Citrus Sinensis ID: 015832

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
MSCSVAVSNSPVFSPSSSLFCNKTSVISQSPEKTLNLPLTHVKFSPSSSLSPTSPSPSSPLRFRLQKPPTGLSSSSSAACSSSSSSSPSALATGSGTASQQQTILKRKRPAKLDIPVASMSFGGLVTPREVKRDEVEDERDGFYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLGRYL
cccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEEEEccccccccEEEEEccccccccccEEEEEcccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccEEEEEEccccEEEEEEccEEEccccccccccHHHHHHHHHcccEEEEccccEEEccEEEEHHccccccccccccccccEEEEEEcccccEEEEEcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccccEEEEEEccccc
cccEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEccccccccHHHHEEEEEcccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEccEEEEEEcccccEEEEEccEEEEcccccccccHHHHHHHHHcccEEEEEcccccEccEEEEEHHHccHHHHcEEcccccEEEEEcccccEEEEEEcccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccccccEEEEEEEEcccc
mscsvavsnspvfspssslfcnktsvisqspektlnlplthvkfspssslsptspspssplrfrlqkpptglsssssaacssssssspsalatgsgtasQQQTILkrkrpakldipvasmsfgglvtprevkrdevederdgfYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGifdghggaKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKrgylntdseflkedvyggsCCVTALiqngtlvvsnagdcravmsrgglaealtsdhrpsredeksrietMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIiaepetkiirikpEYEFLILASDglwdkvsnqEAIDIarpfcqsidapepmlACKKLVDlsvsrgsvdDVSVMLIQLGRYL
mscsvavsnspvfspssslFCNKTSVISQSPEKTLNLPLTHVKfspssslsptspspssPLRFRLQKPPTGLSSSSSAACSSSSSSSPSALATGSGTASQQQTILkrkrpakldipvasmsfgglvtprevkrdevederdgfysvyckrgrrEAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGglaealtsdhrpsredeksrIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKqwiiaepetkiiriKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDlsvsrgsvddVSVMLIQLGRYL
MSCsvavsnspvfspsssLFCNKTSVISQSPEKTLNLPLTHVKFspssslsptspspssplRFRLQKpptglsssssaacssssssspsalatgsgtasQQQTILKRKRPAKLDIPVASMSFGGLVTPrevkrdevederdGFYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLvdlsvsrgsvddvsvMLIQLGRYL
*************************************************************************************************************************FGGLV**************DGFYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVMS************************TMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLG***
***S***SNSPVFS******************************************************************************************************************************DGFYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSID**EPMLACKKLVDLSVSRGSVDDVSVMLIQLGRYL
**************PSSSLFCNKTSVISQSPEKTLNLPLTHVK****************************************************************KRPAKLDIPVASMSFGGLVTPREVKRDEVEDERDGFYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAE****************IETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLGRYL
*SC********V*****S****************************************************************************************************SM******************ERDGFYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLGRY*
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSCSVAVSNSPVFSPSSSLFCNKTSVISQSPEKTLNLPLTHVKFSPSSSLSPTSPSPSSPLRFRLQKPPTGLSSSSSAACSSSSSSSPSALATGSGTASQQQTILKRKRPAKLDIPVASMSFGGLVTPREVKRDEVEDERDGFYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLGRYL
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query399 2.2.26 [Sep-21-2011]
O80871396 Probable protein phosphat yes no 0.962 0.969 0.605 1e-130
Q8RX37380 Probable protein phosphat no no 0.924 0.971 0.634 1e-128
Q9XEE8390 Probable protein phosphat no no 0.902 0.923 0.530 1e-104
Q10MX1391 Probable protein phosphat yes no 0.726 0.741 0.556 5e-89
Q9SUF4212 Putative protein phosphat no no 0.528 0.995 0.555 3e-68
Q9FXE4445 Probable protein phosphat no no 0.581 0.521 0.477 3e-68
Q53Q11397 Probable protein phosphat no no 0.897 0.901 0.38 2e-60
Q3EAZ3245 Putative protein phosphat no no 0.471 0.767 0.520 3e-60
Q2QWE3421 Probable protein phosphat no no 0.651 0.617 0.447 1e-58
Q67UX7348 Probable protein phosphat no no 0.606 0.695 0.433 1e-51
>sp|O80871|P2C25_ARATH Probable protein phosphatase 2C 25 OS=Arabidopsis thaliana GN=At2g30020 PE=1 SV=1 Back     alignment and function desciption
 Score =  465 bits (1196), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/411 (60%), Positives = 298/411 (72%), Gaps = 27/411 (6%)

Query: 1   MSCSVAVSNSPVFSPSSSLFCNKTSVISQSPEKTLNLPLTHVK--FSPSSSLSPTSPSPS 58
           MSCSVAV NSPVFSPSSSLFCNK+S++S SP+++L+L L+H K   S  SS S T  SP 
Sbjct: 1   MSCSVAVCNSPVFSPSSSLFCNKSSILS-SPQESLSLTLSHRKPQTSSPSSPSTTVSSPK 59

Query: 59  SPLRFRLQKPPTGLSSSSSAACSSSSSSSPSALATGSGTASQQQT---ILKRKRPAKLDI 115
           SP R R QKPP+G +              P  L+ GS + S       +LKRKRP +LDI
Sbjct: 60  SPFRLRFQKPPSGFA--------------PGPLSFGSESVSASSPPGGVLKRKRPTRLDI 105

