Citrus Sinensis ID: 015854

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVINQYLLPTMIRN
ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHcccccccEEEEccccccccccEEEEccccccEEEEEEcHHHHcccHHHHHHHHHHHcHHccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHcccccccccc
cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccHEEEEEEEHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccEEEEEEccccccccccEEEccccccEEEEEHHHHHcccccHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcc
MVFPYMEAVVGFMILMYFFETYLDLRQHAAlklpklpktlegviSQEKfeksrgysldkshfHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQltdlpfslYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLiaplfnkftplpegeLREKIEKLASSlkfplkklfvvdgstrsshsnaymygffknkRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTdlfrsfgfdtqpvLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVINQYllptmirn
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVInqyllptmirn
MVFPYMEAVVGFMILMYFFETYLDLRQHaalklpklpkTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVINQYLLPTMIRN
**FPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVINQYLLPTM***
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVINQYLLPTMIR*
MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVINQYLLPTMIRN
*VFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVINQYLLPTMIRN
oooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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ooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVINQYLLPTMIRN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query399 2.2.26 [Sep-21-2011]
Q8RX88424 CAAX prenyl protease 1 ho yes no 0.974 0.917 0.866 0.0
Q6EPN8425 CAAX prenyl protease 1 ho yes no 0.974 0.915 0.807 0.0
Q80W54475 CAAX prenyl protease 1 ho yes no 0.954 0.802 0.452 1e-91
O75844475 CAAX prenyl protease 1 ho yes no 0.954 0.802 0.454 5e-91
P47154453 CAAX prenyl protease 1 OS yes no 0.964 0.849 0.395 3e-70
Q10071474 Probable CAAX prenyl prot yes no 0.957 0.805 0.389 5e-70
Q54FH7426 CAAX prenyl protease 1 ho yes no 0.912 0.854 0.388 1e-66
P40769426 Uncharacterized metallopr yes no 0.513 0.481 0.266 3e-16
A1RT82347 Protease HtpX homolog OS= yes no 0.305 0.351 0.335 1e-06
Q8THH5286 Protease HtpX homolog 1 O yes no 0.438 0.611 0.295 3e-06
>sp|Q8RX88|FACE1_ARATH CAAX prenyl protease 1 homolog OS=Arabidopsis thaliana GN=FACE1 PE=1 SV=1 Back     alignment and function desciption
 Score =  695 bits (1793), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 337/389 (86%), Positives = 357/389 (91%)

Query: 1   MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKS 60
           M  P+ME VVGFMI+MY FETYLDLRQ  ALKLP LPKTL GVISQEKFEKSR YSLDKS
Sbjct: 1   MAIPFMETVVGFMIVMYIFETYLDLRQLTALKLPTLPKTLVGVISQEKFEKSRAYSLDKS 60

Query: 61  HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
           +FHFVHEFVTILMDSAIL F ILPWFWK SG  L  +GLD ENEILHTLSFLAGVM WSQ
Sbjct: 61  YFHFVHEFVTILMDSAILFFGILPWFWKMSGAVLPRLGLDPENEILHTLSFLAGVMTWSQ 120

Query: 121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
           +TDLPFSLYSTFVIE+RHGFNKQTIW+F RDMIKG  L+++LGPPIV+AII IVQKGGPY
Sbjct: 121 ITDLPFSLYSTFVIESRHGFNKQTIWMFIRDMIKGTFLSVILGPPIVAAIIFIVQKGGPY 180

Query: 181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
           LAIYLWAFMF+LSLVMMT+YPVLIAPLFNKFTPLP+G+LREKIEKLASSLKFPLKKLFVV
Sbjct: 181 LAIYLWAFMFILSLVMMTIYPVLIAPLFNKFTPLPDGDLREKIEKLASSLKFPLKKLFVV 240

Query: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300
           DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKN++EIVAVIAHELGHWKLNHT YSFIA
Sbjct: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNEDEIVAVIAHELGHWKLNHTTYSFIA 300

Query: 301 VQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRS 360
           VQ+L  LQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIP+QHLVSFGLNLVSR+
Sbjct: 301 VQILAFLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPLQHLVSFGLNLVSRA 360

Query: 361 FEFQADAFAKKLGYASALRAGLVKLQVIN 389
           FEFQADAFA KLGYA  LR  LVKLQ  N
Sbjct: 361 FEFQADAFAVKLGYAKDLRPALVKLQEEN 389
Proteolytically removes the C-terminal three residues of farnesylated proteins. The substrate specificity is only partially overlaping with that of FACE2.
Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 4EC: .EC: 2EC: 4EC: .EC: 8EC: 4
>sp|Q6EPN8|FACE1_ORYSJ CAAX prenyl protease 1 homolog OS=Oryza sativa subsp. japonica GN=FACE1 PE=2 SV=1 Back     alignment and function description
>sp|Q80W54|FACE1_MOUSE CAAX prenyl protease 1 homolog OS=Mus musculus GN=Zmpste24 PE=1 SV=2 Back     alignment and function description
>sp|O75844|FACE1_HUMAN CAAX prenyl protease 1 homolog OS=Homo sapiens GN=ZMPSTE24 PE=1 SV=2 Back     alignment and function description
>sp|P47154|STE24_YEAST CAAX prenyl protease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STE24 PE=1 SV=1 Back     alignment and function description
>sp|Q10071|STE24_SCHPO Probable CAAX prenyl protease 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3H1.05 PE=3 SV=1 Back     alignment and function description
>sp|Q54FH7|FACE1_DICDI CAAX prenyl protease 1 homolog OS=Dictyostelium discoideum GN=zmpste24 PE=3 SV=1 Back     alignment and function description
>sp|P40769|YHFN_BACSU Uncharacterized metalloprotease YhfN OS=Bacillus subtilis (strain 168) GN=yhfN PE=3 SV=2 Back     alignment and function description
>sp|A1RT82|HTPX_PYRIL Protease HtpX homolog OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=htpX PE=3 SV=1 Back     alignment and function description
>sp|Q8THH5|HTPX1_METAC Protease HtpX homolog 1 OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=htpX1 PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query399
224067924424 predicted protein [Populus trichocarpa] 0.974 0.917 0.917 0.0
255541686424 caax prenyl protease ste24, putative [Ri 0.974 0.917 0.902 0.0
224130374424 predicted protein [Populus trichocarpa] 0.974 0.917 0.912 0.0
449432124424 PREDICTED: CAAX prenyl protease 1 homolo 0.974 0.917 0.899 0.0
449480231424 PREDICTED: CAAX prenyl protease 1 homolo 0.974 0.917 0.897 0.0
225454328424 PREDICTED: CAAX prenyl protease 1 homolo 0.974 0.917 0.897 0.0
356568433424 PREDICTED: CAAX prenyl protease 1 homolo 0.974 0.917 0.863 0.0
357507535426 CAAX prenyl protease-like protein [Medic 0.974 0.913 0.856 0.0
356531957424 PREDICTED: CAAX prenyl protease 1 homolo 0.974 0.917 0.856 0.0
18411603424 CAAX prenyl protease 1-like protein [Ara 0.974 0.917 0.866 0.0
>gi|224067924|ref|XP_002302601.1| predicted protein [Populus trichocarpa] gi|222844327|gb|EEE81874.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 357/389 (91%), Positives = 374/389 (96%)

