  +A     
Sbjct: 128 FWGGLVPG---NIDHLQDLHDGGVIGFKAFMSECGTDDFQFSHDETLLKGMKKIAALGSI 184

Query: 227 LLVHAEME---KGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283
           L VHAE              E       +   Y + RP   E  A+  +L  A+ T    
Sbjct: 185 LAVHAESNEMVNALTTIAIEEQRL----TVKDYSEARPIVSELEAVERILRFAQLT---- 236

Query: 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPP 343
                 +HI H+S     L  + +AK  G +++VETCPHYL FS +E  +     KCAPP
Sbjct: 237 ---CCPIHICHVSSR-KVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPP 292

Query: 344 IRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           +R+    E LW+ LM G ID++SSDHSP++P++K        + WGGI+  Q
Sbjct: 293 LRERQEVEDLWDGLMAGEIDLISSDHSPSLPQMK--TGKTIFEVWGGIAGCQ 342

>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli} Length = 473

 Score =  391 bits (1008), Expect = e-134
 Identities = 125/352 (35%), Positives = 181/352 (51%), Gaps = 30/352 (8%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            ++         + +K G I +I  +          +V+D    V+ PG++D H H+ +P
Sbjct: 31  TVILENEARVVDIAVKGGKIAAIGQDL-----GDAKEVMDASGLVVSPGMVDAHTHISEP 85

Query: 111 GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG 170
           GR+ WEG+ +GT+AAA GGITT+I+MPLN  P+T+   +++LK DAA+ ++ +D    GG
Sbjct: 86  GRSHWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGG 145

Query: 171 LVPENAYNASALEALLNAGVLGLKSFMCPSGI----NDFPMTNASHIKEGLSVLARYKRP 226
           LV     N   L  L   GV+G K F+   G     NDF   N     +G   L    +P
Sbjct: 146 LVSY---NIDRLHELDEVGVVGFKCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQP 202

Query: 227 LLVHAEME---KGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283
           +LVH E            K E       +   Y+ +RP   E  AIR +L +AK      
Sbjct: 203 VLVHCENALICDELGEEAKREGRV----TAHDYVASRPVFTEVEAIRRVLYLAKVA---- 254

Query: 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPP 343
              G  LH+ H+S     ++ +  A+  G  IT E+CPHY     ++  +  T  KC+PP
Sbjct: 255 ---GCRLHVCHVSSP-EGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPP 310

Query: 344 IRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           IRD  N++ +WE L +G ID L SDHSP  PE+K    GN +KAWGGI+ LQ
Sbjct: 311 IRDLENQKGMWEKLFNGEIDCLVSDHSPCPPEMK---AGNIMKAWGGIAGLQ 359

>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6 Length = 458

 Score =  346 bits (891), Expect = e-117
 Identities = 96/349 (27%), Positives = 163/349 (46%), Gaps = 23/349 (6%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
           R+V+  G+    + +K+G + +I ++      S+    +D G   +MPG++D H H+ D 
Sbjct: 10  RLVSSDGITEADILVKDGKVAAISADTSDVEASR---TIDAGGKFVMPGVVDEHVHIIDM 66

Query: 111 GRT-EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169
                +  F   +++AA GGITT+I+MP  + P T + +    K   A +R+ VD   +G
Sbjct: 67  DLKNRYGRFELDSESAAVGGITTIIEMP-ITFPPTTTLDAFLEKKKQAGQRLKVDFALYG 125

Query: 170 GLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV 229
           G VP N      +  + +AG +G KS M  S    F   +   + E    +A     ++V
Sbjct: 126 GGVPGNL---PEIRKMHDAGAVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVV 182

Query: 230 HAEME---KGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAE 286
           HAE E   +  ++ +K           + Y  ++P   E  AI+  L + K+        
Sbjct: 183 HAENETIIQALQKQIKAAGGK----DMAAYEASQPVFQENEAIQRALLLQKEA------- 231

Query: 287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD 346
           G  L ++H+S+    ++L+ +A++ G  +  E+ P YL  + ++        K APP+R 
Sbjct: 232 GCRLIVLHVSNPDG-VELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRS 290

Query: 347 AANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           A    +LWE L +G ID L SDH     E K     +  KA  G   L+
Sbjct: 291 AEMNIRLWEQLENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLE 339

>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6 Length = 457

 Score =  318 bits (818), Expect = e-106
 Identities = 88/355 (24%), Positives = 142/355 (40%), Gaps = 32/355 (9%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            IVT  G+    + IK+G I  I             + +D     + PG IDVH H++  
Sbjct: 9   TIVTADGISRADLGIKDGKITQIGGAL-----GPAERTIDAAGRYVFPGGIDVHTHVETV 63

Query: 111 G--RTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168
                  + F + T AAA GG TT++D            E +      A  +  +D G+ 
Sbjct: 64  SFNTQSADTFATATVAAACGGTTTIVDFCQQD-RGHSLAEAVAKWDGMAGGKSAIDYGYH 122

Query: 169 GGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLL 228
             ++         LE L + G+   K FM   G     M +   + + L    +    ++
Sbjct: 123 IIVLDPTDSVIEELEVLPDLGITSFKVFMAYRG---MNMIDDVTLLKTLDKAVKTGSLVM 179

Query: 229 VHAE----MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGP 284
           VHAE     +   ++ V  E  T    +   +  +RPP  E  A    L +A+       
Sbjct: 180 VHAENGDAADYLRDKFVA-EGKT----APIYHALSRPPRVEAEATARALALAEIV----- 229

Query: 285 AEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD---TRFKCA 341
              A ++IVH++    SL+ +M AK+ G     ETC HYL  + E++   D    ++   
Sbjct: 230 --NAPIYIVHVT-CEESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFT 286

Query: 342 PPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQ 395
           PP R   + + LW AL +G  + +SSDH        K     +F     G   ++
Sbjct: 287 PPARAKKDHDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVE 341

>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A* Length = 461

 Score =  306 bits (785), Expect = e-100
 Identities = 91/356 (25%), Positives = 153/356 (42%), Gaps = 32/356 (8%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            +VT        V I    +++I S+          +V+D     ++PG ID H HLD P
Sbjct: 9   TVVTASDTYQADVLIDGEKVVAIGSDLQAT----DAEVIDATGYYLLPGGIDPHTHLDMP 64

Query: 111 --GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168
             G    + F +GTKAAA GG T+++D  L S         +    + A  +  +D GF 
Sbjct: 65  FGGTVTSDNFFTGTKAAAFGGTTSIVDFCLTS-KGESLHSAIATWHEKARGKAVIDYGFH 123

Query: 169 GGLVPENAYNASALEALLNA-GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPL 227
             +   N +    LE+++N  G+  LK FM         M +   + + L         +
Sbjct: 124 LMVSDANDHVLEELESVVNNEGITSLKVFMAYKN---VLMADDETLFKTLIRAKELGALV 180

Query: 228 LVHAE----MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283
            VHAE    ++  +++ +  E +T        +  TRPP  E  A    + +        
Sbjct: 181 QVHAENGDVLDYLTKQALA-EGNT----DPIYHAYTRPPEAEGEATGRAIALTALA---- 231

Query: 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD---TRFKC 340
               A L++VH+S  + ++  + EA+  G ++  ETCP YL      +   D    ++  
Sbjct: 232 ---DAQLYVVHVS-CADAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVW 287

Query: 341 APPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGISSLQ 395
           +PP+R+  N++ LW AL +G +  + SDH P      K L   +F K   G   ++
Sbjct: 288 SPPLREKWNQDVLWSALKNGILQTVGSDHCPFNFSGQKELGRRDFTKIPNGGPIIE 343

>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis} Length = 452

 Score =  305 bits (783), Expect = e-100
 Identities = 89/351 (25%), Positives = 145/351 (41%), Gaps = 28/351 (7%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTG-QVVDYGEAVIMPGLIDVHAHLDD 109
            I        G+V I    I  I+  E    ++ +  +V++     + PG ID   H  +
Sbjct: 12  LITNEGKTFPGSVMIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHFRE 71

Query: 110 PGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG 169
           PG T      S ++AA AGG+T+ +DMP N++P T   E L  K        + + GF+ 
Sbjct: 72  PGLTHKATIASESRAAVAGGVTSFMDMP-NTNPPTTMWERLLEKRQIGADTAWANYGFFF 130

Query: 170 GLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV 229
           G   +N      ++ +    V GLK F+  S  N        + +    +       +  
Sbjct: 131 GGTNDNI---DEIKRVDKHLVPGLKLFLGSSTGN----MLVDNKETLEKIFGECDLLIAT 183

Query: 230 HAE----MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPA 285
           H E    +    E +     + LD   +      R       +  E + +A+        
Sbjct: 184 HCEKEEIIRANKEHYKAKYGNDLDIHFHPLI---RSEEACYRSSAEAVELAERM------ 234

Query: 286 EGAHLHIVHLSDASSSLDLL-MEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPI 344
             A LHI+HLS     L L   +  T    IT E C H+L FS  +      R K  P I
Sbjct: 235 -NARLHILHLSTEKE-LSLFRNDIPTAQKRITSEVCVHHLWFSDTDYGRLGNRIKWNPAI 292

Query: 345 RDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           +  +++E L  A+ +G ID++++DH+P +   K   EG+ L+A  G   +Q
Sbjct: 293 KKESDREALRAAVRNGRIDIIATDHAPHLLREK---EGSCLQAASGGPLVQ 340

>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A* Length = 458

 Score =  301 bits (772), Expect = 7e-99
 Identities = 83/354 (23%), Positives = 139/354 (39%), Gaps = 29/354 (8%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            I+T        +  +   I  I    + P  ++   V+D     + PG ID H H+  P
Sbjct: 8   EIITADSRYKADIYAEGETITRIGQNLEAPPGTE---VIDATGKYVFPGFIDPHVHIYLP 64

Query: 111 GRTEW--EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168
               +  +   +G+KAA  GG TT I+M      +  + E  +L    AE   Y D  F 
Sbjct: 65  FMATFAKDTHETGSKAALMGGTTTYIEMCCP-SRNDDALEGYQLWKSKAEGNSYCDYTFH 123

Query: 169 GGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLL 228
             +   +      L  ++  G+   K F+       F   +   + + L +       + 
Sbjct: 124 MAVSKFDEKTEGQLREIVADGISSFKIFLSYKN---FFGVDDGEMYQTLRLAKELGVIVT 180

Query: 229 VHAE----MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGP 284
            H E    + +  ++ +  E  T        +  +RP + E        T  + T     
Sbjct: 181 AHCENAELVGRLQQKLLS-EGKT----GPEWHEPSRPEAVEAEGTARFATFLETT----- 230

Query: 285 AEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDT---RFKCA 341
             GA  ++VHLS    +LD  M AK  G  I +E+   +          G     ++  +
Sbjct: 231 --GATGYVVHLS-CKPALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMS 287

Query: 342 PPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           PP+RD  N++ LW+AL  G ID + +DH P   E KLL +  F     GI +++
Sbjct: 288 PPLRDKRNQKVLWDALAQGFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIE 341

>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens} Length = 541

 Score =  302 bits (775), Expect = 2e-98
 Identities = 73/354 (20%), Positives = 134/354 (37%), Gaps = 22/354 (6%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTG-QVVDYGEAVIMPGLIDVHAHLDD 109
           R+V         V +++G + ++  +   P  +  G +V+D    +++PG ID H H+  
Sbjct: 35  RVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQF 94

Query: 110 P--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF 167
           P  G    + F  GTKAA +GG T +ID  +     ++  E  +     A+ ++  D   
Sbjct: 95  PFMGSRSIDDFHQGTKAALSGGTTMIIDFAIPQKGGSL-IEAFETWRSWADPKVCCDYSL 153

Query: 168 WGGLVPENAYNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP 226
              +   +      ++ L+ + GV   K FM      D  M     + E  S        
Sbjct: 154 HVAVTWWSDQVKEEMKILVQDKGVNSFKMFMAYK---DLYMVTDLELYEAFSRCKEIGAI 210

Query: 227 LLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAE 286
             VHAE         K       T     +   RP + E  A    +T+A          
Sbjct: 211 AQVHAENGDLIAEGAKKMLALGIT-GPEGHELCRPEAVEAEATLRAITIASAV------- 262

Query: 287 GAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD----TRFKCAP 342
              L+IVH+  + S+  ++ +A+ +G  +  E     L        + +          P
Sbjct: 263 NCPLYIVHVM-SKSAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGP 321

Query: 343 PIR-DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           P+R D +  + L   L +  +    +D+       K L + +F K   G++ ++
Sbjct: 322 PLRPDPSTPDFLMNLLANDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVE 375

>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti} Length = 490

 Score =  298 bits (765), Expect = 2e-97
 Identities = 84/356 (23%), Positives = 140/356 (39%), Gaps = 35/356 (9%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            IVT        V+++ G I+ I        N    + +D     +MPG ID H HL+ P
Sbjct: 9   TIVTADLTYKADVKVEGGRIVEIGP------NLSGAETLDATGCYVMPGGIDPHTHLEMP 62

Query: 111 --GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168
             G    + F SGT+AA AGG T ++D  L S P     E L +  + + +    D  F 
Sbjct: 63  FMGTYSSDDFESGTRAALAGGTTMVVDFALPS-PGQSLLEALTMWDNKSTRA-NCDYSFH 120

Query: 169 GGLVPENAYNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPL 227
             +        + +E ++ + G+   K FM   G     M +   +       A      
Sbjct: 121 MAITWWGEQVFNEMETIVKDKGINTFKHFMAYKGA---LMVDDDEMFSSFQRCAALGALP 177

Query: 228 LVHAE----MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283
           LVHAE    + +   + +  E ++        +  +RP   E  A    + +A       
Sbjct: 178 LVHAENGDVVAQLQAKLLA-EGNS----GPEAHAYSRPAEVEGEAANRAIMIADMA---- 228

Query: 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD----TRFK 339
              G  ++IVH S    + + +  A+  G  +  E    +L     E  D D     R  
Sbjct: 229 ---GCPVYIVHTS-CEQAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRV 284

Query: 340 CAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
            +PP R+  +++ LW  L  G + ++++DH     E K    G+F +   G   L+
Sbjct: 285 MSPPFRNKLHQDSLWAGLASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGGLE 340

>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A Length = 501

 Score =  292 bits (750), Expect = 4e-95
 Identities = 78/357 (21%), Positives = 131/357 (36%), Gaps = 32/357 (8%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD-- 108
           +IV         + +++G I  I      P   K    ++    +++PG IDVH      
Sbjct: 34  KIVNDDQSFYADIYMEDGLIKQIGENLIVPGGVK---TIEAHSRMVIPGGIDVHTRFQMP 90

Query: 109 DPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168
           D G T  + F  GTKAA AGG T +ID  +  +P T          + A+ +   D    
Sbjct: 91  DQGMTSADDFFQGTKAALAGGTTMIIDHVVP-EPGTSLLAAFDQWREWADSKSCCDYSLH 149

Query: 169 GGLVPENAYNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPL 227
             +   +      +EAL+ + GV     +M      D        I E LSV+       
Sbjct: 150 VDISEWHKGIQEEMEALVKDHGVNSFLVYMAFK---DRFQLTDCQIYEVLSVIRDIGAIA 206

Query: 228 LVHAE----MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG 283
            VHAE    + +  +R + L            ++ +RP   E  A+   +T+A  T    
Sbjct: 207 QVHAENGDIIAEEQQRILDLGIT-----GPEGHVLSRPEEVEAEAVNRAITIANQT---- 257

Query: 284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD----TRFK 339
                 L+I  +  + SS +++ +A+  G  +  E     L          +      F 
Sbjct: 258 ---NCPLYITKVM-SKSSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFV 313

Query: 340 CAPPIR-DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
            +PP+  D    + L   L  G + +  S H       K + + NF     G +  +
Sbjct: 314 TSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTE 370

>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6 Length = 521

 Score =  290 bits (745), Expect = 4e-94
 Identities = 73/356 (20%), Positives = 130/356 (36%), Gaps = 30/356 (8%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            +V         V ++ G I  I    +     +  +VVD  + +++PG ID H H   P
Sbjct: 16  TVVNDDRYFKSDVLVENGIIKEISKNIEPK---EGIKVVDATDKLLLPGGIDTHTHFQLP 72

Query: 111 --GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168
             G    + F  GT+AA AGG T +ID  +         E        A++++  D    
Sbjct: 73  FMGTVSVDDFDIGTQAAVAGGTTFIIDFVIP-TRGQSLLEAYDQWKKWADEKVNCDYSLH 131

Query: 169 GGLVPENAYNASALEALLNA-GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPL 227
             +   +   +  +E L+   GV   K FM         M     +              
Sbjct: 132 VAITWWSEQVSREMEILVKERGVNSFKCFMAYKNSF---MVTDQEMYHIFKRCKELGAIA 188

Query: 228 LVHAE---MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGP 284
            VHAE   M    ++ +     T        +  +RP + E  A    + +A        
Sbjct: 189 QVHAENGDMVFEGQKKMLEMGIT----GPEGHELSRPEALEAEATNRAIVIADSV----- 239

Query: 285 AEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD----TRFKC 340
                ++IVH+  +  + D++ + +  G  +  E     L      + + D      F  
Sbjct: 240 --CTPVYIVHVQ-SIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVM 296

Query: 341 APPIR-DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
            PPIR D   K  L + L  G +D + +D+     + K + + +F K   G++ ++
Sbjct: 297 GPPIRPDPRTKGVLMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVE 352

>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A* Length = 559

 Score =  267 bits (685), Expect = 7e-85
 Identities = 79/407 (19%), Positives = 143/407 (35%), Gaps = 82/407 (20%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            I T   + +  + +  G +  I +  D    S+   V+D   A I PG ID H H+D+P
Sbjct: 11  IICTASDIYAAEIAVNNGKVQLIAASIDPSLGSE---VIDAEGAFITPGGIDAHVHVDEP 67

Query: 111 GRTEWEG---FPSGTKAAAAGGITTLIDMPLN----SDPSTISTETLKLKVDAAEKRIYV 163
            +   +        T++A AGG TT++           PS ++        + +E+ +Y 
Sbjct: 68  LKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQTLYC 127

Query: 164 DVGFWGGLVPENAYNASALE--------ALLNAGVLGLKSFMCPSGINDFPMTNASHIKE 215
           D G    L      +  A E        A  + GV  +K FM   G+      +   I  
Sbjct: 128 DYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPGL----QISDYDIMS 183

Query: 216 GLSVLARYKRPLLVHAE----MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRE 271
            +    +     ++HAE    ++   E   + +  T        +  +RP   E  A   
Sbjct: 184 AMYATRKNGFTTMLHAENGDMVKWMIEALEE-QGLT----DAYYHGVSRPSIVEGEATNR 238

Query: 272 LLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE-- 329
            +T+A             +  VH+S +  + +++ +A+T G  +  ETCP Y   S    
Sbjct: 239 AITLATTM-------DTPILFVHVS-SPQAAEVIKQAQTKGLKVYAETCPQYALLSDAIT 290

Query: 330 ----------------------------EIPDGDTRFKCAPPIRDAANKEKLWEALMDGH 361
                                       +     +++ C+PPIR    ++ +W+ + +G 
Sbjct: 291 RCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGT 350

Query: 362 IDMLSSDHSPTVPELK-------------LLDEGNFLKAWGGISSLQ 395
             ++ SDH       K                 G F     G+  + 
Sbjct: 351 FTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVC 397

>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp} Length = 424

 Score =  181 bits (463), Expect = 2e-53
 Identities = 90/363 (24%), Positives = 147/363 (40%), Gaps = 61/363 (16%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
           +++    +    + I    I  I    +         ++D     + PG +DVH HL +P
Sbjct: 8   KVLQNGELQQADILIDGKVIKQIAPAIEPSNGV---DIIDAKGHFVSPGFVDVHVHLREP 64

Query: 111 GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV----- 165
           G    E   +GTKAAA GG TT+  MP N+ P   S E  +      +    V V     
Sbjct: 65  GGEYKETIETGTKAAARGGFTTVCPMP-NTRPVPDSVEHFEALQKLIDDNAQVRVLPYAS 123

Query: 166 ---GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND-FPMTNASHIKEGLSVLA 221
                 G  + +         AL+  G             +D   +  AS + EG+   A
Sbjct: 124 ITTRQLGKELVD-------FPALVKEGAFAFT--------DDGVGVQTASMMYEGMIEAA 168

Query: 222 RYKRPLLVHAEMEKGSERHVKLEDDTL--------DTRSYSTYLKTRPPSWEEAAI-REL 272
           +  + ++ H E            D++L          RS    +   P   E   I R++
Sbjct: 169 KVNKAIVAHCE------------DNSLIYGGAMHEGKRSKELGIPGIPNICESVQIARDV 216

Query: 273 LTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP 332
           L +A+         G H H+ H+S   S + ++ +AK  G  +T E  PH+L  + ++IP
Sbjct: 217 L-LAEAA-------GCHYHVCHVSTKES-VRVIRDAKRAGIHVTAEVTPHHLLLTEDDIP 267

Query: 333 DGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGIS 392
             +  +K  PP+R   ++E L E L+DG ID +++DH+P   + K        KA  GI 
Sbjct: 268 GNNAIYKMNPPLRSTEDREALLEGLLDGTIDCIATDHAPHARDEKAQP---MEKAPFGIV 324

Query: 393 SLQ 395
             +
Sbjct: 325 GSE 327

>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis} Length = 428

 Score =  181 bits (461), Expect = 6e-53
 Identities = 94/370 (25%), Positives = 155/370 (41%), Gaps = 63/370 (17%)

Query: 45  YWLTSKRIVTPKGVISGA-VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDV 103
           Y   + R +  +G I    + +++G I  +         +   +V+D    +I PGL+DV
Sbjct: 3   YLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENIT----ADNAEVIDVNGKLIAPGLVDV 58

Query: 104 HAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYV 163
           H HL +PG    E   +GT AAA GG TT+  MP N+ P     E ++   +  +++ +V
Sbjct: 59  HVHLREPGGEHKETIETGTLAAAKGGFTTICAMP-NTRPVPDCREHMEDLQNRIKEKAHV 117

Query: 164 DV--------GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND-FPMTNASHIK 214
           +V           G  + +        E L   G             +D   + +AS + 
Sbjct: 118 NVLPYGAITVRQAGSEMTD-------FETLKELGAFAFT--------DDGVGVQDASMML 162

Query: 215 EGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTL--------DTRSYSTYLKTRPPSWEE 266
             +   A+    ++ H E            ++TL           S    L   P   E 
Sbjct: 163 AAMKRAAKLNMAVVAHCE------------ENTLINKGCVHEGKFSEKHGLNGIPSVCES 210

Query: 267 AAI-RELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA 325
             I R++L +A+           H H+ H+S   S + ++ +AK  G  +T E  PH+L 
Sbjct: 211 VHIARDIL-LAEAA-------DCHYHVCHVSTKGS-VRVIRDAKRAGIKVTAEVTPHHLV 261

Query: 326 FSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFL 385
              ++IP  D  FK  PP+R   + E L E L+DG IDM+++DH+P   E K        
Sbjct: 262 LCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDGTIDMIATDHAPHTAEEKAQG---IE 318

Query: 386 KAWGGISSLQ 395
           +A  GI+  +
Sbjct: 319 RAPFGITGFE 328

>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus} Length = 426

 Score =  179 bits (457), Expect = 2e-52
 Identities = 106/369 (28%), Positives = 152/369 (41%), Gaps = 60/369 (16%)

Query: 46  WLTSKRIVTPKGVIS-GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVH 104
            + + R+V  +G      V I EG I+S+   E         QVVD     + PG +D+H
Sbjct: 3   LIRNVRLVDARGERGPADVLIGEGRILSLEGGEA-------KQVVDGTGCFLAPGFLDLH 55

Query: 105 AHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD 164
           AHL +PG    E   SG  AA  GG T L+ MP N+ P   + E ++   + A+      
Sbjct: 56  AHLREPGEEVKEDLFSGLLAAVRGGYTDLVSMP-NTKPPVDTPEAVRALKEKAKALGLAR 114

Query: 165 V--------GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND-FPMTNASHIKE 215
           +           G  +            L  AG + L         +D     +A  +  
Sbjct: 115 LHPAAALTEKQEGKTLTP-------AGLLREAGAVLLT--------DDGRTNEDAGVLAA 159

Query: 216 GLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR------SYSTY--LKTRPPSWEEA 267
           GL + A    P+ VHAE            D  L           +    L   PP  E A
Sbjct: 160 GLLMAAPLGLPVAVHAE------------DAGLRRNGVMNDGPLADLLGLPGNPPEAEAA 207

Query: 268 AI-RELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAF 326
            I R+L  +    R         LH+ HLS     L+L+ EAK  G  +T E  PH+L  
Sbjct: 208 RIARDLEVLRYALRR--SPATPRLHVQHLSTKRG-LELVREAKRAGLPVTAEATPHHLTL 264

Query: 327 SAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLK 386
           + E +   D  FK APP+R   ++E L E L+DG +D +++DH+P     K  D    L+
Sbjct: 265 TEEALRTFDPLFKVAPPLRGEEDREALLEGLLDGTLDAIATDHAPHTLAEKEKD---LLR 321

Query: 387 AWGGISSLQ 395
           A  GI SL+
Sbjct: 322 APFGIPSLE 330

>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A* Length = 467

 Score =  176 bits (450), Expect = 4e-51
 Identities = 91/364 (25%), Positives = 154/364 (42%), Gaps = 64/364 (17%)

Query: 51  RIVTPKGVIS--GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD 108
            ++ P   +     + ++ G I  I             +++D    ++ PG ID+H HL 
Sbjct: 55  YVIDPSQNLEGEFDILVENGKIKKIDKNIL----VPEAEIIDAKGLIVCPGFIDIHVHLR 110

Query: 109 DPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV--- 165
           DPG+T  E   SG++ A AGG TT++ MP N++P   +T  +   +  ++      V   
Sbjct: 111 DPGQTYKEDIESGSRCAVAGGFTTIVCMP-NTNPPIDNTTVVNYILQKSKSVGLCRVLPT 169

Query: 166 -----GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND-FPMTNASHIKEGLSV 219
                G  G  + +         +L  AG +           +D  P+ ++S +++ L +
Sbjct: 170 GTITKGRKGKEIAD-------FYSLKEAGCVAFT--------DDGSPVMDSSVMRKALEL 214

Query: 220 LARYKRPLLVHAEMEKGSERHVKLEDDTL-------DTRSYSTYLKTRPPSWEEAAI-RE 271
            ++   P++ H E            DD L          S    L +R P  EE  I R+
Sbjct: 215 ASQLGVPIMDHCE------------DDKLAYGVINEGEVSALLGLSSRAPEAEEIQIARD 262

Query: 272 LLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI 331
            + +A+ T       G H+HI H+S   S L+++   K  G  IT E  P++L F+  E+
Sbjct: 263 GI-LAQRT-------GGHVHIQHVSTKLS-LEIIEFFKEKGVKITCEVNPNHLLFTEREV 313

Query: 332 PDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGI 391
            +     +  PP+R   ++  L E +  G ID  ++DH+P     K L       A  GI
Sbjct: 314 LNSGANARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEKEL----VEFAMPGI 369

Query: 392 SSLQ 395
             LQ
Sbjct: 370 IGLQ 373

>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri} Length = 386

 Score = 95.4 bits (237), Expect = 7e-22
 Identities = 40/277 (14%), Positives = 81/277 (29%), Gaps = 32/277 (11%)

Query: 51  RIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAH 106
           +IV+       + +  + +++G I +I  EE          ++D   + + PGL+D H H
Sbjct: 11  KIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMKDAGDA-TIIDAAGSTVTPGLLDTHVH 69

Query: 107 LDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIS----TETLKLKVDAAEKRIY 162
           +        +       +A  GG+TT+I       P            K       K  Y
Sbjct: 70  VSGGDYAPRQKTMDFISSALHGGVTTMISAG---SPHFPGRPKDAAGTKALAITLSKSYY 126

Query: 163 VDV-----GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 217
                      G ++ E          +   GV  +        I +            +
Sbjct: 127 NARPAGVKVHGGAVILEKGLTEEDFIEMKKEGVWIVGEVG-LGTIKNPED-----AAPMV 180

Query: 218 SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277
               ++   + +H              DD + T+          P     +++E+  +  
Sbjct: 181 EWAHKHGFKVQMHTGGTSIPGSSTVTADDVIKTKPDVVSHINGGP--TAISVQEVDRIMD 238

Query: 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDS 314
           +T          + IV   +   +  +   A   G  
Sbjct: 239 ET-------DFAMEIVQCGNPKIADYVARRAAEKGQL 268

>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C* Length = 570

 Score = 86.6 bits (214), Expect = 2e-18
 Identities = 60/342 (17%), Positives = 106/342 (30%), Gaps = 63/342 (18%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEE--DWPRNSKTGQVVDYGEAVI-------M 97
           LT+  I+   G+    + +K+G I+ I      D         +V     VI        
Sbjct: 71  LTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVT 130

Query: 98  PGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET------LK 151
            G ID H H  +         P     A A GITTL          + +T        ++
Sbjct: 131 AGGIDTHVHFIN---------PDQVDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIE 181

Query: 152 LKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNAS 211
             + + E  + ++VG  G     +  + + +   ++AG  GLK         D+  T A 
Sbjct: 182 KMLKSTE-GLPINVGILGKG---HGSSIAPIMEQIDAGAAGLKIHE------DWGATPA- 230

Query: 212 HIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRE 271
            I   L+V       + +H++    +       +DTL   +            E A    
Sbjct: 231 SIDRSLTVADEADVQVAIHSD----TLNEAGFLEDTLRAINGRV---IHSFHVEGAGGGH 283

Query: 272 LLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE-- 329
              +           G    +   ++           +    +   E     +       
Sbjct: 284 APDIMAMA-------GHPNVLPSSTNP---------TRPFTVNTIDEHLDMLMVCHHLKQ 327

Query: 330 EIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP 371
            IP+ D  F  +    +    E +   L  G I M+S+D   
Sbjct: 328 NIPE-DVAFADSRIRPETIAAEDILHDL--GIISMMSTDALA 366

>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A* Length = 390

 Score = 82.1 bits (203), Expect = 2e-17
 Identities = 41/325 (12%), Positives = 93/325 (28%), Gaps = 55/325 (16%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
            +  P+      V +  G II++ S            VVD    ++ PG ID H HL   
Sbjct: 16  HLYAPEDRGICDVLVANGKIIAVASNIPSD-IVPNCTVVDLSGQILCPGFIDQHVHLIGG 74

Query: 111 GRTEWEGFPSGTKAAAA---GGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF 167
           G        +   A +     G+T+++ +   +D  +   E+L  K  A  +        
Sbjct: 75  GGEAGPTTRTPEVALSRLTEAGVTSVVGLL-GTDSISRHPESLLAKTRALNEEGISAWML 133

Query: 168 WGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPL 227
            G     +     ++E  +      +   +          + A  +    ++ A  +   
Sbjct: 134 TGAYHVPSRTITGSVEKDVAI----IDRVIGVKCAISDHRSAAPDVYHLANMAAESRVGG 189

Query: 228 LVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEG 287
           L+     K       + D                    + A++ +  + ++         
Sbjct: 190 LLG---GKPGVTVFHMGD-------------------SKKALQPIYDLLENCDV----PI 223

Query: 288 AHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA 347
           + L   H++      +  +E    G +I + +                       P+  A
Sbjct: 224 SKLLPTHVNRNVPLFEQALEFARKGGTIDITS-------------------SIDEPVAPA 264

Query: 348 -ANKEKLWEALMDGHIDMLSSDHSP 371
                 +   +    + + S  +  
Sbjct: 265 EGIARAVQAGIPLARVTLSSDGNGS 289

>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C* Length = 569

 Score = 76.2 bits (187), Expect = 4e-15
 Identities = 73/351 (20%), Positives = 111/351 (31%), Gaps = 81/351 (23%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEE--DWPRNSKTGQVVDYGEAVI-------M 97
           +T+  IV   G+    + IK+G I  I      D     K    V      +        
Sbjct: 70  ITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVT 129

Query: 98  PGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIST------ETLK 151
            G ID H H            P     A A G+TT+I         T +T        LK
Sbjct: 130 AGGIDTHIHFIS---------PQQIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLK 180

Query: 152 LKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNAS 211
             + AAE+   +++GF       NA N ++L   + AG +G K         D+  T  S
Sbjct: 181 WMLRAAEE-YSMNLGFLA---KGNASNDASLADQIEAGAIGFKIHE------DWG-TTPS 229

Query: 212 HIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRE 271
            I   L V  +Y   + +H               DTL+                EA   E
Sbjct: 230 AINHALDVADKYDVQVAIH--------------TDTLN----------------EAGCVE 259

Query: 272 LLTVAKDTR------TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA 325
               A   R      T+G   G    I+ ++   + L       T   ++  E     + 
Sbjct: 260 DTMAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPAS-TNPTIPFTVNTEAEHMDML 318

Query: 326 FSAE----EIPDGDTRFKCAPPIRD-AANKEKLWEALMDGHIDMLSSDHSP 371
                    I + D +F  +       A ++ L +    G   + SSD   
Sbjct: 319 MVCHHKDKSIKE-DVQFADSRIRPQTIAAEDTLHD---MGAFSITSSDSQA 365

>1ejx_C Urease alpha subunit; alpha-beta barrel, nickel metalloenzyme, temperature depende structural changes, hydrolase; HET: KCX; 1.60A {Klebsiella aerogenes} SCOP: b.92.1.1 c.1.9.2 PDB: 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1ef2_A* 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1ejr_C* 1krc_C 1krb_C* 1fwi_C* 1fwa_C* 1fwb_C* 1fwc_C* 1fwd_C* 1fwe_C* 1fwg_C* 1a5k_C ... Length = 567

 Score = 75.1 bits (184), Expect = 7e-15
 Identities = 61/338 (18%), Positives = 105/338 (31%), Gaps = 57/338 (16%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVI-------MPG 99
           LT+  IV   G++   + +K+G I +I    +          +     VI         G
Sbjct: 70  LTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAG 129

Query: 100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLID---MPLNSDPSTISTE--TLKLKV 154
            ID H H   P + E          A   G+TT++     P     +T  T       ++
Sbjct: 130 GIDTHIHWICPQQAEE---------ALVSGVTTMVGGGTGPAAGTHATTCTPGPWYISRM 180

Query: 155 DAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIK 214
             A   + V++G  G     N     AL   + AGV+GLK                + I 
Sbjct: 181 LQAADSLPVNIGLLGKG---NVSQPDALREQVAAGVIGLKIHEDWGATP-------AAID 230

Query: 215 EGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLT 274
             L+V       + +H++    +       +DTL      T               +++T
Sbjct: 231 CALTVADEMDIQVALHSD----TLNESGFVEDTLAAIGGRTIHTFHTEGAGGGHAPDIIT 286

Query: 275 VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG 334
                    P          L    +++D  ++            C H     AE++   
Sbjct: 287 ACAH-----PNILPSSTNPTLPYTLNTIDEHLDMLM--------VCHHLDPDIAEDVAFA 333

Query: 335 DTRFKCAPPIRDAANKEKLWEALMD-GHIDMLSSDHSP 371
           ++R +               + L D G   + SSD   
Sbjct: 334 ESRIRRETIAA--------EDVLHDLGAFSLTSSDSQA 363

>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14 Length = 379

 Score = 71.3 bits (174), Expect = 8e-14
 Identities = 44/272 (16%), Positives = 84/272 (30%), Gaps = 29/272 (10%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP 110
           + V         + IKE  I ++ +            +       +  G ID H H  + 
Sbjct: 13  QTVNGM---PVEIAIKEKKIAAVAATISGSAKE---TIHLEPGTYVSAGWIDDHVHCFEK 66

Query: 111 GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG 170
               ++      +     G+TT+ID    +    I       +         V++  WG 
Sbjct: 67  MALYYD---YPDEIGVKKGVTTVIDAG-TTGAENIHEFYDLAQQAKTNVFGLVNISKWGI 122

Query: 171 LVPENAYNASALEALLNA--------GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR 222
           +  +   + S ++A L           V+G+K+ M  + I D  +T     K+       
Sbjct: 123 VAQDELADLSKVQASLVKKAIQELPDFVVGIKARMSRTVIGDNGITPLELAKQIQQENQE 182

Query: 223 YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE-AAIRELLTVAKDTRT 281
              PL+VH          +    +  D  ++    K      +    I++    A     
Sbjct: 183 I--PLMVHIGSAPPHLDEILALMEKGDVLTHCFNGKENGILDQATDKIKDFAWQAY---- 236

Query: 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGD 313
               +G    I H +  S +  +   A   G 
Sbjct: 237 ---NKGVVFDIGHGT-DSFNFHVAETALREGM 264

>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A* Length = 382

 Score = 67.6 bits (166), Expect = 1e-12
 Identities = 31/125 (24%), Positives = 43/125 (34%), Gaps = 20/125 (16%)

Query: 45  YWLTSKRIVTPKGVIS-GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDV 103
           Y LT  RI T    +   AV I +G I S+    + P      +      A++ PG IDV
Sbjct: 2   YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPE---IEQRSLNGAILSPGFIDV 58

Query: 104 HAH-------LDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTI--STETLKLKV 154
             +        D       E      KA    G T  +       P+ I  S E +K  V
Sbjct: 59  QLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYL-------PTLITTSDELMKQGV 111

Query: 155 DAAEK 159
               +
Sbjct: 112 RVMRE 116

>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A* Length = 381

 Score = 60.7 bits (148), Expect = 2e-10
 Identities = 27/107 (25%), Positives = 41/107 (38%), Gaps = 15/107 (14%)

Query: 45  YWLTSKRIVTPKGVIS-GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDV 103
           Y LT+ +I T   V+   AV I    I ++   E  P       VVD   A + PG ID+
Sbjct: 5   YALTNCKIYTGNDVLVKHAVIINGDKIEAVCPIESLPSE---MNVVDLNGANLSPGFIDL 61

Query: 104 HAH----LDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIS 146
             +    +        E   +  KA    G T+ +       P+ I+
Sbjct: 62  QLNGCGGVMFNDEITAETIDTMHKANLKSGCTSFL-------PTLIT 101

>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis} Length = 396

 Score = 59.6 bits (145), Expect = 6e-10
 Identities = 24/111 (21%), Positives = 45/111 (40%), Gaps = 19/111 (17%)

Query: 43  NQYWLTSKRIVTPKGVIS-GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLI 101
               +    IVT   VI  G V I +G I ++ +E   P+   + ++    ++V++PG+I
Sbjct: 3   ESLLIKDIAIVTENEVIKNGYVGINDGKISTVSTER--PKEPYSKEIQAPADSVLLPGMI 60

Query: 102 DVHAH------LDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIS 146
           D+H H        D     +      +      G T+ +        +TI+
Sbjct: 61  DIHIHGGYGADTMDA---SFSTLDIMSSRLPEEGTTSFL-------ATTIT 101

>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A* Length = 347

 Score = 55.1 bits (132), Expect = 1e-08
 Identities = 46/282 (16%), Positives = 85/282 (30%), Gaps = 54/282 (19%)

Query: 102 DVHAHLDDPGRTEWEGFP-SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR 160
           D H HL    R   +G          +      I MP N  P   + E       A  +R
Sbjct: 14  DWHLHL----R---DGDMLKTVVPYTSEIYGRAIVMP-NLAPPVTTVE----AAVAYRQR 61

Query: 161 I------YVDVGFWGGLVPENAYNASALEALLNAG-VLGLKSFMCPS-GINDFPMTNASH 212
           I        D          ++ + + LE   N G     K +   +   +   +T+   
Sbjct: 62  ILDAVPAGHDFTPLMTCYLTDSLDPNELERGFNEGVFTAAKLYPANATANSSHGVTSVDA 121

Query: 213 IKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIREL 272
           I   L  + +   PLLVH E+          E   ++                      +
Sbjct: 122 IMPVLERMEKIGMPLLVHGEVTHADIDIFDREARFIE--------------------SVM 161

Query: 273 LTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP 332
             + +            +   H++   +  D + +       +     P +L F+   + 
Sbjct: 162 EPLRQR------LTALKVVFEHITTKDA-ADYVRDGNER---LAATITPQHLMFNRNHML 211

Query: 333 DGDTR--FKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSP 371
            G  R    C P ++   +++ L E +  G     L +D +P
Sbjct: 212 VGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAP 253

>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A* Length = 408

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 23/110 (20%), Positives = 42/110 (38%), Gaps = 18/110 (16%)

Query: 40  LPYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIM 97
           L    + + SK  +  +   +I   + I+ G I  I        N+K   V+   + +++
Sbjct: 3   LTSEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIG-----KINTKDATVISIPDLILI 57

Query: 98  PGLIDVHAHL--DDPGRTEWEGFPSGTKAAAA---------GGITTLIDM 136
           PGL+D H H+  +D    E     S                 G TT+ ++
Sbjct: 58  PGLMDSHVHIVGNDSKGEESIADSSHMGTVWGVVNAEKTLMAGFTTVRNV 107

>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3mkv_A* Length = 426

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 17/111 (15%)

Query: 40  LPYNQYWLTSKRIVTPKG--VISGA-VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVI 96
           +    +   +  ++ P    ++ G  + I++G I  +  +     N     V+D     I
Sbjct: 1   MSLTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKSSN---AHVIDVKGKTI 57

Query: 97  MPGLIDVHAHL--DDPGRTEWEGFPSGTKAAAA---------GGITTLIDM 136
           MPGLID+H H+   +         P+      A          G TT+ D 
Sbjct: 58  MPGLIDLHVHVVAIEFNLPRVATLPNVLVTLRAVPIMRAMLRRGFTTVRDA 108

>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP} Length = 427

 Score = 53.4 bits (129), Expect = 5e-08
 Identities = 18/116 (15%), Positives = 36/116 (31%), Gaps = 26/116 (22%)

Query: 47  LTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAH 106
           +    I+TP+ +I       +  I +I + E+  +      V     ++++PG  + H H
Sbjct: 4   IKPFAILTPQTIIQDKAVAFDKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLH 63

Query: 107 L---------DDPGRTEW--------EG-FPS----GTKAAAA----GGITTLIDM 136
           L                W        E   P       +   +     G T +  +
Sbjct: 64  LEFSANKATLQYGDFIPWLYSVIRHREDLLPLCDGACLEQTLSSIIQTGTTAIGAI 119

>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16 Length = 420

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 21/116 (18%), Positives = 34/116 (29%), Gaps = 28/116 (24%)

Query: 46  WLTSKRIVTPKGVI--SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDV 103
            LT   + T  G     G V +    + +    ++  R        +   AVI P  ++ 
Sbjct: 40  LLTCDVLYTGMGGAQSPGGVVVVGETVAAAGHPDE-LRRQYPHAAEERAGAVIAPPPVNA 98

Query: 104 HAHLD-------------------DPGRTEWEGFPSGTKAAAA----GGITTLIDM 136
           H HLD                     GR       +  +A A      G   + D+
Sbjct: 99  HTHLDMSAYEFQALPYFQWIPEVVIRGRHLRG--VAAAQAGADTLTRLGAGGVGDI 152

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 53.7 bits (128), Expect = 7e-08
 Identities = 73/470 (15%), Positives = 136/470 (28%), Gaps = 153/470 (32%)

Query: 15  TLLAASLFLLVFKDSAKLSHSECSLLPYNQYWLTSKRIVTPKGVI--------------S 60
           T +A      V              + +  +WL  K   +P+ V+              +
Sbjct: 164 TWVALD----VCLSYKVQCK-----MDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214

Query: 61  GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE-WEGFP 119
              +      + I S +   R     +   Y   +    L+     L +    + W  F 
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSK--PYENCL----LV-----LLNVQNAKAWNAFN 263

Query: 120 SGTK----------AAAAGGITT----LIDMP---------------LNSDPSTISTETL 150
              K                 TT    L                   L+  P  +  E L
Sbjct: 264 LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVL 323

Query: 151 K-----LKVDAAEKRIYVDV-GFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND 204
                 L + A   R  +     W         N   L  ++ + +  L+    P+    
Sbjct: 324 TTNPRRLSIIAESIRDGLATWDNW------KHVNCDKLTTIIESSLNVLE----PAEYRK 373

Query: 205 -------FPMTNASHIKEG-LSVL---ARYKRPLLVHAEMEKGS--ERHVKLEDDTLDTR 251
                  FP   ++HI    LS++         ++V  ++ K S  E+  K    ++   
Sbjct: 374 MFDRLSVFP--PSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI--- 428

Query: 252 SYSTYLKTRPPSWEEAAI-RELL-------TVAKDTRTDGPAEG-AHLHIV-HLSDASSS 301
             S YL+ +     E A+ R ++       T   D       +   + HI  HL +    
Sbjct: 429 -PSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHP 487

Query: 302 ----------LDL-LMEAKTNGDSI----------TVETCPHYLAFSAEEIPDGDTRFKC 340
                     LD   +E K   DS           T++    Y  +    I D D ++  
Sbjct: 488 ERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPY----ICDNDPKY-- 541

Query: 341 APPIRDAANKEKLWEALMD-----GHIDMLSSDHSPTVPELKLLDEGNFL 385
                     E+L  A++D        +++ S ++  +  + L+ E   +
Sbjct: 542 ----------ERLVNAILDFLPKIEE-NLICSKYTDLL-RIALMAEDEAI 579

>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A* Length = 423

 Score = 52.7 bits (127), Expect = 8e-08
 Identities = 19/108 (17%), Positives = 33/108 (30%), Gaps = 17/108 (15%)

Query: 43  NQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPG 99
               L    ++  +    +    V I    I+ +        N    Q +D     +MPG
Sbjct: 4   TITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVDLPN---AQAIDVRGKTVMPG 60

Query: 100 LIDVHAHL--DDPGRTEWEGFPSGTKAAAA---------GGITTLIDM 136
            ID H H+   +         P+   A  +          G T++ D 
Sbjct: 61  FIDCHVHVLASNANLGVNATQPNILAAIRSLPILDAMLSRGFTSVRDA 108

>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV} Length = 472

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 27/122 (22%), Positives = 43/122 (35%), Gaps = 32/122 (26%)

Query: 47  LTSKRIVT--PKGVI--SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLID 102
           + +  +V   P  V+    AV +  G I++++   D        + V   +A +MPGL++
Sbjct: 18  IEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVN 77

Query: 103 VHAHL---------DDPGRTEW---------------EGFPSGTKAAAA----GGITTLI 134
            H H          DD     W               E    GT  A A    GG T + 
Sbjct: 78  AHTHNPMTLLRGVADDLPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVN 137

Query: 135 DM 136
           + 
Sbjct: 138 EN 139

>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9 Length = 475

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 21/131 (16%), Positives = 37/131 (28%), Gaps = 41/131 (31%)

Query: 61  GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL---------DDP- 110
           G + + +G I +    E         ++    + +I+PG ID H HL          +  
Sbjct: 36  GLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIVPGFIDGHIHLPQTRVLGAYGEQL 95

Query: 111 -----GRTEWEGFP------------SGTKAAAA----GGITTLIDMPLNSDPSTISTET 149
                       +P             G K         G TT          ++ S   
Sbjct: 96  LPWLQKSI----YPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAF------TSSSPVA 145

Query: 150 LKLKVDAAEKR 160
            +   + A +R
Sbjct: 146 TEELFEEASRR 156

>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18 Length = 418

 Score = 51.2 bits (123), Expect = 3e-07
 Identities = 20/108 (18%), Positives = 42/108 (38%), Gaps = 15/108 (13%)

Query: 43  NQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGL 100
           ++  + + +++  K   V S    + +GNIIS + +     ++     +D  +  ++PGL
Sbjct: 7   SKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-ISSNDFEDYIDLRDHTVLPGL 65

Query: 101 IDVHAHL---DDPGRTEWEGFPSGTKAAAA---------GGITTLIDM 136
           +D+H H                   +A  A          G TT+  +
Sbjct: 66  MDMHVHFGQEYQSKAQAPIKVEREMQAILATQHAYVTFKSGFTTVRQV 113

>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A* Length = 416

 Score = 50.2 bits (120), Expect = 6e-07
 Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 14/97 (14%)

Query: 51  RIVTPK------GVIS-GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDV 103
              T +      G++   A+ + EG I ++V  +D           D    ++ PGLID 
Sbjct: 13  TPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKG-PYPAHWQDMKGKLVTPGLIDC 71

Query: 104 HAHLDDPGRTEWE------GFPSGTKAAAAGGITTLI 134
           H HL   G    E      G P    A   GGI + +
Sbjct: 72  HTHLIFAGSRAEEFELRQKGVPYAEIARKGGGIISTV 108

>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens} Length = 417

 Score = 49.7 bits (118), Expect = 1e-06
 Identities = 24/127 (18%), Positives = 49/127 (38%), Gaps = 10/127 (7%)

Query: 51  RIVTPKGVISGAVE----IKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAH 106
           + V      S +        +G I ++ S    P +    Q +D   A I PG +D+H H
Sbjct: 23  KPVGFGKGASQSSTDILIGGDGKIAAVGSALQAPAD---TQRIDAKGAFISPGWVDLHVH 79

Query: 107 LDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVG 166
           +   G    +     ++  A  G+TTL+D     + +        ++      + ++++G
Sbjct: 80  IWHGGT---DISIRPSECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNLG 136

Query: 167 FWGGLVP 173
             G +  
Sbjct: 137 SIGLVAC 143

>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A Length = 419

 Score = 49.1 bits (117), Expect = 1e-06
 Identities = 28/115 (24%), Positives = 40/115 (34%), Gaps = 8/115 (6%)

Query: 29  SAKLSHSECSLLPYNQYWLTSKRIVTPKGVIS-GAVEIKEGNIISIVSEEDWPRNSKTG- 86
           +   +    + L  N    T    +   G +    + ++ G I     E D P +  T  
Sbjct: 7   AKGTATGNATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTAD 66

Query: 87  QVVDYGEAVIMPGLIDVHAHLDDPGRTEWE------GFPSGTKAAAAGGITTLID 135
           +  D G   I P LID H HL   G    E      G      A A GGI + + 
Sbjct: 67  ETTDCGGRWITPALIDCHTHLVFGGNRAMEFEMRLNGATYEEIAKAGGGIVSSVR 121

>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian} Length = 81

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 62  AVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL 107
           A+ I +G I ++  +E     ++  + +D      +PGL D H H+
Sbjct: 25  AIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHV 70

>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A Length = 421

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 61  GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL 107
             V I E  I+    +       +  +++D    ++ PGL+D H HL
Sbjct: 38  AVVGIHEQKIVFAGQKGAEAG-YEADEIIDCSGRLVTPGLVDPHTHL 83

>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17 Length = 458

 Score = 48.6 bits (116), Expect = 2e-06
 Identities = 12/54 (22%), Positives = 20/54 (37%)

Query: 61  GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE 114
             + +     I  V+             +D    ++MPGLI+ H HL   G+  
Sbjct: 34  MTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMPGLINAHTHLFSQGKPL 87

>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa} Length = 451

 Score = 48.3 bits (116), Expect = 2e-06
 Identities = 31/122 (25%), Positives = 46/122 (37%), Gaps = 33/122 (27%)

Query: 47  LTSKRIVT--PKGVI--SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLID 102
           L    IV   P GV+    A+ I++G I  +   E   R+  T ++ +    ++ PGL++
Sbjct: 12  LLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAMRHGAT-EIRELPGMLLAPGLVN 70

Query: 103 VHAHL---------DDPGRTEW---------------EGFPSGTKAAAA----GGITTLI 134
            H H          DD     W               +    GT+ A A    GGIT   
Sbjct: 71  AHGHSAMSLFRGLADDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFS 130

Query: 135 DM 136
           DM
Sbjct: 131 DM 132

>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10 Length = 376

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 19/80 (23%)

Query: 28  DSAKLSHSECSLLPYNQYWLTSKRIVTPKGVIS-GAVEIKEGNIISIVSEEDWPRNSKTG 86
            S K+ H    ++      +    IV P      G VEI+EG I+ +   E         
Sbjct: 2   GSDKIHHHHHHMI------VEKVLIVDPIDGEFTGDVEIEEGKIVKVEKREC-------- 47

Query: 87  QVVDYGEAVIMPGLIDVHAH 106
                   V+MPG +D H H
Sbjct: 48  ----IPRGVLMPGFVDPHIH 63

>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A* Length = 447

 Score = 48.3 bits (116), Expect = 3e-06
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 33/122 (27%)

Query: 47  LTSKRIVT--PKGVI--SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLID 102
           ++++ I+T    G +  + A+ I++G I +I+   D     +  + ++  + V+MPGLI+
Sbjct: 10  ISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAAGL-EADERLELPDHVLMPGLIN 68

Query: 103 VHAHL---------DDPGRTEW---------------EGFPSGTKAAAA----GGITTLI 134
           +H H          DD    +W               +    G+  A      GG TT+ 
Sbjct: 69  LHGHSAMSLLRGLADDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTIN 128

Query: 135 DM 136
           DM
Sbjct: 129 DM 130

>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A Length = 608

 Score = 48.1 bits (114), Expect = 3e-06
 Identities = 34/163 (20%), Positives = 57/163 (34%), Gaps = 19/163 (11%)

Query: 51  RIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD 108
            +V      +    + I    I S+             QV+D G A + PGLID H H++
Sbjct: 43  TLVDVVTGELRPADIGIVGALIASVHEPASRRDA---AQVIDAGGAYVSPGLIDTHMHIE 99

Query: 109 DPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW 168
               T    +     A  A G+TT++  P     +    + ++    A E      +   
Sbjct: 100 SSMIT-PAAY---AAAVVARGVTTIVWDPH-EFGNVHGVDGVRWAAKAIENLPLRAILLA 154

Query: 169 GGLVPENAY--------NASALEALLNAG-VLGLKSFMCPSGI 202
              VP            +A+ L  LL+   + G+   M   G+
Sbjct: 155 PSCVPSAPGLERGGADFDAAILADLLSWPEIGGIAEIMNMRGV 197

>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9 Length = 439

 Score = 47.6 bits (114), Expect = 4e-06
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 2/47 (4%)

Query: 61  GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL 107
             + + +G I S+    + P   K   ++D+   +I+PG+ D+HAH 
Sbjct: 32  SYIVVIDGKIASV--SSNLPDKYKGNPIIDFRNNIIIPGMNDLHAHA 76

>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica} Length = 468

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 26/141 (18%), Positives = 46/141 (32%), Gaps = 34/141 (24%)

Query: 28  DSAKLSHSECSLLPYNQYWLT---SKRIVTPKGVIS-GAVEIKEGNIISIVSEEDWPRNS 83
                  +   L   + + +    +        ++    + IK+G I++I  +      +
Sbjct: 14  QRQSQPKAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSCQIPA 73

Query: 84  KTGQVVDYGEAVIMPGLIDVHAHL---------DDPGRTEW---------------EGFP 119
              + +D G+ V+MPG ++ H H          DD     W                   
Sbjct: 74  T--ETLDLGQQVLMPGWVNAHGHAAMSLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVK 131

Query: 120 SGTKAAAA----GGITTLIDM 136
            GT+ A A     G TT  DM
Sbjct: 132 QGTELAIAEMIQSGTTTFADM 152

>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima} Length = 396

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 44/288 (15%), Positives = 89/288 (30%), Gaps = 59/288 (20%)

Query: 51  RIVT-PKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD 109
            +         G V +  G +  +    + P      ++VD     + PG +D H+H+  
Sbjct: 13  TVFPITSRPFKGDVLVSNGKVEKVGENIEDP----DAEIVDLTGKFLFPGFVDAHSHI-- 66

Query: 110 PGRTEWEGFPSGT--------------------------KAAAAGGITTLIDMPLNSDPS 143
            G  E       +                          + A AGG+T+++ +P +++P 
Sbjct: 67  -GLFEEGVGYYYSDGNEATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVPGSANPV 125

Query: 144 TISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIN 203
                 +K +    E+ I   V    GL                 G    + +       
Sbjct: 126 GGQGSVIKFRSIIVEECI---VKDPAGLKM-------------AFGENPKRVYGERKQTP 169

Query: 204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPS 263
              M  A  I++  + +  Y +   +    ++G E         +        +  R  +
Sbjct: 170 STRMGTAGVIRDYFTKVKNYMKKKELA--QKEGKEFTETDLKMEVGEMVLRKKIPARMHA 227

Query: 264 WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTN 311
                I   + +A++        G +L I H ++A     +L E K  
Sbjct: 228 HRADDILTAIRIAEEF-------GFNLVIEHGTEAYKISKVLAEKKIP 268

>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A Length = 406

 Score = 45.6 bits (109), Expect = 2e-05
 Identities = 24/106 (22%), Positives = 34/106 (32%), Gaps = 34/106 (32%)

Query: 58  VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL---------D 108
              GAVEI+ G I  ++  E           +D    ++MP L + H H          +
Sbjct: 16  PFWGAVEIENGTIKRVLQGEV-------KVDLDLSGKLVMPALFNTHTHAPMTLLRGVAE 68

Query: 109 DPGRTEW--------------EGFPSGTKAAAA----GGITTLIDM 136
           D    EW              +    GT  A       GI   +DM
Sbjct: 69  DLSFEEWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDM 114

>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A* Length = 456

 Score = 45.3 bits (108), Expect = 2e-05
 Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 46/167 (27%)

Query: 61  GAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL-----------DD 109
             + I    I+++  +          + +D    + +PGLI+ H HL           + 
Sbjct: 23  ADILIDGPKIVAVGKDLSDRS---VSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLER 79

Query: 110 PGRTEW--------EGFPS-----------GTKAAAA----GGITTLIDMPLNSDPSTIS 146
                W         G+               +A       GGITT+ D      P   +
Sbjct: 80  VTMASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQ-HLFFPGATA 138

Query: 147 TETLKLKVDAAEK--------RIYVDVGFWGGLVPENAYNASALEAL 185
              +   ++AA          R  + +G   G   ++ +       +
Sbjct: 139 DSYIDATIEAATDLGIRFHAARSSMTLGKSEGGFCDDLFVEPVDRVV 185

>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP} Length = 403

 Score = 44.5 bits (105), Expect = 4e-05
 Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 11/81 (13%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD-- 108
            +     V    + I    II I ++ +          +D    ++ PG +D H H+D  
Sbjct: 13  YLSEKDSVYD--IGIVGDRIIKIEAKIEGT----VKDEIDAKGNLVSPGFVDAHTHMDKS 66

Query: 109 ---DPGRTEWEGFPSGTKAAA 126
                 R         T+ AA
Sbjct: 67  FTSTGERLPKFWSRPYTRDAA 87

>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X* Length = 534

 Score = 44.2 bits (105), Expect = 6e-05
 Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 8/109 (7%)

Query: 13  TLTLLAASLFLLVFKDSAKLSHSECSLLPYNQYW----LTSKRIVT--PKGVISGAVEIK 66
           +L  L  S F      S   +  +  +   +       L +  I T          + I 
Sbjct: 2   SLASLPISNFFTFNHQSTLFTKVKNFMGVKHIGDCMKALINGTIYTSFSPVKKVSGLVIS 61

Query: 67  EGNIISIVSEEDWPRNSKTG--QVVDYGEAVIMPGLIDVHAHLDDPGRT 113
              ++         R ++    +++D     +MP   D H HLD+ G +
Sbjct: 62  NERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLDELGMS 110

>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9 Length = 492

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 24/131 (18%), Positives = 35/131 (26%), Gaps = 36/131 (27%)

Query: 38  SLLPYNQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEA 94
           S L  N   + +    T      V    + I    I +I +    P       +VD  + 
Sbjct: 11  STLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAPRP----GETIVDATDC 66

Query: 95  VIMPGLIDVHAHL-----------DDPGRTEW--------------EGFPSGTKAAAA-- 127
           VI P  ++ H HL            D   T W                F    +      
Sbjct: 67  VIYPAWVNTHHHLFQSLLKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIEL 126

Query: 128 --GGITTLIDM 136
              G  T+ D 
Sbjct: 127 ARSGCATVADH 137

>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A Length = 430

 Score = 42.7 bits (100), Expect = 1e-04
 Identities = 10/46 (21%), Positives = 24/46 (52%), Gaps = 2/46 (4%)

Query: 63  VEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD 108
           + +++G I +I ++        T   +D  + +++P  ++ H HLD
Sbjct: 26  IHLQDGKISAIDAQSGVM--PITENSLDAEQGLVIPPFVEPHIHLD 69

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	399
3dc8_A	490	Dihydropyrimidinase; TIM-barrel, hydrolase; HET: K	100.0
3sfw_A	461	Dihydropyrimidinase; hydrolase, zinc binding; HET:	100.0
3e74_A	473	Allantoinase; (beta/alpha)8-barrel domain, small b	100.0
3gri_A	424	Dihydroorotase, dhoase; hydrolase, IDP00795, metal	100.0
3hm7_A	448	Allantoinase; metallo-dependent hydrolase, protein	100.0
3mpg_A	428	Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus	100.0
2fty_A	559	Dihydropyrimidinase; alpha/beta barrel, beta-sandw	100.0
3pnu_A	359	Dihydroorotase; TIM barrel, zinc binding, hydrolas	100.0
1gkp_A	458	Hydantoinase; hydrolase, dihydropyrimidinase, cycl	100.0
2ftw_A	521	Dihydropyrimidine amidohydrolase; (beta-alpha)8-ba	100.0
2vr2_A	541	Dihydropyrimidinase; hydantoinase, metal-binding,	100.0
1gkr_A	458	Hydantoinase, non-ATP dependent L-selective hydant	100.0
1nfg_A	457	D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2	100.0
2z00_A	426	Dihydroorotase; zinc binding protein, hydrolase, m	100.0
2z26_A	347	Dihydroorotase, dhoase; TIM barrel, hydrolase; HET	100.0
2vm8_A	501	Dihydropyrimidinase-related protein 2; neurogenesi	100.0
2gwn_A	452	Dihydroorotase; zinc-binding prote structural geno	100.0
1xrt_A	467	Dihydroorotase, dhoase; amidohydrolase, metalloenz	100.0
3gip_A	480	N-acyl-D-glutamate deacylase; amidohydrolase famil	100.0
1rk6_A	496	D-aminoacylase; TIM barrel, beta barrel, insertion	99.97
1e9y_B	569	Urease subunit beta; hydrolase, dodecamer; HET: KC	99.96
3be7_A	408	Zn-dependent arginine carboxypeptidase; unknown so	99.92
1ra0_A	430	Cytosine deaminase; alpha-beta barrel, hexamer, co	99.92
2r8c_A	426	Putative amidohydrolase; unknown source, sargasso	99.92
2ics_A	379	Adenine deaminase; TIM barrel, binuclear zinc, ade	99.91
3feq_A	423	Putative amidohydrolase; unknown source, sargasso	99.91
2vun_A	386	Enamidase; nicotinate degradation, binuclear metal	99.91
4ac7_C	570	Urease subunit alpha; hydrolase, bacillus pasteuri	99.91
4ubp_C	570	Protein (urease (chain C)); bacillus pasteurii, ni	99.91
2p9b_A	458	Possible prolidase; protein structure initiative I	99.91
3gnh_A	403	L-lysine, L-arginine carboxypeptidase CC2672; N-me	99.91
1onw_A	390	Isoaspartyl dipeptidase; amidohydrolase, hydrolase	99.9
2paj_A	492	Putative cytosine/guanine deaminase; NYSGXRC, PSI-	99.9
4gy7_A	840	Urease; JACK bean, hydrolase, ME binding, nickel;	99.9
3h4u_A	479	Amidohydrolase; signature of Zn ligands, structura	99.9
2imr_A	420	Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2,	99.89
2qs8_A	418	XAA-Pro dipeptidase; amidohydrolase, TIM barrel, p	99.89
2qt3_A	403	N-isopropylammelide isopropyl amidohydrolase; N-is	99.88
3lnp_A	468	Amidohydrolase family protein OLEI01672_1_465; TIM	99.88
4f0r_A	447	5-methylthioadenosine/S-adenosylhomocysteine DEAM;	99.88
2i9u_A	439	Cytosine/guanine deaminase related protein; protei	99.88
4dyk_A	451	Amidohydrolase; adenosine deaminase, nysgrc, struc	99.88
4dzh_A	472	Amidohydrolase; adenosine deaminase, nysgrc, struc	99.87
2ogj_A	417	Dihydroorotase; TIM barrel, binuclear zinc, imidaz	99.87
3ls9_A	456	Triazine hydrolase; atrazine chlorohydrolase TRZN;	99.87
2ood_A	475	BLR3880 protein; PSI-II, PSI-2, guanine deaminase,	99.86
1p1m_A	406	Hypothetical protein TM0936; putative metal depend	99.85
2q09_A	416	Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dio	99.85
2vhl_A	396	N-acetylglucosamine-6-phosphate deacetylase; N- ac	99.84
4ep8_C	566	Urease subunit alpha; alpha-beta barrel, nickel me	99.83
3nqb_A	608	Adenine deaminase 2; PSI-II, structural genomics,	99.83
4aql_A	476	Guanine deaminase; hydrolase, purine metabolism; H	99.81
2puz_A	419	Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino	99.79
3v7p_A	427	Amidohydrolase family protein; iron binding site,	99.78
2bb0_A	421	Imidazolonepropionase; TIM barrel, hydrolase; 2.00	99.77
1yrr_A	382	N-acetylglucosamine-6-phosphate deacetylase; (beta	99.74
3ooq_A	396	Amidohydrolase; structural genomics, protein struc	99.74
4f0l_A	458	Amidohydrolase; ssgcid, structural genomics, seatt	99.73
3mdu_A	453	N-formimino-L-glutamate iminohydrolase; amonohydra	99.7
3hpa_A	479	Amidohydrolase; signature of Zn ligands, structura	99.69
3icj_A	534	Uncharacterized metal-dependent hydrolase; structu	99.69
3iv8_A	381	N-acetylglucosamine-6-phosphate deacetylase; IDP01	99.65
3ggm_A	81	Uncharacterized protein BT9727_2919; bacillus cere	99.64
3mtw_A	403	L-arginine carboxypeptidase CC2672; hydrolase; HET	99.61
3mkv_A	426	Putative amidohydrolase; sargasso SEA, structural	99.52
1o12_A	376	N-acetylglucosamine-6-phosphate deacetylase; struc	99.46
1bf6_A	291	Phosphotriesterase homology protein; hypothetical	98.88
2vc7_A	314	Aryldialkylphosphatase; phosphotriesterase, promis	98.46
1zzm_A	259	Putative deoxyribonuclease YJJV; hydrolaze, zinc,	98.28
2y1h_A	272	Putative deoxyribonuclease tatdn3; hydrolase; 2.50	98.21
2ob3_A	330	Parathion hydrolase; metalloenzyme, TIM barrel, ne	98.16
1yix_A	265	Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW	98.0
4i6k_A	294	Amidohydrolase family protein; enzyme function ini	97.99
1xwy_A	264	DNAse TATD, deoxyribonuclease TATD; TIM barrael, z	97.98
3rcm_A	287	TATD family hydrolase; HET: CIT; 2.05A {Pseudomona	97.94
2xio_A	301	Putative deoxyribonuclease tatdn1; hydrolase; 1.19	97.91
3ipw_A	325	Hydrolase TATD family protein; niaid, ssgcid, seat	97.89
2dvt_A	327	Thermophilic reversible gamma-resorcylate decarbo;	97.78
3guw_A	261	Uncharacterized protein AF_1765; alpha-beta protei	97.78
3gg7_A	254	Uncharacterized metalloprotein; structural genomic	97.67
3cjp_A	272	Predicted amidohydrolase, dihydroorotase family; s	97.53
2ffi_A	288	2-pyrone-4,6-dicarboxylic acid hydrolase, putativ;	97.52
1j6o_A	268	TATD-related deoxyribonuclease; structural genomic	97.47
4d9a_A	303	2-pyrone-4,6-dicarbaxylate hydrolase; structural g	97.35
2gzx_A	265	Putative TATD related DNAse; deoxyribonuclease, NE	97.27
3rhg_A	365	Putative phophotriesterase; hydrolase, amidohydrol	97.22
2f6k_A	307	Metal-dependent hydrolase; metal dependent hydroly	97.2
4do7_A	303	Amidohydrolase 2; enzyme function initiative, EFI,	97.09
3tn4_A	360	Phosphotriesterase; lactonase, hydrolase; HET: KCX	97.03
3pnz_A	330	Phosphotriesterase family protein; amidohydrolase	96.96
3gtx_A	339	Organophosphorus hydrolase; mutant, amidohydrolase	96.85
3ovg_A	363	Amidohydrolase; structural genomics, PSI-2, protei	96.8
2hbv_A	334	2-amino-3-carboxymuconate 6-semialdehyde decarbox;	96.74
3e2v_A	401	3'-5'-exonuclease; structural genomics, hydrolase,	96.52
3k2g_A	364	Resiniferatoxin-binding, phosphotriesterase- relat	96.36
2wm1_A	336	2-amino-3-carboxymuconate-6-semialdehyde decarboxy	96.31
3irs_A	291	Uncharacterized protein BB4693; structural genomic	95.97
2pgf_A	371	Adenosine deaminase; metallo-dependent hydrolase,	95.5
3nur_A	357	Amidohydrolase; TIM barrel; 1.75A {Staphylococcus	95.39
3ij6_A	312	Uncharacterized metal-dependent hydrolase; structu	94.88
3pao_A	326	Adenosine deaminase; structural genomics, PSI-2, p	94.55
3iar_A	367	Adenosine deaminase; purine metabolism structural	94.48
3rys_A	343	Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2	94.4
1eye_A	280	DHPS 1, dihydropteroate synthase I; alpha-beta bar	92.35
2wje_A	247	CPS4B, tyrosine-protein phosphatase CPSB; capsule	91.97
1aj0_A	282	DHPS, dihydropteroate synthase; antibiotic, resist	91.28
1tx2_A	297	DHPS, dihydropteroate synthase; folate biosynthesi	89.56
3aam_A	270	Endonuclease IV, endoiv; DNA repair, base excision	88.93
4inf_A	373	Metal-dependent hydrolase; amidohydrolase, metal b	86.65
4gxw_A	380	Adenosine deaminase; amidohydrolase, COG1816, EFI,	85.62
3qy7_A	262	Tyrosine-protein phosphatase YWQE; TIM barrel, pol	85.36
2y5s_A	294	DHPS, dihydropteroate synthase; transferase, folat	84.23
3p6l_A	262	Sugar phosphate isomerase/epimerase; TIM barrel, s	83.79
4dzi_A	423	Putative TIM-barrel metal-dependent hydrolase; ami	82.05

>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}

Probab=100.00  E-value=9.7e-58  Score=455.48  Aligned_cols=333  Identities=24%  Similarity=0.318  Sum_probs=290.2

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC--CCcCchHH
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGFPS  120 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~--~~~e~~~~  120 (399)
                      |+++|+|++|+++++..+++|+|+||||++|++..+      +.++||++|++|+|||||+|+|+.+++.  .++++++.
T Consensus         1 m~~~i~~~~v~~~~~~~~~~v~I~~G~I~~i~~~~~------~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~   74 (490)
T 3dc8_A            1 MSTVIKGGTIVTADLTYKADVKVEGGRIVEIGPNLS------GAETLDATGCYVMPGGIDPHTHLEMPFMGTYSSDDFES   74 (490)
T ss_dssp             -CEEEESCEEECSSCEEECEEEEETTEEEEEESSCC------CSEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHH
T ss_pred             CcEEEEccEEECCCCceeeeEEEECCEEEEeccCCC------CCeEEECCCCEEecCEEeeccccCCCCCCCCCHHHHHH
Confidence            468999999999988888999999999999997532      4579999999999999999999998866  67889999


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHH-HcCCcEEEEeecC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFMCP  199 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~~~ik~~~~~  199 (399)
                      .++.++++||||+++|+ ++.|.....+.++.+.+.+. ...+++.+++.+.....+.++++.++. +.|+.++|.|+.+
T Consensus        75 ~~~aa~~~GvTtv~~~~-~~~p~~~~~~~~~~~~~~a~-~~~~d~~~~~~~~~~~~~~l~el~~l~~~~G~~~~k~~~~~  152 (490)
T 3dc8_A           75 GTRAALAGGTTMVVDFA-LPSPGQSLLEALTMWDNKST-RANCDYSFHMAITWWGEQVFNEMETIVKDKGINTFKHFMAY  152 (490)
T ss_dssp             HHHHHHHTTEEEEEEEE-CCC-CCCHHHHHHHHHHHTT-TCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESCS
T ss_pred             HHHHHHHcCEEeecccC-CCCCCcCHHHHHHHHHHHhh-cccceeeeEEEEecCcHHHHHHHHHHHHhCCCCEEEEEecC
Confidence            99999999999999999 66676666777777776665 677899988877666656678899998 8999999999877


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch---hHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHH
Q 015826          200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA  276 (399)
Q Consensus       200 ~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a  276 (399)
                      .   ..+.+++++|.+++++|+++|+++++|+|+.+.+.   ..+++.+    ......++.++|+.+|..++.+.+.++
T Consensus       153 ~---~~~~~~~~~l~~~~~~a~~~g~~v~~HaE~~~~i~~~~~~~~~~g----~~~~~~~~~~rP~~~E~~av~r~i~la  225 (490)
T 3dc8_A          153 K---GALMVDDDEMFSSFQRCAALGALPLVHAENGDVVAQLQAKLLAEG----NSGPEAHAYSRPAEVEGEAANRAIMIA  225 (490)
T ss_dssp             T---TTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTT----CCSHHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             C---CCccCCHHHHHHHHHHHHhcCCEEEEecCChHHHHHHHHHHHhcC----CCCccccccCCCHHHHHHHHHHHHHHH
Confidence            4   23457999999999999999999999999987653   3334333    334455677999999999999999999


Q ss_pred             hhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCC----CcceEEcCCCCChhhHHH
Q 015826          277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRFKCAPPIRDAANKEK  352 (399)
Q Consensus       277 ~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~----~~~~~~~Pplr~~~~~~~  352 (399)
                      +++       |+++||+|+|+. +++++|+.+|++|++|++|+|||||+++++++...    ++.++|+||||++++|++
T Consensus       226 ~~~-------g~~lhi~HvSt~-~~~~li~~ak~~G~~Vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~~Pplr~~~d~~a  297 (490)
T 3dc8_A          226 DMA-------GCPVYIVHTSCE-QAHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDS  297 (490)
T ss_dssp             HHH-------TCCEEESSCCSH-HHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSCHHHHHHTCCSSCCCCGGGHHH
T ss_pred             HHh-------CCcEEEEeCCCH-HHHHHHHHHHHCCCeEEEEEchHHheeCHHHhcCcCcccCCceEECCCCCChHHHHH
Confidence            987       899999999999 99999999999999999999999999999988766    688999999999999999


Q ss_pred             HHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          353 LWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       353 l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      ||+++++|.+|+|+|||+||+.++|..+.++|+++|+|++|+|+.|
T Consensus       298 L~~~l~~G~id~i~sDh~p~~~~~K~~g~~~f~~~~~G~~gle~~l  343 (490)
T 3dc8_A          298 LWAGLASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGGLEDRM  343 (490)
T ss_dssp             HHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHH
T ss_pred             HHHHHhcCCceEEECCCCCCCHHHhhccCCChhhCCCChHHHHHHH
Confidence            9999999999999999999999999877779999999999999865

>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*

Probab=100.00  E-value=2e-54  Score=429.82  Aligned_cols=339  Identities=26%  Similarity=0.363  Sum_probs=287.7

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC--CCCCcCchHH
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPS  120 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~--~~~~~e~~~~  120 (399)
                      |+++|+|++|+++++..+++|+|+||||++|++....    ++.++||++|++|+|||||+|+|+..+  +....+++..
T Consensus         1 M~~~i~n~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~viD~~g~~v~PG~ID~H~H~~~~~~~~~~~e~~~~   76 (461)
T 3sfw_A            1 MKKWIRNGTVVTASDTYQADVLIDGEKVVAIGSDLQA----TDAEVIDATGYYLLPGGIDPHTHLDMPFGGTVTSDNFFT   76 (461)
T ss_dssp             CEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC----SSCEEEECTTCEEEECEEEEEECTTCEETTEECSCCHHH
T ss_pred             CcEEEECeEEECCCCcEEEEEEEECCEEEEEeCCCCC----CCCeEEECCCCEEEeeeEEeEeccCcCCCCcccHhHHHH
Confidence            3689999999998887889999999999999976432    367899999999999999999999876  5566788999


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHH-cCCcEEEEeecC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSFMCP  199 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~~~ik~~~~~  199 (399)
                      .++.++++||||+++++ ++.+.....+.++...+.......+++++++.+.....+.+++++++++ .|+.++|.++.+
T Consensus        77 ~~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~~~ik~~~~~  155 (461)
T 3sfw_A           77 GTKAAAFGGTTSIVDFC-LTSKGESLHSAIATWHEKARGKAVIDYGFHLMVSDANDHVLEELESVVNNEGITSLKVFMAY  155 (461)
T ss_dssp             HHHHHHHTTEEEEEEEE-CCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSCCCHHHHHHHHHHHHTSCCCEEEEESSS
T ss_pred             HHHHHHhCCEEEEEccC-CCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEEEEec
Confidence            99999999999999998 5666666677777777777667788998887766555667889999999 999999999877


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhh
Q 015826          200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDT  279 (399)
Q Consensus       200 ~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~  279 (399)
                      ++   .+.++++++.+++++|+++|+++.+|+++...+........ ..+..+...++..+|..+|..++.+++.+++++
T Consensus       156 ~~---~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~~~~~~~~~~~~-~~G~~~~~~~~~~~p~~~e~~av~~~~~la~~~  231 (461)
T 3sfw_A          156 KN---VLMADDETLFKTLIRAKELGALVQVHAENGDVLDYLTKQAL-AEGNTDPIYHAYTRPPEAEGEATGRAIALTALA  231 (461)
T ss_dssp             TT---TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred             CC---CcccCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHH-hcCCCChhHhcccCCHHHHHHHHHHHHHHHHHh
Confidence            43   34679999999999999999999999999876543221110 112334445667899999999999999999976


Q ss_pred             ccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC---CCcceEEcCCCCChhhHHHHHHH
Q 015826          280 RTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEA  356 (399)
Q Consensus       280 ~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~---~~~~~~~~Pplr~~~~~~~l~~~  356 (399)
                             ++++|++|+|+. +++++|+.+|++|++|++++|||||+++++++..   .++.++++||||+++++++||++
T Consensus       232 -------g~~~hi~H~s~~-~~l~~i~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~~~~Pplr~~~~~~aL~~~  303 (461)
T 3sfw_A          232 -------DAQLYVVHVSCA-DAVRRIAEAREKGWNVYGETCPQYLVLDITALEKPDFEGAKYVWSPPLREKWNQDVLWSA  303 (461)
T ss_dssp             -------TCEEEECSCCSH-HHHHHHHHHHHTTCEEEEEECHHHHHCCGGGGGCTTTGGGGGCCSSCCCCTHHHHHHHHH
T ss_pred             -------CCCEEEEecCcH-HHHHHHHHHHhcCCcEEEeeccceEEEcHHHhcCccccCCcEEEcCCCCChHHHHHHHHH
Confidence                   999999999999 9999999999999999999999999999988764   47889999999999999999999