Query: 116 P------VASMSFGGLVTPREVKRDEVEDERDGFYSVYCKRGRREAMEDRFSALVDFQGH 169
           P      VA +S    V     +     +     YSVYCKRGRREAMEDRFSA+ +  G 
Sbjct: 106 PIGVAGFVAPISSSAAVAATPREECREVEREGDGYSVYCKRGRREAMEDRFSAITNLHGD 165

Query: 170 SKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKE 229
            KQA+FG++DGHGG KAAEFAA+NLDKNI+EEV+ +  E +I +AVK GYL TD+ FLKE
Sbjct: 166 RKQAIFGVYDGHGGVKAAEFAAKNLDKNIVEEVVGKRDESEIAEAVKHGYLATDASFLKE 225

Query: 230 -DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGG 288
            DV GGSCCVTAL+  G LVVSNAGDCRAVMS GG+A+AL+SDHRPSR+DE+ RIET GG
Sbjct: 226 EDVKGGSCCVTALVNEGNLVVSNAGDCRAVMSVGGVAKALSSDHRPSRDDERKRIETTGG 285

Query: 289 YVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVS 348
           YVD  HG WR+QGSLAVSR +GD  LK+W+IAEPETKI RI+ ++EFLILASDGLWDKVS
Sbjct: 286 YVDTFHGVWRIQGSLAVSRGIGDAQLKKWVIAEPETKISRIEHDHEFLILASDGLWDKVS 345

Query: 349 NQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLGRYL 399
           NQEA+DIARP C   + P  + ACKKLVDLS SRGS DD+SVMLI L +++
Sbjct: 346 NQEAVDIARPLCLGTEKPLLLAACKKLVDLSASRGSSDDISVMLIPLRQFI 396
Protein phosphatase that negatively regulates defense respones. Inactivates MPK4 and MPK6 MAP kinases involved in stress and defense signaling.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|Q8RX37|P2C02_ARATH Probable protein phosphatase 2C 2 OS=Arabidopsis thaliana GN=At1g07160 PE=2 SV=1 Back     alignment and function description
>sp|Q9XEE8|P2C30_ARATH Probable protein phosphatase 2C 30 OS=Arabidopsis thaliana GN=PP2C5 PE=2 SV=1 Back     alignment and function description
>sp|Q10MX1|P2C32_ORYSJ Probable protein phosphatase 2C 32 OS=Oryza sativa subsp. japonica GN=Os03g0292100 PE=2 SV=1 Back     alignment and function description
>sp|Q9SUF4|P2C53_ARATH Putative protein phosphatase 2C 53 OS=Arabidopsis thaliana GN=At4g08260 PE=5 SV=1 Back     alignment and function description
>sp|Q9FXE4|P2C14_ARATH Probable protein phosphatase 2C 14 OS=Arabidopsis thaliana GN=At1g67820 PE=2 SV=2 Back     alignment and function description
>sp|Q53Q11|P2C74_ORYSJ Probable protein phosphatase 2C 74 OS=Oryza sativa subsp. japonica GN=Os11g0242200 PE=2 SV=1 Back     alignment and function description
>sp|Q3EAZ3|P2C45_ARATH Putative protein phosphatase 2C-like protein 45 OS=Arabidopsis thaliana GN=At3g27140 PE=5 SV=1 Back     alignment and function description
>sp|Q2QWE3|P2C77_ORYSJ Probable protein phosphatase 2C 77 OS=Oryza sativa subsp. japonica GN=Os12g0198200 PE=2 SV=1 Back     alignment and function description
>sp|Q67UX7|P2C10_ORYSJ Probable protein phosphatase 2C 10 OS=Oryza sativa subsp. japonica GN=Os02g0149800 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query399
224105941383 predicted protein [Populus trichocarpa] 0.952 0.992 0.676 1e-144
225434544381 PREDICTED: probable protein phosphatase 0.954 1.0 0.679 1e-142
224055331392 predicted protein [Populus trichocarpa] 0.954 0.971 0.663 1e-141
255560357376 protein phosphatase 2c, putative [Ricinu 0.937 0.994 0.660 1e-137
357490877378 Protein phosphatase 2C [Medicago truncat 0.932 0.984 0.614 1e-135
2582800381 protein phosphatase 2C [Medicago sativa] 0.932 0.976 0.612 1e-134
147778641316 hypothetical protein VITISV_012222 [Viti 0.731 0.924 0.761 1e-132
312282313395 unnamed protein product [Thellungiella h 0.957 0.967 0.623 1e-130
356500878389 PREDICTED: probable protein phosphatase 0.952 0.976 0.639 1e-130
297822723397 hypothetical protein ARALYDRAFT_481911 [ 0.964 0.969 0.608 1e-129
>gi|224105941|ref|XP_002313987.1| predicted protein [Populus trichocarpa] gi|222850395|gb|EEE87942.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  516 bits (1330), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 272/402 (67%), Positives = 317/402 (78%), Gaps = 22/402 (5%)

Query: 1   MSCSVAVSNSPVFSPSSSLFCNKTSV-ISQSPEKTLNLPLTHVKFSPSSSLSPTSPSPSS 59
           MSCSVAVSNSPVFSPS++LF +KT V I   P +T+ L LTH K +  S  S T+   S 
Sbjct: 1   MSCSVAVSNSPVFSPSTTLFRSKTVVSIPSPPAETIALTLTHSKPTTQSPSSSTTSCSSP 60