Query: 1   MVFPYMEAVVGFMILMYFFETYLDLRQHAALKLPKLPKTLEGVISQEKFEKSRGYSLDKS 60
           M FPYMEAVVGFMILMYFFETYLDLRQHAALKLP LPKTLEGVISQEKFEKSR YSLDKS
Sbjct: 1   MAFPYMEAVVGFMILMYFFETYLDLRQHAALKLPSLPKTLEGVISQEKFEKSRAYSLDKS 60

Query: 61  HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
           +F+FVHEFVTIL+DSAIL + ILPWFWKKSG+FLVLVGLD ENEI +TL+FLAGVM+WSQ
Sbjct: 61  YFNFVHEFVTILLDSAILFYAILPWFWKKSGSFLVLVGLDEENEIFNTLAFLAGVMIWSQ 120

Query: 121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
           +TDLPFSLYSTFVIEARHGFNKQT WLFFRD+ KG+ L+I+LGPPIVSAII+IVQKGGPY
Sbjct: 121 ITDLPFSLYSTFVIEARHGFNKQTTWLFFRDLFKGICLSILLGPPIVSAIILIVQKGGPY 180

Query: 181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
           LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLA SLKFPLKKLFVV
Sbjct: 181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLAFSLKFPLKKLFVV 240

Query: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300
           DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA
Sbjct: 241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300

Query: 301 VQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRS 360
           VQ+LT LQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIP+QHLVSFGLNLVSR+
Sbjct: 301 VQILTFLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPLQHLVSFGLNLVSRA 360

Query: 361 FEFQADAFAKKLGYASALRAGLVKLQVIN 389
           FEFQADAFAKKLGY SALRAGLVKLQ  N
Sbjct: 361 FEFQADAFAKKLGYGSALRAGLVKLQEEN 389

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255541686|ref|XP_002511907.1| caax prenyl protease ste24, putative [Ricinus communis] gi|223549087|gb|EEF50576.1| caax prenyl protease ste24, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224130374|ref|XP_002320821.1| predicted protein [Populus trichocarpa] gi|222861594|gb|EEE99136.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|449432124|ref|XP_004133850.1| PREDICTED: CAAX prenyl protease 1 homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|449480231|ref|XP_004155836.1| PREDICTED: CAAX prenyl protease 1 homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|225454328|ref|XP_002277525.1| PREDICTED: CAAX prenyl protease 1 homolog [Vitis vinifera] gi|297745342|emb|CBI40422.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356568433|ref|XP_003552415.1| PREDICTED: CAAX prenyl protease 1 homolog [Glycine max] Back     alignment and taxonomy information
>gi|357507535|ref|XP_003624056.1| CAAX prenyl protease-like protein [Medicago truncatula] gi|355499071|gb|AES80274.1| CAAX prenyl protease-like protein [Medicago truncatula] Back     alignment and taxonomy information
>gi|356531957|ref|XP_003534542.1| PREDICTED: CAAX prenyl protease 1 homolog [Glycine max] Back     alignment and taxonomy information
>gi|18411603|ref|NP_567212.1| CAAX prenyl protease 1-like protein [Arabidopsis thaliana] gi|75303258|sp|Q8RX88.1|FACE1_ARATH RecName: Full=CAAX prenyl protease 1 homolog; AltName: Full=Farnesylated proteins-converting enzyme 1; Short=AtFACE-1; Short=FACE-1; AltName: Full=Prenyl protein-specific endoprotease 1; AltName: Full=Zinc metalloproteinase Ste24 homolog; Short=AtSTE24 gi|19699057|gb|AAL90896.1| AT4g01320/F2N1_21 [Arabidopsis thaliana] gi|30102490|gb|AAP21163.1| At4g01320/F2N1_21 [Arabidopsis thaliana] gi|332656608|gb|AEE82008.1| CAAX prenyl protease 1-like protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query399
TAIR|locus:2124983424 ATSTE24 [Arabidopsis thaliana 0.974 0.917 0.845 4.6e-176
RGD|1305570475 Zmpste24 "zinc metallopeptidas 0.674 0.566 0.470 6.3e-89
MGI|MGI:1890508475 Zmpste24 "zinc metallopeptidas 0.674 0.566 0.467 8e-89
UNIPROTKB|O75844475 ZMPSTE24 "CAAX prenyl protease 0.661 0.555 0.483 1.7e-88
UNIPROTKB|E1BMF2475 ZMPSTE24 "Uncharacterized prot 0.661 0.555 0.479 2.7e-88
UNIPROTKB|F1PY82473 ZMPSTE24 "Uncharacterized prot 0.661 0.558 0.479 4.4e-88
ZFIN|ZDB-GENE-030131-6312468 zmpste24 "zinc metallopeptidas 0.659 0.561 0.477 4.4e-86
UNIPROTKB|F1NDA2468 ZMPSTE24 "Uncharacterized prot 0.659 0.561 0.473 5.7e-86
ASPGD|ASPL0000071441456 AN11231 [Emericella nidulans ( 0.964 0.844 0.428 1.6e-79
CGD|CAL0000665456 STE24 [Candida albicans (taxid 0.942 0.824 0.429 3.1e-76
TAIR|locus:2124983 ATSTE24 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1710 (607.0 bits), Expect = 4.6e-176, P = 4.6e-176
 Identities = 329/389 (84%), Positives = 349/389 (89%)