Q ss_pred             HhcCCccEEeCCCCCCCc-ccccCCcCCcccccCCcchhcccc
Q 015826          357 LMDGHIDMLSSDHSPTVP-ELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       357 l~~G~id~i~sdh~p~~~-~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +++|.+++|+|||+||+. +.|..+.++|+.+++|++|+|+.+
T Consensus       304 l~~G~~~~i~sD~~p~~~~~~k~~~~~~~~~~~~G~~g~e~~~  346 (461)
T 3sfw_A          304 LKNGILQTVGSDHCPFNFSGQKELGRRDFTKIPNGGPIIEDRM  346 (461)
T ss_dssp             HHTTSSCEECCCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHH
T ss_pred             HhcCCceEEECCCCCCCchhhhhcccCCHhhCCCCCccHHHHH
Confidence            999999999999999984 445444568999999999999864

>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}

Probab=100.00  E-value=1.5e-54  Score=431.26  Aligned_cols=335  Identities=37%  Similarity=0.655  Sum_probs=277.8

Q ss_pred             CCccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHH
Q 015826           41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS  120 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~  120 (399)
                      ++++++|+|++|+++++..+++|+|+||||++|++....     ..++||++|++|+|||||+|+|+.+++...++++..
T Consensus        21 m~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~-----~~~~id~~g~~v~PG~iD~H~H~~~~g~~~~~~~~~   95 (473)
T 3e74_A           21 MSFDLIIKNGTVILENEARVVDIAVKGGKIAAIGQDLGD-----AKEVMDASGLVVSPGMVDAHTHISEPGRSHWEGYET   95 (473)
T ss_dssp             -CEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCC-----EEEEEECTTCEEEECEEEEEECC---------CHHH
T ss_pred             CcCCEEEEeeEEECCCCceeeeEEEECCEEEEEcCCCCC-----CCcEEECCCCEEecCEEEEecccCCCCCCcHHHHHH
Confidence            446899999999999887789999999999999975432     257999999999999999999999988888899999


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPS  200 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~  200 (399)
                      .++.++++||||+++|++++.|.....+.+....+.+.....+++.++++....+   .++++++.+.|+.++|+++.+.
T Consensus        96 ~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~---~~~l~~l~~~G~~~~K~~~~~~  172 (473)
T 3e74_A           96 GTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGGLVSYN---IDRLHELDEVGVVGFKCFVATC  172 (473)
T ss_dssp             HHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEECEECCTTC---TTTHHHHHHHTCSCEEEEC---
T ss_pred             HHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEEeecccch---HHHHHHHHHcCCCEEEEecccc
Confidence            9999999999999999966777777888888888887777788999887765543   4567788889999999998753


Q ss_pred             CC----CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch---hHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHH
Q 015826          201 GI----NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELL  273 (399)
Q Consensus       201 ~~----~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~  273 (399)
                      +.    +..+.++++.+++++++|+++|+++.+|+++.....   ...+..    +......++.++|+.+|..++.+++
T Consensus       173 ~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~~~~~----g~~~~~~~~~~~p~~~e~~av~~~l  248 (473)
T 3e74_A          173 GDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENALICDELGEEAKRE----GRVTAHDYVASRPVFTEVEAIRRVL  248 (473)
T ss_dssp             ---------CCCCHHHHHHHHHHHHHHTCCEEEECSCHHHHHHHHHHHHHH----TCCSHHHHHHTSCHHHHHHHHHHHH
T ss_pred             CCcccccccCCCCHHHHHHHHHHHHhcCCeEEEEecCHHHHHHHhhHHHhc----CCcChhhcccCCCHHHHHHHHHHHH
Confidence            21    234567899999999999999999999999875543   223322    2334455667999999999999999


Q ss_pred             HHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHH
Q 015826          274 TVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKL  353 (399)
Q Consensus       274 ~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l  353 (399)
                      .+++++       ++++|++|+|+. +++++++.+|++|+++++++|||||+++++++...+..++++||||++++|++|
T Consensus       249 ~la~~~-------g~~lhi~Hvst~-~~l~li~~ak~~G~~vt~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L  320 (473)
T 3e74_A          249 YLAKVA-------GCRLHVCHVSSP-EGVEEVTRARQEGQDITCESCPHYFVLDTDQFEEIGTLAKCSPPIRDLENQKGM  320 (473)
T ss_dssp             HHHHHH-------TCCEEECSCCSH-HHHHHHHHHHHTTCCEEEEECTHHHHCCHHHHHHHCGGGCCSSCCCCHHHHHHH
T ss_pred             HHHHHh-------CCcEEEEeCCCH-HHHHHHHHHHHcCCCeEEEEchHhhhcCHHHHhCCCCcEEEeCCCCCHHHHHHH
Confidence            999987       899999999999 999999999999999999999999999998877668899999999999999999


Q ss_pred             HHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          354 WEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       354 ~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      |+++++|.+++|+|||+||+.++|.   .+|+.+|+|++|+|+.+
T Consensus       321 ~~~l~~G~~~~i~tDh~p~~~~~k~---~~f~~~~~G~~g~e~~l  362 (473)
T 3e74_A          321 WEKLFNGEIDCLVSDHSPCPPEMKA---GNIMKAWGGIAGLQSCM  362 (473)
T ss_dssp             HHHHHTTCCCEECCCBCCCCTTTTC---SCTTTSCCCBCCGGGHH
T ss_pred             HHHHhCCCCcEEEeCCCCCCHHHcc---cChhhcCCCcccHHhHH
Confidence            9999999999999999999998885   47999999999999854

>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=3.1e-52  Score=409.74  Aligned_cols=328  Identities=26%  Similarity=0.390  Sum_probs=277.4

Q ss_pred             EEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHHH
Q 015826           45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKA  124 (399)
Q Consensus        45 ~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~  124 (399)
                      ++|+|++|++.....+++|+|+||||++|++..+..   ++.++||++|++|+|||||+|+|+..++....+++...++.
T Consensus         2 ~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~---~~~~~id~~g~~v~PG~iD~H~H~~~~g~~~~~~~~~~~~~   78 (424)
T 3gri_A            2 KLIKNGKVLQNGELQQADILIDGKVIKQIAPAIEPS---NGVDIIDAKGHFVSPGFVDVHVHLREPGGEYKETIETGTKA   78 (424)
T ss_dssp             EEEESCEEEETTEEEECEEEEETTEEEEEESCCCCC---SSCEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHHHHH
T ss_pred             EEEEeeEEEcCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEEeCeEEeeecCCCCCCCCHHHHHHHHHH
Confidence            789999999943346899999999999999865422   36789999999999999999999998888888999999999


Q ss_pred             HHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC-ChhhHHHHHHHHHcCCcEEEEeecCCCCC
Q 015826          125 AAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPSGIN  203 (399)
Q Consensus       125 al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik~~~~~~~~~  203 (399)
                      ++++||||+++++ ++.|.....+.++...+.+...+.+++..++.+... ..+.+++++++.+.|+.++..       .
T Consensus        79 ~~~~G~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l~~~G~~~~~~-------~  150 (424)
T 3gri_A           79 AARGGFTTVCPMP-NTRPVPDSVEHFEALQKLIDDNAQVRVLPYASITTRQLGKELVDFPALVKEGAFAFTD-------D  150 (424)
T ss_dssp             HHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEECCCEESBGGGCSSSBCCHHHHHTTTCCCEEE-------C
T ss_pred             HHhCCEEEEeECc-CCCCCCChHHHHHHHHHHhccCCCceEEEEEEEecCCCcchHHHHHHHHhcCcEEEec-------C
Confidence            9999999999999 666767777888887777765555677666655432 223345677888889887753       1


Q ss_pred             CCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCC
Q 015826          204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDG  283 (399)
Q Consensus       204 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~  283 (399)
                      ..+..+++.++++++.|+++|+++++|+++........+.    .+......++.++|..+|..++.+.+.+++++    
T Consensus       151 ~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~----~g~~~~~~~~~~~p~~~E~~~v~r~~~la~~~----  222 (424)
T 3gri_A          151 GVGVQTASMMYEGMIEAAKVNKAIVAHCEDNSLIYGGAMH----EGKRSKELGIPGIPNICESVQIARDVLLAEAA----  222 (424)
T ss_dssp             SSCCCSHHHHHHHHHHHHHHTCCEEECCCCGGGCTTCCEE----SSHHHHHHTCCEECTHHHHHHHHHHHHHHHHH----
T ss_pred             CcCcCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHhhhhhh----cCccchhhCCCCCCHHHHHHHHHHHHHHHHHh----
Confidence            2345789999999999999999999999998765433322    23344556778899999999999999999986    


Q ss_pred             CCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCcc
Q 015826          284 PAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID  363 (399)
Q Consensus       284 ~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id  363 (399)
                         |+++|++|+|+. +++++|+++|++|+++++++|||||+++.+++...++.++++||||+++++++||+++++|.+|
T Consensus       223 ---g~~~~i~H~s~~-~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~L~~~l~~G~i~  298 (424)
T 3gri_A          223 ---GCHYHVCHVSTK-ESVRVIRDAKRAGIHVTAEVTPHHLLLTEDDIPGNNAIYKMNPPLRSTEDREALLEGLLDGTID  298 (424)
T ss_dssp             ---TCCEEECSCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHTTSSC
T ss_pred             ---CCcEEEEeCCCH-HHHHHHHHHHHcCCCEEEEecHHHHhcCHHHHhCcCceEEEeCCCCCHHHHHHHHHHHhcCCce
Confidence               899999999999 9999999999999999999999999999999888889999999999999999999999999999


Q ss_pred             EEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          364 MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       364 ~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +|+|||+||+.++|.   .+|+.+|+|++|+|+.+
T Consensus       299 ~igtDhap~~~~~k~---~~~~~~~~G~~g~e~~~  330 (424)
T 3gri_A          299 CIATDHAPHARDEKA---QPMEKAPFGIVGSETAF  330 (424)
T ss_dssp             EECCCBCCCCHHHHT---SCTTTSCCCCCCTTTHH
T ss_pred             EEEcCCCCCCHHHcc---CCHhHCCCCCccccccH
Confidence            999999999999886   47999999999999854

>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}

Probab=100.00  E-value=3.7e-52  Score=412.20  Aligned_cols=336  Identities=38%  Similarity=0.668  Sum_probs=287.4

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEecc--CCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchH
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVS--EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFP  119 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~--~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~  119 (399)
                      +++++|+|++|+++++..+++|+|+||||++|++  ..+.    ++.++||++|++|+|||||+|+|+..++....+++.
T Consensus         5 ~~~~~i~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~----~~~~~id~~g~~v~PG~ID~H~H~~~~~~~~~~~~~   80 (448)
T 3hm7_A            5 RFDLIIRSSTVVTETTTYRADVAIRNGIVSAITEPGSISS----DDGPAIDGTGLHLFPGMVDVHVHFNEPGRTEWEGFA   80 (448)
T ss_dssp             CCSEEEEEEEEECSSCEEEEEEEEETTEEEEEESTTCSCT----TSSCEEECTTCEEEECEEEEEECCCTTTSGGGCCSH
T ss_pred             cccEEEEeeEEECCCCceEeEEEEECCEEEEeeCccCCCC----CCCeEEECCCCEEecCEEEeeeccCCCCCCcHhHHH
Confidence            4689999999999988778999999999999997  3321    356899999999999999999999988877778888


Q ss_pred             HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecC
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCP  199 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~  199 (399)
                      ..++.++++||||++++++++.|.....+.+....+.+.....+++.++++..+..   .++++++.+.|+.++|.++.+
T Consensus        81 ~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~l~~~g~~~~~~~l~~  157 (448)
T 3hm7_A           81 SGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGGLVPGN---IDHLQDLHDGGVIGFKAFMSE  157 (448)
T ss_dssp             HHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEECCTTC---GGGHHHHHHTTCSEEEEESSS
T ss_pred             HHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEEecccC---HHHHHHHHHcCCCEEEEeecc
Confidence            99999999999999999866667667788888777776655677888887765443   456777788999999998877


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch---hHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHH
Q 015826          200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA  276 (399)
Q Consensus       200 ~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a  276 (399)
                      ...+..+..+++.+.++++.|+++|+++.+|+++.....   +..++.    +......++.++|+.+|..++.+++.++
T Consensus       158 ~~~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~p~~~e~~av~~~~~la  233 (448)
T 3hm7_A          158 CGTDDFQFSHDETLLKGMKKIAALGSILAVHAESNEMVNALTTIAIEE----QRLTVKDYSEARPIVSELEAVERILRFA  233 (448)
T ss_dssp             CSSSSSCCCCHHHHHHHHHHHHHHTCCEEEECCCHHHHHHHHHHHHHT----TCCSHHHHHHHSCHHHHHHHHHHHHHHH
T ss_pred             ccCCccCcCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhc----CCcChhhccccCCHHHHHHHHHHHHHHH
Confidence            543333456899999999999999999999999987644   234433    3345556677899999999999999999


Q ss_pred             hhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHH
Q 015826          277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEA  356 (399)
Q Consensus       277 ~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~  356 (399)
                      +++       |+++|++|+|+. +++++++++|++|+++++++|||||+++.+.+...++.++++||||+++++++||++
T Consensus       234 ~~~-------g~~~~i~H~s~~-~~~~~i~~ak~~G~~v~~e~~ph~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~  305 (448)
T 3hm7_A          234 QLT-------CCPIHICHVSSR-KVLKRIKQAKGEGVNVSVETCPHYLLFSLDEFAEIGYLAKCAPPLRERQEVEDLWDG  305 (448)
T ss_dssp             HHH-------TCCEEECCCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCHHHHHHHCSTTCCSSCCCCHHHHHHHHHH
T ss_pred             HHh-------CCCEEEEeCCCH-HHHHHHHHHHhcCCCEEEEechHHHccCHHHhcCCCCeEEEcCCCCCHHHHHHHHHH
Confidence            986       899999999998 999999999999999999999999999998876668899999999999999999999


Q ss_pred             HhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          357 LMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       357 l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +++|.+++++|||+|++.++|..+  +|+.+|+|++|+|+.+
T Consensus       306 l~~g~~~~i~tD~~p~~~~~k~~~--~~~~~~~G~~g~e~~l  345 (448)
T 3hm7_A          306 LMAGEIDLISSDHSPSLPQMKTGK--TIFEVWGGIAGCQNTL  345 (448)
T ss_dssp             HHHTCCCEECCCBCCCCGGGGCCS--STTTSCCCBCCTTTHH
T ss_pred             HhcCCccEEEeCCCCCCHHHcccC--CHhhCCCCCccHHHHH
Confidence            999999999999999999888643  6999999999999864

>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}

Probab=100.00  E-value=2.3e-50  Score=396.99  Aligned_cols=329  Identities=27%  Similarity=0.451  Sum_probs=275.4

Q ss_pred             ccEEEEccEEEcCCC-ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHH
Q 015826           43 NQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSG  121 (399)
Q Consensus        43 ~~~li~n~~vv~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~  121 (399)
                      |+++|+|++|++..+ ..+++|+|+||||++|++..+.    ++.++||++|++|+|||||+|+|+..++....+++...
T Consensus         1 m~~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~   76 (428)
T 3mpg_A            1 MNYLFKNGRYMNEEGKIVATDLLVQDGKIAKVAENITA----DNAEVIDVNGKLIAPGLVDVHVHLREPGGEHKETIETG   76 (428)
T ss_dssp             CEEEEEEEEEECSSSCEEEEEEEEESSBEEECCSSCCC----TTSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHH
T ss_pred             CcEEEEeeEEEeCCCCeeeeeEEEECCEEEEecCCCCC----CCCeEEECCCCEEeeCEEEEeeccCCCCCCchhHHHHH
Confidence            478999999997544 4689999999999999976432    36789999999999999999999998887888899999


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC-ChhhHHHHHHHHHcCCcEEEEeecCC
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPS  200 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik~~~~~~  200 (399)
                      ++.++++||||+++++ ++.|.....+.++...+.+...+..++..++.+... ..+...++.++.+.|+.++..     
T Consensus        77 ~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~G~~~~~~-----  150 (428)
T 3mpg_A           77 TLAAAKGGFTTICAMP-NTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAITVRQAGSEMTDFETLKELGAFAFTD-----  150 (428)
T ss_dssp             HHHHHHHTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEECEESBGGGCSSSBCCHHHHHHTTCCCEEC-----
T ss_pred             HHHHHhCCeEEEEeCC-CCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeEecCCCcchHHHHHHHHHhCCEEEEC-----
Confidence            9999999999999998 666666677777777776665555666665554332 122345677888889877742     


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhc
Q 015826          201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTR  280 (399)
Q Consensus       201 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~  280 (399)
                        ...+..+++.++++++.|+++|+++++|+++........+.    .+......++.++|..+|..++.+.+.+++++ 
T Consensus       151 --~~~~~~~~~~l~~~~~~a~~~g~~v~vH~~~~~~~~~~~~~----~g~~~~~~~~~~~p~~~e~~~v~~~~~la~~~-  223 (428)
T 3mpg_A          151 --DGVGVQDASMMLAAMKRAAKLNMAVVAHCEENTLINKGCVH----EGKFSEKHGLNGIPSVCESVHIARDILLAEAA-  223 (428)
T ss_dssp             --TTSCCCCHHHHHHHHHHHHHTTCCEEECCCCGGGCTTCSEE----TTHHHHHTTCCEECTHHHHHHHHHHHHHHHHH-
T ss_pred             --CCcCCCCHHHHHHHHHHHHhcCCeEEEECCChhHhhhHHhh----cCccchhhCcCCCCHHHHHHHHHHHHHHHHHh-
Confidence              12345789999999999999999999999988765433322    22344456778899999999999999999976 


Q ss_pred             cCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcC
Q 015826          281 TDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDG  360 (399)
Q Consensus       281 ~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G  360 (399)
                            ++++|++|+|+. +++++++++|++|+++++++|||||+++++.+...++.++++||+|+++++++||+++++|
T Consensus       224 ------g~~~~i~H~s~~-~~~~~i~~a~~~G~~v~~e~~p~~l~l~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G  296 (428)
T 3mpg_A          224 ------DCHYHVCHVSTK-GSVRVIRDAKRAGIKVTAEVTPHHLVLCEDDIPSADPNFKMNPPLRGKEDHEALIEGLLDG  296 (428)
T ss_dssp             ------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEECBCHHHHHCCGGGCCSSCGGGCCSSCCCCHHHHHHHHHHHHHT
T ss_pred             ------CCCEEEEeCCCH-HHHHHHHHHHhcCCCEEEEEchHHhEECHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHhCC
Confidence                  899999999998 9999999999999999999999999999998887889999999999999999999999999


Q ss_pred             CccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          361 HIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       361 ~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      .+++++|||+||+.++|..   +|+.+|+|++|+|+.+
T Consensus       297 ~i~~i~tDh~p~~~~~k~~---~~~~~p~g~~g~e~~~  331 (428)
T 3mpg_A          297 TIDMIATDHAPHTAEEKAQ---GIERAPFGITGFETAF  331 (428)
T ss_dssp             SSCCBCCCBCCCCTTGGGS---CTTTSCSCCCCTTTHH
T ss_pred             CCcEEEcCCCCCCHHHccc---CHhhCCCCceehhhHH
Confidence            9999999999999988864   6999999999999854

>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*

Probab=100.00  E-value=2.9e-50  Score=407.52  Aligned_cols=338  Identities=23%  Similarity=0.348  Sum_probs=267.3

Q ss_pred             CCccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC---CCCcCc
Q 015826           41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG---RTEWEG  117 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~---~~~~e~  117 (399)
                      |+++++|+|++|+++++..+++|+|+||||++|++.....   .+.++||++|++|+|||||+|+|+.++.   ..+.++
T Consensus         1 ~~m~~li~n~~vv~~~~~~~~~v~I~~g~I~~Ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~e~   77 (559)
T 2fty_A            1 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPS---LGSEVIDAEGAFITPGGIDAHVHVDEPLKLLGDVVDT   77 (559)
T ss_dssp             CCEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCGG---GEEEEEECTTCEEEECEEECCBCCCCTTCTTSCCSCC
T ss_pred             CCceEEEECcEEEcCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEeCCCCEEEcCEEeeccCcCccccccCCCHHH
Confidence            4678999999999998777899999999999998754211   2457999999999999999999998863   446788


Q ss_pred             hHHHHHHHHcCCeeeeecCcCCCC---CCCC-cHHHHHHHHHHHhc-cCceeEEeeeeeeCC---Chh---hH-HHHHHH
Q 015826          118 FPSGTKAAAAGGITTLIDMPLNSD---PSTI-STETLKLKVDAAEK-RIYVDVGFWGGLVPE---NAY---NA-SALEAL  185 (399)
Q Consensus       118 ~~~~~~~al~~GvTtv~d~~~~~~---~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~---~~-~~l~~l  185 (399)
                      ++..++.++++||||+++|+ +..   +... ..+.+....+.... ...+++++++.....   ..+   .+ ++++++
T Consensus        78 ~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~l~~~~~~l  156 (559)
T 2fty_A           78 MEHATRSAVAGGTTTVVAFS-TQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAA  156 (559)
T ss_dssp             HHHHHHHHHHTTEEEEEEEE-ECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEECCCCCSSHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCcEEEEEECc-CcccCCcchHHHHHHHHHHHHHHHhhcceeEEEeeeeeccCcCCCchhhhhHHHHHHHH
Confidence            88899999999999999998 443   2222 22333110122222 356777776554433   223   45 677787


Q ss_pred             H-HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhH---HhhccCcCCchhhhcCCCCCC
Q 015826          186 L-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH---VKLEDDTLDTRSYSTYLKTRP  261 (399)
Q Consensus       186 ~-~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p  261 (399)
                      + +.|+.++|+++.+++    ..+++++|++++++|+++|+++++|+++...+...   +.+.|    ......++.++|
T Consensus       157 ~~~~G~~~iki~~~~~~----~~~s~e~l~~~~~~A~~~g~~v~~H~e~~~~i~~~~~~~~~~G----~~~~~~~~~~~p  228 (559)
T 2fty_A          157 YNDYGVSSVKMFMTYPG----LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQG----LTDAYYHGVSRP  228 (559)
T ss_dssp             HHHHCCCEEEEESSSTT----TBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTT----CCSTTHHHHTSC
T ss_pred             HHHCCCCEEEEEecCCC----CcCCHHHHHHHHHHHHhCCCEEEEECCChHHHHHHHHHHHhcC----CCChhhcccCCC
Confidence            7 679999999987642    36799999999999999999999999987765432   23322    233344556899


Q ss_pred             hHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccC----------
Q 015826          262 PSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI----------  331 (399)
Q Consensus       262 ~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~----------  331 (399)
                      +.+|..++.+++.+++++       ++++|++|+++. +++++|+++|++|++|++++|||||.++.+.+          
T Consensus       229 ~~~E~~av~~~i~la~~~-------g~~vhi~H~s~~-~~~~~i~~ak~~G~~Vt~e~~p~~l~l~~~~~~~~~~~~~~~  300 (559)
T 2fty_A          229 SIVEGEATNRAITLATTM-------DTPILFVHVSSP-QAAEVIKQAQTKGLKVYAETCPQYALLSDAITRCHHHGEVES  300 (559)
T ss_dssp             HHHHHHHHHHHHHHHHHT-------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGSCC-------
T ss_pred             HHHHHHHHHHHHHHHHHh-------CCCEEEEcCCCH-HHHHHHHHHHHcCCceEEeecCcccccCHHHhhccccccccc
Confidence            999999999999999975       899999999998 89999999999999999999999999987766          


Q ss_pred             -------------------CC-CCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccc-------------c
Q 015826          332 -------------------PD-GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK-------------L  378 (399)
Q Consensus       332 -------------------~~-~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k-------------~  378 (399)
                                         +. .++.++++||||+++++++||+++++|++++|+|||+|++.++|             .
T Consensus       301 ~g~~~d~~~~~~~~~~~~~~~~~~~~~~~~PplR~~~~~~~l~~~l~~G~~~~igTD~~p~~~~~k~~~~~k~~~~~~~~  380 (559)
T 2fty_A          301 YGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPEN  380 (559)
T ss_dssp             -CCSCCGGGCSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHTTSCSEECCCBCCCBSSCCSSTTBGGGGEEGGG
T ss_pred             cccccCccccccccccccCccccccCcEECCCCCCHHHHHHHHHHHhcCceEEEEeCCCCCChhhccccccccccccccc
Confidence                               11 35778999999999999999999999999999999999987754             2


Q ss_pred             CCcCCcccccCCcchhcccc
Q 015826          379 LDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       379 ~~~~~~~~~~~G~~g~e~~l  398 (399)
                      .+..+|+.+|+|++|+|+.+
T Consensus       381 ~~~~~f~~~~~G~~g~e~~l  400 (559)
T 2fty_A          381 NKNGEFRYIPNGLPGVCTRM  400 (559)
T ss_dssp             TEESCGGGSCCCBCCTTTHH
T ss_pred             cccCCHhhCCCCCccHHHHH
Confidence            22358999999999999754

>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}

Probab=100.00  E-value=9e-48  Score=365.96  Aligned_cols=256  Identities=19%  Similarity=0.201  Sum_probs=207.2

Q ss_pred             CCCCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCc-eeEEeee
Q 015826           91 YGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY-VDVGFWG  169 (399)
Q Consensus        91 ~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  169 (399)
                      -.|++|+||+||+|+|+++ |.     ......+|+++||||+++|| |+.|..++.+.++.+.+.+..... ++|.+++
T Consensus        21 ~~~~~vlPG~ID~HvHlre-G~-----~~~e~~aA~aGG~Ttvi~mP-nt~P~~~~~~~~~~~~~~a~~~~~~vd~~~~~   93 (359)
T 3pnu_A           21 QSNAMKLKNPLDMHLHLRD-NQ-----MLELIAPLSARDFCAAVIMP-NLIPPLCNLEDLKAYKMRILKACKDENFTPLM   93 (359)
T ss_dssp             SSCCEEEESCEEEEECCCS-HH-----HHHHHHHHHHTTCSEEEECC-CCSSCCCSHHHHHHHHHHHHHHHTTSCCEEEE
T ss_pred             CCCcEEccCcEEccccCCC-CC-----cchhHHHHHhCCCcEEEECC-CCCCCCCcHHHHHHHHHHHhccCCCceEEEee
Confidence            4589999999999999997 53     23445688999999999999 888988999999988888776666 8999998


Q ss_pred             e--eeCCChhhHHHHHHHHHcCCcEEEEeecCCCC---CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhc
Q 015826          170 G--LVPENAYNASALEALLNAGVLGLKSFMCPSGI---NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE  244 (399)
Q Consensus       170 ~--~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~---~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~  244 (399)
                      +  +++.   ..+++.++.+. +.++|+|+.+...   .+.+..+++.+++++++++++|+++.+|+|+.+.+..     
T Consensus        94 ~l~lt~~---~~~el~~l~~~-v~~~Kl~~aga~~~s~~~~~~~~~~~l~~~l~~~~~~g~~v~vHaEd~~~i~~-----  164 (359)
T 3pnu_A           94 TLFFKNY---DEKFLYSAKDE-IFGIKLYPAGITTNSNGGVSSFDIEYLKPTLEAMSDLNIPLLVHGETNDFVMD-----  164 (359)
T ss_dssp             EEECSCC---CHHHHHHHTTT-CSEEEECBTTSSSSCTTSBCCCCHHHHHHHHHHHHHTTCCEEECCCCSSCGGG-----
T ss_pred             eeEecCC---CHHHHHHHHHh-hhehhheeCCCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEecCCchHhHH-----
Confidence            8  6632   34678887777 8899999864211   1223448999999999999999999999999774210     


Q ss_pred             cCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEcccccc
Q 015826          245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYL  324 (399)
Q Consensus       245 ~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L  324 (399)
                                         +|..++.+++.++++.      +|+|+||+|+|++ +++++|+++    .+||||+|||||
T Consensus       165 -------------------~E~~ai~r~~~la~~~------~g~~lhi~HvSt~-~~v~~I~~A----~~VtaEv~phhL  214 (359)
T 3pnu_A          165 -------------------RESNFAKIYEKLAKHF------PRLKIVMEHITTK-TLCELLKDY----ENLYATITLHHL  214 (359)
T ss_dssp             -------------------TTGGGHHHHHHHHHHC------TTSCEEECSCCSH-HHHHHHHHC----TTEEEEECSGGG
T ss_pred             -------------------HHHHHHHHHHHHHHHc------CCCcEEEEecCcH-HHHHHHHhc----CCceEEEechhh
Confidence                               2455788888999752      5999999999999 999999998    789999999999


Q ss_pred             ccccccCC--CCCcceEEcCCCCChhhHHHHHHHHhcCCcc-EEeCCCCCCCcccccCCcCCcccccCCcchhccc
Q 015826          325 AFSAEEIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG  397 (399)
Q Consensus       325 ~~~~~~~~--~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id-~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~  397 (399)
                      +|+++++.  .+++.+||+||||+++||++||++|++|+|| +|+|||+||+.++|..   +|  .++|+.++|+.
T Consensus       215 ~lt~~~~~~~~~~~~~k~~PPLR~~~dr~aL~~al~dG~id~~iaTDHaPh~~~eK~~---~~--g~~Gi~~~~~~  285 (359)
T 3pnu_A          215 IITLDDVIGGKMNPHLFCKPIAKRYEDKEALCELAFSGYEKVMFGSDSAPHPKDTKEC---CG--CAAGVFSAPVI  285 (359)
T ss_dssp             TCCHHHHHTSSCCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCBC---------C--CCSCBCCGGGH
T ss_pred             EEcHHHhcCcCCCCceEEcCCCCCHHHHHHHHHHHhcCCCCEEEecCCCCCCHHHhCC---CC--CCCChhhHHHH
Confidence            99998874  3588999999999999999999999999999 7999999999999964   23  46777777754

>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*

Probab=100.00  E-value=2.2e-45  Score=364.36  Aligned_cols=339  Identities=24%  Similarity=0.309  Sum_probs=269.7

Q ss_pred             cEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC--CCCCcCchHHH
Q 015826           44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP--GRTEWEGFPSG  121 (399)
Q Consensus        44 ~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~--~~~~~e~~~~~  121 (399)
                      +++|+|++|+++++..+++|+|+||||++|++....+   .+.++||++|++|+|||||+|+|+.++  +....++++..
T Consensus         1 ~~li~n~~vv~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~~~   77 (458)
T 1gkp_A            1 PLLIKNGEIITADSRYKADIYAEGETITRIGQNLEAP---PGTEVIDATGKYVFPGFIDPHVHIYLPFMATFAKDTHETG   77 (458)
T ss_dssp             CEEEESCEEEETTEEEECEEEESSSBCCEEESCCCCC---TTCEEEECTTSEEEECEEEEEECSSCEETTEECSCCHHHH
T ss_pred             CEEEEeeEEECCCCceEeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEecCEEecccCCCcCCCCCcCHhHHHHH
Confidence            3689999999988767899999999999999754321   246799999999999999999999875  33356788888


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCC
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG  201 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~  201 (399)
                      ++.++++||||+++++ +..+.....+.++...+.......++++++........+..++++++++.|+..+|+++.+++
T Consensus        78 ~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  156 (458)
T 1gkp_A           78 SKAALMGGTTTYIEMC-CPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEKTEGQLREIVADGISSFKIFLSYKN  156 (458)
T ss_dssp             HHHHHHTTEEEEEEEE-CCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECCCCCTTHHHHHHHHHHTTCCEEEEEECSTT
T ss_pred             HHHHHhCCccEEEeCC-CCCCCCCHHHHHHHHHHHhccCceeeEEEEEeecCCchhhHHHHHHHHHhCCCEEEEEeccCC
Confidence            8999999999999987 443444455666666555555566777776554433445678888888899999998877642


Q ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhcc
Q 015826          202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT  281 (399)
Q Consensus       202 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~  281 (399)
                         ...+++++++++++.|+++|+++++|+++...+........ ..+......+...+|..+|..++.+++.+++..  
T Consensus       157 ---~~~~~~~~l~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~-~~G~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~--  230 (458)
T 1gkp_A          157 ---FFGVDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLL-SEGKTGPEWHEPSRPEAVEAEGTARFATFLETT--  230 (458)
T ss_dssp             ---TTBCCHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHH-HTTCCSGGGTTTTSCHHHHHHHHHHHHHHHHHH--
T ss_pred             ---CcCCCHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHHHHHHH-hcCCCChhhccCcCCHHHHHHHHHHHHHHHHHh--
Confidence               24578999999999999999999999988765432221100 112233344556789999999999999998876  


Q ss_pred             CCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC---CCcceEEcCCCCChhhHHHHHHHHh
Q 015826          282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALM  358 (399)
Q Consensus       282 ~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~---~~~~~~~~Pplr~~~~~~~l~~~l~  358 (399)
                           |.++|++|+++. ++++.++.+|++|+.+++++||||++++.+.+..   .+..++++||+|.++++++||++++
T Consensus       231 -----g~~~~~~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~p~r~~~~~~~l~~~~~  304 (458)
T 1gkp_A          231 -----GATGYVVHLSCK-PALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVEAMKYIMSPPLRDKRNQKVLWDALA  304 (458)
T ss_dssp             -----TCEEEECSCCSH-HHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHHHHHTTCCSSCCCCTHHHHHHHHHHH
T ss_pred             -----CCCEEEEeCCCH-HHHHHHHHHHHcCCeEEEEecccceeeCHHHhcccccCCcceEEeCCCCCHHHHHHHHHHHh
Confidence                 899999999998 8899999999999999999999999998776532   2445678999999999999999999


Q ss_pred             cCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          359 DGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       359 ~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +|.+++++|||+|++.+.|..+.++|+.+|+|++|+|+.+
T Consensus       305 ~G~~~~~gtD~~~~~~~~k~~~~~~~~~~~~g~~g~~~~l  344 (458)
T 1gkp_A          305 QGFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRV  344 (458)
T ss_dssp             TTSSCEEECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHH
T ss_pred             cCCeeEEECCCCCCCHHHhhcccCChhhCCCCcccHHHHH
Confidence            9999999999999998777655568999999999998753

>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6

Probab=100.00  E-value=1.6e-45  Score=370.88  Aligned_cols=342  Identities=20%  Similarity=0.246  Sum_probs=265.1

Q ss_pred             CCccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC--CCcCch
Q 015826           41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGF  118 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~--~~~e~~  118 (399)
                      ++++++|+|++|+++++..+++|+|+||||++|++....+   .+.++||++|++|||||||+|+|+.++..  .+.+++
T Consensus         6 ~~~~~lI~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~---~~~~vIDa~G~~v~PGlID~H~H~~~~~~~~~~~e~~   82 (521)
T 2ftw_A            6 QTGTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPK---EGIKVVDATDKLLLPGGIDTHTHFQLPFMGTVSVDDF   82 (521)
T ss_dssp             -CCCEEEESCEEECSSCEEECEEEEETTEEEEEESCCCCC---SSCCEEECTTCEEEECEEEEEECTTCEETTEECSSCH
T ss_pred             ccCCEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEECCCCEEecCEEeeecccCcCCCCccCHHHH
Confidence            3468999999999988777899999999999999754322   24579999999999999999999987632  356788


Q ss_pred             HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHH-HcCCcEEEEee
Q 015826          119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFM  197 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~~~ik~~~  197 (399)
                      +..++.++++||||++++.. ..+.....+.++.....+.....++++++...........+++++++ +.|+..+|.++
T Consensus        83 ~~~~~~a~~~G~Ttv~d~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~~l~~l~~~~G~~~~k~~~  161 (521)
T 2ftw_A           83 DIGTQAAVAGGTTFIIDFVI-PTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWSEQVSREMEILVKERGVNSFKCFM  161 (521)
T ss_dssp             HHHHHHHHHTTEEEEEEEEC-CCTTCCHHHHHHHHHHHHHTTCSSEEEEEEECCSCCHHHHHHHHHHHHHSCCCEEEEES
T ss_pred             HHHHHHHHhCCcceecCcCC-CCCCcCHHHHHHHHHHHhhcCceeeEeeEEeecCCChhHHHHHHHHHHhCCCCEEEEEe
Confidence            88999999999999999862 22223335555555444444556677777654433444567777777 47999999988


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHh
Q 015826          198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK  277 (399)
Q Consensus       198 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~  277 (399)
                      .+.+   ...+++++++++++.|+++|+++++|+++.+.+...+.... +.+......+...+|+..|..++.+.+.+++
T Consensus       162 ~~~~---~~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~~l~-~~G~~~~~~h~~~~~~~~e~~a~~~~~~la~  237 (521)
T 2ftw_A          162 AYKN---SFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKML-EMGITGPEGHELSRPEALEAEATNRAIVIAD  237 (521)
T ss_dssp             SCTT---TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTHHHHHHSCTHHHHHHHHHHHHHHH
T ss_pred             ccCC---CcCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH-HcCCCChhhccccCcHHHHHHHHHHHHHHHH
Confidence            7642   23579999999999999999999999998754322221110 1122222223345788888888889899888


Q ss_pred             hhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC----CCcceEEcCCCCC-hhhHHH
Q 015826          278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRD-AANKEK  352 (399)
Q Consensus       278 ~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~----~~~~~~~~Pplr~-~~~~~~  352 (399)
                      .+       ++|+|+.|+++. .+++.|+++|++|+.+++++||+||.++...+..    .+..++++||+|+ ++++++
T Consensus       238 ~~-------~~p~hi~h~ss~-~~~~~i~~~r~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~Pplr~~~~~~~~  309 (521)
T 2ftw_A          238 SV-------CTPVYIVHVQSI-GAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGV  309 (521)
T ss_dssp             HH-------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCSSHHHHHTTCCSSCCCCCTTHHHH
T ss_pred             Hh-------CCCEEEEecCcH-HHHHHHHHHHHcCCeEEEEEcchhhccCHHHhcCCCcccCcceEEcCCCCCChhhHHH
Confidence            76       899999999998 8999999999999999999999999998765532    2346789999998 789999


Q ss_pred             HHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          353 LWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       353 l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      ||+++.+|.+++++|||+||...+|..+.++|..+|+|++|+|+.+
T Consensus       310 l~~~l~~g~~~~~gsD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l  355 (521)
T 2ftw_A          310 LMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRM  355 (521)
T ss_dssp             HHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHH
T ss_pred             HHHHhcCCCEEEEEeCCCCCCHHHhhcccCChhhCCCCCccHHHHH
Confidence            9999999999999999999998877665568999999999999743

>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}

Probab=100.00  E-value=2e-44  Score=364.52  Aligned_cols=345  Identities=20%  Similarity=0.232  Sum_probs=262.5

Q ss_pred             CCccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCC-CCCCcEEeCCCCEEecceeecccccCCCCC--CCcCc
Q 015826           41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEG  117 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~-~~~~~vID~~G~~vlPGlID~H~H~~~~~~--~~~e~  117 (399)
                      ++++++|+|++|++++...+++|+|+||||++|++....+.. ..+.++||++|++|||||||+|+|+.++..  .+.++
T Consensus        25 ~~~~~lI~ng~Vv~~~~~~~~dV~I~dGrI~~Ig~~~~~~~~~~~~~~vIDa~G~~V~PG~ID~H~Hl~~~~~~~~~~e~  104 (541)
T 2vr2_A           25 APSRLLIRGGRVVNDDFSEVADVLVEDGVVRALGHDLLPPGGAPAGLRVLDAAGKLVLPGGIDTHTHMQFPFMGSRSIDD  104 (541)
T ss_dssp             --CEEEEESCEEECSSCEEECEEEEETTEEEEEEC-----------CEEEECTTSEEEECEEEEEECTTCBCSSSBCSCC
T ss_pred             ccCCEEEECcEEEcCCCceEeeEEEECCEEEEeccCCCCCcccccCceEEECCCCEEccCEEEecccCCCCCCCCcCHHH
Confidence            356899999999998877789999999999999975432110 012379999999999999999999987642  35678


Q ss_pred             hHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHH-cCCcEEEEe
Q 015826          118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN-AGVLGLKSF  196 (399)
Q Consensus       118 ~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~G~~~ik~~  196 (399)
                      ++..++.++++||||++|+.. ..+.....+.++...........++++++...........++++++++ .|+..+|.+
T Consensus       105 ~~~~~~~al~~GvTtv~d~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~~~~~~~~~~el~~l~~~~G~~~~k~~  183 (541)
T 2vr2_A          105 FHQGTKAALSGGTTMIIDFAI-PQKGGSLIEAFETWRSWADPKVCCDYSLHVAVTWWSDQVKEEMKILVQDKGVNSFKMF  183 (541)
T ss_dssp             TTHHHHHHHTTTEEEEEEEEC-CCTTCCHHHHHHHHHHHHTTTCSSEEEEEEEECSCSHHHHHHHHHHHHTSCCCEEEEE
T ss_pred             HHHHHHHHHhCCeeeeccccC-CCCCCCHHHHHHHHHHHhccCceEEEeeeecccCCCHHHHHHHHHHHHhCCCCEEEEE
Confidence            888899999999999999862 222233455565555444445566777776544444445677887775 699999999


Q ss_pred             ecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHH
Q 015826          197 MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA  276 (399)
Q Consensus       197 ~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a  276 (399)
                      +.+.+   ...+++++++++++.|+++|+++++|+++.+.+...+.... +.+......+...+|+..|..++.+.+.++
T Consensus       184 ~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~~~~~~~~~l~-~~G~~~~~~h~~~~~~~~e~~a~~~~~~la  259 (541)
T 2vr2_A          184 MAYKD---LYMVTDLELYEAFSRCKEIGAIAQVHAENGDLIAEGAKKML-ALGITGPEGHELCRPEAVEAEATLRAITIA  259 (541)
T ss_dssp             SSSTT---TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHH
T ss_pred             eccCC---ccCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHH-HcCCCChhhccccchhHHHHHHHHHHHHHH
Confidence            87643   23578999999999999999999999988754322211110 112222222334678888888999999999


Q ss_pred             hhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC----CCcceEEcCCCCC-hhhHH
Q 015826          277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD----GDTRFKCAPPIRD-AANKE  351 (399)
Q Consensus       277 ~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~----~~~~~~~~Pplr~-~~~~~  351 (399)
                      +.+       ++|+|+.|+++. ..+++|+++|++|+.++++++++||.++...+..    .+..++++||||+ +++++
T Consensus       260 ~~~-------~~p~~~~h~ss~-~~~~~i~~ar~~G~~v~~e~~~~~L~~d~~~~~~~~~~~~~~~~~~pplr~~~~~~~  331 (541)
T 2vr2_A          260 SAV-------NCPLYIVHVMSK-SAAKVIADARRDGKVVYGEPIAASLGTDGTHYWNKEWHHAAHHVMGPPLRPDPSTPD  331 (541)
T ss_dssp             HHH-------TCCEEEEEECCH-HHHHHHHHHHHTTCCEEEEEBHHHHHCCSGGGGCSSHHHHHTTCCSSCCCSCTTHHH
T ss_pred             HHh-------CCCEEEEeCCCH-HHHHHHHHHHHcCCeEEEEeehhhhcCCHHHhcCccccccCceEECCCCCCCcchHH
Confidence            876       899999999998 8999999999999999999999999988764422    1345789999998 78999


Q ss_pred             HHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          352 KLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       352 ~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +||+++.+|.+++++|||+||...+|..+.++|..+|+|++|+|+.+
T Consensus       332 ~l~~~l~~g~~~~~gtD~~~~~~~~k~~~~~~~~~~p~G~~G~e~~l  378 (541)
T 2vr2_A          332 FLMNLLANDDLTTTGTDNCTFNTCQKALGKDDFTKIPNGVNGVEDRM  378 (541)
T ss_dssp             HHHHHHHTTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHH
T ss_pred             HHHHHHhcCCeEEEEeCCCCCChHHhcccCCChhhCCCCCccHHHHH
Confidence            99999999999999999999998888766678999999999999743

>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6

Probab=100.00  E-value=5e-44  Score=354.47  Aligned_cols=337  Identities=28%  Similarity=0.464  Sum_probs=267.2

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC-CCCcCchHH
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RTEWEGFPS  120 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~~~~e~~~~  120 (399)
                      |++++|+|++|+++++..+++|+|+||||++|++....+   .+.++||++|++|+|||||+|+|+..++ +.+.+++..
T Consensus         1 m~~~li~~~~v~~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~~~   77 (458)
T 1gkr_A            1 MFDVIVKNCRLVSSDGITEADILVKDGKVAAISADTSDV---EASRTIDAGGKFVMPGVVDEHVHIIDMDLKNRYGRFEL   77 (458)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEEEETTEEEEEESCCTTC---CEEEEEECTTCEEEECEEEEEEECCCGGGTTTSCCHHH
T ss_pred             CceEEEECcEEECCCCceeeeEEEECCEEEEecCCCCCC---CCCeEEeCCCCEEecCEEEeeecccCCCCCCchhHHHH
Confidence            458899999999987767899999999999998753211   2457999999999999999999998766 556778888


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPS  200 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~  200 (399)
                      .++.++++||||++++++++.|.....+.+...++...... ++++++.+...   +..++++++++.|+.++|+++.++
T Consensus        78 ~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~g~~~i~~~~~~~  153 (458)
T 1gkr_A           78 DSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLK-VDFALYGGGVP---GNLPEIRKMHDAGAVGFKSMMAAS  153 (458)
T ss_dssp             HHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS-SEEEEEEECCT---TCHHHHHHHHHTTCCEEEEESSCS
T ss_pred             HHHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCc-eeEEEEeccCC---CCHHHHHHHHHcCCcEEEEeeccc
Confidence            89999999999999997434454555677777766665555 67766654432   235678888889999999987764


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhH---HhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHh
Q 015826          201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH---VKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK  277 (399)
Q Consensus       201 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~  277 (399)
                      .....+..+.++++++++.|+++|+++.+|+++...+...   +.+.|    ......|...+|..+|...+.+++.+++
T Consensus       154 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~G----~~~~~~h~~~~~~~~~~~~~~~~~~la~  229 (458)
T 1gkr_A          154 VPGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIKAAG----GKDMAAYEASQPVFQENEAIQRALLLQK  229 (458)
T ss_dssp             BTTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHTT----CCSHHHHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             CCCCcccCCHHHHHHHHHHHHHcCCEEEEECCCHHHHHHHHHHHhhcC----ccchhhccccCCHHHHHHHHHHHHHHHH
Confidence            2111346799999999999999999999999887654321   12222    1112223445678888889999999998


Q ss_pred             hhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHH
Q 015826          278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEAL  357 (399)
Q Consensus       278 ~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l  357 (399)
                      +.       |+++|+.|+++. ..++.++++|+.|+++++++||||++++.+.+...+..++++||+|...+++++|+++
T Consensus       230 ~~-------g~~~h~~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~l~~~~  301 (458)
T 1gkr_A          230 EA-------GCRLIVLHVSNP-DGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPYMKVAPPVRSAEMNIRLWEQL  301 (458)
T ss_dssp             HH-------CCEEEECCCCSH-HHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHHHGGGGCCSSCCCCHHHHHHHHHHH
T ss_pred             Hh-------CCCEEEEeCCCH-HHHHHHHHHHHCCCcEEEEEchHHheeCHHHhhccCceEEEcCCCCCHHHHHHHHHHH
Confidence            75       889999999997 8899999999999999999999999998776544456789999999999999999999


Q ss_pred             hcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhccc
Q 015826          358 MDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG  397 (399)
Q Consensus       358 ~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~  397 (399)
                      ++|.+++++|||+|++...|..+..+|+.++.|++|+|+.
T Consensus       302 ~~G~~~~lgtD~~~~~~~~k~~g~~~~~~~~~~~~g~~~~  341 (458)
T 1gkr_A          302 ENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETS  341 (458)
T ss_dssp             HHTCCCEECCCEECCCGGGTGGGGTCGGGSCCCBCCTTTH
T ss_pred             hCCCceEEEeCCCCCChHHhccccCCHhHCCCCcccHHHH
Confidence            9999999999999998877764435788889999999864

>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6

Probab=100.00  E-value=7e-43  Score=346.32  Aligned_cols=336  Identities=26%  Similarity=0.358  Sum_probs=265.9

Q ss_pred             cEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCC-CCCC-CcCchHHH
Q 015826           44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD-PGRT-EWEGFPSG  121 (399)
Q Consensus        44 ~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~-~~~~-~~e~~~~~  121 (399)
                      +++|+|++|+++++..+++|+|+||||++|++..+     ++.++||++|++|+|||||+|+|+.+ ++.. ..++++..
T Consensus         2 ~~li~n~~v~~~~~~~~~~v~I~~g~I~~ig~~~~-----~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~~~   76 (457)
T 1nfg_A            2 DIIIKNGTIVTADGISRADLGIKDGKITQIGGALG-----PAERTIDAAGRYVFPGGIDVHTHVETVSFNTQSADTFATA   76 (457)
T ss_dssp             CEEEEEEEEEETTEEEEEEEEEETTEEEEESSCCC-----CCSEEEECTTCEEEECEEEEEECCSCEETTEECSCCHHHH
T ss_pred             cEEEEeeEEEeCCCceeeeEEEECCEEEEecCCCC-----CCCeEEeCCCCEEccceEeeccccccCcCCCCChhhHHHH
Confidence            68999999999887678999999999999987432     24579999999999999999999974 3332 56788888


Q ss_pred             HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCC
Q 015826          122 TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSG  201 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~  201 (399)
                      ++.++++||||+++++ ++.|.....+.++...+.......++++++......+.+..++++++.+.|+.++|.++.+..
T Consensus        77 ~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~k~~~~~~~  155 (457)
T 1nfg_A           77 TVAAACGGTTTIVDFC-QQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTDSVIEELEVLPDLGITSFKVFMAYRG  155 (457)
T ss_dssp             HHHHHHTTEEEEEEEE-ECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSSCCHHHHHHTTTGGGGTCCEEEEESSSTT
T ss_pred             HHHHHhCCcEEEEeCC-CCCCCCChHHHHHHHHHHhcccCccCEEEEEeecCCchhHHHHHHHHHHcCCCEEEEeeccCC
Confidence            9999999999999998 444555566777776666655666788777665444444455676777889999999876542


Q ss_pred             CCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhcc
Q 015826          202 INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT  281 (399)
Q Consensus       202 ~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~  281 (399)
                         ....+.+++.++++.++++|+++.+|+++...+...+.... ..+......|...+|..+|...+.++++++++.  
T Consensus       156 ---~~~~~~~~~~~~~~~a~~~~~~v~~H~e~~~~~~~~~~~~~-~~g~~~~~~h~~~~~~~~~~~~~~~~~~~a~~~--  229 (457)
T 1nfg_A          156 ---MNMIDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFV-AEGKTAPIYHALSRPPRVEAEATARALALAEIV--  229 (457)
T ss_dssp             ---TTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHH-HTTCCSTHHHHHTSCHHHHHHHHHHHHHHHHHH--
T ss_pred             ---CCCCCHHHHHHHHHHHHhcCCEEEEeCCCHHHHHHHHHHHH-hcCCcchhhccccCCHHHHHHHHHHHHHHHHHH--
Confidence               12357889999999999999999999998765543321100 011112222334678888899999999999986  


Q ss_pred             CCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC---CCcceEEcCCCCChhhHHHHHHHHh
Q 015826          282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD---GDTRFKCAPPIRDAANKEKLWEALM  358 (399)
Q Consensus       282 ~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~---~~~~~~~~Pplr~~~~~~~l~~~l~  358 (399)
                           |+++|+.|+++. +.++.++.+|+.|.+++++++||+++++.+.+..   .+..++++||+|...+++.+|++++
T Consensus       230 -----g~~~~~~H~~~~-~~~~~~~~~~~~G~~v~~~~~~h~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~~~~~~~~~  303 (457)
T 1nfg_A          230 -----NAPIYIVHVTCE-ESLEEVMRAKSRGVRALAETCTHYLYLTKEDLERPDFEGAKYVFTPPARAKKDHDVLWNALR  303 (457)
T ss_dssp             -----TCCEEECCCCSH-HHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGCTTTGGGGGCCSSCCCCHHHHHHHHHHHH
T ss_pred             -----CCCEEEEeCCcH-HHHHHHHHHHHcCCeEEEEEchHHhEeCHHHhccccccCceeEEcCCCCCHHHHHHHHHHHh
Confidence                 899999999987 8899999999999999999999999998876543   4677899999999999999999999


Q ss_pred             cCCccEEeCCCCCCCcc-cccCCcCCcccccCCcchhccc
Q 015826          359 DGHIDMLSSDHSPTVPE-LKLLDEGNFLKAWGGISSLQVG  397 (399)
Q Consensus       359 ~G~id~i~sdh~p~~~~-~k~~~~~~~~~~~~G~~g~e~~  397 (399)
                      +|.+++++|||+|++.. +|..+.++|+.+++|++|.|+.
T Consensus       304 ~G~~~~~gtD~~~~~~~~~k~~~~~~~~~~~~g~~g~e~~  343 (457)
T 1nfg_A          304 NGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEER  343 (457)
T ss_dssp             TTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTH
T ss_pred             CCCeEEEecCCCCCChHHhhhcccCCHhHCCCCcccHHHH
Confidence            99999999999998765 5554446799999999999864

>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}

Probab=100.00  E-value=6.3e-43  Score=343.39  Aligned_cols=323  Identities=32%  Similarity=0.419  Sum_probs=254.0

Q ss_pred             EEEEccEEEcCCC-ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHHHHH
Q 015826           45 YWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTK  123 (399)
Q Consensus        45 ~li~n~~vv~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~  123 (399)
                      ++|+|++|+++++ ..+++|+|+||||++|++.   +    +.++||++|++|+|||||+|+|+..++....+++...++
T Consensus         2 ~~i~~~~v~~~~~~~~~~~v~i~~g~I~~i~~~---~----~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~~~   74 (426)
T 2z00_A            2 ILIRNVRLVDARGERGPADVLIGEGRILSLEGG---E----AKQVVDGTGCFLAPGFLDLHAHLREPGEEVKEDLFSGLL   74 (426)
T ss_dssp             EEEEEEEEEETTEEEEEEEEEEETTEEEESBCC---C----CSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHHHHH
T ss_pred             EEEEeeEEECCCCceecceEEEECCEEEEEecC---C----CceEEeCCCCEEecCEEEeccccCCCCCCchHHHHHHHH
Confidence            6899999999876 3579999999999999864   1    457999999999999999999999877666678888899


Q ss_pred             HHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC-ChhhHHHHHHHHHcCCcEEEEeecCCCC
Q 015826          124 AAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLKSFMCPSGI  202 (399)
Q Consensus       124 ~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik~~~~~~~~  202 (399)
                      .++++||||+++++ ++.+.....+.++...+.....+.+++.+++++.+. ..+..++++++.+.|+.+++.       
T Consensus        75 ~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~i~~-------  146 (426)
T 2z00_A           75 AAVRGGYTDLVSMP-NTKPPVDTPEAVRALKEKAKALGLARLHPAAALTEKQEGKTLTPAGLLREAGAVLLTD-------  146 (426)
T ss_dssp             HHHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHTSSEECCEECSBGGGCSSSBCCHHHHHHHTCCEEEC-------
T ss_pred             HHHhCCccEEEecC-CCCCCcChHHHHHHHHHHhcccCcccEEEEEEeecCCChhhHHHHHHHHHcCCEEEEC-------
Confidence            99999999999998 444544555666666655544333455444333221 112234566666678877753       


Q ss_pred             CCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhh----
Q 015826          203 NDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD----  278 (399)
Q Consensus       203 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~----  278 (399)
                      +..+..+.+.++++++.|+++|+++.+|+++.........+    .+......++.++|..+|...+.+++.++++    
T Consensus       147 ~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~----~g~~~~~~g~~~~~~~~e~~~~~~~~~~a~~~~~~  222 (426)
T 2z00_A          147 DGRTNEDAGVLAAGLLMAAPLGLPVAVHAEDAGLRRNGVMN----DGPLADLLGLPGNPPEAEAARIARDLEVLRYALRR  222 (426)
T ss_dssp             TTSCCCCHHHHHHHHHHHGGGTCCEEECCCCHHHHTTCSEE----CSHHHHHHTCCEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCHHHHHHHHHHHHhhCCEEEEeCCCHHHHhhhhhc----cCccchhcccccCChHHHHHHHHHHHHHHhhcccc
Confidence            12235789999999999999999999999876643211111    1233444566778989998888888888875    


Q ss_pred             --hccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHH
Q 015826          279 --TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEA  356 (399)
Q Consensus       279 --~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~  356 (399)
                        .       +.++|+.|+++. ++++++++++++|+.|++++||||++++.+.+...+..++++||+|+++++++||++
T Consensus       223 ~~~-------g~~~~i~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~plr~~~~~~~l~~~  294 (426)
T 2z00_A          223 SPA-------TPRLHVQHLSTK-RGLELVREAKRAGLPVTAEATPHHLTLTEEALRTFDPLFKVAPPLRGEEDREALLEG  294 (426)
T ss_dssp             CSS-------CCCEEETTCCCH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGGGCCGGGCCSSCCCCHHHHHHHHHH
T ss_pred             ccC-------CCcEEEEeCCCH-HHHHHHHHHHHcCCCEEEEEchHHhEeCHhHhhccCceEEEeCCCCCHHHHHHHHHH
Confidence              4       789999999997 889999999999999999999999999877665566778999999999999999999


Q ss_pred             HhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhccc
Q 015826          357 LMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG  397 (399)
Q Consensus       357 l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~  397 (399)
                      +++|.+++++|||+|++..+|.   ++|+.+|.|++++|+.
T Consensus       295 l~~G~~~~lgsD~~p~~~~~~~---~~~~~~~~g~~~~~~~  332 (426)
T 2z00_A          295 LLDGTLDAIATDHAPHTLAEKE---KDLLRAPFGIPSLEVA  332 (426)
T ss_dssp             HHHTSSCEECCCBCCCCTTGGG---SCTTTSCCCBCCTTTH
T ss_pred             HhCCCcEEEecCCCCCCHHHcc---CChhhCCCCcccHHHH
Confidence            9999999999999999887764   4788999999998875

>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*

Probab=100.00  E-value=1.7e-44  Score=344.77  Aligned_cols=263  Identities=18%  Similarity=0.220  Sum_probs=209.5

Q ss_pred             CCCEEecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCc--eeEEeee
Q 015826           92 GEAVIMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY--VDVGFWG  169 (399)
Q Consensus        92 ~G~~vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~  169 (399)
                      ++++|+||+||+|+|+++ |..     ....++++++||||+++|+ ++.|...+.+.+..+.+.+.....  +++.+++
T Consensus         4 ~~~~v~PG~ID~HvH~~~-g~~-----~~e~~aa~~gGvTtvv~mp-nt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (347)
T 2z26_A            4 SQVLKIRRPDDWHLHLRD-GDM-----LKTVVPYTSEIYGRAIVMP-NLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLM   76 (347)
T ss_dssp             CCEEEEECCCEEEECCCS-HHH-----HHHHHHHHHTTCSEEEECC-CCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEEE
T ss_pred             CCeEECCCcceeeecCCC-CCc-----hhhHHHHHhCCCCEEEECC-CCCCCCCCHHHHHHHHHHHhcccCCcccEEEEE
Confidence            568999999999999988 532     3456889999999999999 888888888888888777665433  4455555


Q ss_pred             eeeCCChhhHHHHHHHHHcCC-cEEEEeecCCCCC-CCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCc
Q 015826          170 GLVPENAYNASALEALLNAGV-LGLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDT  247 (399)
Q Consensus       170 ~~~~~~~~~~~~l~~l~~~G~-~~ik~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~  247 (399)
                      ++........+++.++.+.|+ .+||+|+.+.+.+ +.+..+++.|++++++++++|+++.+|+|+.+..          
T Consensus        77 ~~~~~~~~~~~ei~~l~~~G~~~g~K~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vH~ed~~~~----------  146 (347)
T 2z26_A           77 TCYLTDSLDPNELERGFNEGVFTAAKLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHAD----------  146 (347)
T ss_dssp             EEECCTTCCHHHHHHHHHTTSEEEEEECCCCTTCCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCCCCTT----------
T ss_pred             EEEeCCCCCHHHHHHHHHCCCeEEEEEeecCCcCCCCCccCCHHHHHHHHHHHHHhCCEEEEEecCCccc----------
Confidence            542222224678888889998 7999998875322 2345688899999999999999999999986410          


Q ss_pred             CCchhhhcCCCCCChHHHHHHHHHHH--HHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccc
Q 015826          248 LDTRSYSTYLKTRPPSWEEAAIRELL--TVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLA  325 (399)
Q Consensus       248 ~~~~~~~~~~~~~p~~~E~~~v~~~~--~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~  325 (399)
                      .+           +..+|..++.+.+  .+++.       +|+|+|++|+|++ +++++|+++|   .+||||+|||||+
T Consensus       147 ~~-----------~~~~E~~~~~~~i~~~la~~-------~~~~~hi~Hvst~-~~~~~i~~ak---~~Vt~e~~ph~L~  204 (347)
T 2z26_A          147 ID-----------IFDREARFIESVMEPLRQRL-------TALKVVFEHITTK-DAADYVRDGN---ERLAATITPQHLM  204 (347)
T ss_dssp             SC-----------GGGHHHHHHHHTHHHHHHHS-------TTCCEEECSCCSH-HHHHHHHTSC---TTEEEEECHHHHH
T ss_pred             cC-----------HHHHHHHHHHHHHHHHHHhh-------cCCcEEEEECCcH-HHHHHHHHhC---CCceEeecchHhe
Confidence            00           1124666788877  57775       4999999999999 9999999886   4899999999999


Q ss_pred             cccccCC--CCCcceEEcCCCCChhhHHHHHHHHhcCCcc-EEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          326 FSAEEIP--DGDTRFKCAPPIRDAANKEKLWEALMDGHID-MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       326 ~~~~~~~--~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id-~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      |+++++.  .+++.+||+||||++++|++||+++.+|.|| +|+|||+||..++|..   +|.  ++|+.|+|++|
T Consensus       205 l~~~~~~~~~~~~~~k~~PPLR~~~d~~aL~~~l~~G~id~~i~SDhaP~~~~~K~~---~~g--~~Gi~~~e~~l  275 (347)
T 2z26_A          205 FNRNHMLVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKES---SCG--CAGCFNAPTAL  275 (347)
T ss_dssp             CCHHHHHTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHSS---SSB--CCCCCCTTTHH
T ss_pred             ecHHHhcCcCCCccEEEeCCCCCHHHHHHHHHHHhcCCCCeEEecCCCCCCHHHhcC---CCC--CCCcCcHHHHH
Confidence            9988874  3688999999999999999999999999999 8999999999888863   332  57888889863

>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A

Probab=100.00  E-value=2e-42  Score=347.09  Aligned_cols=340  Identities=21%  Similarity=0.238  Sum_probs=261.0

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC--CCcCchH
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR--TEWEGFP  119 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~--~~~e~~~  119 (399)
                      +++++|+|++|+++++..+++|+|+||||++|++....+   .+.++||++|++|+|||||+|+|+..+.+  .+.++++
T Consensus        25 ~~~~li~n~~v~~~~~~~~~~V~I~~grI~~Ig~~~~~~---~~~~vID~~G~~v~PGlID~H~H~~~~~~~~~~~e~~~  101 (501)
T 2vm8_A           25 SDRLLIKGGKIVNDDQSFYADIYMEDGLIKQIGENLIVP---GGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFF  101 (501)
T ss_dssp             CCCEEEEEEEEECSSCEEEEEEEEETTEEEEEESSCCCC---SSSCEEECTTCEEEECEEEEEECTTCEETTEECSSCHH
T ss_pred             cCCEEEEeeEEECCCCceEeeEEEECCEEEEeccCCCCC---CCCeEEECCCCEEeeCEEEeeecccccccCCCcHHHHH
Confidence            468999999999988767899999999999999754321   24579999999999999999999987532  3467888


Q ss_pred             HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHH-HcCCcEEEEeec
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL-NAGVLGLKSFMC  198 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~-~~G~~~ik~~~~  198 (399)
                      ..+++++++||||+++++ ++.+.....+.++...+........+++++...........+++++++ +.|+.++|.++.
T Consensus       102 ~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~l~~~~G~~~i~~~~~  180 (501)
T 2vm8_A          102 QGTKAALAGGTTMIIDHV-VPEPGTSLLAAFDQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALVKDHGVNSFLVYMA  180 (501)
T ss_dssp             HHHHHHHHTTEEEEEEEE-CCCTTSCHHHHHHHHHHHHHHHCSSEEEEEEECCSCSHHHHHHHHHHHHHSCCCEEEEESS
T ss_pred             HHHHHHHhCCcEEEEeCC-CCCCCCChHHHHHHHHHHHhcCCeeEEEEEEEecCCCcccHHHHHHHHHhCCceEEEEeec
Confidence            889999999999999997 444434445556655544433345566665543322333456677777 479999998876


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhh
Q 015826          199 PSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD  278 (399)
Q Consensus       199 ~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~  278 (399)
                      +..   ....+.++++++++.|+++|+++.+|+++...+...+.... +.+......+...+|..+|..++.+.+.++++
T Consensus       181 ~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~e~~~~~~~~~~~~~-~~G~~~~~~~~~~~~~~~~~~~i~~~~~l~~~  256 (501)
T 2vm8_A          181 FKD---RFQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRIL-DLGITGPEGHVLSRPEEVEAEAVNRAITIANQ  256 (501)
T ss_dssp             STT---TTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHH-TTTCCSTHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred             cCC---CCCCCHHHHHHHHHHHHHhCCEEEEEccChHHHHHHHHHHH-hcCCCChhhccccCCHHHHHHHHHHHHHHHHH
Confidence            542   13578999999999999999999999998654322221110 11222222334467888888899999999987


Q ss_pred             hccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCC----CcceEEcCCCCCh-hhHHHH
Q 015826          279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG----DTRFKCAPPIRDA-ANKEKL  353 (399)
Q Consensus       279 ~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~----~~~~~~~Pplr~~-~~~~~l  353 (399)
                      .       ++++|+.|+++. +++++|+.+|+.|+.+++++++|||+++...+...    +..++++||+|.+ .++++|
T Consensus       257 ~-------g~~~hi~h~~~~-~~~~~i~~~~~~G~~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~pp~r~~~~~~~~l  328 (501)
T 2vm8_A          257 T-------NCPLYITKVMSK-SSAEVIAQARKKGTVVYGEPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFL  328 (501)
T ss_dssp             H-------TCCEEEEEECCH-HHHHHHHHHHHTTCCEEEEEBHHHHHCCGGGGGCSSHHHHHHTCCSSCCCSCTTHHHHH
T ss_pred             h-------CCcEEEEeCCcH-HHHHHHHHHHhCCCcEEEEEChhHhhcChhhhcccccccCceEEECCCCCCCcchHHHH
Confidence            5       899999999998 88999999999999999999999999987655321    2357889999987 689999


Q ss_pred             HHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhccc
Q 015826          354 WEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG  397 (399)
Q Consensus       354 ~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~  397 (399)
                      |+++++|.+++++|||+|++..+|..+.++|...|.|++|.|+.
T Consensus       329 ~~~l~~G~~~~~gtD~~~~~~~~~~~~~~~~~~~~~G~~g~e~~  372 (501)
T 2vm8_A          329 NSLLSCGDLQVTGSAHCTFNTAQKAVGKDNFTLIPEGTNGTEER  372 (501)
T ss_dssp             HHHHHHTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTH
T ss_pred             HHHHhcCceEEEEecCCCCChhhhhcccCChhhCCCCCccHHHH
Confidence            99999999999999999998776655456788899999999875

>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}

Probab=100.00  E-value=3.3e-42  Score=341.13  Aligned_cols=332  Identities=27%  Similarity=0.360  Sum_probs=260.3

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEecc-CCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHH
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVS-EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS  120 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~-~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~  120 (399)
                      ||+++|+|++|+++++..+++|+|+||||++|++ ........++.++||++|++|+|||||+|+|+..++..+.++++.
T Consensus         3 ~m~~li~~~~v~~~~~~~~~~v~i~~g~I~~i~~~~~~~~~~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~e~~~~   82 (452)
T 2gwn_A            3 AMKILLRNALITNEGKTFPGSVMIDGAFISRIIEGELPADDNLSADEVIECSGLRLFPGCIDDQVHFREPGLTHKATIAS   82 (452)
T ss_dssp             CSEEEEEEEEEEETTEEEEEEEEEETTEEEEEEESCCCTTCCTTCSEEEECTTCEEEECEEEEEECCCTTTCTTTCCHHH
T ss_pred             cccEEEECeEEECCCceeeeeEEEECCEEEEEecCCCccccCCCCCeEEeCCCCEEecCEEeeccccCCCCCCcHHHHHH
Confidence            4688999999999876668999999999999987 432100012457999999999999999999999877667788999


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPS  200 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~  200 (399)
                      .++.++++||||+++++ ++.|.....+.++.+++.+.....++++++++..+..   .+++.++.+.|+.++|.++.+.
T Consensus        83 ~~~~~~~~GvTt~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~g~~g~k~~~~~~  158 (452)
T 2gwn_A           83 ESRAAVAGGVTSFMDMP-NTNPPTTMWERLLEKRQIGADTAWANYGFFFGGTNDN---IDEIKRVDKHLVPGLKLFLGSS  158 (452)
T ss_dssp             HHHHHHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEECEECCSSC---HHHHHTCCTTSCSCEEEESSSC
T ss_pred             HHHHHHhCCeEEEEcCC-CCCCCCChHHHHHHHHHHhhccCcccEEEEEeecCCC---HHHHHHHHHcCCCEEEEEeccC
Confidence            99999999999999998 6666666777887777776666778888887665443   3456666667889999987653


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHH----hhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHH
Q 015826          201 GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHV----KLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA  276 (399)
Q Consensus       201 ~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a  276 (399)
                      . ...+..+.+.++++++   +.+.++.+|+++.+.+...+    +..+...   ....|+..+|+.+|...++++++++
T Consensus       159 ~-~~~~~~~~~~~~~~~~---~~~~~~~~h~~~~~~~~~~~~~~~~~~G~~~---~~~~h~~~~~~~~~~~~l~~~~~la  231 (452)
T 2gwn_A          159 T-GNMLVDNKETLEKIFG---ECDLLIATHCEKEEIIRANKEHYKAKYGNDL---DIHFHPLIRSEEACYRSSAEAVELA  231 (452)
T ss_dssp             C-GGGBCCCHHHHHHHHH---HCCSCEEEECCCHHHHHHHHHHHHHHHCSCC---CGGGHHHHSCHHHHHHHHHHHHHHH
T ss_pred             C-CCcccCCHHHHHHHHH---HcCCEEEEcCCCHHHHHhHHhhhhhhcCccc---chhhccccCChHHHHHHHHHHHHHH
Confidence            2 1123446677776554   45889999999877654433    2222001   1222345678889999999999999


Q ss_pred             hhhccCCCCCCceEEEEcCCChhHHHHHHHH--H-HHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHH
Q 015826          277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLME--A-KTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKL  353 (399)
Q Consensus       277 ~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~--a-k~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l  353 (399)
                      +++       |+++|+.|+++. +.++.+++  + +++  +++++++||+++++++++...|..++++||+|..+++..+
T Consensus       232 ~~~-------g~~v~i~H~~~~-~~~~~~~~~~a~~~~--~v~~~~~~h~~~l~~~~~~~~g~~~~~~P~lr~~~~~~~l  301 (452)
T 2gwn_A          232 ERM-------NARLHILHLSTE-KELSLFRNDIPTAQK--RITSEVCVHHLWFSDTDYGRLGNRIKWNPAIKKESDREAL  301 (452)
T ss_dssp             HHH-------TCCEEECCCCCT-GGGGGSCCSSCGGGC--SEEEEEEHHHHHCCGGGHHHHGGGGCCSSCCCCHHHHHHH
T ss_pred             HHh-------CCCEEEEeCCCH-HHHHHHHHhhcccCC--CeEEEEchHHhhcCHHHHhccCceEEECCCCCCHHHHHHH
Confidence            986       899999999987 88888877  3 544  7899999999999988765457788999999999999999


Q ss_pred             HHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhccc
Q 015826          354 WEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG  397 (399)
Q Consensus       354 ~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~  397 (399)
                      |+++++|.+++++|||+|++..+|.   .+|+.+++|++|+|+.
T Consensus       302 ~~~l~~Gv~~~lgTD~~~~~~~~k~---~~~~~~~~g~~~~e~~  342 (452)
T 2gwn_A          302 RAAVRNGRIDIIATDHAPHLLREKE---GSCLQAASGGPLVQHS  342 (452)
T ss_dssp             HHHHHHSSSCEEECCBCCCCHHHHC---SCTTTSCCCCCCTTTH
T ss_pred             HHHHHCCCceEEEeCCCCCChHHhc---CChhhCCCCCccHHHH
Confidence            9999999999999999999887775   3799999999999974

>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*

Probab=100.00  E-value=5.2e-41  Score=333.99  Aligned_cols=331  Identities=26%  Similarity=0.356  Sum_probs=216.9

Q ss_pred             CCCCCccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCc
Q 015826           38 SLLPYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW  115 (399)
Q Consensus        38 ~~~~~~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~  115 (399)
                      +.++|++++|+|++|+++++  ..+++|+|+||||++|++... +   .+.++||++|++|+|||||+|+|+..++....
T Consensus        42 ~~~~mm~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~---~~~~~iD~~g~~v~PGlID~H~H~~~~~~~~~  117 (467)
T 1xrt_A           42 KDRWMLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNIL-V---PEAEIIDAKGLIVCPGFIDIHVHLRDPGQTYK  117 (467)
T ss_dssp             ----CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCC-C---SSEEEEECTTSEEEECEEEEEECCCTTTCTTT
T ss_pred             cccceeeEEEEeeEEECCCCCceecceEEEECCEEEEecCCCC-C---CCCcEEeCCCCEEccCEEEEeecccCCCCCch
Confidence            34567889999999998765  357899999999999987532 1   24579999999999999999999988766667


Q ss_pred             CchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC-ChhhHHHHHHHHHcCCcEEE
Q 015826          116 EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAYNASALEALLNAGVLGLK  194 (399)
Q Consensus       116 e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~l~~~G~~~ik  194 (399)
                      +++...++.++++||||+++++ ++.+.....+.++...+.....+.+++...+.+.+. ..+..++++++.+.|+.+++
T Consensus       118 ~~~~~~~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~l~~~g~~~i~  196 (467)
T 1xrt_A          118 EDIESGSRCAVAGGFTTIVCMP-NTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGKEIADFYSLKEAGCVAFT  196 (467)
T ss_dssp             CCHHHHHHHHHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSSSBCCHHHHHHHTCCCBC
T ss_pred             hhHHHHHHHHHhCCeEEEEecC-CCCCCCChHHHHHHHHHHhcccCcceEEEEeeecCCCCcccHHHHHHHHHcCCEEEE
Confidence            7888889999999999999998 444444455666666655554443455444433221 11223455666666765553


Q ss_pred             EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHH
Q 015826          195 SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLT  274 (399)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~  274 (399)
                      .    .   ..+..+.++++++++.|+++|+++.+|+++.......+ ..    +......+...++...|...+.+.+.
T Consensus       197 ~----~---~~~~~~~e~l~~~~~~A~~~g~~v~~H~~~~~~~~~~l-~~----g~~~~~~g~~~~~~~~e~~~~~~~~~  264 (467)
T 1xrt_A          197 D----D---GSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGVI-NE----GEVSALLGLSSRAPEAEEIQIARDGI  264 (467)
T ss_dssp             C----T---TSCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC-------------------------CHHHHHHHHHH
T ss_pred             c----C---CCCCCCHHHHHHHHHHHHhcCCEEEEECCCHHHHHHHH-hc----CccchhcccccCChHHHHHHHHHHHH
Confidence            1    1   12357899999999999999999999998765432111 11    11112223445666677777777777


Q ss_pred             HHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHH
Q 015826          275 VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLW  354 (399)
Q Consensus       275 ~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~  354 (399)
                      +++..       +.++|+.|+++. ++++++++++++|+.+++++||+|++++.+.+...++++++.||+|++++++.||
T Consensus       265 ~~~~~-------g~~~hi~H~~~~-~~~~~i~~~~~~G~~v~~~~~p~~~~~~~~~~~~~~~~~~~~pplr~~~~~~~l~  336 (467)
T 1xrt_A          265 LAQRT-------GGHVHIQHVSTK-LSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANARVNPPLRKKEDRLALI  336 (467)
T ss_dssp             HHHHH-------CCEEEESCCCSH-HHHHHHHHHHHTTCCEEEEECGGGGC----------------------CCHHHHH
T ss_pred             HHHHh-------CCCEEEEeCCCH-HHHHHHHHHHhcCCcEEEeccHHHHhcCHhHhhccCceEEEcCCCCCHHHHHHHH
Confidence            77765       889999999997 7899999999999999999999999998877655567889999999999999999


Q ss_pred             HHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhccc
Q 015826          355 EALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG  397 (399)
Q Consensus       355 ~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~  397 (399)
                      ++++.|.+++++|||.|++..+|.    .|..+|+|++|+|+.
T Consensus       337 ~~l~~Gv~~~lgTD~~~~~~~~~~----~~~~~~~g~~g~e~~  375 (467)
T 1xrt_A          337 EGVKRGIIDCFATDHAPHQTFEKE----LVEFAMPGIIGLQTA  375 (467)
T ss_dssp             HHHHHTCSCEECCCBCCCCC---------------CCCCGGGH
T ss_pred             HHHhCCceEEEeeCCCCCChhHhc----ccccCCCCCccHHHH
Confidence            999999999999999999877664    377889999999864

>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*

Probab=100.00  E-value=1.6e-34  Score=287.99  Aligned_cols=285  Identities=19%  Similarity=0.193  Sum_probs=211.8

Q ss_pred             CCccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCch
Q 015826           41 PYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF  118 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~  118 (399)
                      ++++++|+|++|+|+++  ..+++|+|+||||++|++....    ++.++||++|++|+|||||+|+|+....+...   
T Consensus         5 ~~~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~~----~~~~~id~~g~~v~PG~iD~H~H~~~~~~~~~---   77 (480)
T 3gip_A            5 EKLDFKITGGWIIDGTGAPRRRADLGVRDGRIAAIGELGAH----PARHAWDASGKIVAPGFIDVHGHDDLMFVEKP---   77 (480)
T ss_dssp             CCEEEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTTS----CEEEEEECTTSEEEECEEESSCCCTTHHHHST---
T ss_pred             ccCCEEEECcEEECCCCCeeeeeEEEEECCEEEEecCCCCC----CCCeEEECCCCEEccCEEeccccccccccCCh---
Confidence            55789999999999887  3689999999999999986422    35689999999999999999999865321111   