Query: 60  P-LRFRLQKPPTGLSSSSSAACSSSSSSSPSALATGSGTASQQQTILKRKRPAKLDIPVA 118
              R+RLQKP TG +SSSS A  S +++                T+LKRKRP +LDIPV 
Sbjct: 61  SPFRYRLQKPLTGFNSSSSLASGSGAAA----------------TLLKRKRPTRLDIPVV 104

Query: 119 SMSFGGLVTPREVKRDEVEDERDGF-YSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGI 177
               GGL TPREV+  E+E  R+G+ YSVYCKRGRREAMEDRFSA+VD +G +KQA F I
Sbjct: 105 MGFGGGLATPREVEGAELE--REGYGYSVYCKRGRREAMEDRFSAVVDLEGDAKQAFFAI 162

Query: 178 FDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRGYLNTDSEFLKEDVYGGSCC 237
           FDGHGGAKAAEFAA NL+KNIL+EV RRD ED I+DAVK GYLNTD++FLKED+ GGSCC
Sbjct: 163 FDGHGGAKAAEFAAGNLEKNILDEVARRDEED-IKDAVKYGYLNTDAQFLKEDIRGGSCC 221

Query: 238 VTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTW 297
           VTALI+ G LVVSNAGDCRAVMSRGG+AEALT+DHRPSREDEK RIE+MGGYVDL HGTW
Sbjct: 222 VTALIRKGNLVVSNAGDCRAVMSRGGVAEALTADHRPSREDEKDRIESMGGYVDLIHGTW 281

Query: 298 RVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIAR 357
           R+QGSLAVSR +GD HLKQW+IAEP+T ++RIKP++EFLILASDGLWDKV NQEA+DIAR
Sbjct: 282 RIQGSLAVSRGIGDNHLKQWVIAEPDTSVVRIKPDHEFLILASDGLWDKVGNQEAVDIAR 341

Query: 358 PFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLGRYL 399
             C  ++  EP+ ACKKL DLSV RGS DD+SVMLIQLGRY+
Sbjct: 342 RLCLGVEKAEPLSACKKLADLSVLRGSCDDISVMLIQLGRYV 383

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|225434544|ref|XP_002276936.1| PREDICTED: probable protein phosphatase 2C 25 isoform 1 [Vitis vinifera] Back     alignment and taxonomy information
>gi|224055331|ref|XP_002298484.1| predicted protein [Populus trichocarpa] gi|222845742|gb|EEE83289.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|255560357|ref|XP_002521194.1| protein phosphatase 2c, putative [Ricinus communis] gi|223539608|gb|EEF41194.1| protein phosphatase 2c, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357490877|ref|XP_003615726.1| Protein phosphatase 2C [Medicago truncatula] gi|355517061|gb|AES98684.1| Protein phosphatase 2C [Medicago truncatula] Back     alignment and taxonomy information
>gi|2582800|emb|CAA72341.1| protein phosphatase 2C [Medicago sativa] Back     alignment and taxonomy information
>gi|147778641|emb|CAN71723.1| hypothetical protein VITISV_012222 [Vitis vinifera] Back     alignment and taxonomy information
>gi|312282313|dbj|BAJ34022.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information
>gi|356500878|ref|XP_003519257.1| PREDICTED: probable protein phosphatase 2C 25-like [Glycine max] Back     alignment and taxonomy information
>gi|297822723|ref|XP_002879244.1| hypothetical protein ARALYDRAFT_481911 [Arabidopsis lyrata subsp. lyrata] gi|297325083|gb|EFH55503.1| hypothetical protein ARALYDRAFT_481911 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query399
TAIR|locus:2045678396 AT2G30020 [Arabidopsis thalian 0.741 0.747 0.610 4.1e-100
TAIR|locus:2007327380 AT1G07160 [Arabidopsis thalian 0.734 0.771 0.629 3.8e-94
TAIR|locus:2065046390 PP2C5 "phosphatase 2C5" [Arabi 0.746 0.764 0.552 4.9e-85
TAIR|locus:2008545445 AT1G67820 [Arabidopsis thalian 0.614 0.550 0.501 4.8e-66
TAIR|locus:2132497212 AT4G08260 [Arabidopsis thalian 0.408 0.768 0.516 3.8e-56
TAIR|locus:2044948193 AT2G05050 [Arabidopsis thalian 0.258 0.533 0.553 4.1e-45
TAIR|locus:2124784311 WIN2 "HOPW1-1-interacting 2" [ 0.541 0.694 0.447 1e-43
TAIR|locus:2183695354 AT5G10740 [Arabidopsis thalian 0.556 0.627 0.444 2.2e-43
TAIR|locus:2149363 447 AT5G24940 [Arabidopsis thalian 0.556 0.496 0.436 4.5e-43
TAIR|locus:2163781420 AT5G53140 [Arabidopsis thalian 0.546 0.519 0.429 9.6e-41
TAIR|locus:2045678 AT2G30020 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 932 (333.1 bits), Expect = 4.1e-100, Sum P(2) = 4.1e-100
 Identities = 185/303 (61%), Positives = 219/303 (72%)