Query:     1 MVFPYMEAVVGFMILMYFFETYLDLRQHXXXXXXXXXXTLEGVISQEKFEKSRGYSLDKS 60
             M  P+ME VVGFMI+MY FETYLDLRQ           TL GVISQEKFEKSR YSLDKS
Sbjct:     1 MAIPFMETVVGFMIVMYIFETYLDLRQLTALKLPTLPKTLVGVISQEKFEKSRAYSLDKS 60

Query:    61 HFHFVHEFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQ 120
             +FHFVHEFVTILMDSAIL F ILPWFWK SG  L  +GLD ENEILHTLSFLAGVM WSQ
Sbjct:    61 YFHFVHEFVTILMDSAILFFGILPWFWKMSGAVLPRLGLDPENEILHTLSFLAGVMTWSQ 120

Query:   121 LTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPY 180
             +TDLPFSLYSTFVIE+RHGFNKQTIW+F RDMIKG  L+++LGPPIV+AII IVQKGGPY
Sbjct:   121 ITDLPFSLYSTFVIESRHGFNKQTIWMFIRDMIKGTFLSVILGPPIVAAIIFIVQKGGPY 180

Query:   181 LAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV 240
             LAIYLWAFMF+LSLVMMT+YPVLIAPLFNKFTPLP+G+LREKIEKLASSLKFPLKKLFVV
Sbjct:   181 LAIYLWAFMFILSLVMMTIYPVLIAPLFNKFTPLPDGDLREKIEKLASSLKFPLKKLFVV 240

Query:   241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIA 300
             DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKN++EIVAVIAHELGHWKLNHT YSFIA
Sbjct:   241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNEDEIVAVIAHELGHWKLNHTTYSFIA 300

Query:   301 VQVLTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRS 360
             VQ+L  LQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIP+QHLVSFGLNLVSR+
Sbjct:   301 VQILAFLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPLQHLVSFGLNLVSRA 360

Query:   361 FEFQADAFAKKLGYASALRAGLVKLQVIN 389
             FEFQADAFA KLGYA  LR  LVKLQ  N
Sbjct:   361 FEFQADAFAVKLGYAKDLRPALVKLQEEN 389
GO:0004222 "metalloendopeptidase activity" evidence=IEA;ISS
GO:0006508 "proteolysis" evidence=IEA;IDA
GO:0004175 "endopeptidase activity" evidence=IDA
GO:0005783 "endoplasmic reticulum" evidence=IDA
GO:0080120 "CAAX-box protein maturation" evidence=IDA
GO:0005773 "vacuole" evidence=IDA
GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA
GO:0051604 "protein maturation" evidence=RCA
RGD|1305570 Zmpste24 "zinc metallopeptidase STE24" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1890508 Zmpste24 "zinc metallopeptidase, STE24" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|O75844 ZMPSTE24 "CAAX prenyl protease 1 homolog" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BMF2 ZMPSTE24 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1PY82 ZMPSTE24 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-6312 zmpste24 "zinc metallopeptidase, STE24 homolog" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1NDA2 ZMPSTE24 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
ASPGD|ASPL0000071441 AN11231 [Emericella nidulans (taxid:162425)] Back     alignment and assigned GO terms
CGD|CAL0000665 STE24 [Candida albicans (taxid:5476)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8RX88FACE1_ARATH3, ., 4, ., 2, 4, ., 8, 40.86630.97490.9174yesno
Q80W54FACE1_MOUSE3, ., 4, ., 2, 4, ., 8, 40.45260.95480.8021yesno
O75844FACE1_HUMAN3, ., 4, ., 2, 4, ., 8, 40.45490.95480.8021yesno
Q54FH7FACE1_DICDI3, ., 4, ., 2, 4, ., 8, 40.38870.91220.8544yesno
Q6EPN8FACE1_ORYSJ3, ., 4, ., 2, 4, ., 8, 40.80710.97490.9152yesno
P47154STE24_YEAST3, ., 4, ., 2, 4, ., 8, 40.39500.96490.8498yesno
Q10071STE24_SCHPO3, ., 4, ., 2, 4, ., 8, 40.38940.95730.8059yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.4.24.840.979
3rd Layer3.4.240.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
estExt_fgenesh4_pg.C_LG_II1484
hypothetical protein (424 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
pfam01435223 pfam01435, Peptidase_M48, Peptidase family M48 2e-47
COG0501302 COG0501, HtpX, Zn-dependent protease with chaperon 7e-19
PRK03982288 PRK03982, PRK03982, heat shock protein HtpX; Provi 6e-06
PRK02391296 PRK02391, PRK02391, heat shock protein HtpX; Provi 2e-04
PTZ00029216 PTZ00029, PTZ00029, 60S ribosomal protein L10a; Pr 0.004
>gnl|CDD|216503 pfam01435, Peptidase_M48, Peptidase family M48 Back     alignment and domain information 
 Score =  161 bits (408), Expect = 2e-47
 Identities = 63/209 (30%), Positives = 94/209 (44%), Gaps = 22/209 (10%)

Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKF-TPLPEGELREKIEKLASS--LKFPLKKLFVVDGS 243
           A + + SLV+ T+    IA L N F TPL    L+  +E+LA S    FP  +++VVD  
Sbjct: 1   ALLLLSSLVLATIGAPYIAQLLNGFPTPLRNARLQRVVERLADSAGAGFPPWEVYVVD-- 58

Query: 244 TRSSHSNAYMYGFFKNKRIVLYDTLIQQCKNDEEIVAVIAHELGHWKLNHTMYSFIAVQV 303
             S   NA+  G  KNKR+V+   L+     ++E+ AV+ HE+GH K  H++ S     +
Sbjct: 59  --SPQPNAFALGGGKNKRVVVTTGLLL-ALTEDELAAVLGHEIGHIKARHSVESMSQGLL 115

Query: 304 LTLLQFGGYTLVRNSTDLFRSFGFDTQPVLIGLIIFQHTVIPIQHLVSFGLNLVSRSFEF 363
           L LL   G   +      F + GF T                   L+   L   SR  E+
Sbjct: 116 LNLLLLLGAAALGGRALGFNANGFLT--------------ALGIFLLQLLLLPYSRKQEY 161

Query: 364 QADAFAKKLGYASALRAGLVKLQVINQYL 392
           +AD    +LG    L     K +   ++L
Sbjct: 162 EADEAGARLGGDKDLARAGYKPRAAVKFL 190

Length = 223
>gnl|CDD|223575 COG0501, HtpX, Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>gnl|CDD|235186 PRK03982, PRK03982, heat shock protein HtpX; Provisional Back     alignment and domain information
>gnl|CDD|179418 PRK02391, PRK02391, heat shock protein HtpX; Provisional Back     alignment and domain information
>gnl|CDD|185405 PTZ00029, PTZ00029, 60S ribosomal protein L10a; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 399
KOG2719428 consensus Metalloprotease [General function predic 100.0
PRK03001283 M48 family peptidase; Provisional 100.0
PRK03982288 heat shock protein HtpX; Provisional 100.0
PRK01265324 heat shock protein HtpX; Provisional 100.0
PRK03072288 heat shock protein HtpX; Provisional 100.0
PRK02391296 heat shock protein HtpX; Provisional 100.0
PRK01345317 heat shock protein HtpX; Provisional 100.0
PRK02870336 heat shock protein HtpX; Provisional 100.0
PRK04897298 heat shock protein HtpX; Provisional 100.0
PRK05457284 heat shock protein HtpX; Provisional 99.97
PF01435226 Peptidase_M48: Peptidase family M48 This is family 99.94
COG0501302 HtpX Zn-dependent protease with chaperone function 99.92
COG4783 484 Putative Zn-dependent protease, contains TPR repea 99.69
PF05569299 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR0 99.56
COG4784 479 Putative Zn-dependent protease [General function p 99.39
KOG2661424 consensus Peptidase family M48 [Posttranslational 99.37
COG4219337 MecR1 Antirepressor regulating drug resistance, pr 99.03
PF04228292 Zn_peptidase: Putative neutral zinc metallopeptida 97.49
PF06114122 DUF955: Domain of unknown function (DUF955); Inter 97.25
PRK04351149 hypothetical protein; Provisional 96.92
PF04298222 Zn_peptidase_2: Putative neutral zinc metallopepti 96.83
COG1451223 Predicted metal-dependent hydrolase [General funct 96.62
PF01863205 DUF45: Protein of unknown function DUF45; InterPro 96.49
smart00731146 SprT SprT homologues. Predicted to have roles in t 94.64
PF1369979 DUF4157: Domain of unknown function (DUF4157) 94.62
PF10026195 DUF2268: Predicted Zn-dependent protease (DUF2268) 94.49
PF10263157 SprT-like: SprT-like family; InterPro: IPR006640 T 94.32
PF13203 292 DUF2201_N: Putative metallopeptidase domain 93.68
PF04450205 BSP: Peptidase of plants and bacteria; InterPro: I 93.03
COG3091156 SprT Zn-dependent metalloprotease, SprT family [Ge 92.59
PF12388211 Peptidase_M57: Dual-action HEIGH metallo-peptidase 92.44
PF02031132 Peptidase_M7: Streptomyces extracellular neutral p 90.21
PRK04860160 hypothetical protein; Provisional 89.8
PF12725318 DUF3810: Protein of unknown function (DUF3810); In 88.79
COG4900133 Predicted metallopeptidase [General function predi 88.33
COG2856213 Predicted Zn peptidase [Amino acid transport and m 85.89
PF08325186 WLM: WLM domain; InterPro: IPR013536 The WLM (WSS1 85.36
cd04268165 ZnMc_MMP_like Zinc-dependent metalloprotease, MMP_ 84.28
PRK09672305 phage exclusion protein Lit; Provisional 83.84
COG2738226 Predicted Zn-dependent protease [General function 83.79
COG2321295 Predicted metalloprotease [General function predic 81.65
>KOG2719 consensus Metalloprotease [General function prediction only] Back     alignment and domain information 
Probab=100.00  E-value=1.1e-79  Score=599.82  Aligned_cols=388  Identities=51%  Similarity=0.849  Sum_probs=373.3

Q ss_pred             CchHHHHHHHHHHHHHHHHHHHHHHHhhhcCCC-CChhhcccCCHHHHHHHHHHhhhhhhHHHHHHHHHH-HHHHHHHHh
Q 015854            3 FPYMEAVVGFMILMYFFETYLDLRQHAALKLPK-LPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTI-LMDSAILLF   80 (399)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~l~~rq~~~~~~~~-~P~~~~~~~~~~~~~k~~~Y~~~~~~~~~~~~~~~~-~~~~~~l~~   80 (399)
                      .+|+.+++++++..+.||+||+.||.+++++++ +|+++++.+|+|+++|||+|+++|.++++++...+. ...+..+++
T Consensus         6 ~~~~~~i~~f~i~~~~~~~yl~~Rq~~~~~~~~~~p~el~~~~~~et~~kar~y~~~k~~f~i~~~~~~~~~~~l~~L~~   85 (428)
T KOG2719|consen    6 MCRKSIILFFSIFLYLFETYLTERQLKVLKRTKLVPKELGGIIDQETFKKARSYERDKSIFSIFNLLLSLVLLLLLELYL   85 (428)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCchHhhcCCCHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            469999999999999999999999999998775 999999999999999999999999999999999999 899999999