Q ss_pred             HHHHHHHHcCCeeeeecCcC--------CCCCCCCc---------HHHHHHHHHHHh-ccCceeEEeeeeee--------
Q 015826          119 PSGTKAAAAGGITTLIDMPL--------NSDPSTIS---------TETLKLKVDAAE-KRIYVDVGFWGGLV--------  172 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~--------~~~~~~~~---------~~~~~~~~~~~~-~~~~~~~~~~~~~~--------  172 (399)
                        ....++++||||++++.+        ++.+....         ++.+..+++... ....++++++.+..        
T Consensus        78 --~~~~~~~~G~Tt~~~g~cG~~~~p~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~r~~~~g  155 (480)
T 3gip_A           78 --DLRWKTSQGITTVVVGNCGVSAAPAPLPGNTAAALALLGETPLFADVPAYFAALDAQRPMINVAALVGHANLRLAAMR  155 (480)
T ss_dssp             --TCHHHHTTTEEEEEECCTTCCSCSCCCTTCCCGGGGGTCSSCCCSSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCS
T ss_pred             --hHHHHhcCCeeEEEecCCCcCCCCCCcccchhhhhhhhccCccccCHHHHHHHHHhCCCCceEEEccccHHHHHHhcC
Confidence              124568999999998422        22221111         133555555544 34567888876432        


Q ss_pred             ----CCChhhHHHHHHHH----HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhc
Q 015826          173 ----PENAYNASALEALL----NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLE  244 (399)
Q Consensus       173 ----~~~~~~~~~l~~l~----~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~  244 (399)
                          ..+.+.++++.+++    +.|+.+++.++.+..   ..+.+.+++.++++.++++|.++.+|+++...        
T Consensus       156 ~~~~~~~~~~l~~m~~l~~~~~~~Ga~g~~~~~~y~p---~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~--------  224 (480)
T 3gip_A          156 DPQAAPTAAEQQAMQDMLQAALEAGAVGFSTGLAYQP---GAVAQAAELEGLARVAAERRRLHTSHIRNEAD--------  224 (480)
T ss_dssp             STTSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSTT---GGGCCHHHHHHHHHHHHHTTCEEEEECSCSST--------
T ss_pred             CcCCCCCHHHHHHHHHHHHHHHHCCCcEEeecCccCC---cccCCHHHHHHHHHHHHHcCCEEEEEecCccc--------
Confidence                11234455665555    689999999876642   12458899999999999999999999987532        


Q ss_pred             cCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCC---------ChhHHHHHHHHHHHCCCCE
Q 015826          245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS---------DASSSLDLLMEAKTNGDSI  315 (399)
Q Consensus       245 ~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s---------~~~~~l~~i~~ak~~G~~v  315 (399)
                                         .+..++.+++.+++++       |+++|++|++         +. +++++|+++|++|++|
T Consensus       225 -------------------~~~~a~~e~i~la~~~-------g~~v~i~H~s~~~~~~~~~~~-~~l~~i~~a~~~G~~V  277 (480)
T 3gip_A          225 -------------------GVEAAVEEVLAIGRGT-------GCATVVSHHKCMMPQNWGRSR-ATLANIDRAREQGVEV  277 (480)
T ss_dssp             -------------------THHHHHHHHHHHHHHH-------CCEEEETTCCCCSGGGTTTHH-HHHHHHHHHHHTTCCE
T ss_pred             -------------------cHHHHHHHHHHHHHHh-------CCCEEEEEEeccCccchhhHH-HHHHHHHHHHHcCCce
Confidence                               1345788899999986       8999999998         36 8999999999999999


Q ss_pred             EEEccccccccccccCCCCCcceEEc-------CCCCC-----------hhhHHHHHHHHhc-----------------C
Q 015826          316 TVETCPHYLAFSAEEIPDGDTRFKCA-------PPIRD-----------AANKEKLWEALMD-----------------G  360 (399)
Q Consensus       316 t~e~~p~~L~~~~~~~~~~~~~~~~~-------Pplr~-----------~~~~~~l~~~l~~-----------------G  360 (399)
                      ++++||||+.++...+...+.+++++       ||++.           .++++++|+.+.+                 +
T Consensus       278 t~e~~p~~~~~t~~~l~~~~~~~~~~~~~~~~~p~~~g~~~~~ia~~~~~~~~~a~~~~l~~g~i~~~~~~~~~~~~~~~  357 (480)
T 3gip_A          278 ALDIYPYPGSSTILIPERAETIDDIRITWSTPHPECSGEYLADIAARWGCDKTTAARRLAPAGAIYFAMDEDEVKRIFQH  357 (480)
T ss_dssp             EEEECSCSCEEEECCGGGTTTSSCCEEEEESSCGGGTTCBHHHHHHHHTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHS
T ss_pred             EEEeeccccCcchhhhcCHHHHHHHhhccccCCCccCCCcHHHHHHHcCCCHHHHHHHhccCCeEEEeCCHHHHHHHHcC
Confidence            99999999999887776667788888       99954           5567778755543                 4


Q ss_pred             CccEEeCCCCCC
Q 015826          361 HIDMLSSDHSPT  372 (399)
Q Consensus       361 ~id~i~sdh~p~  372 (399)
                      ...+++||+.++
T Consensus       358 ~~~~~gsD~~~~  369 (480)
T 3gip_A          358 PCCMVGSDGLPN  369 (480)
T ss_dssp             TTEEECCCCCTT
T ss_pred             CCeEEecCCccc
Confidence            455677777655

>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A

Probab=99.97  E-value=4.1e-30  Score=257.31  Aligned_cols=283  Identities=18%  Similarity=0.196  Sum_probs=197.3

Q ss_pred             ccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCchHH
Q 015826           43 NQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGFPS  120 (399)
Q Consensus        43 ~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~~~  120 (399)
                      ++++|+|++|+++++  ..+++|+|+||||++|++... +   .+.++||++|++|+|||||+|+|+..++...     .
T Consensus        21 ~~~~i~~~~v~~~~~~~~~~~~v~i~~g~I~~i~~~~~-~---~~~~~iD~~g~~v~PG~iD~H~H~~~~~~~~-----~   91 (496)
T 1rk6_A           21 FDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSA-S---SARRRIDVAGKVVSPGFIDSHTHDDNYLLKH-----R   91 (496)
T ss_dssp             BSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTT-S---CBSCEEECTTCEEEECEEESSCCCTTHHHHC-----T
T ss_pred             ccEEEECCEEEeCCCCceeccEEEEECCEEEEecCCCC-C---CCCeEEeCCCCEEecCEeeeeecCCcccccc-----H
Confidence            478999999999876  367899999999999987532 1   2457999999999999999999997653211     1


Q ss_pred             HHHHHHcCCeeeeecCcCC--CCCCC--C--------------cHHHHHHHHHHHhc-cCceeEEeeeee----------
Q 015826          121 GTKAAAAGGITTLIDMPLN--SDPST--I--------------STETLKLKVDAAEK-RIYVDVGFWGGL----------  171 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~--~~~~~--~--------------~~~~~~~~~~~~~~-~~~~~~~~~~~~----------  171 (399)
                      ..+.++++||||+++|+++  ..|..  .              ....+..+.+.... ...+++.++.+.          
T Consensus        92 ~~~~~~~~G~Tt~~~~~~g~~~~p~~~~~l~~~i~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~g~~~~~~~~~~~  171 (496)
T 1rk6_A           92 DMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAAPPAVNAACMVGHSTLRAAVMPD  171 (496)
T ss_dssp             TCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHSCCSSEEEEEEEHHHHHHHHCSC
T ss_pred             HHHHHHcCCeEEEEeCCCCCCCCCCChHHHHHhhcccCcccccCccCHHHHHHHHhccCCccceEEecccccceeeeccc
Confidence            3577899999999998742  22221  0              02233334444332 334455443221          


Q ss_pred             eC--CChhhHHHHHHH----HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhcc
Q 015826          172 VP--ENAYNASALEAL----LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED  245 (399)
Q Consensus       172 ~~--~~~~~~~~l~~l----~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~  245 (399)
                      ..  ...+..++++++    .+.|+.+++....+..   ....+.+++.++++.++++|.++.+|+++...         
T Consensus       172 ~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~---~~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~---------  239 (496)
T 1rk6_A          172 LRREATADEIQAMQALADDALASGAIGISTGAFYPP---AAHASTEEIIEVCRPLITHGGVYATHMRDEGE---------  239 (496)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGG---GTTCCHHHHHHHHTHHHHHTCEEEEECSCSST---------
T ss_pred             cccCCCHHHHHHHHHHHHHHHHcCCcEEeeccccCC---CCCCCHHHHHHHHHHHHHcCCEEEEEeCCCcc---------
Confidence            00  112233444444    4689999887543321   12457889999999999999999999976432         


Q ss_pred             CcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcC---------CChhHHHHHHHHHHHCCCCEE
Q 015826          246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHL---------SDASSSLDLLMEAKTNGDSIT  316 (399)
Q Consensus       246 ~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~---------s~~~~~l~~i~~ak~~G~~vt  316 (399)
                                        ++..++.+.+++++++       |+++|++|+         ++. +.++++++++++| +++
T Consensus       240 ------------------~~~~~l~~~~~~a~~~-------g~~v~i~H~~~~~~~~~g~~~-~~~~~l~~a~~~g-~v~  292 (496)
T 1rk6_A          240 ------------------HIVQALEETFRIGREL-------DVPVVISHHKVMGKLNFGRSK-ETLALIEAAMASQ-DVS  292 (496)
T ss_dssp             ------------------THHHHHHHHHHHHHHH-------TSCEEECSCCCCSGGGTTTHH-HHHHHHHHHHHHS-CEE
T ss_pred             ------------------cHHHHHHHHHHHHHHc-------CCeEEEEEEeccCCcchhhHH-HHHHHHHHHHHcC-CeE
Confidence                              2345678888888876       899999999         444 6789999999999 999


Q ss_pred             EEccccccccccccCCC---C-CcceEEcCCC--------------CChhhHHHHHHHHhcCCc----------------
Q 015826          317 VETCPHYLAFSAEEIPD---G-DTRFKCAPPI--------------RDAANKEKLWEALMDGHI----------------  362 (399)
Q Consensus       317 ~e~~p~~L~~~~~~~~~---~-~~~~~~~Ppl--------------r~~~~~~~l~~~l~~G~i----------------  362 (399)
                      ++++|+++..+...+..   . +.....+||.              |....+++||+.+++|.|                
T Consensus       293 ~~~~~~~~~~~~~~~~~l~~~~~~~v~~~p~~~~l~~~~l~~~~~~~g~~~~~~l~~~l~~G~i~~~~~~~~v~~~~~~~  372 (496)
T 1rk6_A          293 LDAYPYVAGSTMLKQDRVLLAGRTLITWCKPYPELSGRDLEEIAAERGKSKYDVVPELQPAGAIYFMMDEPDVQRILAFG  372 (496)
T ss_dssp             EEECSCSCEEEECCCCTTTTSSCEEEEEESSCGGGTTCBHHHHHHHTTSCHHHHHHHHCSEEEEECCCCHHHHHHHHHST
T ss_pred             EEEeccCCCCCcccHHHhcCccceEEeccCCCcccccCcHHHHHHHcCCCHHHHHHHHHhcCceeecCCHHHHHHHHcCC
Confidence            99999877665433322   2 2344444543              666789999999999996                


Q ss_pred             -cEEeCCCCCCC
Q 015826          363 -DMLSSDHSPTV  373 (399)
Q Consensus       363 -d~i~sdh~p~~  373 (399)
                       .++|||+.|++
T Consensus       373 ~~~iGTD~~~~~  384 (496)
T 1rk6_A          373 PTMIGSDGLPHD  384 (496)
T ss_dssp             TEEECCCCCTTC
T ss_pred             CEEEecCCCCCC
Confidence             49999999875

>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*

Probab=99.96  E-value=2.4e-28  Score=246.37  Aligned_cols=272  Identities=22%  Similarity=0.262  Sum_probs=185.1

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCC-------C--CCCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP-------R--NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~-------~--~~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      .++++|+|++|+|+.+..+++|+|+||||++|++.....       .  ..++.++||++|++|+|||||+|+|+..++ 
T Consensus        65 ~~dllI~n~~Vid~~gi~~~dI~I~dGrI~~IG~~~~~~~~~~~~~~~~~~~~~evIDa~G~iV~PGlID~HvHl~~p~-  143 (569)
T 1e9y_B           65 ELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGGIDTHIHFISPQ-  143 (569)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECEEEEEEETTCTT-
T ss_pred             cCCEEEEeeEEECCCCcEeeeEEEECCEEEEeecCCCccccccccccccCCCCCeEEECCCCEEecCEEEEeecCCCcH-
Confidence            468999999999977666899999999999999753210       0  013568999999999999999999998653 


Q ss_pred             CCcCchHHHHHHHHcCCeeeeecCcCCC----CCCCC--cHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHH
Q 015826          113 TEWEGFPSGTKAAAAGGITTLIDMPLNS----DPSTI--STETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL  186 (399)
Q Consensus       113 ~~~e~~~~~~~~al~~GvTtv~d~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  186 (399)
                              ..++++++||||+++|+.+.    .+...  ....++..++.... ..+++.+++...   ....+++++++
T Consensus       144 --------~~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~a~~~-~~~~~~~~g~g~---~~~~~~l~e~~  211 (569)
T 1e9y_B          144 --------QIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEE-YSMNLGFLAKGN---ASNDASLADQI  211 (569)
T ss_dssp             --------HHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTT-SSSEEEEEEECC---CSCHHHHHHHH
T ss_pred             --------HHHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHHHhcc-cCceEEEECCCC---cCCHHHHHHHH
Confidence                    26789999999999985211    11111  14455555555543 346776654321   12356788888


Q ss_pred             HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHH
Q 015826          187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEE  266 (399)
Q Consensus       187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~  266 (399)
                      +.|+.++|.+..+       .+++++++++++.|+++|+++.+|+++...           .+.                
T Consensus       212 ~~Ga~gik~~~~~-------~~t~e~l~~~l~~A~~~g~~V~iHa~~~~e-----------~g~----------------  257 (569)
T 1e9y_B          212 EAGAIGFKIHEDW-------GTTPSAINHALDVADKYDVQVAIHTDTLNE-----------AGC----------------  257 (569)
T ss_dssp             HTTCSEEEECGGG-------CCCHHHHHHHHHHHHHTTCEEEECCCTTCS-----------SCC----------------
T ss_pred             HcCCCEEEecCCC-------CCCHHHHHHHHHHHHHhCCEEEEEcCCccc-----------chH----------------
Confidence            8999999986532       368899999999999999999999975221           000                


Q ss_pred             HHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHH---HHHHHHHHHCCCCEEEEccccccccccccCCC-CCc---ceE
Q 015826          267 AAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS---LDLLMEAKTNGDSITVETCPHYLAFSAEEIPD-GDT---RFK  339 (399)
Q Consensus       267 ~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~---l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~-~~~---~~~  339 (399)
                        +...  +++..       |.++|+.|++.. ..   .+.|+.++++|+  .+.++++++.++.+.+.. .+.   ...
T Consensus       258 --~~~~--la~~~-------g~~~hi~H~~~~-~~~~~~d~I~~~~~~gv--~~~~~~ptl~~t~~~~~~~~d~~~v~h~  323 (569)
T 1e9y_B          258 --VEDT--MAAIA-------GRTMHTFHTEGA-GGGHAPDIIKVAGEHNI--LPASTNPTIPFTVNTEAEHMDMLMVCHH  323 (569)
T ss_dssp             --HHHH--HHHHT-------TCCEEETTTTST-TSCSTTTGGGGGGSTTE--EEEECGGGCSCBTTHHHHHHHHHHHTTT
T ss_pred             --HHHH--HHHHc-------CCCEEEEEcccC-cccccHHHHHHHHHcCC--eeEeeCCccccccchhhhhhchhhhhhh
Confidence              0111  22222       778999999875 43   678888888775  344455556554332100 000   012


Q ss_pred             EcCCC---------CChhhHHHHHHHHh-cCCccEEeCCCCCCCc
Q 015826          340 CAPPI---------RDAANKEKLWEALM-DGHIDMLSSDHSPTVP  374 (399)
Q Consensus       340 ~~Ppl---------r~~~~~~~l~~~l~-~G~id~i~sdh~p~~~  374 (399)
                      ++|++         |...++.++|+.+. .|.+++++|||.|++.
T Consensus       324 l~~~~~ed~~~~~~rlr~~~~a~~~~L~d~Gv~v~iGSD~~~~~~  368 (569)
T 1e9y_B          324 KDKSIKEDVQFADSRIRPQTIAAEDTLHDMGAFSITSSDSQAMGR  368 (569)
T ss_dssp             CCSSCHHHHHHHHHHCCHHHHHHHHHHHHTTSCCEECCCTTSSCC
T ss_pred             cCcccHHHHHHhhcchhhhHHHHHHHHHhCCCEEEEeCCCCccCc
Confidence            24443         12356889999998 4999999999999863

>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*

Probab=99.92  E-value=2.1e-24  Score=210.33  Aligned_cols=268  Identities=14%  Similarity=0.129  Sum_probs=163.3

Q ss_pred             CccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCch-
Q 015826           42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF-  118 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~-  118 (399)
                      +++++|+|++|+++++  ...++|+|+||||++|++. . +   ++.++||++|++|+|||||+|+|+...+...++++ 
T Consensus         5 ~~~~~i~n~~v~~~~~~~~~~~~v~I~~g~I~~ig~~-~-~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~~~   79 (408)
T 3be7_A            5 SEDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKI-N-T---KDATVISIPDLILIPGLMDSHVHIVGNDSKGEESIA   79 (408)
T ss_dssp             CCCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECC-C-C---SSSEEEEEEEEEEEECEEEEEECCSSCCCCSGGGTT
T ss_pred             cceEEEEeeEEEeCCCCceeeeEEEEECCEEEEEeCC-C-C---CCCeEEECCCCEECcCceeeeEcccCCCCcchhhhc
Confidence            4589999999999876  3459999999999999975 2 1   25679999999999999999999982222222111 


Q ss_pred             ----------HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeee----------eee------
Q 015826          119 ----------PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG----------GLV------  172 (399)
Q Consensus       119 ----------~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~------  172 (399)
                                ...++.++++||||+++++ +..+   ....++...+...... ..+...+          ...      
T Consensus        80 ~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~---~~~~~~~~~~~~~~~~-~r~~~~~~~~~~~g~~~~~~~~~~~~  154 (408)
T 3be7_A           80 DSSHMGTVWGVVNAEKTLMAGFTTVRNVG-AANY---ADVSVRDAIERGVING-PTMLVSGPALGITGGHCDHNLLPPEF  154 (408)
T ss_dssp             CCTHHHHHHHHHHHHHHHTTTEEEEEECC-CSTT---HHHHHHHHHHTTSSCC-CEEEECCSCBBCTTSTTSCCCSCTTT
T ss_pred             CCHHHHHHHHHHHHHHHHHcCCCEEEeCC-Cccc---cCHHHHHHHHCCCCCC-CEEEEccceeeccCCCCccccccccc
Confidence                      1256788999999999997 3222   1123333222211000 0111100          000      


Q ss_pred             -------CCC-hhhHHHHHHHHHcCCcEEEEeecCC-----CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchh
Q 015826          173 -------PEN-AYNASALEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSER  239 (399)
Q Consensus       173 -------~~~-~~~~~~l~~l~~~G~~~ik~~~~~~-----~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~  239 (399)
                             ... .+..+.+++..+.|+..+|.+....     ...+.+.++.++++++++.|+++|+++.+|+.+..    
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~----  230 (408)
T 3be7_A          155 NYSSEGVVDSPWEARKMVRKNRKYGADLIKFCATGGVMSRNTDVNAKQFTLEEMKAIVDEAHNHGMKVAAHAHGLI----  230 (408)
T ss_dssp             CCCCTTBCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCEEEEEECSHH----
T ss_pred             cccCCcccCCHHHHHHHHHHHHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEeCCHH----
Confidence                   001 1122334455567888999875331     00113467899999999999999999999997532    


Q ss_pred             HHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEc
Q 015826          240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET  319 (399)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~  319 (399)
                                                  ++..+++.           |.. .|.|....  .-+.++.+++.|+.++++.
T Consensus       231 ----------------------------~i~~~~~~-----------g~~-~i~H~~~~--~~~~i~~~~~~g~~v~~~~  268 (408)
T 3be7_A          231 ----------------------------GIKAAIKA-----------GVD-SVEHASFI--DDETIDMAIKNNTVLSMDI  268 (408)
T ss_dssp             ----------------------------HHHHHHHH-----------TCS-EEEECTTC--CHHHHHHHHHTTCEEECCC
T ss_pred             ----------------------------HHHHHHHc-----------CCC-EEEECCCC--CHHHHHHHHHCCCEEeeee
Confidence                                        12222222           322 47777653  3467777788887664332


Q ss_pred             cccccccccccCCCCCcceEEcCCCCCh------hhHHHHHHHHhcCCccEEeCCCCC
Q 015826          320 CPHYLAFSAEEIPDGDTRFKCAPPIRDA------ANKEKLWEALMDGHIDMLSSDHSP  371 (399)
Q Consensus       320 ~p~~L~~~~~~~~~~~~~~~~~Pplr~~------~~~~~l~~~l~~G~id~i~sdh~p  371 (399)
                      .+.+.      +...+...++.|+++..      ..+..+++.++.|...+++||+.+
T Consensus       269 ~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gTD~~~  320 (408)
T 3be7_A          269 FVSDY------ILGEGAKAGIREESLNKERLVGKKQRENFMNAHRRGAIITFGTDAGI  320 (408)
T ss_dssp             STHHH------HHTTTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTCCEECCCCBTT
T ss_pred             cHHHH------hhhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCC
Confidence            22110      00111112334444332      235678999999999999999964

>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A

Probab=99.92  E-value=4.8e-24  Score=209.33  Aligned_cols=270  Identities=17%  Similarity=0.221  Sum_probs=163.9

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC--------
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT--------  113 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~--------  113 (399)
                      +++++|+|++|++++  .+++|+|+||||++||+..+.+  .++.++||++|++|+|||||+|+|+......        
T Consensus         7 ~~~~li~n~~v~~~~--~~~~v~I~~g~I~~vg~~~~~~--~~~~~viD~~G~~v~PGlID~H~Hl~~~~~~~~~~~~~~   82 (430)
T 1ra0_A            7 NALQTIINARLPGEE--GLWQIHLQDGKISAIDAQSGVM--PITENSLDAEQGLVIPPFVEPHIHLDTTQTAGQPNWNQS   82 (430)
T ss_dssp             -CCCEEEEEBCTTCC--SEEEEEEETTEEEEEEEESSCC--CCCTTEEECTTCEEESCEEEEEECTTTTTCTTSSSCCSS
T ss_pred             CCcEEEEeeEecCCC--ceeEEEEECCEEEEeecCCCCC--CCCcceEccCCCEecccccccccchhhhhhcCCCcCCCC
Confidence            457899999999876  6789999999999999754321  1356799999999999999999999754211        


Q ss_pred             -----------------CcCchHHH----HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc-cCceeEEeeeee
Q 015826          114 -----------------EWEGFPSG----TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-RIYVDVGFWGGL  171 (399)
Q Consensus       114 -----------------~~e~~~~~----~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  171 (399)
                                       +.++++..    ...++++||||+++++....+.   ...++...+.... +..+++..+. +
T Consensus        83 ~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~  158 (430)
T 1ra0_A           83 GTLFEGIERWAERKALLTHDDVKQRAWQTLKWQIANGIQHVRTHVDVSDAT---LTALKAMLEVKQEVAPWIDLQIVA-F  158 (430)
T ss_dssp             CCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTEEEEEEEEECCSTT---CHHHHHHHHHHHHHTTTCEEEEEE-E
T ss_pred             CCHHHHHHHhHHhhhhcCHHHHHHHHHHHHHHHHhcCccEEeeccccCChH---HHHHHHHHHHHHhhhhhEEEEEEe-c
Confidence                             11233332    3456799999999987211232   1222322222111 2334443321 1


Q ss_pred             eC----CChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCC---CCHHHHHHHHHHHHhcCCCEEEecCChh-hchhHHhh
Q 015826          172 VP----ENAYNASALEALLNAGVLGLKSFMCPSGINDFPM---TNASHIKEGLSVLARYKRPLLVHAEMEK-GSERHVKL  243 (399)
Q Consensus       172 ~~----~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~---~~~~~l~~~~~~a~~~g~~v~~H~~~~~-~~~~~~~~  243 (399)
                      ..    ...+..+.++++.+.|...+.. . +.    .++   +++++++++++.|+++|+++.+|+.+.. ....    
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~-~~----~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~----  228 (430)
T 1ra0_A          159 PQEGILSYPNGEALLEEALRLGADVVGA-I-PH----FEFTREYGVESLHKTFALAQKYDRLIDVHCDEIDDEQSR----  228 (430)
T ss_dssp             CTTCSSSSTTHHHHHHHHHHTTCSEECC-C-GG----GSSSHHHHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCC----
T ss_pred             CCcccccCchHHHHHHHHHHhCCCeEee-e-ec----ccccccccHHHHHHHHHHHHHcCCCEEEEECCCCchhHH----
Confidence            11    1223345577777777543322 1 11    122   6889999999999999999999995432 1100    


Q ss_pred             ccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChh-----HHHHHHHHHHHCCCCEEEE
Q 015826          244 EDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDAS-----SSLDLLMEAKTNGDSITVE  318 (399)
Q Consensus       244 ~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~-----~~l~~i~~ak~~G~~vt~e  318 (399)
                                              .+.+.++.+.+.+     .+.++++.|.+...     +..+.++.++++|+  ++.
T Consensus       229 ------------------------~~~~~~~~~~~~g-----~~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~gv--~v~  277 (430)
T 1ra0_A          229 ------------------------FVETVAALAHHEG-----MGARVTASHTTAMHSYNGAYTSRLFRLLKMSGI--NFV  277 (430)
T ss_dssp             ------------------------HHHHHHHHHHHHT-----CGGGEEEEECGGGGGSCHHHHHHHHHHHHHHTC--EEE
T ss_pred             ------------------------HHHHHHHHHHHhC-----CCCCEEEEeccccccCChHhHHHHHHHHHHcCC--EEE
Confidence                                    1112223333321     14567778876430     12357777777775  556


Q ss_pred             ccccc-cccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCC
Q 015826          319 TCPHY-LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP  371 (399)
Q Consensus       319 ~~p~~-L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p  371 (399)
                      +||++ +.+...    .+    ..||++....   +++.++.|.+++++|||.+
T Consensus       278 ~~p~~~~~~~~~----~~----~~p~~~~~~~---~~~~~~~Gv~~~lgTD~~~  320 (430)
T 1ra0_A          278 ANPLVNIHLQGR----FD----TYPKRRGITR---VKEMLESGINVCFGHDGVF  320 (430)
T ss_dssp             ECHHHHHHHTTT----TC----CSSCCCCCCC---HHHHHHTTCCEEECCBCSS
T ss_pred             ECchhhhhhccc----cC----CCCCcCCCCC---HHHHHHCCCEEEEeCCCCc
Confidence            78863 222211    11    2577666544   5677788999999999973

>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*

Probab=99.92  E-value=4.3e-24  Score=209.47  Aligned_cols=272  Identities=17%  Similarity=0.064  Sum_probs=170.7

Q ss_pred             CccEEEEccEEEcCCCc---eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC----
Q 015826           42 YNQYWLTSKRIVTPKGV---ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE----  114 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~---~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~----  114 (399)
                      |++++|+|++|+++++.   .+++|+|+||||++|++....+   ++.++||++|++|+|||||+|+|+.......    
T Consensus         3 m~~~~i~n~~i~~~~~~~~~~~~~i~i~~g~I~~i~~~~~~~---~~~~~iD~~g~~v~PGliD~H~H~~~~~~~~~~~~   79 (426)
T 2r8c_A            3 LTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKS---SNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRVA   79 (426)
T ss_dssp             -CEEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHH
T ss_pred             cccEEEEeeEEEeCCCCcccCCceEEEECCEEEEEcCCCCCC---CCCeEEECCCCEEcCCeEeeeeccccccCCchhhc
Confidence            56899999999998642   4789999999999999853222   4678999999999999999999998765421    


Q ss_pred             ---cCc----hHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc-CceeEE-e------------------
Q 015826          115 ---WEG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVG-F------------------  167 (399)
Q Consensus       115 ---~e~----~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~------------------  167 (399)
                         .+.    .....+.++++||||++|++. .     . ..++..++..... ..+... .                  
T Consensus        80 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~-~-----~-~~l~~~i~~~~~~gpri~~~g~~i~~~~g~~~~~~~~~~~  152 (426)
T 2r8c_A           80 TLPNVLVTLRAVPIMRAMLRRGFTTVRDAGG-A-----G-YPFKQAVESGLVEGPRLFVSGRALSQTGGHADPRARSDYM  152 (426)
T ss_dssp             HSCHHHHHHHHHHHHHHHHHTTEEEEEECSS-C-----C-HHHHHHHHTTSSCCCEEEECCSEEECTTSTTCCCCCSSBC
T ss_pred             cCCHHHHHHHHHHHHHHHHhCCeEEEEeCCC-c-----h-HHHHHHHHcCCCCCCeEEecCCcccCCCCCcccccccccc
Confidence               111    113356679999999999972 1     1 1333333332111 111000 0                  


Q ss_pred             --------------eeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCC-----CCCCCCCCHHHHHHHHHHHHhcCCCEE
Q 015826          168 --------------WGGLVPENAYNASALEALLNAGVLGLKSFMCPSG-----INDFPMTNASHIKEGLSVLARYKRPLL  228 (399)
Q Consensus       168 --------------~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~  228 (399)
                                    +........+..+.++++++.|+..+|++.....     ....+.+++++++++++.|+++|+++.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~  232 (426)
T 2r8c_A          153 PPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVL  232 (426)
T ss_dssp             CCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEE
T ss_pred             cccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEE
Confidence                          0111122234566778888899999999865311     012236799999999999999999999


Q ss_pred             EecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHH
Q 015826          229 VHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEA  308 (399)
Q Consensus       229 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~a  308 (399)
                      +|+.+..                                ++.++++.           |.. .+.|....  +-+.++..
T Consensus       233 ~H~~~~~--------------------------------~i~~al~~-----------G~~-~i~H~~~~--~~~~~~~~  266 (426)
T 2r8c_A          233 AHAYTPA--------------------------------AIARAVRC-----------GVR-TIEHGNLI--DDETARLV  266 (426)
T ss_dssp             EEECSHH--------------------------------HHHHHHHT-----------TCS-EEEECTTC--CHHHHHHH
T ss_pred             EEeCChH--------------------------------HHHHHHHc-----------CCC-EEecCCcC--CHHHHHHH
Confidence            9997532                                23333332           222 47787653  34567777


Q ss_pred             HHCCCCEEEEccccccccccccCCCCCcceEEcCCCCC--hhhHHHHHHHHhcCCccEEeCCCCC
Q 015826          309 KTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD--AANKEKLWEALMDGHIDMLSSDHSP  371 (399)
Q Consensus       309 k~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~--~~~~~~l~~~l~~G~id~i~sdh~p  371 (399)
                      ++.|+.++..+.++...+.........+..  +..++.  ......+.+.++.|...+++||+.+
T Consensus       267 ~~~gv~~~pt~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~  329 (426)
T 2r8c_A          267 AEHGAYVVPTLVTYDALASEGEKYGLPPES--IAKIADVHGAGLHSIEIMKRAGVKMGFGTDLLG  329 (426)
T ss_dssp             HHTTCEEECCTHHHHHHHHHTTTTTCCHHH--HTTSTTTGGGHHHHHHHHHHTTCEECCCCCCCG
T ss_pred             HHcCCeEeechHHHHHHhhhccccCCCHHH--HHHHHHHHHHHHHHHHHHHHcCCeEEEecCCCC
Confidence            888887766654544333221110000000  001111  1345667888899999999999853

>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14

Probab=99.91  E-value=9.5e-25  Score=210.49  Aligned_cols=256  Identities=17%  Similarity=0.200  Sum_probs=162.9

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCC-CEEecceeecccccCCCCCCCcCchHH
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGE-AVIMPGLIDVHAHLDDPGRTEWEGFPS  120 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G-~~vlPGlID~H~H~~~~~~~~~e~~~~  120 (399)
                      +++++|+|++|++++   +++|+|+||||++|++....    ++.++||++| ++|+|||||+|+|+..++...++   .
T Consensus         4 ~~~~~i~~~~v~~~~---~~~v~i~~g~I~~ig~~~~~----~~~~~iD~~g~~~v~PG~ID~H~H~~~~~~~~~~---~   73 (379)
T 2ics_A            4 DYDLLIKNGQTVNGM---PVEIAIKEKKIAAVAATISG----SAKETIHLEPGTYVSAGWIDDHVHCFEKMALYYD---Y   73 (379)
T ss_dssp             CEEEEEEEEECTTSC---EEEEEEETTEEEEEESCCCC----CEEEEEECCTTCEEEECEEEEEECCCTTSSSSCC---C
T ss_pred             cccEEEECCEEEcCC---cceEEEECCEEEEecCCCCC----CCCcEEeCCCCEEEccCEEEeccccCccCccccC---c
Confidence            468999999999864   78999999999999875321    2457999999 99999999999999887644443   3


Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc--cCceeEEeeeeeeCC-C-----hhhHHHHHHHHH---cC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK--RIYVDVGFWGGLVPE-N-----AYNASALEALLN---AG  189 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~-----~~~~~~l~~l~~---~G  189 (399)
                      ..+.++++||||+++++ +..+  .+.+.+.+..+....  ..++++...+ ..+. .     ....++++++++   .|
T Consensus        74 ~~~~~~~~GvTtv~d~~-~~~~--~~~~~~~~~~~~~~~~i~~~~~~~~~G-~~~~~~~~~~~~~~~~~~~~~~~~~~~~  149 (379)
T 2ics_A           74 PDEIGVKKGVTTVIDAG-TTGA--ENIHEFYDLAQQAKTNVFGLVNISKWG-IVAQDELADLSKVQASLVKKAIQELPDF  149 (379)
T ss_dssp             HHHHTGGGTEEEEEEES-SSCT--TTHHHHHHHHHTSSSEEEEEEESSTTT-TSSSCTTSSGGGCCHHHHHHHHHHCTTT
T ss_pred             hhhhHhhCceeEEEcCC-CCCc--cCHHHHHHHHHhhcccEEEEccccccC-CCCHHHHHHHHHHHHHHHHHHHHhhhCc
Confidence            45778999999999987 3212  234444443333221  1112221111 1111 1     112456666665   47


Q ss_pred             CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHh-cCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHH
Q 015826          190 VLGLKSFMCPSGINDFPMTNASHIKEGLSVLAR-YKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA  268 (399)
Q Consensus       190 ~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~-~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~  268 (399)
                      +.++|.++.+..   ...++.+.++++++.|++ +|+++.+|+++.......+                           
T Consensus       150 ~~~i~~~~~~~~---~~~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~~~---------------------------  199 (379)
T 2ics_A          150 VVGIKARMSRTV---IGDNGITPLELAKQIQQENQEIPLMVHIGSAPPHLDEI---------------------------  199 (379)
T ss_dssp             EEEEEEEESHHH---HTTCTTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHH---------------------------
T ss_pred             ceEEEEeccccc---cccchHHHHHHHHHHHHHhcCCeEEEeCCCCcchHHHH---------------------------
Confidence            788888765321   123577889999999999 9999999996522110000                           


Q ss_pred             HHHHHHHHhh--hccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCC
Q 015826          269 IRELLTVAKD--TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRD  346 (399)
Q Consensus       269 v~~~~~~a~~--~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~  346 (399)
                          ....+.  .-..+ ..+.+.|+.|.|+. ...+.++.+++.|  ++++++|++..+                    
T Consensus       200 ----~~~~~~g~~~~H~-~~~~~~~~~~~s~~-~~~~~~~~~~~~g--~~~~~~p~~~~~--------------------  251 (379)
T 2ics_A          200 ----LALMEKGDVLTHC-FNGKENGILDQATD-KIKDFAWQAYNKG--VVFDIGHGTDSF--------------------  251 (379)
T ss_dssp             ----HHHCCTTCEEEST-TCCSTTSSEETTTT-EECHHHHHHHHTT--CEEECCCTTTSC--------------------
T ss_pred             ----HHHhhcCCeeeec-cCCCccchhhccCH-HHHHHHHHHHHcC--CEEEecCCCCCc--------------------
Confidence                000000  00000 12334566676555 5667888887777  466777752110                    


Q ss_pred             hhhHHHHHHHHhcC-CccEEeCCCCC
Q 015826          347 AANKEKLWEALMDG-HIDMLSSDHSP  371 (399)
Q Consensus       347 ~~~~~~l~~~l~~G-~id~i~sdh~p  371 (399)
                        +.+.++++++.| .+++++||+.+
T Consensus       252 --~~~~~~~~~~~G~~~~~l~TD~~~  275 (379)
T 2ics_A          252 --NFHVAETALREGMKAASISTDIYI  275 (379)
T ss_dssp             --CHHHHHHHHHTTCCCSBCCCCBCH
T ss_pred             --CHHHHHHHHHcCCCcceEeccCcc
Confidence              345688999999 99999999863

>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*

Probab=99.91  E-value=3.8e-24  Score=209.35  Aligned_cols=266  Identities=14%  Similarity=0.034  Sum_probs=164.7

Q ss_pred             CccEEEEccEEEcCCCc---eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC----
Q 015826           42 YNQYWLTSKRIVTPKGV---ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE----  114 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~---~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~----  114 (399)
                      |++++|+|++|+|+++.   .+++|+|+||||++|++....+   ++.++||++|++|+|||||+|+|+.......    
T Consensus         3 ~~~~~i~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~---~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~   79 (423)
T 3feq_A            3 LTITVLQGGNVLDLERGVLLEHHHVVIDGERIVEVTDRPVDL---PNAQAIDVRGKTVMPGFIDCHVHVLASNANLGVNA   79 (423)
T ss_dssp             -CEEEEEEEEEEETTTTEEEEEEEEEEETTEEEEEECSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHHH
T ss_pred             ceEEEEEccEEEeCCCCcccCCceEEEECCEEEEecCCCCCC---CCCeEEeCCCCEECCCeeeeEeeecccCCChhhhh
Confidence            56899999999998753   3689999999999999853322   4678999999999999999999998765411    


Q ss_pred             -cC------chHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEe--------------------
Q 015826          115 -WE------GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF--------------------  167 (399)
Q Consensus       115 -~e------~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------  167 (399)
                       ..      ......+.++++||||++|++. .     . ..++..++.....+ ..+..                    
T Consensus        80 ~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~-~-----~-~~l~~~~~~~~~~g-~r~~~~g~~~~~~~g~~~~~~~~~~  151 (423)
T 3feq_A           80 TQPNILAAIRSLPILDAMLSRGFTSVRDAGG-A-----D-WSLMQAVETGLVSG-PRIFPSGKALSQTGGHGDFRPRGDL  151 (423)
T ss_dssp             HSCHHHHHHTHHHHHHHHHHTTEEEEEECSS-C-----C-HHHHHHHHTTSSCS-CEEECCCSEEECTTSTTCCCCC---
T ss_pred             cCCHHHHHHHHHHHHHHHHhCCeEEEEeCCC-c-----h-HHHHHHHHcCCCCC-CeEEecCcccccCCCCccccccccc
Confidence             11      1123456779999999999972 1     1 13333333321110 01100                    


Q ss_pred             ------------eeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCC-----CCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015826          168 ------------WGGLVPENAYNASALEALLNAGVLGLKSFMCPSG-----INDFPMTNASHIKEGLSVLARYKRPLLVH  230 (399)
Q Consensus       168 ------------~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H  230 (399)
                                  +........+..+.++++++.|+..+|++.....     ......+++++++++++.|+++|+++.+|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H  231 (423)
T 3feq_A          152 LEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAH  231 (423)
T ss_dssp             CCCCCSSCCTTCSEEECCSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred             cccccccccccccceecCCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEE
Confidence                        0011122234456778888899999999865310     01223679999999999999999999999


Q ss_pred             cCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHH
Q 015826          231 AEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKT  310 (399)
Q Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~  310 (399)
                      +.+..                                ++..+++...           . .+.|....  +-+.++..++
T Consensus       232 ~~~~~--------------------------------~i~~~l~~g~-----------~-~i~H~~~~--~~~~~~~l~~  265 (423)
T 3feq_A          232 AYTGR--------------------------------AIARAVRCGV-----------R-TIEHGNLV--DEAAAKLMHE  265 (423)
T ss_dssp             EEEHH--------------------------------HHHHHHHHTC-----------C-EEEEEEEC--CHHHHHHHHH
T ss_pred             eCChH--------------------------------HHHHHHHcCC-----------C-EEeccCcC--CHHHHHHHHH
Confidence            96432                                2344444322           1 34444321  1234555566


Q ss_pred             CCCCEEEEccccccccccccCCCCCcceEEcCCCCCh------hhHHHHHHHHhcCCccEEeCCCC
Q 015826          311 NGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA------ANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       311 ~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~------~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                      .|+.++..+..+...+....      ...++|..+..      .....+.+.++.|...+++||+.
T Consensus       266 ~gv~~~pt~~~~~~~~~~~~------~~~~~p~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~gTD~~  325 (423)
T 3feq_A          266 HGAFVVPTLVTYDALAKHGA------EFGMPPESVAKVASVQQKGRESLEIYANAGVKMGFGSDLL  325 (423)
T ss_dssp             HTCEEECCTHHHHHHHHHTG------GGTCCTTTSSTHHHHHHHHHHHHHHHHHHTCCBCCCCCCC
T ss_pred             CCCccccchHHHHHHHhccc------ccCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCC
Confidence            67766554434333222111      11122322211      13455777888999999999985

>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}

Probab=99.91  E-value=5.1e-23  Score=199.02  Aligned_cols=255  Identities=15%  Similarity=0.136  Sum_probs=160.9

Q ss_pred             CccEEEEccEE-EcCCC----ceeeEEEEECCEEEEeccCCCCCCCCCC-CcEEeCCCCEEecceeecccccCCCCCCCc
Q 015826           42 YNQYWLTSKRI-VTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKT-GQVVDYGEAVIMPGLIDVHAHLDDPGRTEW  115 (399)
Q Consensus        42 ~~~~li~n~~v-v~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~-~~vID~~G~~vlPGlID~H~H~~~~~~~~~  115 (399)
                      |++++|+|++| +++++    ..+++|+|+||||++|++.....  .++ .++||++|++|+|||||+|+|+..+.+...
T Consensus         1 m~~~li~n~~v~~~~~~~~~~~~~~~v~I~~g~I~~Ig~~~~~~--~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~   78 (386)
T 2vun_A            1 MSKTIIKNIGKIVSGDIKSPVLQADTIVVEDGLIAAIGGEELMK--DAGDATIIDAAGSTVTPGLLDTHVHVSGGDYAPR   78 (386)
T ss_dssp             -CEEEEESCSEEECSCTTSCEECCSEEEEETTEEEEEESGGGGT--TCTTCEEEECTTCEEEECEEEEEECCCSTTEEGG
T ss_pred             CccEEEeccEEEEcCCCCccccccceEEEECCEEEEecCccccC--CCCCceEEcCCCCEEccceeeccccccCCCcChh
Confidence            46899999999 99875    24689999999999998732211  123 579999999999999999999975432110


Q ss_pred             CchHHHHHHHHcCCeeeeecCcC---CCCCCCCcHHHHH--HHHHHHh--cc--CceeEEeeee--eeCCChhhHHHHHH
Q 015826          116 EGFPSGTKAAAAGGITTLIDMPL---NSDPSTISTETLK--LKVDAAE--KR--IYVDVGFWGG--LVPENAYNASALEA  184 (399)
Q Consensus       116 e~~~~~~~~al~~GvTtv~d~~~---~~~~~~~~~~~~~--~~~~~~~--~~--~~~~~~~~~~--~~~~~~~~~~~l~~  184 (399)
                      ......++.++++||||+++++.   ...+  ...+.++  ..++...  ..  ....+. .+.  +...  ...+++++
T Consensus        79 ~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~--~~~~~~~~  153 (386)
T 2vun_A           79 QKTMDFISSALHGGVTTMISAGSPHFPGRP--KDAAGTKALAITLSKSYYNARPAGVKVH-GGAVILEKG--LTEEDFIE  153 (386)
T ss_dssp             GTEESHHHHHHTTTEEEEEECCCTTSTTCC--CSHHHHHHHHHHHHHHHHHCCGGGCEEE-CCEECCCTT--CCHHHHHH
T ss_pred             HHHHHHHHHHHhCCceEEEeccccccCCCh--hhHHHHHHHHHHhhcccccccccceeec-cCcccccCC--cCHHHHHH
Confidence            01123678999999999999871   1222  2232333  2222111  00  101111 110  1111  12477888


Q ss_pred             HHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHH
Q 015826          185 LLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW  264 (399)
Q Consensus       185 l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  264 (399)
                      +++.|+..+|.+...      ..++++.++++++.|+++|+++.+|+++.....         .+.              
T Consensus       154 ~~~~g~~~ik~~~~~------~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---------~~~--------------  204 (386)
T 2vun_A          154 MKKEGVWIVGEVGLG------TIKNPEDAAPMVEWAHKHGFKVQMHTGGTSIPG---------SST--------------  204 (386)
T ss_dssp             HHHTTCCEEEEETSS------SCCSHHHHHHHHHHHHHTTCEEEEECSCCSCST---------TCS--------------
T ss_pred             HHHhCCCeEEEeecC------CCCCHHHHHHHHHHHHHCCCeEEEecCCccccc---------cCH--------------
Confidence            888999999986422      136889999999999999999999997543210         000              


Q ss_pred             HHHHHHHHHHHHhhhccCCCCCCceEEEEcCCC---hhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEc
Q 015826          265 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD---ASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCA  341 (399)
Q Consensus       265 E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~---~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~  341 (399)
                        ..+..+.    +.       |.+ .+.|.+.   . .+.+.++.++++|+.+ . .+++           .+     +
T Consensus       205 --~~i~~~~----~~-------G~~-~i~H~~~~~~~-~~~~~~~~~~~~g~~v-l-~~~~-----------~g-----~  251 (386)
T 2vun_A          205 --VTADDVI----KT-------KPD-VVSHINGGPTA-ISVQEVDRIMDETDFA-M-EIVQ-----------CG-----N  251 (386)
T ss_dssp             --CCHHHHH----HH-------CCS-EEETTTCSSSC-CCHHHHHHHHHHCCCE-E-EEES-----------SS-----C
T ss_pred             --HHHHHHH----Hc-------CCC-EEEEccCCCCC-CCHHHHHHHHHcCCeE-E-Eecc-----------CC-----c
Confidence              0122222    22       444 5899766   1 2356777777888876 1 1111           01     0


Q ss_pred             CCCCChhhHHHHHHHHhcCC--ccEEeCCC
Q 015826          342 PPIRDAANKEKLWEALMDGH--IDMLSSDH  369 (399)
Q Consensus       342 Pplr~~~~~~~l~~~l~~G~--id~i~sdh  369 (399)
                          ...+.+.+|++++.|.  ..+++|||
T Consensus       252 ----~~~~~~~~~~~~~~g~~d~v~lgTD~  277 (386)
T 2vun_A          252 ----PKIADYVARRAAEKGQLGRVIFGNDA  277 (386)
T ss_dssp             ----HHHHHHHHHHHHHHTCGGGEEEECCB
T ss_pred             ----ccccHHHHHHHHHcCCCceeEEecCC
Confidence                3456788999999999  55999999

>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*

Probab=99.91  E-value=4.9e-23  Score=205.11  Aligned_cols=172  Identities=21%  Similarity=0.280  Sum_probs=135.2

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCC---------CCCCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~---------~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      .++++|+|++|+++.+...++|+|+||||++|++.....         ...++.++||++|++|+|||||+|+|+..|+.
T Consensus        66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~Pg~  145 (570)
T 4ac7_C           66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQ  145 (570)
T ss_dssp             BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCTTH
T ss_pred             CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEecccccCCcch
Confidence            468999999999988777899999999999999753210         00135689999999999999999999987652


Q ss_pred             CCcCchHHHHHHHHcCCeeeeec-------CcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHH
Q 015826          113 TEWEGFPSGTKAAAAGGITTLID-------MPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL  185 (399)
Q Consensus       113 ~~~e~~~~~~~~al~~GvTtv~d-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  185 (399)
                               .++++++||||+++       ++ ++.|.......++..++.+. ...+++++++.....   ..+++.++
T Consensus       146 ---------~~aAl~gGvTTvv~gg~~p~~~~-n~~p~~~~~~~l~~~l~aa~-~~~v~~~~~g~~~~~---~l~el~el  211 (570)
T 4ac7_C          146 ---------VDVALANGITTLFGGGTGPAEGS-KATTVTPGPWNIEKMLKSTE-GLPINVGILGKGHGS---SIAPIMEQ  211 (570)
T ss_dssp             ---------HHHHHHTTEEEEEEECSSSCHHH-HHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEECCCS---SHHHHHHH
T ss_pred             ---------HHHHHhcCCeEEEecCcCccccc-CCcCcCCcHHHHHHHHHHhh-hCCeeEEEEeccCCc---CHHHHHHH
Confidence                     36899999999994       33 33344445566666666554 456899888754332   46788899


Q ss_pred             HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       186 ~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      .++|+.+||.+..+       ..+++.+++++++|+++|+++.+|+++.
T Consensus       212 ~~aGa~gfK~~~~~-------~~~~~~L~~aL~~A~~~g~~V~iHae~l  253 (570)
T 4ac7_C          212 IDAGAAGLKIHEDW-------GATPASIDRSLTVADEADVQVAIHSDTL  253 (570)
T ss_dssp             HHHTCCEEEEEGGG-------CCCHHHHHHHHHHHHHHTCEEEEECCTT
T ss_pred             HHcCCCeEeeccCC-------CCCHHHHHHHHHHHHHcCCEEEEEcCCc
Confidence            99999999998643       3588999999999999999999999853

>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*

Probab=99.91  E-value=4.9e-23  Score=205.11  Aligned_cols=172  Identities=21%  Similarity=0.280  Sum_probs=135.2

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCC---------CCCCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~---------~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      .++++|+|++|+++.+...++|+|+||||++|++.....         ...++.++||++|++|+|||||+|+|+..|+.
T Consensus        66 ~~dllI~n~~vvd~~g~~~~dI~I~dG~I~~Ig~~~~~~~~~~v~~~~~~~~~~~vIDa~G~~v~PG~ID~HvH~~~Pg~  145 (570)
T 4ubp_C           66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTAGGIDTHVHFINPDQ  145 (570)
T ss_dssp             BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEECEEEEEEECCCTTH
T ss_pred             CCCEEEECeEEECCCCcEEEEEEEECCEEEEeecCCCccccccccccccCCCCceEEeCCCCEEeeCEEEcccCCCCcch
Confidence            468999999999988777899999999999999753210         00135689999999999999999999987652


Q ss_pred             CCcCchHHHHHHHHcCCeeeeec-------CcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHH
Q 015826          113 TEWEGFPSGTKAAAAGGITTLID-------MPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEAL  185 (399)
Q Consensus       113 ~~~e~~~~~~~~al~~GvTtv~d-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l  185 (399)
                               .++++++||||+++       ++ ++.|.......++..++.+. ...+++++++.....   ..+++.++
T Consensus       146 ---------~~aAl~gGvTTvv~gg~~p~~~~-n~~p~~~~~~~l~~~l~aa~-~~~v~~~~~g~~~~~---~l~el~el  211 (570)
T 4ubp_C          146 ---------VDVALANGITTLFGGGTGPAEGS-KATTVTPGPWNIEKMLKSTE-GLPINVGILGKGHGS---SIAPIMEQ  211 (570)
T ss_dssp             ---------HHHHHHTTEEEEEEECCSSCHHH-HHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEECCCS---SHHHHHHH
T ss_pred             ---------HHHHHhcCCeEEEecCccccccC-CCcCCCCcHHHHHHHHHHhh-hCCeeEEEEeccCCc---CHHHHHHH
Confidence                     36899999999994       33 33344445566666666554 456899888754332   46788899


Q ss_pred             HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          186 LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       186 ~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      .++|+.+||.+..+       ..+++.+++++++|+++|+++.+|+++.
T Consensus       212 ~~aGa~gfK~~~~~-------~~~~~~L~~aL~~A~~~g~~V~iHae~l  253 (570)
T 4ubp_C          212 IDAGAAGLKIHEDW-------GATPASIDRSLTVADEADVQVAIHSDTL  253 (570)
T ss_dssp             HHHTCCEEEEEGGG-------CCCHHHHHHHHHHHHHHTCEEEEECCTT
T ss_pred             HHcCCCeEeeccCC-------CCCHHHHHHHHHHHHHcCCEEEEEcCCc
Confidence            99999999998643       3588999999999999999999999853

>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17

Probab=99.91  E-value=1.6e-23  Score=207.39  Aligned_cols=274  Identities=16%  Similarity=0.126  Sum_probs=162.8

Q ss_pred             CccEEEEccEEEcCCC--c-eeeEEEE-ECCEEEEecc--CCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC-C
Q 015826           42 YNQYWLTSKRIVTPKG--V-ISGAVEI-KEGNIISIVS--EEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-E  114 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~--~-~~~~V~I-~dG~I~~Ig~--~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-~  114 (399)
                      ..+++|+|++|+++++  . .+++|+| +||||++|++  ....+   .+.++||++|++|+|||||+|+|+..++.. .
T Consensus        12 ~~~~li~n~~i~~~~~~~~~~~~~v~I~~~g~I~~Vg~~~~~~~~---~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~   88 (458)
T 2p9b_A           12 EPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIP---AEYHYLDGTGKIVMPGLINAHTHLFSQGKPLN   88 (458)
T ss_dssp             CCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCCC---TTCEEEECTTCEEEECEEEEEECSCC------
T ss_pred             CCcEEEEeeEEEeCCCCccccCcEEEEecCCEEEEEeccccCCCC---CCCeEEECCCCEEccceeeeeecccccccccc
Confidence            4588999999999875  3 3689999 9999999987  32211   256799999999999999999999876522 0


Q ss_pred             ---------------cC----------chHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEee-
Q 015826          115 ---------------WE----------GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW-  168 (399)
Q Consensus       115 ---------------~e----------~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  168 (399)
                                     +.          .+...++.++++||||+++++ +..+   ....++...+...... ..+... 
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~---~~~~~~~~~~~g~~~g-~r~~~~g  163 (458)
T 2p9b_A           89 PKLATPKGQRMVATFAHSPLGKPYMAATVKHNATTLLESGVTTIRTLG-DVGY---EVVTLRDQIDAGQILG-PRILASG  163 (458)
T ss_dssp             -----------------------CHHHHHHHHHHHHHHTTEEEEEESC-CSSS---HHHHHHHHHHTTSSCC-CEEECCC
T ss_pred             ccccchhhhhhhhhhhhhcccccHHHHHHHHHHHHHHHcCCcEEEeCC-CCcc---ccHHHHHHHHcCCCCC-CeEEecc
Confidence                           11          233467888999999999987 3211   1122332222111000 111111 


Q ss_pred             ------eeee-------CCC-hhhHHHHHHHHHcCCcEEEEeecCCC-------CCCCCCCCHHHHHHHHHHHHhcCCCE
Q 015826          169 ------GGLV-------PEN-AYNASALEALLNAGVLGLKSFMCPSG-------INDFPMTNASHIKEGLSVLARYKRPL  227 (399)
Q Consensus       169 ------~~~~-------~~~-~~~~~~l~~l~~~G~~~ik~~~~~~~-------~~~~~~~~~~~l~~~~~~a~~~g~~v  227 (399)
                            ++..       ... .+..+.++++.+.|+..+|++.....       ..+.+.+++++++++++.|+++|+++
T Consensus       164 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v  243 (458)
T 2p9b_A          164 PLMAIPEGHGAPLIALTSGTPEEARTAVAQNLKAGVNAIKIAATGGVTDAQEIGEAGSPQMSVEQMRAICDEAHQYGVIV  243 (458)
T ss_dssp             SCEECCCSSCCCCEECCSCCHHHHHHHHHHHHHTTCSCEEEECSCCTTSCCCC------CCCHHHHHHHHHHHHHTTCCE
T ss_pred             cccccCCCCCccccCccCCCHHHHHHHHHHHHHcCCCEEEEEecCCcCCCCccCCCCCCcCCHHHHHHHHHHHHHCCCeE
Confidence                  1100       011 12234566667788889998864210       01234678999999999999999999


Q ss_pred             EEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHH
Q 015826          228 LVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLME  307 (399)
Q Consensus       228 ~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~  307 (399)
                      .+|+++...                                +..++..           |.. .+.|.... . -+.++.
T Consensus       244 ~~H~~~~~~--------------------------------i~~~~~~-----------G~~-~i~H~~~~-~-~~~~~~  277 (458)
T 2p9b_A          244 GAHAQSPEG--------------------------------VRRSLLA-----------GVD-TIEHGSVL-D-DELIGM  277 (458)
T ss_dssp             EEEECSHHH--------------------------------HHHHHHH-----------TCS-EEEECCCC-C-HHHHHH
T ss_pred             EEEeCCHHH--------------------------------HHHHHHc-----------CCC-EEEECCCC-C-HHHHHH
Confidence            999975431                                2222222           221 35565542 1 235666


Q ss_pred             HH------HCCCCEEEEccc--cccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          308 AK------TNGDSITVETCP--HYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       308 ak------~~G~~vt~e~~p--~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                      ++      +.|+.+.+.+.|  +++.+..... .........+|.|....+..+++.+++|...+++|||.
T Consensus       278 ~~~~~~~~~~g~~v~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~gtD~~  347 (458)
T 2p9b_A          278 FRHNPNALRGYSALIPTLSAGLPLTLLGQDVT-GITDIQLENSKNVVGGMVSGARQAHEAGLMIGVGTDTG  347 (458)
T ss_dssp             HHCCTTSTTSCCEEECCHHHHHHHHHSCHHHH-CCCHHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCCCTT
T ss_pred             HhcccccccCCeEEEeecchhhHHHhhhcccc-cCCHHHHHHHHHHHHHHHHHHHHHHHCCCeEEEecCCC
Confidence            66      788766444322  1222221100 00011112244555566788999999999999999984

>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*

Probab=99.90  E-value=3.7e-23  Score=200.42  Aligned_cols=283  Identities=19%  Similarity=0.209  Sum_probs=157.1

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC---cCch
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---WEGF  118 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~---~e~~  118 (399)
                      |..++|+|++|++++...+++|+|+||||++|++....+. .++.++||++|++|+|||||+|+|+...+...   ..+.
T Consensus         7 ~~~~~i~n~~v~~~~~~~~~~v~i~~g~I~~ig~~~~~~~-~~~~~viD~~g~~v~PG~iD~H~H~~~~~~~~~~~~~~~   85 (390)
T 1onw_A            7 AGFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDI-VPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGPTTRTP   85 (390)
T ss_dssp             GCCEEEESCEEESSSEEEECEEEEETTEEEEEETTCCTTS-SSSCEEEECTTCEEEECEEEEEECTTCCBCTTSGGGBCC
T ss_pred             cceEEEECcEEECCCCCccceEEEECCEEEEEecCcccCC-CCCCeEEeCCCCEECcCeeEeeECccccCccccccccCH
Confidence            3468999999999876567899999999999987543110 12457999999999999999999986432110   0111


Q ss_pred             HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeee-CCC---hhhHHHHHHHHHcCCcEEE
Q 015826          119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLV-PEN---AYNASALEALLNAGVLGLK  194 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~l~~l~~~G~~~ik  194 (399)
                      ...++.++++||||+++++ ++.+...+.+.+....+.....+...+...+.+. +..   ......+ .++ ....+++
T Consensus        86 ~~~~~~~~~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~g~~~~~~~~~~~~~~~~~-~~~-~~~~g~~  162 (390)
T 1onw_A           86 EVALSRLTEAGVTSVVGLL-GTDSISRHPESLLAKTRALNEEGISAWMLTGAYHVPSRTITGSVEKDV-AII-DRVIGVK  162 (390)
T ss_dssp             CCCHHHHHHTTEEEEEECC-CSCCSSCCHHHHHHHHHHHHHHTSEEEEEEECSCSSCCCSSSCHHHHH-HHC-TTEEEEE
T ss_pred             HHHHHHHHHCCeeEEecCC-CcccccCcHHHHHHHHHHHHhcCCceEEeccccCCCchhhhhhhcchh-hhH-HHhhcce
Confidence            2246788999999999998 5545444455544444433322222222222111 111   1111111 111 1223345


Q ss_pred             EeecCCCCCCCCCCCHHHHHHHHHHHHhcCC------CEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHH
Q 015826          195 SFMCPSGINDFPMTNASHIKEGLSVLARYKR------PLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAA  268 (399)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~------~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~  268 (399)
                      +.+.+..   .+..+.++++++++.+++.+.      .+++|+.....                               .
T Consensus       163 ~~~~~~~---~~~~~~~~l~~~~~~a~~~~~~~~~~g~~~~h~~~~~~-------------------------------~  208 (390)
T 1onw_A          163 CAISDHR---SAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSKK-------------------------------A  208 (390)
T ss_dssp             EEESSTT---SCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEEECSCTT-------------------------------T
T ss_pred             eeecCCC---CCCCCHHHHHHHHHHHhhhhhhhccCceEEEEeCCCHH-------------------------------H
Confidence            5554431   235788999999888876542      46778632110                               1


Q ss_pred             HHHHHHHHhhhccCCCCCCceEE---EEcCCChhHHH--HHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCC
Q 015826          269 IRELLTVAKDTRTDGPAEGAHLH---IVHLSDASSSL--DLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPP  343 (399)
Q Consensus       269 v~~~~~~a~~~~~~~~~~g~~vh---i~H~s~~~~~l--~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pp  343 (399)
                      +..+.++++..       +.+++   ..|++.. ..+  +.++.+++.|. +.+ .++                  ++||
T Consensus       209 ~~~~~~~~~~g-------~~~v~~l~~~h~~~~-~~~~~~~~~~~~~~~~-~~~-~~~------------------~~~~  260 (390)
T 1onw_A          209 LQPIYDLLENC-------DVPISKLLPTHVNRN-VPLFEQALEFARKGGT-IDI-TSS------------------IDEP  260 (390)
T ss_dssp             THHHHHHHHTC-------CCCGGGEEEECGGGS-HHHHHHHHHHHHTTCC-EEE-ETT------------------CCSS
T ss_pred             HHHHHHHHhcc-------CCceEEeeccccccC-HHHHHHHHHHHhcCCc-ccc-ccc------------------cCCC
Confidence            12223333321       33333   3576543 332  45555555442 111 011                  2344


Q ss_pred             CCChhhHHHHHHHHhcCC-cc--EEeCCCCCCCcccccCCcCCcccccCCcchhccc
Q 015826          344 IRDAANKEKLWEALMDGH-ID--MLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVG  397 (399)
Q Consensus       344 lr~~~~~~~l~~~l~~G~-id--~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~  397 (399)
                         ..+++.+|++++.|. +|  +++|||.|.......    +....++|++|++++
T Consensus       261 ---~~~~~~l~~~~~~g~~~d~i~l~TD~~~~~~~~~~----~~~~~~~g~~~~~~~  310 (390)
T 1onw_A          261 ---VAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFDD----EGNLTHIGVAGFETL  310 (390)
T ss_dssp             ---SCHHHHHHHHHHTTCCGGGEEEECCBTCC-----------------CCCCSHHH
T ss_pred             ---CcCHHHHHHHHHcCCCccceEEEccCCCCCcccCC----ccccccccCCCHHHH
Confidence               258899999999998 88  999999865321111    111246677777664

>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9

Probab=99.90  E-value=5.6e-23  Score=205.22  Aligned_cols=185  Identities=18%  Similarity=0.165  Sum_probs=116.0

Q ss_pred             CCccEEEEccE-EEcCCC--------ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC-
Q 015826           41 PYNQYWLTSKR-IVTPKG--------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP-  110 (399)
Q Consensus        41 ~~~~~li~n~~-vv~~~~--------~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~-  110 (399)
                      ++++++|+|++ |+++++        ..+++|+|+||||++|++..+ .   ++.++||++|++|+|||||+|+|+..+ 
T Consensus         8 ~~~~~li~n~~~i~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~-~---~~~~viD~~G~~v~PG~ID~H~H~~~~~   83 (492)
T 2paj_A            8 TQPSTLIRNAAAIMTGGRGTADDPSRVPGPDIRIVGDTIDAIGALAP-R---PGETIVDATDCVIYPAWVNTHHHLFQSL   83 (492)
T ss_dssp             --CEEEEECBSEEBCCCCSSSSSCSBCCCCCEEEETTEEEEESSCCC-C---TTCEEEECBTCEEEECEECCCCCGGGGG
T ss_pred             CCCCeEEECCEEEEecCCccccccceecccEEEEECCEEEEEcCCCC-C---CCCeEEECCCcEEeeCccccccChhhHh
Confidence            45689999999 999863        347899999999999997542 1   356799999999999999999998754 


Q ss_pred             --CCC--------C--------------cCchHHHHHH----HHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCc
Q 015826          111 --GRT--------E--------------WEGFPSGTKA----AAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIY  162 (399)
Q Consensus       111 --~~~--------~--------------~e~~~~~~~~----al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (399)
                        +..        .              .++++..++.    ++++||||+++++ ++.+.....+.++...+...... 
T Consensus        84 ~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~g-  161 (492)
T 2paj_A           84 LKGEPAGLDATLTPWLAATPYRFRALFDERRFRLAARIGLIELARSGCATVADHN-YVYYPGMPFDSSAILFEEAEKLG-  161 (492)
T ss_dssp             CCSCC-----------------CGGGCCHHHHHHHHHHHHHHHHTTTEEEEEECC-CCCCTTCSSCHHHHHHHHHHHTT-
T ss_pred             hcCccCCCCCCHHHHHHhcccchhhcCCHHHHHHHHHHHHHHHHhcCcEEEEech-hhcccccccchHHHHHHHHHHcC-
Confidence              211        1              1344444444    8999999999997 33332211223333333322211 


Q ss_pred             eeEEeeeeee--C-------------C-ChhhHHHHHHHHHc--CC---cEEEEeecCCCCCCC-CCCCHHHHHHHHHHH
Q 015826          163 VDVGFWGGLV--P-------------E-NAYNASALEALLNA--GV---LGLKSFMCPSGINDF-PMTNASHIKEGLSVL  220 (399)
Q Consensus       163 ~~~~~~~~~~--~-------------~-~~~~~~~l~~l~~~--G~---~~ik~~~~~~~~~~~-~~~~~~~l~~~~~~a  220 (399)
                      +......+..  +             . ..+.+++++++++.  +.   ..++.++.+.+   . +.+++++++++++.|
T Consensus       162 ~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~a  238 (492)
T 2paj_A          162 LRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAARYHDASPRAMRRVVMAPTT---VLYSISPREMRETAAVA  238 (492)
T ss_dssp             CEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHHTCCCSTTCSEEEEECCTT---TTTSSCHHHHHHHHHHH
T ss_pred             CEEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHHhccCCCCCceEEEEeccc---CCCCCCHHHHHHHHHHH
Confidence            1111111110  0             0 01234555566542  21   13566655532   2 357999999999999


Q ss_pred             HhcCCCEEEecCCh
Q 015826          221 ARYKRPLLVHAEME  234 (399)
Q Consensus       221 ~~~g~~v~~H~~~~  234 (399)
                      +++|+++.+|+.+.
T Consensus       239 ~~~g~~v~~H~~~~  252 (492)
T 2paj_A          239 RRLGLRMHSHLSET  252 (492)
T ss_dssp             HHTTCEEEEECC--
T ss_pred             HHcCCcEEEEeCCC
Confidence            99999999999753

>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*

Probab=99.90  E-value=2.8e-23  Score=216.46  Aligned_cols=175  Identities=22%  Similarity=0.268  Sum_probs=126.7

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCC---------CCCCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP---------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~---------~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      ..|++|+|++|+|++++.++||+|+||||++||+.....         ...++.++||++|++|+|||||+|+|+..++ 
T Consensus       336 ~~DLVItNA~IVD~tGi~kADI~IkDGRIaAIGkagnpD~~dgV~pdl~ig~gtEVIDA~GkiVtPGfID~HvHl~~P~-  414 (840)
T 4gy7_A          336 SLDTVITNAVIIDYTGIIKADIGIKDGLIASIGKAGNPDIMNGVFSNMIIGANTEVIAGEGLIVTAGAIDCHVHYICPQ-  414 (840)
T ss_dssp             SCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCSSCCTTSBCCTTCEEEECTTCEEEECEEEEEEECCCTH-
T ss_pred             cCCEEEeCeEEECCCCeEEeeEEEECCEEEEEeccCCcccccccccccccCCCCEEEECCCCEEccCeeeeccCCCCCC-
Confidence            369999999999999988999999999999999642110         0124678999999999999999999987652 


Q ss_pred             CCcCchHHHHHHHHcCCeeeeecCcCCCC------CCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHH
Q 015826          113 TEWEGFPSGTKAAAAGGITTLIDMPLNSD------PSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALL  186 (399)
Q Consensus       113 ~~~e~~~~~~~~al~~GvTtv~d~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~  186 (399)
                              ....++.+|+||+++...+..      ................ ....++++++.....   ...+.++++.
T Consensus       415 --------~~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l~a~-~~~~vn~g~~~~~~~---~~~~~L~el~  482 (840)
T 4gy7_A          415 --------LVYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQST-DDLPLNFGFTGKGSS---SKPDELHEII  482 (840)
T ss_dssp             --------HHHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHHHHT-TTSSSEEEEEEECCC---SSSHHHHHHH
T ss_pred             --------chHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHHhhh-hcceeEEEEeCCCCc---ccHHHHHHhh
Confidence                    345678899999998752110      1111233333333332 234456666543322   2345788888


Q ss_pred             HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhh
Q 015826          187 NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKG  236 (399)
Q Consensus       187 ~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~  236 (399)
                      +.|+.++|.+..+       ..+++.+.++++.++++|..+.+|+++...
T Consensus       483 ~aGa~g~K~~~~~-------~~t~~~i~~aL~~A~e~g~~V~ih~e~~~~  525 (840)
T 4gy7_A          483 KAGAMGLKLHEDW-------GSTPAAIDNCLTIAEHHDIQINIHTDTLNE  525 (840)
T ss_dssp             HHTCSEEEEETTT-------CCCHHHHHHHHHHHHHHTCEEEEECCTTCS
T ss_pred             hceeeEEEecccc-------CCCHHHHHHHHHHHHHhCCEEEEeccCcch
Confidence            8999999987543       357899999999999999999999987553

>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16

Probab=99.89  E-value=2.4e-23  Score=203.87  Aligned_cols=284  Identities=17%  Similarity=0.143  Sum_probs=156.0

Q ss_pred             CCCccEEEEccEEEcCCC-c-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC------
Q 015826           40 LPYNQYWLTSKRIVTPKG-V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG------  111 (399)
Q Consensus        40 ~~~~~~li~n~~vv~~~~-~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~------  111 (399)
                      .+|++++|+|++|+++++ . .+++|+|+||||++|++..+.+..+++.++||++ ++|+|||||+|+|+....      
T Consensus        34 ~~~~~~li~n~~v~~~~~~~~~~~~V~I~~g~I~~vg~~~~~~~~~~~~~viD~~-~~v~PGlID~H~H~~~~~~~g~~~  112 (420)
T 2imr_A           34 DAHTPRLLTCDVLYTGMGGAQSPGGVVVVGETVAAAGHPDELRRQYPHAAEERAG-AVIAPPPVNAHTHLDMSAYEFQAL  112 (420)
T ss_dssp             --CCEEEEEESEEECC---EESSEEEEEETTEEEEEECHHHHHHHCTTCEEEECC-SEESSCCCEEEEESSCCHHHHHHC
T ss_pred             cccccEEEECCEEEeCCCCeeeccEEEEECCEEEEecCcccccccCCCCeeecCC-eEECCCCEecCcCcchhhhhhccC
Confidence            456789999999999875 2 4789999999999998743210001245799999 999999999999997641      


Q ss_pred             -CCCc--------------CchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc---CceeEEeeeeeeC
Q 015826          112 -RTEW--------------EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR---IYVDVGFWGGLVP  173 (399)
Q Consensus       112 -~~~~--------------e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~  173 (399)
                       +..|              ......++.++++||||++|++ +.      .+.++.   .....   ..+.+.... ..+
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~------~~~~~~---~~~~~g~r~~~~~~~~~-~~~  181 (420)
T 2imr_A          113 PYFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIV-WA------PEVMDA---LLAREDLSGTLYFEVLN-PFP  181 (420)
T ss_dssp             HHHHTSHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCEEEEE-CS------HHHHHH---HHTCTTCCEEEEEEECB-CCG
T ss_pred             CHHHHHHHhhhhhhhccCHHHHHHHHHHHHhcCcEEEEEcc-CC------HHHHHH---HHHhcCcEEEEEeeecC-CCc
Confidence             0011              1123456778999999999987 21      233332   12211   112211111 111


Q ss_pred             CC-hhhHHHHHHHH----HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC-ChhhchhHHhhccCc
Q 015826          174 EN-AYNASALEALL----NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE-MEKGSERHVKLEDDT  247 (399)
Q Consensus       174 ~~-~~~~~~l~~l~----~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~-~~~~~~~~~~~~~~~  247 (399)
                      .. .+..++..+++    +.+...++.++.+..   .+.++++++++++++|+++|+++++|+. +.+.+.......+..
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~g~~  258 (420)
T 2imr_A          182 DKADEVFAAARTHLERWRRLERPGLRLGLSPHT---PFTVSHRLMRLLSDYAAGEGLPLQIHVAEHPTELEMFRTGGGPL  258 (420)
T ss_dssp             GGHHHHHHHHHHHHHHHHTTCBTTEEEEEEECC---SSSBCHHHHHHHHHHHHHHTCCBEEEESCSHHHHHHHHHSCSTT
T ss_pred             hhhHHHHHHHHHHHHHHhcccCCceEEEecCCc---CCCcCHHHHHHHHHHHHHCCCcEEEEeCCCHHHHHHHHHhhccc
Confidence            10 01122333332    323344676665532   2357899999999999999999999984 544443332211100


Q ss_pred             -------CCchhh--hcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEE
Q 015826          248 -------LDTRSY--STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVE  318 (399)
Q Consensus       248 -------~~~~~~--~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e  318 (399)
                             .....+  ..+....+..   ..+..+.+...    .. ......|+.|++.  +.++.+++   .|  ++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~----l~-~~~~i~H~~~l~~--~~i~~l~~---~g--~~~~  323 (420)
T 2imr_A          259 WDNRMPALYPHTLAEVIGREPGPDL---TPVRYLDELGV----LA-ARPTLVHMVNVTP--DDIARVAR---AG--CAVV  323 (420)
T ss_dssp             GGGSCGGGSCSSHHHHHTSCCCTTC---CHHHHHHHHTC----GG-GCCEEEECCSCCH--HHHHHHHH---HT--CCEE
T ss_pred             cccccccchhhhhhhhccccccCCC---CHHHHHHHcCC----CC-CCeEEEecCcCCH--HHHHHHHH---cC--CeEE
Confidence                   000000  0000001100   01111111111    00 0134567777764  56666654   35  4677


Q ss_pred             ccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCC
Q 015826          319 TCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT  372 (399)
Q Consensus       319 ~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~  372 (399)
                      +||++...    +   +   ...||+|         +.+++|.+++++|||.+.
T Consensus       324 ~~p~~~~~----~---~---~~~~~l~---------~~~~~Gv~~~lgtD~~~~  358 (420)
T 2imr_A          324 TCPRSNHH----L---E---CGTFDWP---------AFAAAGVEVALGTDSVAS  358 (420)
T ss_dssp             ECHHHHHH----T---T---CCCCCHH---------HHHHTTCCEEECCCCHHH
T ss_pred             ECHHHHHH----h---c---cCCCCHH---------HHHHCCCeEEEECCCCcc
Confidence            89975321    1   1   0145554         578899999999999653

>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18

Probab=99.89  E-value=1.2e-21  Score=191.57  Aligned_cols=187  Identities=17%  Similarity=0.157  Sum_probs=118.1

Q ss_pred             CCCccEEEEccEEEcCCC--c-eeeEEEEECCEEEEeccCCCCCCCCCCC--cEEeCCCCEEecceeecccccCCCCC-C
Q 015826           40 LPYNQYWLTSKRIVTPKG--V-ISGAVEIKEGNIISIVSEEDWPRNSKTG--QVVDYGEAVIMPGLIDVHAHLDDPGR-T  113 (399)
Q Consensus        40 ~~~~~~li~n~~vv~~~~--~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~--~vID~~G~~vlPGlID~H~H~~~~~~-~  113 (399)
                      .+.++++|+|++|+++++  . .+++|+|+||||++|++.. .+   ++.  ++||++|++|+|||||+|+|+...+. .
T Consensus         4 ~~~~~~li~n~~v~~~~~~~~~~~~~v~I~~g~I~~vg~~~-~~---~~~~~~viD~~g~~v~PGlID~H~H~~~~~~~~   79 (418)
T 2qs8_A            4 DVDSKTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGF-IS---SNDFEDYIDLRDHTVLPGLMDMHVHFGQEYQSK   79 (418)
T ss_dssp             ---CCEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESC-CC---CTTSSEEEEEEEEEEEECEEEEEECTTCCCCCT
T ss_pred             CCCccEEEEeeEEEeCCCCccccCcEEEEECCEEEEEeCCC-CC---CCCcceEEECCCCEECCCeeeeeeccccCCCCC
Confidence            455689999999999876  3 4689999999999999754 11   255  89999999999999999999986532 1


Q ss_pred             Cc-------Cch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc-CceeEE-----eeeee-----
Q 015826          114 EW-------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDVG-----FWGGL-----  171 (399)
Q Consensus       114 ~~-------e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~~~~~-----  171 (399)
                      .|       +..    ...++.++++||||++|++ +..+   ....++...+..... ..+...     ..++.     
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~---~~~~~~~~~~~g~~~~~r~~~~~~~~~~~g~~~~~~~  155 (418)
T 2qs8_A           80 AQAPIKVEREMQAILATQHAYVTFKSGFTTVRQVG-DSGL---VAISLRDAINSGKLAGPRIFAAGKTIATTGGHADPTN  155 (418)
T ss_dssp             TTSCSCCCHHHHHHHHHHHHHHHHHTTEEEEEECC-CSSS---HHHHHHHHHHTTSSCCCEEEECCSCBEETTCTTCTTT
T ss_pred             chhhhcCCHHHHHHHHHHHHHHHHHcCCCEEEeCC-CCcc---ccHHHHHHHHCCCCCCCeEEecCccccccCCCccccc
Confidence            11       111    1256788999999999986 2111   112233322221100 011100     00000     