Query:   104 ILKRKRPAKLDIP------VASMSFGGLVTPXXXXXXXXXXXXXGFYSVYCKRGRREAME 157
             +LKRKRP +LDIP      VA +S    V                 YSVYCKRGRREAME
Sbjct:    94 VLKRKRPTRLDIPIGVAGFVAPISSSAAVAATPREECREVEREGDGYSVYCKRGRREAME 153

Query:   158 DRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKR 217
             DRFSA+ +  G  KQA+FG++DGHGG KAAEFAA+NLDKNI+EEV+ +  E +I +AVK 
Sbjct:   154 DRFSAITNLHGDRKQAIFGVYDGHGGVKAAEFAAKNLDKNIVEEVVGKRDESEIAEAVKH 213

Query:   218 GYLNTDSEFLKE-DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSR 276
             GYL TD+ FLKE DV GGSCCVTAL+  G LVVSNAGDCRAVMS GG+A+AL+SDHRPSR
Sbjct:   214 GYLATDASFLKEEDVKGGSCCVTALVNEGNLVVSNAGDCRAVMSVGGVAKALSSDHRPSR 273

Query:   277 EDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFL 336
             +DE+ RIET GGYVD  HG WR+QGSLAVSR +GD  LK+W+IAEPETKI RI+ ++EFL
Sbjct:   274 DDERKRIETTGGYVDTFHGVWRIQGSLAVSRGIGDAQLKKWVIAEPETKISRIEHDHEFL 333

Query:   337 ILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLXXXXXXXXXXXXXXXMLIQLG 396
             ILASDGLWDKVSNQEA+DIARP C   + P  + ACKKL               MLI L 
Sbjct:   334 ILASDGLWDKVSNQEAVDIARPLCLGTEKPLLLAACKKLVDLSASRGSSDDISVMLIPLR 393

Query:   397 RYL 399
             +++
Sbjct:   394 QFI 396
GO:0003824 "catalytic activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS;IDA
GO:0006470 "protein dephosphorylation" evidence=IEA
GO:0008287 "protein serine/threonine phosphatase complex" evidence=IEA
GO:0009611 "response to wounding" evidence=IEP
GO:0009620 "response to fungus" evidence=IEP
GO:0050832 "defense response to fungus" evidence=IMP
GO:0009536 "plastid" evidence=IDA
GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP
TAIR|locus:2007327 AT1G07160 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2065046 PP2C5 "phosphatase 2C5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2008545 AT1G67820 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2132497 AT4G08260 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2044948 AT2G05050 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2124784 WIN2 "HOPW1-1-interacting 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2183695 AT5G10740 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2149363 AT5G24940 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2163781 AT5G53140 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q10MX1P2C32_ORYSJ3, ., 1, ., 3, ., 1, 60.55660.72680.7416yesno
O80871P2C25_ARATH3, ., 1, ., 3, ., 1, 60.60580.96240.9696yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pg.C_LG_IX000882
hypothetical protein (383 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 4e-94
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 4e-87
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 2e-76
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 5e-48
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 8e-47
PTZ00224 381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 6e-33
smart00331193 smart00331, PP2C_SIG, Sigma factor PP2C-like phosp 9e-05
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information 
 Score =  282 bits (723), Expect = 4e-94
 Identities = 106/261 (40%), Positives = 154/261 (59%), Gaps = 16/261 (6%)

Query: 143 FYSVYCKRGRREAMEDRFSALVDFQGHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEV 202
              V  K G R+  ED      +        +FG+FDGHGG  A EFA++ L + +LEE+
Sbjct: 2   SAGVSDKGGDRKTNEDAVVIKPNLNNED-GGLFGVFDGHGGHAAGEFASKLLVEELLEEL 60

Query: 203 LRRDI--EDQIEDAVKRGYLNTDSEFLK------EDVYGGSCCVTALIQNGTLVVSNAGD 254
                  E+ IE+A+++ +L  D E L+      +D   G+  V ALI+   L V+N GD
Sbjct: 61  EETLTLSEEDIEEALRKAFLRADEEILEEAQDEPDDARSGTTAVVALIRGNKLYVANVGD 120

Query: 255 CRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHL 314
            RAV+ R G A  LT DH+P  E+E+ RIE  GG V       RV G LAV+RALGD  L
Sbjct: 121 SRAVLCRNGEAVQLTKDHKPVNEEERERIEKAGGRVSN----GRVPGVLAVTRALGDFDL 176

Query: 315 KQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLACKK 374
           K  + AEP+  ++++  + +FLILASDGLWD +SNQEA+DI R     +   +   A ++
Sbjct: 177 KPGVSAEPDVTVVKLTEDDDFLILASDGLWDVLSNQEAVDIVR---SELAKEDLQEAAQE 233

Query: 375 LVDLSVSRGSVDDVSVMLIQL 395
           LVDL++ RGS D+++V++++L
Sbjct: 234 LVDLALRRGSHDNITVVVVRL 254

Length = 254
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information
>gnl|CDD|214624 smart00331, PP2C_SIG, Sigma factor PP2C-like phosphatases Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 399
KOG0698330 consensus Serine/threonine protein phosphatase [Si 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0697379 consensus Protein phosphatase 1B (formerly 2C) [Si 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
PTZ00224 381 protein phosphatase 2C; Provisional 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0699542 consensus Serine/threonine protein phosphatase [Si 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
KOG0700390 consensus Protein phosphatase 2C/pyruvate dehydrog 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323493 consensus Serine/threonine phosphatase [Signal tra 99.97
KOG0618 1081 consensus Serine/threonine phosphatase 2C containi 99.92
KOG1379330 consensus Serine/threonine protein phosphatase [Si 99.89
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.85
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.76
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.65
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.51
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.34
KOG02601605 consensus RNA polymerase II, large subunit [Transc 86.16
PRK10693303 response regulator of RpoS; Provisional 81.53
>KOG0698 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information 
Probab=100.00  E-value=3e-51  Score=404.17  Aligned_cols=253  Identities=51%  Similarity=0.797  Sum_probs=230.2