Q ss_pred             chHHHHHHhhhhHHHHhccCCccchhHHHHHHHHHHHHHhhccccHHhhhhhhhhhccCCCCCCHHHHHHHHHHHHHHHH
Q 015854           81 RILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAI  160 (399)
Q Consensus        81 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~l~~~~~~lPf~~y~~f~le~~~g~~~~t~~~~~~d~~k~~~l~~  160 (399)
                      |.+|++|..++++..+     ..+++++++|+.+++.+++++++|+++|++|++|++||+||+|.+.|++|.+|+.++++
T Consensus        86 g~~~~lw~lt~~~~~~-----~~~~~~s~vF~~~~s~~~~l~~LP~~iys~fvie~~~gfnk~t~~~~~~d~lk~~~v~~  160 (428)
T KOG2719|consen   86 GALPFLWKLTGKFLGK-----AGEIWLSLVFLLLLSIYSTLLDLPSSIYSTFVLEEKHGFNKQTLSLFIIDGLKSLLVGV  160 (428)
T ss_pred             hHHHHHHHHHHHHhhh-----hhhhhhhhHHHHHHHHHHHHHhccHHHHHHHHHHhhcCCCcCcchhHHHHHHHHHHHHH
Confidence            9999999999887765     34899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccCCchhHHHHHHHHHHHcCCCCCcEEEE
Q 015854          161 VLGPPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVV  240 (399)
Q Consensus       161 ~l~~~l~~~~~~l~~~~~~~~~l~~~~~~~~~~l~~~~~~p~~i~plf~~~~pl~~~~L~~~i~~l~~~~g~~~~~i~v~  240 (399)
                      +++.|+++++.+++..+|+++.+|+|.+.++++++++.++|.+|+|+|+|++|+|++++++.||++|++.|+|.++++++
T Consensus       161 ~l~~Pi~~~iv~i~~~~g~yF~i~~w~f~~v~~l~l~ti~p~~i~P~f~K~~PLe~g~l~~~Ie~la~s~gfp~~k~~vi  240 (428)
T KOG2719|consen  161 VLTIPIVAAIVMILKKFGPYFFIYLWLFYFVLSLLLLTIYPGFIAPLFGKFTPLEEGDLKEKIERLADSVGFPLSKYRVI  240 (428)
T ss_pred             HHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCCCCCCCchHHHHHHHHHhcCCCceEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eCCCCCCCcceEEEccCCCceEEEcHhHHh--h-CCChHHHHHHHHHHhhhhhhchHHHHHHHHHHHHHHHHHHHHHHhc
Q 015854          241 DGSTRSSHSNAYMYGFFKNKRIVLYDTLIQ--Q-CKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRN  317 (399)
Q Consensus       241 d~s~~s~~~NA~~~G~~~~~~Ivl~~~Ll~--~-l~~~~El~AVlAHElGH~~~~h~~~~~~~~~~~~~~~~~l~~~~~~  317 (399)
                      |+|+||+++|||++|+++.|||+++|||+.  . + ++||+.||+|||+|||+++|+.|+.++.++..++.+.+++.+.+
T Consensus       241 ~~s~rs~hsNAyfyG~~~~KRIvIyDtLl~~~~~~-~~eel~AVl~HELGHW~~~H~~K~~ii~~~~l~l~~llF~~~~~  319 (428)
T KOG2719|consen  241 DGSKRSSHSNAYFYGLCKNKRIVIYDTLLLEEEHL-NNEELVAVLAHELGHWKLNHVLKNIIIMQIHLFLEFLLFGFLYR  319 (428)
T ss_pred             ecCCCCCCCCeeeeeccccceEEEehhhhhhhhcc-ccHHHHHHHHHHhhHHHHhhHHHHHHHHHHHHHHHHHHHHHHHc
Confidence            999999999999999999999999999983  2 4 79999999999999999999999999999999999999999999


Q ss_pred             CchhhhhcCCCC-chhHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhCCCCCC
Q 015854          318 STDLFRSFGFDT-QPVLIGLI-IFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVINQYLLPT  395 (399)
Q Consensus       318 ~~~l~~~~G~~~-~~~~i~l~-l~~~i~~p~~~~~~~l~~~~sR~~E~~AD~~A~~lg~~~~l~~aL~kL~~~n~~~~~p  395 (399)
                      ++++|.++|+.+ +|..+|++ +|..+++|+..+.+++++..||+.||+||++|.++|++++|++||.||..||++.|.|
T Consensus       320 ~~~ly~a~Gf~~~~P~~ig~livf~~~l~py~~l~~~~~n~~sR~fEyqAD~fA~klGYg~~L~~AL~KL~~dnlsf~~~  399 (428)
T KOG2719|consen  320 NPKLYAAFGFIDEQPSLIGFLIVFQFVLAPYRALLNFLMNLISRRFEYQADAFAKKLGYGKDLRQALIKLFVDNLSFPVS  399 (428)
T ss_pred             CcchheeecCCCCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhHHHHHHHHhhhhcCCCCC
Confidence            999999999987 78899997 7888899999999999999999999999999999999999999999999999999998


Q ss_pred             C
Q 015854          396 M  396 (399)
Q Consensus       396 ~  396 (399)
                      |
T Consensus       400 D  400 (428)
T KOG2719|consen  400 D  400 (428)
T ss_pred             c
Confidence            6

>PRK03001 M48 family peptidase; Provisional Back     alignment and domain information
>PRK03982 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK01265 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK03072 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK02391 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK01345 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK02870 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK04897 heat shock protein HtpX; Provisional Back     alignment and domain information
>PRK05457 heat shock protein HtpX; Provisional Back     alignment and domain information
>PF01435 Peptidase_M48: Peptidase family M48 This is family M48 in the peptidase classification Back     alignment and domain information
>COG0501 HtpX Zn-dependent protease with chaperone function [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4783 Putative Zn-dependent protease, contains TPR repeats [General function prediction only] Back     alignment and domain information
>PF05569 Peptidase_M56: BlaR1 peptidase M56; InterPro: IPR008756 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>COG4784 Putative Zn-dependent protease [General function prediction only] Back     alignment and domain information
>KOG2661 consensus Peptidase family M48 [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG4219 MecR1 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component [Transcription / Signal transduction mechanisms] Back     alignment and domain information
>PF04228 Zn_peptidase: Putative neutral zinc metallopeptidase; InterPro: IPR007343 Members of this family of bacterial proteins are described as hypothetical proteins or zinc metallopeptidases Back     alignment and domain information
>PF06114 DUF955: Domain of unknown function (DUF955); InterPro: IPR010359 This is a family of bacterial and viral proteins with undetermined function Back     alignment and domain information
>PRK04351 hypothetical protein; Provisional Back     alignment and domain information
>PF04298 Zn_peptidase_2: Putative neutral zinc metallopeptidase; InterPro: IPR007395 Members of this family of bacterial proteins are described as hypothetical proteins or zinc-dependent proteases Back     alignment and domain information
>COG1451 Predicted metal-dependent hydrolase [General function prediction only] Back     alignment and domain information
>PF01863 DUF45: Protein of unknown function DUF45; InterPro: IPR002725 Members of this family are found in some archaebacteria, as well as Helicobacter pylori Back     alignment and domain information
>smart00731 SprT SprT homologues Back     alignment and domain information
>PF13699 DUF4157: Domain of unknown function (DUF4157) Back     alignment and domain information
>PF10026 DUF2268: Predicted Zn-dependent protease (DUF2268); InterPro: IPR018728 This domain, found in various hypothetical bacterial proteins, as well as predicted zinc dependent proteases, has no known function Back     alignment and domain information
>PF10263 SprT-like: SprT-like family; InterPro: IPR006640 This is a family of uncharacterised bacterial proteins which includes Escherichia coli SprT (P39902 from SWISSPROT) Back     alignment and domain information
>PF13203 DUF2201_N: Putative metallopeptidase domain Back     alignment and domain information
>PF04450 BSP: Peptidase of plants and bacteria; InterPro: IPR007541 These basic secretory proteins (BSPs) are believed to be part of the plants defence mechanism against pathogens [] Back     alignment and domain information
>COG3091 SprT Zn-dependent metalloprotease, SprT family [General function prediction only] Back     alignment and domain information
>PF12388 Peptidase_M57: Dual-action HEIGH metallo-peptidase; InterPro: IPR024653 This entry represents the metallopeptidases M10, M27 and M57 Back     alignment and domain information
>PF02031 Peptidase_M7: Streptomyces extracellular neutral proteinase (M7) family; InterPro: IPR000013 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families Back     alignment and domain information
>PRK04860 hypothetical protein; Provisional Back     alignment and domain information
>PF12725 DUF3810: Protein of unknown function (DUF3810); InterPro: IPR024294 This family of bacterial proteins is functionally uncharacterised Back     alignment and domain information
>COG4900 Predicted metallopeptidase [General function prediction only] Back     alignment and domain information
>COG2856 Predicted Zn peptidase [Amino acid transport and metabolism] Back     alignment and domain information
>PF08325 WLM: WLM domain; InterPro: IPR013536 The WLM (WSS1-like metalloprotease) domain is a globular domain related to the zincin-like superfamily of Zn-dependent peptidase Back     alignment and domain information
>cd04268 ZnMc_MMP_like Zinc-dependent metalloprotease, MMP_like subfamily Back     alignment and domain information
>PRK09672 phage exclusion protein Lit; Provisional Back     alignment and domain information
>COG2738 Predicted Zn-dependent protease [General function prediction only] Back     alignment and domain information
>COG2321 Predicted metalloprotease [General function prediction only] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
4aw6_A482 Crystal Structure Of The Human Nuclear Membrane Zin 7e-90
2ypt_A482 Crystal Structure Of The Human Nuclear Membrane Zin 4e-89
4il3_A461 Crystal Structure Of S. Mikatae Ste24p Length = 461 8e-73
>pdb|4AW6|A Chain A, Crystal Structure Of The Human Nuclear Membrane Zinc Metalloprotease Zmpste24 (Face1) Length = 482 Back     alignment and structure 
Iteration: 1