Q ss_pred             ----------------eCCChhhHHHHHHHHHcCCcEEEEeecCCC-----CCCCCCCCHHHHHHHHHHHHhcCCCEEEe
Q 015826          172 ----------------VPENAYNASALEALLNAGVLGLKSFMCPSG-----INDFPMTNASHIKEGLSVLARYKRPLLVH  230 (399)
Q Consensus       172 ----------------~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~-----~~~~~~~~~~~l~~~~~~a~~~g~~v~~H  230 (399)
                                      .....+..+.+++..+.|+..+|++.....     ..+.+.+++++++++++.|+++|+++.+|
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~l~~~~~~A~~~g~~v~~H  235 (418)
T 2qs8_A          156 GKAVDDYDYPVPEQGVVNGPYEVYAAVRQRYKDGADGIKITVTGGVLSVAKSGQNPQFTQEEVDAVVSAAKDYGMWVAVH  235 (418)
T ss_dssp             TCCGGGCCCCCGGGTEECSHHHHHHHHHHHHHHTCSEEEEECBCCSSSSSSCSSCBCSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred             cccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEE
Confidence                            000011233344455678889999864310     01224678999999999999999999999


Q ss_pred             cCCh
Q 015826          231 AEME  234 (399)
Q Consensus       231 ~~~~  234 (399)
                      +.+.
T Consensus       236 ~~~~  239 (418)
T 2qs8_A          236 AHGA  239 (418)
T ss_dssp             ECSH
T ss_pred             ECCH
Confidence            9753

>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}

Probab=99.88  E-value=2.1e-21  Score=188.73  Aligned_cols=257  Identities=13%  Similarity=0.099  Sum_probs=157.2

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC---------
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR---------  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~---------  112 (399)
                      +++++|+|++|+++++.  ++|+|+||||++|++..+.    ++.++||++|++|+|||||+|+|+.....         
T Consensus         4 ~~~~li~n~~v~~~~~~--~~v~I~~g~I~~vg~~~~~----~~~~viD~~G~~v~PGlID~H~H~~~~~~~~~~~~~~~   77 (403)
T 2qt3_A            4 DFDLIIRNAYLSEKDSV--YDIGIVGDRIIKIEAKIEG----TVKDEIDAKGNLVSPGFVDAHTHMDKSFTSTGERLPKF   77 (403)
T ss_dssp             CEEEEEEEEEETTTTEE--EEEEEETTEEEEEESSCCS----CEEEEEECTTCBEEECEEEEEECGGGTTTTCSSSSCTT
T ss_pred             ccceEEEeeEecCCCee--EEEEEECCEEEEeecCCCC----CccceEcCCCCEecccceeeeeccchhhcccccccccc
Confidence            45899999999987653  8999999999999976432    23579999999999999999999976432         


Q ss_pred             -CC-c------------------CchHH----HHHHHHcCCeeeeecCcCCCCCCC--CcHHHHHHHHHHHhccCceeEE
Q 015826          113 -TE-W------------------EGFPS----GTKAAAAGGITTLIDMPLNSDPST--ISTETLKLKVDAAEKRIYVDVG  166 (399)
Q Consensus       113 -~~-~------------------e~~~~----~~~~al~~GvTtv~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~  166 (399)
                       .. +                  ++++.    ....++++||||++++. +..+..  ...+.+.+..+...  ...+..
T Consensus        78 ~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~  154 (403)
T 2qt3_A           78 WSRPYTRDAAIEDGLKYYKNATHEEIKRHVIEHAHMQVLHGTLYTRTHV-DVDSVAKTKAVEAVLEAKEELK--DLIDIQ  154 (403)
T ss_dssp             CSSCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEE-ECSTTTTTHHHHHHHHHHHHHT--TTCEEE
T ss_pred             cCCCcccCcCHHHHHHHhhhcCHHHHHHHHHHHHHHHHHcCCcEEEEEE-cccCccccchHHHHHHHHHHhh--cceeEE
Confidence             00 0                  11122    35678899999998765 222211  11222222222222  222222


Q ss_pred             eeeeeeC----CChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHh
Q 015826          167 FWGGLVP----ENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVK  242 (399)
Q Consensus       167 ~~~~~~~----~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~  242 (399)
                      ... +..    ...+..+.++++.+.|+..++. +.+.   ....+++++++++++.|+++|+++++|+......     
T Consensus       155 ~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~p~---~~~~~~~~~l~~~~~~A~~~g~~v~~H~~~~~~~-----  224 (403)
T 2qt3_A          155 VVA-FAQSGFFVDLESESLIRKSLDMGCDLVGG-VDPA---TRENNVEGSLDLCFKLAKEYDVDIDYHIHDIGTV-----  224 (403)
T ss_dssp             EEE-ECTTCTTTSTTHHHHHHHHHHTTCSEEEC-BCTT---TTTSCHHHHHHHHHHHHHHTTCEEEEEECCCHHH-----
T ss_pred             EEE-cCCcccccCcchHHHHHHHHhcCCCeEEE-ecCC---CCCCChHHHHHHHHHHHHHcCCCeEEEeCCcccc-----
Confidence            111 111    1223456677777778765542 2222   1224566899999999999999999998643210     


Q ss_pred             hccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHH------HHHHHHHHHCCCCEE
Q 015826          243 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSS------LDLLMEAKTNGDSIT  316 (399)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~------l~~i~~ak~~G~~vt  316 (399)
                                            ...++..+++.+++.+     .+.++.+.|.... ..      -+.++..++.|+.+ 
T Consensus       225 ----------------------~~~~~~~~~~~~~~~g-----~~~~~~i~H~~~~-~~~~~~~~~~~~~~l~~~g~~v-  275 (403)
T 2qt3_A          225 ----------------------GVYSINRLAQKTIENG-----YKGRVTTSHAWCF-ADAPSEWLDEAIPLYKDSGMKF-  275 (403)
T ss_dssp             ----------------------HHHHHHHHHHHHHHTT-----CTTSEEEEECTHH-HHSCHHHHHHHHHHHHHHTCEE-
T ss_pred             ----------------------hhHHHHHHHHHHHHcC-----CCCCeEEEehhhh-ccCChhhHHHHHHHHHHcCCEE-
Confidence                                  0123444455555431     1346789998753 21      25666666666544 


Q ss_pred             EEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          317 VETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       317 ~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                       .+||.                     ++.  ....+++.++.|...+++||+.
T Consensus       276 -~~~p~---------------------~~~--~~~~~~~~~~~Gv~v~lgtD~~  305 (403)
T 2qt3_A          276 -VTCFS---------------------STP--PTMPVIKLLEAGINLGCASDNI  305 (403)
T ss_dssp             -EEETT---------------------TCC--TTCCHHHHHHTTCEEEEECCSC
T ss_pred             -EECCC---------------------CCC--CCCCHHHHHHcCCcEEEeCCCC
Confidence             44552                     111  1123567778899999999986

>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}

Probab=99.88  E-value=1.6e-21  Score=193.47  Aligned_cols=183  Identities=16%  Similarity=0.136  Sum_probs=114.0

Q ss_pred             CCCccEEEEccEEEcCCC----------ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCC
Q 015826           40 LPYNQYWLTSKRIVTPKG----------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDD  109 (399)
Q Consensus        40 ~~~~~~li~n~~vv~~~~----------~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~  109 (399)
                      .++++++|+|++|+++++          ..+++|+|+||||++|++....  .+++.++||++|++|+|||||+|+|+.+
T Consensus        20 ~~~~~~li~~~~v~~~~~~~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~--~~~~~~viD~~g~~v~PGlID~H~H~~~   97 (468)
T 3lnp_A           20 KAHADLRINSHWIIPIENTTDHNLVSNILIDHCLLIKDGIILAIEPQSSC--QIPATETLDLGQQVLMPGWVNAHGHAAM   97 (468)
T ss_dssp             -CCEEEEEEEEEECCSSCC-----CCSCEEEEEEEEETTEEEEEEETTTC--CCCEEEEEECCSEEEEECEEECSCCGGG
T ss_pred             CccccEEEECCEEEeecCCcccccCccEecceEEEEECCEEEEEeCCccc--cCCCCeEEeCCCcEEEeCeechhhChhh
Confidence            345789999999998653          2389999999999999986541  1235689999999999999999999953


Q ss_pred             C---CC---------------------CCcCchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC
Q 015826          110 P---GR---------------------TEWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI  161 (399)
Q Consensus       110 ~---~~---------------------~~~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (399)
                      .   +.                     .+.++++    .....++++||||++|++.       ..+.+.+.......+.
T Consensus        98 ~~~~g~~~~~~l~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~~~~~~~~~g~r~  170 (468)
T 3lnp_A           98 SLFRGLADDLPLMTWLQEHVWPAEAQHVDEHFVKQGTELAIAEMIQSGTTTFADMYF-------YPQQSGEAALAAGIRA  170 (468)
T ss_dssp             GGGTTSSCSCCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECCS-------CHHHHHHHHHHHTCEE
T ss_pred             hhhccCcCCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc-------CHHHHHHHHHHcCCeE
Confidence            2   11                     1111222    2355678999999999852       1222222222222222


Q ss_pred             ceeEEeeeee---eCCChhhHHHHHHHHH--cCCc-----EEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015826          162 YVDVGFWGGL---VPENAYNASALEALLN--AGVL-----GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA  231 (399)
Q Consensus       162 ~~~~~~~~~~---~~~~~~~~~~l~~l~~--~G~~-----~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~  231 (399)
                      .+.+.....-   .....+..+...++++  .+..     .++..+.+..   .+.+++++++++++.|+++|+++++|+
T Consensus       171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~  247 (468)
T 3lnp_A          171 VCFAPVLDFPTNYAQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHA---PYTVSDEPLKEITMLSDQLDMPVQIHL  247 (468)
T ss_dssp             EEEEEECSSCCSSCSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECC---TTTSCHHHHHHHHHHHHHHTCCEEEEE
T ss_pred             EEeccccCCCcccccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCC---CCCCCHHHHHHHHHHHHHcCCcEEEEe
Confidence            2222221100   0111223344444433  1322     4555554432   245789999999999999999999998


Q ss_pred             CCh
Q 015826          232 EME  234 (399)
Q Consensus       232 ~~~  234 (399)
                      .+.
T Consensus       248 ~e~  250 (468)
T 3lnp_A          248 HET  250 (468)
T ss_dssp             SCS
T ss_pred             CCC
Confidence            543

>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*

Probab=99.88  E-value=6.3e-22  Score=195.12  Aligned_cols=270  Identities=15%  Similarity=0.145  Sum_probs=156.7

Q ss_pred             CCccEEEEccEEEcCCC----ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC---CCC
Q 015826           41 PYNQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---GRT  113 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~~~  113 (399)
                      ++++++|+|++|+++++    ..+++|+|+||||++|++..+.+ ..++.++||++|++|+|||||+|+|+.+.   +..
T Consensus         4 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~vg~~~~~~-~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~   82 (447)
T 4f0r_A            4 SRYEKIISARWIITVETDGEVLENHAIAIRDGKIAAIIPAADAA-GLEADERLELPDHVLMPGLINLHGHSAMSLLRGLA   82 (447)
T ss_dssp             -CEEEEEEEEEEECCSSTTCEEEEEEEEEETTEEEEEEEHHHHT-TSCEEEEEEEEEEEEEECEEEEEECGGGGGGTTSS
T ss_pred             CcccEEEECCEEEeeCCCCcEeeceEEEEECCEEEEEecccccc-cCCCCeEEeCCCcEEeeCccchhhChhhHhhccCC
Confidence            34689999999998654    24899999999999999754322 12356899999999999999999999543   111


Q ss_pred             ---------------------CcCchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEee
Q 015826          114 ---------------------EWEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW  168 (399)
Q Consensus       114 ---------------------~~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (399)
                                           +.++++    .....++++||||++++..       ..+.+.+.......+..+.....
T Consensus        83 ~~~~~~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~~~~~~~~~g~r~~~~~~~~  155 (447)
T 4f0r_A           83 DDKALMDWLTNYIWPTEGKHVHDDFVFDGSLLAMGEMIRGGTTTINDMYF-------YNAAVARAGLASGMRTFVGCSIL  155 (447)
T ss_dssp             CSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEECBS-------CHHHHHHHHHHHTCEEEEEEEEC
T ss_pred             CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc-------CHHHHHHHHHHcCCeEEEEchhc
Confidence                                 111222    2345678999999999862       12222222222222222222221


Q ss_pred             eeee---CCChhhHHHHHHHHHc--CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh-hhchhHHh
Q 015826          169 GGLV---PENAYNASALEALLNA--GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME-KGSERHVK  242 (399)
Q Consensus       169 ~~~~---~~~~~~~~~l~~l~~~--G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~-~~~~~~~~  242 (399)
                      ....   ....+.++++.++.+.  |...+++.+.+..   .+.++.++++++++.|+++|+++++|+.+. +.+...+.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~  232 (447)
T 4f0r_A          156 EFPTNYASNADDYIAKGMAERSQFLGEDLLTFTLAPHA---PYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVK  232 (447)
T ss_dssp             SSCCSSCSSHHHHHHHHHHHHHTTTTCTTEEEEEEECC---GGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHH
T ss_pred             CCCcccccCHHHHHHHHHHHHHHhcCCCceEEEEecCC---CCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHH
Confidence            1000   1112334555555553  5556666655432   235789999999999999999999998544 33322222


Q ss_pred             hccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEcccc
Q 015826          243 LEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPH  322 (399)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~  322 (399)
                      ..+             .       ..+.    .+++.+.    .+.+..+.|....  +-+.++.+++.|  +.+.+||.
T Consensus       233 ~~g-------------~-------~~i~----~~~~~g~----~~~~~~~~H~~~~--~~~~~~~~~~~g--~~~~~~p~  280 (447)
T 4f0r_A          233 EHG-------------Q-------RPLA----RLQRLGL----LSPRLVAAHMVHL--NDAEVELAARHG--LSTAHNPA  280 (447)
T ss_dssp             HHS-------------S-------CHHH----HHHHHTC----CSTTEEEEECCSC--CHHHHHHHHHHT--CEEEECHH
T ss_pred             HcC-------------C-------CHHH----HHHHcCC----CCCCcEEEeccCC--CHHHHHHHHHcC--CEEEECch
Confidence            111             0       0111    1222211    1345566666542  112344444445  45556774


Q ss_pred             ccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCC
Q 015826          323 YLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT  372 (399)
Q Consensus       323 ~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~  372 (399)
                      .-...     ..+     .+|         +++.+..|...+++||+.+.
T Consensus       281 ~~~~~-----~~~-----~~~---------~~~~~~~Gv~v~lgTD~~~~  311 (447)
T 4f0r_A          281 SNMKL-----ASG-----ISP---------VSKLMDAGVAVGIGTDGAAS  311 (447)
T ss_dssp             HHHHT-----TCC-----CCC---------HHHHHHTTCEEEECCCCGGG
T ss_pred             hhhhc-----CCC-----CCc---------HHHHHHCCCcEEEeCCCCcC
Confidence            21110     011     122         66778899999999999765

>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9

Probab=99.88  E-value=8.5e-22  Score=193.83  Aligned_cols=183  Identities=19%  Similarity=0.187  Sum_probs=111.3

Q ss_pred             CCCccEEEEccEEEcCCC-----ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC---C
Q 015826           40 LPYNQYWLTSKRIVTPKG-----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP---G  111 (399)
Q Consensus        40 ~~~~~~li~n~~vv~~~~-----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~---~  111 (399)
                      .+|.+++|+|++|++++.     ..+++|+|+||||++|++.....  .++.++||++|++|+|||||+|+|+...   +
T Consensus         6 ~~m~~~li~~~~v~~~~~~~~~~~~~~~v~I~~g~I~~ig~~~~~~--~~~~~viD~~G~~v~PGlID~H~H~~~~~~~g   83 (439)
T 2i9u_A            6 KDINLKIFKGNLIFTKTSDKFTIMKDSYIVVIDGKIASVSSNLPDK--YKGNPIIDFRNNIIIPGMNDLHAHASQYKNLG   83 (439)
T ss_dssp             ---CEEEEEEEEEEEEETTEEEEEEEEEEEEETTEEEEEESSCCGG--GTTSCEEEEEEEEEEECEEEEEEEGGGGGGTT
T ss_pred             CCcccEEEEeeEEEecCCccceEEeccEEEEECCEEEEeccccccc--CCCceEEcCCCeEEEecceecccccchHhhhC
Confidence            356789999999999762     24789999999999998643211  1245799999999999999999999753   2


Q ss_pred             CC---------------------CcCchHHH----HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc-CceeE
Q 015826          112 RT---------------------EWEGFPSG----TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR-IYVDV  165 (399)
Q Consensus       112 ~~---------------------~~e~~~~~----~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~  165 (399)
                      ..                     +.++++..    .+.++++||||+++++ +.     ..+.+...++..... ....+
T Consensus        84 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~-~~-----~~~~~~~~~~~~~~~g~r~~~  157 (439)
T 2i9u_A           84 IGMDKELLPWLNNYTFPEEAKFLNVDYAKKTYGRLIKDLIKNGTTRVALFA-TL-----HKDSTIELFNMLIKSGIGAYV  157 (439)
T ss_dssp             CCCSSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEEC-CS-----CHHHHHHHHHHHHHHTCEEEE
T ss_pred             CcCCCCHHHHHHhcccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEcc-cc-----ccchHHHHHHHHHHcCCEEEE
Confidence            11                     01112222    3578999999999976 22     122233333322211 11111


Q ss_pred             E--eeeeeeC----CC-hhhHHHHHHHHH---cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          166 G--FWGGLVP----EN-AYNASALEALLN---AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       166 ~--~~~~~~~----~~-~~~~~~l~~l~~---~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      +  ......+    .. .+..++..++++   .+...++.++.+..   .+.++.+.++++++.|+++|+++.+|+.+
T Consensus       158 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  232 (439)
T 2i9u_A          158 GKVNMDYNCPDYLTENYITSLNDTEEIILKYKDKSNIVKPIITPRF---VPSCSNELMDGLGKLSYKYRLPVQSHLSE  232 (439)
T ss_dssp             ECEECCSSCCTTSCCCHHHHHHHHHHHHHHHTTTCSSEEECBEECC---GGGCCHHHHHHHHHHHHHHTCCEEEEESC
T ss_pred             EeeeccccCCcccchhHHHHHHHHHHHHHHHhCCCCceEEEEecCC---cCcCCHHHHHHHHHHHHhcCCcEEEeecC
Confidence            1  1110001    01 112333444443   33334566554421   13568999999999999999999999865

>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}

Probab=99.88  E-value=7.2e-22  Score=194.93  Aligned_cols=182  Identities=15%  Similarity=0.154  Sum_probs=114.2

Q ss_pred             CCccEEEEccEEEcCCC----ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC----
Q 015826           41 PYNQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR----  112 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~----  112 (399)
                      ++++++|+|++|+++++    ..+++|+|+||||++|++..+.. .+++.++||++|++|+|||||+|+|+.+..+    
T Consensus         6 ~~~~~li~~~~v~~~~~~~~~~~~~~v~i~~g~I~~ig~~~~~~-~~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~   84 (451)
T 4dyk_A            6 NPFDLLLLPTWIVPVEPAGVVLRDHALGIRDGQIALVAPREQAM-RHGATEIRELPGMLLAPGLVNAHGHSAMSLFRGLA   84 (451)
T ss_dssp             CCEEEEEEEEEECCSSSTTCCEESEEEEEETTEEEEEEEHHHHT-TTCEEEEEEEEEEEEEECEEECCCCGGGGGGTTSS
T ss_pred             chhcEEEECCEEEeeCCCCcEEeccEEEEECCEEEEEeCccccc-cCCCCeEEeCCCCEEeecccchhhChhhHHhccCC
Confidence            45789999999999653    24799999999999999754321 1235689999999999999999999943311    


Q ss_pred             --------------------CCcCchHH----HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEee
Q 015826          113 --------------------TEWEGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW  168 (399)
Q Consensus       113 --------------------~~~e~~~~----~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (399)
                                          .+.++++.    ....++++||||++|+..       ..+.+.+..+....+..+.....
T Consensus        85 ~~~~l~~wl~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~~~~a~~~~g~r~~~~~~~~  157 (451)
T 4dyk_A           85 DDLPLMTWLQDHIWPAEGQWVSEDFIRDGTELAIAEQVKGGITCFSDMYF-------YPQAICGVVHDSGVRAQVAIPVL  157 (451)
T ss_dssp             CSSCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECS-------CHHHHHHHHHHHTCEEEEEEEEC
T ss_pred             CCCCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc-------CHHHHHHHHHHcCCeEEEEchhh
Confidence                                11122332    234567999999999862       12333332222222222222211


Q ss_pred             eeee---CCChhhHHHHHHHHH--cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          169 GGLV---PENAYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       169 ~~~~---~~~~~~~~~l~~l~~--~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ..-.   ....+..++..++.+  .+...++..+.++.   .+.++++.++++++.|+++|+++++|+.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~~H~~e  224 (451)
T 4dyk_A          158 DFPIPGARDSAEAIRQGMALFDDLKHHPRIRIAFGPHA---PYTVSDDKLEQILVLTEELDASIQMHVHE  224 (451)
T ss_dssp             SSCBTTBSSHHHHHHHHHHHHHHTTTCSSEEEEEEECC---GGGSCHHHHHHHHHHHHHHTCCEEEEESC
T ss_pred             CCCCccccCHHHHHHHHHHHHHHhcCCCceEEEEecCC---CCccCHHHHHHHHHHHHHcCCcEEEEeCC
Confidence            1000   111223444445443  24444555554432   23578999999999999999999999844

>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}

Probab=99.87  E-value=1.3e-21  Score=194.40  Aligned_cols=268  Identities=14%  Similarity=0.134  Sum_probs=152.5

Q ss_pred             ccEEEEccEEEcCCC----ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC-----
Q 015826           43 NQYWLTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-----  113 (399)
Q Consensus        43 ~~~li~n~~vv~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-----  113 (399)
                      ++++|+|++|+++++    ..+++|+|+||||++|++..+.+...++.++||++|++|+|||||+|+|+.+....     
T Consensus        14 ~d~li~~~~v~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~viD~~g~~v~PGlID~H~Hl~~~~~~g~~~~   93 (472)
T 4dzh_A           14 CDLLIEAGYVVPIEPHAVVLEDHAVAVSNGVIVAVLPTADARVRFAPARTVSRPDAALMPGLVNAHTHNPMTLLRGVADD   93 (472)
T ss_dssp             EEEEEEEEEECCSSSTTCCEEEEEEEEETTEEEEEEEHHHHHHHEEEEEEEEEEEEEEEECEEEEEECGGGGGGTTSSCS
T ss_pred             CcEEEECCEEEecCCCCcEecceEEEEECCEEEEEeCchhhhhcCCCCeEEeCCCcEEEECccccccChhhHHhccccCC
Confidence            678999999998753    25899999999999999754321001245799999999999999999999653211     


Q ss_pred             -------------------CcCchHH----HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeee
Q 015826          114 -------------------EWEGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG  170 (399)
Q Consensus       114 -------------------~~e~~~~----~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (399)
                                         +.++++.    ....++++||||++|++.       ..+.+.+.......+..+.+.....
T Consensus        94 ~~l~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~~~~a~~~~g~r~~~~~~~~~~  166 (472)
T 4dzh_A           94 LPLMVWLQQHIWPVEAAVIGPEFVADGTTLAIAEMLRGGTTCVNENYF-------FADVQAAVYKQHGFRALVGAVIIDF  166 (472)
T ss_dssp             CCHHHHHHHTHHHHHHHHCSHHHHHHHHHHHHHHHHHTTEEEEEEECS-------CHHHHHHHHHHTTCEEEEEEEECSS
T ss_pred             CCHHHHHHHhhhhhhhccCCHHHHHHHHHHHHHHHHhCCcEEEEEccc-------CHHHHHHHHHHhCCeEEEEecccCC
Confidence                               1111111    344589999999999862       1222222222221122222222110


Q ss_pred             e---eCCChhhHHHHHHHHH--cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC-ChhhchhHHhhc
Q 015826          171 L---VPENAYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE-MEKGSERHVKLE  244 (399)
Q Consensus       171 ~---~~~~~~~~~~l~~l~~--~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~-~~~~~~~~~~~~  244 (399)
                      .   .....+.++++.++.+  .+...++..+.+..   .+.+++++++++++.|+++|+++++|+. +.......+...
T Consensus       167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~  243 (472)
T 4dzh_A          167 PTAWASSDDEYFARAGELHDQWRDDPLISTAFAPHA---PYTVNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQY  243 (472)
T ss_dssp             CCSSCSSHHHHHHHHHHHHHHHTTCSSEEEEEEECC---TTTSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHH
T ss_pred             CcccccCHHHHHHHHHHHHHHhCCCCceEEEEecCC---CCCCCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence            0   0111233444444443  23334555554432   2357899999999999999999999984 433332222211


Q ss_pred             cCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh-hHHHHHHHHHHHCCCCEEEEccccc
Q 015826          245 DDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-SSSLDLLMEAKTNGDSITVETCPHY  323 (399)
Q Consensus       245 ~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-~~~l~~i~~ak~~G~~vt~e~~p~~  323 (399)
                      +             .+       .+..+.++..        .+.+..+.|.... .+.++.   +++.|+  .+.+||..
T Consensus       244 g-------------~~-------~i~~~~~~g~--------~~~~~~~~H~~~l~~~~i~~---l~~~g~--~v~~~p~s  290 (472)
T 4dzh_A          244 G-------------QR-------PLARLDRLGL--------VNDRLIAVHMTQLTEAEIHL---CAERGV--SVVHCPES  290 (472)
T ss_dssp             S-------------SC-------HHHHHHHHTC--------CSTTEEEEECCSCCHHHHHH---HHHHTC--EEEECHHH
T ss_pred             C-------------CC-------HHHHHHHcCC--------CCCCeEEEeccCCCHHHHHH---HHHcCC--EEEEChHH
Confidence            1             00       1222222221        1445566666532 034444   444454  55567742


Q ss_pred             cccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCC
Q 015826          324 LAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPT  372 (399)
Q Consensus       324 L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~  372 (399)
                      -..    + ..+     .+|         +.+.++.|...+++||+.+.
T Consensus       291 ~~~----~-~~~-----~~~---------~~~~~~~Gv~v~lgtD~~~~  320 (472)
T 4dzh_A          291 NLK----L-ASG-----FCP---------ACALQRASVNLAIGTDGCAS  320 (472)
T ss_dssp             HHH----T-TCC-----CCC---------HHHHHHTTCEEEECCCCTTS
T ss_pred             HHh----c-CCC-----Ccc---------HHHHHHCCCCEEEECCCCcC
Confidence            111    0 011     122         56677889999999998753

>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}

Probab=99.87  E-value=2.6e-22  Score=196.28  Aligned_cols=251  Identities=20%  Similarity=0.210  Sum_probs=152.2

Q ss_pred             ccEEEEccEEEcCCC---ceeeEEEEE-CCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCch
Q 015826           43 NQYWLTSKRIVTPKG---VISGAVEIK-EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF  118 (399)
Q Consensus        43 ~~~li~n~~vv~~~~---~~~~~V~I~-dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~  118 (399)
                      ++++|+|++|+++++   ..+++|+|+ ||||++|++..+.+   .+.++||++|++|+|||||+|+|+..++...+++ 
T Consensus        15 ~~~li~n~~vv~~~~~~~~~~~~v~I~~~g~I~~Ig~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~~~~~~~~~-   90 (417)
T 2ogj_A           15 APILLTNVKPVGFGKGASQSSTDILIGGDGKIAAVGSALQAP---ADTQRIDAKGAFISPGWVDLHVHIWHGGTDISIR-   90 (417)
T ss_dssp             CCEEEEEEEECSSCTTCCCSCEEEEECTTSBEEEEETTCCCS---SCEEECCC--CEEEECEEEEEECCCBTTBSSCCC-
T ss_pred             CcEEEECCEEEcCCCCccCccceEEEecCCEEEEeccCCCCC---CCCeEEECCCCEEccCeeeccccccccccccCCC-
Confidence            589999999999875   357899999 99999998753221   2457999999999999999999998765443322 


Q ss_pred             HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHH-HHHHHhc--cCceeEEeeeeeeC-----CC----hhhHHHHHHHH
Q 015826          119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL-KVDAAEK--RIYVDVGFWGGLVP-----EN----AYNASALEALL  186 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~-----~~----~~~~~~l~~l~  186 (399)
                        ..+.++++||||++|++ +..+  .+.+.+.. ..+....  ..++++...+ ...     ..    ....+++++++
T Consensus        91 --~~~~~l~~GvTtv~d~~-~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~G-~~~~~~~~e~~~~~~~~~~~~~~~~  164 (417)
T 2ogj_A           91 --PSECGAERGVTTLVDAG-SAGE--ANFHGFREYIIEPSRERIKAFLNLGSIG-LVACNRVPELRDIKDIDLDRILECY  164 (417)
T ss_dssp             --GGGTSGGGTEEEEEEES-SCCS--TTHHHHHHHTTTTCSSEEEEEEESSTTT-TTTTTTSCSCSSGGGCCHHHHHHHH
T ss_pred             --HHHHHHhCCcCeEEeCC-cCCC--cCHHHHHHHHhhccccCeEEEeccccCc-CCCCCCcccccchhhcCHHHHHHHH
Confidence              23467899999999987 3322  23333322 1111110  1111111111 111     00    01235666666


Q ss_pred             Hc---CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChH
Q 015826          187 NA---GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPS  263 (399)
Q Consensus       187 ~~---G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~  263 (399)
                      +.   ++.++|.++.+..   ...++.+.+++++++|+++|+++.+|+++....                          
T Consensus       165 ~~~~~~~~~ik~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~--------------------------  215 (417)
T 2ogj_A          165 AENSEHIVGLKVRASHVI---TGSWGVTPVKLGKKIAKILKVPMMVHVGEPPAL--------------------------  215 (417)
T ss_dssp             HTCTTTEEEEEEEESHHH---HTTCTTHHHHHHHHHHHHHTCCEEEEECSSSSC--------------------------
T ss_pred             HhCCCceEEEEEEecCCc---cccccHHHHHHHHHHHHHcCCcEEEEcCCCccc--------------------------
Confidence            54   4567888765321   123577888999999999999999999653210                          


Q ss_pred             HHHHHHHHHHHHHhhhccCCCCCCceEEEEcCC----------ChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC
Q 015826          264 WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS----------DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD  333 (399)
Q Consensus       264 ~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s----------~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~  333 (399)
                           +..+....+.        |  ..+.|..          +. ...+.+++++++|+  .++++|+..         
T Consensus       216 -----~~~~~~~l~~--------g--~~~~H~~~~~~~~~~~~~~-~~~~~i~~~~~~g~--~v~~~~~~~---------  268 (417)
T 2ogj_A          216 -----YDEVLEILGP--------G--DVVTHCFNGKSGSSIMEDE-DLFNLAERCAGEGI--RLDIGHGGA---------  268 (417)
T ss_dssp             -----HHHHHHHCCT--------T--CEEETTTCCCTTTCTTSCH-HHHHHHHHC--CCC--EEECCBCSS---------
T ss_pred             -----HHHHHHHhcC--------C--CEEEeccCCCccchhccCH-HHHHHHHHHHhcCc--EEEecCCCc---------
Confidence                 0111111110        1  2344532          33 45677777777774  445565311         


Q ss_pred             CCcceEEcCCCCChhhHHHHHHHHhcC-CccEEeCCCCCCC
Q 015826          334 GDTRFKCAPPIRDAANKEKLWEALMDG-HIDMLSSDHSPTV  373 (399)
Q Consensus       334 ~~~~~~~~Pplr~~~~~~~l~~~l~~G-~id~i~sdh~p~~  373 (399)
                         .          ..+..+|++++.| ..++++|||. ++
T Consensus       269 ---~----------~~~~~~~~~~~~G~~~~~lgtD~~-~~  295 (417)
T 2ogj_A          269 ---S----------FSFKVAEAAIARGLLPFSISTDLH-GH  295 (417)
T ss_dssp             ---S----------CCHHHHHHHHHTTCCCSBCCBCBS-TT
T ss_pred             ---c----------ccchHHHHHHHcCCCceEEEcCCC-CC
Confidence               1          1356789999999 9999999997 54

>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*

Probab=99.87  E-value=2.1e-20  Score=184.52  Aligned_cols=183  Identities=16%  Similarity=0.168  Sum_probs=110.7

Q ss_pred             EEEEcc-EEEcCCC----ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC-----
Q 015826           45 YWLTSK-RIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE-----  114 (399)
Q Consensus        45 ~li~n~-~vv~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~-----  114 (399)
                      ++|+|+ .|+++++    ..+++|+|+||||++|++..+.   +++.++||++|++|+|||||+|+|+.+.....     
T Consensus         2 ~li~n~~~v~t~d~~~~~~~~~~v~i~~g~I~~vg~~~~~---~~~~~viD~~g~~v~PG~ID~H~H~~~~~~~g~~~~~   78 (456)
T 3ls9_A            2 ILIRGLTRVITFDDQERELEDADILIDGPKIVAVGKDLSD---RSVSRTIDGRGMIALPGLINSHQHLYEGAMRAIPQLE   78 (456)
T ss_dssp             EEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEESSCCC---TTCSEEEECTTEEEEECEEEEEECGGGGGGBTCGGGS
T ss_pred             EEEEcCcEEEEcCCCCceeccceEEEECCEEEEeCCCCCC---CCCCeEEeCCCCEEecCeeecccccchhhhcccccCC
Confidence            689999 6777664    2589999999999999987432   24678999999999999999999996442210     


Q ss_pred             -------------------------cCchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh---ccCc
Q 015826          115 -------------------------WEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE---KRIY  162 (399)
Q Consensus       115 -------------------------~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~  162 (399)
                                               .++++    .....++++||||+.++. ...+.......++...+...   .+..
T Consensus        79 ~~~l~~~l~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~a~~~~g~r~~  157 (456)
T 3ls9_A           79 RVTMASWLEGVLTRSAGWWRDGKFGPDVIREVARAVLLESLLGGITTVADQH-LFFPGATADSYIDATIEAATDLGIRFH  157 (456)
T ss_dssp             SCCHHHHHHHHHHHHHHHHHTTSSSHHHHHHHHHHHHHHHHHTTEEEEEEEE-CCCCSSSCCTHHHHHHHHHHHHTCEEE
T ss_pred             CCCHHHHHHHhccccccccccccCCHHHHHHHHHHHHHHHHhCCeeEEEecc-ccccCcccchhHHHHHHHHHHcCCEEE
Confidence                                     01111    234557899999999995 22332211122222222222   1211


Q ss_pred             eeEEeeee------eeC-----CChhhHHHHHHHHHc--C---CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 015826          163 VDVGFWGG------LVP-----ENAYNASALEALLNA--G---VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP  226 (399)
Q Consensus       163 ~~~~~~~~------~~~-----~~~~~~~~l~~l~~~--G---~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~  226 (399)
                      +.......      ..+     ...+.+++..++++.  +   ...++..+.+..   .+.++++.++++++.|+++|++
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~  234 (456)
T 3ls9_A          158 AARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCG---VPYDKPELFEAFAQMAADYDVR  234 (456)
T ss_dssp             EEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCC---TTTSCHHHHHHHHHHHHHHTCE
T ss_pred             EEccccccccccccCCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCC---CCCCCHHHHHHHHHHHHHCCCC
Confidence            11111100      000     111233444555431  2   223444444432   2467999999999999999999


Q ss_pred             EEEecCCh
Q 015826          227 LLVHAEME  234 (399)
Q Consensus       227 v~~H~~~~  234 (399)
                      +++|+.+.
T Consensus       235 v~~H~~e~  242 (456)
T 3ls9_A          235 LHTHFYEP  242 (456)
T ss_dssp             EEEEECCT
T ss_pred             EEEEeCCC
Confidence            99998543

>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9

Probab=99.86  E-value=1.8e-21  Score=193.47  Aligned_cols=271  Identities=15%  Similarity=0.053  Sum_probs=155.3

Q ss_pred             cEEEEccEEEcCCC---------------ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccC
Q 015826           44 QYWLTSKRIVTPKG---------------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD  108 (399)
Q Consensus        44 ~~li~n~~vv~~~~---------------~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~  108 (399)
                      .++|++|+|+++.+               ..+++|+|+||||++|++..+.+...++.++||++|++|+|||||+|+|+.
T Consensus         4 ~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~V~I~~G~I~~Vg~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~Hl~   83 (475)
T 2ood_A            4 TTVGIRGTFFDFVDDPWKHIGNEQAAARFHQDGLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIVPGFIDGHIHLP   83 (475)
T ss_dssp             CEEEEEEEEEEESSCGGGSTTCGGGGEEEEEEEEEEEESSBEEEEEEHHHHHHHSTTCEEEEEEEEEEEECEEEEEEEGG
T ss_pred             cceEEEEEEEecCCccccccccCCCcceEEECCEEEEECCEEEEEeChhhhccccCCCeEEeCCCcEEecceecCcccHH
Confidence            45788999998654               247899999999999987432110012458999999999999999999985


Q ss_pred             CCC------CC-----------------CcCch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC
Q 015826          109 DPG------RT-----------------EWEGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI  161 (399)
Q Consensus       109 ~~~------~~-----------------~~e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (399)
                      +..      ..                 +.+++    ...++.++++||||+++++ +.     ..+.++...+.....+
T Consensus        84 ~~~~~g~~~~~~~~~l~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~-~~-----~~~~~~~~~~~~~~~g  157 (475)
T 2ood_A           84 QTRVLGAYGEQLLPWLQKSIYPEEIKYKDRNYAREGVKRFLDALLAAGTTTCQAFT-SS-----SPVATEELFEEASRRN  157 (475)
T ss_dssp             GTTCTTCCSCCHHHHHHHHTHHHHGGGGSHHHHHHHHHHHHHHHHHTTEEEEEEEC-CS-----SHHHHHHHHHHHHHHT
T ss_pred             hHhhcCCCCCCHHHHHHHhccchhhccCCHHHHHHHHHHHHHHHHhcCceEEEEec-cc-----CchhHHHHHHHHHHcC
Confidence            331      10                 11222    2346788999999999986 22     1233333333332211


Q ss_pred             -ceeEEeee-ee-eC-----CChhhHHHHHHHHH--cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc-CCCEEEe
Q 015826          162 -YVDVGFWG-GL-VP-----ENAYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVH  230 (399)
Q Consensus       162 -~~~~~~~~-~~-~~-----~~~~~~~~l~~l~~--~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H  230 (399)
                       .+.++... .. .+     ...+.++++.++++  .+...++..+.+.   ..+.++++.++++++.|+++ |+++++|
T Consensus       158 ~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~e~l~~~~~~a~~~~g~~v~~H  234 (475)
T 2ood_A          158 MRVIAGLTGIDRNAPAEFIDTPENFYRDSKRLIAQYHDKGRNLYAITPR---FAFGASPELLKACQRLKHEHPDCWVNTH  234 (475)
T ss_dssp             CCEEECCEECCSSSCTTTCCCHHHHHHHHHHHHHHHTTBTTEEEEEEEC---BGGGCCHHHHHHHHHHHHHCTTSEEEEE
T ss_pred             CeEEEEeeecccCCCcccccCHHHHHHHHHHHHHHhccCCceEEEEecc---ccCcCCHHHHHHHHHHHHhCCCCcEEEe
Confidence             11111110 00 01     11123344555554  2333455544443   12467899999999999999 9999999


Q ss_pred             cC-ChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHH
Q 015826          231 AE-MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK  309 (399)
Q Consensus       231 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak  309 (399)
                      +. +...........+            ..+          ..+.+.++.+    ..+.+..+.|.... . -+.++.++
T Consensus       235 ~~e~~~~~~~~~~~~g------------~~~----------~~~~~~~~~g----~~~~~~~i~H~~~~-~-~~~i~~~~  286 (475)
T 2ood_A          235 ISENPAECSGVLVEHP------------DCQ----------DYLGVYEKFD----LVGPKFSGGHGVYL-S-NNEFRRMS  286 (475)
T ss_dssp             CSCCHHHHHHHHHHCT------------TCS----------SHHHHHHTTT----CCSTTEEEECCTTC-C-HHHHHHHH
T ss_pred             eCCChHHHHHHHHHcC------------CCc----------cHHHHHHHcC----CCCCCcEEEEeecC-C-HHHHHHHH
Confidence            85 4333322221110            000          0122222221    12455667776543 1 13455555


Q ss_pred             HCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCc--cEEeCCCCCC
Q 015826          310 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHI--DMLSSDHSPT  372 (399)
Q Consensus       310 ~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~i--d~i~sdh~p~  372 (399)
                      +.|  +++.+||++-.    .+   +   ...||         ++++++.|.+  ++++|||.++
T Consensus       287 ~~g--~~~~~~P~~~~----~l---~---~~~~~---------~~~~~~~Gv~~~~~lgTD~~~~  330 (475)
T 2ood_A          287 KKG--AAVVFCPCSNL----FL---G---SGLFR---------LGRATDPEHRVKMSFGTDVGGG  330 (475)
T ss_dssp             HHT--CEEEECHHHHH----HT---T---CCCCC---------HHHHTCTTSCCEEEECCCBTTB
T ss_pred             HcC--CEEEEChhhhh----hc---c---cCcCC---------HHHHHhCCCCCcEEEEccCCCC
Confidence            555  56778886421    01   1   11343         4578899999  9999999874

>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A

Probab=99.85  E-value=3e-21  Score=187.92  Aligned_cols=170  Identities=19%  Similarity=0.179  Sum_probs=104.9

Q ss_pred             EEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC---------
Q 015826           45 YWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---------  113 (399)
Q Consensus        45 ~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~---------  113 (399)
                      ++|+|++|+++++  ..+++|+|+||||++|++..  +    +.+ ||++|++|+|||||+|+|+......         
T Consensus         1 ~li~n~~v~~~~~~~~~~~~v~I~~g~I~~vg~~~--~----~~~-iD~~g~~v~PG~ID~H~H~~~~~~~~~~~~~~~~   73 (406)
T 1p1m_A            1 MIIGNCLILKDFSSEPFWGAVEIENGTIKRVLQGE--V----KVD-LDLSGKLVMPALFNTHTHAPMTLLRGVAEDLSFE   73 (406)
T ss_dssp             CEEEEEEECCSTTSCCEEEEEEEETTEEEEEEESS--C----CCS-EECTTEEEEECEEEEEECGGGGGGTTSSCSCCHH
T ss_pred             CEEEccEEEecCccccccceEEEECCEEEEeeCCC--C----cce-ecCCCcEEeecccchhhccchhhhccccCCCCHH
Confidence            4799999998764  46899999999999999753  1    346 9999999999999999999754210         


Q ss_pred             --------------CcCchHHH----HHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCC
Q 015826          114 --------------EWEGFPSG----TKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN  175 (399)
Q Consensus       114 --------------~~e~~~~~----~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (399)
                                    +.++++..    ...++++||||+++++.       ..+.+.+..+....+......+ .......
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~-------~~~~~~~~~~~~g~r~~~~~~~-~~~~~~~  145 (406)
T 1p1m_A           74 EWLFSKVLPIEDRLTEKMAYYGTILAQMEMARHGIAGFVDMYF-------HEEWIAKAVRDFGMRALLTRGL-VDSNGDD  145 (406)
T ss_dssp             HHHHTTHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEEEEES-------SHHHHHHHHHHHCCEEEEEEEE-CCBTTBC
T ss_pred             HHHHhhhccchhcCCHHHHHHHHHHHHHHHHhcCcEEEEechh-------CHHHHHHHHHHcCCEEEEEccc-ccCCCCH
Confidence                          12223322    25578999999999862       1222222222211111111111 0010112


Q ss_pred             hhhHHHHHHHHH--cCC-cEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015826          176 AYNASALEALLN--AGV-LGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE  232 (399)
Q Consensus       176 ~~~~~~l~~l~~--~G~-~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~  232 (399)
                      .+.+++..++++  .+. ..++..+.+..   ...++++.++++++.|+++|+++++|+.
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~l~~~~~~a~~~g~~v~~H~~  202 (406)
T 1p1m_A          146 GGRLEENLKLYNEWNGFEGRIFVGFGPHS---PYLCSEEYLKRVFDTAKSLNAPVTIHLY  202 (406)
T ss_dssp             TTHHHHHHHHHHHHTTGGGTEEEEEEECC---TTTSCHHHHHHHHHHHHHTTCCEEEEES
T ss_pred             HHHHHHHHHHHHHhhCCCCcEEEEEecCc---cCcCCHHHHHHHHHHHHHCCCcEEEEcC
Confidence            223333333332  222 23555444331   1246889999999999999999999985

>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*

Probab=99.85  E-value=7.8e-20  Score=178.51  Aligned_cols=184  Identities=18%  Similarity=0.146  Sum_probs=108.3

Q ss_pred             ccEEEEccEEEcCCC-----c--eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC--
Q 015826           43 NQYWLTSKRIVTPKG-----V--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT--  113 (399)
Q Consensus        43 ~~~li~n~~vv~~~~-----~--~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~--  113 (399)
                      ++++|+|++|+++++     .  .+++|+|+||||++||+..+.+.. .+.++||++|++|+|||||+|+|+...+..  
T Consensus         5 ~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~-~~~~viD~~G~~v~PG~ID~H~H~~~~~~~~~   83 (416)
T 2q09_A            5 CERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGP-YPAHWQDMKGKLVTPGLIDCHTHLIFAGSRAE   83 (416)
T ss_dssp             CSEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC---CCTTSEECTTCEEEECEEEEEECCCCCSCCHH
T ss_pred             ccEEEEcCeEeccCcccccccccccceEEEECCEEEEEcChhhcccc-CCCeEEeCCCCEECCcccccccCcchhhhhHH
Confidence            578999999998765     1  468999999999999975432210 135799999999999999999999765431  


Q ss_pred             -------------------------------CcCchHH----HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh
Q 015826          114 -------------------------------EWEGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE  158 (399)
Q Consensus       114 -------------------------------~~e~~~~----~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~  158 (399)
                                                     +.+++..    ..+.++++||||+.++.....+.......++...+...
T Consensus        84 ~~~~~~~g~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~~~~~~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~  163 (416)
T 2q09_A           84 EFELRQKGVPYAEIARKGGGIISTVRATRAASEDQLFELALPRVKSLIREGVTTVEIKSGYGLTLEDELKMLRVARRLGE  163 (416)
T ss_dssp             HHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHTEEEEEEECCSCCSHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHhcCCHHHhhhcCCcEeehhhhccCCCHHHHHHHHHHHHHHHHHcCCcEEEeccCcccChHhHHHHHHHHHHHHh
Confidence                                           1112222    24678899999999875111110011122333222221


Q ss_pred             c-cCceeEEeeee--eeCC----ChhhHHH-----HHHHHHcC-CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCC
Q 015826          159 K-RIYVDVGFWGG--LVPE----NAYNASA-----LEALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR  225 (399)
Q Consensus       159 ~-~~~~~~~~~~~--~~~~----~~~~~~~-----l~~l~~~G-~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~  225 (399)
                      . ...+.....+.  +...    ..+..+.     +++....| +..++.+..      .+.++.++++++++.|+++|+
T Consensus       164 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~a~~~g~  237 (416)
T 2q09_A          164 ALPIRVKTTLLAAHAVPPEYRDDPDSWVETICQEIIPAAAEAGLADAVDVFCE------HIGFSLAQTEQVYLAADQYGL  237 (416)
T ss_dssp             HSSSEEEEEEEEETSCCGGGTTCHHHHHHHHHHTHHHHHHHTTCCSEEEEBBS------TTSBCHHHHHHHHHHHHHTTC
T ss_pred             hCCceEEEeeeccccCCccccCCHHHHHHHHHhhhhHHHHhcccccccccccC------CCcCCHHHHHHHHHHHHHCCC
Confidence            1 11111111111  1110    0111111     12222333 444443321      124688999999999999999


Q ss_pred             CEEEecCC
Q 015826          226 PLLVHAEM  233 (399)
Q Consensus       226 ~v~~H~~~  233 (399)
                      ++.+|+..
T Consensus       238 ~v~~H~~~  245 (416)
T 2q09_A          238 AVKGHMDQ  245 (416)
T ss_dssp             EEEEEESS
T ss_pred             cEEEEECC
Confidence            99999854

>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}

Probab=99.84  E-value=5.8e-21  Score=185.34  Aligned_cols=178  Identities=15%  Similarity=0.141  Sum_probs=114.9

Q ss_pred             ccEEEEccEEEcCCCc-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCC-CCEEecceeecccccCCC---CCCCcCc
Q 015826           43 NQYWLTSKRIVTPKGV-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYG-EAVIMPGLIDVHAHLDDP---GRTEWEG  117 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~-G~~vlPGlID~H~H~~~~---~~~~~e~  117 (399)
                      ++++|+|++|+++++. .+++|+|+||||++|++..+..   ++.++||++ |++|+|||||+|+|+..+   ...++++
T Consensus         3 ~~~li~~~~v~~~~~~~~~~~v~I~~g~I~~ig~~~~~~---~~~~viD~~~g~~v~PGlID~H~H~~~~~~~~~~~~e~   79 (396)
T 2vhl_A            3 ESLLIKDIAIVTENEVIKNGYVGINDGKISTVSTERPKE---PYSKEIQAPADSVLLPGMIDIHIHGGYGADTMDASFST   79 (396)
T ss_dssp             CCEEEEEEEEECSSCEEEEEEEEEETTEEEEEESSCCSS---CCSEEEECCTTCEEEECEEEEEECEETTEEGGGCSHHH
T ss_pred             ccEEEEeeEEEcCCccccCceEEEECCEEEEEECCCCCC---CCCceEcCCCCCEEcCCEEEEeecCCcCccccCCCHHH
Confidence            4789999999998875 4799999999999998321111   245799999 999999999999999765   2335566


Q ss_pred             hHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc-c----CceeEEeee--eee-C-----CC-----hhhH
Q 015826          118 FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-R----IYVDVGFWG--GLV-P-----EN-----AYNA  179 (399)
Q Consensus       118 ~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~--~~~-~-----~~-----~~~~  179 (399)
                      ++..+++++++||||++|++ ++.+.......++...+.... .    +...++++.  .+. +     ..     ....
T Consensus        80 ~~~~~~~~l~~GvTtv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  158 (396)
T 2vhl_A           80 LDIMSSRLPEEGTTSFLATT-ITQEHGNISQALVNAREWKAAEESSLLGAELLGIHLEGPFVSPKRAGAQPKEWIRPSDV  158 (396)
T ss_dssp             HHHHHHHGGGGTEEEEEEEC-CSCCHHHHHHHHHHHHHHHHHCSGGGSSSEEEEEEEECSSSCGGGCTTSCGGGCCCCCH
T ss_pred             HHHHHHHHHcCCeeEEEecc-cCCCHHHHHHHHHHHHHHHhcccccccccceEEEeeecCccCccccCCCCHHHccCCCH
Confidence            77788999999999999998 332221111223333333321 2    121233321  110 0     00     0135


Q ss_pred             HHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEE-ecC
Q 015826          180 SALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV-HAE  232 (399)
Q Consensus       180 ~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~-H~~  232 (399)
                      +.++++.+.+...+|.+...+.   .+     .+.++++.|+++|+++.+ |+.
T Consensus       159 ~~~~~~~~~~~~~ik~~~~~p~---~~-----~~~~~~~~a~~~g~~v~~gH~~  204 (396)
T 2vhl_A          159 ELFKKWQQEAGGLIKIVTLAPE---ED-----QHFELIRHLKDESIIASMGHTD  204 (396)
T ss_dssp             HHHHHHHHHTTTCEEEEEECGG---GS-----GGGHHHHHHHHTTCEEEECSBC
T ss_pred             HHHHHHHHhcCCcceEEEECCC---CC-----CHHHHHHHHHHCCCEEeecccC
Confidence            6677777777666775432211   11     123567889999999998 985

>4ep8_C Urease subunit alpha; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1ef2_A* 4epb_C* 4epd_C* 4epe_C* 1ejx_C* 1ejw_C* 1fwj_C* 1kra_C 2kau_C* 1a5k_C 1ejv_C* 1ejt_C* 1eju_C* 1ejs_C* 1a5m_C 1a5n_C 1ejr_C* 1a5l_C 1a5o_C 1fwa_C* ...

Probab=99.83  E-value=5.5e-22  Score=201.43  Aligned_cols=287  Identities=17%  Similarity=0.129  Sum_probs=162.3

Q ss_pred             CCccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCC-------CCCCCCcEEeCCCCEEecceeecccccCCCCCC
Q 015826           41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWP-------RNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT  113 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~-------~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~  113 (399)
                      ...|++|+|++|+|++++.++||+|+||||++||+.....       ..+++.++||++|++|+|||||+|+|+.+++..
T Consensus        63 ~~~DlvI~Na~Ivd~~Gi~kaDIlIkDGrIaaIG~ag~pd~~d~vdl~~~~g~eVIDA~GkiV~PG~ID~HvH~~~~~~~  142 (566)
T 4ep8_C           63 DCVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGGIDTHIHWICPQQA  142 (566)
T ss_dssp             GSCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECEEEEEEECSCTTHH
T ss_pred             CCCCEEEECcEEECCCCeEEeEEEEECCEEEEeecCCCcccccccccccCCCCEEEECCCCEEEcCEEEecccccCCCcc
Confidence            4579999999999999988999999999999999742110       012478999999999999999999999876432


Q ss_pred             CcCchHHHHHHHHcCCeeeeec---------CcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHH
Q 015826          114 EWEGFPSGTKAAAAGGITTLID---------MPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEA  184 (399)
Q Consensus       114 ~~e~~~~~~~~al~~GvTtv~d---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  184 (399)
                      .         .+...+.++...         ++ ++  ........... ........+++++++......   ......
T Consensus       143 ~---------~a~~~~~~~~~~~~~~~~~~~~~-~~--~t~~~~~~~~~-~~a~~~~~~~~~~~~~~~~~~---~~~~~~  206 (566)
T 4ep8_C          143 E---------EALVSGVTTMVGGGTGPAAGTHA-TT--CTPGPWYISRM-LQAADSLPVNIGLLGKGNVSQ---PDALRE  206 (566)
T ss_dssp             H---------HHHHHTEEEEEEECSSSSHHHHH-CC--CCCHHHHHHHH-HHHHTTSSSEEEEEEECCCSC---HHHHHH
T ss_pred             c---------hhhhhhHHHHhhCceEEEEecCC-CC--CchHHHHHHHH-HHhccccceeeeeeccccccc---chhhHH
Confidence            1         122223333322         22 11  11112222222 233345567887776554333   345566


Q ss_pred             HHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch---hHHhhccCcCCchhhhcCCCCCC
Q 015826          185 LLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRSYSTYLKTRP  261 (399)
Q Consensus       185 l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p  261 (399)
                      +...++.+++.+...       ......+......+..++....+|.+......   .......   + .....+....+
T Consensus       207 ~~~a~~~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~e~~~~~~~---~-~~~~~~~~~~~  275 (566)
T 4ep8_C          207 QVAAGVIGLKIHEDW-------GATPAAIDCALTVADEMDIQVALHSDTLNESGFVEDTLAAIG---G-RTIHTFHTEGA  275 (566)
T ss_dssp             HHHHTCSEEEEEGGG-------CCCHHHHHHHHHHHHHHTCEEEEECCTTCSSCCHHHHHHHHT---T-CCEEETTTTST
T ss_pred             Hhhhccccccccccc-------cccchhhhhHhHHHHHhcchhhhhhhhHHHHHHHHhhHhhcc---C-ccccccccccc
Confidence            667788888876543       24567778888888999999999987655421   1111111   0 00011111222


Q ss_pred             hHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEc
Q 015826          262 PSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCA  341 (399)
Q Consensus       262 ~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~  341 (399)
                      ...+...+.+....+...       ..+.+..|.+.. ..++....         ..++.||+.++.....   ...+..
T Consensus       276 ~~~~~~~~~~~~~~a~~~-------~~~~~~~~~~~~-~~~~e~~~---------~~~~~h~l~~~~~~~~---~~~~~~  335 (566)
T 4ep8_C          276 GGGHAPDIITACAHPNIL-------PSSTNPTLPYTL-NTIDEHLD---------MLMVCHHLDPDIAEDV---AFAESR  335 (566)
T ss_dssp             TSSSTTTGGGGGGCTTEE-------EEECSTTSSCBT-THHHHHHH---------HHHHHHTCCTTCHHHH---HHHHHH
T ss_pred             hhHHHHHHHHHHHHHhhc-------CCceeehhHHHH-HHhhcccc---------eEEEeecccCChhhHH---hhccCC
Confidence            222222222222222211       222333344443 33322211         1245677766543211   111222


Q ss_pred             CCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccc
Q 015826          342 PPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK  377 (399)
Q Consensus       342 Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k  377 (399)
                      ++   .+.....+..+..|.+++++|||+++....+
T Consensus       336 ~~---~~~~~~~~~l~~~G~~~~i~sD~~~~~~~~~  368 (566)
T 4ep8_C          336 IR---RETIAAEDVLHDLGAFSLTSSDSQAMGRVGE  368 (566)
T ss_dssp             CC---HHHHHHHHHHHHHTSSCEECCCTTSSSCTTC
T ss_pred             Cc---ccchHHHHHHHhCCCcceEeecccccccccc
Confidence            22   2344556666778999999999999986554

>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A

Probab=99.83  E-value=3e-19  Score=181.69  Aligned_cols=180  Identities=20%  Similarity=0.236  Sum_probs=128.4

Q ss_pred             CCccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCch
Q 015826           41 PYNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEGF  118 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~~  118 (399)
                      .+++++|+|++|+++..  ..+++|+|+||||++|++....   +++.++||++|++|+|||||+|+|+..+.    .+.
T Consensus        33 ~~~dlli~n~~ivd~~~~~~~~~dI~I~~G~I~~Vg~~~~~---~~~~~vID~~G~~v~PG~ID~H~Hl~~~~----~~~  105 (608)
T 3nqb_A           33 QRFDVLITGGTLVDVVTGELRPADIGIVGALIASVHEPASR---RDAAQVIDAGGAYVSPGLIDTHMHIESSM----ITP  105 (608)
T ss_dssp             SCEEEEEESCEEECTTTCCEEECEEEEETTEEEEEECTTSC---CCEEEEEECTTSEEEECEEEEEECGGGGT----SCH
T ss_pred             CCCCEEEECeEEEECCCCeEEeeEEEEECCEEEEecCCCCC---CCCCeEEeCCCCEEecCeEecccCccccc----CCH
Confidence            34689999999999864  4688999999999999975421   23567999999999999999999997543    234


Q ss_pred             HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeee-eeeCC--------ChhhHHHHHHHHH-c
Q 015826          119 PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG-GLVPE--------NAYNASALEALLN-A  188 (399)
Q Consensus       119 ~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--------~~~~~~~l~~l~~-~  188 (399)
                      ....+.++.+||||+++++ ++.+.....+.++..++..... ..++.+.. +..+.        .....++++++.+ .
T Consensus       106 ~~~~~~al~~GvTtvv~~p-~~~~~v~g~~~~~~~l~~a~~~-~~~v~~~~p~~~P~~~~~~~~g~~~~~~el~~l~~~~  183 (608)
T 3nqb_A          106 AAYAAAVVARGVTTIVWDP-HEFGNVHGVDGVRWAAKAIENL-PLRAILLAPSCVPSAPGLERGGADFDAAILADLLSWP  183 (608)
T ss_dssp             HHHHHHHHTTTEEEEEECC-HHHHHHHTHHHHHHHHHHHTTC-SSEEEEEECCCSSSSTTSCCCSCCCCHHHHHHHHTST
T ss_pred             HHHHHHHHhCCeEEEEcCC-ccccccCCHHHHHHHHHHhhhc-CcEEEEeccccCCCCCccccCcccCCHHHHHHHHhcc
Confidence            5667889999999999887 3333223345566555555432 23444333 22221        1123567888876 5


Q ss_pred             CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          189 GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       189 G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ++.+++.++.+++    ...+++++.+.++.|+++|+++.+|++.
T Consensus       184 ~v~glgE~~~~~~----v~~~d~~l~~~l~~A~~~g~pV~~Ha~~  224 (608)
T 3nqb_A          184 EIGGIAEIMNMRG----VIERDPRMSGIVQAGLAAEKLVCGHARG  224 (608)
T ss_dssp             TEEEEEEECCHHH----HHTTCHHHHHHHHHHHHHTCEEEECCTT
T ss_pred             CcceeeEeeccCC----cCCCcHHHHHHHHHHHHcCCEEEEcCCC
Confidence            8888887764431    1245678999999999999999999975

>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A

Probab=99.81  E-value=1.9e-18  Score=171.71  Aligned_cols=188  Identities=14%  Similarity=0.144  Sum_probs=109.8

Q ss_pred             CCCccEEEEccEEEcCCC-----ceeeEEEEEC-CEEEEeccCCCC-----CCCCCCCcEEeC-CCCEEecceeeccccc
Q 015826           40 LPYNQYWLTSKRIVTPKG-----VISGAVEIKE-GNIISIVSEEDW-----PRNSKTGQVVDY-GEAVIMPGLIDVHAHL  107 (399)
Q Consensus        40 ~~~~~~li~n~~vv~~~~-----~~~~~V~I~d-G~I~~Ig~~~~~-----~~~~~~~~vID~-~G~~vlPGlID~H~H~  107 (399)
                      .++.+++|+|..|.++..     ..+++|+|+| |||++|++..+.     ....++.++||+ +|++|||||||+|+|+
T Consensus        28 ~~~~~~~~~g~~i~~~~~~~~~~~~~~~v~I~~~g~I~~vg~~~~~~~~~~~~~~~~~~viD~~~g~~v~PG~ID~H~H~  107 (476)
T 4aql_A           28 MPPLAHIFRGTFVHSTWTCPMEVLRDHLLGVSDSGKIVFLEEASQQEKLAKEWCFKPCEIRELSHHEFFMPGLVDTHIHA  107 (476)
T ss_dssp             ---CCEEEEEEEEECCSSCSCEEEEEEEEEECTTSBEEEEEEGGGHHHHHHHTTCCGGGCEECCTTCEEEECEEEEEEEG
T ss_pred             CCCccEEEEccEEecCCCCceeEecCcEEEEecCCeEEEecCcchhhhhhhhccCCCceEEEcCCCCEEeCCeeccccch
Confidence            345789999999986533     2589999998 999999976321     001134679995 5899999999999998


Q ss_pred             CCCCCCC---------c--------------Cc----hHH-HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh-
Q 015826          108 DDPGRTE---------W--------------EG----FPS-GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE-  158 (399)
Q Consensus       108 ~~~~~~~---------~--------------e~----~~~-~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~-  158 (399)
                      .+..+..         |              ++    .+. ...+++++||||+.++. ..     ..+......+... 
T Consensus       108 ~~~~~rg~~~d~~l~~wL~~~~~p~e~~~~~~~~~~~~~~~~~~e~l~~G~Tt~~~~~-~~-----~~~~~~~~~~a~~~  181 (476)
T 4aql_A          108 SQYSFAGSSIDLPLLEWLTKYTFPAEHRFQNIDFAEEVYTRVVRRTLKNGTTTACYFA-TI-----HTDSSLLLADITDK  181 (476)
T ss_dssp             GGGGGTTSCCCSCHHHHHHHTHHHHHHGGGSHHHHHHHHHHHHHHHHHTTEEEEEEEC-CS-----CHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhcCCCHHHHHHHhhhhHHHhcCCHHHHHHHHHHHHHHHHHCCeeEEEEec-cc-----CchHHHHHHHHHHH
Confidence            5431110         0              11    122 23578999999999775 11     1222222222221 


Q ss_pred             --ccCceeEEeeee------eeCCChhhHHHHHHHHH----cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCC
Q 015826          159 --KRIYVDVGFWGG------LVPENAYNASALEALLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP  226 (399)
Q Consensus       159 --~~~~~~~~~~~~------~~~~~~~~~~~l~~l~~----~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~  226 (399)
                        .+..+.......      +.....+.+++.+++++    .+...++..+.+.   ..+.++++.++++++.|+++|++
T Consensus       182 ~G~r~~~~~~~~d~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~~~v~~~l~p~---~~~~~s~e~l~~~~~~A~~~g~~  258 (476)
T 4aql_A          182 FGQRAFVGKVCMDLNDTFPEYKETTEESIKETERFVSEMLQKNYSRVKPIVTPR---FSLSCSETLMGELGNIAKTRDLH  258 (476)
T ss_dssp             HTCEEEEECEECSCCSSCTTSCCCHHHHHHHHHHHHHHHHHHTCSSEEECBEEC---CTTTSCHHHHHHHHHHHHHTTCC
T ss_pred             hCCEEEEeeccccCCCCCcccccCHHHHHHHHHHHHHHHhcCCCCceEEEEeCC---cCCcCCHHHHHHHHHHHHHcCCc
Confidence              121111111000      00011123344444432    2333456655553   23467999999999999999999


Q ss_pred             EEEec-CChhh
Q 015826          227 LLVHA-EMEKG  236 (399)
Q Consensus       227 v~~H~-~~~~~  236 (399)
                      +++|+ ++...
T Consensus       259 v~~H~~e~~~e  269 (476)
T 4aql_A          259 IQSHISENRDE  269 (476)
T ss_dssp             EEEEESCSHHH
T ss_pred             eEEEecCCHHH
Confidence            99997 44443

>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A

Probab=99.79  E-value=1.7e-17  Score=161.97  Aligned_cols=70  Identities=26%  Similarity=0.358  Sum_probs=54.6

Q ss_pred             CccEEEEccEEEcCCC-----c--eeeEEEEECCEEEEeccCCCCCCC-CCCCcEEeCCCCEEecceeecccccCCCC
Q 015826           42 YNQYWLTSKRIVTPKG-----V--ISGAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHLDDPG  111 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~-----~--~~~~V~I~dG~I~~Ig~~~~~~~~-~~~~~vID~~G~~vlPGlID~H~H~~~~~  111 (399)
                      +++++|+|++++++++     .  .+++|+|+||||++||+..+.+.. .++.++||++|++|+|||||+|+|+...+
T Consensus        14 ~~~~li~n~~i~t~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~~~~~~~~viD~~G~~v~PG~ID~H~H~~~~~   91 (419)
T 2puz_A           14 NATALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITPALIDCHTHLVFGG   91 (419)
T ss_dssp             -CEEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEEECEEECCCCCCCSS
T ss_pred             CCcEEEECCeEeccCcccccCCcccceEEEEECCEEEEEcChhhhhhhccCCCeEEeCCCCEeCcCceecccCccchh
Confidence            3589999999998754     2  478999999999999976433210 01257999999999999999999997543

>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}

Probab=99.78  E-value=2.3e-18  Score=168.74  Aligned_cols=177  Identities=15%  Similarity=0.156  Sum_probs=108.1

Q ss_pred             EEEEccEEEcCCCc-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC---c-----
Q 015826           45 YWLTSKRIVTPKGV-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---W-----  115 (399)
Q Consensus        45 ~li~n~~vv~~~~~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~---~-----  115 (399)
                      ++|+|++|+++++. .+++|+| ||||++||+..+.+..+++.++||++|++|+|||||+|+|+.+..+..   .     
T Consensus         2 ~~i~~~~v~~~~~~~~~~~v~i-~g~I~~Vg~~~~~~~~~~~~~vid~~g~~v~PGlId~H~H~~~~~~rg~~~~~~l~~   80 (427)
T 3v7p_A            2 RIIKPFAILTPQTIIQDKAVAF-DKKIEAIDTVENLIKKYPNAAVEHDENSLLLPGFANPHLHLEFSANKATLQYGDFIP   80 (427)
T ss_dssp             EEEEEEEEECSSSEEESCEEEE-SSBEEEEECHHHHHHHCTTSEEEEEEEEEEEECEEEEEECGGGTTCSSCSCCSSHHH
T ss_pred             EEEECCEEEcCCCEEeCcEEEE-CCEEEEecChhhhccccCCceEEeCCCCEEecCEeecccCcchhhcccccccCCHHH
Confidence            57999999998874 4799999 999999997543221123568999999999999999999997654321   0     


Q ss_pred             --------------Cch----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCCh-
Q 015826          116 --------------EGF----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA-  176 (399)
Q Consensus       116 --------------e~~----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  176 (399)
                                    ++.    .....+++++||||+.|+.. . +  ..   ++.. +..  ..  ...+......... 
T Consensus        81 wl~~~~~~~~~~~~~~~~~~~~~~~~e~l~~GvTtv~d~~~-~-~--~~---~~a~-~~~--Gi--r~~~~~~~~~~~~~  148 (427)
T 3v7p_A           81 WLYSVIRHREDLLPLCDGACLEQTLSSIIQTGTTAIGAISS-Y-G--ED---LQAC-IDS--AL--KVVYFNEVIGSNAA  148 (427)
T ss_dssp             HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHTTEEEEEEEES-S-S--TT---HHHH-HHB--SS--EEEEEEEECBCCGG
T ss_pred             HHHHHHHhHHhcCHHHHHHHHHHHHHHHHHhCCEEEEEecC-c-H--HH---HHHH-Hhc--CC--eEEEeccccCCChh
Confidence                          111    12344688999999999862 1 1  11   1111 111  11  1111111111111 


Q ss_pred             ---hhHHH----HHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhhc
Q 015826          177 ---YNASA----LEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKGS  237 (399)
Q Consensus       177 ---~~~~~----l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~~  237 (399)
                         +..++    ++.....+...++..+.++.   ...++++.++++++.|+++|+++++|+ |+....
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~s~e~l~~~~~~A~~~g~~v~~H~~E~~~e~  214 (427)
T 3v7p_A          149 TADVMYASFLERFHQSKKHENERFKAAVAIHS---PYSVHYILAKRALDIAKKYGSLVSVHFMESRAER  214 (427)
T ss_dssp             GHHHHHHHHHHHHHHHHTTCBTTEEEEEEECC---TTTBCHHHHHHHHHHHHHHTCCEEEEESCSHHHH
T ss_pred             hhhHHHHHHHHHHHHhhhccCCceEEEEecCC---CCcCCHHHHHHHHHHHHhCCCCEEEEeCCCHHHH
Confidence               11122    22221222223454444432   235789999999999999999999996 555443

>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A

Probab=99.77  E-value=2.6e-17  Score=160.81  Aligned_cols=182  Identities=18%  Similarity=0.163  Sum_probs=103.3

Q ss_pred             ccEEEEc-cEEEcCCC--------------ceeeEEEEECCEEEEeccCC-CCCCCCCCCcEEeCCCCEEecceeecccc
Q 015826           43 NQYWLTS-KRIVTPKG--------------VISGAVEIKEGNIISIVSEE-DWPRNSKTGQVVDYGEAVIMPGLIDVHAH  106 (399)
Q Consensus        43 ~~~li~n-~~vv~~~~--------------~~~~~V~I~dG~I~~Ig~~~-~~~~~~~~~~vID~~G~~vlPGlID~H~H  106 (399)
                      ++++|+| ++|+++++              ..+++|+|+||||++||+.. ...  .+..++||++|++|+|||||+|+|
T Consensus         5 ~d~li~n~g~I~t~~~~~~~~~~~~~~~~~~~~~~v~I~~g~I~~vg~~~~~~~--~~~~~viD~~G~~v~PGfID~H~H   82 (421)
T 2bb0_A            5 IDTILINIGQLLTMESSGPRAGKSMQDLHVIEDAVVGIHEQKIVFAGQKGAEAG--YEADEIIDCSGRLVTPGLVDPHTH   82 (421)
T ss_dssp             EEEEEEEEEEECCCCCSSCCCGGGGTCCCCEEEEEEEEETTEEEEEEETTTTTT--CEEEEEEECTTCEEEECEEECCBC
T ss_pred             ccEEEECCcEEEecCCCccccccccccccccccceEEEECCEEEEEeccccccc--CCCCeEEeCCCCEeccCeeccCcC
Confidence            4789999 99997653              24789999999999999753 200  013479999999999999999999


Q ss_pred             cCCCCCCC---------------------------------cCchH----HHHHHHHcCCeeeeecCcCCCCCCCCcHHH
Q 015826          107 LDDPGRTE---------------------------------WEGFP----SGTKAAAAGGITTLIDMPLNSDPSTISTET  149 (399)
Q Consensus       107 ~~~~~~~~---------------------------------~e~~~----~~~~~al~~GvTtv~d~~~~~~~~~~~~~~  149 (399)
                      +...+...                                 .+++.    ...+.+++.||||+.++.............
T Consensus        83 ~~~~~~~~~~~~~~~~g~~~~~~~~~gggi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~  162 (421)
T 2bb0_A           83 LVFGGSREKEMNLKLQGISYLDILAQGGGILSTVKDTRAASEEELLQKAHFHLQRMLSYGTTTAEVKSGYGLEKETELKQ  162 (421)
T ss_dssp             CCCCSCCGGGHHHHHTTCCHHHHHHTTCTHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTTEEEEEEECCSCCSHHHHHHH
T ss_pred             ccccccchHHHHHHHhCCCHHHHhhcCCCcccchhhhhcCCHHHHHHHHHHHHHHHHhcCceEEEeccccCcCccchHHH
Confidence            97543211                                 01111    123677899999998853111100000112


Q ss_pred             HHHHHHHHhc-cCceeEEeeee--eeCC---C-hhhHHHH----HHHHHcC-CcEEEEeecCCCCCCCCCCCHHHHHHHH
Q 015826          150 LKLKVDAAEK-RIYVDVGFWGG--LVPE---N-AYNASAL----EALLNAG-VLGLKSFMCPSGINDFPMTNASHIKEGL  217 (399)
Q Consensus       150 ~~~~~~~~~~-~~~~~~~~~~~--~~~~---~-~~~~~~l----~~l~~~G-~~~ik~~~~~~~~~~~~~~~~~~l~~~~  217 (399)
                      ++...+.... ...+.....+.  ....   . .+..+.+    +.....+ +..++.+. .     ...++.+++++++
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~e~l~~~~  236 (421)
T 2bb0_A          163 LRVAKKLHESQPVDLVSTFMGAHAIPPEYQNDPDDFLDQMLSLLPEIKEQELASFADIFT-E-----TGVFTVSQSRRYL  236 (421)
T ss_dssp             HHHHHHHHHHSSSEEEEEEEEESSCCGGGTTCHHHHHHHHHTTHHHHHHTTCCSEEEEBB-C-----TTSBCHHHHHHHH
T ss_pred             HHHHHHHHhhcCceEEEEeeccccCChhhcccHHHHHHHHHHhhHHhhccCccccccccC-C-----cCCCCHHHHHHHH
Confidence            2222221111 11111111111  1110   0 1111211    1122223 33444332 1     1246889999999


Q ss_pred             HHHHhcCCCEEEecC
Q 015826          218 SVLARYKRPLLVHAE  232 (399)
Q Consensus       218 ~~a~~~g~~v~~H~~  232 (399)
                      +.|+++|+++.+|+.
T Consensus       237 ~~a~~~g~~v~~H~~  251 (421)
T 2bb0_A          237 QKAAEAGFGLKIHAD  251 (421)
T ss_dssp             HHHHHTTCEEEEEEC
T ss_pred             HHHHHCCCCEEEEec
Confidence            999999999999974

>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*

Probab=99.74  E-value=6.8e-18  Score=162.90  Aligned_cols=184  Identities=18%  Similarity=0.145  Sum_probs=114.1

Q ss_pred             EEEEccEEEcCCCc-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC-CC------CcC
Q 015826           45 YWLTSKRIVTPKGV-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RT------EWE  116 (399)
Q Consensus        45 ~li~n~~vv~~~~~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~~------~~e  116 (399)
                      ++|+|++|+++++. .+++|+|+||||++|++..+.+   .+.++||++|++|+|||||+|+|+.... +.      +.+
T Consensus         2 ~li~~~~v~~~~~~~~~~~v~I~~g~I~~vg~~~~~~---~~~~viD~~g~~v~PGlID~H~H~~~g~~~~~~~~~~~~~   78 (382)
T 1yrr_A            2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELP---PEIEQRSLNGAILSPGFIDVQLNGCGGVQFNDTAEAVSVE   78 (382)
T ss_dssp             EEEESSEEECSSCEESSEEEEEETTEEEEEEEGGGSC---TTCCEEECTTCEEEECEEEEEESEETTEESSSSTTTSSHH
T ss_pred             EEEEeeEEEcCCceeeCCEEEEECCEEEEEecCCCCC---ccceeecCCCCEEccCEEEEeecccCCcCccccccCCCHH
Confidence            57999999998774 3689999999999998754322   2457999999999999999999975421 11      224


Q ss_pred             chHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh--ccCceeEEeeeee-eCC-----Ch-----hhHHHHH
Q 015826          117 GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE--KRIYVDVGFWGGL-VPE-----NA-----YNASALE  183 (399)
Q Consensus       117 ~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~-----~~-----~~~~~l~  183 (399)
                      +++..++.++++||||++++. .+.+.....+.+....+...  +.....+...+.+ .+.     ..     ...+.++
T Consensus        79 ~~~~~~~~~l~~GvTtv~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~g~~~~~~~~g~~~~~~~~~~~~~~~~  157 (382)
T 1yrr_A           79 TLEIMQKANEKSGCTNYLPTL-ITTSDELMKQGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVD  157 (382)
T ss_dssp             HHHHHHHHHHHTTEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHCTTSBCCEEEECSSCCCSCC-CCCSCSCCHHHHHHHH
T ss_pred             HHHHHHHHHHhCCeEEEEeec-CCCCHHHHHHHHHHHHHHhhccCCceeEEEEeCCcCCccccCCCCHHHccCCCHHHHH
Confidence            455677889999999999986 33221111112222222222  1112222111111 110     00     1134555


Q ss_pred             HHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEE-ecC-ChhhchhHHh
Q 015826          184 ALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV-HAE-MEKGSERHVK  242 (399)
Q Consensus       184 ~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~-H~~-~~~~~~~~~~  242 (399)
                       +.+.|...+|.+...         ..+.+.++++.|+++|+++++ |+. +.+.+...+.
T Consensus       158 -~~~~~~~~ik~~~~~---------~~~~~~~~~~~a~~~g~~v~~gH~~~~~~~~~~~~~  208 (382)
T 1yrr_A          158 -FLCENADVITKVTLA---------PEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFR  208 (382)
T ss_dssp             -HHHHTTTTEEEEEEC---------GGGSCHHHHHHHHHTTCEEEECSCCCCHHHHHHHHH
T ss_pred             -HHHhcCCCEEEEEEC---------CCCChHHHHHHHHHCCCEEEEECCCCCHHHHHHHHH
Confidence             667777778764211         113445788999999999998 986 5555544443