Q ss_pred             EEEeecCcCCCCCCccEEEecccC----CCC-cceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcChhHHHHHHHHHH
Q 015832          144 YSVYCKRGRREAMEDRFSALVDFQ----GHS-KQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRDIEDQIEDAVKRG  218 (399)
Q Consensus       144 ~~~~s~~G~R~~neD~~~~~~~~~----g~~-~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~~~~~i~~~l~~a  218 (399)
                      .+.++.+|+|..|||++....++.    +.. ...||||||||||..+|+|+.++|+..+.++.........++++++++
T Consensus        42 ~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~~~A~~~~~~L~~~l~~~~~~~~~~~~~~~a~~~~  121 (330)
T KOG0698|consen   42 GSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGDLAAKFAAKHLHKNLLEQLAFPKDRQDVKDALRRA  121 (330)
T ss_pred             eEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCHHHHHHHHHHHHHHHHhhhhcccchHHHHHHHHHH
Confidence            567799999999999999887744    333 689999999999999999999999999999887665335799999999


Q ss_pred             HH-ccchhhhhc---cccCCceeEEEEEECC-eEEEEEeccccEEEEeCC-eeEEcCCCCCCCCHHHHHHHHHcCCceec
Q 015832          219 YL-NTDSEFLKE---DVYGGSCCVTALIQNG-TLVVSNAGDCRAVMSRGG-LAEALTSDHRPSREDEKSRIETMGGYVDL  292 (399)
Q Consensus       219 ~~-~~~~~l~~~---~~~~GtT~v~~li~~~-~l~vAnvGDsRa~l~r~g-~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~  292 (399)
                      |. .+|.++.+.   ...+|+|++++++.++ +|||||+|||||+|++.| ++++||.||+|.+++|+.||+.+||+|..
T Consensus       122 F~~~~D~~~~~~~~~~~~~gstav~~vi~~~~~l~vaN~GDSRaVl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~  201 (330)
T KOG0698|consen  122 FLTKTDSEFLEKREDNRSGGSTAVVALIKKGRKLYVANVGDSRAVLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSN  201 (330)
T ss_pred             HHHHHHHHHHhhccCCCCCcceeeeeeEecCCEEEEEEcCCCcEEEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEE
Confidence            99 699999986   5678999988888866 999999999999999865 89999999999999999999999999998


Q ss_pred             cCCcccccCCccccccccccccc-cceeeeeeEEEEEecCCCeEEEEECCccCCCCCHHHHHHHHhccccCCCCCCHHHH
Q 015832          293 CHGTWRVQGSLAVSRALGDRHLK-QWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQSIDAPEPMLA  371 (399)
Q Consensus       293 ~~~~~r~~g~lavsRalGd~~~k-~~v~~~Pdi~~~~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~~~~~~~~~~a  371 (399)
                      ..+.||+.|.|+++|+|||..+| ++|+++||+....+..+++||||+||||||++++||++++++..+  .....+..+
T Consensus       202 ~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deFLiLasDGiwDv~s~qeav~~V~~~~--~~~~~~~~a  279 (330)
T KOG0698|consen  202 WGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEFLILASDGIWDVVSNQEAVDLVRDEL--ASISSPLAA  279 (330)
T ss_pred             cCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcEEEEeCCchhcccChHHHHHHHHHHh--hccccHHHH
Confidence            88899999999999999999999 889999999999999989999999999999999999999999844  235689999


Q ss_pred             HHHHHHHHHhCCCCCCeEEEEEEeCCC
Q 015832          372 CKKLVDLSVSRGSVDDVSVMLIQLGRY  398 (399)
Q Consensus       372 a~~Lv~~A~~~gs~DNiTvIvi~l~~~  398 (399)
                      ++.|.+.++.+|+.||||||||.|...
T Consensus       280 ~~~l~~~a~~~~s~DnitvvvV~l~~~  306 (330)
T KOG0698|consen  280 AKLLATEALSRGSKDNITVVVVRLKSS  306 (330)
T ss_pred             HHHHHHHHhhcCCCCCeEEEEEEecCc
Confidence            999999999999999999999999764

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0697 consensus Protein phosphatase 1B (formerly 2C) [Signal transduction mechanisms] Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0699 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>KOG0700 consensus Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323 consensus Serine/threonine phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms] Back     alignment and domain information
>KOG1379 consensus Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information
>KOG0260 consensus RNA polymerase II, large subunit [Transcription] Back     alignment and domain information
>PRK10693 response regulator of RpoS; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 5e-34
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 8e-33
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 9e-33
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 9e-33
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 9e-33
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 9e-33
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 1e-32
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 2e-32
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 2e-32
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 2e-32
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 4e-26
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 4e-26
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 6e-24
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 1e-23
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 1e-23
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 2e-23
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 2e-21
2isn_A364 Crystal Structure Of A Phosphatase From A Pathogeni 2e-07
2pop_A353 The Crystal Structure Of Tab1 And Bir1 Complex Leng 2e-07
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 6e-07
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 7e-07
2j4o_A401 Structure Of Tab1 Length = 401 2e-05
2pom_A372 Tab1 With Manganese Ion Length = 372 2e-05
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure 
Iteration: 1