 Score =  327 bits (838), Expect = 7e-90,   Method: Compositional matrix adjust.
 Identities = 189/422 (44%), Positives = 252/422 (59%), Gaps = 41/422 (9%)
Query: 8   AVVGFMILMYFFETYLDLRQHXXXXXXXXXX-TLEGVISQEKFEKSRGYSLDKSHFHFVH 66
           AV+ F   +Y +ET+L  RQ             L  ++  E FEKSR Y LDKS F F  
Sbjct: 22  AVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWS 81
Query: 67  EFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPF 126
              +    + ILLF  +P+ W+ SG F    G   E EI  +L FL    L+S L  LP+
Sbjct: 82  GLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPW 141
Query: 127 SLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLW 186
           SLY+TFVIE +HGFN+QT+  F +D IK  ++   +  P+ S ++ I++ GG Y  IY W
Sbjct: 142 SLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAW 201
Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRS 246
            F  V+SLV++T+Y   IAPLF+KFTPLPEG+L+E+IE +A S+ FPL K++VV+GS RS
Sbjct: 202 LFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRS 261
Query: 247 SHSNAYMYGFFKNKRIVLYDTLIQQ----------------------------------- 271
           SHSNAY YGFFKNKRIVL+DTL+++                                   
Sbjct: 262 SHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKK 321
Query: 272 --CKNDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGF-D 328
             CKN EE++AV+ HELGHWKL HT+ + I  Q+ + L F  + ++    +LF +FGF D
Sbjct: 322 QGCKN-EEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYD 380
Query: 329 TQPVLIG-LIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQV 387
           +QP LIG LIIFQ    P   ++SF L ++SR FEFQADAFAKKLG A  L + L+KL  
Sbjct: 381 SQPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKKLGKAKDLYSALIKLNK 440
Query: 388 IN 389
            N
Sbjct: 441 DN 442
>pdb|2YPT|A Chain A, Crystal Structure Of The Human Nuclear Membrane Zinc Metalloprotease Zmpste24 Mutant (E336a) In Complex With A Synthetic Csim Tetrapeptide From The C-Terminus Of Prelamin A Length = 482 Back     alignment and structure
>pdb|4IL3|A Chain A, Crystal Structure Of S. Mikatae Ste24p Length = 461 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query399
4aw6_A482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 7e-89
3cqb_A107 Probable protease HTPX homolog; heat shock protein 1e-05
3c37_A253 Peptidase, M48 family; Q74D82, GSR143A, structural 2e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-04
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-04
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} Length = 482 Back     alignment and structure
 Score =  276 bits (705), Expect = 7e-89
 Identities = 182/421 (43%), Positives = 247/421 (58%), Gaps = 39/421 (9%)

Query: 8   AVVGFMILMYFFETYLDLRQHAALKLP-KLPKTLEGVISQEKFEKSRGYSLDKSHFHFVH 66
           AV+ F   +Y +ET+L  RQ    K    +P  L  ++  E FEKSR Y LDKS F F  
Sbjct: 22  AVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWS 81

Query: 67  EFVTILMDSAILLFRILPWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPF 126
              +    + ILLF  +P+ W+ SG F    G   E EI  +L FL    L+S L  LP+
Sbjct: 82  GLYSETEGTLILLFGGIPYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPW 141

Query: 127 SLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLGPPIVSAIIIIVQKGGPYLAIYLW 186
           SLY+TFVIE +HGFN+QT+  F +D IK  ++   +  P+ S ++ I++ GG Y  IY W
Sbjct: 142 SLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCILLPVSSLLLYIIKIGGDYFFIYAW 201

Query: 187 AFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGSTRS 246
            F  V+SLV++T+Y   IAPLF+KFTPLPEG+L+E+IE +A S+ FPL K++VV+GS RS
Sbjct: 202 LFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGSKRS 261

Query: 247 SHSNAYMYGFFKNKRIVLYDTLIQQCK--------------------------------- 273
           SHSNAY YGFFKNKRIVL+DTL+++                                   
Sbjct: 262 SHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKK 321

Query: 274 ---NDEEIVAVIAHELGHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFDTQ 330
               +EE++AV+ HELGHWKL HT+ + I  Q+ + L F  + ++    +LF +FGF   
Sbjct: 322 QGCKNEEVLAVLGHELGHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYDS 381

Query: 331 PV--LIGLIIFQHTVIPIQHLVSFGLNLVSRSFEFQADAFAKKLGYASALRAGLVKLQVI 388
               +  LIIFQ    P   ++SF L ++SR FEFQADAFAKKLG A  L + L+KL   
Sbjct: 382 QPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQADAFAKKLGKAKDLYSALIKLNKD 441

Query: 389 N 389
           N
Sbjct: 442 N 442
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633} Length = 107 Back     alignment and structure
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca} Length = 253 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query399
4aw6_A482 CAAX prenyl protease 1 homolog; hydrolase, M48 pep 100.0
3c37_A253 Peptidase, M48 family; Q74D82, GSR143A, structural 99.9
3cqb_A107 Probable protease HTPX homolog; heat shock protein 99.73
3dte_A301 IRRE protein; radiotolerance, gene regulation, met 95.08
>4aw6_A CAAX prenyl protease 1 homolog; hydrolase, M48 peptidase, integral membrane protein, prelami processing, ageing, progeria; HET: PC1; 3.40A {Homo sapiens} PDB: 2ypt_A Back     alignment and structure
Probab=100.00  E-value=2.8e-86  Score=672.98  Aligned_cols=391  Identities=48%  Similarity=0.814  Sum_probs=360.8