>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}

Probab=99.74  E-value=5.1e-18  Score=164.62  Aligned_cols=92  Identities=17%  Similarity=0.305  Sum_probs=72.0

Q ss_pred             CccEEEEccEEEcCCC-ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCc-----
Q 015826           42 YNQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEW-----  115 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~-----  115 (399)
                      +++++|+|++|+++++ ...++|+|+||||++|++..+ +   ++.++||++|++|+|||||+|+|+........     
T Consensus         4 ~~~~~i~~~~i~~~~~~~~~~~v~i~~g~I~~i~~~~~-~---~~~~~id~~g~~~~Pg~~d~h~h~~~~~~~~~~~~~~   79 (396)
T 3ooq_A            4 SVKILFKNATVFPITSRPFKGDVLVSNGKVEKVGENIE-D---PDAEIVDLTGKFLFPGFVDAHSHIGLFEEGVGYYYSD   79 (396)
T ss_dssp             --CEEEEEEEECCSSSCCEEEEEEEETTEEEEEESCCC-C---TTSEEEECTTCEEEECEEEEEECTTTSCTTSCGGGCC
T ss_pred             cceEEEECcEEEeCCCCeEEeEEEEECCEEEEecCCCC-C---CCCeEEECCCCEEecCEEecccccCccccCccccccc
Confidence            3578999999999876 345999999999999998654 2   36789999999999999999999976422100     


Q ss_pred             --------------Cch----HHHHHHHHcCCeeeeecCc
Q 015826          116 --------------EGF----PSGTKAAAAGGITTLIDMP  137 (399)
Q Consensus       116 --------------e~~----~~~~~~al~~GvTtv~d~~  137 (399)
                                    .+.    ......++++||||+++++
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GvTtv~~~~  119 (396)
T 3ooq_A           80 GNEATDPVTPHVKALDGFNPQDPAIERALAGGVTSVMIVP  119 (396)
T ss_dssp             SCCTTCSBCTTCBGGGGCCTTCHHHHHHHTTTEEEEEECC
T ss_pred             cccccCccCccccHhhhcCcCcHHHHHHHhCCeEEEeccC
Confidence                          011    1457889999999999997

>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}

Probab=99.73  E-value=6.4e-17  Score=159.83  Aligned_cols=183  Identities=17%  Similarity=0.157  Sum_probs=102.5

Q ss_pred             CCccEEEEccEEEcCCC-ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC------
Q 015826           41 PYNQYWLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT------  113 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~------  113 (399)
                      +|++++++|+.+.  ++ ..+++|+|+||||++|++..+       .++||++|++|+|||||+|+|+.+..+.      
T Consensus        10 ~m~~l~~~~~~~~--~~~~~~~~v~I~~g~I~~Ig~~~~-------~~~iD~~g~~v~PGlID~H~H~~~~~~rg~~~~~   80 (458)
T 4f0l_A           10 SQHFIHARQALLP--DGWAENVRIGIAGGVICSIETGVL-------AGPDDERQSVVVAGMANLHSHAFQYGMAGLAERR   80 (458)
T ss_dssp             -CEEEEEEEEEET--TEEEEEEEEEEETTEEEEEECSCC-------CCTTCEEEEEEEECEEEEEECGGGGGGTTSSCBC
T ss_pred             chhHhhhcceecc--CccccCceEEEECCEEEEEeCCCc-------cccccCCCCEEccCceecccchhhhhhccccccc
Confidence            4567888888763  34 358999999999999998542       2469999999999999999999533110      


Q ss_pred             ---------------------CcCchHH----HHHHHHcCCeeeeecCcCC-----CCCCCCcHHHHHHHHHHHhc---c
Q 015826          114 ---------------------EWEGFPS----GTKAAAAGGITTLIDMPLN-----SDPSTISTETLKLKVDAAEK---R  160 (399)
Q Consensus       114 ---------------------~~e~~~~----~~~~al~~GvTtv~d~~~~-----~~~~~~~~~~~~~~~~~~~~---~  160 (399)
                                           +.++++.    ...+++++||||+.|+.+.     ..+.....+.++...+....   +
T Consensus        81 ~~~~~~~~~w~~~~~~~~~~~~~e~~~~~~~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~g~r  160 (458)
T 4f0l_A           81 GPSADSFWSWREIMYKFALTMTPEQAEAVALRLYVDMLEAGFTRVGEFHYLHHDCDGTPYANLSEMADRIAAAATTAGMG  160 (458)
T ss_dssp             CSCSSTTHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCE
T ss_pred             ccCCCcHHHHHHHhhhhhhhCCHHHHHHHHHHHHHHHHhcCCcEEEeeeeeccccccccccchhhhHHHHHHHHHHcCCe
Confidence                                 1112222    2345789999999997421     11112222223333333221   1


Q ss_pred             CceeEEeee-----eeeCC--------C-hhhHHHHHHHHH--cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 015826          161 IYVDVGFWG-----GLVPE--------N-AYNASALEALLN--AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK  224 (399)
Q Consensus       161 ~~~~~~~~~-----~~~~~--------~-~~~~~~l~~l~~--~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g  224 (399)
                      ..+......     ...+.        . .+..+.++++.+  .+...+++.+.++   ..+.++++.++++++.|+  |
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~~~a~--g  235 (458)
T 4f0l_A          161 LTLLPVFYAHSGFGGAAANEGQRRFINDPERFARLIEGCRKTLEGFEGAVLGVAPH---SLRAVTPDELDSVTQLLP--D  235 (458)
T ss_dssp             EEEEEEECCEEETTTEECCGGGTTTCCCHHHHHHHHHHHHHHHTTCTTCEECBEEC---BTTTSCHHHHHHHTTSST--T
T ss_pred             EEEecchhccccccccCCchhhhhhhcCHHHHHHHHHHHHHHhccCCceEEEEecC---CcCcCCHHHHHHHHHHhc--C
Confidence            111111110     11111        1 112223333332  1212233333332   123578999999999888  9


Q ss_pred             CCEEEec-CChhhc
Q 015826          225 RPLLVHA-EMEKGS  237 (399)
Q Consensus       225 ~~v~~H~-~~~~~~  237 (399)
                      +++++|+ |+....
T Consensus       236 ~~v~~H~~e~~~~~  249 (458)
T 4f0l_A          236 APVHIHVAEQVKEV  249 (458)
T ss_dssp             SCEEEEESCSHHHH
T ss_pred             CCEEEEeCCCHHHH
Confidence            9999997 454443

>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*

Probab=99.70  E-value=2.2e-16  Score=155.89  Aligned_cols=258  Identities=16%  Similarity=0.173  Sum_probs=139.4

Q ss_pred             EEccEEEcCCCc-eeeEEEE-ECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC-----------
Q 015826           47 LTSKRIVTPKGV-ISGAVEI-KEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT-----------  113 (399)
Q Consensus        47 i~n~~vv~~~~~-~~~~V~I-~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~-----------  113 (399)
                      +..++++.+++. .+++|.| +||+|++|++..+.      .+++|++| +|||||||+|+|+.+..+.           
T Consensus         4 ~~~~~~~~~~~~~~~~~v~i~~~g~I~~ig~~~~~------~~~~d~~g-~v~PGfId~H~H~~~~~~rg~~~~~~~~~~   76 (453)
T 3mdu_A            4 IFAERALLPEGWARNVRFEISADGVLAEIRPDANA------DGAERLGG-AVLPGMPNLHSHAFQRAMAGLAEVAGNPND   76 (453)
T ss_dssp             EEEEEEEETTEEEEEEEEEECTTSBEEEEESSCCC------TTSEECSS-CEEECEEEEEECGGGGGGTTTTCCCSSTTC
T ss_pred             cchhheecCCceecCeEEEEecCCEEEEecCCCCc------ccccccCC-cccccceecccchHHHhhccccccccCCCC
Confidence            456677777775 5899999 89999999986432      24689999 9999999999998543211           


Q ss_pred             ----------------CcCchHHH----HHHHHcCCeeeeecCcCCC-----CCCCCcHHHHHHHHHHHhccC-ceeEE-
Q 015826          114 ----------------EWEGFPSG----TKAAAAGGITTLIDMPLNS-----DPSTISTETLKLKVDAAEKRI-YVDVG-  166 (399)
Q Consensus       114 ----------------~~e~~~~~----~~~al~~GvTtv~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~-  166 (399)
                                      +.++++..    ..+++++||||+.|+.+..     .+.....+......+.....+ ...+. 
T Consensus        77 ~l~~wl~~~~~~~~~~~~e~~~~~a~~~~~e~l~~GvTtv~d~~~~~~~~~g~~~~~~~~~~~~~~~a~~~~Gir~~~~~  156 (453)
T 3mdu_A           77 SFWTWRELMYRMVARLSPEQIEVIACQLYIEMLKAGYTAVAEFHYVHHDLDGRSYADPAELSLRISRAASAAGIGLTLLP  156 (453)
T ss_dssp             CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTEEEEEEEECCCSCTTSCCCSSTTHHHHHHHHHHHHHTCEEEEEE
T ss_pred             cHHHHHHHHhhhhhhCCHHHHHHHHHHHHHHHHHcCCcEEEEeeEeccccccccccchhhHHHHHHHHHHHhCCeEEEec
Confidence                            11223322    3457899999999974211     111122233333333332111 11111 


Q ss_pred             -eee--ee---eCC--------C-hhhHHHHHHHHH----cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCE
Q 015826          167 -FWG--GL---VPE--------N-AYNASALEALLN----AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPL  227 (399)
Q Consensus       167 -~~~--~~---~~~--------~-~~~~~~l~~l~~----~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v  227 (399)
                       .+.  +.   .+.        . .+..+.++++.+    .+.   ++.++++.   ...+++++++++++.|+ +|+++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~---~~~~~~e~l~~~~~~A~-~g~~v  229 (453)
T 3mdu_A          157 VLYSHAGFGGQPASEGQRRFINGSEAYLELLQRLRAPLEAAGH---SLGLCFHS---LRAVTPQQIATVLAAGH-DDLPV  229 (453)
T ss_dssp             CBCCBSSTTTCBCCGGGGGGCCCHHHHHHHHHHHHHHHHHHTC---EECEEEEE---TTTSCHHHHHHHHTSSC-TTSCE
T ss_pred             chhccccccCCCCchhhhhccCCHHHHHHHHHHHHHHhhcCCC---eEEEecCC---CCcCCHHHHHHHHHHHh-cCCCE
Confidence             100  00   010        1 112233333322    232   23333321   23579999999999999 99999


Q ss_pred             EEec-CChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh-hHHHHHH
Q 015826          228 LVHA-EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-SSSLDLL  305 (399)
Q Consensus       228 ~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-~~~l~~i  305 (399)
                      ++|+ |+...........+             .+       .+..+.+...        .+.+..+.|.... ++.++.+
T Consensus       230 ~~H~~e~~~e~~~~~~~~g-------------~~-------~v~~l~~~g~--------~~~~~~~~H~~~~~~~~i~~l  281 (453)
T 3mdu_A          230 HIHIAEQQKEVDDCQAWSG-------------RR-------PLQWLYENVA--------VDQRWCLVHATHADPAEVAAM  281 (453)
T ss_dssp             EEEESCSHHHHHHHHHHHS-------------SC-------HHHHHHHHSC--------CCTTEEEEECCSCCHHHHHHH
T ss_pred             EEEeCCCHHHHHHHHHHhC-------------CC-------HHHHHHHcCC--------CCCCeEEEEcCCCCHHHHHHH
Confidence            9995 55554433332221             00       1222222221        2445566665432 1555555


Q ss_pred             HHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          306 MEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       306 ~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                      ++.     .+.+.+||..-.    .+. .+     .+|         +.+.++.|...+++||..
T Consensus       282 a~~-----g~~v~~~P~sn~----~lg-~g-----~~p---------~~~~~~~Gv~v~lgtD~~  322 (453)
T 3mdu_A          282 ARS-----GAVAGLCLSTEA----NLG-DG-----IFP---------ATDFLAQGGRLGIGSDSH  322 (453)
T ss_dssp             HHH-----TCEEEECHHHHH----HTT-CC-----CCC---------HHHHHHTTCEEEECCBTC
T ss_pred             HHc-----CCEEEECchhHh----hcC-CC-----CCC---------HHHHHHCCCEEEEECCCC
Confidence            543     456677884211    010 11     122         455677899999999953

>3hpa_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified}

Probab=99.69  E-value=4.5e-16  Score=153.47  Aligned_cols=186  Identities=15%  Similarity=0.202  Sum_probs=104.8

Q ss_pred             CccEEEEccEEE-cCCC----ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC---
Q 015826           42 YNQYWLTSKRIV-TPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT---  113 (399)
Q Consensus        42 ~~~~li~n~~vv-~~~~----~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~---  113 (399)
                      +.+++|+|++|| ++++    +.+++|+|+||||++||+..+.+.  .+.++||++|++|+|||||+|+|+.+....   
T Consensus        28 p~~llI~na~vi~T~D~~~~vi~~gdV~I~dgrI~aVG~~~~~~~--~~~~vIDa~G~~v~PG~ID~H~H~~~~~~~g~~  105 (479)
T 3hpa_A           28 PKTLLVKHADVLVTMDDTRRELRDAGLYIEDNRIVAVGPSAELPE--TADEVLDLRGHLVIPGLVNTHHHMYQSLTRAVP  105 (479)
T ss_dssp             -CEEEEEEEEEEECCCTTCCEEEEEEEEEETTEEEEEEEGGGSCS--CCSEEEECTTEEEEECEEECCCCGGGGGSCSCT
T ss_pred             CCCEEEECCEEEEeeCCCCCEEcCcEEEEECCEEEEEeCCccCCC--CCCeEEECCCCEEeeCceeHhhCcchhcccccc
Confidence            358999999976 4433    258999999999999998655432  366899999999999999999998543211   


Q ss_pred             C---c------------------Cc----hHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEee
Q 015826          114 E---W------------------EG----FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW  168 (399)
Q Consensus       114 ~---~------------------e~----~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (399)
                      .   .                  ++    .......+++.|+|++.++.... ..................+........
T Consensus       106 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~  184 (479)
T 3hpa_A          106 AAQNAELFGWLTNLYKIWAHLTPEMIEVSTLTAMAELLQSGCTTSSDHLYIY-PNGSRLDDSIGAAQRIGMRFHASRGAM  184 (479)
T ss_dssp             TTTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTTEEEEECCBCCC-CTTCCHHHHHHHHHHHTCEEEEEEEEC
T ss_pred             cCCCcchHHHHhhhhhhhhhcCHHHHHHHHHHHHHHHHHhCCceecceeeec-cchhhHHHHHHHHHHhcchhhhhhhee
Confidence            0   0                  01    11234567899999999886322 222222222222211111111111100


Q ss_pred             e-e-----ee-----CCChhhHHHHHHHHH----cCCcE-EEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015826          169 G-G-----LV-----PENAYNASALEALLN----AGVLG-LKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE  232 (399)
Q Consensus       169 ~-~-----~~-----~~~~~~~~~l~~l~~----~G~~~-ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~  232 (399)
                      . .     ..     .......+...++..    .+... ......+.   .....+.+.+.++.+.|++.|..+.+|..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~g~~~~~h~~  261 (479)
T 3hpa_A          185 SVGQRDGGLPPDSVVEREPDILRDTQRLIETYHDEGRYAMLRVVVAPC---SPFSVSRDLMRDAAVLAREYGVSLHTHLA  261 (479)
T ss_dssp             C----------------CHHHHHHHHHHHHHHCCCSTTCSEEEEEEES---CTTTSCHHHHHHHHHHHHHHTCEEEEEES
T ss_pred             eccccccCCCchhhhhhhhhHHHHHHHHHHHhhhhcccccceeEeccc---ccccCCHHHHHHHHHHHHhcCCeEEeecc
Confidence            0 0     00     000111222222221    12111 11112221   12356889999999999999999999964


Q ss_pred             C
Q 015826          233 M  233 (399)
Q Consensus       233 ~  233 (399)
                      .
T Consensus       262 ~  262 (479)
T 3hpa_A          262 E  262 (479)
T ss_dssp             C
T ss_pred             c
Confidence            3

>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*

Probab=99.69  E-value=2.8e-16  Score=157.46  Aligned_cols=65  Identities=22%  Similarity=0.279  Sum_probs=52.3

Q ss_pred             cEEEEccEEEcCCCc--eeeEEEEECCEEEEeccCCCCCC-C-CCCCcEEeCCCCEEecceeecccccC
Q 015826           44 QYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPR-N-SKTGQVVDYGEAVIMPGLIDVHAHLD  108 (399)
Q Consensus        44 ~~li~n~~vv~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~-~-~~~~~vID~~G~~vlPGlID~H~H~~  108 (399)
                      +++|+|++|+++++.  ...+|+|+||||++||+..+... . .++.++||++|++|+|||||+|+|+.
T Consensus        37 ~~li~ng~I~t~~~~~~~~~~v~v~~g~I~~vg~~~~~~~~~~~~~~~viD~~G~~v~PGfiD~H~H~~  105 (534)
T 3icj_A           37 MKALINGTIYTSFSPVKKVSGLVISNERVLYAGDSSTALRIAELAGGEIIDLKGKFVMPAFFDSHLHLD  105 (534)
T ss_dssp             EEEEESSEEEEEETTEEEESEEEEETTEEEEEECHHHHHHHHHHHTCEEEECTTCEEEECEEEEEECHH
T ss_pred             CEEEECCEEECCCCCCceeeEEEEECCEEEEEcChHHHHhhccCCCCEEEECCCCEEecCEeehhhhhh
Confidence            489999999998774  46899999999999997543210 0 12568999999999999999999973

>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*

Probab=99.65  E-value=1.3e-15  Score=145.52  Aligned_cols=94  Identities=27%  Similarity=0.271  Sum_probs=76.5

Q ss_pred             EEEEccEEEcCCCce-eeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC-C---CCcCchH
Q 015826           45 YWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-R---TEWEGFP  119 (399)
Q Consensus        45 ~li~n~~vv~~~~~~-~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~---~~~e~~~  119 (399)
                      ++|+|++|+++++.. +++|+|+||||++|++..+.+   ++.++||++|++|+|||||+|+|..... +   .+++++.
T Consensus         5 ~~i~n~~i~~~~~~~~~~~i~I~dG~I~~i~~~~~~~---~~~~viD~~G~~v~PGfID~HvHg~~G~~~~d~~~~e~l~   81 (381)
T 3iv8_A            5 YALTNCKIYTGNDVLVKHAVIINGDKIEAVCPIESLP---SEMNVVDLNGANLSPGFIDLQLNGCGGVMFNDEITAETID   81 (381)
T ss_dssp             EEEEEEEEECSSCEESSEEEEEETTEEEEEEEGGGSC---TTCEEEEEEEEEEEECEEEEEECEETTEETTTSCSHHHHH
T ss_pred             EEEEccEEEcCCCeEeccEEEEECCEEEEEeCCCCCC---CCCeEEECCCCEEccCeEeeeecccCCCCCCCCCCHHHHH
Confidence            689999999998754 679999999999998754322   3568999999999999999999975321 1   3456788


Q ss_pred             HHHHHHHcCCeeeeecCcCCCCC
Q 015826          120 SGTKAAAAGGITTLIDMPLNSDP  142 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~~~~~~~  142 (399)
                      ..++.++++||||++.+. .+.|
T Consensus        82 ~~~~a~~~~GvTt~l~t~-~T~~  103 (381)
T 3iv8_A           82 TMHKANLKSGCTSFLPTL-ITSS  103 (381)
T ss_dssp             HHHHHHHHTTEEEEEEEE-ESCC
T ss_pred             HHHHHHHhCCcccccccc-CCCC
Confidence            889999999999999887 4444

>3ggm_A Uncharacterized protein BT9727_2919; bacillus cereus group., structural genomics, PSI-2, protein structure initiative; 2.00A {Bacillus thuringiensis serovarkonkukian}

Probab=99.64  E-value=3.4e-16  Score=116.13  Aligned_cols=72  Identities=21%  Similarity=0.235  Sum_probs=58.3

Q ss_pred             CccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCC
Q 015826           42 YNQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRT  113 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~  113 (399)
                      +.+++|+|++|+++++  ...++|+|+||||++|++........++.++||++|++|+|||||+|+|+.+|...
T Consensus         3 ~~~~li~n~~i~~~~~~~~~~~~i~I~~g~I~~ig~~~~~~~~~~~~~viD~~g~~v~PG~ID~H~H~~~p~~~   76 (81)
T 3ggm_A            3 VPDMILYNGKITTLDPSQPEVSAIAITDGLITAVGGDELLNSATEKTKKIDLKRKRAIPGLNDSHIHVIRGLEH   76 (81)
T ss_dssp             CCSEEEESSEEECSCTTCSEESEEEEETTEEEEEESGGGGGGCCTTCEEEECTTCEEEECCCCTTEEEECCCC-
T ss_pred             cCCEEEECCEEEeCCCCCccccEEEEECCEEEEEeCchHhcccCCCCEEEECCCCEEeeCeEeeeeCCCCcccc
Confidence            4689999999999875  35789999999999999754322112356899999999999999999999988643

>3mtw_A L-arginine carboxypeptidase CC2672; hydrolase; HET: KCX M3R; 1.70A {Caulobacter vibrioides}

Probab=99.61  E-value=5.7e-14  Score=133.18  Aligned_cols=188  Identities=21%  Similarity=0.179  Sum_probs=110.2

Q ss_pred             cEEEEccEEEcCCC---ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCCcCc---
Q 015826           44 QYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTEWEG---  117 (399)
Q Consensus        44 ~~li~n~~vv~~~~---~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~~e~---  117 (399)
                      .+.|+|++|+|+..   +.+++|+|+||||++||+..+..  +++.++||++|++|+|||||+|+|+...+......   
T Consensus         3 ~~aI~narviD~~~g~~i~~~~V~I~dG~I~~Ig~~~~~~--~~~~~vID~~G~~v~PG~ID~H~H~~~~~~~~~~~~~~   80 (403)
T 3mtw_A            3 IKAVSAARLLDVASGKYVDNPLVIVTDGRITSIGKKGDAV--PAGATAVDLPGVTLLPGLIDMHVHLDSLAEVGGYNSLE   80 (403)
T ss_dssp             EEEEEEEEEEETTTTEEEESEEEEEETTEEEEEEETTCCC--CTTCEEEEEEEEEEEECEEEEEECTTCCTTCCGGGGGG
T ss_pred             cEEEEceEEEECCCCcEecCcEEEEECCEEEEEeCCCCCC--CCCCEEEECCCCEEEeChheeeeCCccccccCcccccc
Confidence            46799999999865   24799999999999999865432  24678999999999999999999998764432111   


Q ss_pred             ----h-----HHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEe--eeee----e----------
Q 015826          118 ----F-----PSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF--WGGL----V----------  172 (399)
Q Consensus       118 ----~-----~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~----------  172 (399)
                          .     .......+..|+|+..+... ..   .......................  ....    .          
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  156 (403)
T 3mtw_A           81 YSDRFWSVVQTANAKKTLEAGFTTVRNVGA-AD---YDDVGLREAIDAGYVPGPRIVTAAISFGATGGHCDSTFFPPSMD  156 (403)
T ss_dssp             SCHHHHHHHHHHHHHHHHHTTEEEEEECCC-ST---THHHHHHHHHHTTSSCCCEEEECCSCEESTTSTTSCCSSCGGGC
T ss_pred             ccHHHHhhhhhhhhhhccccccceeecccc-cc---ccchhhhhhhhccccccccccccccccccccccccccccccccc
Confidence                0     11234457889999987762 11   11111111111111110000000  0000    0          


Q ss_pred             ---CCC----hhhHHHHHHHHHcCCcEEEEeecCC-----CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhc
Q 015826          173 ---PEN----AYNASALEALLNAGVLGLKSFMCPS-----GINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGS  237 (399)
Q Consensus       173 ---~~~----~~~~~~l~~l~~~G~~~ik~~~~~~-----~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~  237 (399)
                         ...    .+...........+....+......     ..........+++.++++.|++++..+.+|.......
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  233 (403)
T 3mtw_A          157 QKNPFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAHGASGI  233 (403)
T ss_dssp             CCCTTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEECSHHHH
T ss_pred             cccccccchhHHHhhhhHhhhhhcchhhhhhhccccccccccccccccCHHHHHHHHHHHHHcCCeEEEEeccchhH
Confidence               000    0112333444455655554432211     1112235678999999999999999999998765543

>3mkv_A Putative amidohydrolase; sargasso SEA, structural genomics, protein structure initiat NEW YORK structural genomix research consortium, nysgxrc; HET: KCX; 2.40A {Undefined}

Probab=99.52  E-value=1.4e-14  Score=138.02  Aligned_cols=94  Identities=21%  Similarity=0.285  Sum_probs=69.0

Q ss_pred             CCccEEEEccEEEcCCC---ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCCCC---
Q 015826           41 PYNQYWLTSKRIVTPKG---VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE---  114 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~---~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~---  114 (399)
                      .|.+++|+||+|+|+++   ..+++|+|+||||++|++....+   ++.++||++|++|+|||||+|+|+...+...   
T Consensus         2 sM~~lli~ng~i~d~~~~~~~~~~dV~I~~G~I~~Ig~~~~~~---~~~~vID~~G~~v~PGfID~H~H~~~~~~~~~~~   78 (426)
T 3mkv_A            2 SLTTFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKS---SNAHVIDVKGKTIMPGLIDLHVHVVAIEFNLPRV   78 (426)
T ss_dssp             -CCEEEEEEEEECCTTSSSCEEEEEEEEETTEEEEEESSCCCC---SSCEEEECTTCEEEECEEEEEECTTCCSSCHHHH
T ss_pred             CcCcEEEECeEEEeCCCCcEecCcEEEEECCEEEEecCCCCCC---CCCEEEECCCCEEEeChhhhhhCcccccCCcccc
Confidence            47799999999999875   24689999999999999865433   4678999999999999999999987654321   


Q ss_pred             --cCchH------HHHHHHHcCCeeeeecCc
Q 015826          115 --WEGFP------SGTKAAAAGGITTLIDMP  137 (399)
Q Consensus       115 --~e~~~------~~~~~al~~GvTtv~d~~  137 (399)
                        .....      .........++|+.....
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (426)
T 3mkv_A           79 ATLPNVLVTLRAVPIMRAMLRRGFTTVRDAG  109 (426)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHTTEEEEEECS
T ss_pred             cccchhHHHHHHHhhhhhhhccccccccccc
Confidence              11111      122344567777776554

>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10

Probab=99.46  E-value=8e-14  Score=134.08  Aligned_cols=70  Identities=27%  Similarity=0.420  Sum_probs=58.2

Q ss_pred             eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCC-CCCcCchHHHHHHHHcCCeeeeecCc
Q 015826           59 ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPG-RTEWEGFPSGTKAAAAGGITTLIDMP  137 (399)
Q Consensus        59 ~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~-~~~~e~~~~~~~~al~~GvTtv~d~~  137 (399)
                      .+++|+|+||||++|++         . + || +|++|+|||||+|+|+.+++ +... ++...+++++++||||+++++
T Consensus        28 ~~~~V~I~~g~I~~vg~---------~-~-iD-~g~~v~PGlID~H~H~~~~~~~~~~-~l~~~~~~~l~~GvTtv~d~~   94 (376)
T 1o12_A           28 FTGDVEIEEGKIVKVEK---------R-E-CI-PRGVLMPGFVDPHIHGVVGADTMNC-DFSEMEEFLYSQGVTTFLATT   94 (376)
T ss_dssp             EEEEEEEETTEEEEEEE---------C-C-SC-CSSEEEECEEEEEECEETTEETTTT-CHHHHHHHHHTTTEEEEEEEC
T ss_pred             cCceEEEECCEEEEeCC---------C-c-cC-CCCEEccCeEEEeecCCCCCCCChh-hHHHHHHHHHhCCcEEEEecc
Confidence            68999999999999985         1 4 89 99999999999999998765 3332 477788999999999999998


Q ss_pred             CCCCC
Q 015826          138 LNSDP  142 (399)
Q Consensus       138 ~~~~~  142 (399)
                       ++.|
T Consensus        95 -~~~~   98 (376)
T 1o12_A           95 -VSTS   98 (376)
T ss_dssp             -CSCC
T ss_pred             -CCCC
Confidence             4433

>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3

Probab=98.88  E-value=5.9e-08  Score=89.30  Aligned_cols=208  Identities=14%  Similarity=0.133  Sum_probs=113.4

Q ss_pred             ceeecccccCCCC--C--------CCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEee
Q 015826           99 GLIDVHAHLDDPG--R--------TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW  168 (399)
Q Consensus        99 GlID~H~H~~~~~--~--------~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (399)
                      |+||+|+|+..++  .        ...+......+.+.++|||++++++. . +...+.+.+.+..+..   + +++...
T Consensus         6 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~-~-~~~~~~~~~~~~~~~~---~-~~v~~~   79 (291)
T 1bf6_A            6 GYTLAHEHLHIDLSGFKNNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTN-R-YMGRNAQFMLDVMRET---G-INVVAC   79 (291)
T ss_dssp             SEEEEEECSSEECHHHHTCGGGEECCHHHHHHHHHHHHHTTEEEEEECCC-G-GGTCCHHHHHHHHHHH---C-CEEEEE
T ss_pred             ceeeeccCeecCCcccccCCCcccCCHHHHHHHHHHHHHcCCCEEEecCC-C-cCCCCHHHHHHHHHhc---C-CeEEEe
Confidence            9999999996432  1        11122334566778999999998872 1 1112233333322221   1 222222


Q ss_pred             eee-----eCC-----ChhhH-HHHHHHHHcCCc-------EEE-EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEE
Q 015826          169 GGL-----VPE-----NAYNA-SALEALLNAGVL-------GLK-SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLV  229 (399)
Q Consensus       169 ~~~-----~~~-----~~~~~-~~l~~l~~~G~~-------~ik-~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~  229 (399)
                      .++     .+.     ..+.+ +.+.+.++.|+.       .++ +.+.+.   .......+.+++.++.|+++|++|.+
T Consensus        80 ~G~~~~~~hP~~~~~~~~~~l~~~~~~~l~~gi~~~~~~~~~iGe~gld~~---~~~~~~~~~~~~~~~~a~~~~~pv~i  156 (291)
T 1bf6_A           80 TGYYQDAFFPEHVATRSVQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEG---KITPLEEKVFIAAALAHNQTGRPIST  156 (291)
T ss_dssp             ECCCCGGGCCTHHHHSCHHHHHHHHHHHHHTCSTTSSCCEEEEEEEECBTT---BCCHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred             eccccCccCcHhhhcCCHHHHHHHHHHHHHhccCCcCcceeeEEEEecCCC---CCCHHHHHHHHHHHHHHHHHCCeEEE
Confidence            233     221     11112 333444444431       222 112211   01111235688899999999999999


Q ss_pred             ecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHH
Q 015826          230 HAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK  309 (399)
Q Consensus       230 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak  309 (399)
                      |+++...                               +. +.++++++.+    ....++++.|.+.. .+++.++++.
T Consensus       157 H~~~~~~-------------------------------~~-~~~~~l~~~~----~~~~~~~i~H~~~~-~~~~~~~~~~  199 (291)
T 1bf6_A          157 HTSFSTM-------------------------------GL-EQLALLQAHG----VDLSRVTVGHCDLK-DNLDNILKMI  199 (291)
T ss_dssp             ECGGGCS-------------------------------HH-HHHHHHHHTT----CCGGGEEECCCCSS-CCHHHHHHHH
T ss_pred             eCCCCCC-------------------------------hH-HHHHHHHHcC----CCchhEEEECCCCC-CCHHHHHHHH
Confidence            9964210                               00 2234444321    12357899999653 4578888888


Q ss_pred             HCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCcc--EEeCCCC
Q 015826          310 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSSDHS  370 (399)
Q Consensus       310 ~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id--~i~sdh~  370 (399)
                      ++|..++++.+..        .   .     .+|  .....+.+++.++.|.+|  +++||.-
T Consensus       200 ~~G~~i~~~~~~~--------~---~-----~~~--~~~~~~~~~~~~~~~~~dril~~TD~p  244 (291)
T 1bf6_A          200 DLGAYVQFDTIGK--------N---S-----YYP--DEKRIAMLHALRDRGLLNRVMLSMDIT  244 (291)
T ss_dssp             HTTCEEEECCTTC--------T---T-----TSC--HHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred             HCCCEEEEccCcc--------c---C-----CCC--HHHHHHHHHHHHHhCCCCeEEEcCCCC
Confidence            8898887764320        0   0     122  234667899999999788  7789873

>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*

Probab=98.46  E-value=4e-06  Score=77.96  Aligned_cols=210  Identities=19%  Similarity=0.214  Sum_probs=106.1

Q ss_pred             ceeecccccCCCCCCC-----c-----CchHH---HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeE
Q 015826           99 GLIDVHAHLDDPGRTE-----W-----EGFPS---GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV  165 (399)
Q Consensus        99 GlID~H~H~~~~~~~~-----~-----e~~~~---~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (399)
                      |+||+|+|+.......     .     .+...   ....+.+.|||++++....  ....+.+.+.+..+......+...
T Consensus        17 G~iD~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~--~~~~~~~~~~~~~~~~~~~v~~~~   94 (314)
T 2vc7_A           17 GFTLIHEHLRVFSEAVRQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVM--GLGRDIRFMEKVVKATGINLVAGT   94 (314)
T ss_dssp             CSEESSCBSCBCCHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCB--TTTCCHHHHHHHHHHHCCEEEECE
T ss_pred             CCcccccccccCcchhcccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCC--CCCcCHHHHHHHHHHcCCeEEEEe
Confidence            9999999997532110     0     11111   2356779999999988622  111223333333222211122223


Q ss_pred             Eeeeeee-CCC--hhhHHHHHHHHH----cCCc--E-----EEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015826          166 GFWGGLV-PEN--AYNASALEALLN----AGVL--G-----LKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA  231 (399)
Q Consensus       166 ~~~~~~~-~~~--~~~~~~l~~l~~----~G~~--~-----ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~  231 (399)
                      +++.... +..  ....+++.++++    .|+.  +     +++.+.+..   ......+.+++.++.|+++|++|.+|+
T Consensus        95 G~hp~~~~~~~~~~~~~~~l~~~~~~~~~~gige~G~~~g~i~~~ld~~~---~~~~q~~~~~~~~~lA~~~~~pv~iH~  171 (314)
T 2vc7_A           95 GIYIYIDLPFYFLNRSIDEIADLFIHDIKEGIQGTLNKAGFVKIAADEPG---ITKDVEKVIRAAAIANKETKVPIITHS  171 (314)
T ss_dssp             EBCCSSCCCGGGTTCCHHHHHHHHHHHHHTCSSSSSCCCCSEEEECCTTC---SCHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             ecCCCCCCchhhhccCHHHHHHHHHHHHHhhcccCCCCCCeEEEeecCCC---CCHHHHHHHHHHHHHHHHHCCEEEEeC
Confidence            3322111 001  112445554442    2221  2     233332221   111123457788999999999999999


Q ss_pred             CC--hhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHH
Q 015826          232 EM--EKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAK  309 (399)
Q Consensus       232 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak  309 (399)
                      ..  ...                                 .+++++.++.+    ....++.+.|.... .+.+.++++.
T Consensus       172 ~~~~~~~---------------------------------~~~~~~l~~~~----~~~~~~~i~H~~~~-~~~~~~~~~~  213 (314)
T 2vc7_A          172 NAHNNTG---------------------------------LEQQRILTEEG----VDPGKILIGHLGDT-DNIDYIKKIA  213 (314)
T ss_dssp             CTTTTHH---------------------------------HHHHHHHHHTT----CCGGGEEETTGGGC-CCHHHHHHHH
T ss_pred             CCcccCh---------------------------------HHHHHHHHHcC----CCcccEEEECCCCC-CCHHHHHHHH
Confidence            51  110                                 12333444321    01236778898542 3467777777


Q ss_pred             HCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCcc--EEeCCC
Q 015826          310 TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSSDH  369 (399)
Q Consensus       310 ~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id--~i~sdh  369 (399)
                      +.|..+..+.+.. .           +    .+  +....++.+.+.+..|-.|  +++||-
T Consensus       214 ~~G~~i~~~~~~~-~-----------~----~~--~~~~~~~~i~~~~~~g~~drilleTD~  257 (314)
T 2vc7_A          214 DKGSFIGLDRYGL-D-----------L----FL--PVDKRNETTLRLIKDGYSDKIMISHDY  257 (314)
T ss_dssp             HTTCEEEECCTTC-T-----------T----TS--CHHHHHHHHHHHHHTTCTTTEEECCCC
T ss_pred             HcCCEEEEeCCCc-c-----------c----CC--CHHHHHHHHHHHHHcCCCCeEEEcCCc
Confidence            7887665553210 0           0    00  1133456677777877677  999996

>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12

Probab=98.28  E-value=1.2e-05  Score=72.41  Aligned_cols=123  Identities=20%  Similarity=0.193  Sum_probs=67.8

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCC----
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN----  175 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  175 (399)
                      +||+|+|+....+.  .+.......+.+.||++++....  .+  .+.+.+.+   ......  ++....++.+..    
T Consensus         5 ~iD~H~Hl~~~~~~--~~~~~~l~~~~~~Gv~~~v~~~~--~~--~~~~~~~~---l~~~~~--~~~~~~G~hP~~~~~~   73 (259)
T 1zzm_A            5 FIDTHCHFDFPPFS--GDEEASLQRAAQAGVGKIIVPAT--EA--ENFARVLA---LAENYQ--PLYAALGLHPGMLEKH   73 (259)
T ss_dssp             EEESCBCTTSTTTT--TCHHHHHHHHHHTTEEEEEEECC--SG--GGHHHHHH---HHHHCT--TEEEEECCCGGGGGGC
T ss_pred             EEEeeecCCchhhc--cCHHHHHHHHHHcCCCEEEEecC--CH--HHHHHHHH---HHHhCC--CeEEEEEecccccccC
Confidence            89999999865432  24455667788999999987641  11  22332222   222221  121222333321    


Q ss_pred             -hhhHHHHHHHHHc---CCcEEE-EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          176 -AYNASALEALLNA---GVLGLK-SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       176 -~~~~~~l~~l~~~---G~~~ik-~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                       .+..++++++++.   ++.+++ +.+.+...........+.+++.++.|+++|+||.+|+.+
T Consensus        74 ~~~~~~~l~~~~~~~~~~~~~iGEiGld~~~~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~  136 (259)
T 1zzm_A           74 SDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRR  136 (259)
T ss_dssp             CHHHHHHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred             CHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecc
Confidence             2345677776643   444442 222221000000123457889999999999999999964

>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}

Probab=98.21  E-value=3.4e-05  Score=70.08  Aligned_cols=127  Identities=15%  Similarity=0.201  Sum_probs=67.7

Q ss_pred             ceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeee-eCC---
Q 015826           99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGL-VPE---  174 (399)
Q Consensus        99 GlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---  174 (399)
                      ++||+|+|+....+.  .+.......+.+.||+++++.+.  .+  .+.+.+.+..+......+..++++... ...   
T Consensus         5 ~~iD~H~Hl~~~~~~--~~~~~~l~~~~~~Gv~~~v~~~~--~~--~~~~~~~~l~~~~~~~i~~~~GihP~~~~~~~~~   78 (272)
T 2y1h_A            5 GLVDCHCHLSAPDFD--RDLDDVLEKAKKANVVALVAVAE--HS--GEFEKIMQLSERYNGFVLPCLGVHPVQGLPPEDQ   78 (272)
T ss_dssp             CEEEEEECTTSGGGT--TTHHHHHHHHHHTTEEEEEECCS--SG--GGHHHHHHHHHHTTTTEEEEECCCSBC-------
T ss_pred             cEEEEeeCCCchhhh--cCHHHHHHHHHHCCCCEEEEeCC--CH--HHHHHHHHHHHHCCCCEEEEEEECCCcccccccc
Confidence            599999999764322  24455567788999999988752  11  222222222222211122223333211 111   


Q ss_pred             ---ChhhHHHHHHHHH---cCCcEEEE-eecCCCCCCCC------CCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          175 ---NAYNASALEALLN---AGVLGLKS-FMCPSGINDFP------MTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       175 ---~~~~~~~l~~l~~---~G~~~ik~-~~~~~~~~~~~------~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                         ..+..+++.++++   ..+.+++- .+.+.  ..+.      ....+.+++.++.|+++|+||.+|+.+
T Consensus        79 ~~~~~~~~~~l~~~~~~~~~~~~~iGE~Gld~~--~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~  148 (272)
T 2y1h_A           79 RSVTLKDLDVALPIIENYKDRLLAIGEVGLDFS--PRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRS  148 (272)
T ss_dssp             CBCCHHHHHHHHHHHHHHGGGCSEEEEEECCCC--TTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTT
T ss_pred             ccCCHHHHHHHHHHHHhCCCCEEEEEeccCCCc--cccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCC
Confidence               1123556666554   24445532 22221  0000      112457889999999999999999964

>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...

Probab=98.16  E-value=6.5e-06  Score=77.17  Aligned_cols=223  Identities=15%  Similarity=0.148  Sum_probs=109.7

Q ss_pred             ceeecccccCCCCCCC-----c-----CchHH----HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCcee
Q 015826           99 GLIDVHAHLDDPGRTE-----W-----EGFPS----GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD  164 (399)
Q Consensus        99 GlID~H~H~~~~~~~~-----~-----e~~~~----~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (399)
                      ||||+|+|+...+...     .     ++...    ....+.+.|||++++...  .....+.+.+.+..+......+..
T Consensus        16 GliD~H~HL~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~--~~~~~~~~~~~~la~~~~~~i~~~   93 (330)
T 2ob3_A           16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVST--FDIGRDVSLLAEVSRAADVHIVAA   93 (330)
T ss_dssp             CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCC--GGGTCCHHHHHHHHHHHTCEEECE
T ss_pred             CCceeeeCeecCCchhccCCCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCC--CCcCCCHHHHHHHHHHhCCcEEEE
Confidence            9999999997632110     1     12212    246678999999998762  111123444433333221122333


Q ss_pred             EEeeeeeeCC-----ChhhH-HHHHHHHHcC-------CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015826          165 VGFWGGLVPE-----NAYNA-SALEALLNAG-------VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA  231 (399)
Q Consensus       165 ~~~~~~~~~~-----~~~~~-~~l~~l~~~G-------~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~  231 (399)
                      .++|. ..+.     ..+.+ +.+.+.+..|       +..+++.+. .   .......+.+++.++.|+++|+||++|+
T Consensus        94 ~G~hp-~~p~~~~~~~~~~l~~~l~~~~~~gi~~~~~k~~aiEiGld-~---~~~~~q~~~f~~q~~lA~~~glPv~iH~  168 (330)
T 2ob3_A           94 TGLWF-DPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATT-G---KATPFQELVLKAAARASLATGVPVTTHT  168 (330)
T ss_dssp             EECCS-CCCHHHHTCCHHHHHHHHHHHHHTCSTTSCCCCSEEEEECS-S---SCCHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred             ecCCc-CCCchhccCCHHHHHHHHHHHHHhhccccccceeEEEEeCC-C---CCCHHHHHHHHHHHHHHHHhCCeEEEEC
Confidence            44442 1111     11122 2233333222       334455443 1   1111123448888999999999999998


Q ss_pred             CChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCC-ChhHHHHHHHHHHH
Q 015826          232 EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS-DASSSLDLLMEAKT  310 (399)
Q Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s-~~~~~l~~i~~ak~  310 (399)
                      .....                              .+. ++++++++.+.    ...++.+.|.. +  .+.+..+++.+
T Consensus       169 ~~~~r------------------------------~a~-e~l~iL~~~g~----~~~~~~i~H~f~~--~~~e~a~~~~~  211 (330)
T 2ob3_A          169 AASQR------------------------------DGE-QQAAIFESEGL----SPSRVCIGHSDDT--DDLSYLTALAA  211 (330)
T ss_dssp             CGGGT------------------------------HHH-HHHHHHHHTTC----CGGGEEECSGGGC--CCHHHHHHHHH
T ss_pred             CCCCC------------------------------CHH-HHHHHHHHcCc----CcccEEEeCCCCC--CCHHHHHHHHh
Confidence            52110                              022 33444444310    01245688986 4  35688888888


Q ss_pred             CCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCcc--EEeCCC
Q 015826          311 NGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSSDH  369 (399)
Q Consensus       311 ~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id--~i~sdh  369 (399)
                      .|..+..++.. ...+..+....+-... ..+|  ..+..+.+.++++.|-.|  ++.||-
T Consensus       212 ~G~~i~~~~~G-~~tf~~~~~~~~~~~~-~~~~--~~~~~~~l~~~~~~~p~drilleTD~  268 (330)
T 2ob3_A          212 RGYLIGLDHIP-YSAIGLEDNASASALL-GIRS--WQTRALLIKALIDQGYMKQILVSNDW  268 (330)
T ss_dssp             TTCEEEECCTT-CCCTTCTTCHHHHHHH-CSSC--HHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred             CCCEEEeCCCc-cccccccccccccccc-cCCC--HHHHHHHHHHHHHhCCCCeEEEeCCC
Confidence            99877666311 1111000000000000 0111  123345688889998666  789995

>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12

Probab=98.00  E-value=0.00011  Score=66.11  Aligned_cols=121  Identities=21%  Similarity=0.319  Sum_probs=69.2

Q ss_pred             eeecccccCCCCCCC-cCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCCh--
Q 015826          100 LIDVHAHLDDPGRTE-WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA--  176 (399)
Q Consensus       100 lID~H~H~~~~~~~~-~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  176 (399)
                      +||+|+|+..+.+.. ..+.....+.+.+.||++++...  +     .....+...+......  ++....++.+...  
T Consensus         3 ~iD~H~Hl~~~~~~~~~~~~~~~l~~~~~~Gv~~~v~~~--~-----~~~~~~~~~~~~~~~p--~~~~~~g~hP~~~~~   73 (265)
T 1yix_A            3 LVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVA--T-----TLPSYLHMRDLVGERD--NVVFSCGVHPLNQND   73 (265)
T ss_dssp             EEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECC--S-----SHHHHHHHHHHHCSCT--TEEEEECCCTTCCSS
T ss_pred             EEEEeeCCCchhhcccccCHHHHHHHHHHCCCCEEEEeC--C-----CHHHHHHHHHHHHHCC--CeEEEEEeCCCcccc
Confidence            899999997654311 23455667778889999987653  1     1233333344443322  2222233333221  


Q ss_pred             -hhHHHHHHHHHc------CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          177 -YNASALEALLNA------GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       177 -~~~~~l~~l~~~------G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                       ...++++++++.      |..|++.+..+.    ......+.+++.++.|+++|++|.+|+.+
T Consensus        74 ~~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~----~~~~q~~~~~~~~~~a~~~~~pv~iH~~~  133 (265)
T 1yix_A           74 PYDVEDLRRLAAEEGVVALGETGLDYYYTPE----TKVRQQESFIHHIQIGRELNKPVIVHTRD  133 (265)
T ss_dssp             CCCHHHHHHHHTSTTEEEEEEEEEECTTCSS----CHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred             cchHHHHHHHhccCCeEEEEccccCCCcCCC----ChHHHHHHHHHHHHHHHHhCCCEEEEecC
Confidence             136778877653      222333211110    01234567899999999999999999853

>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}

Probab=97.99  E-value=0.00016  Score=66.47  Aligned_cols=125  Identities=14%  Similarity=0.079  Sum_probs=74.8

Q ss_pred             cceeecccccCCCCCC--------C--cCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEe
Q 015826           98 PGLIDVHAHLDDPGRT--------E--WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGF  167 (399)
Q Consensus        98 PGlID~H~H~~~~~~~--------~--~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  167 (399)
                      |++||+|+|+..+.+.        .  ..+.......+-+.||+.++....+.. ...+ +.+.+..+....+    +..
T Consensus        25 ~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~-~~~n-~~~~~~~~~~p~r----~~g   98 (294)
T 4i6k_A           25 MNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFL-GTNN-QAMLNAIQQYPDR----LKG   98 (294)
T ss_dssp             CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGG-TTCC-HHHHHHHHHSTTT----EEE
T ss_pred             CCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCccc-ccch-HHHHHHHHHCCCe----EEE
Confidence            4789999999865331        0  234555667778899998876541111 1112 2222222222111    111


Q ss_pred             eeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          168 WGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       168 ~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ..++.+..  ..++++++.+.|+.+|+......   ..+....+.+...++.|+++|++|.+|+..
T Consensus        99 ~~~v~P~~--~~~eL~~l~~~gv~Gi~l~~~~~---~~~~~~~~~~~~~~~~a~~~glpv~iH~~~  159 (294)
T 4i6k_A           99 IAVVQHTT--TFNELVNLKAQGIVGVRLNLFGL---NLPALNTPDWQKFLRNVESLNWQVELHAPP  159 (294)
T ss_dssp             EECCCTTC--CHHHHHHHHTTTEEEEEEECTTS---CCCCSSSHHHHHHHHHHHHTTCEEEEECCH
T ss_pred             EEEeCCcc--cHHHHHHHHHCCCcEEEeccCCC---CCCCcccHHHHHHHHHHHHcCCEEEEeeCc
Confidence            12233322  24678888888999999654321   112345689999999999999999999964

>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12

Probab=97.98  E-value=9e-05  Score=66.88  Aligned_cols=122  Identities=14%  Similarity=0.102  Sum_probs=67.8

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCC----
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN----  175 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  175 (399)
                      +||+|+|+....+.  .+.......+.+.||++++....       +.+..+...+.+.....  +....++.+..    
T Consensus         5 ~iD~H~Hl~~~~~~--~~~~~~l~~~~~~Gv~~~v~~~~-------~~~~~~~~~~l~~~~~~--i~~~~G~hP~~~~~~   73 (264)
T 1xwy_A            5 MFDIGVNLTSSQFA--KDRDDVVACAFDAGVNGLLITGT-------NLRESQQAQKLARQYSS--CWSTAGVHPHDSSQW   73 (264)
T ss_dssp             CEEEEECTTSGGGT--TTHHHHHHHHHHTTCCEEEECCC-------SHHHHHHHHHHHHHSTT--EEEEECCCGGGGGGC
T ss_pred             EEEEeeCCCChhhc--cCHHHHHHHHHHCCCCEEEEeCC-------CHHHHHHHHHHHHhCCC--EEEEEEECCcccccC
Confidence            89999999764321  24455567788999999887641       13333444444333221  21222333321    


Q ss_pred             -hhhHHHHHHHHHc-CCcEEEE-eecCCCCCCCC-CCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          176 -AYNASALEALLNA-GVLGLKS-FMCPSGINDFP-MTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       176 -~~~~~~l~~l~~~-G~~~ik~-~~~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                       .+..++++++++. ++.+++- .+.+.. ...+ ....+.+++.++.|+++|+||.+|+.+
T Consensus        74 ~~~~~~~l~~~~~~~~~~~iGE~Gld~~~-~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~  134 (264)
T 1xwy_A           74 QAATEEAIIELAAQPEVVAIGECGLDFNR-NFSTPEEQERAFVAQLRIAADLNMPVFMHCRD  134 (264)
T ss_dssp             CHHHHHHHHHHHTSTTEEEEEEEEEETTT-CSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred             CHHHHHHHHHHhcCCCeEEEEEeccCCCC-CCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCC
Confidence             1245667777653 3444432 222210 0000 112346889999999999999999853

>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}

Probab=97.94  E-value=6.7e-05  Score=68.66  Aligned_cols=125  Identities=14%  Similarity=0.142  Sum_probs=72.1

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc------CceeEEeeeeeeC
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR------IYVDVGFWGGLVP  173 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~  173 (399)
                      +||+|+|+....+  .++.......|...||..++..+.       +.+......+.+...      .+..++++.....
T Consensus         3 ~iD~H~HL~~~~~--~~d~~~vl~~a~~~gV~~~v~~g~-------~~~~~~~~~~la~~~~~~~~~v~~~~GiHP~~~~   73 (287)
T 3rcm_A            3 LIDIGVNLTNSSF--HDQQAAIVERALEAGVTQMLLTGT-------SLAVSEQALELCQQLDASGAHLFATAGVHPHDAK   73 (287)
T ss_dssp             EEEEEECTTCGGG--TTCHHHHHHHHHHTTEEEEEECCC-------SHHHHHHHHHHHHHHCTTSSSEEEEECCCGGGGG
T ss_pred             eEEEeecCCchhc--ccCHHHHHHHHHHcCCeEEEEecC-------CHHHHHHHHHHHHhCCCCCceEEEEEEECcCccc
Confidence            8999999986533  235566678888999999886541       244444444443321      2222332221111


Q ss_pred             -CChhhHHHHHHHHHc-CCcEEEE-eecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          174 -ENAYNASALEALLNA-GVLGLKS-FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       174 -~~~~~~~~l~~l~~~-G~~~ik~-~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                       ...+..++++++++. .+.+|.- .+.+...........+.+++.++.|+++|+||.+|+.+
T Consensus        74 ~~~~~~~~~l~~l~~~~~vvaIGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~  136 (287)
T 3rcm_A           74 AWDTDSERQLRLLLSEPRVRAVGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERD  136 (287)
T ss_dssp             GCCTTHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred             cCCHHHHHHHHHHhcCCCeEEEEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence             122346778887754 3445532 23321100000123568889999999999999999965

>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}

Probab=97.91  E-value=7.9e-05  Score=68.78  Aligned_cols=126  Identities=15%  Similarity=0.099  Sum_probs=71.9

Q ss_pred             ceeecccccCCCCCCC--------cCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeee
Q 015826           99 GLIDVHAHLDDPGRTE--------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGG  170 (399)
Q Consensus        99 GlID~H~H~~~~~~~~--------~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (399)
                      .+||+|+|+..+.+..        ..+.......+.+.||++++....       +.+......+.+....  ++....+
T Consensus         2 ~~iD~H~Hl~~~~~~~~~~~~~~h~~d~~~vl~~~~~~GV~~~v~~~~-------~~~~~~~~~~la~~~~--~v~~~~G   72 (301)
T 2xio_A            2 KFIDIGINLTDPMFRGIYRGVQKHQDDLQDVIGRAVEIGVKKFMITGG-------NLQDSKDALHLAQTNG--MFFSTVG   72 (301)
T ss_dssp             CEEEEEECTTCGGGGTEETTEECSCCCHHHHHHHHHHHTEEEEEECCC-------SHHHHHHHHHHHTTCT--TEEEEEC
T ss_pred             eEEEEcCCCCChHhcccccccccCccCHHHHHHHHHHCCCCEEEEeCC-------CHHHHHHHHHHHHHCC--CEEEEEE
Confidence            5899999997654321        135556667788899999987641       2344444455544332  2222233


Q ss_pred             eeCCCh---------hhHHHHHHHHHc---CCcEEEE-eecCCCCCCCC-CCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          171 LVPENA---------YNASALEALLNA---GVLGLKS-FMCPSGINDFP-MTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       171 ~~~~~~---------~~~~~l~~l~~~---G~~~ik~-~~~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      +.+...         ...++++++++.   .+.+|+- .+.+.-....+ ....+.+++.++.|+++|+||.+|+.+
T Consensus        73 iHP~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~  149 (301)
T 2xio_A           73 CHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRN  149 (301)
T ss_dssp             CCGGGTHHHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEES
T ss_pred             ECcChhhhCcccccHHHHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecC
Confidence            433221         235667777663   3444432 22221000000 112367889999999999999999964

>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}

Probab=97.89  E-value=8.6e-05  Score=68.92  Aligned_cols=128  Identities=16%  Similarity=0.088  Sum_probs=73.8

Q ss_pred             ceeecccccCCCCCC--------CcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC---ceeEEe
Q 015826           99 GLIDVHAHLDDPGRT--------EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI---YVDVGF  167 (399)
Q Consensus        99 GlID~H~H~~~~~~~--------~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  167 (399)
                      -|||+|+|+..+.+.        ..++.......|...||..++....       +.+.....++.+....   ..++..
T Consensus        27 ~~iDtH~HL~~~~f~g~y~gk~~h~~d~~~vl~rA~~aGV~~ii~~g~-------~~~~~~~~~~La~~~~~~~~~~v~~   99 (325)
T 3ipw_A           27 QFIDIGANLTDDNYFGNYHGKHYHEEDIDVVLQRAERNGLSHIIITSG-------CLNDFKKAIEIINKYQNLTNIKLVT   99 (325)
T ss_dssp             CEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECCC-------SHHHHHHHHHHHHHHGGGCSSEEEE
T ss_pred             CeEEEEECCCchHhccccccccccccCHHHHHHHHHHcCCcEEEEccC-------CHHHHHHHHHHHHHCCCcccceEEE
Confidence            499999999876441        1356677778889999999886641       2444444444443221   002222


Q ss_pred             eeeeeCCC-----hh-hHHHHHHHHHc---CCcEEE-EeecCCCCCCCC-CCCHHHHHHHHHHHHh-cCCCEEEecCC
Q 015826          168 WGGLVPEN-----AY-NASALEALLNA---GVLGLK-SFMCPSGINDFP-MTNASHIKEGLSVLAR-YKRPLLVHAEM  233 (399)
Q Consensus       168 ~~~~~~~~-----~~-~~~~l~~l~~~---G~~~ik-~~~~~~~~~~~~-~~~~~~l~~~~~~a~~-~g~~v~~H~~~  233 (399)
                      ..|+.+..     .+ .+++++++++.   .+.+|. +.+.+.-....+ ....+.+++.++.|++ +++||.+|+++
T Consensus       100 ~~GiHP~~~~~~~~~~~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~  177 (325)
T 3ipw_A          100 TIGVHPTRTNELKQEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRK  177 (325)
T ss_dssp             EECCCGGGGGGGGSTTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEES
T ss_pred             EEEECcchhhcCCchHHHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCc
Confidence            22333321     12 46778787753   344442 223321000000 1124578888999999 99999999975

>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*

Probab=97.78  E-value=4.2e-05  Score=71.30  Aligned_cols=135  Identities=15%  Similarity=0.138  Sum_probs=76.3

Q ss_pred             ecceeecccccCCCCCCC-------c----------Cch-HHHHHHHHcCCeeeeecCcCCCCCCCC---cHH-------
Q 015826           97 MPGLIDVHAHLDDPGRTE-------W----------EGF-PSGTKAAAAGGITTLIDMPLNSDPSTI---STE-------  148 (399)
Q Consensus        97 lPGlID~H~H~~~~~~~~-------~----------e~~-~~~~~~al~~GvTtv~d~~~~~~~~~~---~~~-------  148 (399)
                      |+++||+|+|+..+.+..       .          .+. ....+.+-+.||...+..+.  .|...   ..+       
T Consensus         1 m~~~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~--~p~~~~~~d~~~~~~~~~   78 (327)
T 2dvt_A            1 MQGKVALEEHFAIPETLQDSAGFVPGDYWKELQHRLLDIQDTRLKLMDAHGIETMILSLN--APAVQAIPDRRKAIEIAR   78 (327)
T ss_dssp             CCSEEEEEEEECCHHHHGGGTTTSCSSHHHHHHHHHHCSSSHHHHHHHHTTEEEEEEEEC--SSGGGGCCCHHHHHHHHH
T ss_pred             CCCeEEEecccCCHHHHHHHhccCCcccccccchhcCChhHHHHHHhhhcCCcEEEEeCC--CCcccccCChHHHHHHHH
Confidence            678999999986542110       0          022 34456677899998776541  12110   111       


Q ss_pred             HHH-HHHHHHhccCceeEEeeeeeeCCCh-hhHHHHHHHHH-cCCcEEEEeecCCCC--CCCCCCCHHHHHHHHHHHHhc
Q 015826          149 TLK-LKVDAAEKRIYVDVGFWGGLVPENA-YNASALEALLN-AGVLGLKSFMCPSGI--NDFPMTNASHIKEGLSVLARY  223 (399)
Q Consensus       149 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~l~~-~G~~~ik~~~~~~~~--~~~~~~~~~~l~~~~~~a~~~  223 (399)
                      ... ...+....... .+...+++.+... ...++++++++ .|+.++++...+...  ......+++.+..+++.|+++
T Consensus        79 ~~n~~~~~~~~~~p~-r~~~~~~v~p~~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  157 (327)
T 2dvt_A           79 RANDVLAEECAKRPD-RFLAFAALPLQDPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKL  157 (327)
T ss_dssp             HHHHHHHHHHHHCTT-TEEEEECCCTTSHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhCCC-ceEEEeecCcCCHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHc
Confidence            111 11122221111 1222333444333 35788888875 599999876543200  001245667899999999999


Q ss_pred             CCCEEEecCCh
Q 015826          224 KRPLLVHAEME  234 (399)
Q Consensus       224 g~~v~~H~~~~  234 (399)
                      |++|.+|+.+.
T Consensus       158 ~lpv~iH~~~~  168 (327)
T 2dvt_A          158 DVPFYLHPRNP  168 (327)
T ss_dssp             TCCEEEECCCC
T ss_pred             CCeEEECCCCC
Confidence            99999998654

>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}

Probab=97.78  E-value=0.00062  Score=61.27  Aligned_cols=121  Identities=15%  Similarity=0.133  Sum_probs=62.9

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcH---HHHHHHHH----HHhccCceeEEeeeeee
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTIST---ETLKLKVD----AAEKRIYVDVGFWGGLV  172 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~  172 (399)
                      +||+|+|+....+       .....+...||+.++....+........   +.+...++    .+.... .++....|+.
T Consensus         2 ~iDtH~Hld~~~~-------~~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~-~~v~~~~GiH   73 (261)
T 3guw_A            2 YFDSHLHSEGLGF-------SELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAG-VKMHPAVGIH   73 (261)
T ss_dssp             CCBCCCCGGGCCH-------HHHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTT-CEECCBCCCC
T ss_pred             eEEeccCCCCCCh-------HHHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCC-CCEEEEEEEC
Confidence            7999999986432       2356778999999886652211111111   22222221    122211 1222222333


Q ss_pred             CCC--hhhHHHHHHHHHcCCcEEE-EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          173 PEN--AYNASALEALLNAGVLGLK-SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       173 ~~~--~~~~~~l~~l~~~G~~~ik-~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      |..  ....+.++.+.+..+.+|. +.+.+     ......+.+++.++.|+++|+||.+|++.
T Consensus        74 P~~~~~~~~~~~~~l~~~~vvaIGEiGLD~-----~~~~Q~~~f~~ql~lA~e~~lPv~iH~r~  132 (261)
T 3guw_A           74 PRCIPPDYEFVLGYLEEGEWVAFGEIGLEL-----VTDEEIEVLKSQLELAKRMDVPCIIHTPR  132 (261)
T ss_dssp             GGGCCTTTHHHHHHHTTSCCSCEEEEECSS-----CCHHHHHHHHHHHHHHHHHTCCEEEECCS
T ss_pred             cccccccHHHHHHHhCcCCeEEEEEecCCC-----ChHHHHHHHHHHHHHHHHhCCeEEEEcCC
Confidence            321  1112233333334555553 22322     11123457889999999999999999975

>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0

Probab=97.67  E-value=0.00019  Score=64.34  Aligned_cols=118  Identities=19%  Similarity=0.068  Sum_probs=65.1

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC----C
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE----N  175 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~  175 (399)
                      +||+|+|+...     ++.......+...||..++. .  +.     .+......+.+....  ++....|+.|.    .
T Consensus         3 liDtH~HL~~~-----~d~~~vl~~a~~~gV~~i~v-~--~~-----~~~~~~~~~la~~~~--~v~~~~GiHP~~~~~~   67 (254)
T 3gg7_A            3 LIDFHVHLDLY-----PDPVAVARACEERQLTVLSV-T--TT-----PAAWRGTLALAAGRP--HVWTALGFHPEVVSER   67 (254)
T ss_dssp             CEEEEECGGGS-----SSHHHHHHHHHHTTCEEEEC-C--SS-----GGGHHHHHGGGTTCT--TEEECBCCCGGGTTTT
T ss_pred             eEEEeeCCCCC-----CCHHHHHHHHHHCCCcEEEe-c--CC-----HHHHHHHHHHHHhCC--CeEEEEeeCccccccc
Confidence            89999999853     25555667788899987652 2  22     233333444433322  12222333332    2


Q ss_pred             hhhHHHHHHHHHcCCcEEE-EeecCCCCC-CCCCCCHHHHHHHHHHHHhcCCCEE-EecCC
Q 015826          176 AYNASALEALLNAGVLGLK-SFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLL-VHAEM  233 (399)
Q Consensus       176 ~~~~~~l~~l~~~G~~~ik-~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~-~H~~~  233 (399)
                      .+.++.+++++.. +..|. +.+.+.... .......+.+++.++.|+++++||. +|+++
T Consensus        68 ~~~l~~l~~~~~~-~vaIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~  127 (254)
T 3gg7_A           68 AADLPWFDRYLPE-TRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRR  127 (254)
T ss_dssp             GGGTHHHHHHGGG-CSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred             HHHHHHHHHHhhh-ccEEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCC
Confidence            2345666666642 34443 222221000 0001234568899999999999998 99975

>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}

Probab=97.53  E-value=0.002  Score=58.09  Aligned_cols=101  Identities=15%  Similarity=0.151  Sum_probs=63.4

Q ss_pred             hhHHHHHHHH-HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc-CCCEEEecCChhhchhHHhhccCcCCchhhh
Q 015826          177 YNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY-KRPLLVHAEMEKGSERHVKLEDDTLDTRSYS  254 (399)
Q Consensus       177 ~~~~~l~~l~-~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~-g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~  254 (399)
                      +..+++++++ +.|+.+++.+...    .  . ..+.+..+++.|+++ |++|.+|+..+..                  
T Consensus       102 ~~~~el~~~~~~~g~~gi~~~g~~----~--~-~~~~~~~~~~~a~~~~~lpv~iH~~~~~~------------------  156 (272)
T 3cjp_A          102 DTNSYIEENIVNNKLVGIGELTPA----S--G-QIKSLKPIFKYSMDSGSLPIWIHAFNPLV------------------  156 (272)
T ss_dssp             HHHHHHHHHTTTTTCSEEEEECCC----T--T-CGGGGHHHHHHHHHTTCCCEEECCSTTCC------------------
T ss_pred             HHHHHHHHHHHhcCceEEEecCCC----C--C-ccHHHHHHHHHHHhccCCcEEEeCCCCCc------------------
Confidence            4457777765 4689999864211    1  2 557899999999999 9999999964310                  


Q ss_pred             cCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccc
Q 015826          255 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCP  321 (399)
Q Consensus       255 ~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p  321 (399)
                                 ..+...+..++++.      ++.++.+.|.... ...+.++.+++. .+++++++.
T Consensus       157 -----------~~~~~~~~~~l~~~------p~l~iv~~H~G~~-~~~~~~~~~~~~-~~~y~~~s~  204 (272)
T 3cjp_A          157 -----------LQDIKEIAELCKAF------PKVPVILGHMGGS-NWMTAVELAKEI-QNLYLDTSA  204 (272)
T ss_dssp             -----------HHHHHHHHHHHHHS------TTSCEEEGGGGGG-GHHHHHHHHHHC-TTEEEECTT
T ss_pred             -----------cccHHHHHHHHHHC------CCceEEEECCCCc-cHHHHHHHHHhC-CCEEEEecc
Confidence                       01223445555553      4678888898765 333455444432 356666554

>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15

Probab=97.52  E-value=0.0003  Score=64.23  Aligned_cols=124  Identities=15%  Similarity=0.063  Sum_probs=72.8

Q ss_pred             ceeecccccCCCCC----------CCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEee
Q 015826           99 GLIDVHAHLDDPGR----------TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFW  168 (399)
Q Consensus        99 GlID~H~H~~~~~~----------~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (399)
                      ++||+|+|+..+.+          ....+.....+.+-+.||+..+..+.+... ..+. .+.+..+....+ .   ...
T Consensus        13 ~iID~H~Hl~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~-~~n~-~~~~~~~~~p~r-~---~~~   86 (288)
T 2ffi_A           13 TAIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLG-TDNR-YLLSALQTVPGQ-L---RGV   86 (288)
T ss_dssp             CCEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGT-TCCH-HHHHHHHHSTTT-B---CCB
T ss_pred             CceeecccccCCCCCCCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCcccc-ccHH-HHHHHHHHCCCC-E---EEE
Confidence            69999999975321          001234455566778999977655411111 1222 222222222111 1   111


Q ss_pred             eeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          169 GGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       169 ~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .++.+..  ..++++++.+.|+.++++.....+   ....+++.+..+++.|+++|++|.+|+..
T Consensus        87 ~~v~p~~--~~~el~~~~~~g~~Gi~~~~~~~~---~~~~~~~~~~~~~~~a~~~~lpv~iH~~~  146 (288)
T 2ffi_A           87 VMLERDV--EQATLAEMARLGVRGVRLNLMGQD---MPDLTGAQWRPLLERIGEQGWHVELHRQV  146 (288)
T ss_dssp             BCCCSSC--CHHHHHHHHTTTCCEEECCCSSSC---CCCTTSTTTHHHHHHHHHHTCEEEECSCT
T ss_pred             EEeCCCC--CHHHHHHHHHCCCeEEEEecccCC---CCCcccHHHHHHHHHHHHCCCeEEEeech
Confidence            2233322  246788888889999987654421   12345678999999999999999999864

>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12

Probab=97.47  E-value=0.0003  Score=63.63  Aligned_cols=123  Identities=15%  Similarity=0.126  Sum_probs=68.3

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCC----
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN----  175 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----  175 (399)
                      ++|+|+|+..+.+.  .+.......+-+.||+.++....       +.+..+...+.+.....  +....++.+..    
T Consensus        13 ~~~~~~hl~~~~~~--~~~~~~l~~~~~~GV~~~v~~~~-------~~~~~~~~~~l~~~~p~--i~~~~G~hP~~~~~~   81 (268)
T 1j6o_A           13 MVDTHAHLHFHQFD--DDRNAVISSFEENNIEFVVNVGV-------NLEDSKKSLDLSKTSDR--IFCSVGVHPHDAKEV   81 (268)
T ss_dssp             EEEEEECTTSGGGT--TTHHHHHHTTTTTTEEEEEEECS-------SHHHHHHHHHHHTTCTT--EEEEECCCGGGGGGC
T ss_pred             ccccccCCCChhhc--cCHHHHHHHHHHcCCCEEEEeCC-------CHHHHHHHHHHHHHCCC--EEEEEeecccccccc
Confidence            68999999865332  34555666777899999887651       13333444444433322  22222333321    


Q ss_pred             -hhhHHHHHHHHHc-CCcEEEE-eecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          176 -AYNASALEALLNA-GVLGLKS-FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       176 -~~~~~~l~~l~~~-G~~~ik~-~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                       .+..++++++++. .+.+++. .+.+...........+.+++.++.|+++|+||.+|+.+
T Consensus        82 ~~~~~~~l~~~~~~~~~~~iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~~  142 (268)
T 1j6o_A           82 PEDFIEHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIRD  142 (268)
T ss_dssp             CTTHHHHHHHHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred             CHHHHHHHHHHhccCCEEEEEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeCc
Confidence             2345667776643 1222221 11111000001235678899999999999999999853

>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}

Probab=97.27  E-value=0.0017  Score=58.17  Aligned_cols=123  Identities=17%  Similarity=0.242  Sum_probs=66.6

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCCh---
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA---  176 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  176 (399)
                      +||+|+|+....+  ..+.......+.+.||+.++..+.  .     ....+...+.......  +....++.+...   
T Consensus         2 ~iD~H~Hl~~~~~--~~~~~~~l~~~~~~Gv~~~v~~~~--~-----~~~~~~~~~~~~~~p~--~~~~~g~~P~~~~~~   70 (265)
T 2gzx_A            2 LIDTHVHLNDEQY--DDDLSEVITRAREAGVDRMFVVGF--N-----KSTIERAMKLIDEYDF--LYGIIGWHPVDAIDF   70 (265)
T ss_dssp             CEEEEECTTSGGG--TTTHHHHHHHHHHTTCCEEEEEEC--S-----HHHHHHHHHHHHHCTT--EEEEECCCGGGGGGC
T ss_pred             eEEEeeCCCCccc--ccCHHHHHHHHHHcCCCEEEEeCC--C-----HHHHHHHHHHHHhCCC--EEEEEEeccCccccC
Confidence            7999999976432  124455566777899998887652  1     2222333333322221  222223333211   


Q ss_pred             --hhHHHHHHHHHc-CCcEEEEe-ecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          177 --YNASALEALLNA-GVLGLKSF-MCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       177 --~~~~~l~~l~~~-G~~~ik~~-~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                        +..++++++++. ++.+++.. +.............+.+...++.|+++|++|.+|+..
T Consensus        71 ~~~~~~~l~~~~~~~~~~~iGe~Gl~~~~~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~  131 (265)
T 2gzx_A           71 TEEHLEWIESLAQHPKVIGIGEMGLDYHWDKSPADVQKEVFRKQIALAKRLKLPIIIHNRE  131 (265)
T ss_dssp             CHHHHHHHHHHTTSTTEEEEEEEEEECSCCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEES
T ss_pred             CHHHHHHHHHHhcCCCEEEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence              235666666543 33343321 1111000001235667999999999999999999853

>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}

Probab=97.22  E-value=0.0097  Score=56.14  Aligned_cols=111  Identities=13%  Similarity=0.153  Sum_probs=64.8

Q ss_pred             HHHHHHHHHHHHhc-CCCEEEec-CChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhh-ccCCCCC
Q 015826          210 ASHIKEGLSVLARY-KRPLLVHA-EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDT-RTDGPAE  286 (399)
Q Consensus       210 ~~~l~~~~~~a~~~-g~~v~~H~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~-~~~~~~~  286 (399)
                      .+.+++.++.|+++ |+||.+|+ ++.+.                                -.+.+++.++. +.    .
T Consensus       178 ~~~f~aq~~~A~~~~glPV~iH~~r~~~a--------------------------------~~e~l~iL~e~~~~----~  221 (365)
T 3rhg_A          178 KNSLRAAALAQNNNPYASMNIHMPGWQRR--------------------------------GDEVLDILLTEMGC----D  221 (365)
T ss_dssp             HHHHHHHHHHHTTCTTCEEEEECCTTSCC--------------------------------HHHHHHHHTTTTCC----C
T ss_pred             HHHHHHHHHHHHHhcCCcEEEECCCCCcC--------------------------------HHHHHHHHHhccCC----C
Confidence            45788889999999 99999997 53211                                12223444431 10    1


Q ss_pred             CceEEEEcCC-ChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCCh-hhHHHHHHHHhcCCcc-
Q 015826          287 GAHLHIVHLS-DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA-ANKEKLWEALMDGHID-  363 (399)
Q Consensus       287 g~~vhi~H~s-~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~-~~~~~l~~~l~~G~id-  363 (399)
                      ..++.+.|+. +. .+++..+++.+.|..+..+..-...     .++..+  .  .   .+. +.-+.|.+.++.|-.| 
T Consensus       222 ~~~vvi~H~~rs~-~~~e~a~~~l~~G~~I~~~g~g~~~-----tf~~~~--~--~---~~d~~~a~~l~~li~~g~~dr  288 (365)
T 3rhg_A          222 PAKISLAHSDPSG-KDIDYQCKMLDRGVWLEFDMIGLDI-----SFPKEG--A--A---PSVMDTVEAVATLIERGYGNQ  288 (365)
T ss_dssp             GGGEEESCCGGGT-TCHHHHHHHHHTTCEEEECCTTCCC-----BCSSSC--B--C---CCHHHHHHHHHHHHHTTCGGG
T ss_pred             CCceEEecCCCCC-CCHHHHHHHHhCCCEEEecCCCccc-----cccccc--c--c---cchHHHHHHHHHHHHhCCCCc
Confidence            1246778987 43 4677888888888766655321000     011111  0  1   123 2345788888888777 


Q ss_pred             -EEeCCC
Q 015826          364 -MLSSDH  369 (399)
Q Consensus       364 -~i~sdh  369 (399)
                       ++.||-
T Consensus       289 illeTD~  295 (365)
T 3rhg_A          289 IVLSHDV  295 (365)
T ss_dssp             EEECCCC
T ss_pred             EEEeCCC
Confidence             678885

>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15

Probab=97.20  E-value=0.00086  Score=61.65  Aligned_cols=128  Identities=13%  Similarity=0.048  Sum_probs=73.2

Q ss_pred             eeecccccCCCCCC----------------CcCchHHHHHHHHcCCeeeeecCcCCCCCC--CCcHH-------HHHH-H
Q 015826          100 LIDVHAHLDDPGRT----------------EWEGFPSGTKAAAAGGITTLIDMPLNSDPS--TISTE-------TLKL-K  153 (399)
Q Consensus       100 lID~H~H~~~~~~~----------------~~e~~~~~~~~al~~GvTtv~d~~~~~~~~--~~~~~-------~~~~-~  153 (399)
                      +||+|+|+..+.+.                ...+.....+.+-+.||+..+..+.  .|.  ....+       .... .
T Consensus         3 ~ID~H~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~--~~~~~~~~~~~~~~~~~~~n~~~   80 (307)
T 2f6k_A            3 KIDFHTHYLPTSYVEALKRHVPGDPDGWPTPEWTPQLTLNFMRDNDISYSILSLS--SPHVNFGDKAETIRLVEAANDDG   80 (307)
T ss_dssp             EEEEEEECCCHHHHHHHHHHCCSSGGGSCCCCCCHHHHHHHHHHTTEEEEEEECC--SSCSCSSCHHHHHHHHHHHHHHH
T ss_pred             eEEEecCcCCHHHHHHHHHhccCCcccCcCCCCCHHHHHHHHHHcCCCEEEEeCC--CcccccCCHHHHHHHHHHHHHHH
Confidence            79999998653210                0134455566778899999765541  111  01110       1111 1


Q ss_pred             HHHHhccCceeEEeeeeeeCCC-hhhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec
Q 015826          154 VDAAEKRIYVDVGFWGGLVPEN-AYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA  231 (399)
Q Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~  231 (399)
                      .+....... .+...+.+.... ....++++++++ .|+.++++...+.+    ...+++.+..+++.|+++|++|.+|+
T Consensus        81 ~~~~~~~p~-r~~~~~~~p~~~~~~~~~el~~~~~~~g~~gi~~~~~~~~----~~~~~~~~~~~~~~a~~~~lpv~iH~  155 (307)
T 2f6k_A           81 KSLAQQYPD-QLGYLASLPIPYELDAVKTVQQALDQDGALGVTVPTNSRG----LYFGSPVLERVYQELDARQAIVALHP  155 (307)
T ss_dssp             HHHHHHCTT-TEEEEECCCTTCHHHHHHHHHHHHHTSCCSEEEEESEETT----EETTCGGGHHHHHHHHTTTCEEEEEC
T ss_pred             HHHHHhCcc-ceeEEEeCCCCCHHHHHHHHHHHHhccCCcEEEEeccCCC----CCCCcHhHHHHHHHHHHcCCeEEECC
Confidence            122221111 122222222122 345788888885 69999987654321    12455789999999999999999999