 Score =  141 bits (356), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/245 (37%), Positives = 133/245 (54%), Gaps = 33/245 (13%)
Query: 143 FYSVYCKRGRREAMED------RF-----SALVD------FQGHSKQAVFGIFDGHGGAK 185
            Y V    GRR  MED      RF     S+L+D      F  H     FG++DGHGG++
Sbjct: 13  LYGVTSICGRRPEMEDSVSTIPRFLQVSSSSLLDGRVTNGFNPHLSAHFFGVYDGHGGSQ 72
Query: 186 AAEFAAENLDKNILEEVLRRDIE--------DQIEDAVKRGYLNTDSEF-----LKEDVY 232
            A +  E +   + EE+++   E        ++ + A+   ++  DSE        E V 
Sbjct: 73  VANYCRERMHLALTEEIVKEKPEFCDGDTWQEKWKKALFNSFMRVDSEIETVAHAPETV- 131
Query: 233 GGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDL 292
            GS  V A++    + V+N GD RAV+ RG    AL+ DH+P R+DE +RIE  GG V  
Sbjct: 132 -GSTSVVAVVFPTHIFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIR 190
Query: 293 CHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEA 352
            +G  RV G LA+SR++GDR+LK  +I +PE   +R   E + LILASDGLWD ++N+E 
Sbjct: 191 WNGA-RVFGVLAMSRSIGDRYLKPSVIPDPEVTSVRRVKEDDCLILASDGLWDVMTNEEV 249
Query: 353 IDIAR 357
            D+AR
Sbjct: 250 CDLAR 254
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure
>pdb|2ISN|A Chain A, Crystal Structure Of A Phosphatase From A Pathogenic Strain Toxoplasma Gondii Length = 364 Back     alignment and structure
>pdb|2POP|A Chain A, The Crystal Structure Of Tab1 And Bir1 Complex Length = 353 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2J4O|A Chain A, Structure Of Tab1 Length = 401 Back     alignment and structure
>pdb|2POM|A Chain A, Tab1 With Manganese Ion Length = 372 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-108
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 1e-105
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 1e-103
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 1e-103
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 1e-102
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 1e-101
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 1e-101
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 1e-100
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 3e-87
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 3e-72
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 6e-72
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 1e-61
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 4e-40
2pnq_A 467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 8e-06
1txo_A237 Putative bacterial enzyme; serine/threonine protei 1e-18
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 3e-18
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 6e-18
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 2e-15
3rnr_A211 Stage II sporulation E family protein; structural 1e-11
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-06
3h0g_A1752 DNA-directed RNA polymerase II subunit RPB1; trans 4e-04
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
 Score =  319 bits (820), Expect = e-108
 Identities = 97/295 (32%), Positives = 145/295 (49%), Gaps = 44/295 (14%)

Query: 144 YSVYCKRGRREAMEDRFSALVDF-------------QGHSKQAVFGIFDGHGGAKAAEFA 190
           Y      GRR  MED  S +  F                S    FG++DGHGG++ A + 
Sbjct: 11  YGFTSICGRRPEMEDAVSTIPRFLQSSSGSMLDGRFDPQSAAHFFGVYDGHGGSQVANYC 70

Query: 191 AENLDKNILEEVLRRDIE--------DQIEDAVKRGYLNTDSEFLK-EDVYGGSCCVTAL 241
            E +   + EE+ +            ++ + A+   +L  DSE         GS  V A+
Sbjct: 71  RERMHLALAEEIAKEKPMLSDGDTWLEKWKKALFNSFLRVDSEIESVAPETVGSTSVVAV 130

Query: 242 IQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQG 301
           +    + V+N GD RAV+ RG  A  L+ DH+P REDE +RIE  GG V   +G  RV G
Sbjct: 131 VFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNG-ARVFG 189

Query: 302 SLAVSRALGDRHLKQWIIAEPETKIIRIKPEYEFLILASDGLWDKVSNQEAIDIAR---- 357
            LA+SR++GDR+LK  II +PE   ++   E + LILASDG+WD ++++EA ++AR    
Sbjct: 190 VLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRIL 249

Query: 358 -----------------PFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQL 395
                               +    P  M A + L  L++ RGS D++SV+++ L
Sbjct: 250 LWHKKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDL 304
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Length = 211 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query399
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.86
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.84
3f79_A255 Probable two-component response regulator; adaptor 99.74
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.7
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.29
3eq2_A394 Probable two-component response regulator; adaptor 98.57
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
Probab=100.00  E-value=2e-51  Score=405.81  Aligned_cols=264  Identities=39%  Similarity=0.551  Sum_probs=227.0