Q ss_pred             hHHHHHHHHHHHHHHHHHHHHHHHhhhcC-CCCChhhcccCCHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhchH
Q 015854            5 YMEAVVGFMILMYFFETYLDLRQHAALKL-PKLPKTLEGVISQEKFEKSRGYSLDKSHFHFVHEFVTILMDSAILLFRIL   83 (399)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~l~~rq~~~~~~-~~~P~~~~~~~~~~~~~k~~~Y~~~~~~~~~~~~~~~~~~~~~~l~~g~~   83 (399)
                      ..++++++++++++||.||++||+|++++ .++|+++++++|+|+|+||++|+++|.++++++++++.+..++++++|++
T Consensus        19 ~~~~il~~~~~~~~~e~yL~~RQ~~~~~~~~~vP~~l~~~~~~e~f~ka~~Y~~~k~~f~~~~~~~~~i~~~~~l~~g~~   98 (482)
T 4aw6_A           19 IFGAVLLFSWTVYLWETFLAQRQRRIYKTTTHVPPELGQIMDSETFEKSRLYQLDKSTFSFWSGLYSETEGTLILLFGGI   98 (482)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSCCSGGGTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH
Confidence            45688999999999999999999999875 47999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhhHHHHhccCCccchhHHHHHHHHHHHHHhhccccHHhhhhhhhhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015854           84 PWFWKKSGNFLVLVGLDAENEILHTLSFLAGVMLWSQLTDLPFSLYSTFVIEARHGFNKQTIWLFFRDMIKGMILAIVLG  163 (399)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~l~~~~~~lPf~~y~~f~le~~~g~~~~t~~~~~~d~~k~~~l~~~l~  163 (399)
                      |++|++++++....+..+.++++++++|++++++++++++|||++|++|++|+||||||||++.|++|++|+.+++.+++
T Consensus        99 ~~lw~~~~~~~~~~~~~~~~~i~~s~~f~~~~~l~~~l~~LP~~~Y~tfvle~~~Gfnk~t~~~f~~D~~k~~~l~~vi~  178 (482)
T 4aw6_A           99 PYLWRLSGRFCGYAGFGPEYEITQSLVFLLLATLFSALAGLPWSLYNTFVIEEKHGFNQQTLGFFMKDAIKKFVVTQCIL  178 (482)
T ss_dssp             HHHHHHTCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTTCBCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcccccchhHHHHHHHHHHHHHHHHHHhHHHHHHheeehhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999887776655433357899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCccCCchhHHHHHHHHHHHcCCCCCcEEEEeCC
Q 015854          164 PPIVSAIIIIVQKGGPYLAIYLWAFMFVLSLVMMTLYPVLIAPLFNKFTPLPEGELREKIEKLASSLKFPLKKLFVVDGS  243 (399)
Q Consensus       164 ~~l~~~~~~l~~~~~~~~~l~~~~~~~~~~l~~~~~~p~~i~plf~~~~pl~~~~L~~~i~~l~~~~g~~~~~i~v~d~s  243 (399)
                      .|++++++|+++++|++||+|+|++.+++++++++++|.+|.|+|||++|++|++|+++|+++|++.|+|.+++|++|+|
T Consensus       179 ~pl~~~~~~ii~~~g~~~wl~~w~~~~~~~l~~~~iyP~~I~PLfnk~~Pl~dg~L~~~Ie~la~~~~fp~~~v~vv~gS  258 (482)
T 4aw6_A          179 LPVSSLLLYIIKIGGDYFFIYAWLFTLVVSLVLVTIYADYIAPLFDKFTPLPEGKLKEEIEVMAKSIDFPLTKVYVVEGS  258 (482)
T ss_dssp             HHHHHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHHHHHHTHHHHSCEEECCSSHHHHHHHHHHHHTTCCEEEEEEECGG
T ss_pred             HHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccCCcHHHHHHHHHHHHHcCCCCCcEEEEeCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCcceEEEccCCCceEEEcHhHHhh-------------------------------------CCChHHHHHHHHHHh
Q 015854          244 TRSSHSNAYMYGFFKNKRIVLYDTLIQQ-------------------------------------CKNDEEIVAVIAHEL  286 (399)
Q Consensus       244 ~~s~~~NA~~~G~~~~~~Ivl~~~Ll~~-------------------------------------l~~~~El~AVlAHEl  286 (399)
                      |||+++|||++|++++||||++||++++                                     | ++||++||+|||+
T Consensus       259 kRs~~~NAy~~G~~~~krIVl~dtLl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~El~aVlaHEl  337 (482)
T 4aw6_A          259 KRSSHSNAYFYGFFKNKRIVLFDTLLEEYSVLNKDIQEDSGMEPRNEEEGNSEEIKAKVKNKKQGC-KNEEVLAVLGHEL  337 (482)
T ss_dssp             GTBSCCCEEEEESSSCEEEEEEHHHHC------------------------------------CCC-CHHHHHHHHHHHH
T ss_pred             CCCCCCceEEEcCCCCcEEEEEchHHHhcccccccccccccccccccccccchhhcccchhhccCC-CHHHHHHHHHHHH
Confidence            9999999999999999999999999998                                     8 9999999999999


Q ss_pred             hhhhhchHHHHHHHHHHHHHHHHHHHHHHhcCchhhhhcCCC-CchhHHHHH-HHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 015854          287 GHWKLNHTMYSFIAVQVLTLLQFGGYTLVRNSTDLFRSFGFD-TQPVLIGLI-IFQHTVIPIQHLVSFGLNLVSRSFEFQ  364 (399)
Q Consensus       287 GH~~~~h~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~G~~-~~~~~i~l~-l~~~i~~p~~~~~~~l~~~~sR~~E~~  364 (399)
                      ||++++|+.+++..+.+..++.+++++.+.+++.+++++|++ ..|..+++. ++..+++|++.+.+++.+.+||++|++
T Consensus       338 gH~~~~~~~~~~~~~~i~~~~~~~l~~~l~~~~~l~~~~G~~~~~p~~~~~llv~~~i~~P~~~l~~~i~~~~SR~~E~e  417 (482)
T 4aw6_A          338 GHWKLGHTVKNIIISQMNSFLCFFLFAVLIGRKELFAAFGFYDSQPTLIGLLIIFQFIFSPYNEVLSFCLTVLSRRFEFQ  417 (482)
T ss_dssp             HHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTCSHHHHHTTCCSCCCHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHcccHHHHHHHHHHHHHHHHHHHHHHHcchhhHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence            999999999999999988888888889999888899999984 345566654 456677898888999999999999999


Q ss_pred             HHHHHHHcCChHHHHHHHHHHHHHhCCCCCCC
Q 015854          365 ADAFAKKLGYASALRAGLVKLQVINQYLLPTM  396 (399)
Q Consensus       365 AD~~A~~lg~~~~l~~aL~kL~~~n~~~~~p~  396 (399)
                      ||++|+++|+|+++++||+||+++|.+.+.|+
T Consensus       418 AD~~a~~lg~p~~L~~AL~KL~~~n~s~~~~~  449 (482)
T 4aw6_A          418 ADAFAKKLGKAKDLYSALIKLNKDNLGFPVSD  449 (482)
T ss_dssp             HHHHHHHTTTHHHHHHHHHHHHHHTTCCSCCC
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHhcccCCCCC
Confidence            99999999999999999999999998877664
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca} Back     alignment and structure
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633} Back     alignment and structure
>3dte_A IRRE protein; radiotolerance, gene regulation, metallopeptidase; 2.60A {Deinococcus deserti} PDB: 3dti_A 3dtk_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00