Q ss_pred             CCh
Q 015826          232 EME  234 (399)
Q Consensus       232 ~~~  234 (399)
                      ...
T Consensus       156 ~~~  158 (307)
T 2f6k_A          156 NEP  158 (307)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            754

>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A

Probab=97.09  E-value=0.0017  Score=59.74  Aligned_cols=152  Identities=11%  Similarity=0.038  Sum_probs=86.6

Q ss_pred             eeecccccCCCC---CC----C------cCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEE
Q 015826          100 LIDVHAHLDDPG---RT----E------WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVG  166 (399)
Q Consensus       100 lID~H~H~~~~~---~~----~------~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (399)
                      .||+|+|+..+.   +.    .      .-+.......+-..||+.++.....  .   .....+...+.++....+ ++
T Consensus         5 ~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~~~--~---~~~~n~~l~~la~~~p~~-~g   78 (303)
T 4do7_A            5 RIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQAR--A---GRDETAFLLELACDEARI-AA   78 (303)
T ss_dssp             CEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEECCS--S---SHHHHHHHHHHHTTCTTE-EE
T ss_pred             EEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEccC--C---cHHHHHHHHHHHHhCCCe-EE
Confidence            499999997542   10    0      1123344556678899987765421  1   122223333333332211 12


Q ss_pred             eeeeeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCC-CCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhcc
Q 015826          167 FWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFP-MTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLED  245 (399)
Q Consensus       167 ~~~~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~-~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~  245 (399)
                      +.+.+.+..++..++++++.+.|+.+|+.......  ... ..+++.+...++.++++|+++.+|+....          
T Consensus        79 ~vg~v~~~~~~~~~~L~~l~~~gv~Gir~~~~~~~--~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~~----------  146 (303)
T 4do7_A           79 VVGWEDLRAPQLAERVAEWRGTKLRGFRHQLQDEA--DVRAFVDDADFARGVAWLQANDYVYDVLVFERQ----------  146 (303)
T ss_dssp             EEECCCTTCTTHHHHHTTCCSSCEEEEECCGGGSS--CHHHHHHCHHHHHHHHHHHHTTCEEEECCCGGG----------
T ss_pred             EEEEeCCCCchHHHHHHHHhhcCceEEEecCcCCC--CccccccCHHHHHHHHHHHHCCCeEEEecCHHH----------
Confidence            21212233333556777766678888886533210  000 24456889999999999999999986432          


Q ss_pred             CcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh
Q 015826          246 DTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA  298 (399)
Q Consensus       246 ~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~  298 (399)
                                             +..+..++++      .+++++.+.|+...
T Consensus       147 -----------------------l~~l~~ll~~------~P~l~iVi~H~G~p  170 (303)
T 4do7_A          147 -----------------------LPDVQAFCAR------HDAHWLVLDHAGKP  170 (303)
T ss_dssp             -----------------------HHHHHHHHHH------CCSSCEEEGGGGCC
T ss_pred             -----------------------HHHHHHHHHH------CCCCCEEEeCCCCC
Confidence                                   1234456665      35799999998753

>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*

Probab=97.03  E-value=0.017  Score=54.25  Aligned_cols=109  Identities=17%  Similarity=0.184  Sum_probs=64.5

Q ss_pred             CHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCc
Q 015826          209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA  288 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~  288 (399)
                      ..+.+++.++++++.|+|+.+|++....                               +... +.+.++.+    ...-
T Consensus       191 E~k~frA~a~aa~etG~Pv~iHt~~~~~-------------------------------~~e~-l~iL~eeG----~~~~  234 (360)
T 3tn4_A          191 EKMFFRAAARAQKETGAVIITHTQEGTM-------------------------------GPEQ-AAYLLEHG----ADPK  234 (360)
T ss_dssp             HHHHHHHHHHHHHHHCCEEEEECSTTCC-------------------------------HHHH-HHHHHHTT----CCGG
T ss_pred             HHHHHHHHHHHHHHhCCcEEEEcCcccC-------------------------------CHHH-HHHHHHcC----CCCC
Confidence            4457899999999999999999865321                               0111 12222220    0123


Q ss_pred             eEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCcc--EEe
Q 015826          289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLS  366 (399)
Q Consensus       289 ~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id--~i~  366 (399)
                      ++.+.|+... .+.+..+++-+.|..+..+..-.      +     + .. -.|  .+.+..+.|.+.++.|-.|  .++
T Consensus       235 ~vvi~H~~~~-~d~~~~~~~l~~G~yl~fD~iG~------~-----~-~~-~~p--~d~~r~~~l~~lv~~g~~drILLs  298 (360)
T 3tn4_A          235 KIVIGHMCDN-TDPDYHRKTLAYGVYIAFDRFGI------Q-----G-MV-GAP--TDEERVRTLLALLRDGYEKQIMLS  298 (360)
T ss_dssp             GEEECCGGGC-CCHHHHHHHHTTTCEEEECCTTC------C-----C-ST-TCC--CHHHHHHHHHHHHHTTCGGGEEEC
T ss_pred             ceEEEcCCCC-CCHHHHHHHHHcCCEEEEccccc------c-----c-cc-CCC--ChHHHHHHHHHHHHhcCcceEEEe
Confidence            5789996433 46778888888887666653210      0     0 00 012  1233346678888888877  778


Q ss_pred             CCC
Q 015826          367 SDH  369 (399)
Q Consensus       367 sdh  369 (399)
                      +|-
T Consensus       299 tDa  301 (360)
T 3tn4_A          299 HDT  301 (360)
T ss_dssp             CCC
T ss_pred             cCC
Confidence            884

>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0

Probab=96.96  E-value=0.0092  Score=55.46  Aligned_cols=105  Identities=17%  Similarity=0.227  Sum_probs=61.7

Q ss_pred             CHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCc
Q 015826          209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA  288 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~  288 (399)
                      ..+.+++.++.|+++|+||.+|+++...                               +.. .+++.++.+.    ...
T Consensus       166 q~~~f~aq~~~A~~~glPViiH~r~g~~-------------------------------a~~-~l~iL~e~~~----~~~  209 (330)
T 3pnz_A          166 EEKTIRAVARAHHETKAPIHSHTEAGTM-------------------------------ALE-QIEILKQENI----PLE  209 (330)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEECGGGCC-------------------------------HHH-HHHHHHHTTC----CGG
T ss_pred             HHHHHHHHHHHHHHHCCeEEEeCCCCcC-------------------------------hHH-HHHHHHHcCC----CCC
Confidence            4567888999999999999999964210                               111 1334443210    123


Q ss_pred             eEEEEcCC-ChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCcc--EE
Q 015826          289 HLHIVHLS-DASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--ML  365 (399)
Q Consensus       289 ~vhi~H~s-~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id--~i  365 (399)
                      ++.+.|+. +  .+++..+++-+.|..+..+...              + ++ .+|  +.+..+.+.+.++.|-.|  .+
T Consensus       210 ~vvi~H~~~s--~~~e~a~~~l~~G~~i~~~g~~--------------t-~~-~~~--~~~~~~~l~~lv~~g~~drill  269 (330)
T 3pnz_A          210 YLSIGHMDRN--LDPYYHKQVAKTGAFMSFDGIA--------------K-IK-YAP--ESARIAAILYLVSEGFEDQILV  269 (330)
T ss_dssp             GEEETTGGGS--CCHHHHHHHHTTTCEEEECCTT--------------C-TT-TCC--HHHHHHHHHHHHHTTCGGGEEE
T ss_pred             eEEEecCCCC--CCHHHHHHHHHcCcEEEEccCc--------------c-cC-CCC--hHHHHHHHHHHHHcCCCCeEEE
Confidence            46778985 4  3567777777788655554221              0 00 011  122335677778888777  77


Q ss_pred             eCCC
Q 015826          366 SSDH  369 (399)
Q Consensus       366 ~sdh  369 (399)
                      .||-
T Consensus       270 eTD~  273 (330)
T 3pnz_A          270 SGDT  273 (330)
T ss_dssp             CCCC
T ss_pred             eCCC
Confidence            7885

>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*

Probab=96.85  E-value=0.023  Score=52.95  Aligned_cols=213  Identities=17%  Similarity=0.201  Sum_probs=107.8

Q ss_pred             ceeecccccCC--CCCC------CcC---c---hHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCcee
Q 015826           99 GLIDVHAHLDD--PGRT------EWE---G---FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD  164 (399)
Q Consensus        99 GlID~H~H~~~--~~~~------~~e---~---~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (399)
                      |++.+|=|+..  ++..      .+.   +   .....+.+.+.||+++++.. . .....+.+.+.+..+......++.
T Consensus        32 G~t~~HEHl~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~a~~aGv~tiV~~~-~-~~~~r~~~~l~~la~~~g~~i~~~  109 (339)
T 3gtx_A           32 GATLPHEHVIFGYPGYAGDVTLGPFDHAAALASCTETARALLARGIQTVVDAT-P-NGCGRNPAFLREVSEATGLQILCA  109 (339)
T ss_dssp             CEEEEEEEEEECCTTGGGGTTTSCCCHHHHHHHHHHHHHHHHHTTEEEEEECC-C-TTTTCCHHHHHHHHHHHCCEEECE
T ss_pred             CCeeeccCeeccCcccccCCCccccchHHHHHHHHHHHHHHHHhCCCeEEecC-C-CccCcCHHHHHHHHHHcCCcEEEE
Confidence            88899988742  2211      111   1   22345667899999999875 1 111234555544433221112222


Q ss_pred             EEeeeee-----eCC-C---hhhHHHHHHHHH----cC-------CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 015826          165 VGFWGGL-----VPE-N---AYNASALEALLN----AG-------VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYK  224 (399)
Q Consensus       165 ~~~~~~~-----~~~-~---~~~~~~l~~l~~----~G-------~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g  224 (399)
                      .+++..-     .+. .   ....+++.+++.    .|       +..+++.+++..   ......+.+++.++.|+++|
T Consensus       110 tG~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~gIg~tg~k~g~IEigld~~~---~~~~q~~~f~aq~~lA~~~g  186 (339)
T 3gtx_A          110 TGFYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTEGIAGTGIRAGVIKLASSRDA---ITPYEQLFFRAAARVQRETG  186 (339)
T ss_dssp             ECCCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHTCSTTSSCCCSEEEEECCSSC---CCHHHHHHHHHHHHHHHHHC
T ss_pred             cCCCccCccCCcCCcccccccCCHHHHHHHHHHHHHhcccccCcccceEEEEcCCCC---CCHHHHHHHHHHHHHHHHHC
Confidence            3332210     000 0   012345544432    11       123366555421   11123457888899999999


Q ss_pred             CCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHH
Q 015826          225 RPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDL  304 (399)
Q Consensus       225 ~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~  304 (399)
                      +||.+|+.....                               +.. .+++.++.+.    ...++.+.|+... .+++.
T Consensus       187 lPViiH~~~gr~-------------------------------a~~-~~~iL~~~~~----~~~~~vi~H~~~~-~~~e~  229 (339)
T 3gtx_A          187 VPIITHTQEGQQ-------------------------------GPQ-QAELLTSLGA----DPARIMIGHMDGN-TDPAY  229 (339)
T ss_dssp             CCEEEECSTTCC-------------------------------HHH-HHHHHHHTTC----CGGGEEECCGGGC-CCHHH
T ss_pred             CeEEEeCCCCcC-------------------------------HHH-HHHHHHHcCC----CcccEEEEccCCC-CCHHH
Confidence            999999943110                               111 2344444310    1234667898622 35777


Q ss_pred             HHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCCh-hhHHHHHHHHhcCCcc--EEeCCC
Q 015826          305 LMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA-ANKEKLWEALMDGHID--MLSSDH  369 (399)
Q Consensus       305 i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~-~~~~~l~~~l~~G~id--~i~sdh  369 (399)
                      .+++-+.|..+..+..-      +..+.  +     .|   +. ..-+.+.+.++.|-.|  ++.||-
T Consensus       230 a~~~l~~G~~i~~~g~~------t~~~~--~-----~p---~~~~~~~~l~~li~~~~~drilleTD~  281 (339)
T 3gtx_A          230 HRETLRHGVSIAFDRIG------LQGMV--G-----TP---TDAERLSVLTTLLGEGYADRLLLSHDS  281 (339)
T ss_dssp             HHHHHTTTCEEEECCTT------CCSST--T-----CC---CHHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred             HHHHHHcCcEEEEccCc------ccccc--C-----CC---chHHHHHHHHHHHHhcCCCeEEEecCC
Confidence            77777788766554321      00000  0     11   22 3445678888888777  778885

>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*

Probab=96.80  E-value=0.026  Score=53.12  Aligned_cols=212  Identities=15%  Similarity=0.129  Sum_probs=107.1

Q ss_pred             ceeecccccCCCCC-----------CCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhc-c--Ccee
Q 015826           99 GLIDVHAHLDDPGR-----------TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEK-R--IYVD  164 (399)
Q Consensus        99 GlID~H~H~~~~~~-----------~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~  164 (399)
                      |++.+|=|+.....           ...+......+...+.|++|++++. . .....+...+.+..+...+ .  ..+.
T Consensus        21 G~tl~HEHl~~~~~~~~~~~~~~~l~d~~~~~~el~~~~~~G~~tiVd~t-~-~~~GRd~~~l~~is~~t~~~Gv~Iv~~   98 (363)
T 3ovg_A           21 GITDCHDHFIKNGGPEVEEHIDFLMLNVDASIKEFKEFIDRGGSTIVTMD-P-PNVGRDVLKTLEIANAVKNLGGNVIMS   98 (363)
T ss_dssp             CEEEEEECSCBCSSHHHHHCGGGCBCCHHHHHHHHHHHHHTTEEEEEECC-C-TTTTCCHHHHHHHHHHHGGGTCEEEEE
T ss_pred             CCceeccceeccCChhhccCCcccccCHHHHHHHHHHHHHhCCCeEEEeC-C-CccCCCHHHHHHHHHhcccCCcEEEEe
Confidence            88888988854211           0112222344556689999999986 2 2233456666655554321 1  1122


Q ss_pred             EEeeeee-eCCChh-----hHHHHHHHH----HcCCc-----------------EEEEeecCCCCCCCCCCCHHHHHHHH
Q 015826          165 VGFWGGL-VPENAY-----NASALEALL----NAGVL-----------------GLKSFMCPSGINDFPMTNASHIKEGL  217 (399)
Q Consensus       165 ~~~~~~~-~~~~~~-----~~~~l~~l~----~~G~~-----------------~ik~~~~~~~~~~~~~~~~~~l~~~~  217 (399)
                      -+++... .+..+.     ..+++.+++    ..|+.                 .+|+..++..   ......+.+++.+
T Consensus        99 TG~y~~~~~~~~~~~~~~~~~e~l~~~~~~ei~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~~---~t~~Q~~~f~aq~  175 (363)
T 3ovg_A           99 TGFHKAKFYDKYSSWLAVVPTEEIVKMCVAEIEEGMDEYNYNGPVVKRSKAKAGIIKAGTGYGA---IDRLELKALEVAA  175 (363)
T ss_dssp             EECCCGGGSCTTTSHHHHSCHHHHHHHHHHHHHTCCBTTTTSSSCCCBCSCCCCEEEEEEEETB---EEHHHHHHHHHHH
T ss_pred             CCCCcCcccccCcHhhhcCCHHHHHHHHHHHHHhcccccccccccccCCCccCCEEEEEeCCCC---CCHHHHHHHHHHH
Confidence            2222110 000011     123333222    23432                 2455443321   0112455788899


Q ss_pred             HHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCC
Q 015826          218 SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD  297 (399)
Q Consensus       218 ~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~  297 (399)
                      +.|+++|+||.+|++....                               +. +.+++.++.+.    ...++.+.|+.+
T Consensus       176 ~~A~e~glPViiH~r~gr~-------------------------------a~-d~l~iL~e~g~----~~~~vvi~H~~~  219 (363)
T 3ovg_A          176 RTSILTGCPILVHTQLGTM-------------------------------AL-EVAKHLIGFGA----NPDKIQISHLNK  219 (363)
T ss_dssp             HHHHHHCCCEEEEEETTCS-------------------------------HH-HHHHHHHHHTC----CGGGEEEECGGG
T ss_pred             HHHHHhCCEEEEeCCCCCC-------------------------------HH-HHHHHHHhcCC----CCCcEEEEcCCC
Confidence            9999999999999864210                               11 23344443310    123577889874


Q ss_pred             hhHHHHHHHHHH-HCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCcc--EEeCCCC
Q 015826          298 ASSSLDLLMEAK-TNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSSDHS  370 (399)
Q Consensus       298 ~~~~l~~i~~ak-~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id--~i~sdh~  370 (399)
                      . .+++..+++- +.|..+..+....   +        . +   .|   +.+.-+.|.+.++.|-.|  .+.||--
T Consensus       220 ~-~~~~~a~~~l~~~G~yI~f~g~~~---~--------~-~---~~---~~~ra~~l~~lv~~~p~drILleTDap  276 (363)
T 3ovg_A          220 N-PDKYYYEKVIKETGVTLCFDGPDR---V--------K-Y---YP---DSLLAENIKYLVDKGLQKHITLSLDAG  276 (363)
T ss_dssp             S-CCHHHHHHHHHHHCCEEEECCTTC---T--------T-T---CC---HHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred             C-CCHHHHHHHHHHCCcEEEECCeec---c--------c-c---CC---hhHHHHHHHHHHHhcCCCeEEEeCCCC
Confidence            3 3455555555 6676655552210   0        0 0   11   122345788888888777  7788853

>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A

Probab=96.74  E-value=0.009  Score=55.60  Aligned_cols=54  Identities=19%  Similarity=0.126  Sum_probs=43.0

Q ss_pred             hhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          177 YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       177 ~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      ...++++++++.|+.++++.....+    ...+++.+..+++.++++|++|.+|+...
T Consensus       128 ~a~~el~~~~~~g~~Gv~l~~~~~~----~~l~d~~~~p~~~~~~e~~lpv~iH~~~~  181 (334)
T 2hbv_A          128 LACKEASRAVAAGHLGIQIGNHLGD----KDLDDATLEAFLTHCANEDIPILVHPWDM  181 (334)
T ss_dssp             HHHHHHHHHHHHTCCCEEEESCBTT----BCTTSHHHHHHHHHHHHTTCCEEEECCSC
T ss_pred             HHHHHHHHHHHcCCeEEEECCCCCC----CCCCcHHHHHHHHHHHHCCCEEEECCCCC
Confidence            4568888888889999987654322    24567899999999999999999999753

>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}

Probab=96.52  E-value=0.014  Score=55.38  Aligned_cols=40  Identities=15%  Similarity=0.067  Sum_probs=30.5

Q ss_pred             cceeecccccCCCCCC--------CcCchHHHHHHHHcCCeeeeecCc
Q 015826           98 PGLIDVHAHLDDPGRT--------EWEGFPSGTKAAAAGGITTLIDMP  137 (399)
Q Consensus        98 PGlID~H~H~~~~~~~--------~~e~~~~~~~~al~~GvTtv~d~~  137 (399)
                      +-|||+|+|+..+.+.        ..+++......|...||+.++..+
T Consensus        12 ~~~iDih~nL~d~~f~g~y~~~~~h~~D~~~vl~rA~~~GV~~ii~~g   59 (401)
T 3e2v_A           12 LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTG   59 (401)
T ss_dssp             CCEEEEEECTTSGGGGTEETTEECSCCCHHHHHHHHHHTTEEEEEECC
T ss_pred             CCeEEEEeCcCcHHHhhhccccccCccCHHHHHHHHHHCCCCEEEEec
Confidence            4699999999876442        135677778888999999988654

>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}

Probab=96.36  E-value=0.06  Score=50.66  Aligned_cols=115  Identities=14%  Similarity=0.144  Sum_probs=64.6

Q ss_pred             CHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCc
Q 015826          209 NASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGA  288 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~  288 (399)
                      ..+.+++.++.|+++|+||.+|+.....                               +-.+.+++.++.+.    ...
T Consensus       188 q~~~f~aq~~~A~~~glPV~iH~~gr~~-------------------------------a~~e~l~iL~e~g~----~~~  232 (364)
T 3k2g_A          188 EEKSLRGAARAQVRTGLPLMVHLPGWFR-------------------------------LAHRVLDLVEEEGA----DLR  232 (364)
T ss_dssp             HHHHHHHHHHHHHHHCCCEEEECCTTSC-------------------------------CHHHHHHHHHHTTC----CGG
T ss_pred             HHHHHHHHHHHHHHHCCeEEEecCCCCc-------------------------------cHHHHHHHHHHcCC----CCC
Confidence            3457888899999999999999842110                               00122334443210    112


Q ss_pred             eEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCCh-hhHHHHHHHHhcCCcc--EE
Q 015826          289 HLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDA-ANKEKLWEALMDGHID--ML  365 (399)
Q Consensus       289 ~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~-~~~~~l~~~l~~G~id--~i  365 (399)
                      ++.+.|+.....+++..+++.+.|..+..+..-.     ...++..+  . ..|   +. +.-+.|.+.++.|-.|  ++
T Consensus       233 ~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~gt-----~~~f~~~~--~-~~~---~d~~ra~~l~~lv~~gp~drill  301 (364)
T 3k2g_A          233 HTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIGM-----DFFYADQG--V-QCP---SDDEVARAILGLADHGYLDRILL  301 (364)
T ss_dssp             GEEECCCGGGTTCHHHHHHHHHHTCEEEECCTTC-----CCEETTTT--E-ECC---CHHHHHHHHHHHHHTTCGGGEEE
T ss_pred             ceEEECCCCCCCCHHHHHHHHhCCcEEEecCCcc-----cccccccc--c-ccc---cHHHHHHHHHHHHHhCCcccEEE
Confidence            4667798732026788888878887666553210     00011100  0 012   22 2346788888888777  78


Q ss_pred             eCCC
Q 015826          366 SSDH  369 (399)
Q Consensus       366 ~sdh  369 (399)
                      .||-
T Consensus       302 eTD~  305 (364)
T 3k2g_A          302 SHDV  305 (364)
T ss_dssp             CCCC
T ss_pred             eCCC
Confidence            8885

>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}

Probab=96.31  E-value=0.0095  Score=55.46  Aligned_cols=53  Identities=19%  Similarity=0.109  Sum_probs=41.5

Q ss_pred             hhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          177 YNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       177 ~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ...++++++++ .|+.++++.....+    ...+++.+..+++.|+++|++|.+|+..
T Consensus       124 ~a~~el~~~~~~~g~~Gv~l~~~~~~----~~l~d~~~~~~~~~~~e~~lpv~iH~~~  177 (336)
T 2wm1_A          124 LAVKEMERCVKELGFPGVQIGTHVNE----WDLNAQELFPVYAAAERLKCSLFVHPWD  177 (336)
T ss_dssp             HHHHHHHHHHHTSCCSEEEEESEETT----EETTCGGGHHHHHHHHHHTCEEEEECCS
T ss_pred             HHHHHHHHHHHccCCeEEEECCcCCC----CCCCCccHHHHHHHHHHcCCEEEECCCC
Confidence            45788888885 69999987544321    2356678999999999999999999975

>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A

Probab=95.97  E-value=0.3  Score=44.26  Aligned_cols=164  Identities=12%  Similarity=0.061  Sum_probs=90.9

Q ss_pred             hHHHHHHHHcCCeeeeecCcCCCCCCC--CcHHHHHHHHHHHhccCceeEEeeeeeeCCC-hhhHHHHHHHHHcCCcEEE
Q 015826          118 FPSGTKAAAAGGITTLIDMPLNSDPST--ISTETLKLKVDAAEKRIYVDVGFWGGLVPEN-AYNASALEALLNAGVLGLK  194 (399)
Q Consensus       118 ~~~~~~~al~~GvTtv~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~l~~~G~~~ik  194 (399)
                      .......+-+.||+..+..+... +..  ...+.+.+..+....+    +....++.+.. ....++++++.+.|+.+++
T Consensus        49 ~e~~l~~md~~GV~~~V~~~~~~-~~~~~~~N~~~~~~~~~~p~r----~~~~~~v~p~~~~~a~~eL~~~~~~g~~Gi~  123 (291)
T 3irs_A           49 LELMFEEMAAAGIEQGVCVGRNS-SVLGSVSNADVAAVAKAYPDK----FHPVGSIEAATRKEAMAQMQEILDLGIRIVN  123 (291)
T ss_dssp             HHHHHHHHHHTTCCEEEEECCEE-TTTEECCHHHHHHHHHHSTTT----EEEEEECCCSSHHHHHHHHHHHHHTTCCCEE
T ss_pred             HHHHHHHHHHCCCCEEEEcCCCc-cccccccHHHHHHHHHHCCCc----EEEEEecCccCHHHHHHHHHHHHhCCCeEEE
Confidence            34445667789999877665221 110  1223333333322211    22223344433 3456788886678999999


Q ss_pred             EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHH
Q 015826          195 SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLT  274 (399)
Q Consensus       195 ~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~  274 (399)
                      ......+. + ...+++.+..+++.|+++|++|.+|+.+....            ...+     +.|        ..+..
T Consensus       124 ~~~~~~~~-~-~~~~d~~~~~~~~~a~e~glpv~iH~~~~~~~------------~~~~-----~~p--------~~~~~  176 (291)
T 3irs_A          124 LEPGVWAT-P-MHVDDRRLYPLYAFCEDNGIPVIMMTGGNAGP------------DITY-----TNP--------EHIDR  176 (291)
T ss_dssp             ECGGGSSS-C-CCTTCGGGHHHHHHHHHTTCCEEEECSSSCSS------------SGGG-----GCH--------HHHHH
T ss_pred             EeCCCCCC-C-CCCCCHHHHHHHHHHHHcCCeEEEeCCCCCCC------------CCcc-----CCH--------HHHHH
Confidence            86433210 1 13466789999999999999999999653100            0000     011        12344


Q ss_pred             HHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccc
Q 015826          275 VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCP  321 (399)
Q Consensus       275 ~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p  321 (399)
                      ++++      +.+.++.+.|.... ...++++.+++. -+++++++-
T Consensus       177 v~~~------~P~l~ivl~H~G~~-~~~~~~~l~~~~-~nvy~~~Sg  215 (291)
T 3irs_A          177 VLGD------FPDLTVVSSHGNWP-WVQEIIHVAFRR-PNLYLSPDM  215 (291)
T ss_dssp             HHHH------CTTCCEEEEGGGTT-CHHHHHHHHHHC-TTEEEECGG
T ss_pred             HHHH------CCCCEEEeecCCcc-cHHHHHHHHhHC-CCeEecHHH
Confidence            5555      35788999998765 444555544322 256666554

>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A

Probab=95.50  E-value=0.22  Score=46.97  Aligned_cols=24  Identities=29%  Similarity=0.243  Sum_probs=21.6

Q ss_pred             HHHHHHHHHHHHhcCCCEEEecCC
Q 015826          210 ASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       210 ~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .+.++++++.|+++|+++.+|+..
T Consensus       214 ~~~~~~~~~~A~~~gl~~~~HagE  237 (371)
T 2pgf_A          214 LKEYKEIFDYVRESGVPLSVHAGE  237 (371)
T ss_dssp             GGGGHHHHHHHHHTTCCBEEEESC
T ss_pred             HHHHHHHHHHHHHcCCcEEEeeCC
Confidence            678999999999999999999853

>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}

Probab=95.39  E-value=0.066  Score=50.28  Aligned_cols=54  Identities=11%  Similarity=0.113  Sum_probs=42.3

Q ss_pred             hhHHHHHHHH-HcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          177 YNASALEALL-NAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       177 ~~~~~l~~l~-~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      ...+++++++ +.|+.++++...+.+    ...+++.+..+++.+.++|++|.+|+...
T Consensus       142 ~a~~El~r~~~~~G~~Gv~l~~~~~~----~~~~d~~~~p~~~~~~e~g~pV~iH~g~~  196 (357)
T 3nur_A          142 AAAREFERCINDLGFKGALIMGRAQD----GFLDQDKYDIIFKTAENLDVPIYLHPAPV  196 (357)
T ss_dssp             HHHHHHHHHHHTTCCCCEEEESCBTT----BCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred             HHHHHHHHHHhhcCceEEEeCCCCCC----CCCCCccHHHHHHHHHhcCCeEEEecCCC
Confidence            4678899976 589999998743321    23567889999999999999999998654

>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}

Probab=94.88  E-value=0.03  Score=51.63  Aligned_cols=53  Identities=15%  Similarity=0.278  Sum_probs=41.4

Q ss_pred             hhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          177 YNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       177 ~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ...++++++++ .|..+++++....+    ...+++.+..+++.+.++|++|.+|+..
T Consensus       111 ~a~~el~r~~~~~G~~Gv~l~~~~~~----~~l~d~~~~p~~~~~~e~g~pv~iH~g~  164 (312)
T 3ij6_A          111 SACKVISSIKDDENLVGAQIFTRHLG----KSIADKEFRPVLAQAAKLHVPLWMHPVF  164 (312)
T ss_dssp             HHHHHHHHHHHCTTEEEEEEESEETT----EETTSTTTHHHHHHHHHTTCCEEEECCC
T ss_pred             HHHHHHHHHHHhCCCceEeccCCCCC----CCCCCccHHHHHHHHHHcCCeEEEcCCC
Confidence            35788999875 79999998644321    2356678999999999999999999854

>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*

Probab=94.55  E-value=0.17  Score=46.70  Aligned_cols=40  Identities=8%  Similarity=-0.095  Sum_probs=29.4

Q ss_pred             cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .++.+|.+.-...      ..+.+.+.++++.|+++|+++.+|+..
T Consensus       160 ~~vvG~dL~g~E~------~~~~~~~~~~~~~A~~~gl~~~~HagE  199 (326)
T 3pao_A          160 DAFIAVGLDSSEV------GHPPSKFQRVFDRARSEGFLTVAHAGE  199 (326)
T ss_dssp             GGCSEEEEESCCT------TCCGGGGHHHHHHHHHTTCEECEEESS
T ss_pred             ccceeeCCCCCCC------CCCHHHHHHHHHHHHHcCCceeeecCC
Confidence            4677776642221      235678899999999999999999843

>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...

Probab=94.48  E-value=0.99  Score=42.30  Aligned_cols=102  Identities=13%  Similarity=0.098  Sum_probs=58.6

Q ss_pred             HHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceE
Q 015826          211 SHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHL  290 (399)
Q Consensus       211 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~v  290 (399)
                      +.+..+++.|+++|+++.+|+.....                             ...+...+...          |.. 
T Consensus       192 ~~f~~~f~~A~~~gl~~~~HagE~~~-----------------------------~~~i~~al~~l----------g~~-  231 (367)
T 3iar_A          192 PGHVQAYQEAVKSGIHRTVHAGEVGS-----------------------------AEVVKEAVDIL----------KTE-  231 (367)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEESSSSC-----------------------------HHHHHHHHHTS----------CCS-
T ss_pred             HHHHHHHHHHHHcCCeeEEecCCcCC-----------------------------hHHHHHHHHcc----------CCc-
Confidence            67899999999999999999943211                             01233333221          222 


Q ss_pred             EEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCC
Q 015826          291 HIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDH  369 (399)
Q Consensus       291 hi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh  369 (399)
                      .|.|.....+.-++++..+++|  |..++||..=..    +       +..+.++..    .+.+.++.|..-+|+||.
T Consensus       232 RIgHgv~l~~d~~l~~~l~~~~--i~le~cP~SN~~----l-------~~~~~~~~h----Pi~~ll~~Gv~v~l~TDd  293 (367)
T 3iar_A          232 RLGHGYHTLEDQALYNRLRQEN--MHFEICPWSSYL----T-------GAWKPDTEH----AVIRLKNDQANYSLNTDD  293 (367)
T ss_dssp             EEEECGGGGGCHHHHHHHHHTT--CEEEECHHHHHH----T-------SSSCTTSCC----HHHHHHHTTCCEEECCBS
T ss_pred             eeeeeeeecCCHHHHHHHHhCC--cEEEECHHHHHH----h-------CCCCCcccC----hHHHHHHCCCEEEECCCC
Confidence            3677654312234666666665  556778841100    0       011222111    356667889999999995

>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0

Probab=94.40  E-value=0.66  Score=43.12  Aligned_cols=40  Identities=15%  Similarity=-0.005  Sum_probs=29.7

Q ss_pred             cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .++.+|.+.-...      ..+.+.+.++++.|+++|+++++|+..
T Consensus       163 ~~vvG~dL~g~E~------~~~~~~~~~~~~~A~~~gl~~~~HagE  202 (343)
T 3rys_A          163 APIAGIGLDSAEV------GNPPSKFERLYQRAAEAGLRRIAHAGE  202 (343)
T ss_dssp             CCCCEEEEESCCT------TCCGGGGHHHHHHHHHTTCEEEEEESS
T ss_pred             CCEEEEecCCccc------CCCHHHHHHHHHHHHHCCCeEEEeeCC
Confidence            5677776642221      245678999999999999999999843

>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1

Probab=92.35  E-value=1.7  Score=38.96  Aligned_cols=124  Identities=10%  Similarity=0.019  Sum_probs=72.0

Q ss_pred             hhHHHHHHHHHcCCcEEEEeecCCCCCCC-CCCCHHHHHHHHHHHHhc---CCCEEEecCChhhchhHHhhccCcCCchh
Q 015826          177 YNASALEALLNAGVLGLKSFMCPSGINDF-PMTNASHIKEGLSVLARY---KRPLLVHAEMEKGSERHVKLEDDTLDTRS  252 (399)
Q Consensus       177 ~~~~~l~~l~~~G~~~ik~~~~~~~~~~~-~~~~~~~l~~~~~~a~~~---g~~v~~H~~~~~~~~~~~~~~~~~~~~~~  252 (399)
                      ..++..+++++.|++-|.+..... .++. +....+++++++...+..   ++++.++..+++.++..+..+-   +...
T Consensus        30 ~a~~~a~~~v~~GAdiIDIGgest-rpga~~v~~~eE~~Rv~pvi~~l~~~~~piSIDT~~~~va~aAl~aGa---~iIN  105 (280)
T 1eye_A           30 DAVKHGLAMAAAGAGIVDVGGESS-RPGATRVDPAVETSRVIPVVKELAAQGITVSIDTMRADVARAALQNGA---QMVN  105 (280)
T ss_dssp             HHHHHHHHHHHTTCSEEEEECC---------------HHHHHHHHHHHHHTTCCEEEECSCHHHHHHHHHTTC---CEEE
T ss_pred             HHHHHHHHHHHCCCCEEEECCccC-CCCCCCCCHHHHHHHHHHHHHHhhcCCCEEEEeCCCHHHHHHHHHcCC---CEEE
Confidence            345667888899999888753221 1111 234567777777666654   9999999999998887776531   2222


Q ss_pred             hhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCC----C---------------hhHHHHHHHHHHHCCC
Q 015826          253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS----D---------------ASSSLDLLMEAKTNGD  313 (399)
Q Consensus       253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s----~---------------~~~~l~~i~~ak~~G~  313 (399)
                      ...+....|         +++.+++++       |+++.+.|..    +               .....+.++.+.+.|+
T Consensus       106 dvsg~~~d~---------~m~~~~a~~-------~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi  169 (280)
T 1eye_A          106 DVSGGRADP---------AMGPLLAEA-------DVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGV  169 (280)
T ss_dssp             ETTTTSSCT---------THHHHHHHH-------TCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ECCCCCCCH---------HHHHHHHHh-------CCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCC
Confidence            222211122         345556655       8999999973    1               1122356777888898


Q ss_pred             C---EEEEcc
Q 015826          314 S---ITVETC  320 (399)
Q Consensus       314 ~---vt~e~~  320 (399)
                      +   |..|..
T Consensus       170 ~~~~IilDPg  179 (280)
T 1eye_A          170 DPARLVLDPG  179 (280)
T ss_dssp             CGGGEEEECC
T ss_pred             ChhhEEEECC
Confidence            6   777754

>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A

Probab=91.97  E-value=1.1  Score=39.41  Aligned_cols=39  Identities=23%  Similarity=0.348  Sum_probs=27.3

Q ss_pred             cceeecccccCCC---CCCCcCchHHHHHHHHcCCeeeeecC
Q 015826           98 PGLIDVHAHLDDP---GRTEWEGFPSGTKAAAAGGITTLIDM  136 (399)
Q Consensus        98 PGlID~H~H~~~~---~~~~~e~~~~~~~~al~~GvTtv~d~  136 (399)
                      .|++|.|+|.-..   |..+.++.....+.|.+.|++.+.--
T Consensus         3 ~~m~D~H~Ht~~~~ddg~~~~e~~~e~i~~A~~~Gi~~i~~T   44 (247)
T 2wje_A            3 MGMIDIHSHIVFDVDDGPKSREESKALLAESYRQGVRTIVST   44 (247)
T ss_dssp             -CEEECCBCCSTTSSSSCSSHHHHHHHHHHHHHTTEEEEECC
T ss_pred             CCCEEEecccCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Confidence            4689999998432   33333444567889999999998754

>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A

Probab=91.28  E-value=1.7  Score=38.97  Aligned_cols=121  Identities=11%  Similarity=0.123  Sum_probs=74.7

Q ss_pred             hHHHHHHHHHcCCcEEEEeecCCCCCCC-CCCCHHHHHHHHHHHHhc----CCCEEEecCChhhchhHHhhccCcCCchh
Q 015826          178 NASALEALLNAGVLGLKSFMCPSGINDF-PMTNASHIKEGLSVLARY----KRPLLVHAEMEKGSERHVKLEDDTLDTRS  252 (399)
Q Consensus       178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~-~~~~~~~l~~~~~~a~~~----g~~v~~H~~~~~~~~~~~~~~~~~~~~~~  252 (399)
                      .++..++++++|++-|.+..... .++. +....++++++....+..    ++++.+++.+++.++..+..+-   +...
T Consensus        40 a~~~a~~~v~~GAdiIDIGgest-rPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~~va~aAl~aGa---~iIN  115 (282)
T 1aj0_A           40 AVKHANLMINAGATIIDVGGEST-RPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKPEVIRESAKVGA---HIIN  115 (282)
T ss_dssp             HHHHHHHHHHHTCSEEEEESSCC-STTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHTTC---CEEE
T ss_pred             HHHHHHHHHHCCCCEEEECCCcC-CCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCHHHHHHHHHcCC---CEEE
Confidence            45667788889999888764221 1122 233467777666665543    9999999999998887776521   2222


Q ss_pred             hhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCC-C-----------------hhHHHHHHHHHHHCCCC
Q 015826          253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS-D-----------------ASSSLDLLMEAKTNGDS  314 (399)
Q Consensus       253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s-~-----------------~~~~l~~i~~ak~~G~~  314 (399)
                      ...+. ..         .+++.+++++       |+++.+.|.. .                 .....+.++.+++.|++
T Consensus       116 dvsg~-~d---------~~~~~~~a~~-------~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~  178 (282)
T 1aj0_A          116 DIRSL-SE---------PGALEAAAET-------GLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIA  178 (282)
T ss_dssp             ETTTT-CS---------TTHHHHHHHH-------TCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             ECCCC-CC---------HHHHHHHHHh-------CCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCC
Confidence            11111 11         2334555655       8899999973 1                 11344566778888986


Q ss_pred             ---EEEEc
Q 015826          315 ---ITVET  319 (399)
Q Consensus       315 ---vt~e~  319 (399)
                         |..|.
T Consensus       179 ~~~IilDP  186 (282)
T 1aj0_A          179 KEKLLLDP  186 (282)
T ss_dssp             GGGEEEEC
T ss_pred             hhhEEEeC
Confidence               77773

>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...

Probab=89.56  E-value=8.9  Score=34.57  Aligned_cols=122  Identities=13%  Similarity=0.128  Sum_probs=73.6

Q ss_pred             hHHHHHHHHHcCCcEEEEeecCCCCCCC-CCCCHHHHHHHH---HHHHh-cCCCEEEecCChhhchhHHhhccCcCCchh
Q 015826          178 NASALEALLNAGVLGLKSFMCPSGINDF-PMTNASHIKEGL---SVLAR-YKRPLLVHAEMEKGSERHVKLEDDTLDTRS  252 (399)
Q Consensus       178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~-~~~~~~~l~~~~---~~a~~-~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~  252 (399)
                      ..+..+++++.|++-|.+...... ++. +....+++++++   +..++ .++++.+...+++.++..++.+-   +...
T Consensus        65 a~~~a~~~v~~GAdiIDIGgeStr-Pga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~~V~~aAl~aGa---~iIN  140 (297)
T 1tx2_A           65 AVRHAKEMRDEGAHIIDIGGESTR-PGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKAEVAKQAIEAGA---HIIN  140 (297)
T ss_dssp             HHHHHHHHHHTTCSEEEEESCC-----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCHHHHHHHHHHTC---CEEE
T ss_pred             HHHHHHHHHHcCCCEEEECCCcCC-CCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCHHHHHHHHHcCC---CEEE
Confidence            355667788899998887642211 122 233467787776   54444 49999999999988877776521   2222


Q ss_pred             hhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCC-h----------hHHHHHHHHHHHCCCC---EEEE
Q 015826          253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSD-A----------SSSLDLLMEAKTNGDS---ITVE  318 (399)
Q Consensus       253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~-~----------~~~l~~i~~ak~~G~~---vt~e  318 (399)
                      ...+....         .+++.+++++       |+++.+.|... +          ....+.++.+.+.|++   |..|
T Consensus       141 dvsg~~~d---------~~m~~~aa~~-------g~~vVlmh~~G~p~y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilD  204 (297)
T 1tx2_A          141 DIWGAKAE---------PKIAEVAAHY-------DVPIILMHNRDNMNYRNLMADMIADLYDSIKIAKDAGVRDENIILD  204 (297)
T ss_dssp             ETTTTSSC---------THHHHHHHHH-------TCCEEEECCCSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             ECCCCCCC---------HHHHHHHHHh-------CCcEEEEeCCCCCCcchHHHHHHHHHHHHHHHHHHcCCChhcEEEe
Confidence            11121111         2334555655       88999999731 0          1345567778888986   7777


Q ss_pred             c
Q 015826          319 T  319 (399)
Q Consensus       319 ~  319 (399)
                      .
T Consensus       205 P  205 (297)
T 1tx2_A          205 P  205 (297)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3aam_A Endonuclease IV, endoiv; DNA repair, base excision repair, BER, TIM barrel, endonucle hydrolase, structural genomics, NPPSFA; 1.58A {Thermus thermophilus}

Probab=88.93  E-value=8.5  Score=33.67  Aligned_cols=53  Identities=15%  Similarity=0.142  Sum_probs=31.6

Q ss_pred             HHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCC-CEEEec
Q 015826          179 ASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR-PLLVHA  231 (399)
Q Consensus       179 ~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~-~v~~H~  231 (399)
                      .+.++.+.+.|..++.++...+..-.....+++.++++.+.++++|+ .+.+|.
T Consensus        17 ~~~~~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~h~   70 (270)
T 3aam_A           17 AGAVEEATALGLTAFQIFAKSPRSWRPRALSPAEVEAFRALREASGGLPAVIHA   70 (270)
T ss_dssp             HHHHHHHHHHTCSCEEEESSCTTCCSCCCCCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred             HHHHHHHHHcCCCEEEEeCCCCCcCcCCCCCHHHHHHHHHHHHHcCCceEEEec
Confidence            34455566677777776442211001123456777777777888887 777776

>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*

Probab=86.65  E-value=1.3  Score=41.66  Aligned_cols=54  Identities=15%  Similarity=0.242  Sum_probs=42.6

Q ss_pred             hHHHHHHHHHc-CCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          178 NASALEALLNA-GVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       178 ~~~~l~~l~~~-G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      ..++++++++. |+.++++.....+    ...+++.+..+++.+.++|++|.+|+....
T Consensus       161 a~~EL~r~~~~~G~~Gv~l~~~~~g----~~l~d~~~~pi~~~~~e~g~pV~iH~g~~~  215 (373)
T 4inf_A          161 SAREIHRGARELGFKGIQINSHTQG----RYLDEEFFDPIFRALVEVDQPLYIHPATSP  215 (373)
T ss_dssp             HHHHHHHHHHTSCCCCEEECSCBTT----BCTTSGGGHHHHHHHHHHTCCEEECCCCCC
T ss_pred             HHHHHHHHHhhcCceEEEECCCCCC----CCCCCcchHHHHHHHHHcCCeEEECCCCCC
Confidence            56889998876 9999997643322    245677899999999999999999987543

>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}

Probab=85.62  E-value=6.5  Score=36.90  Aligned_cols=40  Identities=13%  Similarity=-0.058  Sum_probs=28.5

Q ss_pred             cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .|+.||.+.-...   +   ...+.+..+++.|++.|+++.+|+..
T Consensus       180 ~~VvG~dL~g~E~---~---~p~~~f~~~f~~ar~~Gl~~t~HAGE  219 (380)
T 4gxw_A          180 DEVAGIGIDYREN---D---RPPELFWKAYRDARAAGFRTTAHAGE  219 (380)
T ss_dssp             TTBCEEEEESCCT---T---CCGGGGHHHHHHHHHTTCEEEEEESC
T ss_pred             CCEEEEeecCCCC---C---CCHHHHHHHHHHHHHcCCCeeeeccc
Confidence            4677776642221   1   23456888999999999999999953

>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A

Probab=85.36  E-value=3.1  Score=36.93  Aligned_cols=38  Identities=32%  Similarity=0.476  Sum_probs=26.2

Q ss_pred             eeecccccCCC---CCCCcCchHHHHHHHHcCCeeeeecCc
Q 015826          100 LIDVHAHLDDP---GRTEWEGFPSGTKAAAAGGITTLIDMP  137 (399)
Q Consensus       100 lID~H~H~~~~---~~~~~e~~~~~~~~al~~GvTtv~d~~  137 (399)
                      +||.|+|....   |..+.+......+.|.+.|++.+.--+
T Consensus         1 m~D~H~H~~~~~ddG~~~~~~sl~~~~~a~~~G~~~i~~T~   41 (262)
T 3qy7_A            1 MIDIHCHILPAMDDGAGDSADSIEMARAAVRQGIRTIIATP   41 (262)
T ss_dssp             CEESSBCCSTTSSSSCSSHHHHHHHHHHHHHTTCCEEECCC
T ss_pred             CEEEeecCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence            58999999642   333333333468889999999987544

>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*

Probab=84.23  E-value=21  Score=32.03  Aligned_cols=122  Identities=11%  Similarity=0.052  Sum_probs=74.7

Q ss_pred             hhHHHHHHHHHcCCcEEEEeecCCCCCCCC-CCCHHHHHHHHHHHHhc---CCCEEEecCChhhchhHHhhccCcCCchh
Q 015826          177 YNASALEALLNAGVLGLKSFMCPSGINDFP-MTNASHIKEGLSVLARY---KRPLLVHAEMEKGSERHVKLEDDTLDTRS  252 (399)
Q Consensus       177 ~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~-~~~~~~l~~~~~~a~~~---g~~v~~H~~~~~~~~~~~~~~~~~~~~~~  252 (399)
                      ..++..++++++|++-|-+..... .++.. ....+++++++...+..   ++++.+-..+++.++..+..+-   +...
T Consensus        47 ~a~~~a~~~v~~GAdiIDIGgeST-rPga~~v~~~eE~~Rv~pvi~~l~~~~vpiSIDT~~~~Va~aAl~aGa---~iIN  122 (294)
T 2y5s_A           47 DALRRAERMIAEGADLLDIGGEST-RPGAPPVPLDEELARVIPLVEALRPLNVPLSIDTYKPAVMRAALAAGA---DLIN  122 (294)
T ss_dssp             HHHHHHHHHHHTTCSEEEEESSCC-STTCCCCCHHHHHHHHHHHHHHHGGGCSCEEEECCCHHHHHHHHHHTC---SEEE
T ss_pred             HHHHHHHHHHHCCCCEEEECCCcC-CCCCCCCCHHHHHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHcCC---CEEE
Confidence            356677888899999887653221 12222 33466777776665543   8999999999988877776531   2221


Q ss_pred             hhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCC----C---------------hhHHHHHHHHHHHCCC
Q 015826          253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLS----D---------------ASSSLDLLMEAKTNGD  313 (399)
Q Consensus       253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s----~---------------~~~~l~~i~~ak~~G~  313 (399)
                      -..+.. .         .+++.+++++       |+++.+.|..    +               .....+.++.+.+.|+
T Consensus       123 dVsg~~-d---------~~m~~~~a~~-------~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi  185 (294)
T 2y5s_A          123 DIWGFR-Q---------PGAIDAVRDG-------NSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGV  185 (294)
T ss_dssp             ETTTTC-S---------TTHHHHHSSS-------SCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTC
T ss_pred             ECCCCC-c---------hHHHHHHHHh-------CCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCC
Confidence            111111 1         2345566654       9999999973    1               1123456667788898


Q ss_pred             C---EEEEc
Q 015826          314 S---ITVET  319 (399)
Q Consensus       314 ~---vt~e~  319 (399)
                      +   |..|.
T Consensus       186 ~~~~IilDP  194 (294)
T 2y5s_A          186 AAERICVDP  194 (294)
T ss_dssp             CGGGEEEEC
T ss_pred             ChhhEEEeC
Confidence            6   77773

>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}

Probab=83.79  E-value=9.2  Score=33.26  Aligned_cols=22  Identities=18%  Similarity=0.012  Sum_probs=10.6

Q ss_pred             CHHHHHHHHHHHHhcCCCEEEe
Q 015826          209 NASHIKEGLSVLARYKRPLLVH  230 (399)
Q Consensus       209 ~~~~l~~~~~~a~~~g~~v~~H  230 (399)
                      +++.++++.+.++++|+.+..|
T Consensus        61 ~~~~~~~~~~~l~~~gl~i~~~   82 (262)
T 3p6l_A           61 DAQTQKEIKELAASKGIKIVGT   82 (262)
T ss_dssp             CHHHHHHHHHHHHHTTCEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCeEEEE
Confidence            3444445555555555544443

>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}

Probab=82.05  E-value=1.3  Score=42.49  Aligned_cols=58  Identities=14%  Similarity=0.045  Sum_probs=43.7

Q ss_pred             hhHHHHHHHHHcCCcEEEEeecCC-CCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          177 YNASALEALLNAGVLGLKSFMCPS-GINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       177 ~~~~~l~~l~~~G~~~ik~~~~~~-~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      ...++++++++.|+.++++...+. +..+....+++.+..+++.+.++|++|.+|+.+.
T Consensus       176 ~a~~EL~r~~~~G~~Gv~l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~  234 (423)
T 4dzi_A          176 RAVEEVDFVLARGAKLVLVRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDS  234 (423)
T ss_dssp             HHHHHHHHHHHTTCSCEECCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred             HHHHHHHHHHHcCCeEEEEecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCC
Confidence            467889999999999999753321 1111234567889999999999999999998754

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	399
d1nfga2	330	c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pi	2e-50
d2ftwa2	334	c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolas	2e-49
d1kcxa2	334	c.1.9.6 (A:67-400) Dihydropyrimidinase related pro	1e-47
d2fvka2	384	c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolas	2e-47
d1gkpa2	335	c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [Ta	4e-45
d1ynya2	332	c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR	6e-44
d1xrta2	310	c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aqui	2e-41
d1gkra2	325	c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter au	4e-37
d2eg6a1	343	c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli	1e-20
d2vhla2	301	c.1.9.10 (A:58-358) N-acetylglucosamine-6-phosphat	3e-16
d1onwa2	284	c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catal	2e-14
d1i0da_	331	c.1.9.3 (A:) Phosphotriesterase (parathion hydrola	2e-13
d1onwa1	105	b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidas	1e-08
d1ejxc1	181	b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit o	2e-08
d1yrra1	85	b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-	9e-07
d1o12a2	288	c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphat	6e-06
d2icsa2	267	c.1.9.14 (A:55-321) Putative adenine deaminase EF0	6e-06
d2p9ba1	118	b.92.1.10 (A:9-70,A:395-450) Uncharacterized prote	5e-05
d2vhla1	91	b.92.1.5 (A:3-57,A:359-394) N-acetylglucosamine-6-	4e-04
d4ubpc2	390	c.1.9.2 (C:132-434,C:484-570) alpha-subunit of ure	6e-04
d1yrra2	297	c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphat	0.002
d2fvka1	156	b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine amid	0.003

>d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii [TaxId: 329]} Length = 330

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Burkholderia pickettii [TaxId: 329]

 Score =  170 bits (432), Expect = 2e-50
 Identities = 72/303 (23%), Positives = 119/303 (39%), Gaps = 19/303 (6%)

Query: 99  GLIDVHAHLDDP--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDA 156
           G IDVH H++         + F + T AAA GG TT++D     D      E +      
Sbjct: 1   GGIDVHTHVETVSFNTQSADTFATATVAAACGGTTTIVDFC-QQDRGHSLAEAVAKWDGM 59

Query: 157 AEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEG 216
           A  +  +D G+   ++         LE L + G+   K FM         M +   + + 
Sbjct: 60  AGGKSAIDYGYHIIVLDPTDSVIEELEVLPDLGITSFKVFM---AYRGMNMIDDVTLLKT 116

Query: 217 LSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVA 276
           L    +    ++VHAE    +  +++ +       +   +  +RPP  E  A    L +A
Sbjct: 117 LDKAVKTGSLVMVHAENGDAA-DYLRDKFVAEGKTAPIYHALSRPPRVEAEATARALALA 175

Query: 277 KDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAF---SAEEIPD 333
           +          A ++IVH++   S  + +M AK+ G     ETC HYL       E    
Sbjct: 176 EIV-------NAPIYIVHVTCEESL-EEVMRAKSRGVRALAETCTHYLYLTKEDLERPDF 227

Query: 334 GDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGIS 392
              ++   PP R   + + LW AL +G  + +SSDH        K     +F     G  
Sbjct: 228 EGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAP 287

Query: 393 SLQ 395
            ++
Sbjct: 288 GVE 290

>d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]} Length = 334

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Dictyostelium discoideum [TaxId: 44689]

 Score =  168 bits (425), Expect = 2e-49
 Identities = 56/305 (18%), Positives = 102/305 (33%), Gaps = 19/305 (6%)

Query: 98  PGLIDVHAHLDDP--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVD 155
           PG ID H H   P  G    + F  GT+AA AGG T +ID            E       
Sbjct: 1   PGGIDTHTHFQLPFMGTVSVDDFDIGTQAAVAGGTTFIIDFV-IPTRGQSLLEAYDQWKK 59

Query: 156 AAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKE 215
            A++++  D      +   +   +  +E L+     G+ SF C     +  M     +  
Sbjct: 60  WADEKVNCDYSLHVAITWWSEQVSREMEILVKER--GVNSFKCFMAYKNSFMVTDQEMYH 117

Query: 216 GLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTV 275
                        VHAE         + +   +       +  +RP + E  A    + +
Sbjct: 118 IFKRCKELGAIAQVHAENGDMV-FEGQKKMLEMGITGPEGHELSRPEALEAEATNRAIVI 176

Query: 276 AKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD 335
           A                +    +  + D++ + +  G  +  E     L      + + D
Sbjct: 177 ADSVC--------TPVYIVHVQSIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHD 228

Query: 336 TRF-----KCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGG 390
            R         P   D   K  L + L  G +D + +D+     + K + + +F K   G
Sbjct: 229 WRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNG 288

Query: 391 ISSLQ 395
           ++ ++
Sbjct: 289 VNGVE 293

>d1kcxa2 c.1.9.6 (A:67-400) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 334

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Dihydropyrimidinase related protein-1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  163 bits (412), Expect = 1e-47
 Identities = 63/305 (20%), Positives = 106/305 (34%), Gaps = 19/305 (6%)

Query: 98  PGLIDVHAHLDDP--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVD 155
           PG IDV+ +L  P  G T  + F  GTKAA AGG T +ID     +P +    + +   +
Sbjct: 1   PGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHV-VPEPGSSLLTSFEKWHE 59

Query: 156 AAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKE 215
           AA+ +   D      +          LE L+     G+ SF       D    + S + E
Sbjct: 60  AADTKSCCDYSLHVDITSWYDGVREELEVLVQDK--GVNSFQVYMAYKDLYQMSDSQLYE 117

Query: 216 GLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTV 275
             + L      +LVHA          +     +       +  +RP   E  A+   + +
Sbjct: 118 AFTFLKGLGAVILVHA-ENGDLIAQEQKRILEMGITGPEGHALSRPEELEAEAVFRAIAI 176

Query: 276 AKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEE----- 330
           A             ++I  +   S++ D++  A+  G  +  E     L           
Sbjct: 177 AGRI-------NCPVYITKVMSKSAA-DIIALARKKGPLVFGEPIAASLGTDGTHYWSKN 228

Query: 331 IPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGG 390
                      P   D    + L   L  G + +  S H P     K + + NF     G
Sbjct: 229 WAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEG 288

Query: 391 ISSLQ 395
           ++ ++
Sbjct: 289 VNGIE 293

>d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 384

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

 Score =  164 bits (415), Expect = 2e-47
 Identities = 69/355 (19%), Positives = 124/355 (34%), Gaps = 71/355 (20%)

Query: 99  GLIDVHAHLDDPGR---TEWEGFPSGTKAAAAGGITTLIDMPLNS---DPSTISTETLKL 152
           G ID H H+D+P +      +     T++A AGG TT++            +   E++KL
Sbjct: 1   GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKL 60

Query: 153 KVD-AAEKRIYVDVGFWGGLVPENAYNASALE--------ALLNAGVLGLKSFMCPSGIN 203
            VD  +E+ +Y D G    L      +  A E        A  + GV  +K FM      
Sbjct: 61  DVDEYSEQTLYCDYGLHLILFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMT----Y 116

Query: 204 DFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPS 263
                +   I   +    +     ++HAE     +  ++  ++   T     +  +RP  
Sbjct: 117 PGLQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIEALEEQGLT-DAYYHGVSRPSI 175

Query: 264 WEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHY 323
            E  A    +T+A             +  VH+S   ++ +++ +A+T G  +  ETCP Y
Sbjct: 176 VEGEATNRAITLATTM-------DTPILFVHVSSPQAA-EVIKQAQTKGLKVYAETCPQY 227

Query: 324 LAFSAEEIPDGD------------------------------TRFKCAPPIRDAANKEKL 353
              S                                      +++ C+PPIR    ++ +
Sbjct: 228 ALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSI 287

Query: 354 WEALMDGHIDMLSSDHSPTVPELKLL-------------DEGNFLKAWGGISSLQ 395
           W+ + +G   ++ SDH       K                 G F     G+  + 
Sbjct: 288 WKGMNNGTFTIVGSDHCSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVC 342

>d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId: 275]} Length = 335

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Thermus sp. [TaxId: 275]

 Score =  157 bits (396), Expect = 4e-45
 Identities = 73/301 (24%), Positives = 118/301 (39%), Gaps = 18/301 (5%)

Query: 100 LIDVHAHLDDPGRTEW--EGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA 157
            ID H H+  P    +  +   +G+KAA  GG TT I+M      +  + E  +L    A
Sbjct: 1   FIDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMC-CPSRNDDALEGYQLWKSKA 59

Query: 158 EKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 217
           E   Y D  F   +   +      L  ++  G+   K F+       F   +   + + L
Sbjct: 60  EGNSYCDYTFHMAVSKFDEKTEGQLREIVADGISSFKIFLSYKN---FFGVDDGEMYQTL 116

Query: 218 SVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAK 277
            +       +  H E  +   R  +       T     +  +RP + E        T  +
Sbjct: 117 RLAKELGVIVTAHCENAELVGRLQQKLLSEGKT-GPEWHEPSRPEAVEAEGTARFATFLE 175

Query: 278 DTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD-- 335
            T       GA  ++VHLS   +  D  M AK  G  I +E+   +          G   
Sbjct: 176 TT-------GATGYVVHLSCKPAL-DAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVE 227

Query: 336 -TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSL 394
             ++  +PP+RD  N++ LW+AL  G ID + +DH P   E KLL +  F     GI ++
Sbjct: 228 AMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAI 287

Query: 395 Q 395
           +
Sbjct: 288 E 288

>d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]} Length = 332

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Bacillus sp. AR9 [TaxId: 301298]

 Score =  153 bits (387), Expect = 6e-44
 Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 20/304 (6%)

Query: 99  GLIDVHAHLDDP--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDA 156
           G ID H HLD P  G    + F +GT+AAA GG T+++D    +         +    + 
Sbjct: 1   GGIDPHTHLDMPFGGTVTADDFFTGTRAAAFGGTTSIVDFC-LTKKGESLKSAIATWHEK 59

Query: 157 AEKRIYVDVGFWGGLVPENAYNASALEALLNA-GVLGLKSFMCPSGINDFPMTNASHIKE 215
           A  +  +D GF   +   N      LE+++++ G+  LK FM    +      +   + +
Sbjct: 60  ARGKAVIDYGFHLMIAEANDQVLEELESVISSEGITSLKVFMAYKNV---FQADDETLFK 116

Query: 216 GLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTV 275
            L         + VHAE       ++  +           +  TRPP  E  A    + +
Sbjct: 117 TLVKAKELGALVQVHAENGDVL-DYLTKKALAEGNTDPIYHAYTRPPEAEGEATGRAIAL 175

Query: 276 AKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD 335
                       + L++VH+S AS+    + EA+  G ++  ETCP YLA     +   D
Sbjct: 176 TALAG-------SQLYVVHVSCASAV-QRIAEAREKGWNVYGETCPQYLALDVSIMDQPD 227

Query: 336 ---TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSP-TVPELKLLDEGNFLKAWGGI 391
               ++  +PP+R+  N+E LW AL +G +  + SDH P      K L  G+F K   G 
Sbjct: 228 FEGAKYVWSPPLREKWNQEVLWSALKNGILQTVGSDHCPFNFRGQKELGRGDFTKIPNGG 287

Query: 392 SSLQ 395
             ++
Sbjct: 288 PLIE 291

>d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]} Length = 310

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Two-domain dihydroorotase
species: Aquifex aeolicus [TaxId: 63363]

 Score =  146 bits (369), Expect = 2e-41
 Identities = 72/297 (24%), Positives = 126/297 (42%), Gaps = 24/297 (8%)

Query: 99  GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE 158
           G ID+H HL DPG+T  E   SG++ A AGG TT++ MP N++P   +T  +   +  ++
Sbjct: 1   GFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMP-NTNPPIDNTTVVNYILQKSK 59

Query: 159 KRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLS 218
                 V   G +          +    +    G  +F      +  P+ ++S +++ L 
Sbjct: 60  SVGLCRVLPTGTITKGR--KGKEIADFYSLKEAGCVAFTD----DGSPVMDSSVMRKALE 113

Query: 219 VLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKD 278
           + ++   P++ H E +K +   +   + +         L +R P  EE  I     +A+ 
Sbjct: 114 LASQLGVPIMDHCEDDKLAYGVINEGEVS-----ALLGLSSRAPEAEEIQIARDGILAQR 168

Query: 279 TRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRF 338
           T             +       SL+++   K  G  IT E  P++L F+  E+ +     
Sbjct: 169 TG--------GHVHIQHVSTKLSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGANA 220

Query: 339 KCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
           +  PP+R   ++  L E +  G ID  ++DH+P     K L       A  GI  LQ
Sbjct: 221 RVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEKEL----VEFAMPGIIGLQ 273

>d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]} Length = 325

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: L-hydantoinase
species: Arthrobacter aurescens [TaxId: 43663]

 Score =  135 bits (339), Expect = 4e-37
 Identities = 80/301 (26%), Positives = 127/301 (42%), Gaps = 20/301 (6%)

Query: 99  GLIDVHAHLDDPGRTEWEG-FPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAA 157
           G++D H H+ D       G F   +++AA GGITT+I+MP  + P T + +    K   A
Sbjct: 1   GVVDEHVHIIDMDLKNRYGRFELDSESAAVGGITTIIEMP-ITFPPTTTLDAFLEKKKQA 59

Query: 158 EKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGL 217
            +R+ VD   +GG VP    N   +  + +AG +G KS M  S    F   +   + E  
Sbjct: 60  GQRLKVDFALYGGGVP---GNLPEIRKMHDAGAVGFKSMMAASVPGMFDAVSDGELFEIF 116

Query: 218 SVLARYKRPLLVHA---EMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLT 274
             +A     ++VHA    + +  ++ +K           + Y  ++P   E         
Sbjct: 117 QEIAACGSVIVVHAENETIIQALQKQIKAAGGK----DMAAYEASQPVFQE--------N 164

Query: 275 VAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG 334
            A         E     IV        ++L+ +A++ G  +  E+ P YL  + ++    
Sbjct: 165 EAIQRALLLQKEAGCRLIVLHVSNPDGVELIHQAQSEGQDVHCESGPQYLNITTDDAERI 224

Query: 335 DTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSL 394
               K APP+R A    +LWE L +G ID L SDH     E K     +  KA  G   L
Sbjct: 225 GPYMKVAPPVRSAEMNIRLWEQLENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGL 284

Query: 395 Q 395
           +
Sbjct: 285 E 285

>d2eg6a1 c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli [TaxId: 562]} Length = 343

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Dihydroorotase
domain: Dihydroorotase
species: Escherichia coli [TaxId: 562]

 Score = 89.7 bits (221), Expect = 1e-20
 Identities = 29/299 (9%), Positives = 66/299 (22%), Gaps = 35/299 (11%)

Query: 102 DVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI 161
           D H HL D G               +      I MP N  P   + E            +
Sbjct: 11  DWHLHLRD-GDML-----KTVVPYTSEIYGRAIVMP-NLAPPVTTVEAAVAYRQRILDAV 63

Query: 162 YVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLA 221
                F   +      ++     L      G+ +       N    ++            
Sbjct: 64  PAGHDFTPLMTCYL-TDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVT-------- 114

Query: 222 RYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRT 281
                  +   +E             +        +                   + T  
Sbjct: 115 ---SVDAIMPVLE---RMEKIGMPLLVHGEVTHADIDIFDREARFIESVMEPLRQRLT-- 166

Query: 282 DGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAE--EIPDGDTRFK 339
                   +   H++   ++       +   + +     P +L F+     +        
Sbjct: 167 -----ALKVVFEHITTKDAA----DYVRDGNERLAATITPQHLMFNRNHMLVGGVRPHLY 217

Query: 340 CAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY 398
           C P ++   +++ L E +  G   +     S      +          +   ++L    
Sbjct: 218 CLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKESSCGCAGCFNAPTALGSYA 276

>d1onwa2 c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catalytic domain {Escherichia coli [TaxId: 562]} Length = 284

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Isoaspartyl dipeptidase, catalytic domain
domain: Isoaspartyl dipeptidase, catalytic domain
species: Escherichia coli [TaxId: 562]

 Score = 70.6 bits (171), Expect = 2e-14
 Identities = 32/300 (10%), Positives = 68/300 (22%), Gaps = 57/300 (19%)

Query: 99  GLIDVHAHLDDPGRTE---WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVD 155
           G ID H HL   G                    G+T+++ +   +D  +   E+L  K  
Sbjct: 1   GFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLL-GTDSISRHPESLLAKTR 59

Query: 156 AAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKE 215
           A  +         G     +                          +             
Sbjct: 60  ALNEEGISAWMLTGAYHVPSRTITG----------------SVEKDVAIIDRVIGVKCAI 103

Query: 216 GLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTV 275
                A      L +   E      +  +          +            A++ +  +
Sbjct: 104 SDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVFHMGDSK----------KALQPIYDL 153

Query: 276 AKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD 335
            ++           +  +  +                 +  V      L F+ +     D
Sbjct: 154 LENC-------DVPISKLLPT---------------HVNRNVPLFEQALEFARKGGTI-D 190

Query: 336 TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQ 395
                  P+  A    +  +A +      LSSD + + P               G++  +
Sbjct: 191 ITSSIDEPVAPAEGIARAVQAGIPLARVTLSSDGNGSQPFFD----DEGNLTHIGVAGFE 246

>d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE) {Pseudomonas diminuta [TaxId: 293]} Length = 331

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Phosphotriesterase-like
domain: Phosphotriesterase (parathion hydrolase, PTE)
species: Pseudomonas diminuta [TaxId: 293]

 Score = 68.6 bits (166), Expect = 2e-13
 Identities = 42/307 (13%), Positives = 82/307 (26%), Gaps = 47/307 (15%)

Query: 99  GLIDVHAHLDDPGRTEWEGFP--------------SGTKAAAAGGITTLIDMPLNSDPST 144
           G    H H+          +P               G + A A G+ T++D+  ++    
Sbjct: 16  GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDV--STFDIG 73

Query: 145 ISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGIND 204
                L     AA+  I    G W            ++E L    +  ++  +  +GI  
Sbjct: 74  RDVSLLAEVSRAADVHIVAATGLWFDPPLS--MRLRSVEELTQFFLREIQYGIEDTGIRA 131

Query: 205 FPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSW 264
             +  A+  K         +  L   A     +   V                       
Sbjct: 132 GIIKVATTGKA----TPFQELVLKAAARASLATGVPVTT--------------------H 167

Query: 265 EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYL 324
             A+ R+    A    ++G         +  SD +  L  L      G  I ++  PH  
Sbjct: 168 TAASQRDGEQQAAIFESEGL--SPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPHSA 225

Query: 325 AFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNF 384
               +           +   R    K  + +  M     ++S+D         + +  + 
Sbjct: 226 IGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQ--ILVSNDWLFGFSS-YVTNIMDV 282

Query: 385 LKAWGGI 391
           +      
Sbjct: 283 MDRVNPD 289

>d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase {Escherichia coli [TaxId: 562]} Length = 105

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Isoaspartyl dipeptidase
domain: Isoaspartyl dipeptidase
species: Escherichia coli [TaxId: 562]

 Score = 50.4 bits (120), Expect = 1e-08
 Identities = 16/91 (17%), Positives = 28/91 (30%), Gaps = 10/91 (10%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD-- 108
            +  P+      V +  G II++ S            VVD    ++ P ++  +      
Sbjct: 16  HLYAPEDRGICDVLVANGKIIAVASNIPSDIVPNC-TVVDLSGQILCPEILPGNDADLLV 74

Query: 109 -DPGRTEWEGFPSGT------KAAAAGGITT 132
             P     + +  G       KA   G   T
Sbjct: 75  MTPELRIEQVYARGKLMVKDGKACVKGTFET 105

>d1ejxc1 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit of urease {Klebsiella aerogenes [TaxId: 28451]} Length = 181

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: alpha-Subunit of urease
domain: alpha-Subunit of urease
species: Klebsiella aerogenes [TaxId: 28451]

 Score = 51.4 bits (123), Expect = 2e-08
 Identities = 17/104 (16%), Positives = 35/104 (33%), Gaps = 9/104 (8%)

Query: 52  IVTPKGVISGAVEIKEGNIISIVSEEDWPRN-------SKTGQVVDYGEAVIMPGLIDVH 104
           IV   G++   + +K+G I +I    +               +V+     ++  G I+V 
Sbjct: 74  IVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGSIEVG 133

Query: 105 AHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTE 148
              D         F         GG+  +  M  + + S  + +
Sbjct: 134 KLADLV-VWSPAFFGVKPATVIKGGMIAIAPMG-DINASIPTPQ 175

>d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate deacetylase, NagA {Escherichia coli [TaxId: 562]} Length = 85

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: N-acetylglucosamine-6-phosphate deacetylase, NagA
domain: N-acetylglucosamine-6-phosphate deacetylase, NagA
species: Escherichia coli [TaxId: 562]

 Score = 44.3 bits (104), Expect = 9e-07
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 4/73 (5%)

Query: 45  YWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDV 103
           Y LT  RI T    +   AV I +G I S+    + P      +      A++ P L   
Sbjct: 2   YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELPPEI---EQRSLNGAILSPTLAAG 58

Query: 104 HAHLDDPGRTEWE 116
                     +++
Sbjct: 59  KVANLTAFTPDFK 71

>d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Thermotoga maritima [TaxId: 2336]} Length = 288

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
species: Thermotoga maritima [TaxId: 2336]

 Score = 45.2 bits (105), Expect = 6e-06
 Identities = 13/61 (21%), Positives = 20/61 (32%), Gaps = 1/61 (1%)

Query: 99  GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE 158
           G +D H H      T    F    +   + G+TT +     S       E L+   D   
Sbjct: 1   GFVDPHIHGVVGADTMNCDFSEMEEFLYSQGVTTFLAT-TVSTSLEKMKEILRKARDYIL 59

Query: 159 K 159
           +
Sbjct: 60  E 60

>d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]} Length = 267

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenine deaminase-like
domain: Putative adenine deaminase EF0837
species: Enterococcus faecalis [TaxId: 1351]

 Score = 44.9 bits (104), Expect = 6e-06
 Identities = 15/75 (20%), Positives = 24/75 (32%), Gaps = 9/75 (12%)

Query: 99  GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE 158
           G ID H H  +     ++      +     G+TT+ID        T   E +    D A+
Sbjct: 1   GWIDDHVHCFEKMALYYDYPD---EIGVKKGVTTVIDAG------TTGAENIHEFYDLAQ 51

Query: 159 KRIYVDVGFWGGLVP 173
           +      G       
Sbjct: 52  QAKTNVFGLVNISKW 66

>d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]} Length = 118

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Uncharacterized protein BL1453
species: Bifidobacterium longum [TaxId: 216816]

 Score = 40.2 bits (93), Expect = 5e-05
 Identities = 12/90 (13%), Positives = 22/90 (24%), Gaps = 6/90 (6%)

Query: 47  LTSKRIVTPKG----VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLID 102
           L    IVT       + +  + +     I  V+             +D    ++M  +  
Sbjct: 8   LAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSIPAEYHYLDGTGKIVMLEVGK 67

Query: 103 VHAHLDDPGR--TEWEGFPSGTKAAAAGGI 130
               L        +           AAG  
Sbjct: 68  SADLLVLNANPLDDLRALEHPALVIAAGHP 97

>d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]} Length = 390

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: alpha-subunit of urease, catalytic domain
domain: alpha-subunit of urease, catalytic domain
species: Bacillus pasteurii [TaxId: 1474]

 Score = 39.3 bits (92), Expect = 6e-04
 Identities = 31/143 (21%), Positives = 56/143 (39%), Gaps = 32/143 (22%)

Query: 99  GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTET--------L 150
           G ID H H  +P + +          A A GITTL        P+  S  T        +
Sbjct: 1   GGIDTHVHFINPDQVD---------VALANGITTLFGGGTG--PAEGSKATTVTPGPWNI 49

Query: 151 KLKVDAAEKRIYVDVGFWG-GLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTN 209
           +  + + E  + ++VG  G G    +  + + +   ++AG  GLK       I++     
Sbjct: 50  EKMLKSTE-GLPINVGILGKG----HGSSIAPIMEQIDAGAAGLK-------IHEDWGAT 97

Query: 210 ASHIKEGLSVLARYKRPLLVHAE 232
            + I   L+V       + +H++
Sbjct: 98  PASIDRSLTVADEADVQVAIHSD 120

>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]} Length = 297

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
species: Escherichia coli [TaxId: 562]

 Score = 37.5 bits (85), Expect = 0.002
 Identities = 30/215 (13%), Positives = 52/215 (24%), Gaps = 12/215 (5%)

Query: 99  GLIDVHAHL-------DDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLK 151
           G IDV  +        D       E      KA    G T  +   +     T S E +K
Sbjct: 1   GFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTLI-----TTSDELMK 55

Query: 152 LKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNAS 211
             V    + +        GL  E  +     +   N   +          + +       
Sbjct: 56  QGVRVMREYLAKHPNQALGLHLEGPWLNLVKKGTHNPNFVRKPDAALVDFLCENADVITK 115

Query: 212 HIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRE 271
                  V A     L     +      +  L++     R+  T+      +      RE
Sbjct: 116 VTLAPEMVPAEVISKLANAGIVVSAGHSNATLKEAKAGFRAGITFATHLYNAMPYITGRE 175

Query: 272 LLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLM 306
                          G     +H+  A+      +
Sbjct: 176 PGLAGAILDEADIYCGIIADGLHVDYANIRNAKRL 210

>d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]} Length = 156

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

 Score = 35.8 bits (82), Expect = 0.003
 Identities = 13/71 (18%), Positives = 26/71 (36%), Gaps = 8/71 (11%)

Query: 51  RIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSK----TGQVVDYGEAVIMPGLIDVHAH 106
            I T   + +  + +  G +  I +  D    S+     G  +      I+PG+ D    
Sbjct: 11  IICTASDIYAAEIAVNNGKVQLIAASIDPSLGSEVIDAEGAFI----TPILPGVSDADLV 66

Query: 107 LDDPGRTEWEG 117
           +  P  ++ E 
Sbjct: 67  IWYPDDSKKEY 77

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	399
d1nfga2	330	D-hydantoinase {Burkholderia pickettii [TaxId: 329	100.0
d2ftwa2	334	Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli	100.0
d1gkra2	325	L-hydantoinase {Arthrobacter aurescens [TaxId: 436	100.0
d1kcxa2	334	Dihydropyrimidinase related protein-1 {Mouse (Mus	100.0
d1ynya2	332	D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}	100.0
d2fvka2	384	Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc	100.0
d1gkpa2	335	D-hydantoinase {Thermus sp. [TaxId: 275]}	100.0
d1xrta2	310	Two-domain dihydroorotase {Aquifex aeolicus [TaxId	100.0
d2eg6a1	343	Dihydroorotase {Escherichia coli [TaxId: 562]}	100.0
d1i0da_	331	Phosphotriesterase (parathion hydrolase, PTE) {Pse	99.79
d1ejxc1	181	alpha-Subunit of urease {Klebsiella aerogenes [Tax	99.68
d1onwa1	105	Isoaspartyl dipeptidase {Escherichia coli [TaxId:	99.6
d2p9ba1	118	Uncharacterized protein BL1453 {Bifidobacterium lo	99.57
d1yrra1	85	N-acetylglucosamine-6-phosphate deacetylase, NagA	99.57
d2fvka1	156	Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Sacc	99.51
d1nfga1	127	D-hydantoinase {Burkholderia pickettii [TaxId: 329	99.51
d1m7ja3	358	N-acyl-D-aminoacid amidohydrolase, catalytic domai	99.47
d1ynya1	127	D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}	99.47
d1k1da1	128	D-hydantoinase {Bacillus stearothermophilus [TaxId	99.45
d2r8ca1	102	Uncharacterized protein EAJ56179 {Unidentified org	99.44
d1gkra1	126	L-hydantoinase {Arthrobacter aurescens [TaxId: 436	99.41
d2qs8a1	96	Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId:	99.37
d1gkpa1	123	D-hydantoinase {Thermus sp. [TaxId: 275]}	99.33
d1m7ja1	55	N-acyl-D-aminoacid amidohydrolase {Alcaligenes fae	99.27
d1onwa2	284	Isoaspartyl dipeptidase, catalytic domain {Escheri	99.22
d1kcxa1	142	Dihydropyrimidinase related protein-1 {Mouse (Mus	99.19
d2vhla1	91	N-acetylglucosamine-6-phosphate deacetylase, NagA	99.15
d2i9ua2	310	Guanine deaminase {Clostridium acetobutylicum [Tax	99.12
d2ftwa1	150	Dihydropyrimidine amidohydrolase Pyd2 {Dictyosteli	99.04
d2uz9a2	313	Guanine deaminase {Human (Homo sapiens) [TaxId: 96	98.94
d4ubpc1	180	alpha-Subunit of urease {Bacillus pasteurii [TaxId	98.91
d1p1ma2	281	Hypothetical protein TM0936, probable catalytic do	98.84
d1xrta1	112	Two-domain dihydroorotase {Aquifex aeolicus [TaxId	98.72
d2vhla2	301	N-acetylglucosamine-6-phosphate deacetylase, NagA,	98.69
d2paja2	336	Hypothetical protein GOS_1943094 {Environmental sa	98.67
d1e9yb1	180	alpha-Subunit of urease {Helicobacter pylori [TaxI	98.65
d4ubpc2	390	alpha-subunit of urease, catalytic domain {Bacillu	98.52
d2imra2	308	Hypothetical protein DR0824 {Deinococcus radiodura	98.42
d1e9yb2	389	alpha-subunit of urease, catalytic domain {Helicob	98.4
d1ejxc2	385	alpha-subunit of urease, catalytic domain {Klebsie	98.38
d1bf6a_	291	Phosphotriesterase homology protein {Escherichia c	98.27
d2icsa2	267	Putative adenine deaminase EF0837 {Enterococcus fa	98.26
d2bb0a2	300	Imidazolonepropionase {Bacillus subtilis [TaxId: 1	98.12
d2puza2	301	Imidazolonepropionase {Agrobacterium tumefaciens [	98.06
d1o12a2	288	N-acetylglucosamine-6-phosphate deacetylase, NagA,	98.05
d2puza1	103	Imidazolonepropionase {Agrobacterium tumefaciens [	98.03
d1ra0a2	320	Cytosine deaminase catalytic domain {Escherichia c	97.93
d1xwya1	260	Deoxyribonuclease TatD (MttC) {Escherichia coli [T	97.75
d2q09a2	301	Probable 4-imidazolone-5-propanoate amidohydrolase	97.73
d1yixa1	265	Putative deoxyribonuclease YcfH {Escherichia coli	97.66
d1j6oa_	260	Hypothetical protein TM0667 {Thermotoga maritima [	97.62
d2r8ca2	311	Uncharacterized protein EAJ56179 {Unidentified org	97.6
d1zzma1	259	Putative deoxyribonuclease YjjV {Escherichia coli	97.57
d1o12a1	76	N-acetylglucosamine-6-phosphate deacetylase, NagA	97.55
d2ooda2	325	Guanine deaminase {Bradyrhizobium japonicum [TaxId	97.49
d2p9ba2	324	Uncharacterized protein BL1453 {Bifidobacterium lo	97.44
d2qs8a2	310	Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId:	97.43
d1yrra2	297	N-acetylglucosamine-6-phosphate deacetylase, NagA,	97.38
d2q09a1	103	Probable 4-imidazolone-5-propanoate amidohydrolase	97.05
d3be7a2	303	Zn-dependent arginine carboxypeptidase {Unidentifi	97.01
d2icsa1	101	Putative adenine deaminase EF0837 {Enterococcus fa	96.62
d1ra0a1	103	Cytosine deaminase {Escherichia coli [TaxId: 562]}	96.59
d2f6ka1	306	Putative amidohydrolase LP2961 {Lactobacillus plan	96.52
d2hbva1	331	2-amino-3-carboxymuconate 6-semialdehyde decarboxy	95.59
d2dvta1	325	Thermophilic reversible gamma-resorcylate decarbox	95.46
d2gwga1	342	4-oxalomesaconate hydratase LigJ {Rhodopseudomonas	91.52
d1a4ma_	349	Adenosine deaminase (ADA) {Mouse (Mus musculus) [T	90.37
d2ooda1	140	Guanine deaminase {Bradyrhizobium japonicum [TaxId	89.26
d2ffia1	271	Putative 2-pyrone-4,6-dicarboxylic acid hydrolase	88.85
d3be7a1	95	Zn-dependent arginine carboxypeptidase {Unidentifi	88.76
d1xp3a1	297	Endonuclease IV {Bacillus anthracis [TaxId: 1392]}	83.72
d2amxa1	357	Adenosine deaminase (ADA) {Plasmodium yoelii [TaxI	82.64
d1qtwa_	285	Endonuclease IV {Escherichia coli [TaxId: 562]}	81.23

>d1nfga2 c.1.9.6 (A:52-381) D-hydantoinase {Burkholderia pickettii [TaxId: 329]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Burkholderia pickettii [TaxId: 329]

Probab=100.00  E-value=1.6e-55  Score=415.28  Aligned_cols=284  Identities=26%  Similarity=0.374  Sum_probs=248.0

Q ss_pred             ceeecccccCCC--CCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCCh
Q 015826           99 GLIDVHAHLDDP--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA  176 (399)
Q Consensus        99 GlID~H~H~~~~--~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (399)
                      |+||+|||+++|  +..++|++.+++++|+.||||||++|| ++.|...+.+.++.+.+.+.....+|+++++.+.....
T Consensus         1 G~ID~HvH~r~p~~g~~~~Ed~~tgs~AAa~GGvTtv~~mp-n~~p~~~~~e~~~~~~~~a~~~s~~d~~~~~~~~~~~~   79 (330)
T d1nfga2           1 GGIDVHTHVETVSFNTQSADTFATATVAAACGGTTTIVDFC-QQDRGHSLAEAVAKWDGMAGGKSAIDYGYHIIVLDPTD   79 (330)
T ss_dssp             CEEEEEECCSCEETTEECSCCHHHHHHHHHHTTEEEEEEEE-ECCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECSSCCH
T ss_pred             CcEeCccCCCCCCCCccccchHHHHHHHHHcCCCEEEEECC-CCCCCCCCHHHHHHHHHHHhcCCeeeecceEEEeccch
Confidence            899999999988  446789999999999999999999999 78888888999999988888888999999987766565


Q ss_pred             hhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch---hHHhhccCcCCchhh
Q 015826          177 YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRSY  253 (399)
Q Consensus       177 ~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---~~~~~~~~~~~~~~~  253 (399)
                      ...++++.+.+.|+.++|+|+...+   ....+...+.+++++++++|.++.+|+|++..+.   +.++..    +..+.
T Consensus        80 ~~~~el~~~~~~Gv~~~k~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~h~E~~~~~~~~~~~~~~~----g~~~~  152 (330)
T d1nfga2          80 SVIEELEVLPDLGITSFKVFMAYRG---MNMIDDVTLLKTLDKAVKTGSLVMVHAENGDAADYLRDKFVAE----GKTAP  152 (330)
T ss_dssp             HHHHHTTTGGGGTCCEEEEESSSTT---TTBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHHHT----TCCST
T ss_pred             hhHHHHhhhhhhcccceeeeccccc---cCCCCcHHHHHHHHHHHhcCCceeechHHHHHHHHHhhhhhcc----CCcCc
Confidence            5667788888899999999987753   2357889999999999999999999999987654   333433    23444


Q ss_pred             hcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCC
Q 015826          254 STYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPD  333 (399)
Q Consensus       254 ~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~  333 (399)
                      ..++.+||+.+|..++.+++.+++.+       |+++||+|+|++ +++++|+++|++|.+||||||||||+|+++++..
T Consensus       153 ~~~~~~rp~~aE~~av~r~~~la~~~-------~~~lhi~HiSt~-~~~~~i~~ak~~g~~vt~Et~ph~L~l~~~d~~~  224 (330)
T d1nfga2         153 IYHALSRPPRVEAEATARALALAEIV-------NAPIYIVHVTCE-ESLEEVMRAKSRGVRALAETCTHYLYLTKEDLER  224 (330)
T ss_dssp             HHHHHTSCHHHHHHHHHHHHHHHHHH-------TCCEEECCCCSH-HHHHHHHHHHHHTCCEEECEEGGGGTCCGGGGGC
T ss_pred             hhcccccChHHHHHHHHHHHHHHHHh-------CCeeeechhcch-HHHHHHHHHHhcCCcccccccchhhhhhhhhhhc
Confidence            55778999999999999999999987       899999999999 9999999999999999999999999999988754


Q ss_pred             C---CcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCccc-ccCCcCCcccccCCcchhcccc
Q 015826          334 G---DTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPEL-KLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       334 ~---~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~-k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +   ++.+||+||||+++||++||++|++|+||+|+|||+||+.+. |+.+..+|+++|+|++|+|++|
T Consensus       225 ~~~~~~~~k~~PPLR~~~d~~aL~~~l~dG~Id~i~SDHaP~~~~~~~~~~~~~f~~ap~G~~gle~~l  293 (330)
T d1nfga2         225 PDFEGAKYVFTPPARAKKDHDVLWNALRNGVFETVSSDHCSWLFKGHKDRGRNDFRAIPNGAPGVEERL  293 (330)
T ss_dssp             TTTGGGGGCCSSCCCCHHHHHHHHHHHHTTCCSCEECCBCCCCTTTTTTTTTTCGGGSCCCBCCTTTHH
T ss_pred             ccccCceeeecCcCCcHHHHHHHhhhhcCCceeeecCCCCCccchhhHhhccCCHhHCCCCcCHHHHHH
Confidence            3   678999999999999999999999999999999999998643 3444568999999999999975

>d2ftwa2 c.1.9.6 (A:60-393) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Dictyostelium discoideum [TaxId: 44689]

Probab=100.00  E-value=3.6e-55  Score=413.20  Aligned_cols=288  Identities=22%  Similarity=0.264  Sum_probs=250.7

Q ss_pred             cceeecccccCCC--CCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCC
Q 015826           98 PGLIDVHAHLDDP--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN  175 (399)
Q Consensus        98 PGlID~H~H~~~~--~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (399)
                      ||+||+|||+++|  |..++|++++++++|++||||||++|| ++.|...+.+.++.+.+.+...+.++|.+++.+....
T Consensus         1 PG~ID~HvH~reP~~G~~~kEd~~tgs~AAa~GGvTtv~~mp-n~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~   79 (334)
T d2ftwa2           1 PGGIDTHTHFQLPFMGTVSVDDFDIGTQAAVAGGTTFIIDFV-IPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAITWWS   79 (334)
T ss_dssp             ECEEEEEECTTCEETTEECSSCHHHHHHHHHHTTEEEEEEEE-CCCTTCCHHHHHHHHHHHHHTTCSSEEEEEEECCSCC
T ss_pred             CCeEcceecCCCCCCCCcccccHHHHHHHHHhCCCeEEEECC-CCCCCCCcHHHHHHHHHHHhcCCcceeeEEEeecCcc
Confidence            9999999999998  888899999999999999999999999 7778788889999888888888889999998887666


Q ss_pred             hhhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhh
Q 015826          176 AYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYS  254 (399)
Q Consensus       176 ~~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~  254 (399)
                      ....+++..+.+ .|+.++|+|+....   ....+++.+.++++.++++|.++.+|+|+...+..+..... +.+..+..
T Consensus        80 ~~~~~e~~~l~~~~g~~~~k~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~H~E~~~~~~~~~~~~~-~~g~~~~~  155 (334)
T d2ftwa2          80 EQVSREMEILVKERGVNSFKCFMAYKN---SFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQKKML-EMGITGPE  155 (334)
T ss_dssp             HHHHHHHHHHHHHSCCCEEEEESSCTT---TTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHH-HTTCCSTH
T ss_pred             hhhhHhHHHHHHhcCccccceeecccc---ccccccHHHHHHHHHHhhcCCceeecchhHHHHhhcchhhh-ccCCCCcc
Confidence            666677877764 68999999987642   23568889999999999999999999999987654432211 12334445


Q ss_pred             cCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCC
Q 015826          255 TYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDG  334 (399)
Q Consensus       255 ~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~  334 (399)
                      .|+.+||+.+|..++.+++.+++++       |+++||+|+|+. +++++|+++|++|.+||||+|||||+++++++..+
T Consensus       156 ~~~~~rp~~aE~~~v~r~~~la~~~-------~~~lhi~HiSt~-~~~~~i~~ak~~G~~vt~e~~ph~L~l~~~~~~~~  227 (334)
T d2ftwa2         156 GHELSRPEALEAEATNRAIVIADSV-------CTPVYIVHVQSI-GAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNH  227 (334)
T ss_dssp             HHHHHSCTHHHHHHHHHHHHHHHHH-------TCCEEECSCCCH-HHHHHHHHHHHTTCCEEECCBHHHHHCCGGGGGCS
T ss_pred             cccccCcHHHHHHHHHHHHHHHHhh-------ccceeeccccch-hhhhhHHHhcccCCceeeccccceeeccHHHHhcc
Confidence            6777899999999999999999987       899999999999 99999999999999999999999999999887544


Q ss_pred             ----CcceEEcCCCCCh-hhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          335 ----DTRFKCAPPIRDA-ANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       335 ----~~~~~~~Pplr~~-~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                          +..+|++||||++ ++|++||++|.+|+||+|+|||+||+.++|..++++|+++|+|++|+|++|
T Consensus       228 d~~~~~~~~~~PPlR~~~~d~~~L~~~l~~G~Id~iaSDHaPh~~e~K~~~~~~f~~a~~Gi~glet~l  296 (334)
T d2ftwa2         228 DWRHAAAFVMGPPIRPDPRTKGVLMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNGVEDRM  296 (334)
T ss_dssp             SHHHHHTTCCSSCCCCCTTHHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGTTCGGGSCCCBCCTTTHH
T ss_pred             chhhccceEeeccccccHhhhhhHHHHhhCCCccceecCCCCCCHHHHhcCCCChhhCCCCccCHHHHH
Confidence                3578999999976 689999999999999999999999999999887789999999999999975

>d1gkra2 c.1.9.6 (A:55-379) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: L-hydantoinase
species: Arthrobacter aurescens [TaxId: 43663]

Probab=100.00  E-value=4e-55  Score=412.63  Aligned_cols=287  Identities=30%  Similarity=0.446  Sum_probs=249.6

Q ss_pred             ceeecccccCCCCCCCcC-chHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChh
Q 015826           99 GLIDVHAHLDDPGRTEWE-GFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY  177 (399)
Q Consensus        99 GlID~H~H~~~~~~~~~e-~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (399)
                      |+||+|+|+++++...++ ++++++++|+.||||||++|| |+.|...+.+.+..+.+.+.....+++.++++.....  
T Consensus         1 G~ID~HvH~repg~~~ke~~~~tgs~AAa~GGvTtv~~mP-nt~P~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~--   77 (325)
T d1gkra2           1 GVVDEHVHIIDMDLKNRYGRFELDSESAAVGGITTIIEMP-ITFPPTTTLDAFLEKKKQAGQRLKVDFALYGGGVPGN--   77 (325)
T ss_dssp             CEEEEEEECCCGGGTTTSCCHHHHHHHHHHHTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEEEEECCTTC--
T ss_pred             CcEeCCcCCCCCCCCCcccHHHHHHHHHHccCCceEEECC-CCCCCcCCHHHHHHHHHHhccCCcccccccccccccc--
Confidence            899999999999888776 599999999999999999999 8889888889999888888878889999988766543  


Q ss_pred             hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCC
Q 015826          178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL  257 (399)
Q Consensus       178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (399)
                       ...+..+...|+.+++.++...........++..+.++++.++++|.++.+|+|+.+.+....+... ..+..+...+.
T Consensus        78 -~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~H~E~~~l~~~~~~~~~-~~g~~~~~~~~  155 (325)
T d1gkra2          78 -LPEIRKMHDAGAVGFKSMMAASVPGMFDAVSDGELFEIFQEIAACGSVIVVHAENETIIQALQKQIK-AAGGKDMAAYE  155 (325)
T ss_dssp             -HHHHHHHHHTTCCEEEEESSCSBTTTBCBCCHHHHHHHHHHHHHHTCEEEEECCCHHHHHHHHHHHH-HTTCCSHHHHH
T ss_pred             -HHHHHhhhhcccceeccccccccCCccccccHHHHHHHHHHHHhcCCceEeccCcHHHHHHHHHHhh-hcCCccccccc
Confidence             4566677788999999887654333334568889999999999999999999999887543221111 22334455666


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcc
Q 015826          258 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR  337 (399)
Q Consensus       258 ~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~  337 (399)
                      .+||..+|..++.+.+.+++++       ++++||+|+|++ +++++|+++|++|.+||||||||||+++++++..++++
T Consensus       156 ~~rp~~aE~~~v~r~~~la~~~-------~~~~hi~hiSs~-~~l~~i~~ak~~g~~vt~et~ph~L~lt~~~~~~~~~~  227 (325)
T d1gkra2         156 ASQPVFQENEAIQRALLLQKEA-------GCRLIVLHVSNP-DGVELIHQAQSEGQDVHCESGPQYLNITTDDAERIGPY  227 (325)
T ss_dssp             HHSCHHHHHHHHHHHHHHHHHH-------CCEEEECCCCSH-HHHHHHHHHHHTTCCEEEEECHHHHSCCGGGHHHHGGG
T ss_pred             ccCchHHHHHHHHHHHHHhhhc-------CcceeccccccH-HHHHhhhhhhhcCCceEEeecccccccchhhhhccCcc
Confidence            7899999999999999999987       999999999999 99999999999999999999999999999988777889


Q ss_pred             eEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          338 FKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       338 ~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +||+||||+++||++||+++++|+||+|+|||+||+.++|+.+.++|+.+|+|++|+|++|
T Consensus       228 ~k~~PPlR~~~Dr~aL~~al~~G~id~i~SDHaPh~~~~K~~~~~~~~~a~~G~~g~e~~l  288 (325)
T d1gkra2         228 MKVAPPVRSAEMNIRLWEQLENGLIDTLGSDHGGHPVEDKEPGWKDVWKAGNGALGLETSL  288 (325)
T ss_dssp             GCCSSCCCCHHHHHHHHHHHHHTCCCEECCCEECCCGGGTGGGGTCGGGSCCCBCCTTTHH
T ss_pred             cccchhhhhhhhhHHHHHHHhcCcceEEecCCCCCCHHHhccCCCccccCCCCcccHHHHH
Confidence            9999999999999999999999999999999999999999887789999999999999975

>d1kcxa2 c.1.9.6 (A:67-400) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Dihydropyrimidinase related protein-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.6e-55  Score=412.78  Aligned_cols=285  Identities=23%  Similarity=0.298  Sum_probs=250.3

Q ss_pred             cceeecccccCCC--CCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCC
Q 015826           98 PGLIDVHAHLDDP--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPEN  175 (399)
Q Consensus        98 PGlID~H~H~~~~--~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  175 (399)
                      ||+||+|||+++|  |..++|++.+++++|++||||||++|| ++.|...+.+.++.+.+.++..+.++|.+++++...+
T Consensus         1 PG~ID~HvH~reP~~G~~~kEd~~tgs~AAa~GGvTtv~~mP-nt~P~~~~~~~~~~~~~~a~~~s~~d~~~~~~~~~~~   79 (334)
T d1kcxa2           1 PGGIDVNTYLQKPSQGMTSADDFFQGTKAALAGGTTMIIDHV-VPEPGSSLLTSFEKWHEAADTKSCCDYSLHVDITSWY   79 (334)
T ss_dssp             ECEEEEEECTTCEETTEECSSCHHHHHHHHHHTTEEEEEEEE-CCCTTCCHHHHHHHHHHHHHHHCSSEEEEEEEECCCC
T ss_pred             CCeEeeeecCCCCCCCCcccchHHHHHHHHHcCCceEEEECC-CCCCCCCCHHHHHHHHHHhcccCcceeeEeeeeccCC
Confidence            9999999999998  888999999999999999999999999 8888888899999998888888899999999887766


Q ss_pred             hhhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhH---HhhccCcCCch
Q 015826          176 AYNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERH---VKLEDDTLDTR  251 (399)
Q Consensus       176 ~~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~---~~~~~~~~~~~  251 (399)
                      ....+++.++++ .|+.++|+|+...   ..+..+++.+.+++++++++|.++.+|+|+.+.....   +++.    +..
T Consensus        80 ~~~~~el~~l~~~~g~~~~ki~~~~~---~~~~~~~~~l~~~~~~~~~~~~~v~~H~Ed~~l~~~~~~~~~~~----g~~  152 (334)
T d1kcxa2          80 DGVREELEVLVQDKGVNSFQVYMAYK---DLYQMSDSQLYEAFTFLKGLGAVILVHAENGDLIAQEQKRILEM----GIT  152 (334)
T ss_dssp             TTHHHHHHHHHHTTCCCEEEEESCST---TTTCCCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHT----TCC
T ss_pred             cchHHHHHHHHHhccCceeeeeeccC---CCcccCHHHHHHHHHHHhccCceeEEecCCHHHHhccccchhhc----CCc
Confidence            666778888775 5899999998764   2356789999999999999999999999999875433   3332    334


Q ss_pred             hhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccC
Q 015826          252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI  331 (399)
Q Consensus       252 ~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~  331 (399)
                      +...|+.+||+.+|..++.+++++++++       |+++||+|+|++ +++++|+++|++|..+++|+|||||+++...+
T Consensus       153 ~~~~~~~~rp~~aE~~ai~r~~~la~~~-------g~~~hi~HiSt~-~~ve~i~~ak~~g~~vt~e~~~~~l~l~~~~~  224 (334)
T d1kcxa2         153 GPEGHALSRPEELEAEAVFRAIAIAGRI-------NCPVYITKVMSK-SAADIIALARKKGPLVFGEPIAASLGTDGTHY  224 (334)
T ss_dssp             STHHHHHHSCTHHHHHHHHHHHHHHHHH-------TCCEEEEEECCH-HHHHHHHHHHHHSCCEEEEEBHHHHHCCGGGG
T ss_pred             chhhccCCCCHHHHHHHHHHHHHHHhhc-------CCceeeccccch-HHHHHHHHHhccccceeeccchhheeeccccc
Confidence            4456677899999999999999999987       999999999999 99999999999999999999999999998776


Q ss_pred             CCCC----cceEEcCCCC-ChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          332 PDGD----TRFKCAPPIR-DAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       332 ~~~~----~~~~~~Pplr-~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      ...+    ..++++||+| ++++|++||++|++|+||+|+|||+||+.++|..++++|+.+|+||+|+|++|
T Consensus       225 ~~~~~~~~~~~~~~pPlr~~~~d~eaL~~~l~~G~Id~I~SDHaP~~~e~K~~~~~~f~~ap~Gi~g~e~~l  296 (334)
T d1kcxa2         225 WSKNWAKAAAFVTSPPLSPDPTTPDYLTSLLACGDLQVTGSGHCPYSTAQKAVGKDNFTLIPEGVNGIEERM  296 (334)
T ss_dssp             GCSSHHHHHHTCCSSCCCSCTTHHHHHHHHHHHTSSCCCBCCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHH
T ss_pred             ccCChhHhcceEeeeccCchhhhHHHHHHHhhcCCcceEecCCCCCCHHHhccCCCChhhCCCCcccHHHHH
Confidence            5433    3466677776 78899999999999999999999999999999887789999999999999975

>d1ynya2 c.1.9.6 (A:53-384) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Bacillus sp. AR9 [TaxId: 301298]

Probab=100.00  E-value=2.4e-54  Score=407.92  Aligned_cols=284  Identities=28%  Similarity=0.393  Sum_probs=248.2

Q ss_pred             ceeecccccCCC--CCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCCh
Q 015826           99 GLIDVHAHLDDP--GRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENA  176 (399)
Q Consensus        99 GlID~H~H~~~~--~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (399)
                      |+||+|||+++|  +..++|++++++++|+.||||||++|| ++.|...+.+.++.+.+.++....+++++++.+...+.
T Consensus         1 G~ID~HvH~r~p~~g~~~~ed~~tgs~AAa~GGvTtv~~mp-nt~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~~   79 (332)
T d1ynya2           1 GGIDPHTHLDMPFGGTVTADDFFTGTRAAAFGGTTSIVDFC-LTKKGESLKSAIATWHEKARGKAVIDYGFHLMIAEAND   79 (332)
T ss_dssp             CEEEEEECTTCEETTEECSCCHHHHHHHHHHTTEEEEEEEE-CCCSSCCHHHHHHHHHHHHTTTCSSEEEEEEECSCCCH
T ss_pred             CceeCccCCCCCCCCCcccccHHHHHHHHHhCCCcEEEECC-CCCCCCCCHHHHHHHHHHHhccCccceeeEEEEecccc
Confidence            899999999988  778899999999999999999999999 78888889999999999888888999999988776666


Q ss_pred             hhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch---hHHhhccCcCCchh
Q 015826          177 YNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---RHVKLEDDTLDTRS  252 (399)
Q Consensus       177 ~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---~~~~~~~~~~~~~~  252 (399)
                      ....++..+.+ .|+.++|+|+....   .+..+.+.+.+++++++++|+++.+|+|+.+++.   +..+..+    ..+
T Consensus        80 ~~~~el~~~~~~~g~~~~k~~~~~~~---~~~~d~~~l~~~l~~~~~~~~~~~~h~Ed~~~~~~~~~~~~~~g----~~~  152 (332)
T d1ynya2          80 QVLEELESVISSEGITSLKVFMAYKN---VFQADDETLFKTLVKAKELGALVQVHAENGDVLDYLTKKALAEG----NTD  152 (332)
T ss_dssp             HHHHHHHHHHHTSCCCEEEEESCSTT---TTCCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHHHHHHTT----CCS
T ss_pred             chhHHHHHHHhhhcccceeeeecccc---ccccCHHHHHHHHHHHhhcCCEEeechhhHHHHHHHHHHHHhcC----CCC
Confidence            66677777765 58899999987642   3456889999999999999999999999988753   3333332    334


Q ss_pred             hhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCC
Q 015826          253 YSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIP  332 (399)
Q Consensus       253 ~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~  332 (399)
                      ...+..+||+.+|..++.+++.+++++       |+++||+|+|+. +++++|+++|++|.+||||||||||+|+++++.
T Consensus       153 ~~~~~~~~p~~aE~~ai~r~~~la~~~-------g~~~hi~hiSt~-~~~~~i~~ak~~g~~vt~e~~ph~L~l~~~~~~  224 (332)
T d1ynya2         153 PIYHAYTRPPEAEGEATGRAIALTALA-------GSQLYVVHVSCA-SAVQRIAEAREKGWNVYGETCPQYLALDVSIMD  224 (332)
T ss_dssp             TTHHHHTSCHHHHHHHHHHHHHHHHHH-------TCCEEECSCCSH-HHHHHHHHHHHTTCCEEEEECHHHHHCCGGGGC
T ss_pred             chhccccchhhHHHHHHHHHHHhhhhh-------cccccccccccc-hHHHHHHHHHHhCCCceeccccccccCCHHHHh
Confidence            445667899999999999999999987       899999999999 999999999999999999999999999998876


Q ss_pred             CC---CcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccc-cCCcCCcccccCCcchhcccc
Q 015826          333 DG---DTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELK-LLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       333 ~~---~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k-~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      .+   ++++||+||||+++||++||++|++|+||+|+|||+||+.++| +.+.++|+.+|+|++|+|++|
T Consensus       225 ~~~~~g~~~k~~PPLRs~~dr~aL~~al~~G~id~i~SDHaP~~~~~kk~~~~~~f~~a~~G~~g~e~~l  294 (332)
T d1ynya2         225 QPDFEGAKYVWSPPLREKWNQEVLWSALKNGILQTVGSDHCPFNFRGQKELGRGDFTKIPNGGPLIEDRL  294 (332)
T ss_dssp             CSSSGGGGGCCSSCCCCTTHHHHHHHHHHTTSSCEECCCBCCCCTTTTGGGGTTCGGGSCCCBCCTTTHH
T ss_pred             hhhccCceeEecCccccHHHHHHHHHHHhcCCeeEEEecCCCCCHHHHhhccCCCcccCCCccchHHHHH
Confidence            54   5789999999999999999999999999999999999997665 444678999999999999875

>d2fvka2 c.1.9.6 (A:57-440) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

Probab=100.00  E-value=3.6e-54  Score=412.34  Aligned_cols=283  Identities=23%  Similarity=0.335  Sum_probs=231.5

Q ss_pred             ceeecccccCCCCC---CCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHH-----HHHHHhccCceeEEeeee
Q 015826           99 GLIDVHAHLDDPGR---TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKL-----KVDAAEKRIYVDVGFWGG  170 (399)
Q Consensus        99 GlID~H~H~~~~~~---~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~  170 (399)
                      |+||+|+|+++|+.   ..++++++++++|+.||||||++|| ++.|....+..+..     ..+.+.....+||+++..
T Consensus         1 G~ID~HvH~rePg~~~~~~~ed~~tgs~AAa~GGvTtvi~mp-~~~p~~~~~~~~~~~~~~~~~~~a~~~~~vdy~~~~~   79 (384)
T d2fvka2           1 GGIDAHVHVDEPLKLLGDVVDTMEHATRSAVAGGTTTVVAFS-TQDVSKKGPSALAESVKLDVDEYSEQTLYCDYGLHLI   79 (384)
T ss_dssp             CEEECCBCCCCTTCTTSCCSCCHHHHHHHHHHTTEEEEEEEE-ECCTTCCSTTHHHHHHHHHHHHHTTSCCSSEEEEEEE
T ss_pred             CceeCCcCCCCCCCCCCcccchHHHHHHHHHcCCceEEEECC-CCCCCCCCHHHHHHHHHHHHHHHHhcCccceeeEEEE
Confidence            89999999999976   6788999999999999999999999 66665544333322     223445678899999876


Q ss_pred             eeCCChhh--HH------HHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhch---h
Q 015826          171 LVPENAYN--AS------ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSE---R  239 (399)
Q Consensus       171 ~~~~~~~~--~~------~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~---~  239 (399)
                      +.......  ..      .+..+.+.|+.++|+|+.+++    ...+.+.+.+++++++++|.++.+|||+.+.+.   +
T Consensus        80 ~~~~~~~~~~~~el~~~~~~~~~~~~Gv~~~k~f~~~~~----~~~~~~~l~~~l~~~~~~g~~v~~H~Ed~~~~~~~~~  155 (384)
T d2fvka2          80 LFQIEKPSVEARELLDVQLQAAYNDYGVSSVKMFMTYPG----LQISDYDIMSAMYATRKNGFTTMLHAENGDMVKWMIE  155 (384)
T ss_dssp             CCCCCSSHHHHHHHHHHHHHHHHHHHCCCEEEEESSSTT----TBCCHHHHHHHHHHHHHTTCEEEEECCCHHHHHHHHH
T ss_pred             EeCCCCccchHHHHHhHHHHHHcccCcccccceeccccc----cccCHHHHHHHHHHHHhcCCceeeccccHHHHHHHHH
Confidence            65433211  11      122334579999999987653    246888999999999999999999999998765   3


Q ss_pred             HHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEc
Q 015826          240 HVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVET  319 (399)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~  319 (399)
                      .+++.+    ..+...++.+||..+|..++.+++.+++++       |+|+||+|+|+. +++++|+++|++|++|||||
T Consensus       156 ~~~~~g----~~~~~~~~~~rP~~aE~~av~r~~~la~~~-------g~~lhi~HiSt~-~~ve~I~~ak~~G~~Vt~Et  223 (384)
T d2fvka2         156 ALEEQG----LTDAYYHGVSRPSIVEGEATNRAITLATTM-------DTPILFVHVSSP-QAAEVIKQAQTKGLKVYAET  223 (384)
T ss_dssp             HHHHTT----CCSTTHHHHTSCHHHHHHHHHHHHHHHHHT-------TCCEEECSCCCH-HHHHHHHHHHHHTCCEEEEE
T ss_pred             HHhhcC----CCChhhcccccccchhhHHHHHHHHHHHhc-------CceEEecccccc-hhhHHHHHhhhcCCCEEEEe
Confidence            334333    344556778999999999999999999986       999999999999 99999999999999999999


Q ss_pred             cccccccccccC------------------------------CCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCC
Q 015826          320 CPHYLAFSAEEI------------------------------PDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDH  369 (399)
Q Consensus       320 ~p~~L~~~~~~~------------------------------~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh  369 (399)
                      |||||+|+++.+                              ...|+.+||+||||+++||++||++|++|+||+|+|||
T Consensus       224 ~ph~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~k~~PPLR~~~dr~aL~~~l~dG~Id~IaSDH  303 (384)
T d2fvka2         224 CPQYALLSDAITRCHHHGEVESYGVGIDLSSISESPFTNPDDRFIGSKYICSPPIRPEGTQKSIWKGMNNGTFTIVGSDH  303 (384)
T ss_dssp             CHHHHHCCGGGGSCC--------CCSCCGGGSSSSTTTCTTCTTGGGGGCCSSCCCCTTSHHHHHHHHHHTSCSEECCCB
T ss_pred             ChHHhhccchhhcccccccccccccccccccccccccccccccccCceeEEcCCCCCHHHHHHHHHHhhCCceeEEecCC
Confidence            999999997643                              23467899999999999999999999999999999999


Q ss_pred             CCCCcccccCC-------------cCCcccccCCcchhcccc
Q 015826          370 SPTVPELKLLD-------------EGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       370 ~p~~~~~k~~~-------------~~~~~~~~~G~~g~e~~l  398 (399)
                      +||+.++|..+             +++|+.+|+|++|+|++|
T Consensus       304 aP~~~~eK~~~~~~~~~~~~~~~~~~df~~ap~G~~gle~~l  345 (384)
T d2fvka2         304 CSYNYYEKTSTASKHRAFDPENNKNGEFRYIPNGLPGVCTRM  345 (384)
T ss_dssp             CCCBSSCCSSTTBGGGGEEGGGTEESCGGGSCCCBCCTTTHH
T ss_pred             CCCCHHHhcccccccccccccccccCccccCCCCCccHHHHH
Confidence            99999988653             248999999999999975

>d1gkpa2 c.1.9.6 (A:55-389) D-hydantoinase {Thermus sp. [TaxId: 275]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: D-hydantoinase
species: Thermus sp. [TaxId: 275]

Probab=100.00  E-value=3.1e-53  Score=400.98  Aligned_cols=286  Identities=26%  Similarity=0.323  Sum_probs=251.0

Q ss_pred             eeecccccCCCCCC--CcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChh
Q 015826          100 LIDVHAHLDDPGRT--EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAY  177 (399)
Q Consensus       100 lID~H~H~~~~~~~--~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  177 (399)
                      |||+|||+++|+..  .+|++++++++|+.|||||++||+ ++.|...+.+.++..++.+.....+++.++.++...+..
T Consensus         1 lID~HvH~~~p~~~~~~ked~~sgs~AAa~GGvTtv~dmp-n~~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~~~~~~~~   79 (335)
T d1gkpa2           1 FIDPHVHIYLPFMATFAKDTHETGSKAALMGGTTTYIEMC-CPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAVSKFDEK   79 (335)
T ss_dssp             EEEEEECSSCEETTEECSCCHHHHHHHHHHTTEEEEEEEE-CCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECCCCCTT
T ss_pred             CcCcccccCCCCCCCccccHHHHHHHHHHhCCCeEEEECC-CCCCCCChHHHHHHHHHHHhcCCccceeeEEEEeccccc
Confidence            89999999998554  579999999999999999999999 777777888999988888888899999999888776666


Q ss_pred             hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCC
Q 015826          178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL  257 (399)
Q Consensus       178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (399)
                      ...++.++.+.|+.++|+++...   +.+..++..+.++++.++++|.++.+|+++............ ..+..+...++
T Consensus        80 ~~~el~~l~~~G~~~~k~~~~~~---~~~~~d~~~l~~~~~~~~~~~~~v~~h~ed~~l~~~~~~~~~-~~~~~~~~~~~  155 (335)
T d1gkpa2          80 TEGQLREIVADGISSFKIFLSYK---NFFGVDDGEMYQTLRLAKELGVIVTAHCENAELVGRLQQKLL-SEGKTGPEWHE  155 (335)
T ss_dssp             HHHHHHHHHHTTCCEEEEEECST---TTTBCCHHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHH-HTTCCSGGGTT
T ss_pred             cHHHHHHHHhhhccccccccccC---CCccCCHHHHHHHHHHhhhcCCEEEEcCCcHHHHHHHHhhhh-cccccCccccc
Confidence            77889999999999999998764   345679999999999999999999999999876432111111 22334556778


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCC--
Q 015826          258 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGD--  335 (399)
Q Consensus       258 ~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~--  335 (399)
                      .++|+.+|..++.+++.+++++       ++++||+|+|+. +++++|+.+|++|.+|+||+|||||+++++.+...+  
T Consensus       156 ~~~p~~~E~~av~r~~~la~~~-------~~~~hi~HiSt~-~~l~~i~~ak~~g~~it~e~~~~hl~l~~~~~~~~~~~  227 (335)
T d1gkpa2         156 PSRPEAVEAEGTARFATFLETT-------GATGYVVHLSCK-PALDAAMAAKARGVPIYIESVIPHFLLDKTYAERGGVE  227 (335)
T ss_dssp             TTSCHHHHHHHHHHHHHHHHHH-------TCEEEECSCCSH-HHHHHHHHHHHTTCCEEEEEEHHHHHCCGGGGGSCHHH
T ss_pred             cchhhhhHHHHHHHHHHHHHHh-------Ccccchhhhhhh-hhhhhhhhhhhcCceEEeecccchhhcCHHHHhcCCch
Confidence            8999999999999999999987       999999999999 999999999999999999999999999988776543  


Q ss_pred             -cceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          336 -TRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       336 -~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                       .++|++||||++++|++||+++++|+||+|+|||+||+.++|..++++|+.+|+|++|+|++|
T Consensus       228 ~~~~k~~PPlRs~~d~~~L~~al~~G~id~i~SDHaP~~~e~K~~~~~~~~~~~~G~~gle~~l  291 (335)
T d1gkpa2         228 AMKYIMSPPLRDKRNQKVLWDALAQGFIDTVGTDHCPFDTEQKLLGKEAFTAIPNGIPAIEDRV  291 (335)
T ss_dssp             HHTTCCSSCCCCTHHHHHHHHHHHTTSSCEEECCBCCCCHHHHGGGSSCGGGSCCCBCCTTTHH
T ss_pred             hcceecccCCCCHHHHHHHHHHHhcCCccEEEecCCCCCHHHhccCCCChhhCCCChhHHHHHH
Confidence             478999999999999999999999999999999999999999887789999999999999975

>d1xrta2 c.1.9.6 (A:56-365) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase), catalytic domain
domain: Two-domain dihydroorotase
species: Aquifex aeolicus [TaxId: 63363]

Probab=100.00  E-value=1.8e-50  Score=378.61  Aligned_cols=275  Identities=29%  Similarity=0.397  Sum_probs=193.4

Q ss_pred             ceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC-Chh
Q 015826           99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE-NAY  177 (399)
Q Consensus        99 GlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  177 (399)
                      |+||+|+|+++||...+|++++++++|+.||||||++|| |+.|...+.+.++.+.+.......+++.+++.+... ..+
T Consensus         1 G~ID~HvHlr~PG~~~~ed~~tgs~AAa~GGvTtv~~mP-nt~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   79 (310)
T d1xrta2           1 GFIDIHVHLRDPGQTYKEDIESGSRCAVAGGFTTIVCMP-NTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTITKGRKGK   79 (310)
T ss_dssp             CEEEEEECCCTTTCTTTCCHHHHHHHHHHTTEEEEEECS-CSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCSBGGGCSS
T ss_pred             CcEeCcccCCCCCccccccHHHHHHHHHhCCCCEEEECC-CCCCCCCCHHHHHHHHHHhhccCCcccccceeeccCCccc
Confidence            899999999999999999999999999999999999999 888888888888888887777777888887766543 222


Q ss_pred             hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCC
Q 015826          178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYL  257 (399)
Q Consensus       178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (399)
                      ...++..+...|+..+   +..    ..+..+...+.++++.++++|.++.+|+++....... ++.    +......++
T Consensus        80 ~~~~~~~~~~~g~~~f---~~~----~~~~~d~~~l~~~~~~~~~~~~~~~~h~e~~~~~~~~-~~~----~~~~~~~~~  147 (310)
T d1xrta2          80 EIADFYSLKEAGCVAF---TDD----GSPVMDSSVMRKALELASQLGVPIMDHCEDDKLAYGV-INE----GEVSALLGL  147 (310)
T ss_dssp             SBCCHHHHHHHTCCCB---CCT----TSCCCCHHHHHHHHHHHHHHTCEEEECCCGGGGTC-------------------
T ss_pred             hhhhhhhcccCcEEEE---ECC----CCCccCHHHHHHHHHHhhhhhhhhhhccchhhhhhhh-hhh----hhcccccCc
Confidence            2344556666676443   221    2345789999999999999999999999997764432 222    223344567


Q ss_pred             CCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcc
Q 015826          258 KTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTR  337 (399)
Q Consensus       258 ~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~  337 (399)
                      .+||+.+|..++.+.+.+++.+       ++|+|++|+|+. +++++|+.+|++|.+||+|||||||+++++++...+++
T Consensus       148 ~~rp~~~E~~ai~r~~~la~~~-------~~~~~i~HiSt~-~~l~~i~~a~~~g~~vt~e~~ph~L~l~~~~~~~~~~~  219 (310)
T d1xrta2         148 SSRAPEAEEIQIARDGILAQRT-------GGHVHIQHVSTK-LSLEIIEFFKEKGVKITCEVNPNHLLFTEREVLNSGAN  219 (310)
T ss_dssp             ------CHHHHHHHHHHHHHHH-------CCEEEESCCCSH-HHHHHHHHHHHTTCCEEEEECGGGGC------------
T ss_pred             cccchHHHHHHHHHHHHHHhhc-------CCeeeccccchH-HHHHHHHHHHHcCCceecchHHHHhhccccccccccch
Confidence            8999999999999999999986       999999999999 99999999999999999999999999999988878889


Q ss_pred             eEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          338 FKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       338 ~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      +||+||||+++||++||++|++|.||+|+|||+||+.++|+    .|+.+++|++|+|++|
T Consensus       220 ~k~~PplR~~~d~~aL~~al~~G~id~i~SDHaPh~~~~K~----~~~~~~~G~~g~e~~l  276 (310)
T d1xrta2         220 ARVNPPLRKKEDRLALIEGVKRGIIDCFATDHAPHQTFEKE----LVEFAMPGIIGLQTAL  276 (310)
T ss_dssp             ----------CCHHHHHHHHHHTCSCEECCCBCCCCC---------------CCCCGGGHH
T ss_pred             hhhcccCCCHHHHHHHHHHHhcCCCeEEecCCCCCCHHHcc----CcccCCCCceeHHHHH
Confidence            99999999999999999999999999999999999998885    4778899999999975

>d2eg6a1 c.1.9.4 (A:4-346) Dihydroorotase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Dihydroorotase
domain: Dihydroorotase
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1.7e-35  Score=280.26  Aligned_cols=261  Identities=17%  Similarity=0.156  Sum_probs=195.9

Q ss_pred             EecceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHh--ccCceeEEeeeeeeC
Q 015826           96 IMPGLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAE--KRIYVDVGFWGGLVP  173 (399)
Q Consensus        96 vlPGlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  173 (399)
                      =+|--.|+|||+++      ++.+..+.+++++|+|+|++|| |+.|+..+.+.+..+.+.+.  .....++.++..+..
T Consensus         5 ~~~~~~D~HvH~Re------g~~~~~t~aa~agG~t~v~~MP-NT~Ppi~t~e~~~~~~~ri~~~~~~~~~~~~~~~~~~   77 (343)
T d2eg6a1           5 KIRRPDDWHLHLRD------GDMLKTVVPYTSEIYGRAIVMP-NLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLMTCYL   77 (343)
T ss_dssp             EEECCCEEEECCCS------HHHHHHHHHHHHTTCSEEEECC-CCSSCCCSHHHHHHHHHHHHHHSCTTCCCEEEEEEEC
T ss_pred             EECCCCcceEecCC------CchHhHHHHHHhccCCEEEECC-CCCCCCCCHHHHHHHHHHHHHhccccCceeeeeeeec
Confidence            35667899999986      3456678889999999999999 99999999998877655432  222334444443333


Q ss_pred             CChhhHHHHHHHHHcCC-cEEEEeecCCC-CCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCch
Q 015826          174 ENAYNASALEALLNAGV-LGLKSFMCPSG-INDFPMTNASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTR  251 (399)
Q Consensus       174 ~~~~~~~~l~~l~~~G~-~~ik~~~~~~~-~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~  251 (399)
                      ........+.+....+. ..++.+..... .......+...+...++.+++.+..+..|++..+.               
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~---------------  142 (343)
T d2eg6a1          78 TDSLDPNELERGFNEGVFTAAKLYPANATTNSSHGVTSVDAIMPVLERMEKIGMPLLVHGEVTHA---------------  142 (343)
T ss_dssp             CTTCCHHHHHHHHHTTSEEEEEECCCCTTSCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCCCCT---------------
T ss_pred             cCCCChhhhhhhhhccccccccccccchhccccccccchHHHHHHHHHHHHhCchhhhcCccccc---------------
Confidence            33223445555555443 34555443211 11223456678888999999999999999976542               


Q ss_pred             hhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccC
Q 015826          252 SYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEI  331 (399)
Q Consensus       252 ~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~  331 (399)
                          +...++..+|..++.+.+.+++.+       ++++||+|+|++ +++++++   ++|.+||||||||||+|+.+++
T Consensus       143 ----~~~~~~~eae~~~~~~~~~l~~~~-------~~~~Hi~HiSt~-~~v~~ir---~~~~~vt~EvtPHhL~L~~~d~  207 (343)
T d2eg6a1         143 ----DIDIFDREARFIESVMEPLRQRLT-------ALKVVFEHITTK-DAADYVR---DGNERLAATITPQHLMFNRNHM  207 (343)
T ss_dssp             ----TSCGGGHHHHHHHHTHHHHHHHCT-------TCCEEECSCCSH-HHHHHHH---TSCTTEEEEECHHHHHCCHHHH
T ss_pred             ----cccccchhhhhHHHHHHHHHhhcc-------CceEEEEecchh-HHHHHHH---hcCCCcceeecCcHHHhhhhhh
Confidence                223566678888899998888864       899999999998 8877775   4566899999999999999877


Q ss_pred             CCC--CcceEEcCCCCChhhHHHHHHHHhcCCc-cEEeCCCCCCCcccccCCcCCcccccCCcchhcccc
Q 015826          332 PDG--DTRFKCAPPIRDAANKEKLWEALMDGHI-DMLSSDHSPTVPELKLLDEGNFLKAWGGISSLQVGY  398 (399)
Q Consensus       332 ~~~--~~~~~~~Pplr~~~~~~~l~~~l~~G~i-d~i~sdh~p~~~~~k~~~~~~~~~~~~G~~g~e~~l  398 (399)
                      ...  ++.+|||||||++++|++||+++.+|.| |+++|||+||+.++|.     +..+++|++|+|+.+
T Consensus       208 ~~~~~~~~~k~nPPlR~~~d~~~l~~~~~~g~i~d~iatDHaPh~~e~K~-----~~~~~~g~~g~e~~l  272 (343)
T d2eg6a1         208 LVGGVRPHLYCLPILKRNIHQQALRELVASGFNRVFLGTDSAPHARHRKE-----SSCGCAGCFNAPTAL  272 (343)
T ss_dssp             HTTSBCGGGCCSSCCCCHHHHHHHHHHHHTTCTTEEECCCBCCCCHHHHS-----STTBCCCCCCTTTHH
T ss_pred             hcCCCccceeeeccccccchhhHHHHHHHcCCCeeeeecCCCCccccccc-----ccccccccCChHHHH
Confidence            443  4678999999999999999999999877 6899999999988885     556899999999865

>d1i0da_ c.1.9.3 (A:) Phosphotriesterase (parathion hydrolase, PTE) {Pseudomonas diminuta [TaxId: 293]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Phosphotriesterase-like
domain: Phosphotriesterase (parathion hydrolase, PTE)
species: Pseudomonas diminuta [TaxId: 293]

Probab=99.79  E-value=8.6e-21  Score=176.43  Aligned_cols=253  Identities=14%  Similarity=0.077  Sum_probs=160.1

Q ss_pred             ceeecccccCCCCCC----------C----cCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCcee
Q 015826           99 GLIDVHAHLDDPGRT----------E----WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVD  164 (399)
Q Consensus        99 GlID~H~H~~~~~~~----------~----~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (399)
                      ||||+|+|+..+...          .    .+++.+..+++.++||||++++...  +...+.+.+....+......++.
T Consensus        16 G~~d~H~Hl~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~a~~~GvttvVd~~~~--~~~~d~~~l~~~~~~~~~~~~~~   93 (331)
T d1i0da_          16 GFTLTHEHICGSSAGFLRAWPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTF--DIGRDVSLLAEVSRAADVHIVAA   93 (331)
T ss_dssp             CSEEEEECSEECCTTHHHHCGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCG--GGTCCHHHHHHHHHHHTCEEECE
T ss_pred             CCEeeeeCcccCcccccccCccccccHHHHHHHHHHHHHHHHHcCCCEEEEcCCC--CCcCCHHHHHHHHHhcCCCEEEE
Confidence            999999999754211          0    1234455778889999999998622  22334566666555554444555


Q ss_pred             EEeeeeeeCC-ChhhHHHHHHHH----HcC-------CcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015826          165 VGFWGGLVPE-NAYNASALEALL----NAG-------VLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE  232 (399)
Q Consensus       165 ~~~~~~~~~~-~~~~~~~l~~l~----~~G-------~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~  232 (399)
                      ++++...... .....+++.++.    ..+       ...++......    ......+.+++.++.++++|.++++|++
T Consensus        94 ~g~h~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~g~pv~~h~~  169 (331)
T d1i0da_          94 TGLWFDPPLSMRLRSVEELTQFFLREIQYGIEDTGIRAGIIKVATTGK----ATPFQELVLKAAARASLATGVPVTTHTA  169 (331)
T ss_dssp             EECCSCCCHHHHTCCHHHHHHHHHHHHHTCBTTTTBCCSEEEEECSSS----CCHHHHHHHHHHHHHHHHHCCCEEEECC
T ss_pred             EEEecCcCcccCccCHHHHHHHHHHhhhhhhccccCccceeecccccc----ccHHHHHHHHHHHHHHHHhCCeEEeecc
Confidence            5554321110 011223333332    221       22334332221    0112356678889999999999999997


Q ss_pred             ChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCChhHHHHHHHHHHHCC
Q 015826          233 MEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDASSSLDLLMEAKTNG  312 (399)
Q Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~~~~l~~i~~ak~~G  312 (399)
                      ....                            +...+.+.+..+..       .+.++++.|+++. .+++.+++++++|
T Consensus       170 ~~~~----------------------------~~~~~~~~~~~~~~-------~~~~~~i~H~~~~-~~~~~~~~~~~~g  213 (331)
T d1i0da_         170 ASQR----------------------------DGEQQAAIFESEGL-------SPSRVCIGHSDDT-DDLSYLTALAARG  213 (331)
T ss_dssp             GGGT----------------------------HHHHHHHHHHHTTC-------CGGGEEECSGGGC-CCHHHHHHHHHTT
T ss_pred             chhh----------------------------hhhhhhhhhhhccc-------CCcceEEEecCCc-chHHHHHHHHhcC
Confidence            5321                            12234444554443       3778999999977 7899999999999


Q ss_pred             CCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCCCCCcccccCCcCCcccccCCcc
Q 015826          313 DSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHSPTVPELKLLDEGNFLKAWGGIS  392 (399)
Q Consensus       313 ~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~p~~~~~k~~~~~~~~~~~~G~~  392 (399)
                      ..+++++||||+++..+.....+...+++||+|.+..|+++|+++.++.  +++|||.++....+. + .+....+.|++
T Consensus       214 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~l~~g~~d~i--~~~tD~p~~~p~~~~-~-~~~~~~~~g~~  289 (331)
T d1i0da_         214 YLIGLDHIPHSAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQI--LVSNDWLFGFSSYVT-N-IMDVMDRVNPD  289 (331)
T ss_dssp             CEEEECCTTCCCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGE--EECCCCCSEECSSST-T-HHHHHHHHCTT
T ss_pred             CceeecceeeeccchhhhccccCCccCCChhhhHHHHHHHHHhcCCCCE--EECCCCCCccccccc-C-CCccccccCCC
Confidence            9999999999999887665444556778898888888888877765543  799999654433221 1 12334567888


Q ss_pred             hhccc
Q 015826          393 SLQVG  397 (399)
Q Consensus       393 g~e~~  397 (399)
                      |++++
T Consensus       290 g~~~~  294 (331)
T d1i0da_         290 GMAFI  294 (331)
T ss_dssp             GGGHH
T ss_pred             cHHHH
Confidence            88765

>d1ejxc1 b.92.1.1 (C:1002-1129,C:1423-1475) alpha-Subunit of urease {Klebsiella aerogenes [TaxId: 28451]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: alpha-Subunit of urease
domain: alpha-Subunit of urease
species: Klebsiella aerogenes [TaxId: 28451]

Probab=99.68  E-value=3.9e-18  Score=138.73  Aligned_cols=102  Identities=19%  Similarity=0.188  Sum_probs=80.5

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCC-------CCCCCcEEeCCCCEEecceeecccccCCCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPR-------NSKTGQVVDYGEAVIMPGLIDVHAHLDDPGRTE  114 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~-------~~~~~~vID~~G~~vlPGlID~H~H~~~~~~~~  114 (399)
                      ..|++|+|+.|+++.+.+.+||.|+||||++||+...+..       ...+.++||++|++|+||+||+|+|+.+|. ..
T Consensus        64 ~lDlvI~n~~Ivd~~Gi~kaDIgIkdGrI~~IGkagnpd~~d~v~l~~g~~tevIdaeG~ivtpG~ID~HvHf~~p~-~~  142 (181)
T d1ejxc1          64 CVDLVLTNALIVDHWGIVKADIGVKDGRIFAIGKAGNPDIQPNVTIPIGAATEVIAAEGKIVTAGSIEVGKLADLVV-WS  142 (181)
T ss_dssp             SCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECEECTTTCSSCCEECCTTCEEEECTTCEEEECSSCTTSBCCEEE-EC
T ss_pred             cccEEEEccEEcCCCCcEEEEEEEeCCEEEEEecCCCccccCCceeeeccceEEecCCCcEEeeeeeecceEEeeee-ee
Confidence            4699999999999998899999999999999997432110       013678999999999999999999999883 34


Q ss_pred             cCchHHHHHHHHcCCeeeeecCcCCCCCCCC
Q 015826          115 WEGFPSGTKAAAAGGITTLIDMPLNSDPSTI  145 (399)
Q Consensus       115 ~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~  145 (399)
                      ++.+.++...++.+|++++..|+ ++++...
T Consensus       143 ~eal~sG~tt~igGG~~~~gpm~-gTnATt~  172 (181)
T d1ejxc1         143 PAFFGVKPATVIKGGMIAIAPMG-DINASIP  172 (181)
T ss_dssp             GGGTTTSCSEEEETTEEEEEEEC-CTTSSSS
T ss_pred             hhhhccchheEEeCCceEEEECC-CCCCCCC
Confidence            45566666777888888888887 5554433

>d1onwa1 b.92.1.7 (A:1-62,A:347-389) Isoaspartyl dipeptidase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Isoaspartyl dipeptidase
domain: Isoaspartyl dipeptidase
species: Escherichia coli [TaxId: 562]

Probab=99.60  E-value=7.4e-16  Score=117.47  Aligned_cols=85  Identities=18%  Similarity=0.149  Sum_probs=66.7

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeeccccc---CCCCCCCcCchH
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL---DDPGRTEWEGFP  119 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~---~~~~~~~~e~~~  119 (399)
                      ..++|+|++|++++.....+|+|+||||++|++..+.+. .++.++||++|++|+|||||+|.|.   ..++...     
T Consensus         8 ~~llikna~i~~~~~~~~~dI~I~~g~I~~I~~~~~~~~-~~~~~vID~~G~~v~PG~ID~H~h~~~~~~p~~~~-----   81 (105)
T d1onwa1           8 GFTLLQGAHLYAPEDRGICDVLVANGKIIAVASNIPSDI-VPNCTVVDLSGQILCPEILPGNDADLLVMTPELRI-----   81 (105)
T ss_dssp             CCEEEESCEEESSSEEEECEEEEETTEEEEEETTCCTTS-SSSCEEEECTTCEEEESCCTTSBCCEEEECTTCCE-----
T ss_pred             CCEEEECcEEEcCCCCeeeeEEEECCEEEEeccCccccc-CCCCeEEcCCCCEEeCCEeecccCcceecCCCcch-----
Confidence            478999999999987778999999999999998754332 2467899999999999999999764   3333322     


Q ss_pred             HHHHHHHcCCeeeeecC
Q 015826          120 SGTKAAAAGGITTLIDM  136 (399)
Q Consensus       120 ~~~~~al~~GvTtv~d~  136 (399)
                         ++.+..|+|++.+.
T Consensus        82 ---~~~~~~G~~~v~~~   95 (105)
T d1onwa1          82 ---EQVYARGKLMVKDG   95 (105)
T ss_dssp             ---EEEEETTEEEEETT
T ss_pred             ---HHHhhcceEEeccC
Confidence               23457899988765

>d2p9ba1 b.92.1.10 (A:9-70,A:395-450) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Uncharacterized protein BL1453
species: Bifidobacterium longum [TaxId: 216816]

Probab=99.57  E-value=3.2e-15  Score=115.64  Aligned_cols=69  Identities=13%  Similarity=0.090  Sum_probs=55.9

Q ss_pred             ccEEEEccEEEcCCC----ceeeEEEEE-CCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           43 NQYWLTSKRIVTPKG----VISGAVEIK-EGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        43 ~~~li~n~~vv~~~~----~~~~~V~I~-dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      ..++|+|++|+++++    ..+++|+|+ ||||.+||+..+... +.+.++||++|++|||||||+|+|+...+.
T Consensus         4 ~p~ai~na~iit~d~~~~v~~~~~ilI~~dG~I~~vg~~~~~~~-~~~~~viD~~Gk~v~PGlid~H~Hl~~~g~   77 (118)
T d2p9ba1           4 EPFALAHATIVTGDKAGTILRNMTIVVGADGRIEQVAPSIETSI-PAEYHYLDGTGKIVMLEVGKSADLLVLNAN   77 (118)
T ss_dssp             CCEEEEEEEEECCCTTCCEEEEEEEEECTTSBEEEEEEGGGCCC-CTTCEEEECTTCEEECCTTSBCCEEEESSC
T ss_pred             ccEEEEeeEEEeCCCCCceeeeEEEEEecCCeEEEEcccccccc-cceeEEEeccCcEEEeeecceeEEEEecCC
Confidence            468999999998765    248999995 799999997644321 246789999999999999999999976553

>d1yrra1 b.92.1.5 (A:1-53,A:351-382) N-acetylglucosamine-6-phosphate deacetylase, NagA {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: N-acetylglucosamine-6-phosphate deacetylase, NagA
domain: N-acetylglucosamine-6-phosphate deacetylase, NagA
species: Escherichia coli [TaxId: 562]

Probab=99.57  E-value=1.5e-15  Score=111.03  Aligned_cols=63  Identities=25%  Similarity=0.265  Sum_probs=54.3

Q ss_pred             EEEEccEEEcCCCce-eeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccCCC
Q 015826           45 YWLTSKRIVTPKGVI-SGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLDDP  110 (399)
Q Consensus        45 ~li~n~~vv~~~~~~-~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~~~  110 (399)
                      ..|+|++|+|+++.. +++|+|+||||.+|++..+.+   ++.++||++|++|+|||||.|+|....
T Consensus         2 ~al~n~rI~dg~~~~~~~~i~i~~g~I~~Ig~~~~~p---~~~~viDl~G~~l~PGlid~hvH~~~~   65 (85)
T d1yrra1           2 YALTQGRIFTGHEFLDDHAVVIADGLIKSVCPVAELP---PEIEQRSLNGAILSPTLAAGKVANLTA   65 (85)
T ss_dssp             EEEESSEEECSSCEESSEEEEEETTEEEEEEEGGGSC---TTCCEEECTTCEEEESCCTTSBCCEEE
T ss_pred             eEEEeeEEECCCCcEeccEEEEeccEEEEEccccccc---ceeEEEecCCcEEEcccEecceeeccc
Confidence            468999999998854 789999999999999876554   467899999999999999999997544

>d2fvka1 b.92.1.3 (A:2-56,A:441-541) Dihydropyrimidine amidohydrolase Pyd2 {Yeast (Saccharomyces kluyveri) [TaxId: 4934]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Yeast (Saccharomyces kluyveri) [TaxId: 4934]

Probab=99.51  E-value=4.8e-15  Score=122.19  Aligned_cols=68  Identities=21%  Similarity=0.332  Sum_probs=59.7

Q ss_pred             CCccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEE---ecceeecccccCCCC
Q 015826           41 PYNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVI---MPGLIDVHAHLDDPG  111 (399)
Q Consensus        41 ~~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~v---lPGlID~H~H~~~~~  111 (399)
                      ||.+++|+|++|+++++...++|+|+||||++|++.....   .+.++||++|++|   +|||||+|+|+..+.
T Consensus         1 pm~dllikn~~v~~~~~~~~~di~i~~g~I~~ig~~~~~~---~~~~viDa~G~~V~p~~pg~~d~Hih~~~~~   71 (156)
T d2fvka1           1 PIYDLIIKNGIICTASDIYAAEIAVNNGKVQLIAASIDPS---LGSEVIDAEGAFITPILPGVSDADLVIWYPD   71 (156)
T ss_dssp             CCEEEEEESCEEECSSCEEECEEEEETTEEEEEESCCCGG---GEEEEEECTTCEEEECCTTTSBCCEEEECCS
T ss_pred             CCccEEEECCEEECCCCCEEEEEEEECCEEEEecCCCCCC---CCCEEEECCCCEEeeecccccccceEEEeec
Confidence            7899999999999998888899999999999999865432   3568999999998   699999999997663

>d1nfga1 b.92.1.3 (A:1-51,A:382-457) D-hydantoinase {Burkholderia pickettii [TaxId: 329]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: D-hydantoinase
species: Burkholderia pickettii [TaxId: 329]

Probab=99.51  E-value=9.8e-15  Score=114.96  Aligned_cols=61  Identities=20%  Similarity=0.296  Sum_probs=55.0

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccC
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD  108 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~  108 (399)
                      +|++|+|++|+++++...++|+|+||||++|++...     ++.++||++|++|+||+||.|+|+.
T Consensus         1 mDllikn~~v~~~~~~~~~di~I~dg~I~~ig~~~~-----~~~~~iDa~G~~v~Pg~i~~~~~~~   61 (127)
T d1nfga1           1 MDIIIKNGTIVTADGISRADLGIKDGKITQIGGALG-----PAERTIDAAGRYVFPIAVGSDADIV   61 (127)
T ss_dssp             CCEEEEEEEEEETTEEEEEEEEEETTEEEEESSCCC-----CCSEEEECTTCEEEECSTTSBCCEE
T ss_pred             CcEEEECCEEECCCCCEEEEEEEECCEEEEeeCCCC-----CceEEEEeeceEEeeecccccccce
Confidence            589999999999988888999999999999998642     3678999999999999999999984

>d1m7ja3 c.1.9.11 (A:62-419) N-acyl-D-aminoacid amidohydrolase, catalytic domain {Alcaligenes faecalis [TaxId: 511]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: D-aminoacylase, catalytic domain
domain: N-acyl-D-aminoacid amidohydrolase, catalytic domain
species: Alcaligenes faecalis [TaxId: 511]

Probab=99.47  E-value=1.6e-13  Score=128.33  Aligned_cols=186  Identities=17%  Similarity=0.177  Sum_probs=122.4

Q ss_pred             ceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCC------------------CCCcHHHHHHHHHHHhc-
Q 015826           99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDP------------------STISTETLKLKVDAAEK-  159 (399)
Q Consensus        99 GlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~------------------~~~~~~~~~~~~~~~~~-  159 (399)
                      ||||+|+|.+...+.+     ......+.+||||++...|+...                  ...+++.+.++++.... 
T Consensus         1 GFID~HtH~D~~~~~~-----p~~~~~~~~GVTT~v~GncG~s~aP~~~~~~~~~~~~l~~g~~~~w~t~~eyl~~le~~   75 (358)
T d1m7ja3           1 GFIDSHTHDDNYLLKH-----RDMTPKISQGVTTVVTGNCGISLAPLAHANPPAPLDLLDEGGSFRFARFSDYLEALRAA   75 (358)
T ss_dssp             CEEESSCCCTTHHHHC-----TTCHHHHTTTEEEEEESCTTCCSCSEECSSCCTTGGGGCSSSCCEESSHHHHHHHHHHS
T ss_pred             CceecCCCCchhhccC-----CCCcccccCCCceEEEeCCCCCcccCCcccccchHHHhccCCCcCcCCHHHHHHHHHhc
Confidence            8999999987421100     01245679999999877654321                  11233455666666543 


Q ss_pred             cCceeEEeeeeee------------CCChhhHH----HHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhc
Q 015826          160 RIYVDVGFWGGLV------------PENAYNAS----ALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARY  223 (399)
Q Consensus       160 ~~~~~~~~~~~~~------------~~~~~~~~----~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~  223 (399)
                      ...+|++...+..            ..+++.++    .+++.+++|+.||+....+..   ..+.+.+|+.++++.++++
T Consensus        76 ~~~~Nva~~vgH~~lR~~vmg~~~~~at~~ei~~M~~ll~eal~~GA~G~Stgl~y~P---~~~A~~~El~~lak~~~~~  152 (358)
T d1m7ja3          76 PPAVNAACMVGHSTLRAAVMPDLRREATADEIQAMQALADDALASGAIGISTGAFYPP---AAHASTEEIIEVCRPLITH  152 (358)
T ss_dssp             CCSSEEEEEEEHHHHHHHHCSCCSSCCCHHHHHHHHHHHHHHHHHTCCEEEEETTSGG---GTTCCHHHHHHHHTHHHHH
T ss_pred             CCccceeeecccccccccccCcccccCCHHHHHHHHHHHHHHHhcCCcccccCCcccc---cccCCHHHHHHHHHHHHhc
Confidence            3446776544310            11223344    444556789999988665431   1246889999999999999


Q ss_pred             CCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh-----
Q 015826          224 KRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA-----  298 (399)
Q Consensus       224 g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~-----  298 (399)
                      |.++..|.++...                           ....++.+++++++++       |+++||+|+...     
T Consensus       153 g~~~~~h~r~~~~---------------------------~~~~~~~e~~~~a~~~-------g~~~~ish~~~~~~~~~  198 (358)
T d1m7ja3         153 GGVYATHMRDEGE---------------------------HIVQALEETFRIGREL-------DVPVVISHHKVMGKLNF  198 (358)
T ss_dssp             TCEEEEECSCSST---------------------------THHHHHHHHHHHHHHH-------TSCEEECSCCCCSGGGT
T ss_pred             CCeeeeeeccccc---------------------------cHHHHHHHHHHHHHHc-------CCceEecccccCCCcch
Confidence            9999999976432                           0134688999999987       999999998531     


Q ss_pred             ---hHHHHHHHHHHHCCCCEEEEcccccccccc
Q 015826          299 ---SSSLDLLMEAKTNGDSITVETCPHYLAFSA  328 (399)
Q Consensus       299 ---~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~  328 (399)
                         .+.++++++++ +|.+|+++++| |...++
T Consensus       199 ~~~~~~~~~~~~a~-~G~~i~~d~yP-y~ag~t  229 (358)
T d1m7ja3         199 GRSKETLALIEAAM-ASQDVSLDAYP-YVAGST  229 (358)
T ss_dssp             TTHHHHHHHHHHHH-HHSCEEEEECS-CSCEEE
T ss_pred             hhHHHHHHHHHHHh-cCCCcceeecC-cccccc
Confidence               24456666665 58899999999 555444

>d1ynya1 b.92.1.3 (A:2-52,A:385-460) D-hydantoinase {Bacillus sp. AR9 [TaxId: 301298]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: D-hydantoinase
species: Bacillus sp. AR9 [TaxId: 301298]

Probab=99.47  E-value=3.2e-14  Score=112.36  Aligned_cols=61  Identities=15%  Similarity=0.269  Sum_probs=53.0

Q ss_pred             cEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccC
Q 015826           44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD  108 (399)
Q Consensus        44 ~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~  108 (399)
                      .++|+||+|+++++...+||+|+||||++|++..+.    ++.++||++|++|+||+||.|+|+.
T Consensus         1 k~likn~~i~~~~~~~~~di~I~~g~I~~ig~~~~~----~~~~viDa~g~~v~Pg~i~~~~~~~   61 (127)
T d1ynya1           1 KKWIRGGTVVTAADTYQADVLIEGERVVAIGHQLSV----NGAEEIDATGCYVIPIAVGSDADIV   61 (127)
T ss_dssp             CEEEESCEEECSSCEEECEEEEETTEEEEEECC--------CCEEEECTTSEEEECSTTSBCCEE
T ss_pred             CEEEECcEEECCCCCEEEeEEEECCEEEEecCCCCC----CCCEEEEhhhceeecccccccchhh
Confidence            368999999999888899999999999999987643    3678999999999999999999984

>d1k1da1 b.92.1.3 (A:1-52,A:385-460) D-hydantoinase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: D-hydantoinase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.45  E-value=4.2e-14  Score=111.68  Aligned_cols=62  Identities=23%  Similarity=0.262  Sum_probs=54.5

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccC
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD  108 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~  108 (399)
                      |.++|+|++|+++++..++||+|+||||++|++..+.    ++.++||++|++|+||+||.|+|+.
T Consensus         1 M~~likn~~v~~~~~~~~~Di~I~~g~I~~Ig~~~~~----~~~~vida~g~~v~P~~v~~~~~~~   62 (128)
T d1k1da1           1 MTKIIKNGTIVTATDTYEAHLLIKDGKIAMIGQNLEE----KGAEVIDAKGCYVFPIVVGSDADLV   62 (128)
T ss_dssp             CCEEEEEEEEECSSCEEEEEEEECSSBEEEEESSCCC----SSCCCEECTTCEEEECSTTSBCCEE
T ss_pred             CCEEEECcEEECCCCCEEeeEEEECCEEEEEcCCCCC----CceEEeeeCCCeEeeeecccccceE
Confidence            5789999999999988899999999999999987643    3678999999999999997777764

>d2r8ca1 b.92.1.9 (A:2-57,A:369-414) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Zn-dependent arginine carboxypeptidase-like
domain: Uncharacterized protein EAJ56179
species: Unidentified organism [TaxId: 32644]

Probab=99.44  E-value=8.2e-14  Score=105.84  Aligned_cols=60  Identities=15%  Similarity=0.258  Sum_probs=50.6

Q ss_pred             cEEEEccEEEcCCC--c-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccc
Q 015826           44 QYWLTSKRIVTPKG--V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAH  106 (399)
Q Consensus        44 ~~li~n~~vv~~~~--~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H  106 (399)
                      +++|+|++|+|+.+  . .+.+|+|+||+|++|++....+   ++.++||++|++|||||||.|.|
T Consensus         2 ~~l~~n~~v~d~~~~~~~~~~~I~I~~g~I~~i~~~~~~~---~~~~vID~~G~~v~PGlid~h~~   64 (102)
T d2r8ca1           2 TFLFRNGALLDPDHPDLLQGFEILIEDGFIREVSDKPIKS---SNAHVIDVKGKTIMPRIVPGAHA   64 (102)
T ss_dssp             EEEEEEEEECCTTSSSCEEEEEEEEESSBEEEEESSCCCC---SSCEEEECTTCEEEESCCTTSBC
T ss_pred             eEEEECeEEECCCCCCcccCcEEEEECCEEEEccccCCCC---CCCEEEeCCCCEEECceeeheee
Confidence            58999999999865  2 3679999999999999764432   46799999999999999988764

>d1gkra1 b.92.1.3 (A:1-54,A:380-451) L-hydantoinase {Arthrobacter aurescens [TaxId: 43663]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: L-hydantoinase
species: Arthrobacter aurescens [TaxId: 43663]

Probab=99.41  E-value=7.8e-14  Score=109.74  Aligned_cols=67  Identities=19%  Similarity=0.360  Sum_probs=58.6

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecce---eecccccCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGL---IDVHAHLDDPG  111 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGl---ID~H~H~~~~~  111 (399)
                      |.+++|+||+|+++++...+||+|+||||++|++.....   ++.++||++|++|+||+   .|+|.|+..+.
T Consensus         1 M~dllIkn~~iv~~~~~~~~Di~I~dgkI~~i~~~~~~~---~a~~~iDa~g~~v~P~~~vG~DAD~~l~Dp~   70 (126)
T d1gkra1           1 MFDVIVKNCRLVSSDGITEADILVKDGKVAAISADTSDV---EASRTIDAGGKFVMPTLQVGSDADLLILDLD   70 (126)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEEEETTEEEEEESCCTTC---CEEEEEECTTCEEEESCCTTSBCCEEEEESC
T ss_pred             CccEEEECcEEECCCCCEEEeEEEECCEEEEEcCcCCcc---cceEEeehhhcccccceeecccchhheeccc
Confidence            679999999999998888999999999999999865432   35689999999999998   99999987653

>d2qs8a1 b.92.1.9 (A:7-63,A:374-412) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Zn-dependent arginine carboxypeptidase-like
domain: Xaa-Pro dipeptidase
species: Alteromonas macleodii [TaxId: 28108]

Probab=99.37  E-value=2.8e-13  Score=101.12  Aligned_cols=62  Identities=11%  Similarity=0.104  Sum_probs=52.2

Q ss_pred             cEEEEccEEEcCCC--c-eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeeccccc
Q 015826           44 QYWLTSKRIVTPKG--V-ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL  107 (399)
Q Consensus        44 ~~li~n~~vv~~~~--~-~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~  107 (399)
                      +++|+||+|+|+.+  . .+++|+|+||+|++|++....+  .++.++||++|++|||||+|.|+|.
T Consensus         2 ktlI~~g~liDg~~~~~~~~~~I~I~~~~I~~V~~~~~~~--~~~~~vID~~G~~v~PGL~~g~~~d   66 (96)
T d2qs8a1           2 KTLIHAGKLIDGKSDQVQSRISIVIDGNIISDIKKGFISS--NDFEDYIDLRDHTVLPSIESGKLAD   66 (96)
T ss_dssp             CEEEEEEEECCSSCSSCEEEEEEEEETTEEEEEEESCCCC--TTSSEEEEEEEEEEEESCCTTSBCC
T ss_pred             eEEEECeEEEECCCCccccCceEEEECCEEEEEcccccCC--CCCCEEEECCCCEeccCccccCccc
Confidence            67999999999865  2 4789999999999998754322  2467899999999999999999994

>d1gkpa1 b.92.1.3 (A:2-54,A:390-459) D-hydantoinase {Thermus sp. [TaxId: 275]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: D-hydantoinase
species: Thermus sp. [TaxId: 275]

Probab=99.33  E-value=5.5e-13  Score=104.05  Aligned_cols=61  Identities=16%  Similarity=0.177  Sum_probs=52.7

Q ss_pred             EEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeecccccC
Q 015826           45 YWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHLD  108 (399)
Q Consensus        45 ~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~~  108 (399)
                      ++|+||+|+++++..++||+|+||||++|++....+   ++.++|||+|++|+||..++|.|..
T Consensus         2 llIkng~iv~~~~~~~~Di~I~~gkI~~Ig~~l~~~---~~~~viDa~G~~v~~g~d~~~~d~~   62 (123)
T d1gkpa1           2 LLIKNGEIITADSRYKADIYAEGETITRIGQNLEAP---PGTEVIDATGKYVFPGADLVVYDPQ   62 (123)
T ss_dssp             EEEESCEEEETTEEEECEEEESSSBCCEEESCCCCC---TTCEEEECTTSEEEECCCEEEEETT
T ss_pred             EEEECcEEECCCCCEEeeEEEECCEEEEeecCCCCC---cchhhhhhccceEecCcceEEEecc
Confidence            789999999998888999999999999999876543   3678999999999999976666654

>d1m7ja1 b.92.1.6 (A:7-61) N-acyl-D-aminoacid amidohydrolase {Alcaligenes faecalis [TaxId: 511]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: D-aminoacylase
domain: N-acyl-D-aminoacid amidohydrolase
species: Alcaligenes faecalis [TaxId: 511]

Probab=99.27  E-value=5.5e-12  Score=83.71  Aligned_cols=52  Identities=13%  Similarity=0.196  Sum_probs=45.2

Q ss_pred             ccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEec
Q 015826           43 NQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMP   98 (399)
Q Consensus        43 ~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlP   98 (399)
                      +|++|+||+|+|+.+  ...++|+|+||||++|++....    ++.++||++|++|+|
T Consensus         2 ~DllIkn~~i~d~~~~~~~~~di~I~~g~I~~Ig~~~~~----~~~~vIDa~G~~v~P   55 (55)
T d1m7ja1           2 FDYILSGGTVIDGTNAPGRLADVGVRGDRIAAVGDLSAS----SARRRIDVAGKVVSP   55 (55)
T ss_dssp             BSEEEESSEECCSSSCCCEECEEEEETTEEEEEECCTTS----CBSCEEECTTCEEEE
T ss_pred             CcEEEECCEEECCCCCceeEEEEEEECCEEEEEccCCCC----CCCEEEECCCCEECC
Confidence            689999999999876  3689999999999999975433    367899999999998

>d1onwa2 c.1.9.13 (A:63-346) Isoaspartyl dipeptidase, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Isoaspartyl dipeptidase, catalytic domain
domain: Isoaspartyl dipeptidase, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=99.22  E-value=5.3e-11  Score=105.92  Aligned_cols=66  Identities=21%  Similarity=0.243  Sum_probs=46.7

Q ss_pred             ceeecccccCCCCCC---CcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeE
Q 015826           99 GLIDVHAHLDDPGRT---EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDV  165 (399)
Q Consensus        99 GlID~H~H~~~~~~~---~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (399)
                      ||||+|+|+..++..   ..++....++.++++||||++|++ ++.+.....+.+....+.........+
T Consensus         1 GlID~HvHl~~~~~~~~~~~~~~~~~~~~~l~~GvTTv~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~   69 (284)
T d1onwa2           1 GFIDQHVHLIGGGGEAGPTTRTPEVALSRLTEAGVTSVVGLL-GTDSISRHPESLLAKTRALNEEGISAW   69 (284)
T ss_dssp             CEEEEEECTTCCBCTTSGGGBCCCCCHHHHHHTTEEEEEECC-CSCCSSCCHHHHHHHHHHHHHHTSEEE
T ss_pred             CEEEeccCCCCCCCCcccchhhHHHHHHHHHhCCeEEEecCC-CCCChHhHHHHHHHHHHHHhhcCeeEE
Confidence            899999999876432   234444567889999999999998 666666667777666665554443343

>d1kcxa1 b.92.1.3 (A:15-66,A:401-490) Dihydropyrimidinase related protein-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: Dihydropyrimidinase related protein-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.19  E-value=1.1e-11  Score=98.86  Aligned_cols=64  Identities=16%  Similarity=0.222  Sum_probs=56.7

Q ss_pred             cEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecce-eecccccCCC
Q 015826           44 QYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGL-IDVHAHLDDP  110 (399)
Q Consensus        44 ~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGl-ID~H~H~~~~  110 (399)
                      +++|+||+|++++....+||+|+||+|++|++....+   .++++||+.|++|+||. .|+|.|+..+
T Consensus         2 k~lIkng~iv~~~~~~~~DilIedG~I~~Ig~~l~~~---~~a~vIDa~G~~v~~~~G~dAdl~i~Dp   66 (142)
T d1kcxa1           2 RLLIRGGRIINDDQSFYADVYLEDGLIKQIGENLIVP---GGVKTIEANGRMVIIAVGSDADVVIWDP   66 (142)
T ss_dssp             CEEEESCEEECSSCEEECEEEEETTEEEEEESSCCSC---SSCEEEECTTCEEECCTTSBCCEEEEEE
T ss_pred             cEEEECCEEECCCCcEEeeEEEECCEEeEEeccCCCC---ccceeechhhcceeecccccceEEEEec
Confidence            6899999999998888899999999999999765443   36799999999999997 9999999765

>d2i9ua2 c.1.9.9 (A:67-376) Guanine deaminase {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Guanine deaminase
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=99.12  E-value=1.9e-10  Score=105.02  Aligned_cols=42  Identities=17%  Similarity=0.182  Sum_probs=31.1

Q ss_pred             EEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEec-CChhh
Q 015826          192 GLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHA-EMEKG  236 (399)
Q Consensus       192 ~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~-~~~~~  236 (399)
                      .+...+.+..   ...++++.++.+.+.++++|+++++|+ |+.++
T Consensus       128 ~i~~~~~~~~---~~~~~~e~~~~~~~~a~~~~~~~~~H~~E~~~e  170 (310)
T d2i9ua2         128 IVKPIITPRF---VPSCSNELMDGLGKLSYKYRLPVQSHLSENLDE  170 (310)
T ss_dssp             SEEECBEECC---GGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHH
T ss_pred             ccceeecccC---CCccCHHHHHHHHHHhhccccceeehhccchHH
Confidence            3455444432   235789999999999999999999996 55544

>d2ftwa1 b.92.1.3 (A:7-59,A:394-490) Dihydropyrimidine amidohydrolase Pyd2 {Dictyostelium discoideum [TaxId: 44689]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: Dihydropyrimidine amidohydrolase Pyd2
species: Dictyostelium discoideum [TaxId: 44689]

Probab=99.04  E-value=1.5e-10  Score=92.92  Aligned_cols=65  Identities=17%  Similarity=0.173  Sum_probs=55.7

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecc-eeecccccCCC
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPG-LIDVHAHLDDP  110 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPG-lID~H~H~~~~  110 (399)
                      ..++|+||+|++.+....+||+|+||+|.+|+.....+   .++++||+.|++++++ ..|+|+|+..+
T Consensus         2 ~~iLIkng~iv~~~~~~~~DIlI~~G~I~~I~~~i~~~---~~~~iida~gk~v~i~~G~dad~~i~dp   67 (150)
T d2ftwa1           2 GTILIKNGTVVNDDRYFKSDVLVENGIIKEISKNIEPK---EGIKVVDATDKLLLIDVGCDGDIVIWDP   67 (150)
T ss_dssp             CCEEEESCEEECSSCEEECEEEEETTEEEEEESCCCCC---SSCCEEECTTCEEECSTTSBCCEEEEEE
T ss_pred             CCEEEECCEEECCCCcEEeeEEEECCEEEEEeccCCCC---CccEEEecccceeeeecCccCceEEEec
Confidence            36899999999988888999999999999999876543   3678999999988655 69999999765

>d2uz9a2 c.1.9.9 (A:76-388) Guanine deaminase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Guanine deaminase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.94  E-value=1.2e-08  Score=92.74  Aligned_cols=43  Identities=9%  Similarity=-0.025  Sum_probs=32.3

Q ss_pred             cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          188 AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       188 ~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .+...++....+..   ....+++.++++.+.|+++|+++.+|+..
T Consensus       126 ~~~~~v~~~~~~~~---~~~~~~e~l~~~~~~a~~~g~~~~~H~~e  168 (313)
T d2uz9a2         126 KNYSRVKPIVTPRF---SLSCSETLMGELGNIAKTRDLHIQSHISE  168 (313)
T ss_dssp             HTCSSEEEEEEECC---GGGCCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred             ccccceeEEEeccc---cccccHHHHHHHHHHhhccccceeeehhc
Confidence            45555665554432   24578999999999999999999999743

>d4ubpc1 b.92.1.1 (C:1-131,C:435-483) alpha-Subunit of urease {Bacillus pasteurii [TaxId: 1474]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: alpha-Subunit of urease
domain: alpha-Subunit of urease
species: Bacillus pasteurii [TaxId: 1474]

Probab=98.91  E-value=2.5e-09  Score=85.23  Aligned_cols=85  Identities=14%  Similarity=0.180  Sum_probs=67.5

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCC---------CCCCcEEeCCCCEEecceeecccccCCCCC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRN---------SKTGQVVDYGEAVIMPGLIDVHAHLDDPGR  112 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~---------~~~~~vID~~G~~vlPGlID~H~H~~~~~~  112 (399)
                      ..+++|.|+.|+|..++..+||.|+||||+.||+...+...         ..+.++|.++|+++.+|-||.|.|+...  
T Consensus        66 ~~d~vitn~~i~d~~Gi~KadiGikdG~I~giGkaGNPd~mdgV~~~~vig~~Teviageg~I~TagvIdthvHFp~q--  143 (180)
T d4ubpc1          66 VLDLLLTNALILDYTGIYKADIGVKDGYIVGIGKGGNPDIMDGVTPNMIVGTATEVIAAEGKIVTALVLWEPKFFGVK--  143 (180)
T ss_dssp             BCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTCTTCCTTCBCCTTCEEEECTTCEEEEEEEECGGGTTTS--
T ss_pred             cceEEEeeEEEecCCCeEEeeeeeecCEEEEeeccCCccccCCCCCCeEEcCCceEEecCCceEEEEEEeehhhcCCC--
Confidence            46899999999998889999999999999999975432100         1367899999999999999999998432  


Q ss_pred             CCcCchHHHHHHHHcCCeeeeecCc
Q 015826          113 TEWEGFPSGTKAAAAGGITTLIDMP  137 (399)
Q Consensus       113 ~~~e~~~~~~~~al~~GvTtv~d~~  137 (399)
                               ...++++|+|+..-+.
T Consensus       144 ---------pe~aLksG~tt~Gp~g  159 (180)
T d4ubpc1         144 ---------ADRVIKGGIIAYAQIG  159 (180)
T ss_dssp             ---------CSEEEETTEEEEEEEC
T ss_pred             ---------HHHHHhcCceeEccCC
Confidence                     1345788999986554

>d1p1ma2 c.1.9.9 (A:50-330) Hypothetical protein TM0936, probable catalytic domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Hypothetical protein TM0936, probable catalytic domain
species: Thermotoga maritima [TaxId: 2336]

Probab=98.84  E-value=1.4e-08  Score=91.09  Aligned_cols=101  Identities=16%  Similarity=0.137  Sum_probs=53.6

Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCCChhhHHHHHHHHH--cCCc-EEEEee
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPENAYNASALEALLN--AGVL-GLKSFM  197 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~--~G~~-~ik~~~  197 (399)
                      +..+++++||||+.|+..       ..+.+....+....+..+...... .........++..++++  .+.. .+...+
T Consensus        50 ~~~e~l~~G~Ttv~d~~~-------~~~~~~~a~~~~g~r~~~~~~~~~-~~~~~~~~~~e~~~~~~~~~~~~~~i~~~~  121 (281)
T d1p1ma2          50 AQMEMARHGIAGFVDMYF-------HEEWIAKAVRDFGMRALLTRGLVD-SNGDDGGRLEENLKLYNEWNGFEGRIFVGF  121 (281)
T ss_dssp             HHHHHHTTTEEEEEEEES-------SHHHHHHHHHHHCCEEEEEEEECC-BTTBCTTHHHHHHHHHHHHTTGGGTEEEEE
T ss_pred             HHHHHhhCCeEEEeeecc-------CcHHHHHHHHHhCCceEEeeeeee-cCccccccHHHHHHHHHHhcCccCceEEEE
Confidence            355679999999999862       123333333332222222111110 11111122333333322  1211 233333


Q ss_pred             cCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015826          198 CPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE  232 (399)
Q Consensus       198 ~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~  232 (399)
                      .+..   ...++++.++.+.+.|+++|+++++|+.
T Consensus       122 ~~~~---~~~~~~~~~~~~~~~A~~~~~~i~iH~~  153 (281)
T d1p1ma2         122 GPHS---PYLCSEEYLKRVFDTAKSLNAPVTIHLY  153 (281)
T ss_dssp             EECC---TTTSCHHHHHHHHHHHHHTTCCEEEEES
T ss_pred             eccc---chhhhhhhhHHHHHHHhccCcccccccc
Confidence            3332   2367999999999999999999999963

>d1xrta1 b.92.1.3 (A:1-55,A:366-422) Two-domain dihydroorotase {Aquifex aeolicus [TaxId: 63363]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Hydantoinase (dihydropyrimidinase)
domain: Two-domain dihydroorotase
species: Aquifex aeolicus [TaxId: 63363]

Probab=98.72  E-value=8.3e-09  Score=78.67  Aligned_cols=55  Identities=13%  Similarity=0.171  Sum_probs=47.2

Q ss_pred             CccEEEEccEEEcCCCc--eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecce
Q 015826           42 YNQYWLTSKRIVTPKGV--ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGL  100 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~--~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGl  100 (399)
                      |++++|+||+|+|+...  ...+|+|++|+|++|++....    +++++||+.|++++||+
T Consensus         1 m~~~likng~viDp~~g~~~~~DllI~~GkI~~I~~~i~~----~~a~viD~~g~~~~~~l   57 (112)
T d1xrta1           1 MLKLIVKNGYVIDPSQNLEGEFDILVENGKIKKIDKNILV----PEAEIIDAKGLIVCPTL   57 (112)
T ss_dssp             CCEEEEESCEEEEGGGTEEEECEEEEETTEEEEEESSCCC----SSEEEEECTTSEEEECC
T ss_pred             CceeEEeCeEEECCCCCccceeeEEEECCEEEEeecCCCc----ccceEEehhccccccee
Confidence            67899999999998764  368999999999999976543    25689999999999997

>d2paja2 c.1.9.9 (A:70-405) Hypothetical protein GOS_1943094 {Environmental samples}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Hypothetical protein GOS 1943094
species: Environmental samples

Probab=98.67  E-value=1.5e-07  Score=85.74  Aligned_cols=28  Identities=14%  Similarity=0.144  Sum_probs=24.0

Q ss_pred             CCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          207 MTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       207 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      .+++++++...+.+++.+.++++|+...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~  183 (336)
T d2paja2         156 SISPREMRETAAVARRLGLRMHSHLSET  183 (336)
T ss_dssp             SSCHHHHHHHHHHHHHTTCEEEEECC--
T ss_pred             ccCHHHHHHHHhhhhccCCceeeecccc
Confidence            4689999999999999999999998543

>d1e9yb1 b.92.1.1 (B:1-131,B:432-480) alpha-Subunit of urease {Helicobacter pylori [TaxId: 210]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: alpha-Subunit of urease
domain: alpha-Subunit of urease
species: Helicobacter pylori [TaxId: 210]

Probab=98.65  E-value=5.9e-08  Score=77.20  Aligned_cols=70  Identities=16%  Similarity=0.155  Sum_probs=57.9

Q ss_pred             CccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCC---------CCCCcEEeCCCCEEecce----eecccccC
Q 015826           42 YNQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRN---------SKTGQVVDYGEAVIMPGL----IDVHAHLD  108 (399)
Q Consensus        42 ~~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~---------~~~~~vID~~G~~vlPGl----ID~H~H~~  108 (399)
                      ..|++|.|+.|+|..+++++||.|+||||+.||+...+...         ....++|.++|+++.||-    ||.|.|.-
T Consensus        65 ~~D~vitna~iid~~Gi~kadiGikdG~I~~iGkaGnPd~mdgv~~~~iig~~Tevi~geg~I~TaGADlVlwd~h~hgI  144 (180)
T d1e9yb1          65 ELDLIITNALIVDYTGIYKADIGIKDGKIAGIGKGGNKDMQDGVKNNLSVGPATEALAGEGLIVTAGADLVLWSPAFFGV  144 (180)
T ss_dssp             CCSEEEEEEEEEETTEEEEEEEEEETTEEEEEECCBCTTTSSSCCGGGBCCTTCEEEECTTCEEEECCCEEEECTTTTTT
T ss_pred             ccceEEEeeEEeccCCeEEeeeeeeCCEEEEeeccCCccccCCCCCCeEECCCceEEecCCceEecCcceEEEchhhcCC
Confidence            46999999999999889999999999999999975432100         135789999999999996    99999987


Q ss_pred             CCC
Q 015826          109 DPG  111 (399)
Q Consensus       109 ~~~  111 (399)
                      .|.
T Consensus       145 kPq  147 (180)
T d1e9yb1         145 KPN  147 (180)
T ss_dssp             CCS
T ss_pred             CHH
Confidence            663

>d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: alpha-subunit of urease, catalytic domain
domain: alpha-subunit of urease, catalytic domain
species: Bacillus pasteurii [TaxId: 1474]

Probab=98.52  E-value=4.6e-07  Score=80.16  Aligned_cols=115  Identities=23%  Similarity=0.318  Sum_probs=85.7

Q ss_pred             ceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCC--------CcHHHHHHHHHHHhccCceeEEeeee
Q 015826           99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPST--------ISTETLKLKVDAAEKRIYVDVGFWGG  170 (399)
Q Consensus        99 GlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (399)
                      |-||+|+|+-.|.         ....+|.+|+||++....  -|..        ..+-.+...++... ...+|+++.+-
T Consensus         1 GgiDtHvHfi~Pq---------q~~~al~sGiTT~~GgGt--Gpa~gt~att~tpG~~~i~~ml~a~d-~~P~N~g~~gk   68 (390)
T d4ubpc2           1 GGIDTHVHFINPD---------QVDVALANGITTLFGGGT--GPAEGSKATTVTPGPWNIEKMLKSTE-GLPINVGILGK   68 (390)
T ss_dssp             CEEEEEEECCCTT---------HHHHHHHTTEEEEEEECC--SSCHHHHHSSCCCHHHHHHHHHHHHT-TCSSEEEEEEE
T ss_pred             CCccccccccCHH---------HHHHHHhcCCeeeecCcc--CCCCCCCCcccCCCHHHHHHHHHhhh-hCCcceeeeec
Confidence            7799999997652         467899999999987752  2221        12345666666654 45678888754


Q ss_pred             eeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          171 LVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       171 ~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      -   +....+.+.+++++|+.++|+.-.       .-.++..+..++..|.++++.|.+|..+..
T Consensus        69 G---n~s~~~~l~eqi~aGa~GlKiHED-------wGatpa~id~~L~vad~~dvqv~iHtDtlN  123 (390)
T d4ubpc2          69 G---HGSSIAPIMEQIDAGAAGLKIHED-------WGATPASIDRSLTVADEADVQVAIHSDTLN  123 (390)
T ss_dssp             C---CCSSHHHHHHHHHHTCCEEEEEGG-------GCCCHHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred             c---ccCChHHHHHHHHhhhheeecccc-------cccCHHHHHHHHHHhhccCceEEEecCCcc
Confidence            2   333467899999999999999632       246889999999999999999999987654

>d2imra2 c.1.9.16 (A:91-398) Hypothetical protein DR0824 {Deinococcus radiodurans [TaxId: 1299]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: DR0824-like
domain: Hypothetical protein DR0824
species: Deinococcus radiodurans [TaxId: 1299]

Probab=98.42  E-value=1.1e-06  Score=78.69  Aligned_cols=127  Identities=13%  Similarity=0.073  Sum_probs=67.5

Q ss_pred             cceeecccccCCCCCC------------------C---cCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHH
Q 015826           98 PGLIDVHAHLDDPGRT------------------E---WEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDA  156 (399)
Q Consensus        98 PGlID~H~H~~~~~~~------------------~---~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~  156 (399)
                      |||||+|+|+....+.                  .   .+....+...++++||||+.|+..       ....+......
T Consensus         1 PGlIdaH~Hl~~s~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~l~~G~Ttv~d~~~-------~~~~~~~~~~~   73 (308)
T d2imra2           1 PPPVNAHTHLDMSAYEFQALPYFQWIPEVVIRGRHLRGVAAAQAGADTLTRLGAGGVGDIVW-------APEVMDALLAR   73 (308)
T ss_dssp             SCCCEEEEESSCCHHHHHHCHHHHTSHHHHHHHTTCCHHHHHHHHHHHHHHTTCCCEEEEEC-------SHHHHHHHHTC
T ss_pred             CCccchhhChhhhCccccCCCHHHHHHHHHhccccccHHHHHHHHHHHHHHcCCeEEEehhc-------CHHHHHHHHHH
Confidence            9999999999754210                  0   011233456789999999999862       12333332221


Q ss_pred             HhccCceeEEeeeeeeCCChhhHHHHHHH----HHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecC
Q 015826          157 AEKRIYVDVGFWGGLVPENAYNASALEAL----LNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAE  232 (399)
Q Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~l----~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~  232 (399)
                      ...+................+..+.++++    .+.....++......   ....++.+.++...+.+++.+.++..|+.
T Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~h~~  150 (308)
T d2imra2          74 EDLSGTLYFEVLNPFPDKADEVFAAARTHLERWRRLERPGLRLGLSPH---TPFTVSHRLMRLLSDYAAGEGLPLQIHVA  150 (308)
T ss_dssp             TTCCEEEEEEECBCCGGGHHHHHHHHHHHHHHHHTTCBTTEEEEEEEC---CSSSBCHHHHHHHHHHHHHHTCCBEEEES
T ss_pred             hCcCeEEEeeecCCCCCCHHHHHHHHHHHHHHHhccCCCceEEeeecc---cccccchHHHHHHhhhccccCccceeeee
Confidence            11111111111111100111122333333    223333454433332   22357889999999999999999999975


Q ss_pred             Ch
Q 015826          233 ME  234 (399)
Q Consensus       233 ~~  234 (399)
                      ..
T Consensus       151 ~~  152 (308)
T d2imra2         151 EH  152 (308)
T ss_dssp             CS
T ss_pred             cc
Confidence            43

>d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: alpha-subunit of urease, catalytic domain
domain: alpha-subunit of urease, catalytic domain
species: Helicobacter pylori [TaxId: 210]

Probab=98.40  E-value=1.6e-06  Score=76.56  Aligned_cols=113  Identities=30%  Similarity=0.400  Sum_probs=83.8

Q ss_pred             eecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCC--------CcHHHHHHHHHHHhccCceeEEeeeeee
Q 015826          101 IDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPST--------ISTETLKLKVDAAEKRIYVDVGFWGGLV  172 (399)
Q Consensus       101 ID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (399)
                      ||+|+|+-.|.         ....+|.+|+||++....  -|..        .....+...++... ...+|+++.+-- 
T Consensus         2 iDtHvHfi~Pq---------q~~~al~sGiTT~iGgGt--GPa~Gt~att~tpg~~~i~~ml~a~d-~~P~N~g~~gkG-   68 (389)
T d1e9yb2           2 IDTHIHFISPQ---------QIPTAFASGVTTMIGGGT--GPADGTNATTITPGRRNLKWMLRAAE-EYSMNLGFLAKG-   68 (389)
T ss_dssp             EEEEEETTCTT---------HHHHHHHTTEEEEEEECC--SSCHHHHHCCCCCHHHHHHHHHHHHT-TSSSEEEEEEEC-
T ss_pred             ccccccccCHH---------HHHHHHhcCCeEEecCcc--CCCCCCCccccCCChhHHHHHHHhhh-cCCcceeeeecc-
Confidence            89999997652         467899999999987752  2211        11345666666654 456798887643 


Q ss_pred             CCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          173 PENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       173 ~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                        +....+.+.+++++|+.++|+.-.       .-.++..+..++..|.++++.|.+|...-.
T Consensus        69 --n~s~~~~l~eqi~aGa~GlKiHED-------wGatp~~Id~~L~vad~~dvqv~iHtDtlN  122 (389)
T d1e9yb2          69 --NASNDASLADQIEAGAIGFKIHED-------WGTTPSAINHALDVADKYDVQVAIHTDTLN  122 (389)
T ss_dssp             --CCSCHHHHHHHHHTTCSEEEECGG-------GCCCHHHHHHHHHHHHHTTCEEEECCCTTC
T ss_pred             --CCCChHHHHHHHHhccceeecccc-------ccCCHHHHHHHHHHHHhhCceEEecCCCcc
Confidence              333457899999999999999532       246889999999999999999999987643

>d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: alpha-subunit of urease, catalytic domain
domain: alpha-subunit of urease, catalytic domain
species: Klebsiella aerogenes [TaxId: 28451]

Probab=98.38  E-value=1.3e-06  Score=77.21  Aligned_cols=113  Identities=25%  Similarity=0.318  Sum_probs=83.9

Q ss_pred             eecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCC------C--cHHHHHHHHHHHhccCceeEEeeeeee
Q 015826          101 IDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPST------I--STETLKLKVDAAEKRIYVDVGFWGGLV  172 (399)
Q Consensus       101 ID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (399)
                      ||+|+|+-.|.         ....+|.+|+||++....  -|..      .  .+..+...++... ...+|+++.+-- 
T Consensus         2 iDtHvHfi~Pq---------q~~~al~sGiTT~iGgGt--GPa~Gt~att~tpg~~~~~~ml~a~d-~~P~N~g~~gkG-   68 (385)
T d1ejxc2           2 IDTHIHWICPQ---------QAEEALVSGVTTMVGGGT--GPAAGTHATTCTPGPWYISRMLQAAD-SLPVNIGLLGKG-   68 (385)
T ss_dssp             EEEEEECSCTT---------HHHHHHHTTEEEEEEECC--SSSHHHHHSSCCCHHHHHHHHHHHHT-TSSSEEEEEEEC-
T ss_pred             ccccccccCHH---------HHHHHHhcCCeeeecCcc--CCCCCCCCcCcCCCHHHHHHHHHhhh-hCCcceeeeecc-
Confidence            89999997652         467899999999997752  2221      1  1345666666654 456788887542 


Q ss_pred             CCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          173 PENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       173 ~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                        +....+.+++++++|+.++|+.-.       .-.++..+..++..|.++++.|.+|...-.
T Consensus        69 --n~s~~~~l~eqi~AGa~GlKiHED-------wGatpa~id~~L~vad~~dvqv~iHtDtlN  122 (385)
T d1ejxc2          69 --NVSQPDALREQVAAGVIGLKIHED-------WGATPAAIDCALTVADEMDIQVALHSDTLN  122 (385)
T ss_dssp             --CCSSHHHHHHHHHHTCSEEEEEGG-------GCCCHHHHHHHHHHHHHHTCEEEEECCTTC
T ss_pred             --ccCChHHHHHHHHhhhceecCCcc-------cccChHHHHHHHHhHhhcCceEEEeccccc
Confidence              333457799999999999999632       236889999999999999999999997644

>d1bf6a_ c.1.9.3 (A:) Phosphotriesterase homology protein {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Phosphotriesterase-like
domain: Phosphotriesterase homology protein
species: Escherichia coli [TaxId: 562]

Probab=98.27  E-value=4.5e-06  Score=74.53  Aligned_cols=107  Identities=16%  Similarity=0.155  Sum_probs=64.9

Q ss_pred             HHHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCce
Q 015826          210 ASHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAH  289 (399)
Q Consensus       210 ~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~  289 (399)
                      .+.+++.++.|+++|+||.+|+++....                            .+.+..+.+..        .....
T Consensus       137 ~~~f~~~~~~A~~~~lPv~iH~r~~~~~----------------------------~e~~~~l~~~~--------~~~~~  180 (291)
T d1bf6a_         137 EKVFIAAALAHNQTGRPISTHTSFSTMG----------------------------LEQLALLQAHG--------VDLSR  180 (291)
T ss_dssp             HHHHHHHHHHHHHHCCCEEEECGGGCSH----------------------------HHHHHHHHHTT--------CCGGG
T ss_pred             HHHHHHHHHHHHHhCCCeEEeccchhhh----------------------------HHHHHHHHHhC--------CCccc
Confidence            3568889999999999999998653210                            00111111111        12345


Q ss_pred             EEEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCcc--EEeC
Q 015826          290 LHIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHID--MLSS  367 (399)
Q Consensus       290 vhi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id--~i~s  367 (399)
                      +.+.|.... .+.+.++++.+.|..+..+....               ++..|   .....+.+.+.++.+-.|  +++|
T Consensus       181 ~~~~H~~f~-~~~e~~~~~~~~G~~i~~~g~~~---------------~~~~~---~~~~~~~~~~lv~~~p~drilleT  241 (291)
T d1bf6a_         181 VTVGHCDLK-DNLDNILKMIDLGAYVQFDTIGK---------------NSYYP---DEKRIAMLHALRDRGLLNRVMLSM  241 (291)
T ss_dssp             EEECCCCSS-CCHHHHHHHHHTTCEEEECCTTC---------------TTTSC---HHHHHHHHHHHHHTTCGGGEEECC
T ss_pred             ceecccCCC-CCHHHHHHHHhcCeeEEeccccc---------------ccCCc---HHHhHHHHHHHHHhCCchhEEEec
Confidence            678897333 56788999989998776664331               00111   123345677788888777  8888


Q ss_pred             CCCCC
Q 015826          368 DHSPT  372 (399)
Q Consensus       368 dh~p~  372 (399)
                      | +|+
T Consensus       242 D-~p~  245 (291)
T d1bf6a_         242 D-ITR  245 (291)
T ss_dssp             C-CCS
T ss_pred             C-CCC
Confidence            8 444

>d2icsa2 c.1.9.14 (A:55-321) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenine deaminase-like
domain: Putative adenine deaminase EF0837
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.26  E-value=1.1e-06  Score=75.15  Aligned_cols=128  Identities=15%  Similarity=0.026  Sum_probs=65.4

Q ss_pred             ceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeC-----
Q 015826           99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVP-----  173 (399)
Q Consensus        99 GlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----  173 (399)
                      ||||+|+|+..++...+++.   .+.++++||||++|++ +..+  ..   ++...+...........+......     
T Consensus         1 GlID~H~H~~~~~~~~~~~~---~~~~l~~GvTTv~d~~-~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   71 (267)
T d2icsa2           1 GWIDDHVHCFEKMALYYDYP---DEIGVKKGVTTVIDAG-TTGA--EN---IHEFYDLAQQAKTNVFGLVNISKWGIVAQ   71 (267)
T ss_dssp             CEEEEEECCCTTSSSSCCCH---HHHTGGGTEEEEEEES-SSCT--TT---HHHHHHHHHTSSSEEEEEEESSTTTTSSS
T ss_pred             CeEEeCcCCCCCCCcchhhH---HHHHhCCeeEEEECCC-CCCh--hH---HHHHHHHHHhhhcchhhcccccccccccc
Confidence            89999999987766555543   4678999999999987 3222  22   233333333222222222111100     


Q ss_pred             ---CC--hhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCC-CHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          174 ---EN--AYNASALEALLNAGVLGLKSFMCPSGINDFPMT-NASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       174 ---~~--~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~-~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                         ..  ....+...+..+.+...++.+............ ..+........++..++.+..|+....
T Consensus        72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~  139 (267)
T d2icsa2          72 DELADLSKVQASLVKKAIQELPDFVVGIKARMSRTVIGDNGITPLELAKQIQQENQEIPLMVHIGSAP  139 (267)
T ss_dssp             CTTSSGGGCCHHHHHHHHHHCTTTEEEEEEEESHHHHTTCTTHHHHHHHHHHHTTTTCCEEEEECSSS
T ss_pred             cccCChhhcCHHHHHHHHhhhhhhhhhhhhhhcccccccCCcHHHHHHHHHHHHhcccceeeecccch
Confidence               00  112445555555554444332211100000122 333444445556668899999986544

>d2bb0a2 c.1.9.17 (A:74-373) Imidazolonepropionase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Imidazolonepropionase
species: Bacillus subtilis [TaxId: 1423]

Probab=98.12  E-value=2.9e-05  Score=68.10  Aligned_cols=29  Identities=21%  Similarity=0.101  Sum_probs=24.9

Q ss_pred             CCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          207 MTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       207 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      ..+.+.+..+.+.+++.++++..|+...+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~h~~~~~  181 (300)
T d2bb0a2         153 VFTVSQSRRYLQKAAEAGFGLKIHADEID  181 (300)
T ss_dssp             SBCHHHHHHHHHHHHHTTCEEEEEECSSS
T ss_pred             cCCHHHHHHHHHHHHhhhhcccccccchh
Confidence            46888999999999999999999986543

>d2puza2 c.1.9.17 (A:80-380) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Imidazolonepropionase
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.06  E-value=9.6e-05  Score=64.41  Aligned_cols=29  Identities=17%  Similarity=0.184  Sum_probs=25.0

Q ss_pred             CCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          207 MTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       207 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      ....+.++.+++.+.++|+++..|+...+
T Consensus       154 ~~~~~~~~~~~~~a~~~g~~~~~h~~~~~  182 (301)
T d2puza2         154 AFSVKEIDRVFAAAQQRGLPVKLHAEQLS  182 (301)
T ss_dssp             SBCHHHHHHHHHHHHHTTCCBEEEESSSS
T ss_pred             ccCHHHHHHHHHHHHHCCCceeeeccccc
Confidence            46788999999999999999999986544

>d1o12a2 c.1.9.10 (A:44-331) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
species: Thermotoga maritima [TaxId: 2336]

Probab=98.05  E-value=1.5e-06  Score=76.42  Aligned_cols=56  Identities=23%  Similarity=0.188  Sum_probs=41.8

Q ss_pred             ceeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHH
Q 015826           99 GLIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVD  155 (399)
Q Consensus        99 GlID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~  155 (399)
                      ||||+|+|+..++....++....++.++++||||+++++ ++.|.....+.++....
T Consensus         1 GlID~HvH~~~~~~~~~~~~~~~~~~~l~~GvTTv~~~~-~t~~~~~~~~~~~~~~~   56 (288)
T d1o12a2           1 GFVDPHIHGVVGADTMNCDFSEMEEFLYSQGVTTFLATT-VSTSLEKMKEILRKARD   56 (288)
T ss_dssp             CEEEEEECEETTEETTTTCHHHHHHHHHTTTEEEEEEEC-CSCCHHHHHHHHHHHHH
T ss_pred             CeEEecccCCCCCccccccHHHHHHHHHhCCeEEEcCCC-CCCCHHHHHHHHHHHHH
Confidence            899999999887666677888889999999999999988 55543333333333333

>d2puza1 b.92.1.10 (A:17-79,A:381-420) Imidazolonepropionase {Agrobacterium tumefaciens [TaxId: 358]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Imidazolonepropionase
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=98.03  E-value=6.4e-06  Score=61.20  Aligned_cols=65  Identities=17%  Similarity=0.170  Sum_probs=51.2

Q ss_pred             cEEEEccEEEcCCC-------ceeeEEEEECCEEEEeccCCCCCCC-CCCCcEEeCCCCEEecceeecccccC
Q 015826           44 QYWLTSKRIVTPKG-------VISGAVEIKEGNIISIVSEEDWPRN-SKTGQVVDYGEAVIMPGLIDVHAHLD  108 (399)
Q Consensus        44 ~~li~n~~vv~~~~-------~~~~~V~I~dG~I~~Ig~~~~~~~~-~~~~~vID~~G~~vlPGlID~H~H~~  108 (399)
                      +.+++|++|.+++.       +.++.|.|+||||+++|+..+.+.. ..+.+++|++|+++.+..-..+-++-
T Consensus         2 ~~l~~n~~iaTm~~~~~~~g~ie~aAl~v~~g~I~~vG~~~~l~~~~~~aa~viDl~Grlv~i~~Gk~AD~~i   74 (103)
T d2puza1           2 TALWRNAQLATLNPAMDGIGAVENAVIAVRNGRIAFAGPESDLPDDLSTADETTDCGGRWITLEAGKSADFAI   74 (103)
T ss_dssp             EEEEEEEEEECCCTTSSTTCEEEEEEEEEETTEEEEEEETTSCCGGGSCCSEEEECTTCEEECCTTSBCCEEE
T ss_pred             cEEEEcCEEEEcCCCCCcchHHHHHHHHhhCCCccccChhhhcchhhhchHhhcCCCCCEEEeeccceeeEEE
Confidence            67999999998654       2579999999999999998765431 13568999999999987777666653

>d1ra0a2 c.1.9.5 (A:56-375) Cytosine deaminase catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Cytosine deaminase catalytic domain
domain: Cytosine deaminase catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=97.93  E-value=2e-05  Score=69.85  Aligned_cols=110  Identities=14%  Similarity=0.067  Sum_probs=58.5

Q ss_pred             HHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeee-eeeCCChhhHHHHHHHHHcCCcEEEEeecC
Q 015826          121 GTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG-GLVPENAYNASALEALLNAGVLGLKSFMCP  199 (399)
Q Consensus       121 ~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~  199 (399)
                      ..+.++++||||+.++..........................+...... ..........+.+++..+.+...+......
T Consensus        52 ~~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (320)
T d1ra0a2          52 TLKWQIANGIQHVRTHVDVSDATLTALKAMLEVKQEVAPWIDLQIVAFPQEGILSYPNGEALLEEALRLGADVVGAIPHF  131 (320)
T ss_dssp             HHHHHHHTTEEEEEEEEECCSTTCHHHHHHHHHHHHHTTTCEEEEEEECTTCSSSSTTHHHHHHHHHHTTCSEECCCGGG
T ss_pred             HHHHHHhCCeEEEEeccccccchHHHHHHHHHHHHhhcccccccccccccccccCcHHHHHHHHHHHHhcccccccCCCC
Confidence            3567899999999998722111111122222222222222222211110 011122234556677777777655432211


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          200 SGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       200 ~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .   .....+.+.++.+++.|++.|+++.+|+..
T Consensus       132 ~---~~~~~~~~~~~~~~~~A~~~g~~~~~h~~~  162 (320)
T d1ra0a2         132 E---FTREYGVESLHKTFALAQKYDRLIDVHCDE  162 (320)
T ss_dssp             S---SSHHHHHHHHHHHHHHHHHHTCEEEEEECC
T ss_pred             C---CCccccHHHHHHHHHHHHHcCCCeeeeecc
Confidence            1   111245788999999999999999999754

>d1xwya1 c.1.9.12 (A:1-260) Deoxyribonuclease TatD (MttC) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: TatD Mg-dependent DNase-like
domain: Deoxyribonuclease TatD (MttC)
species: Escherichia coli [TaxId: 562]

Probab=97.75  E-value=0.00011  Score=64.14  Aligned_cols=126  Identities=13%  Similarity=0.096  Sum_probs=69.7

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC--ceeEEeeeeeeCC-Ch
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI--YVDVGFWGGLVPE-NA  176 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~  176 (399)
                      +||+|+|+....+  .++...-...|...||+.++...       .+.+.....++.+....  +..+|.|...... ..
T Consensus         1 liD~H~HL~~~~f--~~d~~~vl~~a~~~gV~~ii~~~-------~~~~~~~~~~~la~~~~~v~~a~GiHP~~~~~~~~   71 (260)
T d1xwya1           1 MFDIGVNLTSSQF--AKDRDDVVACAFDAGVNGLLITG-------TNLRESQQAQKLARQYSSCWSTAGVHPHDSSQWQA   71 (260)
T ss_dssp             CEEEEECTTSGGG--TTTHHHHHHHHHHTTCCEEEECC-------CSHHHHHHHHHHHHHSTTEEEEECCCGGGGGGCCH
T ss_pred             CEEEEeCCCChHH--hCCHHHHHHHHHHCCCCEEEEec-------CCHHHHHHHHHHHHhCCcccchhhcCcchhhhhhh
Confidence            6999999976433  24566667888999999998554       23455555555544332  2233333222211 22


Q ss_pred             hhHHHHHHHHHc-CCcEEEE-eecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          177 YNASALEALLNA-GVLGLKS-FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       177 ~~~~~l~~l~~~-G~~~ik~-~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      ...+.+.++.+. .+..|.- .+.+.-.........+.+.+-++.|+++++||.+|+.+.
T Consensus        72 ~~~~~~~~~~~~~~~vaIGEiGLD~~~~~~~~~~q~~~f~~ql~lA~~~~lPviiH~r~a  131 (260)
T d1xwya1          72 ATEEAIIELAAQPEVVAIGECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDA  131 (260)
T ss_dssp             HHHHHHHHHHTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC
T ss_pred             hHHHHHHHHHhcchhhhhhhhcccccccccchHHHHHHHHHHHHHHHhcCCceEeeeccc
Confidence            234445555543 3333322 222210000001123457778899999999999999653

>d2q09a2 c.1.9.17 (A:66-366) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Probable 4-imidazolone-5-propanoate amidohydrolase GOS 1928421
species: Environmental samples

Probab=97.73  E-value=0.0004  Score=59.72  Aligned_cols=26  Identities=8%  Similarity=0.066  Sum_probs=20.0

Q ss_pred             CCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          208 TNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       208 ~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ............++..+..+.+|+..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~h~~~  180 (301)
T d2q09a2         155 FSLAQTEQVYLAADQYGLAVKGHMDQ  180 (301)
T ss_dssp             BCHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             cchhhHHHHHHHHHHhcccceecccc
Confidence            45566777778888899999999754

>d1yixa1 c.1.9.12 (A:1-265) Putative deoxyribonuclease YcfH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: TatD Mg-dependent DNase-like
domain: Putative deoxyribonuclease YcfH
species: Escherichia coli [TaxId: 562]

Probab=97.66  E-value=0.00036  Score=60.86  Aligned_cols=126  Identities=18%  Similarity=0.206  Sum_probs=71.2

Q ss_pred             eeecccccCCCCCC-CcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeeeeeeCC---C
Q 015826          100 LIDVHAHLDDPGRT-EWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWGGLVPE---N  175 (399)
Q Consensus       100 lID~H~H~~~~~~~-~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~  175 (399)
                      |||+|+|+....+. ..++...-...+...||+.++...       .+.+.....++.......+-+  ..|+.+.   .
T Consensus         3 lIDtH~Hld~~~~e~~~~d~~~vi~~a~~~gv~~ii~~~-------~~~~~~~~~~~l~~~~~~i~~--~~GiHP~~~~~   73 (265)
T d1yixa1           3 LVDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVA-------TTLPSYLHMRDLVGERDNVVF--SCGVHPLNQND   73 (265)
T ss_dssp             EEEEEECGGGSCTTTTCSSHHHHHHHHHHTTEEEEEECC-------SSHHHHHHHHHHHCSCTTEEE--EECCCTTCCSS
T ss_pred             EEEecccCCccccchhhcCHHHHHHHHHHcCCCEEEEee-------CCHHHHHHHHHHHHhcccccc--ccccccccccc
Confidence            79999999754322 234566667788899999887543       234555555555543332222  2233332   1


Q ss_pred             hhhHHHHHHHHHc-CCcEEE-EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          176 AYNASALEALLNA-GVLGLK-SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       176 ~~~~~~l~~l~~~-G~~~ik-~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      ....+.++++... .+.++. +.+.+.-.........+.+.+-++.|+++++|+.+|+.+.
T Consensus        74 ~~~~e~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~q~~~f~~ql~lA~~~~lPv~iH~r~a  134 (265)
T d1yixa1          74 PYDVEDLRRLAAEEGVVALGETGLDYYYTPETKVRQQESFIHHIQIGRELNKPVIVHTRDA  134 (265)
T ss_dssp             CCCHHHHHHHHTSTTEEEEEEEEEECTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC
T ss_pred             ccchHHHHHHhccCCceeeecccccccccccchHHHHHHHHHHHHHHHHhCCCcccchhhH
Confidence            2345677777653 344442 2222210000001123457788899999999999999753

>d1j6oa_ c.1.9.12 (A:) Hypothetical protein TM0667 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: TatD Mg-dependent DNase-like
domain: Hypothetical protein TM0667
species: Thermotoga maritima [TaxId: 2336]

Probab=97.62  E-value=0.00012  Score=63.74  Aligned_cols=126  Identities=15%  Similarity=0.129  Sum_probs=71.1

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccC--ceeEEeeeeeeC-CCh
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRI--YVDVGFWGGLVP-ENA  176 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~  176 (399)
                      +||+|+|+....+.  ++.......+...||+.++...       .+.+.....++.+....  +..+|+|..... ...
T Consensus         5 lIDsH~HLd~~~~~--~d~~~vi~~a~~~gV~~ii~~~-------~~~~~~~~~~~la~~~~~i~~a~GiHP~~~~~~~~   75 (260)
T d1j6oa_           5 MVDTHAHLHFHQFD--DDRNAVISSFEENNIEFVVNVG-------VNLEDSKKSLDLSKTSDRIFCSVGVHPHDAKEVPE   75 (260)
T ss_dssp             EEEEEECTTSGGGT--TTHHHHHHTTTTTTEEEEEEEC-------SSHHHHHHHHHHHTTCTTEEEEECCCGGGGGGCCT
T ss_pred             cEEeccCCCChhhC--cCHHHHHHHHHHCCCCEEEEec-------CCHHHHHHHHHHHHhccccccccccChhhcccccc
Confidence            79999999754322  3455556777889999987543       13455555555554332  223333332221 122


Q ss_pred             hhHHHHHHHHHcC-CcEEE-EeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          177 YNASALEALLNAG-VLGLK-SFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       177 ~~~~~l~~l~~~G-~~~ik-~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      +..+.++.+++.. +.+|. +.+.+.-.........+.+.+.++.|+++++|+.+|+.+.
T Consensus        76 ~~~~~l~~~~~~~~vvaIGEiGLD~~~~~~~~~~Q~~vF~~ql~lA~~~~lPviiH~r~a  135 (260)
T d1j6oa_          76 DFIEHLEKFAKDEKVVAIGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIRDA  135 (260)
T ss_dssp             THHHHHHHHTTSTTEEEEEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESC
T ss_pred             hhhhhhHHHHhhCCeeeEeeccccccccccHHHHHHHHHHHHHHHHHhcCcceEEeeccc
Confidence            3456677776543 33332 2222210000001123568889999999999999999653

>d2r8ca2 c.1.9.18 (A:58-368) Uncharacterized protein EAJ56179 {Unidentified organism [TaxId: 32644]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Zn-dependent arginine carboxypeptidase-like
domain: Uncharacterized protein EAJ56179
species: Unidentified organism [TaxId: 32644]

Probab=97.60  E-value=0.00043  Score=59.91  Aligned_cols=31  Identities=13%  Similarity=-0.021  Sum_probs=24.4

Q ss_pred             CCCCHHHHHHHHHHHHhcCCCEEEecCChhh
Q 015826          206 PMTNASHIKEGLSVLARYKRPLLVHAEMEKG  236 (399)
Q Consensus       206 ~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~  236 (399)
                      ..+........++.+.+.+.....|......
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (311)
T d2r8ca2         151 FGYSEDEIRAIVAEAQGRGTYVLAHAYTPAA  181 (311)
T ss_dssp             BCSCHHHHHHHHHHHHHTTCCEEEEECSHHH
T ss_pred             ccccHHHHHHHHHHHHHhccccccccchhHH
Confidence            3567788888888889999999999866544

>d1zzma1 c.1.9.12 (A:1-259) Putative deoxyribonuclease YjjV {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: TatD Mg-dependent DNase-like
domain: Putative deoxyribonuclease YjjV
species: Escherichia coli [TaxId: 562]

Probab=97.57  E-value=0.00071  Score=58.73  Aligned_cols=126  Identities=21%  Similarity=0.308  Sum_probs=63.7

Q ss_pred             eeecccccCCCCCCCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhcc--CceeEEeeeeeeCC-Ch
Q 015826          100 LIDVHAHLDDPGRTEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKR--IYVDVGFWGGLVPE-NA  176 (399)
Q Consensus       100 lID~H~H~~~~~~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~  176 (399)
                      |||+|+|++...+  .++.......+...||+.++...  +.+     +..+...+.....  ....++.|...... ..
T Consensus         5 ~ID~H~HLd~~~~--~~d~~~~l~~a~~~gV~~~v~~~--t~~-----~~~~~~~~l~~~~~~i~~~~GiHP~~~~~~~~   75 (259)
T d1zzma1           5 FIDTHCHFDFPPF--SGDEEASLQRAAQAGVGKIIVPA--TEA-----ENFARVLALAENYQPLYAALGLHPGMLEKHSD   75 (259)
T ss_dssp             EEESCBCTTSTTT--TTCHHHHHHHHHHTTEEEEEEEC--CSG-----GGHHHHHHHHHHCTTEEEEECCCGGGGGGCCH
T ss_pred             EEEeCcCCCChhh--CcCHHHHHHHHHHcCCCEEEEec--CCH-----HHHHHHHHHHhcCccccccccCCchHhhccch
Confidence            7999999965432  33556667788899999887554  122     2233333333222  22223333221111 22


Q ss_pred             hhHHHHHHHHH---cCCcEEEE-eecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          177 YNASALEALLN---AGVLGLKS-FMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       177 ~~~~~l~~l~~---~G~~~ik~-~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      ...+.+..+..   ..+.++.- .+.+...........+.+++.++.|+++++|+.+|+...
T Consensus        76 ~~~~~~~~~~~~~~~~~v~iGEiGld~~~~~~~~~~q~~~f~~ql~lA~~~~~Pv~IH~r~a  137 (259)
T d1zzma1          76 VSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQWLLDEQLKLAKRYDLPVILHSRRT  137 (259)
T ss_dssp             HHHHHHHHHHHHCCSSEEEEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESC
T ss_pred             hhHHHHHHHHhccCcccceeccccccccccchhhhHHHHHHHHHHHHHHHhccchhhhhHHH
Confidence            22334444433   22233221 121110000001124577788999999999999998643

>d1o12a1 b.92.1.5 (A:1-43,A:332-364) N-acetylglucosamine-6-phosphate deacetylase, NagA {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: N-acetylglucosamine-6-phosphate deacetylase, NagA
domain: N-acetylglucosamine-6-phosphate deacetylase, NagA
species: Thermotoga maritima [TaxId: 2336]

Probab=97.55  E-value=7.9e-05  Score=48.62  Aligned_cols=50  Identities=28%  Similarity=0.393  Sum_probs=39.9

Q ss_pred             EEEccEEEcCCC-ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecceeeccccc
Q 015826           46 WLTSKRIVTPKG-VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLIDVHAHL  107 (399)
Q Consensus        46 li~n~~vv~~~~-~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlID~H~H~  107 (399)
                      +|.+..|+||-. .+-++|.+++|+|..|-+....            -..++||||+|.|.|-
T Consensus         2 ~iE~VLIVDPidGEyTGdvEf~e~kI~~I~k~ect------------p~~ilMP~f~dg~~a~   52 (76)
T d1o12a1           2 IVEKVLIVDPIDGEFTGDVEIEEGKIVKVEKRECI------------PRGVLMPRIAEGTRAD   52 (76)
T ss_dssp             EEEEEEEEETTTEEEEEEEEEETTEEEEEEECCSC------------CSSEEEECCSTTSBCC
T ss_pred             ceeeEEEEcCCCCcEeeeEEecCcEEEEEEEeccC------------CCeEEcccccCCcccc
Confidence            678899998854 5789999999999999765321            1257999999999884

>d2ooda2 c.1.9.9 (A:73-397) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Guanine deaminase
species: Bradyrhizobium japonicum [TaxId: 375]

Probab=97.49  E-value=6.4e-05  Score=66.74  Aligned_cols=16  Identities=31%  Similarity=0.233  Sum_probs=13.3

Q ss_pred             HHHHHcCCeeeeecCc
Q 015826          122 TKAAAAGGITTLIDMP  137 (399)
Q Consensus       122 ~~~al~~GvTtv~d~~  137 (399)
                      .+.++.+||||+.|+.
T Consensus        52 ~~~~l~~G~Tt~~d~~   67 (325)
T d2ooda2          52 LDALLAAGTTTCQAFT   67 (325)
T ss_dssp             HHHHHHTTEEEEEEEC
T ss_pred             HHHHHhCCeEEEeecc
Confidence            4557899999999986

>d2p9ba2 c.1.9.17 (A:71-394) Uncharacterized protein BL1453 {Bifidobacterium longum [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Uncharacterized protein BL1453
species: Bifidobacterium longum [TaxId: 216816]

Probab=97.44  E-value=0.0007  Score=58.35  Aligned_cols=29  Identities=10%  Similarity=0.084  Sum_probs=22.3

Q ss_pred             CCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          207 MTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       207 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      ..+..............+.....|.....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  181 (324)
T d2p9ba2         153 QMSVEQMRAICDEAHQYGVIVGAHAQSPE  181 (324)
T ss_dssp             CCCHHHHHHHHHHHHHTTCCEEEEECSHH
T ss_pred             hccHHHHHHHHHHHHHcCCccccccccch
Confidence            45667778888888889999998875543

>d2qs8a2 c.1.9.18 (A:64-373) Xaa-Pro dipeptidase {Alteromonas macleodii [TaxId: 28108]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Zn-dependent arginine carboxypeptidase-like
domain: Xaa-Pro dipeptidase
species: Alteromonas macleodii [TaxId: 28108]

Probab=97.43  E-value=0.0015  Score=56.13  Aligned_cols=30  Identities=20%  Similarity=0.194  Sum_probs=23.7

Q ss_pred             CCCHHHHHHHHHHHHhcCCCEEEecCChhh
Q 015826          207 MTNASHIKEGLSVLARYKRPLLVHAEMEKG  236 (399)
Q Consensus       207 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~  236 (399)
                      .............+.+++.....|......
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  178 (310)
T d2qs8a2         149 QFTQEEVDAVVSAAKDYGMWVAVHAHGAEG  178 (310)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEEEECSHHH
T ss_pred             hhhHHHHHHHHHHHHHcCCcccccccchHH
Confidence            456777888888889999999999876553

>d1yrra2 c.1.9.10 (A:54-350) N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
domain: N-acetylglucosamine-6-phosphate deacetylase, NagA, catalytic domain
species: Escherichia coli [TaxId: 562]

Probab=97.38  E-value=4e-05  Score=66.38  Aligned_cols=39  Identities=23%  Similarity=0.195  Sum_probs=29.7

Q ss_pred             ceeecccccCC-------CCCCCcCchHHHHHHHHcCCeeeeecCc
Q 015826           99 GLIDVHAHLDD-------PGRTEWEGFPSGTKAAAAGGITTLIDMP  137 (399)
Q Consensus        99 GlID~H~H~~~-------~~~~~~e~~~~~~~~al~~GvTtv~d~~  137 (399)
                      ||||+|+|+..       +...+.+++...++.++++||||+++++
T Consensus         1 GlID~H~H~~~g~~~~~~~~~~~~~~~~~~~~~~l~~GvTtv~~~~   46 (297)
T d1yrra2           1 GFIDVQLNGCGGVQFNDTAEAVSVETLEIMQKANEKSGCTNYLPTL   46 (297)
T ss_dssp             CEEEEEESEETTEESSSSTTTSSHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred             CEEeHhhCCcCCCCCCCCcccCCHHHHHHHHHHHHccCeEEEeCCC
Confidence            89999999632       2333445566678889999999999876

>d2q09a1 b.92.1.10 (A:4-65,A:367-407) Probable 4-imidazolone-5-propanoate amidohydrolase GOS_1928421 {Environmental samples}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Imidazolonepropionase-like
domain: Probable 4-imidazolone-5-propanoate amidohydrolase GOS 1928421
species: Environmental samples

Probab=97.05  E-value=0.00046  Score=50.06  Aligned_cols=53  Identities=15%  Similarity=0.152  Sum_probs=41.4

Q ss_pred             cEEEEccEEEcCCC-------ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEe
Q 015826           44 QYWLTSKRIVTPKG-------VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIM   97 (399)
Q Consensus        44 ~~li~n~~vv~~~~-------~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vl   97 (399)
                      +.+.+|+++-+++.       +.++.|.|++|||..|++..+.+... +....|++|+++.
T Consensus         3 d~lw~n~~lATm~~~~~~yG~ie~~ai~v~~g~I~~vgp~~~lpa~~-~~~~~d~~gr~~t   62 (103)
T d2q09a1           3 ERVWLNVTPATLRSDLADYGLLEPHALGVHEGRIHALVPMQDLKGPY-PAHWQDMKGKLVT   62 (103)
T ss_dssp             SEEEEEEEEBCCCTTSSTTCBCSSEEEEEETTEEEEEEEGGGCC--C-CTTSEECTTCEEE
T ss_pred             ceeeecCEEEEecCCCCCcceeccceEEEeCCeEEEEEehhhCCccc-cchhhhcccceEE
Confidence            67899999997653       24899999999999999987766432 4567899999765

>d3be7a2 c.1.9.18 (A:57-359) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Zn-dependent arginine carboxypeptidase-like
domain: Zn-dependent arginine carboxypeptidase
species: Unidentified organism [TaxId: 32644]

Probab=97.01  E-value=0.00022  Score=61.55  Aligned_cols=29  Identities=10%  Similarity=-0.088  Sum_probs=22.5

Q ss_pred             CCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          207 MTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       207 ~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      ........+....++.++.....|.....
T Consensus       144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (303)
T d3be7a2         144 QFTLEEMKAIVDEAHNHGMKVAAHAHGLI  172 (303)
T ss_dssp             CSCHHHHHHHHHHHHHTTCEEEEEECSHH
T ss_pred             chhhHHHHHHHHHHHHhCcchhhhhhhhh
Confidence            45677888888888999998888876543

>d2icsa1 b.92.1.8 (A:4-54,A:322-371) Putative adenine deaminase EF0837 {Enterococcus faecalis [TaxId: 1351]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Adenine deaminase
domain: Putative adenine deaminase EF0837
species: Enterococcus faecalis [TaxId: 1351]

Probab=96.62  E-value=0.001  Score=47.96  Aligned_cols=50  Identities=10%  Similarity=0.149  Sum_probs=38.7

Q ss_pred             ccEEEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEecc
Q 015826           43 NQYWLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPG   99 (399)
Q Consensus        43 ~~~li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPG   99 (399)
                      +|++|+|++.+++.   .-+|.|.+|||+++++....    ++.+++|+.|+.=+-|
T Consensus         2 ~d~~i~~~~~~~g~---~~diai~~~ki~a~~~~~~~----~a~~~~~L~~~~y~sG   51 (101)
T d2icsa1           2 YDLLIKNGQTVNGM---PVEIAIKEKKIAAVAATISG----SAKETIHLEPGTYVSA   51 (101)
T ss_dssp             EEEEEEEEECTTSC---EEEEEEETTEEEEEESCCCC----CEEEEEECCTTCEEEE
T ss_pred             ccEEEEcceecCCC---eEEEEeccCeeeeecccccc----cchheEecCCceeeee
Confidence            58999999998763   57899999999999976533    3678999998533333

>d1ra0a1 b.92.1.2 (A:4-55,A:376-426) Cytosine deaminase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Cytosine deaminase
domain: Cytosine deaminase
species: Escherichia coli [TaxId: 562]

Probab=96.59  E-value=0.0015  Score=47.18  Aligned_cols=52  Identities=17%  Similarity=0.334  Sum_probs=39.7

Q ss_pred             EEEccEEEcCCCceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEeccee
Q 015826           46 WLTSKRIVTPKGVISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLI  101 (399)
Q Consensus        46 li~n~~vv~~~~~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlI  101 (399)
                      .|+|+++-.-+|.  -+|.|+||+|.+|.+.....  ......+|++|.++.|-+|
T Consensus         4 ~I~NarL~gr~GL--~~I~I~~G~i~~I~pq~~~~--~~~~d~lDa~GgL~~p~~i   55 (103)
T d1ra0a1           4 TIINARLPGEEGL--WQIHLQDGKISAIDAQSGVM--PITENSLDAEQGLVIPLII   55 (103)
T ss_dssp             EEEEEBCTTCCSE--EEEEEETTEEEEEEEESSCC--CCCTTEEECTTCEEESEEE
T ss_pred             eEEEEEeCCCCcE--EEEEecCCEEeeeecCCccc--cCCCcceeccCCcccCcEE
Confidence            5899998776665  46999999999999765432  1355789999999999333

>d2f6ka1 c.1.9.15 (A:2-307) Putative amidohydrolase LP2961 {Lactobacillus plantarum [TaxId: 1590]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: PP1699/LP2961-like
domain: Putative amidohydrolase LP2961
species: Lactobacillus plantarum [TaxId: 1590]

Probab=96.52  E-value=0.0063  Score=53.70  Aligned_cols=54  Identities=13%  Similarity=0.188  Sum_probs=41.0

Q ss_pred             hhHHHHHHHHH-cCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          177 YNASALEALLN-AGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       177 ~~~~~l~~l~~-~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      ...+++++.++ .|+.|+++.....+   . ..+++.+..+++.|.++|++|.+|....
T Consensus       103 ~a~~el~r~~~~~G~~Gi~~~~~~~~---~-~~~dp~~~pi~~~~~e~~lpv~~H~~~~  157 (306)
T d2f6ka1         103 DAVKTVQQALDQDGALGVTVPTNSRG---L-YFGSPVLERVYQELDARQAIVALHPNEP  157 (306)
T ss_dssp             HHHHHHHHHHHTSCCSEEEEESEETT---E-ETTCGGGHHHHHHHHTTTCEEEEECCCC
T ss_pred             HHHHHHHHHHhcccceEEEecCcccc---c-cCCCccchHHHHHHHHcCCceEeccCCC
Confidence            45678888776 59999998644322   1 3466788999999999999999997543

>d2hbva1 c.1.9.15 (A:3-333) 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD {Pseudomonas fluorescens [TaxId: 294]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: PP1699/LP2961-like
domain: 2-amino-3-carboxymuconate 6-semialdehyde decarboxylase NbaD
species: Pseudomonas fluorescens [TaxId: 294]

Probab=95.59  E-value=0.031  Score=49.34  Aligned_cols=53  Identities=19%  Similarity=0.141  Sum_probs=42.4

Q ss_pred             hhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          177 YNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       177 ~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      ...++++++.+.|..++++.....+    ...++..+..+++.|.++|++|.+|+.+
T Consensus       126 ~a~~el~r~~~~g~~g~~l~~~~~~----~~~~d~~~~p~~~~~~e~~~pv~iH~~~  178 (331)
T d2hbva1         126 LACKEASRAVAAGHLGIQIGNHLGD----KDLDDATLEAFLTHCANEDIPILVHPWD  178 (331)
T ss_dssp             HHHHHHHHHHHHTCCCEEEESCBTT----BCTTSHHHHHHHHHHHHTTCCEEEECCS
T ss_pred             hhhhHHHHhhhhcceeeeecccccC----cccccchhhHHHHHHhccCCceEEecCC
Confidence            4578888988999999988643322    2457789999999999999999999854

>d2dvta1 c.1.9.15 (A:1-325) Thermophilic reversible gamma-resorcylate decarboxylase {Rhizobium sp. MTP-10005 [TaxId: 267998]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: PP1699/LP2961-like
domain: Thermophilic reversible gamma-resorcylate decarboxylase
species: Rhizobium sp. MTP-10005 [TaxId: 267998]

Probab=95.46  E-value=0.019  Score=50.93  Aligned_cols=58  Identities=10%  Similarity=0.083  Sum_probs=42.3

Q ss_pred             hhHHHHHHHHH-cCCcEEEEeecCCCCC--CCCCCCHHHHHHHHHHHHhcCCCEEEecCCh
Q 015826          177 YNASALEALLN-AGVLGLKSFMCPSGIN--DFPMTNASHIKEGLSVLARYKRPLLVHAEME  234 (399)
Q Consensus       177 ~~~~~l~~l~~-~G~~~ik~~~~~~~~~--~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~  234 (399)
                      ...+++++.++ .|..++++.....+..  ..+..+++.+..+++.+.++|++|.+|+.+.
T Consensus       108 ~a~~el~r~~~~~g~~Gv~l~~~~~~~~~~~~~~~~d~~~~pi~~~~~e~~lpv~iH~~~~  168 (325)
T d2dvta1         108 AATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHPRNP  168 (325)
T ss_dssp             HHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHTCCEEEECCCC
T ss_pred             hhhhhhhhhhhcccceEEEEeCCCcCCCCCCcccccCcccchHHHHHhhCCceEEEecCCC
Confidence            45778888776 5888998764432211  1234577789999999999999999998654

>d2gwga1 c.1.9.15 (A:1-342) 4-oxalomesaconate hydratase LigJ {Rhodopseudomonas palustris [TaxId: 1076]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: PP1699/LP2961-like
domain: 4-oxalomesaconate hydratase LigJ
species: Rhodopseudomonas palustris [TaxId: 1076]

Probab=91.52  E-value=0.18  Score=44.20  Aligned_cols=59  Identities=15%  Similarity=0.132  Sum_probs=40.9

Q ss_pred             hhHHHHHHHH-HcCCcEEEEeecCCCCC-CCCCCCHHHHHHHHHHHHhcCCCEEEecCChh
Q 015826          177 YNASALEALL-NAGVLGLKSFMCPSGIN-DFPMTNASHIKEGLSVLARYKRPLLVHAEMEK  235 (399)
Q Consensus       177 ~~~~~l~~l~-~~G~~~ik~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~  235 (399)
                      ...+++++.+ +.|..+++......+.. ..+..+++.+..+++.|.++|+++.+|+....
T Consensus       123 ~a~~e~~~~~~~~~~~gi~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~glpv~~H~~~~~  183 (342)
T d2gwga1         123 TCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELEIPAMIHVSTSC  183 (342)
T ss_dssp             GGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHTCCEEECCCC--
T ss_pred             HHHHHHhhhHhhccceEEEEeccccccccCCCCCCCHHHHHHHHHhhcCCCeEEEccCCCc
Confidence            4566777665 46888998865432211 12345778999999999999999999986543

>d1a4ma_ c.1.9.1 (A:) Adenosine deaminase (ADA) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenosine/AMP deaminase
domain: Adenosine deaminase (ADA)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.37  E-value=1.9  Score=37.78  Aligned_cols=105  Identities=14%  Similarity=0.066  Sum_probs=63.1

Q ss_pred             HHHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceE
Q 015826          211 SHIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHL  290 (399)
Q Consensus       211 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~v  290 (399)
                      ..+.++++.|++.|+.+.+|+.....                             ...+..++...          +.. 
T Consensus       192 ~~~~~~f~~ar~~gl~~t~HaGE~~~-----------------------------~~~i~~ai~~l----------~~~-  231 (349)
T d1a4ma_         192 PGHVEAYEGAVKNGIHRTVHAGEVGS-----------------------------PEVVREAVDIL----------KTE-  231 (349)
T ss_dssp             HHHHHHHHHHHHHTCEEEEEESSSSC-----------------------------HHHHHHHHHTS----------CCS-
T ss_pred             HHHHHHHHHHHHcCCceeeccCCCCC-----------------------------hHHHHHHHHHh----------CCc-
Confidence            45778899999999999999843210                             11344444332          221 


Q ss_pred             EEEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCCC
Q 015826          291 HIVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDHS  370 (399)
Q Consensus       291 hi~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh~  370 (399)
                      -|.|.....+.-++++..++++  |.+|+||-.=..           .+..++++.-    .+.+.++.|..-+|+||.-
T Consensus       232 RIGHG~~l~~d~~l~~~~~~~~--I~lEvCptSN~~-----------~~~~~~~~~H----P~~~~~~~gv~v~i~TDDp  294 (349)
T d1a4ma_         232 RVGHGYHTIEDEALYNRLLKEN--MHFEVCPWSSYL-----------TGAWDPKTTH----AVVRFKNDKANYSLNTDDP  294 (349)
T ss_dssp             EEEECGGGGGSHHHHHHHHHTT--CEEEECHHHHHH-----------SSSSCTTSCC----HHHHHHHTTCCEEECCBCT
T ss_pred             ccCCceecccCHHHHHHhhhcC--ceEEEccccccc-----------ccccCchhhH----HHHHHHHCCCeEEEeCCCc
Confidence            5788753224556777777775  566788842000           1113333322    2566778899999999975


Q ss_pred             CC
Q 015826          371 PT  372 (399)
Q Consensus       371 p~  372 (399)
                      ..
T Consensus       295 ~~  296 (349)
T d1a4ma_         295 LI  296 (349)
T ss_dssp             TT
T ss_pred             cc
Confidence            43

>d2ooda1 b.92.1.4 (A:3-72,A:398-467) Guanine deaminase {Bradyrhizobium japonicum [TaxId: 375]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: SAH/MTA deaminase-like
domain: Guanine deaminase
species: Bradyrhizobium japonicum [TaxId: 375]

Probab=89.26  E-value=0.026  Score=43.17  Aligned_cols=39  Identities=13%  Similarity=0.199  Sum_probs=29.3

Q ss_pred             eeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEe
Q 015826           59 ISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIM   97 (399)
Q Consensus        59 ~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vl   97 (399)
                      .++-++|+||+|+++|+........++.+++|..+++..
T Consensus        32 ~DG~llie~G~I~a~G~~~~l~~~~pga~v~d~~d~lg~   70 (140)
T d2ooda1          32 QDGLMVVTDGVIKAFGPYEKIAAAHPGVEITHIKDRIIV   70 (140)
T ss_dssp             EEEEEEEESSBEEEEEEHHHHHHHSTTCEEEEEEEEEEE
T ss_pred             cCcEEEEeCCEEEEecCHHHHhhcCCCceEEecCCceEe
Confidence            378999999999999976543222357789998887654

>d2ffia1 c.1.9.15 (A:10-280) Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699 {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: PP1699/LP2961-like
domain: Putative 2-pyrone-4,6-dicarboxylic acid hydrolase PP1699
species: Pseudomonas putida [TaxId: 303]

Probab=88.85  E-value=1  Score=36.76  Aligned_cols=123  Identities=15%  Similarity=0.089  Sum_probs=63.2

Q ss_pred             eeecccccCCC--------CC--CCcCchHHHHHHHHcCCeeeeecCcCCCCCCCCcHHHHHHHHHHHhccCceeEEeee
Q 015826          100 LIDVHAHLDDP--------GR--TEWEGFPSGTKAAAAGGITTLIDMPLNSDPSTISTETLKLKVDAAEKRIYVDVGFWG  169 (399)
Q Consensus       100 lID~H~H~~~~--------~~--~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  169 (399)
                      -||+|+|+...        +.  ....+.......+-+.||+..+.++..... ..+ +......+..... ...+   .
T Consensus         5 ~ID~H~Hl~~~~~~~~~~~~~~~~~~~~~e~ll~~m~~~gI~~~vl~~~~~~~-~~n-~~~~~~~~~~~~~-~~~~---~   78 (271)
T d2ffia1           5 AIDSHAHVFSRGLNLASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLG-TDN-RYLLSALQTVPGQ-LRGV---V   78 (271)
T ss_dssp             CEEBCCCCBCHHHHHHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGT-TCC-HHHHHHHHHSTTT-BCCB---B
T ss_pred             EEeeeecccCCccccccccCCCCCCCCCHHHHHHHHHHcCCCEEEEECCCccc-chh-HHHHHHHHhhcCc-eEEE---E
Confidence            59999998422        11  111234455666778999976654311111 112 2222222222111 1111   1


Q ss_pred             eeeCCChhhHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCCEEEecCC
Q 015826          170 GLVPENAYNASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRPLLVHAEM  233 (399)
Q Consensus       170 ~~~~~~~~~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~  233 (399)
                      .+.+..  ..+..+++...+..+++......   .....++...+..++.+.+++.++..|...
T Consensus        79 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (271)
T d2ffia1          79 MLERDV--EQATLAEMARLGVRGVRLNLMGQ---DMPDLTGAQWRPLLERIGEQGWHVELHRQV  137 (271)
T ss_dssp             CCCSSC--CHHHHHHHHTTTCCEEECCCSSS---CCCCTTSTTTHHHHHHHHHHTCEEEECSCT
T ss_pred             EEeccc--chHHHHHHHHhhhccceeccccc---cCCCcccHhHHHHHHHHHHhCCCcccccCc
Confidence            111111  22445555566666665433222   112345567888899999999999999854

>d3be7a1 b.92.1.9 (A:3-56,A:360-400) Zn-dependent arginine carboxypeptidase {Unidentified organism [TaxId: 32644]}

class: All beta proteins
fold: Composite domain of metallo-dependent hydrolases
superfamily: Composite domain of metallo-dependent hydrolases
family: Zn-dependent arginine carboxypeptidase-like
domain: Zn-dependent arginine carboxypeptidase
species: Unidentified organism [TaxId: 32644]

Probab=88.76  E-value=0.45  Score=33.27  Aligned_cols=61  Identities=18%  Similarity=0.312  Sum_probs=46.7

Q ss_pred             ccEEEEccEEEcCCC--ceeeEEEEECCEEEEeccCCCCCCCCCCCcEEeCCCCEEeccee---ecccccC
Q 015826           43 NQYWLTSKRIVTPKG--VISGAVEIKEGNIISIVSEEDWPRNSKTGQVVDYGEAVIMPGLI---DVHAHLD  108 (399)
Q Consensus        43 ~~~li~n~~vv~~~~--~~~~~V~I~dG~I~~Ig~~~~~~~~~~~~~vID~~G~~vlPGlI---D~H~H~~  108 (399)
                      .+++|+.-..++...  ...+++.|++|+|.+|+....     .+++++...+++++|++-   ++|.++-
T Consensus         2 ~d~~~~pk~yL~~~~g~li~a~l~v~~G~i~ai~~~t~-----~~A~il~l~d~illG~I~~Gk~ADlvlv   67 (95)
T d3be7a1           2 EDFLIKSKGYLDIQTGEIIKADLLIRNGKIAEIGKINT-----KDATVISIPDLILIPQIKEGFDADIVGV   67 (95)
T ss_dssp             CCEEEEEEEEECTTTCCEECCEEEEETTEEEEEECCCC-----SSSEEEEEEEEEEEESCCTTSBCCEEEE
T ss_pred             CceEecCcceeccccchhhhhhhhhhcCcHHHHHhhcc-----ChHHhcCCCCccccceeccCceeeEEEE
Confidence            378889888887544  358999999999999986432     367899999988777775   6666653

>d1xp3a1 c.1.15.1 (A:2-298) Endonuclease IV {Bacillus anthracis [TaxId: 1392]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Xylose isomerase-like
family: Endonuclease IV
domain: Endonuclease IV
species: Bacillus anthracis [TaxId: 1392]

Probab=83.72  E-value=4.5  Score=34.34  Aligned_cols=55  Identities=13%  Similarity=0.118  Sum_probs=41.6

Q ss_pred             hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCC-CEEEecC
Q 015826          178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKR-PLLVHAE  232 (399)
Q Consensus       178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~-~v~~H~~  232 (399)
                      ....+++..+.|+..|.+|...+..-..+..+++++.+..+.++++|+ ++.+|+-
T Consensus        15 ~~~a~~~a~~~g~~~~QiF~~~p~~~~~~~~~~~~~~~~~~~~~~~~i~~i~vHap   70 (297)
T d1xp3a1          15 LLAASEEAVSYGATTFMIYTGAPQNTRRKPIEELNIEAGRKHMEQNGIEEIIIHAP   70 (297)
T ss_dssp             HHHHHHHHHTTTCSSEEECSSCTTCCCCCCGGGGCHHHHHHHHHHTTCCCEEEECC
T ss_pred             HHHHHHHHHHcCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHcCCchhhhcCc
Confidence            356778888889999999876543212234677888888899999998 6999984

>d2amxa1 c.1.9.1 (A:20-376) Adenosine deaminase (ADA) {Plasmodium yoelii [TaxId: 5861]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Metallo-dependent hydrolases
family: Adenosine/AMP deaminase
domain: Adenosine deaminase (ADA)
species: Plasmodium yoelii [TaxId: 5861]

Probab=82.64  E-value=4.8  Score=35.10  Aligned_cols=104  Identities=17%  Similarity=0.140  Sum_probs=57.4

Q ss_pred             HHHHHHHHHHhcCCCEEEecCChhhchhHHhhccCcCCchhhhcCCCCCChHHHHHHHHHHHHHHhhhccCCCCCCceEE
Q 015826          212 HIKEGLSVLARYKRPLLVHAEMEKGSERHVKLEDDTLDTRSYSTYLKTRPPSWEEAAIRELLTVAKDTRTDGPAEGAHLH  291 (399)
Q Consensus       212 ~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~E~~~v~~~~~~a~~~~~~~~~~g~~vh  291 (399)
                      ....+++.|++.|+++.+|+......          .+                ...+..++...          |.. -
T Consensus       202 ~~~~~f~~ar~~gl~it~HaGE~~~~----------~~----------------~~~i~~ai~~l----------~~~-R  244 (357)
T d2amxa1         202 DHKDVYHSVRDHGLHLTVHAGEDATL----------PN----------------LNTLYTAINIL----------NVE-R  244 (357)
T ss_dssp             GGHHHHHHHHHTTCEEEEEESCCTTC----------SS----------------SHHHHHHHHTS----------CCS-E
T ss_pred             hhHHHHHHHHhcCCcccccccccCCC----------CC----------------hHHHHHHHHcc----------CCc-c
Confidence            36778999999999999999432110          00                01233333322          222 4


Q ss_pred             EEcCCChhHHHHHHHHHHHCCCCEEEEccccccccccccCCCCCcceEEcCCCCChhhHHHHHHHHhcCCccEEeCCC
Q 015826          292 IVHLSDASSSLDLLMEAKTNGDSITVETCPHYLAFSAEEIPDGDTRFKCAPPIRDAANKEKLWEALMDGHIDMLSSDH  369 (399)
Q Consensus       292 i~H~s~~~~~l~~i~~ak~~G~~vt~e~~p~~L~~~~~~~~~~~~~~~~~Pplr~~~~~~~l~~~l~~G~id~i~sdh  369 (399)
                      |.|.....+.-++++..++++  |.+|+||..=...           +..|.++.-    .+.+.++.|+.-+|+||.
T Consensus       245 IgHGv~~~~d~~l~~~l~~~~--I~leiCPtSN~~~-----------~~~~~~~~H----P~~~l~~~Gv~v~l~TDD  305 (357)
T d2amxa1         245 IGHGIRVSESDELIELVKKKD--ILLEVCPISNLLL-----------NNVKSMDTH----PIRKLYDAGVKVSVNSDD  305 (357)
T ss_dssp             EEECGGGGGCHHHHHHHHHHT--CEEEECHHHHHHT-----------TSSSCSTTC----THHHHHHTTCEEEECCBC
T ss_pred             cccchheecCHHHHHHHHHhC--ceEEECCcchhhh-----------ccCCCcccC----HHHHHHHCCCeEEEeCCC
Confidence            778654212334555556654  6677888421110           112222221    245567779999999996

>d1qtwa_ c.1.15.1 (A:) Endonuclease IV {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: Xylose isomerase-like
family: Endonuclease IV
domain: Endonuclease IV
species: Escherichia coli [TaxId: 562]

Probab=81.23  E-value=12  Score=30.81  Aligned_cols=120  Identities=14%  Similarity=0.060  Sum_probs=70.5

Q ss_pred             hHHHHHHHHHcCCcEEEEeecCCCCCCCCCCCHHHHHHHHHHHHhcCCC---EEEecCChhhchhHHhhccCcCCchhhh
Q 015826          178 NASALEALLNAGVLGLKSFMCPSGINDFPMTNASHIKEGLSVLARYKRP---LLVHAEMEKGSERHVKLEDDTLDTRSYS  254 (399)
Q Consensus       178 ~~~~l~~l~~~G~~~ik~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~---v~~H~~~~~~~~~~~~~~~~~~~~~~~~  254 (399)
                      ..+.+++..+.|.+++.+|+..+-.-..+..+++..+++.+.++++|+.   +.+|+......                 
T Consensus        14 l~~a~~~a~e~G~~~ieif~~~P~~w~~~~~~~~~~~~~k~~~~~~gl~~~~~~~~~p~~~n~-----------------   76 (285)
T d1qtwa_          14 LANAAIRAAEIDATAFALFTKNQRQWRAAPLTTQTIDEFKAACEKYHYTSAQILPHDSYLINL-----------------   76 (285)
T ss_dssp             HHHHHHHHHHTTCSEEECCSSCSSCSSCCCCCHHHHHHHHHHHHHTTCCGGGBCCBCCTTCCT-----------------
T ss_pred             HHHHHHHHHHcCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHcCCCcceeEecCCccccc-----------------
Confidence            3456777888999999987643211112346788899999999999984   66675321100                 


Q ss_pred             cCCCCCChHH--HHHHHHHHHHHHhhhccCCCCCCceEEEEcCCCh------hHHHHHH----HH--HHHCCCCEEEEcc
Q 015826          255 TYLKTRPPSW--EEAAIRELLTVAKDTRTDGPAEGAHLHIVHLSDA------SSSLDLL----ME--AKTNGDSITVETC  320 (399)
Q Consensus       255 ~~~~~~p~~~--E~~~v~~~~~~a~~~~~~~~~~g~~vhi~H~s~~------~~~l~~i----~~--ak~~G~~vt~e~~  320 (399)
                        ....+...  -...+.+.++++++.       |++..+.|....      .+.++.+    +.  ....|+.+..|..
T Consensus        77 --~~~~~~~r~~s~~~~~~~i~~a~~l-------G~~~vv~h~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~le~~  147 (285)
T d1qtwa_          77 --GHPVTEALEKSRDAFIDEMQRCEQL-------GLSLLNFHPGSHLMQISEEDCLARIAESINIALDKTQGVTAVIENT  147 (285)
T ss_dssp             --TCSSHHHHHHHHHHHHHHHHHHHHT-------TCCEEEECCCBCTTTSCHHHHHHHHHHHHHHHHHHCSSCEEEEECC
T ss_pred             --ccchHHHHHHHHHHHHHHHHHHHHc-------CCCceeeeceeccCcccHHHHHHHHHHHHHHHHHhccCCeEEEeec
Confidence              00011111  123466778888875       888889996421      1222222    11  2356778888877


Q ss_pred             ccc
Q 015826          321 PHY  323 (399)
Q Consensus       321 p~~  323 (399)
                      |++
T Consensus       148 ~~~  150 (285)
T d1qtwa_         148 AGQ  150 (285)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            754