Q ss_pred             cceeecCCceEEEeecCcCCCCCCccEEEecccCC------------------CCcceEEEEEcCCCCchHHHHHHHHHH
Q 015832          134 DEVEDERDGFYSVYCKRGRREAMEDRFSALVDFQG------------------HSKQAVFGIFDGHGGAKAAEFAAENLD  195 (399)
Q Consensus       134 ~~~~~~~~~~~~~~s~~G~R~~neD~~~~~~~~~g------------------~~~~~~fgV~DGhGG~~~a~~as~~l~  195 (399)
                      ..++.+....||+++++|+|..|||++.+..++..                  ..+..||+|||||||+.++++|++.++
T Consensus         6 ~~~~~~~~~~~G~~s~~G~R~~nEDa~~~~~~~~~~p~~~~~~~~~g~~~~~~~~~~~l~~V~DGhGG~~~~~~as~~~~   85 (337)
T 3qn1_B            6 SVYELDCIPLWGTVSIQGNRSEMEDAFAVSPHFLKLPIKMLMGDHEGMSPSLTHLTGHFFGVYDGHGGHKVADYCRDRLH   85 (337)
T ss_dssp             -----CCSCCEEEEEECTTSSSCCEEEEEEEEEEEEEGGGTC----------CEEEEEEEEEEEEESSSHHHHHHHHHHH
T ss_pred             chhhhcccCceEEEEeeeCCchhhhHHHHHhhhhcccchhcccccccccccccCCCeEEEEEEeCCCChhHHHHHHHHHH
Confidence            33455555569999999999999999999766421                  125789999999999999999999999


Q ss_pred             HHHHHHHHhcCh-----------hHHHHHHHHHHHHccchhhhhcc-----------------ccCCceeEEEEEECCeE
Q 015832          196 KNILEEVLRRDI-----------EDQIEDAVKRGYLNTDSEFLKED-----------------VYGGSCCVTALIQNGTL  247 (399)
Q Consensus       196 ~~l~~~~~~~~~-----------~~~i~~~l~~a~~~~~~~l~~~~-----------------~~~GtT~v~~li~~~~l  247 (399)
                      +.|.+.+.....           ...++++|+++|..+|+++....                 ..+|||++++++.++++
T Consensus        86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l  165 (337)
T 3qn1_B           86 FALAEEIERIKDELCKRNTGEGRQVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHI  165 (337)
T ss_dssp             HHHHHHHHHTC------------CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEE
T ss_pred             HHHHHHHHhhhhhhhccccccchHHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEE
Confidence            999988764321           35789999999999999987643                 36799999999999999


Q ss_pred             EEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHHcCCceeccCCcccccCCccccccccccccccceeeeeeEEEE
Q 015832          248 VVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVDLCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKII  327 (399)
Q Consensus       248 ~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~~Gg~v~~~~~~~r~~g~lavsRalGd~~~k~~v~~~Pdi~~~  327 (399)
                      |+||+||||+|++|+|++++||+||++.++.|+.||...||++..+.+ +++.|.++++|+||+..+|+.++++|++..+
T Consensus       166 ~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~e~~ri~~~gg~v~~~~~-~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~  244 (337)
T 3qn1_B          166 VVSNCGDSRAVLFRGKEAMPLSVDHKPDREDEYARIENAGGKVIQWQG-ARVFGVLAMSRSIGDRYLKPYVIPEPEVTFM  244 (337)
T ss_dssp             EEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHHHHTTCCEEESSS-EEETTTBSCSBCEECGGGTTTSBCCCEEEEE
T ss_pred             EEEeccCcEEEEEeCCEeeeecCCCCCCCHHHHHHHHHcCCeEEecCC-ceecCccccccccccccccCCCCCcceEEEE
Confidence            999999999999999999999999999999999999999999986543 6899999999999999999999999999999


Q ss_pred             EecCCCeEEEEECCccCCCCCHHHHHHHHhcccc--------------CC-CCCCHHHHHHHHHHHHHhCCCCCCeEEEE
Q 015832          328 RIKPEYEFLILASDGLWDKVSNQEAIDIARPFCQ--------------SI-DAPEPMLACKKLVDLSVSRGSVDDVSVML  392 (399)
Q Consensus       328 ~l~~~~d~LILaSDGlwd~ls~~ei~~iv~~~~~--------------~~-~~~~~~~aa~~Lv~~A~~~gs~DNiTvIv  392 (399)
                      .+.+.+||||||||||||+++++|++++++..+.              +. ...+++.+|+.|+++|+++|+.|||||||
T Consensus       245 ~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTviv  324 (337)
T 3qn1_B          245 PRSREDECLILASDGLWDVMNNQEVCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIV  324 (337)
T ss_dssp             ECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEE
T ss_pred             EeCCCCCEEEEEecCcccCCCHHHHHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEE
Confidence            9977679999999999999999999999985210              00 12467899999999999999999999999


Q ss_pred             EEeCCC
Q 015832          393 IQLGRY  398 (399)
Q Consensus       393 i~l~~~  398 (399)
                      |+|+..
T Consensus       325 v~l~~~  330 (337)
T 3qn1_B          325 IDLKAQ  330 (337)
T ss_dssp             EECCSC
T ss_pred             EEecCC
Confidence            999753
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 399
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 2e-54
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 2e-33
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (456), Expect = 2e-54
 Identities = 85/294 (28%), Positives = 134/294 (45%), Gaps = 30/294 (10%)

Query: 125 LVTPREVKRDEVEDERDGF-YSVYCKRGRREAMEDRFSALVDF-QGHSKQAVFGIFDGHG 182
           L  P+  K +  + + +G  Y +   +G R  MED  +A++    G    + F ++DGH 
Sbjct: 4   LDKPKMEKHNA-QGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHA 62

Query: 183 GAKAAEFAAENLDKNILEEVLRR-----DIEDQIEDAVKRGYLNTDSEFLKEDV------ 231
           G++ A++  E+L  +I      +        + +++ ++ G+L  D              
Sbjct: 63  GSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGAD 122

Query: 232 YGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIETMGGYVD 291
             GS  V  LI        N GD R ++ R       T DH+PS   EK RI+  GG   
Sbjct: 123 RSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGS-- 180

Query: 292 LCHGTWRVQGSLAVSRALGDRHLKQWIIAEPETKIIRIKPEY----------EFLILASD 341
                 RV GSLAVSRALGD   K      P  +++  +PE           +F+ILA D
Sbjct: 181 --VMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACD 238

Query: 342 GLWDKVSNQEAIDIARPFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQL 395
           G+WD + N+E  D  R   +  D  +    C ++VD  + +GS D++SV+LI  
Sbjct: 239 GIWDVMGNEELCDFVRSRLEVTD--DLEKVCNEVVDTCLYKGSRDNMSVILICF 290
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query399
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-53  Score=409.56  Aligned_cols=253  Identities=33%  Similarity=0.528  Sum_probs=223.0

Q ss_pred             ecCCceEEEeecCcCCCCCCccEEEecccC-CCCcceEEEEEcCCCCchHHHHHHHHHHHHHHHHHHhcC-----hhHHH
Q 015832          138 DERDGFYSVYCKRGRREAMEDRFSALVDFQ-GHSKQAVFGIFDGHGGAKAAEFAAENLDKNILEEVLRRD-----IEDQI  211 (399)
Q Consensus       138 ~~~~~~~~~~s~~G~R~~neD~~~~~~~~~-g~~~~~~fgV~DGhGG~~~a~~as~~l~~~l~~~~~~~~-----~~~~i  211 (399)
                      .++.. ||+++++|+|..|||+|.+..++. +..+..||||||||||+.++++|++.+++.|.+......     ..+.+
T Consensus        18 ~~~~~-~g~~s~~G~R~~~ED~~~~~~~~~~~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~~   96 (295)
T d1a6qa2          18 GNGLR-YGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENV   96 (295)
T ss_dssp             ETTEE-EEEEEEEETSSSCCEEEEEEEEETTTEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHHH
T ss_pred             CCceE-EEEEeCccCCCcccCeeEEEcccCCCCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHHH
Confidence            34444 999999999999999999887764 335678999999999999999999999999987654321     25678


Q ss_pred             HHHHHHHHHccchhhhhc------cccCCceeEEEEEECCeEEEEEeccccEEEEeCCeeEEcCCCCCCCCHHHHHHHHH
Q 015832          212 EDAVKRGYLNTDSEFLKE------DVYGGSCCVTALIQNGTLVVSNAGDCRAVMSRGGLAEALTSDHRPSREDEKSRIET  285 (399)
Q Consensus       212 ~~~l~~a~~~~~~~l~~~------~~~~GtT~v~~li~~~~l~vAnvGDsRa~l~r~g~~~~LT~DH~~~~~~e~~Ri~~  285 (399)
                      .++|+++|..+++.+...      ...+|||+++++|.++++|+||+||||+|++|+|++++||.||++.++.|++||..
T Consensus        97 ~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E~~Ri~~  176 (295)
T d1a6qa2          97 KNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQN  176 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHHHhhHhh
Confidence            999999999999887543      34679999999999999999999999999999999999999999999999999999


Q ss_pred             cCCceeccCCcccccCCccccccccccccc---------cceeeeeeEEEEEecC-CCeEEEEECCccCCCCCHHHHHHH
Q 015832          286 MGGYVDLCHGTWRVQGSLAVSRALGDRHLK---------QWIIAEPETKIIRIKP-EYEFLILASDGLWDKVSNQEAIDI  355 (399)
Q Consensus       286 ~Gg~v~~~~~~~r~~g~lavsRalGd~~~k---------~~v~~~Pdi~~~~l~~-~~d~LILaSDGlwd~ls~~ei~~i  355 (399)
                      .||++...    |+.|.+++||+|||..+|         ++|+++|++..+.+.. +++|||||||||||+++++|++++
T Consensus       177 ~gg~v~~~----r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~  252 (295)
T d1a6qa2         177 AGGSVMIQ----RVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDF  252 (295)
T ss_dssp             TTCCEETT----EETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHH
T ss_pred             cCCccccc----ccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHHHH
Confidence            99999753    889999999999999987         4599999999999864 467999999999999999999999


Q ss_pred             HhccccCCCCCCHHHHHHHHHHHHHhCCCCCCeEEEEEEeCC
Q 015832          356 ARPFCQSIDAPEPMLACKKLVDLSVSRGSVDDVSVMLIQLGR  397 (399)
Q Consensus       356 v~~~~~~~~~~~~~~aa~~Lv~~A~~~gs~DNiTvIvi~l~~  397 (399)
                      +++.+..  ..+++.+|+.|++.|+++|+.||||||||+|+.
T Consensus       253 v~~~~~~--~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~  292 (295)
T d1a6qa2         253 VRSRLEV--TDDLEKVCNEVVDTCLYKGSRDNMSVILICFPN  292 (295)
T ss_dssp             HHHHHTT--CCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTT
T ss_pred             HHHHhhc--CCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccC
Confidence            9874332  468999999999999999999999999999975
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure