Citrus Sinensis ID: 015867

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------40
Protein Sequence
MMEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE
Secondary Structure (PSIPRED)
ccccccHHHHHcccccccccHHHHHHHHHccccccccccccccccccccccccccEEEEccccccccEEEEcccccccccEEEEEEEcccccEEEEEEEcccHHHHHHHHHHHHHHHHHHHccccccccEEEEcccccccccEEEEEccccccHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEEcccccccccccccccccccccccccccccEEEEEcccccccccccEEEcccccccccEEEEccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHccccccccccccccccccccccccccccccccccHHHHHHcccccHHHHHHHHHHHHHcccccccccHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccEEEEccccccccEEEEEEccccccEEEEEEEccccccEEEEEEEccccccHHHHHHHHHHHHHHHccccccccccccccccHcccccEEEEEEcccccHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccEEcccccHHHEEEcccccEEEccccccccccccccccccccccEEccHHHcEEccEccccccccHHHccHHHHcccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccHHHHHHHcHHHHHHHHcccccccccccccccHccccccccccccHHHHHcccccHHHHHHHHHHccccccccccHHHHHccHHHHHHcc
Coil and Loop (DISEMBL)
MMEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGataaaakhvspprrdddreghyvfnlgenltpRYKILSKmgegtfgrvLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLakndkggsshcvQIRNWFDYRNHICIVFEKlgpslfdflkrnkycpfpvDLVREFGRQLLESVAYMHDLRLIhtdlkpenillvssefiklpgykrsssgempfrclpkssaiklidfgstafdnqnhssivstrhyrapevilglgwsypcdmwsvGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASrgtekyfrrgsrlnwpegavsrESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGllrydpserltarqalnhpffrnlne
Flexible Loop (DISEMBL)
mmeqerttkrrrlawdvapsEAEAQRALVVGHEGAtaaaakhvspprrdddrEGHYVfnlgenltpryKILSKMGEGTFGRvlecwdrqtqervaiKVVRSIRKYRDAAMIEIDVLQHlakndkggssHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPgykrsssgempfRCLPKSSAIKLIDFGSTAFDNQNHssivstrhyrAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASrgtekyfrrgsrlnwpegavsresikavkkldrlknmvslhvdrarstLTDLLHGLLRYDPserltarqalnhpffrnlne
Low Complexity Region (SEG)
MMEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE
Disordered region (IsUnstruct)
******************************************************HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK*******PFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGP***************YFRRGSRLNWPEGAV***SIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP********************
Disordered Region (DISOPRED)
****************************************************EGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY************LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRG*********************************RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN***
Disordered Region (DISEMBL)
*************AWDVAPSEAEAQRALVVG*******************DREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE
Disordered Region (DISPRO)
**************W*VAPSEAEAQRALVVGHE*************RRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MMEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	399	2.2.26 [Sep-21-2011]
P51568	400	Serine/threonine-protein	yes	no	0.977	0.975	0.756	1e-179
P51566	467	Serine/threonine-protein	no	no	0.974	0.832	0.673	1e-159
P51567	427	Serine/threonine-protein	no	no	0.969	0.906	0.635	1e-154
Q10156	690	Dual specificity protein	yes	no	0.924	0.534	0.466	2e-99
P49760	499	Dual specificity protein	yes	no	0.837	0.669	0.480	2e-92
O35491	499	Dual specificity protein	yes	no	0.829	0.663	0.478	1e-91
Q9HAZ1	481	Dual specificity protein	no	no	0.839	0.696	0.458	6e-88
O35493	481	Dual specificity protein	no	no	0.839	0.696	0.458	4e-87
P49762	832	Serine/threonine-protein	no	no	0.854	0.409	0.467	4e-87
P49759	484	Dual specificity protein	no	no	0.832	0.685	0.465	2e-86

>sp|P51568|AFC3_ARATH Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2

 Score =  628 bits (1619), Expect = e-179,   Method: Compositional matrix adjust.
 Identities = 299/395 (75%), Positives = 342/395 (86%), Gaps = 5/395 (1%)

Query: 2   MEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLG 61
           M++ER  KR R+ WD AP+E EA+RA++ GH     +  + +SPP RDDDR+GHYVF+L 
Sbjct: 9   MDKERVRKRPRMTWDEAPAEPEAKRAVIKGH----GSDGRILSPPLRDDDRDGHYVFSLR 64

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           +NLTPRYKILSKMGEGTFGRVLECWDR T+E VAIK++RSI+KYRDAAMIEIDVLQ L K
Sbjct: 65  DNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVK 124

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
           +DKG  + CVQ++NWFDYRNHICIVFEKLGPSLFDFLKRNKY  FP+ LVR+FG QLLES
Sbjct: 125 SDKG-RTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQLLES 183

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           VAYMH+L+L+HTDLKPENILLVSSE +KLP  KRS++ E  FRCLPKSSAIKLIDFGST 
Sbjct: 184 VAYMHELQLVHTDLKPENILLVSSENVKLPDNKRSAANETHFRCLPKSSAIKLIDFGSTV 243

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
            DN+ H SIV TRHYR+PEVILGLGWSY CD+WS+GCIL ELCTGEALFQTH+NLEHLAM
Sbjct: 244 CDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAM 303

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           MERALGPLPEHM R+ASRG EKYFRRG RLNWPEGA SRESI+AVK+LDRLK+MVS HVD
Sbjct: 304 MERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVD 363

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
             RS   DLL+GLL YDPSERLTA +AL+HPFF++
Sbjct: 364 NTRSRFADLLYGLLAYDPSERLTANEALDHPFFKS 398

Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 2EC: .EC: 1

>sp|P51566|AFC1_ARATH Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2

 Score =  562 bits (1448), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 278/413 (67%), Positives = 322/413 (77%), Gaps = 24/413 (5%)

Query: 5   ERTTKRRRLAWDVAPSEAEA-------QRALVVGHEGATAAAAKHV-------------S 44
           +R  KR RL WD AP            Q  L  G E A+      V             S
Sbjct: 32  KRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYPNMFYNGLPRQGS 91

Query: 45  PPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK 104
           PP R DD++GHYVF +G+ LTPRY+ILSKMGEGTFG+VLEC+D + +E VAIKV+RSI K
Sbjct: 92  PPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNKNKEVVAIKVIRSINK 151

Query: 105 YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYC 164
           YR+AAMIEIDVLQ L ++D GGS  CVQIRNWFDYRNHICIVFEKLGPSL+DFL++N Y 
Sbjct: 152 YREAAMIEIDVLQRLTRHDVGGS-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSYR 210

Query: 165 PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK---RSSSGEM 221
            FP+DLVRE GRQLLESVAYMHDLRLIHTDLKPENILLVSSE+IK+P YK   R +    
Sbjct: 211 SFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDGS 270

Query: 222 PFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILV 281
            F+ LPKSSAIKLIDFGST F++Q+H+ IVSTRHYRAPEVILG+GW+YPCD+WS+GCILV
Sbjct: 271 YFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGWNYPCDLWSIGCILV 330

Query: 282 ELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRE 341
           ELC+GEALFQTHENLEHLAMMER LGPLP HM+ RA R +EKYFRRG++L+WPEGA SR+
Sbjct: 331 ELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRRGAKLDWPEGATSRD 390

Query: 342 SIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           S+KAV KL RL N++  HVD +   L DLL GLLRYDP+ER  AR+ALNHPFF
Sbjct: 391 SLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKAREALNHPFF 443

Activator of yeast transcription factor, STE12.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P51567|AFC2_ARATH Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1

 Score =  546 bits (1407), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 260/409 (63%), Positives = 324/409 (79%), Gaps = 22/409 (5%)

Query: 6   RTTKRRRLAWDVAPSEAEAQRALVVGHE----------GATA---------AAAKHVSPP 46
           R  KR RL WDV P   +AQ  +  G E          GA +           A++ SPP
Sbjct: 17  RPRKRARLGWDVLPQATKAQVGMFCGQEIGNISSFASSGAPSDNSSSLCVKGVARNGSPP 76

Query: 47  RRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR 106
            R+DD++GHY+F LG++LTPRYKI SKMGEGTFG+VLECWDR+ +E VA+K+VR ++KYR
Sbjct: 77  WREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDRERKEMVAVKIVRGVKKYR 136

Query: 107 DAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPF 166
           +AAMIEI++LQ L K+DKGG+  CVQIRNWFDYRNHICIVFEKLG SL+DFL++N Y  F
Sbjct: 137 EAAMIEIEMLQQLGKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLRKNNYRSF 195

Query: 167 PVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS-SGEMPFRC 225
           P+DLVRE G QLLE VA+MHDLR+IHTDLKPENILLVSS+++K+P YK S    ++ ++ 
Sbjct: 196 PIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVKIPEYKGSRLQRDVCYKR 255

Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           +PKSSAIK+IDFGST ++ Q+ + IVSTRHYRAPEVILGLGWSYPCD+WSVGCI+VELCT
Sbjct: 256 VPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLGWSYPCDVWSVGCIIVELCT 315

Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
           GEALFQTHENLEHLAMMER LGP P+ M+++  R +EKY RRG RL+WP+GA SR+S+KA
Sbjct: 316 GEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVRRG-RLDWPDGATSRDSLKA 374

Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           V KL RL+N++  HVD +   L +++ GLLR+DPSER+TAR+AL HPFF
Sbjct: 375 VLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITAREALRHPFF 423

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q10156|LKH1_SCHPO Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=lkh1 PE=1 SV=3

 Score =  362 bits (930), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 181/388 (46%), Positives = 252/388 (64%), Gaps = 19/388 (4%)

Query: 9   KRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRY 68
           KR+R AW   P   +  R  V      TA        P   DD +GHY          RY
Sbjct: 312 KRKRAAW---PPYKKVDRVNVPVVHDTTAFD------PSTFDDDDGHYKVVPNSKFANRY 362

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
            ++  +G GTFG+V++C+D+ T    AIKV R+I KYR+A++IE+ VLQ +A +D    +
Sbjct: 363 TVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREASLIELRVLQTIAHSDPTNEN 422

Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            C+Q+R++FDYR HICIV +  G S+FDFLK N Y PFP+  ++   +QL +SVA++H L
Sbjct: 423 KCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLKHIQMLSQQLFKSVAFLHSL 482

Query: 189 RLIHTDLKPENILLVS--SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
            L+HTDLKPEN+LLVS  S  I+LP Y+  S   +       S  I+LIDFGS  F+++ 
Sbjct: 483 GLVHTDLKPENVLLVSNASRTIRLP-YRNYSQKVL------NSCEIRLIDFGSATFEDEY 535

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL 306
           HSS+VSTRHYRAPE+ILGLGWSYPCD+WS+GCILVEL TG+ALFQTHE+ EHL MME+ L
Sbjct: 536 HSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELFTGQALFQTHEDSEHLCMMEKIL 595

Query: 307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST 366
           GP   +MI R+SR ++++F+   ++ +P     ++SI  ++ L  L+ + ++      + 
Sbjct: 596 GPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSINYLQSLQTLEQIFAVSSPEV-AL 654

Query: 367 LTDLLHGLLRYDPSERLTARQALNHPFF 394
           L DLL  +  YDP  R+TA++AL HPFF
Sbjct: 655 LLDLLKKVFVYDPKRRITAKEALWHPFF 682

Protein kinase that may act as a negative regulator of filamentous growth and flocculation. Appears to have a role in normal cell wall and septum formation and in cell seperation. May have antagonistic function in the regulation of beta-glucan distribution between the sites for cell wall and septum assembly.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49760|CLK2_HUMAN Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1

 Score =  339 bits (869), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 170/354 (48%), Positives = 240/354 (67%), Gaps = 20/354 (5%)

Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVRSIRKYRD 107
           +DD EGH ++++G+ L  RY+I+S +GEGTFGRV++C D R+   RVA+K+++++ KY++
Sbjct: 144 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 203

Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           AA +EI+VL+ + + D    + CVQ+ +WFDY  H+CI FE LG S FDFLK N Y P+P
Sbjct: 204 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 263

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           +  VR    QL ++V ++HD +L HTDLKPENIL V+S++      ++            
Sbjct: 264 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSV----- 318

Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           KS+A++++DFGS  FD+++HS+IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   G 
Sbjct: 319 KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 378

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESI 343
            LFQTH+N EHLAMMER LGP+P  MIR+  +  +KYF RG RL+W E    G   RE+ 
Sbjct: 379 TLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVRENC 435

Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           K +++   L +    H       L DL+  +L Y+P++RLT  +AL HPFF  L
Sbjct: 436 KPLRRY--LTSEAEEH-----HQLFDLIESMLEYEPAKRLTLGEALQHPFFARL 482

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35491|CLK2_MOUSE Dual specificity protein kinase CLK2 OS=Mus musculus GN=Clk2 PE=1 SV=2

 Score =  337 bits (863), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 168/351 (47%), Positives = 239/351 (68%), Gaps = 20/351 (5%)

Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVRSIRKYRD 107
           +DD EGH ++++G+ L  RY+I+S +GEGTFGRV++C D R+   +VA+K+++++ KY++
Sbjct: 143 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGTQVALKIIKNVEKYKE 202

Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           AA +EI+VL+ + + D    + CVQ+ +WFDY  H+CI FE LG S FDFLK N Y P+P
Sbjct: 203 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 262

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           +  VR    QL ++V ++HD +L HTDLKPENIL V+S++      ++            
Sbjct: 263 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSV----- 317

Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           KS+A++++DFGS  FD+++HS+IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   G 
Sbjct: 318 KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 377

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESI 343
            LFQTH+N EHLAMMER LGP+P  MIR+  +  +KYF RG RL+W E    G   RE+ 
Sbjct: 378 TLFQTHDNREHLAMMERILGPVPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVRENC 434

Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           K +++   L +    H       L DL+  +L Y+P++RLT  +AL HPFF
Sbjct: 435 KPLRRY--LTSEAEDH-----HQLFDLIENMLEYEPAKRLTLGEALQHPFF 478

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex. May be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing and can cause redistribution of SR proteins from speckles to a diffuse nucleoplasmic distribution. Acts as a suppressor of hepatic gluconeogenesis and glucose output by repressing PPARGC1A transcriptional activity on gluconeogenic genes via its phosphorylation. Phosphorylates PPP2R5B thereby stimulating the assembly of PP2A phosphatase with the PPP2R5B-AKT1 complex leading to dephosphorylation of AKT1. Phosphorylates: PTPN1, SRSF1 and SRSF3. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|Q9HAZ1|CLK4_HUMAN Dual specificity protein kinase CLK4 OS=Homo sapiens GN=CLK4 PE=1 SV=1

 Score =  324 bits (831), Expect = 6e-88,   Method: Compositional matrix adjust.
 Identities = 159/347 (45%), Positives = 232/347 (66%), Gaps = 12/347 (3%)

Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQE-RVAIKVVRSIRKYRD 107
           +DD EGH +   G+ L  RY+I+  +GEG FG+V+EC D       VA+K+V+++ +YR+
Sbjct: 140 EDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGMHVAVKIVKNVGRYRE 199

Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           AA  EI VL+HL   D      CVQ+  WFD+  H+CIVFE LG S +DF+K N + PF 
Sbjct: 200 AARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQ 259

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           +D +R+   Q+ +S+ ++H  +L HTDLKPENIL V S+++     K +S  +   R L 
Sbjct: 260 IDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV----VKYNSKMKRDERTL- 314

Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           K++ IK++DFGS  +D+++HS++VSTRHYRAPEVIL LGWS PCD+WS+GCIL+E   G 
Sbjct: 315 KNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 374

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +FQTH++ EHLAMMER LGP+P+HMI++  +   KYF   ++L+W E + +   ++  +
Sbjct: 375 TVFQTHDSKEHLAMMERILGPIPQHMIQKTRK--RKYFHH-NQLDWDEHSSAGRYVR--R 429

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           +   LK  +  H D     L DL+  +L YDP++R+T  +AL HPFF
Sbjct: 430 RCKPLKEFMLCH-DEEHEKLFDLVRRMLEYDPTQRITLDEALQHPFF 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|O35493|CLK4_MOUSE Dual specificity protein kinase CLK4 OS=Mus musculus GN=Clk4 PE=1 SV=1

 Score =  322 bits (824), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 159/347 (45%), Positives = 230/347 (66%), Gaps = 12/347 (3%)

Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQE-RVAIKVVRSIRKYRD 107
           +DD EGH +   G+ L  RY+I+  +GEG FG+V+EC D       VA+K+V+++ +YR+
Sbjct: 140 EDDEEGHLICQSGDVLRARYEIVDTLGEGAFGKVVECIDHGMDGLHVAVKIVKNVGRYRE 199

Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           AA  EI VL+HL   D      CVQ+  WFD+  H+CIVFE LG S +DF+K N + PF 
Sbjct: 200 AARSEIQVLEHLNSTDPNSVFRCVQMLEWFDHHGHVCIVFELLGLSTYDFIKENSFLPFQ 259

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           +D +R+   Q+ +S+ ++H  +L HTDLKPENIL V S+++     K +S  +   R L 
Sbjct: 260 IDHIRQMAYQICQSINFLHHNKLTHTDLKPENILFVKSDYV----VKYNSKMKRDERTL- 314

Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           K++ IK++DFGS  +D+++HS++VSTRHYRAPEVIL LGWS PCD+WS+GCIL+E   G 
Sbjct: 315 KNTDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGF 374

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +FQTH++ EHLAMMER LGP+P HMI++  +   KYF   ++L+W E + +   ++  +
Sbjct: 375 TVFQTHDSKEHLAMMERILGPIPAHMIQKTRK--RKYFHH-NQLDWDEHSSAGRYVR--R 429

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           +   LK  +  H D     L DL+  +L YDP+ R+T  +AL HPFF
Sbjct: 430 RCKPLKEFMLCH-DEEHEKLFDLVRRMLEYDPARRITLDEALQHPFF 475

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates SRSF1 and SRSF3. Required for the regulation of alternative splicing of MAPT/TAU. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49762|DOA_DROME Serine/threonine-protein kinase Doa OS=Drosophila melanogaster GN=Doa PE=1 SV=2

 Score =  322 bits (824), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 167/357 (46%), Positives = 232/357 (64%), Gaps = 16/357 (4%)

Query: 46  PRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY 105
           P   DD +GH +++ G+ L  RYKI++ +GEGTFGRV++  D +    +A+K+++++ KY
Sbjct: 457 PVIQDDADGHLIYHTGDILHHRYKIMATLGEGTFGRVVKVKDMERDYCMALKIIKNVEKY 516

Query: 106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
           R+AA +EI+ L+ +A+ D      CV++ +WFDY  H+CIVFE LG S+FDFL+ N Y P
Sbjct: 517 REAAKLEINALEKIAQKDPHCDHLCVKMIDWFDYHGHMCIVFEMLGLSVFDFLRENNYEP 576

Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
           +P+D VR    QL  SV ++HD RL HTDLKPENIL V S++     Y    + E+  R 
Sbjct: 577 YPLDQVRHMAYQLCYSVKFLHDNRLTHTDLKPENILFVDSDYTS--HYNHKINREV--RR 632

Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           + K++ ++LIDFGS  FD+++HS+IVSTRHYRAPEVIL LGWS PCD+WS+GCIL EL  
Sbjct: 633 V-KNTDVRLIDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCILFELYL 691

Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRR---ASRGTEKYFRRGSRLNWPEGAVSRES 342
           G  LFQTH+N EHLAMMER LG +P  M R     S+   KYF  G +L+W E + +   
Sbjct: 692 GITLFQTHDNREHLAMMERILGQIPYRMARNHTLYSKTKTKYFYHG-KLDWDEKSSAGRY 750

Query: 343 IKAVKKLDRLKN--MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           ++     D  K   +  L        L  L+  +L Y+PS R+T  +AL+HPFF  L
Sbjct: 751 VR-----DHCKPLFLCQLSDSEDHCELFSLIKKMLEYEPSSRITLGEALHHPFFDRL 802

Negative regulator of the copia retrotransposon element of the white (w) gene. In the eye, it is required for normal pigmentation, photoreceptor cell development and for organization of interommatidial bristles. Also essential for embryonic segmentation and differentiation of the nervous system. Functions in the control of alternative splicing by phosphorylating the argine/serine-rich splicing factors, SR proteins.

Drosophila melanogaster (taxid: 7227)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

>sp|P49759|CLK1_HUMAN Dual specificity protein kinase CLK1 OS=Homo sapiens GN=CLK1 PE=1 SV=2

 Score =  320 bits (819), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 163/350 (46%), Positives = 230/350 (65%), Gaps = 18/350 (5%)

Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRD 107
           +DD EGH +   G+ L+ RY+I+  +GEG FG+V+EC D +   R VA+K+V+++ +Y +
Sbjct: 142 EDDEEGHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCE 201

Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           AA  EI VL+HL   D   +  CVQ+  WF++  HICIVFE LG S +DF+K N + PF 
Sbjct: 202 AARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFR 261

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--PGYKRSSSGEMPFRC 225
           +D +R+   Q+ +SV ++H  +L HTDLKPENIL V S++ +   P  KR     +    
Sbjct: 262 LDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI---- 317

Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
              +  IK++DFGS  +D+++HS++VSTRHYRAPEVIL LGWS PCD+WS+GCIL+E   
Sbjct: 318 ---NPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYL 374

Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE-GAVSRESIK 344
           G  +F TH++ EHLAMMER LGPLP+HMI++  +   KYF    RL+W E  +  R   +
Sbjct: 375 GFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHH-DRLDWDEHSSAGRYVSR 431

Query: 345 AVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
             K L     M+S  V+  R  L DL+  +L YDP++R+T R+AL HPFF
Sbjct: 432 RCKPLKEF--MLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 477

Dual specificity kinase acting on both serine/threonine and tyrosine-containing substrates. Phosphorylates serine- and arginine-rich (SR) proteins of the spliceosomal complex and may be a constituent of a network of regulatory mechanisms that enable SR proteins to control RNA splicing. Phosphorylates: SRSF1, SRSF3 and PTPN1. Regulates the alternative splicing of tissue factor (F3) pre-mRNA in endothelial cells and adenovirus E1A pre-mRNA.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 2

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
224089074	404	predicted protein [Populus trichocarpa]	0.979	0.967	0.843	0.0
356515564	403	PREDICTED: serine/threonine-protein kina	0.982	0.972	0.840	0.0
255551080	403	afc, putative [Ricinus communis] gi|2235	0.987	0.977	0.841	0.0
449499304	400	PREDICTED: serine/threonine-protein kina	0.977	0.975	0.815	0.0
449442024	400	PREDICTED: serine/threonine-protein kina	0.977	0.975	0.813	0.0
225430077	402	PREDICTED: serine/threonine-protein kina	0.947	0.940	0.831	0.0
357466609	402	Serine/threonine protein kinase AFC3 [Me	0.977	0.970	0.79	0.0
357466607	400	Serine/threonine protein kinase AFC3 [Me	0.972	0.97	0.787	1e-180
15233872	400	serine/threonine-protein kinase AFC3 [Ar	0.977	0.975	0.756	1e-177
79326149	392	serine/threonine-protein kinase AFC3 [Ar	0.977	0.994	0.756	1e-177

>gi|224089074|ref|XP_002308625.1| predicted protein [Populus trichocarpa] gi|222854601|gb|EEE92148.1| predicted protein [Populus trichocarpa]

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/395 (84%), Positives = 361/395 (91%), Gaps = 4/395 (1%)

Query: 1   MMEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNL 60
           M +Q+R  KR R AWDV P++ E +  +V  +EG    AA++VSPPRR+DDREGHY+FNL
Sbjct: 11  MEKQQRVRKRPRFAWDVGPAQPEERAPVVARNEGM---AARYVSPPRREDDREGHYMFNL 67

Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
           GENLTPRYKILSKMGEGTFGRVLECWDRQT+E VAIKVVRSI KYRDAAMIE+D+LQ +A
Sbjct: 68  GENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIHKYRDAAMIEVDILQRVA 127

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           KN+K  SS CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKY PFPVDLVREFGRQLLE
Sbjct: 128 KNEKA-SSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYSPFPVDLVREFGRQLLE 186

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           SVAYMHDLRLIHTDLKPENILLVSSE+IKLPG KRSSS EM FRCLPKSS+IKLIDFGST
Sbjct: 187 SVAYMHDLRLIHTDLKPENILLVSSEYIKLPGSKRSSSDEMHFRCLPKSSSIKLIDFGST 246

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
           AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCD+WS+GCILVELC+GEALFQTHENLEHLA
Sbjct: 247 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDLWSIGCILVELCSGEALFQTHENLEHLA 306

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
           MMER LGPLPEHMI RA+RG EKYFRRGSRLNWPEGAVSRESI+AVKKLDRLK M+S HV
Sbjct: 307 MMERVLGPLPEHMILRANRGAEKYFRRGSRLNWPEGAVSRESIRAVKKLDRLKLMISQHV 366

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
           D +RS+L DLLHGLL+YDPSERLTA QALNHPFF+
Sbjct: 367 DSSRSSLIDLLHGLLKYDPSERLTAWQALNHPFFK 401

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356515564|ref|XP_003526469.1| PREDICTED: serine/threonine-protein kinase AFC3-like [Glycine max]

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 333/396 (84%), Positives = 363/396 (91%), Gaps = 4/396 (1%)

Query: 2   MEQERTTKRRRLAWDVAP-SEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNL 60
           +E+ERT KR RLAWDVAP S +EAQRAL V   G      KHVSPP+RDDDREGHYVFNL
Sbjct: 9   IERERTRKRPRLAWDVAPPSASEAQRALPV--PGDEGFERKHVSPPKRDDDREGHYVFNL 66

Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
           GENLTPRYKIL KMGEGTFGRVLECWDRQT+E VAIKVVRSIRKYRDAAM+EIDVLQ LA
Sbjct: 67  GENLTPRYKILGKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRDAAMLEIDVLQQLA 126

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           KND+G SS CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE
Sbjct: 127 KNDRG-SSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 185

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           SVAYMH+LRLIHTDLKPENILLVSSE++KLP YKR SS EM FRCLPKSSAIKLIDFGST
Sbjct: 186 SVAYMHELRLIHTDLKPENILLVSSEYVKLPSYKRISSDEMQFRCLPKSSAIKLIDFGST 245

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
           A+DNQNHSSIVSTRHYRAPE+ILGLGWSYPCD+WSVGCIL+ELC+GEALFQTHENLEHLA
Sbjct: 246 AYDNQNHSSIVSTRHYRAPEIILGLGWSYPCDLWSVGCILIELCSGEALFQTHENLEHLA 305

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
           MMER LGP+PEHMI R+++G EKYF+RGSRL WPEGAVSRESI AVKKL  LK++VS +V
Sbjct: 306 MMERVLGPIPEHMICRSNKGAEKYFKRGSRLRWPEGAVSRESISAVKKLGHLKDIVSRNV 365

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
           D +RS+LT+LLHGLL YDP++R+TARQAL+HPFFRN
Sbjct: 366 DSSRSSLTELLHGLLTYDPTKRITARQALDHPFFRN 401

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255551080|ref|XP_002516588.1| afc, putative [Ricinus communis] gi|223544408|gb|EEF45929.1| afc, putative [Ricinus communis]

 Score =  684 bits (1764), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 335/398 (84%), Positives = 364/398 (91%), Gaps = 4/398 (1%)

Query: 2   MEQERTTKRRRLAWDVAPSEAEAQRAL-VVGHEGATAAAAKHVSPPRRDDDREGHYVFNL 60
           +E+ER  KR RLAWDV PSE E QRAL +VG+EG T    +H SPPRRDDDREGHYVFNL
Sbjct: 9   VEKERVRKRPRLAWDVKPSEPEVQRALAIVGNEGPTT---RHASPPRRDDDREGHYVFNL 65

Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
           GENLTPRYKILSKMGEGTFGRVLECWDRQT+E VAIKVVRSIRKYRDAAMIE+D+LQ +A
Sbjct: 66  GENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRDAAMIEVDILQKIA 125

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           KND+  +S CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE
Sbjct: 126 KNDQISTSRCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 185

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           SVAYMHDLRLIHTDLKPENILLVSSEFIK+PG KR+SS E  FR LPKSSAIKLIDFGST
Sbjct: 186 SVAYMHDLRLIHTDLKPENILLVSSEFIKVPGCKRNSSDETHFRFLPKSSAIKLIDFGST 245

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
           A+DNQNHSSIVSTRHYRAPEVILGLGWSYPCD+WSVGCILVELC+GEALFQTHENLEHLA
Sbjct: 246 AYDNQNHSSIVSTRHYRAPEVILGLGWSYPCDLWSVGCILVELCSGEALFQTHENLEHLA 305

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
           MMER LGPLP+HMIR A+RG E YFR  SRLNWPEGAVSRESI+AVKKLDRLK+M+S  V
Sbjct: 306 MMERVLGPLPDHMIRNANRGAEIYFRGASRLNWPEGAVSRESIRAVKKLDRLKDMISQQV 365

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
           +R+R+ L +LLHGLL+Y+PSERLTA+QALNHPFF+NL 
Sbjct: 366 ERSRTLLIELLHGLLKYEPSERLTAQQALNHPFFKNLT 403

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449499304|ref|XP_004160781.1| PREDICTED: serine/threonine-protein kinase AFC3-like [Cucumis sativus]

 Score =  654 bits (1686), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/396 (81%), Positives = 353/396 (89%), Gaps = 6/396 (1%)

Query: 3   EQERTTKRR-RLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLG 61
           EQ+RTT++R R AWDV P   EA +AL V          +HVSPPRRDDDREGHYVFNLG
Sbjct: 9   EQQRTTRKRPRSAWDVVPPAQEANKALAV----VKNEVKRHVSPPRRDDDREGHYVFNLG 64

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           ENLTPRYKILSKMGEGTFGRVLECWDRQT+E VAIKVVRSIRKYRDAAM+E+D+L+HLA+
Sbjct: 65  ENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRDAAMVEVDILKHLAQ 124

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
           N+ G S  CVQIR WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES
Sbjct: 125 NEMG-SLCCVQIRTWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 183

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           VAYMHDL LIHTDLKPENILLVSSE+IKLPG KR SS E  FRCLPKSSAIKLIDFGSTA
Sbjct: 184 VAYMHDLHLIHTDLKPENILLVSSEYIKLPGCKRVSSDETQFRCLPKSSAIKLIDFGSTA 243

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
           FDN+NHSSIVSTRHYRAPEVILGLGWSYPCD+WS+GCILVELC+G+ALFQTHENLEHLAM
Sbjct: 244 FDNENHSSIVSTRHYRAPEVILGLGWSYPCDLWSIGCILVELCSGKALFQTHENLEHLAM 303

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           MER LGPLP HMI+ A +  EKYF+RG RLNWPEGAVSRESI+AVKKLDRLK+MVS +V 
Sbjct: 304 MERVLGPLPGHMIQSADQNAEKYFKRGLRLNWPEGAVSRESIRAVKKLDRLKDMVSQYVG 363

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
            +RS LTDLL+ LL+YDPSER TARQALNHPFF+++
Sbjct: 364 FSRSLLTDLLYDLLKYDPSERPTARQALNHPFFKSI 399

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449442024|ref|XP_004138782.1| PREDICTED: serine/threonine-protein kinase AFC3-like [Cucumis sativus]

 Score =  652 bits (1683), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/396 (81%), Positives = 353/396 (89%), Gaps = 6/396 (1%)

Query: 3   EQERTTKRR-RLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLG 61
           EQ+RT+++R R AWDV P   EA +AL V          +HVSPPRRDDDREGHYVFNLG
Sbjct: 9   EQQRTSRKRPRSAWDVVPPAQEANKALAV----VKNEVKRHVSPPRRDDDREGHYVFNLG 64

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           ENLTPRYKILSKMGEGTFGRVLECWDRQT+E VAIKVVRSIRKYRDAAM+E+D+L+HLA+
Sbjct: 65  ENLTPRYKILSKMGEGTFGRVLECWDRQTREYVAIKVVRSIRKYRDAAMVEVDILKHLAQ 124

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
           N+ G S  CVQIR WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES
Sbjct: 125 NEMG-SLCCVQIRTWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 183

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           VAYMHDL LIHTDLKPENILLVSSE+IKLPG KR SS E  FRCLPKSSAIKLIDFGSTA
Sbjct: 184 VAYMHDLHLIHTDLKPENILLVSSEYIKLPGCKRVSSDETQFRCLPKSSAIKLIDFGSTA 243

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
           FDN+NHSSIVSTRHYRAPEVILGLGWSYPCD+WS+GCILVELC+G+ALFQTHENLEHLAM
Sbjct: 244 FDNENHSSIVSTRHYRAPEVILGLGWSYPCDLWSIGCILVELCSGKALFQTHENLEHLAM 303

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           MER LGPLP HMI+ A +  EKYF+RG RLNWPEGAVSRESI+AVKKLDRLK+MVS +V 
Sbjct: 304 MERVLGPLPGHMIQSADQNAEKYFKRGLRLNWPEGAVSRESIRAVKKLDRLKDMVSQYVG 363

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
            +RS LTDLL+ LL+YDPSER TARQALNHPFF+++
Sbjct: 364 FSRSLLTDLLYDLLKYDPSERPTARQALNHPFFKSI 399

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430077|ref|XP_002284488.1| PREDICTED: serine/threonine-protein kinase AFC3 [Vitis vinifera] gi|296081920|emb|CBI20925.3| unnamed protein product [Vitis vinifera]

 Score =  649 bits (1675), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/386 (83%), Positives = 341/386 (88%), Gaps = 8/386 (2%)

Query: 13  LAWDVAPSEA-EAQR-ALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKI 70
           LAWDVAPS+  EA R    V HE     + +  SPPRRDDDREGHYVF LGENLTPRYKI
Sbjct: 21  LAWDVAPSQQREADRLPTAVNHE-----SLRRQSPPRRDDDREGHYVFGLGENLTPRYKI 75

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           LSKMGEGTFGRVLECWDR T+E VAIKVVRSI KYRDAAM+EI VLQ L KNDK     C
Sbjct: 76  LSKMGEGTFGRVLECWDRDTREYVAIKVVRSISKYRDAAMVEIGVLQQLVKNDKC-RLRC 134

Query: 131 VQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
           VQI++WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY+HDL L
Sbjct: 135 VQIQHWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYVHDLCL 194

Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSI 250
           IHTDLKPENILLVSSE IKLP  KR SS E  FRCLPKSSAIKLIDFGSTA+DNQNHSSI
Sbjct: 195 IHTDLKPENILLVSSECIKLPSSKRFSSDETHFRCLPKSSAIKLIDFGSTAYDNQNHSSI 254

Query: 251 VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLP 310
           VSTRHYRAPEVILGLGWSYPCD+WSVGCILVELC GEALFQTHENLEHLAMMER LGPLP
Sbjct: 255 VSTRHYRAPEVILGLGWSYPCDLWSVGCILVELCVGEALFQTHENLEHLAMMERVLGPLP 314

Query: 311 EHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
           EHMIRRASR  EKYFR GSRLNWPEGAVSRESI+AVKKLDRLK+MV  HV  +RS+LTDL
Sbjct: 315 EHMIRRASRSVEKYFRGGSRLNWPEGAVSRESIRAVKKLDRLKDMVLQHVGSSRSSLTDL 374

Query: 371 LHGLLRYDPSERLTARQALNHPFFRN 396
           L+GLL++DP++RLTARQALNHPFF+N
Sbjct: 375 LYGLLKFDPAQRLTARQALNHPFFKN 400

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466609|ref|XP_003603589.1| Serine/threonine protein kinase AFC3 [Medicago truncatula] gi|355492637|gb|AES73840.1| Serine/threonine protein kinase AFC3 [Medicago truncatula] gi|388520185|gb|AFK48154.1| unknown [Medicago truncatula]

 Score =  639 bits (1649), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 316/400 (79%), Positives = 351/400 (87%), Gaps = 10/400 (2%)

Query: 1   MMEQERTTKRRRLAWDVAP----SEAEAQRAL-VVGHEGATAAAAKHVSPPRRDDDREGH 55
            ME+ERT KR RLAWD A     S  +  R L VVG +G      K+ SPPRRDDDR+GH
Sbjct: 5   FMERERTRKRPRLAWDAAAAPPPSIPKVPRNLAVVGDDGI---ERKYASPPRRDDDRDGH 61

Query: 56  YVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDV 115
           YVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQT++ VAIKV+RSI+KYRDAAMIE+DV
Sbjct: 62  YVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTRDYVAIKVIRSIKKYRDAAMIEVDV 121

Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 175
           L+ L K+D G SS CVQI NWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG
Sbjct: 122 LERLVKSDVGCSS-CVQILNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 180

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           RQLLESVA+MH+LRLIHTDLKPENILLVSS+++KLP  KR  S E  FRCLPKSSAIKLI
Sbjct: 181 RQLLESVAFMHELRLIHTDLKPENILLVSSDYVKLPSCKRVMSDETQFRCLPKSSAIKLI 240

Query: 236 DFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           DFGSTAF NQ+HSSIVSTRHYRAPEVILGLGWS PCD+WSVGCIL+ELCTG ALFQTHEN
Sbjct: 241 DFGSTAFANQSHSSIVSTRHYRAPEVILGLGWSSPCDLWSVGCILIELCTGGALFQTHEN 300

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           LEHLAMMER LGPLPEHM++R S+GTEKYF+RGSRL WPEGAVSRESI AVKKL  LK++
Sbjct: 301 LEHLAMMERVLGPLPEHMVQR-SKGTEKYFKRGSRLRWPEGAVSRESINAVKKLGDLKDI 359

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
           +S HV+ +RS+LTDLL+GLL Y+PS+R+TARQAL+HPFFR
Sbjct: 360 ISRHVESSRSSLTDLLYGLLTYEPSKRITARQALDHPFFR 399

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357466607|ref|XP_003603588.1| Serine/threonine protein kinase AFC3 [Medicago truncatula] gi|355492636|gb|AES73839.1| Serine/threonine protein kinase AFC3 [Medicago truncatula]

 Score =  637 bits (1642), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 315/400 (78%), Positives = 349/400 (87%), Gaps = 12/400 (3%)

Query: 1   MMEQERTTKRRRLAWDVAP----SEAEAQRAL-VVGHEGATAAAAKHVSPPRRDDDREGH 55
            ME+ERT KR RLAWD A     S  +  R L VVG +G      K+ SPPRRDDDR+GH
Sbjct: 5   FMERERTRKRPRLAWDAAAAPPPSIPKVPRNLAVVGDDGI---ERKYASPPRRDDDRDGH 61

Query: 56  YVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDV 115
           YVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQT++ VAIKV+RSI+KYRDAAMIE+DV
Sbjct: 62  YVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTRDYVAIKVIRSIKKYRDAAMIEVDV 121

Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 175
           L+ L K+D G SS CVQI NWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG
Sbjct: 122 LERLVKSDVGCSS-CVQILNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 180

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           RQLLESVA+MH+LRLIHTDLKPENILLVSS+++KLP  KR  S E  FRCLPKSSAIKLI
Sbjct: 181 RQLLESVAFMHELRLIHTDLKPENILLVSSDYVKLPSCKRVMSDETQFRCLPKSSAIKLI 240

Query: 236 DFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           DFGSTAF NQ+HSSIVSTRHYRAPEVILGLGWS PCD+WSVGCIL+ELCTG ALFQTHEN
Sbjct: 241 DFGSTAFANQSHSSIVSTRHYRAPEVILGLGWSSPCDLWSVGCILIELCTGGALFQTHEN 300

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           LEHLAMMER LGPLPEHM++   RGTEKYF+RGSRL WPEGAVSRESI AVKKL  LK++
Sbjct: 301 LEHLAMMERVLGPLPEHMVQ---RGTEKYFKRGSRLRWPEGAVSRESINAVKKLGDLKDI 357

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
           +S HV+ +RS+LTDLL+GLL Y+PS+R+TARQAL+HPFFR
Sbjct: 358 ISRHVESSRSSLTDLLYGLLTYEPSKRITARQALDHPFFR 397

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15233872|ref|NP_194992.1| serine/threonine-protein kinase AFC3 [Arabidopsis thaliana] gi|5915680|sp|P51568.2|AFC3_ARATH RecName: Full=Serine/threonine-protein kinase AFC3 gi|642134|dbj|BAA08216.1| protein kinase [Arabidopsis thaliana] gi|3063704|emb|CAA18595.1| protein kinase AME3 [Arabidopsis thaliana] gi|7270170|emb|CAB79983.1| protein kinase AME3 [Arabidopsis thaliana] gi|119935963|gb|ABM06046.1| At4g32660 [Arabidopsis thaliana] gi|332660700|gb|AEE86100.1| serine/threonine-protein kinase AFC3 [Arabidopsis thaliana]

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/395 (75%), Positives = 342/395 (86%), Gaps = 5/395 (1%)

Query: 2   MEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLG 61
           M++ER  KR R+ WD AP+E EA+RA++ GH     +  + +SPP RDDDR+GHYVF+L 
Sbjct: 9   MDKERVRKRPRMTWDEAPAEPEAKRAVIKGH----GSDGRILSPPLRDDDRDGHYVFSLR 64

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           +NLTPRYKILSKMGEGTFGRVLECWDR T+E VAIK++RSI+KYRDAAMIEIDVLQ L K
Sbjct: 65  DNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVK 124

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
           +DKG  + CVQ++NWFDYRNHICIVFEKLGPSLFDFLKRNKY  FP+ LVR+FG QLLES
Sbjct: 125 SDKG-RTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQLLES 183

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           VAYMH+L+L+HTDLKPENILLVSSE +KLP  KRS++ E  FRCLPKSSAIKLIDFGST 
Sbjct: 184 VAYMHELQLVHTDLKPENILLVSSENVKLPDNKRSAANETHFRCLPKSSAIKLIDFGSTV 243

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
            DN+ H SIV TRHYR+PEVILGLGWSY CD+WS+GCIL ELCTGEALFQTH+NLEHLAM
Sbjct: 244 CDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAM 303

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           MERALGPLPEHM R+ASRG EKYFRRG RLNWPEGA SRESI+AVK+LDRLK+MVS HVD
Sbjct: 304 MERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVD 363

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
             RS   DLL+GLL YDPSERLTA +AL+HPFF++
Sbjct: 364 NTRSRFADLLYGLLAYDPSERLTANEALDHPFFKS 398

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|79326149|ref|NP_001031774.1| serine/threonine-protein kinase AFC3 [Arabidopsis thaliana] gi|332660701|gb|AEE86101.1| serine/threonine-protein kinase AFC3 [Arabidopsis thaliana]

 Score =  627 bits (1618), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 299/395 (75%), Positives = 342/395 (86%), Gaps = 5/395 (1%)

Query: 2   MEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLG 61
           M++ER  KR R+ WD AP+E EA+RA++ GH     +  + +SPP RDDDR+GHYVF+L 
Sbjct: 1   MDKERVRKRPRMTWDEAPAEPEAKRAVIKGH----GSDGRILSPPLRDDDRDGHYVFSLR 56

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           +NLTPRYKILSKMGEGTFGRVLECWDR T+E VAIK++RSI+KYRDAAMIEIDVLQ L K
Sbjct: 57  DNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVK 116

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
           +DKG  + CVQ++NWFDYRNHICIVFEKLGPSLFDFLKRNKY  FP+ LVR+FG QLLES
Sbjct: 117 SDKG-RTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQLLES 175

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           VAYMH+L+L+HTDLKPENILLVSSE +KLP  KRS++ E  FRCLPKSSAIKLIDFGST 
Sbjct: 176 VAYMHELQLVHTDLKPENILLVSSENVKLPDNKRSAANETHFRCLPKSSAIKLIDFGSTV 235

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
            DN+ H SIV TRHYR+PEVILGLGWSY CD+WS+GCIL ELCTGEALFQTH+NLEHLAM
Sbjct: 236 CDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAM 295

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           MERALGPLPEHM R+ASRG EKYFRRG RLNWPEGA SRESI+AVK+LDRLK+MVS HVD
Sbjct: 296 MERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVD 355

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
             RS   DLL+GLL YDPSERLTA +AL+HPFF++
Sbjct: 356 NTRSRFADLLYGLLAYDPSERLTANEALDHPFFKS 390

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	399
TAIR|locus:2125622	400	AME3 [Arabidopsis thaliana (ta	0.977	0.975	0.756	7.1e-164
TAIR|locus:2084006	467	FC1 "FUS3-complementing gene 1	0.889	0.760	0.735	2e-147
TAIR|locus:2121984	427	FC2 "FUS3-complementing gene 2	0.884	0.826	0.688	3e-144
POMBASE|SPAC1D4.11c	690	lkh1 "dual specificity protein	0.922	0.533	0.473	9.3e-91
ASPGD|ASPL0000062305	667	AN0988 [Emericella nidulans (t	0.862	0.515	0.495	8.3e-90
UNIPROTKB|F1RLJ5	500	CLK2 "Uncharacterized protein"	0.847	0.676	0.48	1.4e-87
UNIPROTKB|E1B9Q2	500	CLK2 "Uncharacterized protein"	0.847	0.676	0.48	1.8e-87
UNIPROTKB|F1P919	612	CLK2 "Uncharacterized protein"	0.847	0.552	0.48	1.8e-87
UNIPROTKB|B1AVT0	497	CLK2 "Dual-specificity protein	0.847	0.680	0.48	1.8e-87
UNIPROTKB|P49760	499	CLK2 "Dual specificity protein	0.847	0.677	0.48	1.8e-87

TAIR|locus:2125622 AME3 [Arabidopsis thaliana (taxid:3702)]

 Score = 1595 (566.5 bits), Expect = 7.1e-164, P = 7.1e-164
 Identities = 299/395 (75%), Positives = 342/395 (86%)

Query:     2 MEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLG 61
             M++ER  KR R+ WD AP+E EA+RA++ GH     +  + +SPP RDDDR+GHYVF+L 
Sbjct:     9 MDKERVRKRPRMTWDEAPAEPEAKRAVIKGH----GSDGRILSPPLRDDDRDGHYVFSLR 64

Query:    62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
             +NLTPRYKILSKMGEGTFGRVLECWDR T+E VAIK++RSI+KYRDAAMIEIDVLQ L K
Sbjct:    65 DNLTPRYKILSKMGEGTFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVK 124

Query:   122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             +DKG  + CVQ++NWFDYRNHICIVFEKLGPSLFDFLKRNKY  FP+ LVR+FG QLLES
Sbjct:   125 SDKG-RTRCVQMKNWFDYRNHICIVFEKLGPSLFDFLKRNKYSAFPLALVRDFGCQLLES 183

Query:   182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             VAYMH+L+L+HTDLKPENILLVSSE +KLP  KRS++ E  FRCLPKSSAIKLIDFGST 
Sbjct:   184 VAYMHELQLVHTDLKPENILLVSSENVKLPDNKRSAANETHFRCLPKSSAIKLIDFGSTV 243

Query:   242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
              DN+ H SIV TRHYR+PEVILGLGWSY CD+WS+GCIL ELCTGEALFQTH+NLEHLAM
Sbjct:   244 CDNRIHHSIVQTRHYRSPEVILGLGWSYQCDLWSIGCILFELCTGEALFQTHDNLEHLAM 303

Query:   302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
             MERALGPLPEHM R+ASRG EKYFRRG RLNWPEGA SRESI+AVK+LDRLK+MVS HVD
Sbjct:   304 MERALGPLPEHMTRKASRGAEKYFRRGCRLNWPEGANSRESIRAVKRLDRLKDMVSKHVD 363

Query:   362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
               RS   DLL+GLL YDPSERLTA +AL+HPFF++
Sbjct:   364 NTRSRFADLLYGLLAYDPSERLTANEALDHPFFKS 398

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005737 "cytoplasm" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

TAIR|locus:2084006 FC1 "FUS3-complementing gene 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 1412 (502.1 bits), Expect = 2.0e-147, Sum P(2) = 2.0e-147
 Identities = 264/359 (73%), Positives = 306/359 (85%)

Query:    44 SPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR 103
             SPP R DD++GHYVF +G+ LTPRY+ILSKMGEGTFG+VLEC+D + +E VAIKV+RSI 
Sbjct:    91 SPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEGTFGQVLECFDNKNKEVVAIKVIRSIN 150

Query:   104 KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKY 163
             KYR+AAMIEIDVLQ L ++D GGS  CVQIRNWFDYRNHICIVFEKLGPSL+DFL++N Y
Sbjct:   151 KYREAAMIEIDVLQRLTRHDVGGS-RCVQIRNWFDYRNHICIVFEKLGPSLYDFLRKNSY 209

Query:   164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK---RSSSGE 220
               FP+DLVRE GRQLLESVAYMHDLRLIHTDLKPENILLVSSE+IK+P YK   R +   
Sbjct:   210 RSFPIDLVRELGRQLLESVAYMHDLRLIHTDLKPENILLVSSEYIKIPDYKFLSRPTKDG 269

Query:   221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
               F+ LPKSSAIKLIDFGST F++Q+H+ IVSTRHYRAPEVILG+GW+YPCD+WS+GCIL
Sbjct:   270 SYFKNLPKSSAIKLIDFGSTTFEHQDHNYIVSTRHYRAPEVILGVGWNYPCDLWSIGCIL 329

Query:   281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR 340
             VELC+GEALFQTHENLEHLAMMER LGPLP HM+ RA R +EKYFRRG++L+WPEGA SR
Sbjct:   330 VELCSGEALFQTHENLEHLAMMERVLGPLPPHMVLRADRRSEKYFRRGAKLDWPEGATSR 389

Query:   341 ESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
             +S+KAV KL RL N++  HVD +   L DLL GLLRYDP+ER  AR+ALNHPFF    E
Sbjct:   390 DSLKAVWKLPRLPNLIMQHVDHSAGDLIDLLQGLLRYDPTERFKAREALNHPFFTRSRE 448

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0005739 "mitochondrion" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0045727 "positive regulation of translation" evidence=RCA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2121984 FC2 "FUS3-complementing gene 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 1359 (483.5 bits), Expect = 3.0e-144, Sum P(2) = 3.0e-144
 Identities = 245/356 (68%), Positives = 306/356 (85%)

Query:    40 AKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV 99
             A++ SPP R+DD++GHY+F LG++LTPRYKI SKMGEGTFG+VLECWDR+ +E VA+K+V
Sbjct:    70 ARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEGTFGQVLECWDRERKEMVAVKIV 129

Query:   100 RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLK 159
             R ++KYR+AAMIEI++LQ L K+DKGG+  CVQIRNWFDYRNHICIVFEKLG SL+DFL+
Sbjct:   130 RGVKKYREAAMIEIEMLQQLGKHDKGGN-RCVQIRNWFDYRNHICIVFEKLGSSLYDFLR 188

Query:   160 RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS-S 218
             +N Y  FP+DLVRE G QLLE VA+MHDLR+IHTDLKPENILLVSS+++K+P YK S   
Sbjct:   189 KNNYRSFPIDLVREIGWQLLECVAFMHDLRMIHTDLKPENILLVSSDYVKIPEYKGSRLQ 248

Query:   219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGC 278
              ++ ++ +PKSSAIK+IDFGST ++ Q+ + IVSTRHYRAPEVILGLGWSYPCD+WSVGC
Sbjct:   249 RDVCYKRVPKSSAIKVIDFGSTTYERQDQTYIVSTRHYRAPEVILGLGWSYPCDVWSVGC 308

Query:   279 ILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAV 338
             I+VELCTGEALFQTHENLEHLAMMER LGP P+ M+++  R +EKY RRG RL+WP+GA 
Sbjct:   309 IIVELCTGEALFQTHENLEHLAMMERVLGPFPQQMLKKVDRHSEKYVRRG-RLDWPDGAT 367

Query:   339 SRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
             SR+S+KAV KL RL+N++  HVD +   L +++ GLLR+DPSER+TAR+AL HPFF
Sbjct:   368 SRDSLKAVLKLPRLQNLIMQHVDHSAGELINMVQGLLRFDPSERITAREALRHPFF 423

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0016301 "kinase activity" evidence=ISS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0006397 "mRNA processing" evidence=IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0045727 "positive regulation of translation" evidence=RCA

POMBASE|SPAC1D4.11c lkh1 "dual specificity protein kinase Lkh1" [Schizosaccharomyces pombe (taxid:4896)]

 Score = 905 (323.6 bits), Expect = 9.3e-91, P = 9.3e-91
 Identities = 184/389 (47%), Positives = 256/389 (65%)

Query:     9 KRRRLAWDVAPSEAEAQRALV-VGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPR 67
             KR+R AW   P   +  R  V V H+  T A      P   DDD +GHY          R
Sbjct:   312 KRKRAAW---PPYKKVDRVNVPVVHD--TTA----FDPSTFDDD-DGHYKVVPNSKFANR 361

Query:    68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
             Y ++  +G GTFG+V++C+D+ T    AIKV R+I KYR+A++IE+ VLQ +A +D    
Sbjct:   362 YTVVRLLGHGTFGKVIQCYDQSTGRHCAIKVTRAIPKYREASLIELRVLQTIAHSDPTNE 421

Query:   128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
             + C+Q+R++FDYR HICIV +  G S+FDFLK N Y PFP+  ++   +QL +SVA++H 
Sbjct:   422 NKCIQLRDYFDYRKHICIVTDLFGWSVFDFLKNNNYIPFPLKHIQMLSQQLFKSVAFLHS 481

Query:   188 LRLIHTDLKPENILLVS--SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
             L L+HTDLKPEN+LLVS  S  I+LP Y+  S   +       S  I+LIDFGS  F+++
Sbjct:   482 LGLVHTDLKPENVLLVSNASRTIRLP-YRNYSQKVL------NSCEIRLIDFGSATFEDE 534

Query:   246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
              HSS+VSTRHYRAPE+ILGLGWSYPCD+WS+GCILVEL TG+ALFQTHE+ EHL MME+ 
Sbjct:   535 YHSSVVSTRHYRAPEIILGLGWSYPCDVWSIGCILVELFTGQALFQTHEDSEHLCMMEKI 594

Query:   306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS 365
             LGP   +MI R+SR ++++F+   ++ +P     ++SI  ++ L  L+ + ++      +
Sbjct:   595 LGPFDRNMISRSSRTSQRFFKSDGKVRYPLSNTPKKSINYLQSLQTLEQIFAVSSPEV-A 653

Query:   366 TLTDLLHGLLRYDPSERLTARQALNHPFF 394
              L DLL  +  YDP  R+TA++AL HPFF
Sbjct:   654 LLLDLLKKVFVYDPKRRITAKEALWHPFF 682

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IMP;IDA

GO:0006468 "protein phosphorylation" evidence=IC

GO:0010590 "regulation of cytokinetic cell separation" evidence=IMP

GO:0032955 "regulation of barrier septum assembly" evidence=IMP

GO:0034599 "cellular response to oxidative stress" evidence=IMP

GO:0035556 "intracellular signal transduction" evidence=TAS

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IMP

GO:0051519 "activation of bipolar cell growth" evidence=IMP

GO:0060237 "regulation of fungal-type cell wall organization" evidence=IMP

GO:0060257 "negative regulation of flocculation" evidence=IMP

GO:0060258 "negative regulation of filamentous growth" evidence=IMP

ASPGD|ASPL0000062305 AN0988 [Emericella nidulans (taxid:162425)]

 Score = 896 (320.5 bits), Expect = 8.3e-90, P = 8.3e-90
 Identities = 179/361 (49%), Positives = 243/361 (67%)

Query:    50 DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA 109
             DD +GHY+ N    +T RY I+  +G+GTFG+V+E +D+Q + R AIK++RSI+KYRDA+
Sbjct:   283 DDDDGHYIVNPNTPITDRYSIIKLLGQGTFGKVVEAYDKQRKARCAIKIIRSIQKYRDAS 342

Query:   110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
              IE+ VL  LA NDK   + C+ +R+ FD+RNHICIV + LG S+FDFLK N + PFP  
Sbjct:   343 RIELRVLSTLASNDKHNRNKCIHLRDCFDFRNHICIVTDLLGQSVFDFLKGNGFVPFPSS 402

Query:   170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK------LPGYKRSSSGEMPF 223
              ++ F RQL  SVA++HDL LIHTDLKPENILLV + +        +P    + S     
Sbjct:   403 QIQSFARQLFTSVAFLHDLNLIHTDLKPENILLVKNAYQTFTYNRTIPSSSTAISRNARQ 462

Query:   224 RCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
             R +   S I+LIDFGS  FD++ HSS+VSTRHYRAPE+IL LGWS+PCD+WS+GCILVE 
Sbjct:   463 RRVLLDSEIRLIDFGSATFDDEYHSSVVSTRHYRAPEIILNLGWSFPCDIWSIGCILVEF 522

Query:   284 CTGEALFQTHENLEHLAMMERALGP-LPEHMIRRASRG--------TEKYFRRGSRLNWP 334
              TG+ALFQTH+NLEHLAMME  +G  +   ++R+  +G          KYF R +RL++P
Sbjct:   523 FTGDALFQTHDNLEHLAMMEAVIGERIDPKLVRQVMQGGRNGNQNQAAKYFVR-NRLDYP 581

Query:   335 EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                 +R S K V+ + RL + +  +    R  L DLL  +  YDP +R+TA+ AL HP+F
Sbjct:   582 NEETTRASKKYVQAMRRLTSFMPTNTKFYRLFL-DLLQRIFVYDPKQRITAKDALKHPWF 640

Query:   395 R 395
             +
Sbjct:   641 K 641

GO:0005634 "nucleus" evidence=IEA

GO:0048026 "positive regulation of mRNA splicing, via spliceosome" evidence=IEA

GO:0060258 "negative regulation of filamentous growth" evidence=IEA

GO:0060237 "regulation of fungal-type cell wall organization" evidence=IEA

GO:0034599 "cellular response to oxidative stress" evidence=IEA

GO:0010590 "regulation of cytokinetic cell separation" evidence=IEA

GO:0051519 "activation of bipolar cell growth" evidence=IEA

GO:0060257 "negative regulation of flocculation" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1RLJ5 CLK2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 875 (313.1 bits), Expect = 1.4e-87, P = 1.4e-87
 Identities = 168/350 (48%), Positives = 241/350 (68%)

Query:    49 DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVRSIRKYRD 107
             +DD EGH ++++G+ L  RY+I+S +GEGTFGRV++C D R+   RVA+K+++++ KY++
Sbjct:   144 EDDAEGHLIYHVGDWLQERYEIISTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 203

Query:   108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
             AA +EI+VL+ + + D    + CVQ+ +WFDY  H+CI FE LG S FDFLK N Y P+P
Sbjct:   204 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 263

Query:   168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
             +  VR    QL ++V ++HD +L HTDLKPENIL V+S++ +L         E   R + 
Sbjct:   264 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY-ELTYNLEKKRDE---RSV- 318

Query:   228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
             KS+A++++DFGS  FD+++HS+IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   G 
Sbjct:   319 KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 378

Query:   288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
              LFQTH+N EHLAMMER LGP+P  MIR+  +  +KYF RG RL+W E   +   ++  +
Sbjct:   379 TLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVR--E 433

Query:   348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                 L+  ++   +     L DL+  +L Y+P++RLT  +AL HPFF  L
Sbjct:   434 NCKPLRRYLTSEAEEHHQ-LFDLIESMLEYEPAKRLTLGEALQHPFFARL 482

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E1B9Q2 CLK2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 168/350 (48%), Positives = 241/350 (68%)

Query:    49 DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVRSIRKYRD 107
             +DD EGH ++++G+ L  RY+I+S +GEGTFGRV++C D R+   RVA+K+++++ KY++
Sbjct:   144 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 203

Query:   108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
             AA +EI+VL+ + + D    + CVQ+ +WFDY  H+CI FE LG S FDFLK N Y P+P
Sbjct:   204 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 263

Query:   168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
             +  VR    QL ++V ++HD +L HTDLKPENIL V+S++ +L         E   R + 
Sbjct:   264 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY-ELTYNLEKKRDE---RSV- 318

Query:   228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
             KS+A++++DFGS  FD+++HS+IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   G 
Sbjct:   319 KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 378

Query:   288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
              LFQTH+N EHLAMMER LGP+P  MIR+  +  +KYF RG RL+W E   +   ++  +
Sbjct:   379 TLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVR--E 433

Query:   348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                 L+  ++   +     L DL+  +L Y+P++RLT  +AL HPFF  L
Sbjct:   434 NCKPLRRYLTSEAEEHHQ-LFDLIESMLEYEPAKRLTLGEALQHPFFARL 482

GO:0046777 "protein autophosphorylation" evidence=IEA

GO:0045721 "negative regulation of gluconeogenesis" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0010212 "response to ionizing radiation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|F1P919 CLK2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 168/350 (48%), Positives = 241/350 (68%)

Query:    49 DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVRSIRKYRD 107
             +DD EGH ++++G+ L  RY+I+S +GEGTFGRV++C D R+   RVA+K+++++ KY++
Sbjct:   256 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 315

Query:   108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
             AA +EI+VL+ + + D    + CVQ+ +WFDY  H+CI FE LG S FDFLK N Y P+P
Sbjct:   316 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 375

Query:   168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
             +  VR    QL ++V ++HD +L HTDLKPENIL V+S++ +L         E   R + 
Sbjct:   376 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY-ELTYNLEKKRDE---RSV- 430

Query:   228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
             KS+A++++DFGS  FD+++HS+IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   G 
Sbjct:   431 KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 490

Query:   288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
              LFQTH+N EHLAMMER LGP+P  MIR+  +  +KYF RG RL+W E   +   ++  +
Sbjct:   491 TLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVR--E 545

Query:   348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                 L+  ++   +     L DL+  +L Y+P++RLT  +AL HPFF  L
Sbjct:   546 NCKPLRRYLTSEAEEHHQ-LFDLIESMLEYEPAKRLTLGEALQHPFFARL 594

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|B1AVT0 CLK2 "Dual-specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 168/350 (48%), Positives = 241/350 (68%)

Query:    49 DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVRSIRKYRD 107
             +DD EGH ++++G+ L  RY+I+S +GEGTFGRV++C D R+   RVA+K+++++ KY++
Sbjct:   142 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 201

Query:   108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
             AA +EI+VL+ + + D    + CVQ+ +WFDY  H+CI FE LG S FDFLK N Y P+P
Sbjct:   202 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 261

Query:   168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
             +  VR    QL ++V ++HD +L HTDLKPENIL V+S++ +L         E   R + 
Sbjct:   262 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY-ELTYNLEKKRDE---RSV- 316

Query:   228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
             KS+A++++DFGS  FD+++HS+IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   G 
Sbjct:   317 KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 376

Query:   288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
              LFQTH+N EHLAMMER LGP+P  MIR+  +  +KYF RG RL+W E   +   ++  +
Sbjct:   377 TLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVR--E 431

Query:   348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                 L+  ++   +     L DL+  +L Y+P++RLT  +AL HPFF  L
Sbjct:   432 NCKPLRRYLTSEAEEHHQ-LFDLIESMLEYEPAKRLTLGEALQHPFFARL 480

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|P49760 CLK2 "Dual specificity protein kinase CLK2" [Homo sapiens (taxid:9606)]

 Score = 874 (312.7 bits), Expect = 1.8e-87, P = 1.8e-87
 Identities = 168/350 (48%), Positives = 241/350 (68%)

Query:    49 DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVRSIRKYRD 107
             +DD EGH ++++G+ L  RY+I+S +GEGTFGRV++C D R+   RVA+K+++++ KY++
Sbjct:   144 EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 203

Query:   108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
             AA +EI+VL+ + + D    + CVQ+ +WFDY  H+CI FE LG S FDFLK N Y P+P
Sbjct:   204 AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 263

Query:   168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
             +  VR    QL ++V ++HD +L HTDLKPENIL V+S++ +L         E   R + 
Sbjct:   264 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDY-ELTYNLEKKRDE---RSV- 318

Query:   228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
             KS+A++++DFGS  FD+++HS+IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   G 
Sbjct:   319 KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 378

Query:   288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
              LFQTH+N EHLAMMER LGP+P  MIR+  +  +KYF RG RL+W E   +   ++  +
Sbjct:   379 TLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVR--E 433

Query:   348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                 L+  ++   +     L DL+  +L Y+P++RLT  +AL HPFF  L
Sbjct:   434 NCKPLRRYLTSEAEEHHQ-LFDLIESMLEYEPAKRLTLGEALQHPFFARL 482

GO:0005524 "ATP binding" evidence=IEA

GO:0004712 "protein serine/threonine/tyrosine kinase activity" evidence=IEA

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA

GO:0032526 "response to retinoic acid" evidence=IEA

GO:0016607 "nuclear speck" evidence=IEA

GO:0043484 "regulation of RNA splicing" evidence=IDA

GO:0010212 "response to ionizing radiation" evidence=IMP

GO:0006468 "protein phosphorylation" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0004674 "protein serine/threonine kinase activity" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0045721 "negative regulation of gluconeogenesis" evidence=ISS

GO:0046777 "protein autophosphorylation" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P51568	AFC3_ARATH	2, ., 7, ., 1, 2, ., 1	0.7569	0.9774	0.975	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.12.1	0.979
3rd Layer	2.7.12	0.983
3rd Layer	2.7.11	LOW CONFIDENCE prediction!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: gw1.VI.2070.1 hypothetical protein (353 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	399
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	5e-79
PTZ00284	467	PTZ00284, PTZ00284, protein kinase; Provisional	1e-76
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-65
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	4e-54
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-52
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	4e-50
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-49
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	6e-49
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	7e-47
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-45
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-42
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	8e-41
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	2e-40
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	3e-39
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	3e-39
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-38
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-37
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	3e-37
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	6e-36
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	7e-36
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-35
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	2e-35
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-35
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-34
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	1e-33
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	6e-33
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	1e-32
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-32
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-32
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	7e-32
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	7e-32
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-31
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	5e-31
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	1e-30
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	2e-30
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	9e-30
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	1e-29
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	4e-29
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	2e-28
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	2e-28
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	4e-28
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	9e-28
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	2e-27
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	2e-27
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-27
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-27
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-27
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	3e-27
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	3e-27
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	6e-27
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-26
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	4e-26
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	4e-26
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	6e-26
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	8e-26
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	9e-26
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	2e-25
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	4e-25
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-25
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	1e-24
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	7e-24
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	1e-23
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	2e-23
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-23
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	4e-23
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	2e-22
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-22
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	5e-22
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	5e-22
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	8e-22
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	2e-21
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-21
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	3e-21
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	3e-21
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	4e-20
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	4e-20
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	6e-20
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	6e-20
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	2e-19
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	3e-19
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	6e-19
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	7e-19
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	8e-19
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	2e-18
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	5e-18
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	8e-18
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	1e-17
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	2e-17
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	3e-17
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-17
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	4e-17
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	5e-17
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	6e-17
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	1e-16
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	2e-16
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	3e-16
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	5e-16
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	1e-15
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-15
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	2e-15
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	2e-15
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	3e-15
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	3e-15
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	4e-15
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	5e-15
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	5e-15
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	6e-15
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	6e-15
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	1e-14
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	1e-14
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-14
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	2e-14
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-14
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	3e-14
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	4e-14
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	6e-14
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	7e-14
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	8e-14
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	9e-14
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	9e-14
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	1e-13
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	1e-13
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	4e-13
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	7e-13
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	7e-13
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	7e-13
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	1e-12
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	1e-12
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	2e-12
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	2e-12
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	2e-12
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	2e-12
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	2e-12
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	3e-12
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	4e-12
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	5e-12
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	7e-12
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	7e-12
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	1e-11
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	2e-11
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	2e-11
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	3e-11
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	3e-11
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	6e-11
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	6e-11
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	8e-11
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	1e-10
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	1e-10
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-10
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	3e-10
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	4e-10
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	4e-10
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	5e-10
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	5e-10
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	5e-10
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	6e-10
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	6e-10
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	6e-10
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	7e-10
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	8e-10
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	8e-10
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	9e-10
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-09
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-09
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	2e-09
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	2e-09
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	2e-09
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	3e-09
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	3e-09
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	4e-09
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	4e-09
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	4e-09
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	4e-09
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	5e-09
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	7e-09
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	7e-09
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	8e-09
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	8e-09
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	8e-09
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	1e-08
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	1e-08
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	1e-08
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	1e-08
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	1e-08
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	1e-08
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	2e-08
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	2e-08
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	2e-08
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	2e-08
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-08
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	2e-08
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	2e-08
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	3e-08
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	3e-08
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	4e-08
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	6e-08
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	7e-08
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	7e-08
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	7e-08
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-07
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	2e-07
cd05073	260	cd05073, PTKc_Hck, Catalytic domain of the Protein	3e-07
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	3e-07
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	5e-07
cd05070	260	cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro	6e-07
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	6e-07
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	7e-07
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	8e-07
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	1e-06
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	1e-06
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	1e-06
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	1e-06
cd05071	262	cd05071, PTKc_Src, Catalytic domain of the Protein	2e-06
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	2e-06
cd05034	261	cd05034, PTKc_Src_like, Catalytic domain of Src ki	2e-06
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	3e-06
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	3e-06
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	4e-06
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	4e-06
cd05072	261	cd05072, PTKc_Lyn, Catalytic domain of the Protein	4e-06
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	5e-06
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	8e-06
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	1e-05
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	1e-05
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-05
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	2e-05
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	2e-05
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	8e-05
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	8e-05
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	2e-04
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	3e-04
cd08226	328	cd08226, PK_STRAD_beta, Pseudokinase domain of STE	3e-04
PHA02882	294	PHA02882, PHA02882, putative serine/threonine kina	9e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	0.001
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.001
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	0.002
cd05076	274	cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) do	0.002
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	0.002
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	0.003
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  243 bits (623), Expect = 5e-79
 Identities = 101/332 (30%), Positives = 149/332 (44%), Gaps = 83/332 (25%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDKG 125
           Y+IL K+GEG+FG+V    D++T + VAIKV++   I+K R+  + EI +L+ L      
Sbjct: 1   YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIKKKKIKKDRERILREIKILKKL------ 54

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
              + V++ + F+  + + +V E   G  LFD LK+        D  R + RQ+L ++ Y
Sbjct: 55  KHPNIVRLYDVFEDEDKLYLVMEYCEGGDLFDLLKKRG--RLSEDEARFYLRQILSALEY 112

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-- 242
           +H   ++H DLKPENILL                G            +KL DFG      
Sbjct: 113 LHSKGIVHRDLKPENILL-------------DEDGH-----------VKLADFGLARQLD 148

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
             +  ++ V T  Y APEV+LG G+    D+WS+G IL EL TG+  F   + L    + 
Sbjct: 149 PGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTGKPPFPGDDQLL--ELF 206

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
           ++   P P                       PE  +S E+                    
Sbjct: 207 KKIGKPKPPFP-------------------PPEWDISPEAK------------------- 228

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                 DL+  LL  DP +RLTA +AL HPFF
Sbjct: 229 ------DLIRKLLVKDPEKRLTAEEALQHPFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|140307 PTZ00284, PTZ00284, protein kinase; Provisional

 Score =  244 bits (625), Expect = 1e-76
 Identities = 150/411 (36%), Positives = 217/411 (52%), Gaps = 51/411 (12%)

Query: 8   TKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVS---PPRR---------DDDREGH 55
           +KR R       S            + AT     +V    PP++             EGH
Sbjct: 56  SKRDRETATSTDSGRTKSHEGAATTKQATTTPTTNVEVAPPPKKKKVTYALPNQSREEGH 115

Query: 56  YVFNLGENL---TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIE 112
           +   LGE++   T R+KILS +GEGTFG+V+E WDR+ +E  A+K+VR++ KY   A IE
Sbjct: 116 FYVVLGEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIE 175

Query: 113 IDVLQHLAKNDKGGSSHCVQIRNWF-DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLV 171
           I  ++ + + D       ++I+ +F +   H+CIV  K GP L D++   K+ PF    +
Sbjct: 176 IQFMEKVRQADPADRFPLMKIQRYFQNETGHMCIVMPKYGPCLLDWIM--KHGPFSHRHL 233

Query: 172 REFGRQLLESVAYMH-DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
            +   Q   ++ Y H +L L+HTDLKPENIL+ +S+ +  P   R+    +P    P   
Sbjct: 234 AQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRA----LP----PDPC 285

Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
            +++ D G    +  + ++IVSTRHYR+PEV+LGLGW Y  DMWS+GCI+ EL TG+ L+
Sbjct: 286 RVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLY 345

Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD 350
            TH+NLEHL +ME+ LG LP     R   GTE+     +RL +      R      K L 
Sbjct: 346 DTHDNLEHLHLMEKTLGRLPSEWAGRC--GTEE-----ARLLYNSAGQLRPC-TDPKHLA 397

Query: 351 RLKNMVSLHVDRARST--------LTDLLHGLLRYDPSERLTARQALNHPF 393
           R        + RAR          L DL++GLL YD  +RL ARQ   HP+
Sbjct: 398 R--------IARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPY 440

Length = 467

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  209 bits (533), Expect = 2e-65
 Identities = 91/335 (27%), Positives = 142/335 (42%), Gaps = 83/335 (24%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           Y++L K+G G+FG V +   + T + VA+K+++      K    A  EI +L+ L     
Sbjct: 1   YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRL----- 55

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
               + V++ + F+ ++H+ +V E      LFD+L R    P   D  ++   Q+L  + 
Sbjct: 56  -SHPNIVRLIDAFEDKDHLYLVMEYCEGGDLFDYLSRGG--PLSEDEAKKIALQILRGLE 112

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF- 242
           Y+H   +IH DLKPENILL                         ++  +K+ DFG     
Sbjct: 113 YLHSNGIIHRDLKPENILLD------------------------ENGVVKIADFGLAKKL 148

Query: 243 --DNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
              + + ++ V T  Y APEV+L G G+    D+WS+G IL EL TG+  F     L+ L
Sbjct: 149 LKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQL 208

Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
            ++ R LGP  E                    + P+                        
Sbjct: 209 QLIRRILGPPLE-------------------FDEPK------------------------ 225

Query: 360 VDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                    DL+   L  DPS+R TA + L HP+F
Sbjct: 226 WSSGSEEAKDLIKKCLNKDPSKRPTAEEILQHPWF 260

Length = 260

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  180 bits (459), Expect = 4e-54
 Identities = 100/353 (28%), Positives = 156/353 (44%), Gaps = 97/353 (27%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----------SIRKYRDAAMIEIDVL 116
           Y+ L K+GEGT+G V +  D++T E VA+K +R           ++R        EI +L
Sbjct: 1   YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALR--------EISLL 52

Query: 117 QHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           + L         H   V++ +       + +VFE     L  +L +    P   +L++  
Sbjct: 53  KEL--------KHPNIVKLLDVIHTERKLYLVFEYCDMDLKKYLDKRPG-PLSPNLIKSI 103

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             QLL  +AY H  R++H DLKP+NIL+             +  G            +KL
Sbjct: 104 MYQLLRGLAYCHSHRILHRDLKPQNILI-------------NRDGV-----------LKL 139

Query: 235 IDFG-STAF--DNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALF 290
            DFG + AF    + ++  V T  YRAPE++LG   +S   D+WSVGCI  E+ TG+ LF
Sbjct: 140 ADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLF 199

Query: 291 QTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
                ++ L  + + LG P  E                    +WP           V KL
Sbjct: 200 PGDSEIDQLFKIFQILGTPTEE--------------------SWPG----------VTKL 229

Query: 350 DRLKNM--------VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
              K          +   + R      DLL  +L+Y+P++R++A++AL HP+F
Sbjct: 230 PDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score =  176 bits (449), Expect = 1e-52
 Identities = 108/338 (31%), Positives = 161/338 (47%), Gaps = 61/338 (18%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK---VVRSIRKYRDAAMIEIDVLQHLAKND 123
           +Y++L  +GEG +G VL+C ++ T E VAIK           +  A+ E+ VL+ L    
Sbjct: 2   KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRH-- 59

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                + V ++  F  +  + +VFE +  +L + L+ +     P D VR +  QLL+++A
Sbjct: 60  ----ENIVNLKEAFRRKGRLYLVFEYVERTLLELLEASPG-GLPPDAVRSYIWQLLQAIA 114

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----S 239
           Y H   +IH D+KPENIL VS                       +S  +KL DFG     
Sbjct: 115 YCHSHNIIHRDIKPENIL-VS-----------------------ESGVLKLCDFGFARAL 150

Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSY--PCDMWSVGCILVELCTGEALFQTHENLE 297
            A      +  V+TR YRAPE+++G   +Y  P D+W++GCI+ EL  GE LF    +++
Sbjct: 151 RARPASPLTDYVATRWYRAPELLVG-DTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID 209

Query: 298 HLAMMERALGPL-PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
            L ++++ LGPL P H    +S      F  G     P      ES++      R    V
Sbjct: 210 QLYLIQKCLGPLPPSHQELFSS---NPRF-AGVAFPEPS---QPESLER-----RYPGKV 257

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           S       S   D L   LR DP ERLT  + L HP+F
Sbjct: 258 S-------SPALDFLKACLRMDPKERLTCDELLQHPYF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  170 bits (432), Expect = 4e-50
 Identities = 106/344 (30%), Positives = 156/344 (45%), Gaps = 75/344 (21%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR---DAAMIEIDVLQHLAKND 123
           RYKIL ++GEG  G V +  DR+T E VA+K V   R      + A+ EI  LQ      
Sbjct: 1   RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQAC---- 56

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                + V++ + F + +   +V E +   L + L R++  P P   V+ + R LL+ VA
Sbjct: 57  --QHPYVVKLLDVFPHGSGFVLVMEYMPSDLSEVL-RDEERPLPEAQVKSYMRMLLKGVA 113

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           YMH   ++H DLKP N+L+ +                           +K+ DFG +  F
Sbjct: 114 YMHANGIMHRDLKPANLLISADG------------------------VLKIADFGLARLF 149

Query: 243 DNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
             +    +S  V+TR YRAPE++ G   +    D+W+VGCI  EL  G  LF    ++E 
Sbjct: 150 SEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ 209

Query: 299 LAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPE-------GAVSRESIKAVKKLD 350
           LA++ R LG P  E                     WP          ++    K +    
Sbjct: 210 LAIVFRTLGTPNEE--------------------TWPGLTSLPDYNKITFPESKPI---- 245

Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L+ +       A     DLL GLL YDPS+RL+A +AL HP+F
Sbjct: 246 PLEEIFP----DASPEALDLLKGLLVYDPSKRLSAAEALRHPYF 285

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  168 bits (427), Expect = 2e-49
 Identities = 100/343 (29%), Positives = 155/343 (45%), Gaps = 76/343 (22%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA-----AMIEIDVLQHLAKN 122
           Y+ L K+GEGT+G V +  D+ T E VAIK ++   ++        A+ EI +L+ L   
Sbjct: 1   YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIK--LRFESEGIPKTALREIKLLKEL--- 55

Query: 123 DKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                +H   +++ + F ++  + +VFE +   L+  +K  +    P  L++ +  QLL+
Sbjct: 56  -----NHPNIIKLLDVFRHKGDLYLVFEFMDTDLYKLIKDRQR-GLPESLIKSYLYQLLQ 109

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
            +A+ H   ++H DLKPEN+L                        +     +KL DFG  
Sbjct: 110 GLAFCHSHGILHRDLKPENLL------------------------INTEGVLKLADFGLA 145

Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENL 296
            S     + ++  V TR YRAPE++LG  G+S P D+WSVGCI  EL +   LF     +
Sbjct: 146 RSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI 205

Query: 297 EHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGA----VSRESIKAVKKLDR 351
           + L  + R LG P PE                     WP+        + S      +  
Sbjct: 206 DQLFKIFRTLGTPDPEV--------------------WPKFTSLARNYKFSFPKKAGMP- 244

Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
               +      A     DLL  +L YDP +R+TA QAL HP+F
Sbjct: 245 ----LPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF 283

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score =  166 bits (424), Expect = 6e-49
 Identities = 97/340 (28%), Positives = 157/340 (46%), Gaps = 70/340 (20%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
           YK++ ++G+GTFG V    +++T E VAIK  +  +K+        + E+  L+ L ++ 
Sbjct: 1   YKVIKQLGDGTFGSVYLARNKETGELVAIK--KMKKKFYSWEECMNLREVKSLRKLNEHP 58

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                + V+++  F   + +  VFE +  +L+  +K  K  PF   ++R    Q+L+ +A
Sbjct: 59  -----NIVKLKEVFRENDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLA 113

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           ++H     H DLKPEN+L VS   +                       +K+ DFG +   
Sbjct: 114 HIHKHGFFHRDLKPENLL-VSGPEV-----------------------VKIADFGLAREI 149

Query: 243 DNQN-HSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
            ++  ++  VSTR YRAPE++L     S P D+W++GCI+ EL T   LF     ++ L 
Sbjct: 150 RSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLY 209

Query: 301 MMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD-RLKNMVSL 358
            +   LG P  +                    +WPEG       K   KL  R       
Sbjct: 210 KICSVLGTPTKQ--------------------DWPEG------YKLASKLGFRFPQFAPT 243

Query: 359 HVDR----ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            + +    A     DL+  +LR+DP +R TA QAL HP+F
Sbjct: 244 SLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF 283

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  159 bits (404), Expect = 7e-47
 Identities = 73/216 (33%), Positives = 104/216 (48%), Gaps = 37/216 (17%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           GEG FG V    D++T ++VAIK+++        +  + EI++L+ L         + V+
Sbjct: 2   GEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLN------HPNIVK 55

Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +   F+  NH+ +V E   G SL D LK N+      D +     Q+LE + Y+H   +I
Sbjct: 56  LYGVFEDENHLYLVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGII 114

Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHS 248
           H DLKPENILL S                           +KL DFG +     D     
Sbjct: 115 HRDLKPENILLDSDNGK-----------------------VKLADFGLSKLLTSDKSLLK 151

Query: 249 SIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVEL 283
           +IV T  Y APEV+LG G +S   D+WS+G IL EL
Sbjct: 152 TIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score =  157 bits (399), Expect = 3e-45
 Identities = 96/340 (28%), Positives = 156/340 (45%), Gaps = 71/340 (20%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
           YKIL K+GEGTF  VL+   R+T +  AIK     + ++    +    EI  L+ L+ + 
Sbjct: 1   YKILGKIGEGTFSEVLKAQSRKTGKYYAIK--CMKKHFKSLEQVNNLREIQALRRLSPH- 57

Query: 124 KGGSSHCVQIRN-WFDYR-NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                + +++    FD +   + +VFE +  +L++ +K  K  P P   V+ +  QLL+S
Sbjct: 58  ----PNILRLIEVLFDRKTGRLALVFELMDMNLYELIKGRKR-PLPEKRVKSYMYQLLKS 112

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS-- 239
           + +MH   + H D+KPENIL+                         K   +KL DFGS  
Sbjct: 113 LDHMHRNGIFHRDIKPENILI-------------------------KDDILKLADFGSCR 147

Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
             +    ++  +STR YRAPE +L  G +    D+W+VGC+  E+ +   LF     L+ 
Sbjct: 148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQ 207

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYF----RRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
           +A +   LG     ++++  +     +    ++G+ L                       
Sbjct: 208 IAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRK--------------------- 246

Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                +  A +   DLL  LL YDP ER+TA+QAL HP+F
Sbjct: 247 ----LLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF 282

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  148 bits (377), Expect = 4e-42
 Identities = 95/348 (27%), Positives = 159/348 (45%), Gaps = 82/348 (23%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
           Y+ ++++GEGT+G+V +  +++T E VA+K +R   + ++     A+ EI +LQ L    
Sbjct: 1   YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENE-KEGFPITAIREIKLLQKL---- 55

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLF--------DF--LKRNKYCPFPVDLV 171
                H   V++           IV  K   S++        D   L  +    F    +
Sbjct: 56  ----RHPNIVRL---------KEIVTSKGKGSIYMVFEYMDHDLTGLLDSPEVKFTESQI 102

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
           + + +QLLE + Y+H   ++H D+K  NIL+             ++ G            
Sbjct: 103 KCYMKQLLEGLQYLHSNGILHRDIKGSNILI-------------NNDGV----------- 138

Query: 232 IKLIDFG-STAFD---NQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTG 286
           +KL DFG +  +    + ++++ V T  YR PE++LG   +    DMWSVGCIL EL  G
Sbjct: 139 LKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLG 198

Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
           + +FQ    LE L  +    G             T++ +   S+L W E    ++  K  
Sbjct: 199 KPIFQGSTELEQLEKIFELCGSP-----------TDENWPGVSKLPWFENLKPKKPYKRR 247

Query: 347 KKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            + +  K+++        S L DLL  LL  DP +R++A QAL H +F
Sbjct: 248 LR-EFFKHLID------PSAL-DLLDKLLTLDPKKRISADQALQHEYF 287

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  146 bits (370), Expect = 8e-41
 Identities = 97/348 (27%), Positives = 148/348 (42%), Gaps = 77/348 (22%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA------AMIEIDVLQHLA 120
           RY+   K+GEGT+  V +  D++T   VAIK ++   +          A+ EI +LQ L 
Sbjct: 1   RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQEL- 59

Query: 121 KNDKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                   H   + + + F ++++I +VFE +   L + + ++K        ++ +    
Sbjct: 60  -------KHPNIIGLLDVFGHKSNINLVFEFMETDL-EKVIKDKSIVLTPADIKSYMLMT 111

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   ++H DLKP N+L+             +S G +           KL DFG
Sbjct: 112 LRGLEYLHSNWILHRDLKPNNLLI-------------ASDGVL-----------KLADFG 147

Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHE 294
              S    N+  +  V TR YRAPE++ G   +    DMWSVGCI  EL           
Sbjct: 148 LARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDS 207

Query: 295 NLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRE----SIKAVKKL 349
           +++ L  +  ALG P  E                    NWP   V+        K     
Sbjct: 208 DIDQLGKIFEALGTPTEE--------------------NWPG--VTSLPDYVEFKPFPPT 245

Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
             LK +       A     DLL  LL  +P++R+TARQAL HP+F N 
Sbjct: 246 P-LKQIFP----AASDDALDLLQRLLTLNPNKRITARQALEHPYFSND 288

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score =  144 bits (366), Expect = 2e-40
 Identities = 91/345 (26%), Positives = 151/345 (43%), Gaps = 76/345 (22%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD---AAMI-EIDVLQHLAKND 123
           Y+ L+++GEG +G V +  D  T   VA+K VR +    +    + + EI +L+ L   +
Sbjct: 1   YEELAEIGEGAYGTVYKARDLNTGRFVALKKVR-VPLSEEGIPLSTLREIALLKQL---E 56

Query: 124 KGGSSHCVQIR----NWFDYRN-HICIVFEKLGPSLFDFLKRNKYCP---FPVDLVREFG 175
                + V++          R   + +VFE +   L  +L +   CP    P + +++  
Sbjct: 57  SFEHPNIVRLLDVCHGPRTDRELKLTLVFEHVDQDLATYLSK---CPKPGLPPETIKDLM 113

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           RQLL  V ++H  R++H DLKP+NIL+             +S G+           +K+ 
Sbjct: 114 RQLLRGVDFLHSHRIVHRDLKPQNILV-------------TSDGQ-----------VKIA 149

Query: 236 DFG-STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
           DFG +  +  +   +S+V T  YRAPEV+L   ++ P DMWSVGCI  EL     LF+  
Sbjct: 150 DFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGT 209

Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWP-EGAVSRESIK---AVKKL 349
              + L  +   +G   E                     WP   ++ R S          
Sbjct: 210 SEADQLDKIFDVIGLPSEE-------------------EWPRNVSLPRSSFPSYTPRSFK 250

Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
             +  +             DLL  +L ++P +R++A +AL HP+F
Sbjct: 251 SFVPEICEEG--------LDLLKKMLTFNPHKRISAFEALQHPYF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  141 bits (358), Expect = 3e-39
 Identities = 98/345 (28%), Positives = 156/345 (45%), Gaps = 76/345 (22%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA----AMIEIDVL---QHLA 120
           Y+ L+++ EGT+G V    D++T E VA+K ++ + K ++     ++ EI++L   QH  
Sbjct: 7   YEKLNRIEEGTYGVVYRARDKKTGEIVALKKLK-MEKEKEGFPITSLREINILLKLQH-- 63

Query: 121 KNDKGGSSHCVQIRNWF--DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                   + V ++        + I +V E +   L   ++  K  PF    V+    QL
Sbjct: 64  -------PNIVTVKEVVVGSNLDKIYMVMEYVEHDLKSLMETMKQ-PFLQSEVKCLMLQL 115

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  VA++HD  ++H DLK  N+LL             ++ G            +K+ DFG
Sbjct: 116 LSGVAHLHDNWILHRDLKTSNLLL-------------NNRGI-----------LKICDFG 151

Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHE 294
                    + ++ +V T  YRAPE++LG   +S   DMWSVGCI  EL T + LF    
Sbjct: 152 LAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKS 211

Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
            ++ L  + + LG  P          TEK         WP        +   KK    K 
Sbjct: 212 EIDQLNKIFKLLG-TP----------TEK--------IWPG----FSELPGAKKKTFTKY 248

Query: 355 MVSLHVDRARST-LT----DLLHGLLRYDPSERLTARQALNHPFF 394
             +    +  +  L+    DLL+ LL YDP++R++A  AL HP+F
Sbjct: 249 PYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF 293

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  140 bits (355), Expect = 3e-39
 Identities = 85/331 (25%), Positives = 135/331 (40%), Gaps = 84/331 (25%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKG 125
           ++IL K+G+G FG V +   ++T + VAIKV++ +        I  EI +L+        
Sbjct: 2   FEILEKIGKGGFGEVYKARHKRTGKEVAIKVIK-LESKEKKEKIINEIQILKKCK----- 55

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
              + V+    +  ++ + IV E   G SL D LK +         +    ++LL+ + Y
Sbjct: 56  -HPNIVKYYGSYLKKDELWIVMEFCSGGSLKDLLK-STNQTLTESQIAYVCKELLKGLEY 113

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-- 242
           +H   +IH D+K  NILL             +S GE           +KLIDFG +A   
Sbjct: 114 LHSNGIIHRDIKAANILL-------------TSDGE-----------VKLIDFGLSAQLS 149

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
           D +  +++V T ++ APEVI G  + Y  D+WS+G   +EL  G+  +   E     A+ 
Sbjct: 150 DTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPY--SELPPMKALF 207

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
           + A    P               R      W                D  K+ +      
Sbjct: 208 KIATNGPPG-------------LRNPE--KWS---------------DEFKDFLKK---- 233

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                       L+ +P +R TA Q L HPF
Sbjct: 234 -----------CLQKNPEKRPTAEQLLKHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score =  139 bits (351), Expect = 2e-38
 Identities = 93/333 (27%), Positives = 167/333 (50%), Gaps = 52/333 (15%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKND 123
           ++++L  +GEG +G VL+C  ++T+E VAIK  +      + ++  + E+ +L+ L + +
Sbjct: 2   KFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQEN 61

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                  V+++  F  R  + +VFE +  ++ + L+       P + VR +  QL++++ 
Sbjct: 62  ------IVELKEAFRRRGKLYLVFEYVEKNMLELLEEMPNGVPP-EKVRSYIYQLIKAIH 114

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + H   ++H D+KPEN+L+  ++ +KL   G+ R+ S                   GS A
Sbjct: 115 WCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE------------------GSNA 156

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
               N++  V+TR YR+PE++LG  +    DMWSVGCIL EL  G+ LF     ++ L  
Sbjct: 157 ----NYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFT 212

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           +++ LGPLP   +        K F    R +     +   ++   + L+R       ++ 
Sbjct: 213 IQKVLGPLPAEQM--------KLFYSNPRFH----GLRFPAVNHPQSLER------RYLG 254

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                L DL+  LL+ +P++R    Q LNHP F
Sbjct: 255 ILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score =  136 bits (345), Expect = 2e-37
 Identities = 100/339 (29%), Positives = 167/339 (49%), Gaps = 65/339 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRS-----IRKYRDAAMIEIDVLQHLA 120
           +Y+ LSK+GEG++G V +C +R+T + VAIK  V S     I+K    A+ EI +L+ L 
Sbjct: 2   KYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKK---IALREIRMLKQLK 58

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
             +       V +   F  +  + +VFE    ++ + L++N     P  L+++   Q L+
Sbjct: 59  HPN------LVNLIEVFRRKRKLHLVFEYCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQ 111

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           +V + H    IH D+KPENIL+                         K   IKL DFG  
Sbjct: 112 AVNFCHKHNCIHRDVKPENILIT------------------------KQGQIKLCDFGFA 147

Query: 241 AFDN---QNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                   +++  V+TR YRAPE+++G   +  P D+W++GC+  EL TG+ L+    ++
Sbjct: 148 RILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDV 207

Query: 297 EHLAMMERALGPL-PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           + L ++ + LG L P H   +    T ++F +G  +  PE   +RE ++      +  N+
Sbjct: 208 DQLYLIRKTLGDLIPRH---QQIFSTNQFF-KGLSIPEPE---TREPLE-----SKFPNI 255

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            S  +          L G L+ DP+ERL+  + L HP+F
Sbjct: 256 SSPAL--------SFLKGCLQMDPTERLSCEELLEHPYF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score =  137 bits (347), Expect = 3e-37
 Identities = 92/348 (26%), Positives = 155/348 (44%), Gaps = 76/348 (21%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--------RKYRDAAMIEIDVLQH 118
           RY++L  +G G +G V    D++T  +VAIK + ++        R  R     EI +L+H
Sbjct: 1   RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILR-----EIKLLRH 55

Query: 119 LAKNDKGGSSHCVQIRNWF-----DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
           L +++     + + + +       +  N + IV E +   L   +K  +  P   D ++ 
Sbjct: 56  L-RHE-----NIIGLLDILRPPSPEDFNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQY 107

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F  Q+L  + Y+H   +IH DLKP NIL+ S+                   C      +K
Sbjct: 108 FLYQILRGLKYLHSANVIHRDLKPSNILVNSN-------------------CD-----LK 143

Query: 234 LIDFG--STAFDNQNHSSI----VSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTG 286
           + DFG       +++        V TR YRAPE++L    ++   D+WSVGCI  EL T 
Sbjct: 144 ICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTR 203

Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
           + LF   + ++ L ++   LG   E                   L +     +R  +K++
Sbjct: 204 KPLFPGRDYIDQLNLIVEVLGTPSEED-----------------LKFITSEKARNYLKSL 246

Query: 347 KKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K  + K +  L    +   + DLL  +L +DP +R+TA +AL HP+ 
Sbjct: 247 PKKPK-KPLSKLFPGASPEAI-DLLEKMLVFDPKKRITADEALAHPYL 292

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score =  132 bits (334), Expect = 6e-36
 Identities = 95/334 (28%), Positives = 148/334 (44%), Gaps = 58/334 (17%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDKG 125
           +K L K+GEGT+  V +  +R T E VA+K +   +       A+ EI +++ L   +  
Sbjct: 2   FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHEN-- 59

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLK-RNKYCPFPVDLVREFGRQLLESVAY 184
                V++ +     N + +VFE +   L  ++           + V+ F  QLL+ +A+
Sbjct: 60  ----IVRLHDVIHTENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAF 115

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H+ R++H DLKP+N+L+             +  GE+           KL DFG + AF 
Sbjct: 116 CHENRVLHRDLKPQNLLI-------------NKRGEL-----------KLADFGLARAFG 151

Query: 244 --NQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                 S+ V T  YRAP+V+LG   +S   D+WSVGCI+ E+ TG  LF    N + L 
Sbjct: 152 IPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLL 211

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R +G   E      S               PE   +            L+ +     
Sbjct: 212 KIFRIMGTPTESTWPGIS-------------QLPEYKPTFPRYPPQD----LQQLFP--- 251

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
             A     DLLH LL+ +P  R++A  AL HP+F
Sbjct: 252 -HADPLGIDLLHRLLQLNPELRISAHDALQHPWF 284

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  135 bits (339), Expect = 7e-36
 Identities = 90/346 (26%), Positives = 133/346 (38%), Gaps = 86/346 (24%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKND 123
           Y+IL K+GEG+FG V    DR+    VA+KV+     S  K  +  + EI +L  L    
Sbjct: 2   YRILRKLGEGSFGEVYLARDRKL---VALKVLAKKLESKSKEVERFLREIQILASL---- 54

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYC-PFPVDLVREFGRQLLES 181
                + V++ ++F     + +V E + G SL D LK+     P           Q+L +
Sbjct: 55  -NHPPNIVKLYDFFQDEGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSA 113

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--- 238
           + Y+H   +IH D+KPENILL                             +KLIDFG   
Sbjct: 114 LEYLHSKGIIHRDIKPENILLD-----------------------RDGRVVKLIDFGLAK 150

Query: 239 ------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPC---DMWSVGCILVELCTGEAL 289
                 ST+      S+ V T  Y APEV+LGL  +Y     D+WS+G  L EL TG   
Sbjct: 151 LLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPP 210

Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
           F+                                        N    + + + I  +   
Sbjct: 211 FE-------------------------------------GEKNSSATSQTLKIILELPTP 233

Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                +   + +      +DLL  LL  DP  RL++   L+H    
Sbjct: 234 SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLA 279

Length = 384

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score =  131 bits (331), Expect = 2e-35
 Identities = 99/347 (28%), Positives = 153/347 (44%), Gaps = 84/347 (24%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----------SIRKYRDAAMIEIDVL 116
           Y+ + K+GEGT+G V +  D+ T E VA+K +R           +IR        EI +L
Sbjct: 1   YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIR--------EISLL 52

Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGR 176
           + L  N      + V++ +     N + +VFE L   L  ++  +        L++ +  
Sbjct: 53  KEL--NH----PNIVRLLDVVHSENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLY 106

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           QLL+ +AY H  R++H DLKP+N+L+                         +  A+KL D
Sbjct: 107 QLLQGIAYCHSHRVLHRDLKPQNLLI------------------------DREGALKLAD 142

Query: 237 FG-STAFD----NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALF 290
           FG + AF        H   V T  YRAPE++LG   +S P D+WS+GCI  E+     LF
Sbjct: 143 FGLARAFGVPVRTYTHE--VVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLF 200

Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKY---FRRGSRLNWPEGAVSRESIKAVK 347
                ++ L  + R LG  P+  +         Y   F + +R +           K V 
Sbjct: 201 PGDSEIDQLFRIFRTLGT-PDEDVWPGVTSLPDYKPTFPKWARQDLS---------KVVP 250

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            LD                  DLL  +L YDP++R++A+ AL HP+F
Sbjct: 251 NLDEDG--------------LDLLSKMLVYDPAKRISAKAALQHPYF 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  130 bits (330), Expect = 2e-35
 Identities = 68/256 (26%), Positives = 110/256 (42%), Gaps = 52/256 (20%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           G G+FG V    D+ T E +A+K V       +  +A   EI +L  L         + V
Sbjct: 9   GRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ------HPNIV 62

Query: 132 QIR--NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
           +       + +N + I  E + G SL   LK+      P  ++R++ RQ+LE +AY+H  
Sbjct: 63  RYYGSERDEEKNTLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSN 120

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG------STAF 242
            ++H D+K  NIL+              S G            +KL DFG          
Sbjct: 121 GIVHRDIKGANILV-------------DSDGV-----------VKLADFGCAKRLGDIET 156

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
                 S+  T ++ APEVI G  +    D+WS+GC ++E+ TG+  +   E    +A +
Sbjct: 157 GEGTG-SVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPW--SELGNPMAAL 213

Query: 303 ERALG-----PLPEHM 313
            +         +PEH+
Sbjct: 214 YKIGSSGEPPEIPEHL 229

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score =  131 bits (330), Expect = 2e-35
 Identities = 99/331 (29%), Positives = 153/331 (46%), Gaps = 58/331 (17%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L        
Sbjct: 5   VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL------NH 58

Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
            + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+ H 
Sbjct: 59  PNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHS 118

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD--N 244
            R++H DLKP+N+L                        +    AIKL DFG + AF    
Sbjct: 119 HRVLHRDLKPQNLL------------------------INTEGAIKLADFGLARAFGVPV 154

Query: 245 QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
           + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L  + 
Sbjct: 155 RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIF 214

Query: 304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA 363
           R LG  P+ ++         Y  + S   W     S    K V  LD             
Sbjct: 215 RTLGT-PDEVVWPGVTSLPDY--KPSFPKWARQDFS----KVVPPLDE------------ 255

Query: 364 RSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                DLL  +L YDP++R++A+ AL HPFF
Sbjct: 256 --DGRDLLSQMLHYDPNKRISAKAALAHPFF 284

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score =  130 bits (328), Expect = 2e-34
 Identities = 102/352 (28%), Positives = 159/352 (45%), Gaps = 85/352 (24%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--------RSIRKYRDAAMIEIDVLQH 118
           +Y+IL K+G+G +G V +  DR+T+E VA+K +         + R +R     EI  LQ 
Sbjct: 8   KYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFR-----EIMFLQE 62

Query: 119 LAKNDKGGSSHCVQIRNWFDYRNH--ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGR 176
           L  +      + V++ N     N   I +VFE +   L   ++ N        ++ +  +
Sbjct: 63  LGDHP-----NIVKLLNVIKAENDKDIYLVFEYMETDLHAVIRAN--------ILEDVHK 109

Query: 177 -----QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
                QLL+++ Y+H   +IH DLKP NILL +S+                  C      
Sbjct: 110 RYIMYQLLKALKYIHSGNVIHRDLKPSNILL-NSD------------------CR----- 145

Query: 232 IKLIDFG---STAFDNQNHSSI-----VSTRHYRAPEVILGLGW-SYPCDMWSVGCILVE 282
           +KL DFG   S +   +N  +      V+TR YRAPE++LG    +   DMWSVGCIL E
Sbjct: 146 VKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGE 205

Query: 283 LCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES 342
           +  G+ LF     L  L  +   +GP     I                +  P  A   +S
Sbjct: 206 MLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIE--------------SIKSPFAATMLDS 251

Query: 343 IKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  +   L  ++     +A     DLL  LL ++P++RLTA +AL HP+ 
Sbjct: 252 LPSRPR-KPLDELLP----KASDDALDLLKKLLVFNPNKRLTAEEALEHPYV 298

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score =  126 bits (319), Expect = 1e-33
 Identities = 98/349 (28%), Positives = 152/349 (43%), Gaps = 79/349 (22%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR---DAAMIEIDVLQHLAKNDK 124
           Y+ L K+GEGT+G+V +  D+ T + VA+K  R           A+ EI +LQ L     
Sbjct: 3   YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQML----- 57

Query: 125 GGSSHCVQIRNWFDYRN--------HICIVFEKLGPSLFDFLKRNK---YCPFPVDLVRE 173
              S  + I    D  +         + +VFE L   L  F+  N      P P   ++ 
Sbjct: 58  ---SESIYIVRLLDVEHVEEKNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKS 114

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F  QLL+ VA+ H   ++H DLKP+N+L+   + +                       +K
Sbjct: 115 FMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGL-----------------------LK 151

Query: 234 LIDFG-STAFDN--QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEAL 289
           + D G   AF    ++++  + T  YRAPEV+LG   +S P D+WSVGCI  E+   + L
Sbjct: 152 IADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPL 211

Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
           F     L+ L  + + LG   E +                   WP        +  ++  
Sbjct: 212 FPGDSELQQLLHIFKLLGTPTEQV-------------------WPG-------VSKLRDW 245

Query: 350 DRLKNMVSLHVDRARSTLT----DLLHGLLRYDPSERLTARQALNHPFF 394
                     + RA   L+    DLL  +LRYDP++R++A+ AL HP+F
Sbjct: 246 HEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYF 294

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  124 bits (313), Expect = 6e-33
 Identities = 92/344 (26%), Positives = 134/344 (38%), Gaps = 105/344 (30%)

Query: 77  GTFGRVLECWDRQTQERVAIKVVRS---IRKYR-DAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           G +GRV     + T +  AIKV++    IRK + D  + E D+L          S + V+
Sbjct: 4   GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ------SPYVVK 57

Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +   F  + ++ +V E L G  L   L+         D+ R +  +++ ++ Y+H   +I
Sbjct: 58  LYYSFQGKKNLYLVMEYLPGGDLASLLE--NVGSLDEDVARIYIAEIVLALEYLHSNGII 115

Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSS-- 249
           H DLKP+NIL+              S+G            +KL DFG +           
Sbjct: 116 HRDLKPDNILI-------------DSNGH-----------LKLTDFGLSKVGLVRRQINL 151

Query: 250 ---------IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                    IV T  Y APEVILG G S   D WS+GCIL E   G   F  H       
Sbjct: 152 NDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPF--HGETP--- 206

Query: 301 MMERALGPLPEHMIRRASRGTEKYFR--RGSRLNWPEG-AVSRESIKAVKKLDRLKNMVS 357
                                E+ F+     ++ WPE   VS E+I              
Sbjct: 207 ---------------------EEIFQNILNGKIEWPEDVEVSDEAI-------------- 231

Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQA---LNHPFFRNLN 398
                      DL+  LL  DP +RL A+      NHPFF+ ++
Sbjct: 232 -----------DLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID 264

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  123 bits (310), Expect = 1e-32
 Identities = 86/331 (25%), Positives = 136/331 (41%), Gaps = 93/331 (28%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMI--EIDVLQHLAKNDKGGSSHC 130
           G+G+FG+VL    + T +  A+KV++   I K ++      E ++L  +           
Sbjct: 2   GKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN------HPFI 55

Query: 131 VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR 189
           V++   F     + +V E   G  LF  L +     F  +  R +  +++ ++ Y+H L 
Sbjct: 56  VKLHYAFQTEEKLYLVLEYAPGGELFSHLSKEGR--FSEERARFYAAEIVLALEYLHSLG 113

Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA---FDNQN 246
           +I+ DLKPENILL +       G+                  IKL DFG       +   
Sbjct: 114 IIYRDLKPENILLDAD------GH------------------IKLTDFGLAKELSSEGSR 149

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL 306
            ++   T  Y APEV+LG G+    D WS+G +L E+ TG+  F   +  E   + E+  
Sbjct: 150 TNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKE---IYEK-- 204

Query: 307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST 366
                  I +              L +PE  +S E                     AR  
Sbjct: 205 -------ILK------------DPLRFPEF-LSPE---------------------AR-- 221

Query: 367 LTDLLHGLLRYDPSERLTARQA---LNHPFF 394
             DL+ GLL+ DP++RL +  A     HPFF
Sbjct: 222 --DLISGLLQKDPTKRLGSGGAEEIKAHPFF 250

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score =  123 bits (310), Expect = 2e-32
 Identities = 93/334 (27%), Positives = 158/334 (47%), Gaps = 57/334 (17%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           Y  + K+GEGT+G V +  +++T + VA+K +R           A+ EI +L+ L     
Sbjct: 2   YTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQH--- 58

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLES 181
               + V +++     + + ++FE L   L    D L + +Y     +LV+ +  Q+L+ 
Sbjct: 59  ---PNIVCLQDVLMQESRLYLIFEFLSMDLKKYLDSLPKGQY--MDAELVKSYLYQILQG 113

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + + H  R++H DLKP+N+L+ +   IKL  +  + +  +P R                 
Sbjct: 114 ILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRV---------------- 157

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                ++  V T  YRAPEV+LG   +S P D+WS+G I  E+ T + LF     ++ L 
Sbjct: 158 -----YTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLF 212

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P   +         Y  + +   W +G++      AVK LD          
Sbjct: 213 RIFRILGT-PTEDVWPGVTSLPDY--KNTFPKWKKGSLR----SAVKNLD---------- 255

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                   DLL  +L YDP++R++A++ALNHP+F
Sbjct: 256 ----EDGLDLLEKMLIYDPAKRISAKKALNHPYF 285

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score =  122 bits (309), Expect = 3e-32
 Identities = 94/343 (27%), Positives = 163/343 (47%), Gaps = 73/343 (21%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK---------VVRSIRKYRDAAMIEIDVLQ 117
           +Y+ L  +GEG++G V++C  ++T + VAIK         +V+ I      AM EI +L+
Sbjct: 2   KYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKI------AMREIRMLK 55

Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFG 175
            L   +       V +   F  +  + +VFE +  ++ D L++    P  +D   VR++ 
Sbjct: 56  QLRHEN------LVNLIEVFRRKKRLYLVFEFVDHTVLDDLEKY---PNGLDESRVRKYL 106

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            Q+L  + + H   +IH D+KPENI LVS                       +S  +KL 
Sbjct: 107 FQILRGIEFCHSHNIIHRDIKPENI-LVS-----------------------QSGVVKLC 142

Query: 236 DFG---STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQ 291
           DFG   + A   + ++  V+TR YRAPE+++G   +    D+W+VGC++ E+ TGE LF 
Sbjct: 143 DFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFP 202

Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
              +++ L  + + LG L            ++ F++    N     +    +K ++ L++
Sbjct: 203 GDSDIDQLYHIIKCLGNLIPRH--------QEIFQK----NPLFAGMRLPEVKEIEPLEK 250

Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
               +S         + DL    LR DP +R ++ Q L+H FF
Sbjct: 251 RFPKLS-------GLVLDLAKQCLRIDPDDRPSSSQLLHHEFF 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score =  122 bits (307), Expect = 7e-32
 Identities = 100/341 (29%), Positives = 159/341 (46%), Gaps = 63/341 (18%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR---DAAMIEIDVLQHLAKND 123
           +Y+ + K+GEGT+G V +  DR T E +A+K +R  ++       A+ EI +L+ +    
Sbjct: 3   QYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH-- 60

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP-FPVD--LVREFGRQLLE 180
                + V++++       + +VFE L     D  K     P F  +  L++ +  Q+L 
Sbjct: 61  ----GNIVRLQDVVHSEKRLYLVFEYLD---LDLKKHMDSSPDFAKNPRLIKTYLYQILR 113

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
            +AY H  R++H DLKP+N+L+                          ++A+KL DFG +
Sbjct: 114 GIAYCHSHRVLHRDLKPQNLLIDRR-----------------------TNALKLADFGLA 150

Query: 240 TAFD--NQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
            AF    +  +  V T  YRAPE++LG   +S P D+WSVGCI  E+   + LF     +
Sbjct: 151 RAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI 210

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           + L  + R LG   E                     WP G  S    K+       K++ 
Sbjct: 211 DELFKIFRILGTPNEET-------------------WP-GVTSLPDYKSAFPKWPPKDLA 250

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           ++ V        DLL  +LR DPS+R+TAR AL H +F++L
Sbjct: 251 TV-VPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDL 290

Length = 294

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  121 bits (305), Expect = 7e-32
 Identities = 83/339 (24%), Positives = 144/339 (42%), Gaps = 92/339 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
           +Y+I+ ++G+G+FG+V     +   +   +K +       K R+ A+ E+ +L+ L  + 
Sbjct: 1   KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKL-NHP 59

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYC--PFPVDLVREFGRQLLE 180
                + ++    F+ +  +CIV E   G  L   +K+ K    PFP + + ++  QL  
Sbjct: 60  -----NIIKYYESFEEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCL 114

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
           ++ Y+H  +++H D+KP+NI L S+  +KL        G                DFG S
Sbjct: 115 ALKYLHSRKILHRDIKPQNIFLTSNGLVKL--------G----------------DFGIS 150

Query: 240 TAFDN--QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
               +      ++V T +Y +PE+     ++Y  D+WS+GC+L ELCT +  F+  ENL 
Sbjct: 151 KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFE-GENLL 209

Query: 298 HLAM--MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
            LA+  ++    P+P                            S E              
Sbjct: 210 ELALKILKGQYPPIPSQ-------------------------YSSE-------------- 230

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                      L +L+  LL+ DP ER +  Q L  PF 
Sbjct: 231 -----------LRNLVSSLLQKDPEERPSIAQILQSPFI 258

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score =  122 bits (308), Expect = 1e-31
 Identities = 95/354 (26%), Positives = 155/354 (43%), Gaps = 82/354 (23%)

Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--------RKYRDAAMIEIDV 115
           +  RYK +  +G G +G V    D ++ ++VAIK +           R  R     E+ +
Sbjct: 3   VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLR-----ELKI 57

Query: 116 LQHLAKNDKGGSSHCVQIRNWF-----DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL 170
           L+H  K+D     + + IR+       D++  + +V + +   L   +  ++  P   + 
Sbjct: 58  LRHF-KHD-----NIIAIRDILRPPGADFK-DVYVVMDLMESDLHHIIHSDQ--PLTEEH 108

Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R F  QLL  + Y+H   +IH DLKP N LLV+ +                  C     
Sbjct: 109 IRYFLYQLLRGLKYIHSANVIHRDLKPSN-LLVNED------------------CE---- 145

Query: 231 AIKLIDFG------STAFDNQNH-SSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVE 282
            +++ DFG      S+  +++   +  V+TR YRAPE++L L  ++   DMWSVGCI  E
Sbjct: 146 -LRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAE 204

Query: 283 LCTGEALFQTHENLEHLAMMERALGPLPEHMIRR--ASRGTEKYFRRGSRLNWPEGAVSR 340
           +     LF     +  L ++   LG   E ++ R  + R   KY +     N P      
Sbjct: 205 MLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDR-VRKYIQ-----NLPR----- 253

Query: 341 ESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
              K      ++         +A     DLL  +L++DP ER+T  QAL HPF 
Sbjct: 254 ---KQPVPWSKI-------FPKASPEALDLLSQMLQFDPEERITVEQALQHPFL 297

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score =  120 bits (302), Expect = 5e-31
 Identities = 88/359 (24%), Positives = 140/359 (38%), Gaps = 87/359 (24%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKN 122
            Y+IL K+GEGTFG V +    +T   VA+K +  +   +D     A+ EI +L+ L   
Sbjct: 9   DYEILGKLGEGTFGEVYKARQIKTGRVVALKKI-LMHNEKDGFPITALREIKILKKL--- 64

Query: 123 DKGGSSHCVQIRNWFDYRNHICIV------FEKLGPSLFDFLKRNKYCPFPV---DL--- 170
                              H  +V       E+  P      + + Y   P    DL   
Sbjct: 65  ------------------KHPNVVPLIDMAVER--PDKSKRKRGSVYMVTPYMDHDLSGL 104

Query: 171 ------------VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRS 216
                       ++ +  QLLE + Y+H+  ++H D+K  NIL+ +   +K+   G  R 
Sbjct: 105 LENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARP 164

Query: 217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWS 275
             G  P               G T      ++++V TR YR PE++LG   ++   D+W 
Sbjct: 165 YDGPPP--NPKGGGG------GGTR----KYTNLVVTRWYRPPELLLGERRYTTAVDIWG 212

Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
           +GC+  E+ T   + Q   +++ L ++ +  G   E                     WP 
Sbjct: 213 IGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEE-------------------TWP- 252

Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           G  S    + V         +     +      DLL  LL  DP +RLTA  AL HP+F
Sbjct: 253 GWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF 311

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score =  119 bits (300), Expect = 1e-30
 Identities = 100/342 (29%), Positives = 152/342 (44%), Gaps = 57/342 (16%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY-RDAAMI--EIDVLQHLAKND 123
           RYKI   +G+G++G V    D  T E+VAIK +  + ++  DA  I  EI +L+ L   D
Sbjct: 1   RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPD 60

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE----FGRQLL 179
                H +   +  ++++ I +VFE +   L   +K N       DL  E    F  QLL
Sbjct: 61  IVEIKHIMLPPSRREFKD-IYVVFELMESDLHQVIKAND------DLTPEHHQFFLYQLL 113

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDF 237
            ++ Y+H   + H DLKP+NIL  +   +K+   G  R +  + P       +AI   D+
Sbjct: 114 RALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTP-------TAIFWTDY 166

Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILGLGWSY--PCDMWSVGCILVELCTGEALFQTHEN 295
                        V+TR YRAPE+       Y    D+WS+GCI  E+ TG+ LF     
Sbjct: 167 -------------VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV 213

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           +  L ++   LG      I R     EK               +R  + +++K  +    
Sbjct: 214 VHQLDLITDLLGTPSPETISRV--RNEK---------------ARRYLSSMRK--KQPVP 254

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
            S     A      LL  LL +DP +R TA +AL  P+F+ L
Sbjct: 255 FSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGL 296

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  117 bits (295), Expect = 2e-30
 Identities = 80/336 (23%), Positives = 128/336 (38%), Gaps = 86/336 (25%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKV--VRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           + +  +G+G+ G V +   + T +  A+K   V    ++R   + E+  L+         
Sbjct: 4   ERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRS------CE 57

Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
           S + V+    F     I IV E + G SL D LK+      P  ++    RQ+L+ + Y+
Sbjct: 58  SPYVVKCYGAFYKEGEISIVLEYMDGGSLADLLKKVG--KIPEPVLAYIARQILKGLDYL 115

Query: 186 H-DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
           H    +IH D+KP N+L+             +S GE           +K+ DFG S   +
Sbjct: 116 HTKRHIIHRDIKPSNLLI-------------NSKGE-----------VKIADFGISKVLE 151

Query: 244 N--QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
           N     ++ V T  Y +PE I G  +SY  D+WS+G  L+E   G+  F          +
Sbjct: 152 NTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFEL 211

Query: 302 MER-ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
           M+    GP P                       P    S E                   
Sbjct: 212 MQAICDGPPPS---------------------LPAEEFSPE------------------- 231

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                   D +   L+ DP +R +A + L HPF + 
Sbjct: 232 ------FRDFISACLQKDPKKRPSAAELLQHPFIKK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score =  116 bits (293), Expect = 9e-30
 Identities = 95/345 (27%), Positives = 143/345 (41%), Gaps = 76/345 (22%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
           ++ L+++GEGT+G V    D  + E VA+K VR +   RD   I    EI +L +L   +
Sbjct: 9   FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVR-MDNERDGIPISSLREITLLLNLRHPN 67

Query: 124 KGGSSHCVQIRNWF--DYRNHICIVFE----KLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
                  V+++      + + I +V E     L  SL D    N   PF    V+    Q
Sbjct: 68  ------IVELKEVVVGKHLDSIFLVMEYCEQDLA-SLLD----NMPTPFSESQVKCLMLQ 116

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           LL  + Y+H+  +IH DLK  N+LL             +  G            +K+ DF
Sbjct: 117 LLRGLQYLHENFIIHRDLKVSNLLL-------------TDKGC-----------LKIADF 152

Query: 238 G-STAFDNQNH--SSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
           G +  +       +  V T  YRAPE++LG   ++   DMW+VGCIL EL   + L    
Sbjct: 153 GLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGK 212

Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
             +E L ++ + LG   E +                   WP        +  V K    K
Sbjct: 213 SEIEQLDLIIQLLGTPNESI-------------------WP----GFSDLPLVGKFTLPK 249

Query: 354 ---NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
              N +             LL+ LL YDP +R TA +AL   +F+
Sbjct: 250 QPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFK 294

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score =  115 bits (291), Expect = 1e-29
 Identities = 95/335 (28%), Positives = 152/335 (45%), Gaps = 58/335 (17%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
           +Y+ L K+GEGT+G V +  +R+T E VA+K VR          +A+ EI +L+ L   +
Sbjct: 1   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 60

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD--LVREFGRQLLES 181
                  V++ +       + +VFE     L  +      C   +D  +V+ F  QLL+ 
Sbjct: 61  ------IVRLYDVLHSDKKLTLVFEYCDQDLKKYFDS---CNGDIDPEIVKSFMFQLLKG 111

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           +A+ H   ++H DLKP+N+L+  +  +KL  +  + +  +P RC                
Sbjct: 112 LAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRC---------------- 155

Query: 242 FDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL 299
                +S+ V T  YR P+V+ G   +S   DMWS GCI  EL   G  LF  ++  + L
Sbjct: 156 -----YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 210

Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
             + R LG   E                    +WP G       K         ++V++ 
Sbjct: 211 KRIFRLLGTPTEE-------------------SWP-GVSKLPDYKPYPMYPATTSLVNV- 249

Query: 360 VDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           V +  ST  DLL  LL  +P +R++A +AL HP+F
Sbjct: 250 VPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score =  115 bits (290), Expect = 4e-29
 Identities = 87/360 (24%), Positives = 145/360 (40%), Gaps = 64/360 (17%)

Query: 59  NLGENLTPRYKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSI---------RKYRDA 108
           N+  +++ RY      +GEGT+G+V + +D  T + VAIK V+ I         R+    
Sbjct: 1   NMSFSISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGM 60

Query: 109 AMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPV 168
             I    L+ L   ++    + + + + +   + I +V + +   L   + R        
Sbjct: 61  CGIHFTTLRELKIMNEIKHENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKIR--LTE 118

Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCL 226
             V+    Q+L  +  +H    +H DL P NI + S    K+   G  R          L
Sbjct: 119 SQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTL 178

Query: 227 PKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT 285
            K   ++           +  +S V T  YRAPE+++G   + +  DMWSVGCI  EL T
Sbjct: 179 SKDETMQR---------REEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLT 229

Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRG--SRLNWPEGAVSRESI 343
           G+ LF     ++ L  +                     +   G  +  NWP+        
Sbjct: 230 GKPLFPGENEIDQLGRI---------------------FELLGTPNEDNWPQ-------- 260

Query: 344 KAVKKLD-------RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
              KKL        R    +      A     DLL  LL+ +P ER++A++AL H +F++
Sbjct: 261 --AKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKS 318

Length = 335

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score =  113 bits (284), Expect = 2e-28
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 18  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 72

Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 73  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 129

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 130 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 165

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 166 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 225

Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 226 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 267

Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 268 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 303

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score =  113 bits (284), Expect = 2e-28
 Identities = 93/344 (27%), Positives = 153/344 (44%), Gaps = 64/344 (18%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--------SIRKYRDAAMIEIDVLQH 118
           RY+ L ++G G +G V    DR+T  +VAIK +         + R YR     E+ +L+H
Sbjct: 16  RYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYR-----ELRLLKH 70

Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           D  +   +V   +G  L   +K  K      D ++    Q+
Sbjct: 71  MKHENVIGLLDVFTPDLSLDRFHDFYLVMPFMGTDLGKLMKHEK---LSEDRIQFLVYQM 127

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L+ + Y+H   +IH DLKP N L V+ +                         +K++DFG
Sbjct: 128 LKGLKYIHAAGIIHRDLKPGN-LAVNED-----------------------CELKILDFG 163

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V TR YRAPEVIL  + ++   D+WSVGCI+ E+ TG+ LF+ H++L+
Sbjct: 164 LARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD 223

Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL--KNM 355
            L  + +  G   +  +++                      S ++   VKKL R   K+ 
Sbjct: 224 QLMEIMKVTGTPSKEFVQKLQ--------------------SEDAKNYVKKLPRFRKKDF 263

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
            SL +  A     ++L  +L  D   R+TA +AL HP+F   ++
Sbjct: 264 RSL-LPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD 306

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score =  112 bits (282), Expect = 4e-28
 Identities = 95/347 (27%), Positives = 153/347 (44%), Gaps = 71/347 (20%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--------SIRKYRDAAMIEIDVLQH 118
           RY  L ++G G +G V    D++T E+VAIK +         + R YR     E+ +L+H
Sbjct: 16  RYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYR-----ELTLLKH 70

Query: 119 LAKNDKGG----SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +   +  G     +  V    + D        F  + P +   L++    P   D V+  
Sbjct: 71  MQHENVIGLLDVFTSAVSGDEFQD--------FYLVMPYMQTDLQKIMGHPLSEDKVQYL 122

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   +IH DLKP N+                         + +   +K+
Sbjct: 123 VYQMLCGLKYIHSAGIIHRDLKPGNL------------------------AVNEDCELKI 158

Query: 235 IDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
           +DFG     +   +  V TR YRAPEVIL  + ++   D+WSVGCI+ E+ TG+ LF+  
Sbjct: 159 LDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK 218

Query: 294 ENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL 352
           + L+ L  + +  G P PE + +   +  + Y                  IK++ K  R 
Sbjct: 219 DYLDQLTQILKVTGVPGPEFVQKLEDKAAKSY------------------IKSLPKYPR- 259

Query: 353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           K+  S    +A     DLL  +L  D  +RLTA +AL HP+F +  +
Sbjct: 260 KDF-STLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score =  111 bits (280), Expect = 9e-28
 Identities = 89/353 (25%), Positives = 148/353 (41%), Gaps = 80/353 (22%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-------SIRKYRDAAMIEID 114
            ++ PRY+ LS +GEG +G V     + T  +VAIK +          R  R     EI 
Sbjct: 1   FDVGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLR-----EIK 55

Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L+   K++       +     F+  N + IV E +   L+  +K         D ++ F
Sbjct: 56  ILRRF-KHENIIGILDIIRPPSFESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYF 111

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL ++                   C      +K+
Sbjct: 112 LYQILRGLKYIHSANVLHRDLKPSNLLLNTN-------------------C-----DLKI 147

Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     +  H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 148 CDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNR 207

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            LF   + L  L ++   LG          +   E                    I +++
Sbjct: 208 PLFPGKDYLHQLNLILGVLG----------TPSQEDL----------------NCIISLR 241

Query: 348 KLDRLKNM-----VSLH--VDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
             + +K++     V  +     A     DLL  +L ++P +R+T  +AL HP+
Sbjct: 242 ARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPY 294

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score =  110 bits (277), Expect = 2e-27
 Identities = 93/347 (26%), Positives = 153/347 (44%), Gaps = 68/347 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKND 123
           +Y+ L+K+G+GTFG V +   ++T++ VA+K V    +   +   A+ EI +LQ L   +
Sbjct: 13  KYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHEN 72

Query: 124 KGGSSHCVQIRN-----WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                + ++I       +  Y+    +VFE     L   L  NK   F +  +++  + L
Sbjct: 73  ---VVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLS-NKNVKFTLSEIKKVMKML 128

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H  +++H D+K  NIL+                         K   +KL DFG
Sbjct: 129 LNGLYYIHRNKILHRDMKAANILIT------------------------KDGILKLADFG 164

Query: 239 -------STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALF 290
                  S       +++ V T  YR PE++LG   +  P DMW  GCI+ E+ T   + 
Sbjct: 165 LARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIM 224

Query: 291 QTHENLEHLAMMERALGPL-PEHMIRRASRGTEKY--FRRGSRLNWPEGAVSRESIKAVK 347
           Q +     L ++ +  G + PE        G +K   F+   ++  P+G       +  K
Sbjct: 225 QGNTEQHQLTLISQLCGSITPE-----VWPGVDKLELFK---KMELPQG-------QKRK 269

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
             +RLK  V            DL+  LL  DP++R+ A  ALNH FF
Sbjct: 270 VKERLKPYVKDP------HALDLIDKLLVLDPAKRIDADTALNHDFF 310

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score =  109 bits (274), Expect = 2e-27
 Identities = 95/336 (28%), Positives = 147/336 (43%), Gaps = 63/336 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA---AMIEIDVLQHLAKNDK 124
           Y  L K+GEGT+  V +   + T+  VA+K +R +     A   A+ E+ +L++L     
Sbjct: 7   YVKLDKLGEGTYATVFKGRSKLTENLVALKEIR-LEHEEGAPCTAIREVSLLKNLKH--- 62

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESV 182
              ++ V + +       + +VFE L   L  +L    N      +  V+ F  QLL  +
Sbjct: 63  ---ANIVTLHDIIHTERCLTLVFEYLDSDLKQYLDNCGNLMS---MHNVKIFMFQLLRGL 116

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
           +Y H  +++H DLKP+N+L+             +  GE+           KL DFG   +
Sbjct: 117 SYCHKRKILHRDLKPQNLLI-------------NEKGEL-----------KLADFGLARA 152

Query: 240 TAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +   + +S+ V T  YR P+V+LG   +S P DMW VGCIL E+ TG  +F      E 
Sbjct: 153 KSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEE 212

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
           L ++ R LG   E                     WP G  S E  ++          +  
Sbjct: 213 LHLIFRLLGTPTEE-------------------TWP-GITSNEEFRSYLFPQYRAQPLIN 252

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           H  R  +   DLL  LL Y+   R++A  AL H +F
Sbjct: 253 HAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF 288

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  108 bits (272), Expect = 2e-27
 Identities = 68/227 (29%), Positives = 109/227 (48%), Gaps = 39/227 (17%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA---AMIEIDVLQHLAKND 123
            Y++   +G G FG V +  + +T + VAIK +   +   +A    M EID+L++L    
Sbjct: 1   NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHP- 59

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                + V+     +  + + I+ E     SL   +K  K+ PFP  LV  +  Q+L+ +
Sbjct: 60  -----NIVKYIGSIETSDSLYIILEYAENGSLRQIIK--KFGPFPESLVAVYVYQVLQGL 112

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           AY+H+  +IH D+K  NIL                          K   +KL DFG +T 
Sbjct: 113 AYLHEQGVIHRDIKAANILT------------------------TKDGVVKLADFGVATK 148

Query: 242 FDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
            ++ +    S+V T ++ APEVI   G S   D+WS+GC ++EL TG
Sbjct: 149 LNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTG 195

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score =  109 bits (275), Expect = 3e-27
 Identities = 101/361 (27%), Positives = 154/361 (42%), Gaps = 89/361 (24%)

Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQ 117
           G+    ++ I+ ++GEGT+G+V +  D+ T E VA+K VR   +   +   A+ EI +L+
Sbjct: 2   GKRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILR 61

Query: 118 HLAKN----------DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
            L             DK  +    + +  F       +VFE +   L   L+ +    F 
Sbjct: 62  QLNHRNIVNLKEIVTDKQDALDFKKDKGAF------YLVFEYMDHDLMGLLE-SGLVHFS 114

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
            D ++ F +QLLE + Y H    +H D+K  NILL             ++ G+       
Sbjct: 115 EDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL-------------NNKGQ------- 154

Query: 228 KSSAIKLIDFGSTAF----DNQNHSSIVSTRHYRAPEVILGLGWSYPC-DMWSVGCILVE 282
               IKL DFG        +++ +++ V T  YR PE++LG     P  D+WS GCIL E
Sbjct: 155 ----IKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGE 210

Query: 283 LCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRE 341
           L T + +FQ ++ L  L ++ R  G P P                      WP+      
Sbjct: 211 LFTKKPIFQANQELAQLELISRLCGSPCPA--------------------VWPD------ 244

Query: 342 SIKAVKKLDRLKNMVSLHVDRAR---------STLTDLLHGLLRYDPSERLTARQALNHP 392
               V KL     M      R R         +   DLL  +L  DPS+R TA +ALN P
Sbjct: 245 ----VIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSP 300

Query: 393 F 393
           +
Sbjct: 301 W 301

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score =  110 bits (277), Expect = 3e-27
 Identities = 90/356 (25%), Positives = 153/356 (42%), Gaps = 96/356 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G+V   +D +T  +VAIK         + + R YR     E+ +L+H
Sbjct: 16  RYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYR-----ELRLLKH 70

Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHIC------------------IVFEKLGPSLFDFLKR 160
           +                  D+ N I                   +V   +G  L + +K 
Sbjct: 71  M------------------DHENVIGLLDVFTPASSLEDFQDVYLVTHLMGADLNNIVKC 112

Query: 161 NKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE 220
            K      D ++    Q+L  + Y+H   +IH DLKP NI                    
Sbjct: 113 QK---LSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNI-------------------- 149

Query: 221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCI 279
                + +   +K++DFG     +   +  V+TR YRAPE++L  + ++   D+WSVGCI
Sbjct: 150 ----AVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCI 205

Query: 280 LVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVS 339
           + EL TG+ LF   ++++ L  +   +G   E ++++ S                E A  
Sbjct: 206 MAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISS---------------ESA-- 248

Query: 340 RESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
           R  I+++ ++ + K+   +    A     DLL  +L  DP +R+TA +AL HP+  
Sbjct: 249 RNYIQSLPQMPK-KDFKEVFS-GANPLAIDLLEKMLVLDPDKRITAAEALAHPYLA 302

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score =  109 bits (273), Expect = 3e-27
 Identities = 89/338 (26%), Positives = 145/338 (42%), Gaps = 60/338 (17%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKN 122
           +Y+ ++++G G +G V +  D  +   VA+K VR ++   D   +    E+ +L+ L   
Sbjct: 1   QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VQTNEDGLPLSTVREVALLKRLEAF 59

Query: 123 DKGGSSH----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           D          C   R   D    + +VFE +   L  +L +      P + +++  RQ 
Sbjct: 60  DHPNIVRLMDVCATSRT--DRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQF 117

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLID 236
           L  + ++H   ++H DLKPENIL+ S   +KL   G  R  S +M               
Sbjct: 118 LRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMAL------------- 164

Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                      + +V T  YRAPEV+L   ++ P DMWSVGCI  E+   + LF  +   
Sbjct: 165 -----------TPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA 213

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           + L  +   +G  PE    R              +  P GA S    + V+ +       
Sbjct: 214 DQLGKIFDLIGLPPEDDWPR-------------DVTLPRGAFSPRGPRPVQSV------- 253

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
              V     +   LL  +L ++P +R++A +AL HPFF
Sbjct: 254 ---VPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF 288

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  108 bits (273), Expect = 3e-27
 Identities = 59/251 (23%), Positives = 103/251 (41%), Gaps = 59/251 (23%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYR--DAAMIEIDVLQHLAKND 123
           +K    +GEG+F  V+   +++T +  AIK++  R + K +      IE +VL  L    
Sbjct: 3   FKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN--- 59

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
             G    +++   F    ++  V E      L  +++  KY        R +  ++L ++
Sbjct: 60  --GHPGIIKLYYTFQDEENLYFVLEYAPNGELLQYIR--KYGSLDEKCTRFYAAEILLAL 115

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            Y+H   +IH DLKPENILL                 +M          IK+ DFG+   
Sbjct: 116 EYLHSKGIIHRDLKPENILL---------------DKDM---------HIKITDFGTAKV 151

Query: 243 DN-----------------------QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 279
            +                       +  +S V T  Y +PE++         D+W++GCI
Sbjct: 152 LDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCI 211

Query: 280 LVELCTGEALF 290
           + ++ TG+  F
Sbjct: 212 IYQMLTGKPPF 222

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score =  108 bits (271), Expect = 6e-27
 Identities = 94/352 (26%), Positives = 146/352 (41%), Gaps = 92/352 (26%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----------SIRKYRDAAMIEIDVLQ 117
           YK L K+GEG++  V +   + T + VA+K +R          +IR        E  +L+
Sbjct: 7   YKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIR--------EASLLK 58

Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFG 175
            L   +       V + +    +  + +VFE L   L  ++     C   + +  VR F 
Sbjct: 59  DLKHAN------IVTLHDIIHTKKTLTLVFEYLDTDLKQYMDD---CGGGLSMHNVRLFL 109

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            QLL  +AY H  R++H DLKP+N+L+             S  GE+           KL 
Sbjct: 110 FQLLRGLAYCHQRRVLHRDLKPQNLLI-------------SERGEL-----------KLA 145

Query: 236 DFG---STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQ 291
           DFG   + +  ++ +S+ V T  YR P+V+LG   +S   DMW VGCI  E+ TG  LF 
Sbjct: 146 DFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFP 205

Query: 292 THEN-LEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA---- 345
              +  + L  + R LG P  E                     WP G  S    K     
Sbjct: 206 GSTDVEDQLHKIFRVLGTPTEE--------------------TWP-GVSSNPEFKPYSFP 244

Query: 346 ---VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
               + L      +            +L    L+Y+P +R++A +A+ HP+F
Sbjct: 245 FYPPRPLINHAPRLDRIPHGE-----ELALKFLQYEPKKRISAAEAMKHPYF 291

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score =  108 bits (272), Expect = 1e-26
 Identities = 89/338 (26%), Positives = 159/338 (47%), Gaps = 62/338 (18%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ L+ +G G +G V   +D + +++VA+K        ++ + R YR     E+ +L+H
Sbjct: 16  RYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYR-----ELRLLKH 70

Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      + V+    QL
Sbjct: 71  MKHENVIGLLDVFTPATSIENFNEVYLVTNLMGADLNNIVKCQKLSD---EHVQFLIYQL 127

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   ++++DFG
Sbjct: 128 LRGLKYIHSAGIIHRDLKPSNV------------------------AVNEDCELRILDFG 163

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL  G+ALF  ++ ++
Sbjct: 164 LARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID 223

Query: 298 HLA-MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
            L  +ME    P PE + + +S    KY +  S  + P+        + +KK+ R  N +
Sbjct: 224 QLKRIMEVVGTPSPEVLKKISSEHARKYIQ--SLPHMPQ--------QDLKKIFRGANPL 273

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           ++          DLL  +L  D  +R++A +AL HP+F
Sbjct: 274 AI----------DLLEKMLVLDSDKRISASEALAHPYF 301

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score =  106 bits (267), Expect = 4e-26
 Identities = 91/340 (26%), Positives = 142/340 (41%), Gaps = 67/340 (19%)

Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDV 115
           +T RY  L  +G G FG V    D+ T + VAIK         V + R YR     E+ +
Sbjct: 8   ITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYR-----ELKL 62

Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 175
           L+HL   +    S       +      I  V E LG  L   L      P     ++ F 
Sbjct: 63  LKHLRHENIISLSDI-----FISPLEDIYFVTELLGTDLHRLLTSR---PLEKQFIQYFL 114

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            Q+L  + Y+H   ++H DLKP NIL+                         ++  +K+ 
Sbjct: 115 YQILRGLKYVHSAGVVHRDLKPSNILI------------------------NENCDLKIC 150

Query: 236 DFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHE 294
           DFG     +   +  VSTR+YRAPE++L    +    D+WS GCI  E+  G+ LF   +
Sbjct: 151 DFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKD 210

Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD-RLK 353
           ++   +++   LG  P+ +I                        S  +++ V+ L  R  
Sbjct: 211 HVNQFSIITDLLGTPPDDVINTIC--------------------SENTLRFVQSLPKREP 250

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
              S     A  +  DLL  +L +DP +R++A +AL HP+
Sbjct: 251 VPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score =  106 bits (265), Expect = 4e-26
 Identities = 95/341 (27%), Positives = 151/341 (44%), Gaps = 63/341 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA---AMIEIDVLQHLAKNDK 124
           Y  L K+GEGT+  V +   + T   VA+K +R +     A   A+ E+ +L+ L     
Sbjct: 8   YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIR-LEHEEGAPCTAIREVSLLKDLKH--- 63

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQLLESV 182
              ++ V + +       + +VFE L   L  +L     C   +++  V+ F  QLL  +
Sbjct: 64  ---ANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDD---CGNSINMHNVKLFLFQLLRGL 117

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
            Y H  +++H DLKP+N+L+             +  GE+           KL DFG   +
Sbjct: 118 NYCHRRKVLHRDLKPQNLLI-------------NERGEL-----------KLADFGLARA 153

Query: 240 TAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +   + +S+ V T  YR P+++LG   +S   DMW VGCI  E+ TG  LF      E 
Sbjct: 154 KSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQ 213

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
           L  + R LG   E                     WP G +S E  K+        + +  
Sbjct: 214 LHFIFRILGTPTEE-------------------TWP-GILSNEEFKSYNYPKYRADCLHN 253

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           H  R  S   +LL  LL+++  +R++A +A+ HP+F  L E
Sbjct: 254 HAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLGE 294

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score =  105 bits (264), Expect = 6e-26
 Identities = 83/338 (24%), Positives = 133/338 (39%), Gaps = 96/338 (28%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           YK L K+GEG  G V +  DR T + VAIK +R  ++ ++  + EI +++          
Sbjct: 21  YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMK---------D 71

Query: 128 SHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREF----GRQLL 179
                I +++D     + + +V E + G SL D + +N      V +         R++L
Sbjct: 72  CKHPNIVDYYDSYLVGDELWVVMEYMDGGSLTDIITQN-----FVRMNEPQIAYVCREVL 126

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           + + Y+H   +IH D+K +NILL             S  G            +KL DFG 
Sbjct: 127 QGLEYLHSQNVIHRDIKSDNILL-------------SKDGS-----------VKLADFGF 162

Query: 240 TAFDNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
            A   +  S   S+V T ++ APEVI    +    D+WS+G + +E+  GE         
Sbjct: 163 AAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE--------- 213

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
                        P ++                R   P  A+   + K +  L       
Sbjct: 214 -------------PPYL----------------REP-PLRALFLITTKGIPPLKN-PEKW 242

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           S           D L+  L  DP +R +A + L HPF 
Sbjct: 243 S-------PEFKDFLNKCLVKDPEKRPSAEELLQHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  104 bits (262), Expect = 8e-26
 Identities = 82/338 (24%), Positives = 133/338 (39%), Gaps = 86/338 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
           R++  +K+G GTFG+V    +  T E +A+K +R   +  K       E+ VL+ L K+ 
Sbjct: 1   RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELL-KHP 59

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                + V++     +R  + I  E   G +L + L+  +     V  +R +  QLLE +
Sbjct: 60  NLVKYYGVEV-----HREKVYIFMEYCSGGTLEELLEHGRILDEHV--IRVYTLQLLEGL 112

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
           AY+H   ++H D+KP NI L  +  IKL  +                 A+KL +  +T  
Sbjct: 113 AYLHSHGIVHRDIKPANIFLDHNGVIKLGDF---------------GCAVKLKNNTTTMG 157

Query: 243 DNQNHSSIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILVELCTG----EALFQTHEN 295
           +      +  T  Y APEVI G    G     D+WS+GC+++E+ TG      L    + 
Sbjct: 158 EEVQS--LAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQI 215

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           + H+    +   P+P+                                            
Sbjct: 216 MFHVGAGHKP--PIPDS------------------------------------------- 230

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                 +      D L   L  DP +R TA + L HPF
Sbjct: 231 -----LQLSPEGKDFLDRCLESDPKKRPTASELLQHPF 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score =  106 bits (266), Expect = 9e-26
 Identities = 94/356 (26%), Positives = 152/356 (42%), Gaps = 84/356 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ L  +G G  G V   +D  T + VAIK        V  + R YR+  ++++  + H
Sbjct: 17  RYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKL--VNH 74

Query: 119 LAKNDKGGSSHCVQIRNWF------DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVR 172
             KN        + + N F      +    + +V E +  +L   ++         DL  
Sbjct: 75  --KN-------IIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQM--------DLDH 117

Query: 173 E----FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
           E       Q+L  + ++H   +IH DLKP NI++ S                    C   
Sbjct: 118 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS-------------------DC--- 155

Query: 229 SSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
              +K++DFG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+  G
Sbjct: 156 --TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRG 213

Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
             LF   ++++    +   LG   +  + R       Y       N P     + +  + 
Sbjct: 214 TVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVE-----NRP-----KYAGYSF 263

Query: 347 KKL--DRL-----KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
           ++L  D L     ++   L   +AR    DLL  +L  DP +R++   AL HP+  
Sbjct: 264 EELFPDVLFPPDSESHNKLKASQAR----DLLSKMLVIDPEKRISVDDALQHPYIN 315

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score =  104 bits (261), Expect = 2e-25
 Identities = 90/339 (26%), Positives = 152/339 (44%), Gaps = 61/339 (17%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRD---AAMIEIDVLQHLAKN 122
           +Y+ ++++GEG +G+V +  D +   R VA+K VR          + + E+ VL+HL   
Sbjct: 2   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 61

Query: 123 DKGGSSH----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +          C   R   D    + +VFE +   L  +L +      P + +++   QL
Sbjct: 62  EHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 119

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + ++H  R++H DLKP+NIL+ SS                          IKL DFG
Sbjct: 120 LRGLDFLHSHRVVHRDLKPQNILVTSS------------------------GQIKLADFG 155

Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
            +  +  Q   +S+V T  YRAPEV+L   ++ P D+WSVGCI  E+   + LF+   ++
Sbjct: 156 LARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 215

Query: 297 EHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           + L  +   +G P  E                    +WP            K    ++  
Sbjct: 216 DQLGKILDVIGLPGEE--------------------DWPRDVALPRQAFHSKSAQPIEKF 255

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           V+   +  +    DLL   L ++P++R++A  AL+HP+F
Sbjct: 256 VTDIDELGK----DLLLKCLTFNPAKRISAYSALSHPYF 290

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score =  103 bits (260), Expect = 4e-25
 Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 62/353 (17%)

Query: 67  RYKILSKMGEGTFGRVLECW--DRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLA 120
           +Y+I   +G GT+GRV +    + +  +  AIK  +  ++       +A  EI +L+ L 
Sbjct: 1   KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLREL- 59

Query: 121 KNDKGGSSHCVQIRNWF--DYRNHICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFG 175
           K++     + V +   F       + ++F+     L+  +K   + K    P  +V+   
Sbjct: 60  KHE-----NVVSLVEVFLEHADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLL 114

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            Q+L  V Y+H   ++H DLKP NIL++                       P+   +K+ 
Sbjct: 115 WQILNGVHYLHSNWVLHRDLKPANILVMGEG--------------------PERGVVKIG 154

Query: 236 DFG-STAFDNQ-----NHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEA 288
           D G +  F+       +   +V T  YRAPE++LG   ++   D+W++GCI  EL T E 
Sbjct: 155 DLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEP 214

Query: 289 LFQTHE------NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES 342
           +F+  E      N      +ER      E +      GT            PE     + 
Sbjct: 215 IFKGREAKIKKSNPFQRDQLERIF----EVL------GTPTEKDWPDIKKMPEYDTLMKD 264

Query: 343 IKAVK-KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K      + L   +  H     S   DLL  LL YDP++R+TA +AL HP+F
Sbjct: 265 FKTKTYPSNSLAKWMEKHKKPD-SQGFDLLRKLLEYDPTKRITAEEALEHPYF 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score =  102 bits (255), Expect = 5e-25
 Identities = 67/225 (29%), Positives = 100/225 (44%), Gaps = 45/225 (20%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV------RSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           +G+G FGRV  C+D  T   +A+K V         +K  +A   EI +L++L        
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHE----- 64

Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
              VQ          + I  E + G S+ D LK   Y      + R++ RQ+LE V Y+H
Sbjct: 65  -RIVQYYGCLRDDETLSIFMEYMPGGSVKDQLK--AYGALTETVTRKYTRQILEGVEYLH 121

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA----- 241
              ++H D+K  NIL             R S+G            +KL DFG++      
Sbjct: 122 SNMIVHRDIKGANIL-------------RDSAGN-----------VKLGDFGASKRLQTI 157

Query: 242 -FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
                   S+  T ++ +PEVI G G+    D+WSVGC +VE+ T
Sbjct: 158 CSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLT 202

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score =  101 bits (253), Expect = 1e-24
 Identities = 80/336 (23%), Positives = 122/336 (36%), Gaps = 102/336 (30%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI------EIDVLQHLAKNDKGGS 127
           +G G+FG V E  +    +  A+K V      +           EI +L  L        
Sbjct: 8   LGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKL-------- 59

Query: 128 SH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            H   VQ        +++ I  E + G SL   LK  KY  FP  ++R + RQ+L  + Y
Sbjct: 60  QHPNIVQYLGTEREEDNLYIFLELVPGGSLAKLLK--KYGSFPEPVIRLYTRQILLGLEY 117

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG----ST 240
           +HD   +H D+K  NIL                        +  +  +KL DFG      
Sbjct: 118 LHDRNTVHRDIKGANIL------------------------VDTNGVVKLADFGMAKQVV 153

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
            F      S   + ++ APEVI   G +    D+WS+GC ++E+ TG+  +   E +  +
Sbjct: 154 EFSFA--KSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAV 211

Query: 300 AMMER--ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
             + R   L P+P+H+   A                                        
Sbjct: 212 FKIGRSKELPPIPDHLSDEAK--------------------------------------- 232

Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                      D +   L+ DPS R TA + L HPF
Sbjct: 233 -----------DFILKCLQRDPSLRPTAAELLEHPF 257

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score =  100 bits (252), Expect = 7e-24
 Identities = 89/351 (25%), Positives = 147/351 (41%), Gaps = 69/351 (19%)

Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDV 115
           +  +Y  +  +G G +G V    + +T E+VAIK         + + R  R     EI +
Sbjct: 3   VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLR-----EIKL 57

Query: 116 LQHLAKNDKGGSSHCVQ--IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
           L+HL   +       +    R  F   N + IV+E +   L   ++ ++      D  + 
Sbjct: 58  LRHLDHENVIAIKDIMPPPHREAF---NDVYIVYELMDTDLHQIIRSSQ--TLSDDHCQY 112

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F  QLL  + Y+H   ++H DLKP N+LL ++                   C      +K
Sbjct: 113 FLYQLLRGLKYIHSANVLHRDLKPSNLLLNAN-------------------CD-----LK 148

Query: 234 LIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEAL 289
           + DFG     ++     +  V TR YRAPE++L    ++   D+WSVGCI  EL   + L
Sbjct: 149 ICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPL 208

Query: 290 FQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
           F   + +  L ++   LG P  E +    +    +Y R             R+S   +  
Sbjct: 209 FPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPY-------TPRQSFARL-- 259

Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                         A     DLL  +L +DPS+R+T  +AL HP+  +L++
Sbjct: 260 -----------FPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHD 299

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score = 98.3 bits (245), Expect = 1e-23
 Identities = 78/337 (23%), Positives = 132/337 (39%), Gaps = 88/337 (26%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN-----DKG 125
           L  + +G FG V     R T +  AIKV++       + MI  + + ++         +G
Sbjct: 1   LKPISKGAFGSVYLAKKRSTGDYFAIKVLKK------SDMIAKNQVTNVKAERAIMMIQG 54

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S +  ++   F  ++++ +V E L G      +K       P D  +++  +++  V  
Sbjct: 55  ESPYVAKLYYSFQSKDYLYLVMEYLNGGDCASLIK--TLGGLPEDWAKQYIAEVVLGVED 112

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H   +IH D+KPEN+L+  +  +KL  +  S +G    +                    
Sbjct: 113 LHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKK-------------------- 152

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMER 304
                 V T  Y APE ILG+G     D WS+GC++ E   G   F              
Sbjct: 153 -----FVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAET---------- 197

Query: 305 ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR 364
                P+ +                R+NWPE      S +AV                  
Sbjct: 198 -----PDAVFDNILSR---------RINWPEEVKEFCSPEAV------------------ 225

Query: 365 STLTDLLHGLLRYDPSERLTA---RQALNHPFFRNLN 398
               DL++ LL  DP++RL A   ++  +HPFF+++N
Sbjct: 226 ----DLINRLLCMDPAKRLGANGYQEIKSHPFFKSIN 258

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 99.4 bits (248), Expect = 2e-23
 Identities = 90/359 (25%), Positives = 148/359 (41%), Gaps = 97/359 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQT--QERVAIKVV-----RSIRKYRDAAMIEIDVLQHL 119
           RY+++ ++G+G +G V    + +T  +E VAIK +     + I   R  A+ E+ +L+H 
Sbjct: 1   RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKR--ALRELKLLRHF 58

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYC---PFPVDL------ 170
             +          I   +D      IVF    P  F+ L    Y        DL      
Sbjct: 59  RGHK--------NITCLYDMD----IVF----PGNFNEL----YLYEELMEADLHQIIRS 98

Query: 171 --------VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP 222
                    + F  Q+L  + Y+H   ++H DLKP N+L+             ++  E+ 
Sbjct: 99  GQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLV-------------NADCEL- 144

Query: 223 FRCLPKSSAIKLIDFG------STAFDNQNH-SSIVSTRHYRAPEVILGL-GWSYPCDMW 274
                     K+ DFG          +N    +  V+TR YRAPE++L    ++   D+W
Sbjct: 145 ----------KICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVW 194

Query: 275 SVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWP 334
           SVGCIL EL   + +F+  + ++ L  + + LG   E  + R   G+ K       L   
Sbjct: 195 SVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRI--GSPKAQNYIRSLPNI 252

Query: 335 EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                             K   S+  + A     DLL  LL +DP++R++  +AL HP+
Sbjct: 253 PK----------------KPFESIFPN-ANPLALDLLEKLLAFDPTKRISVEEALEHPY 294

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score =  100 bits (251), Expect = 2e-23
 Identities = 89/365 (24%), Positives = 154/365 (42%), Gaps = 106/365 (29%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-------- 119
           YK+ + +G G+FG V E     T E+VAIK V    +Y++  ++ +  L H+        
Sbjct: 68  YKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDPQYKNRELLIMKNLNHINIIFLKDY 127

Query: 120 ------AKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLK---RNKYCPFPVDL 170
                  KN+K          N F     + +V E +  ++  ++K   RN +   P+ L
Sbjct: 128 YYTECFKKNEK----------NIF-----LNVVMEFIPQTVHKYMKHYARNNHA-LPLFL 171

Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           V+ +  QL  ++AY+H   + H DLKP+N+L+                        P + 
Sbjct: 172 VKLYSYQLCRALAYIHSKFICHRDLKPQNLLID-----------------------PNTH 208

Query: 231 AIKLIDFGSTA--FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGE 287
            +KL DFGS       Q   S + +R YRAPE++LG   ++   D+WS+GCI+ E+  G 
Sbjct: 209 TLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGY 268

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRR-------------ASRGTEKYFRRGSRLNWP 334
            +F    +++ L  + + LG   E  ++                +  +K F +G+    P
Sbjct: 269 PIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGT----P 324

Query: 335 EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + A+                              + +   L+Y+P +RL   +AL  PFF
Sbjct: 325 DDAI------------------------------NFISQFLKYEPLKRLNPIEALADPFF 354

Query: 395 RNLNE 399
            +L +
Sbjct: 355 DDLRD 359

Length = 440

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 97.7 bits (244), Expect = 4e-23
 Identities = 61/232 (26%), Positives = 93/232 (40%), Gaps = 49/232 (21%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDK 124
            + +L  +G+G+FG V +  D++T + VAIKV+       +   I  EI  L        
Sbjct: 2   LFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQC----- 56

Query: 125 GGSSHCVQIRNWF-----DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                   I  ++       +  + I+ E   G S  D LK           +    R++
Sbjct: 57  ----RSPYITKYYGSFLKGSK--LWIIMEYCGGGSCLDLLK---PGKLDETYIAFILREV 107

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H+   IH D+K  NILL             S  G+           +KL DFG
Sbjct: 108 LLGLEYLHEEGKIHRDIKAANILL-------------SEEGD-----------VKLADFG 143

Query: 239 STAFDNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
            +       S   + V T  + APEVI   G+    D+WS+G   +EL  GE
Sbjct: 144 VSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGE 195

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score = 95.4 bits (238), Expect = 2e-22
 Identities = 80/336 (23%), Positives = 127/336 (37%), Gaps = 90/336 (26%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKNDKGGSSHC 130
           G G FGRV     +      A+K V  R I +      I  E ++L+             
Sbjct: 2   GVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN------HPFI 55

Query: 131 VQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR 189
           V++   F  + +I ++ E  LG  L+  L+      F     R +   ++ +  Y+H+  
Sbjct: 56  VKLYRTFKDKKYIYMLMEYCLGGELWTILRDRGL--FDEYTARFYIACVVLAFEYLHNRG 113

Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST--AFDNQNH 247
           +I+ DLKPEN+LL S+      GY                  +KL+DFG        Q  
Sbjct: 114 IIYRDLKPENLLLDSN------GY------------------VKLVDFGFAKKLKSGQKT 149

Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG 307
            +   T  Y APE+IL  G+ +  D WS+G +L EL TG   F   ++ + + +    L 
Sbjct: 150 WTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGE-DDEDPMEIYNDIL- 207

Query: 308 PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL 367
                      +G  K       L +P              +D+           A+   
Sbjct: 208 -----------KGNGK-------LEFP------------NYIDK----------AAK--- 224

Query: 368 TDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
            DL+  LLR +P ERL       +    H +F   +
Sbjct: 225 -DLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFD 259

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 97.2 bits (242), Expect = 2e-22
 Identities = 85/354 (24%), Positives = 147/354 (41%), Gaps = 74/354 (20%)

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK--VVRSIRKYRDAAMIEIDVLQHLA 120
           +L  RY  L  +G G+ G V    D    +RVA+K  V+   +  +  A+ EI +++ L 
Sbjct: 2   DLGSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVK-HALREIKIIRRLD 60

Query: 121 KND---------KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLV 171
            ++           GS     + +  +  + + IV E +   L + L++    P   +  
Sbjct: 61  HDNIVKVYEVLGPSGSDLTEDVGSLTELNS-VYIVQEYMETDLANVLEQG---PLSEEHA 116

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
           R F  QLL  + Y+H   ++H DLKP N+ + + + +                       
Sbjct: 117 RLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLV----------------------- 153

Query: 232 IKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELC 284
           +K+ DFG     + ++      S  + T+ YR+P ++L    ++   DMW+ GCI  E+ 
Sbjct: 154 LKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEML 213

Query: 285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRG----TEKYFRRGSRLNWPEGAVSR 340
           TG+ LF     LE    M+  L  +P  ++R   R         F R        G   R
Sbjct: 214 TGKPLFAGAHELE---QMQLILESVP--VVREEDRNELLNVIPSFVRND------GGEPR 262

Query: 341 ESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
             ++     D L  +    +        D L  +L ++P +RLTA +AL HP+ 
Sbjct: 263 RPLR-----DLLPGVNPEAL--------DFLEQILTFNPMDRLTAEEALMHPYM 303

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 95.1 bits (236), Expect = 5e-22
 Identities = 90/339 (26%), Positives = 149/339 (43%), Gaps = 63/339 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA---AMIEIDVLQHLAKNDK 124
           Y  L K+GEGT+  V +   + T+  VA+K +R +     A   A+ E+ +L+ L     
Sbjct: 8   YIKLEKLGEGTYATVFKGRSKLTENLVALKEIR-LEHEEGAPCTAIREVSLLKDLKH--- 63

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQLLESV 182
              ++ V + +       + +VFE L   L  ++     C   + +  V+ F  Q+L  +
Sbjct: 64  ---ANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDD---CGNIMSMHNVKIFLYQILRGL 117

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
           AY H  +++H DLKP+N+L+             +  GE+           KL DFG   +
Sbjct: 118 AYCHRRKVLHRDLKPQNLLI-------------NERGEL-----------KLADFGLARA 153

Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +   + +S+ V T  YR P+V+LG   +S   DMW VGCI  E+ +G  LF      + 
Sbjct: 154 KSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDE 213

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
           L ++ R LG   E                     WP G  S +  K           +  
Sbjct: 214 LHLIFRLLGTPTEE-------------------TWP-GISSNDEFKNYNFPKYKPQPLIN 253

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           H  R  +   +LL   L+Y+  +R++A +A+ H +FR+L
Sbjct: 254 HAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSL 292

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 96.0 bits (239), Expect = 5e-22
 Identities = 84/347 (24%), Positives = 137/347 (39%), Gaps = 87/347 (25%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMI----------EIDV 115
           +G G FG V    D +  +RVA+K        +V   R +R+  M+           +D+
Sbjct: 8   IGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDI 67

Query: 116 LQ--HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
           LQ  H+                  D    I +V E +   L   +   +  P   D V+ 
Sbjct: 68  LQPPHI------------------DPFEEIYVVTELMQSDLHKIIVSPQ--PLSSDHVKV 107

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F  Q+L  + Y+H   ++H D+KP N+L+ S+                   C+     +K
Sbjct: 108 FLYQILRGLKYLHSAGILHRDIKPGNLLVNSN-------------------CV-----LK 143

Query: 234 LIDFGSTAFDNQNHSSI----VSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEA 288
           + DFG    +  + S      V T++YRAPE+++G   ++   D+WSVGCI  EL     
Sbjct: 144 ICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRI 203

Query: 289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
           LFQ    ++ L ++   LG      +R A  G   +  RG                    
Sbjct: 204 LFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRG------------------PH 245

Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                 ++     +A      LL  +L +DP +R++A  AL HP+  
Sbjct: 246 KPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLD 292

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 93.3 bits (232), Expect = 8e-22
 Identities = 63/232 (27%), Positives = 108/232 (46%), Gaps = 37/232 (15%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSI-RKYRDAAMIEIDVLQHLAKND 123
            +K+L K+G+G++G V +       +  A+K V   S+ +K R+ A+ EI +L  +    
Sbjct: 1   DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN--- 57

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYC--PFPVDLVREFGRQLL 179
                + +  +  F   N +CIV E    G  L   + + K      P   +     QLL
Sbjct: 58  ---HPNIISYKEAFLDGNKLCIVMEYAPFG-DLSKAISKRKKKRKLIPEQEIWRIFIQLL 113

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
             +  +H+ +++H DLK  NILLV+++ +K+        G++    + K +  K      
Sbjct: 114 RGLQALHEQKILHRDLKSANILLVANDLVKI--------GDLGISKVLKKNMAK------ 159

Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
                    + + T HY APEV  G  +SY  D+WS+GC+L E+ T    F+
Sbjct: 160 ---------TQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFE 202

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 93.3 bits (232), Expect = 2e-21
 Identities = 87/334 (26%), Positives = 133/334 (39%), Gaps = 77/334 (23%)

Query: 77  GTFGRVLECWDRQTQERVAIKVVRS----IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           G +G V     ++T++R A+K +      +R       +E D+L   A+N    S  C  
Sbjct: 12  GAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILT-FAENPFVVSMFCS- 69

Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
               F+ + H+C+V E + G      LK       PVD+ R +  + + ++ Y+H+  ++
Sbjct: 70  ----FETKRHLCMVMEYVEGGDCATLLK--NIGALPVDMARMYFAETVLALEYLHNYGIV 123

Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS--S 249
           H DLKP+N+L+ S   IKL  +  S  G M       S    L + G    D +      
Sbjct: 124 HRDLKPDNLLITSMGHIKLTDFGLSKIGLM-------SLTTNLYE-GHIEKDTREFLDKQ 175

Query: 250 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPL 309
           +  T  Y APEVIL  G+  P D W++G IL E   G   F                G  
Sbjct: 176 VCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPF---------------FGDT 220

Query: 310 PEHMIRRASRGTEKYFRRGSRLNWPEG--AVSRESIKAVKKLDRLKNMVSLHVDRARSTL 367
           PE +  +              + WPEG  A+  ++                         
Sbjct: 221 PEELFGQVISDD---------IEWPEGDEALPADA------------------------- 246

Query: 368 TDLLHGLLRYDPSERL---TARQALNHPFFRNLN 398
            DL+  LLR +P ERL    A +   H FF  L+
Sbjct: 247 QDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLD 280

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 93.2 bits (231), Expect = 2e-21
 Identities = 92/341 (26%), Positives = 158/341 (46%), Gaps = 64/341 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-------SIRKYRDAAMIEIDVLQHLA 120
           Y+ L K+GEG++  V +   +   + VA+KV+R            R+A++++   L+H  
Sbjct: 7   YEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLK--GLKH-- 62

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                  ++ V + +    +  + +VFE +   L  ++ ++     P + V+ F  QLL 
Sbjct: 63  -------ANIVLLHDIIHTKETLTLVFEYVHTDLCQYMDKHPGGLHP-ENVKLFLFQLLR 114

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
            ++Y+H   ++H DLKP+N+L+             S +GE+           KL DFG  
Sbjct: 115 GLSYIHQRYILHRDLKPQNLLI-------------SDTGEL-----------KLADFGLA 150

Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPC-DMWSVGCILVELCTGEALFQTHENL 296
            + +  +  +S+ V T  YR P+V+LG      C DMW VGCI VE+  G A F   +++
Sbjct: 151 RAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI 210

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           +    +ER    L          GT          + P     R ++ + K L +  N +
Sbjct: 211 QD--QLERIFLVL----------GTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKL 258

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           S +V+ A     DL   LL+  P  RL+A+ AL+H +F +L
Sbjct: 259 S-YVNHAE----DLASKLLQCFPKNRLSAQAALSHEYFSDL 294

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 93.9 bits (233), Expect = 3e-21
 Identities = 69/226 (30%), Positives = 103/226 (45%), Gaps = 48/226 (21%)

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 131 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 166

Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  N   +  V TR+YRAPEVILG+G+    D+WSVGCI+ EL  G  +FQ  +
Sbjct: 167 FGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 226

Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
           +++    +   LG P  E M      +R       +Y        +P+     ES     
Sbjct: 227 HIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSES----- 281

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
           + D+LK           S   DLL  +L  DP +R++  +AL HP+
Sbjct: 282 ERDKLKT----------SQARDLLSKMLVIDPDKRISVDEALRHPY 317

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score = 93.5 bits (233), Expect = 3e-21
 Identities = 81/352 (23%), Positives = 139/352 (39%), Gaps = 81/352 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKNDKG 125
            ++++  +G G FG V    D+ T +  A+KV   +RK   + MI+ + + H+ A+ D  
Sbjct: 2   DFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKV---LRK---SDMIKRNQIAHVRAERDIL 55

Query: 126 GSSHC---VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             +     V++   F    H+ +V E + G  L + L   +   FP +  R +  +L+ +
Sbjct: 56  ADADSPWIVKLYYSFQDEEHLYLVMEYMPGGDLMNLL--IRKDVFPEETARFYIAELVLA 113

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLP------GYKRSSSGEMPFRCLPKSSAIKLI 235
           +  +H L  IH D+KP+NIL+ +   IKL          ++   E              +
Sbjct: 114 LDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNV 173

Query: 236 DFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--- 290
                    +    +S V T  Y APEV+ G  +   CD WS+G IL E+  G   F   
Sbjct: 174 LVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233

Query: 291 ---QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
              +T+  + +                       ++  R       P+  VS E+I    
Sbjct: 234 TLQETYNKIINW----------------------KESLRFP-----PDPPVSPEAI---- 262

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT-ARQALNHPFFRNLN 398
                                DL+  LL  DP +RL    +  +HPFF+ ++
Sbjct: 263 ---------------------DLICRLLC-DPEDRLGSFEEIKSHPFFKGID 292

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 90.5 bits (224), Expect = 4e-20
 Identities = 100/373 (26%), Positives = 166/373 (44%), Gaps = 75/373 (20%)

Query: 43  VSPPRRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV 99
           +S  +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +
Sbjct: 1   MSRSKRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL 57

Query: 100 --------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG 151
                    + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E + 
Sbjct: 58  SRPFQNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMD 112

Query: 152 PSLFDFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSS 205
            +L   ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S 
Sbjct: 113 ANLCQVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD 162

Query: 206 EFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVIL 263
                                     +K++DFG   TA  +   +  V TR+YRAPEVIL
Sbjct: 163 ------------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198

Query: 264 GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTE 322
           G+G+    D+WSVGCI+ E+  G  LF   ++++    +   LG P PE M ++      
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVR 257

Query: 323 KYFRRGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPS 380
            Y       N P+ A       + +KL  D L    S H     S   DLL  +L  D S
Sbjct: 258 TYVE-----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307

Query: 381 ERLTARQALNHPF 393
           +R++  +AL HP+
Sbjct: 308 KRISVDEALQHPY 320

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 88.5 bits (220), Expect = 4e-20
 Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 56/234 (23%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR------SIRKYRDAAMIEIDVLQHLAK 121
           + IL K+GEG++G V +   ++T + VAIKVV        I K       EI +L+    
Sbjct: 5   FDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIK-------EISILK---- 53

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLK-RNKYCPFPVDLVREFGRQL 178
             +  S + V+    +     + IV E    G S+ D +K  NK      + +     Q 
Sbjct: 54  --QCDSPYIVKYYGSYFKNTDLWIVMEYCGAG-SVSDIMKITNK--TLTEEEIAAILYQT 108

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L+ + Y+H  + IH D+K  NILL             +  G+            KL DFG
Sbjct: 109 LKGLEYLHSNKKIHRDIKAGNILL-------------NEEGQ-----------AKLADFG 144

Query: 239 -----STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
                +     +N  +++ T  + APEVI  +G++   D+WS+G   +E+  G+
Sbjct: 145 VSGQLTDTMAKRN--TVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGK 196

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 88.9 bits (220), Expect = 6e-20
 Identities = 86/334 (25%), Positives = 141/334 (42%), Gaps = 56/334 (16%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKG 125
           Y  L K+GEG++  V +   R   + VA+KV+  ++       A+ E  +L+ L      
Sbjct: 7   YLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH---- 62

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
             ++ V + +    +  +  VFE +   L  ++ ++     P + VR F  QLL  +AY+
Sbjct: 63  --ANIVLLHDIIHTKETLTFVFEYMHTDLAQYMIQHPGGLHPYN-VRLFMFQLLRGLAYI 119

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAF 242
           H   ++H DLKP+N+L+             S  GE+           KL DFG   + + 
Sbjct: 120 HGQHILHRDLKPQNLLI-------------SYLGEL-----------KLADFGLARAKSI 155

Query: 243 DNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQ-THENLEHLA 300
            +Q +SS V T  YR P+V+LG   +S   D+W  GCI +E+  G+  F    +  E L 
Sbjct: 156 PSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLE 215

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            +   LG +P             Y         P                +   +V   +
Sbjct: 216 KIWTVLG-VPTEDTWPGVSKLPNYKPEWFLPCKP----------------QQLRVVWKRL 258

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            R      DL   +L   P +R++A+ AL HP+F
Sbjct: 259 SRPPKA-EDLASQMLMMFPKDRISAQDALLHPYF 291

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 88.1 bits (219), Expect = 6e-20
 Identities = 65/228 (28%), Positives = 96/228 (42%), Gaps = 48/228 (21%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRS-----IRKYRDAAMIEIDVLQHLAKNDKG 125
           L ++G G  G V +   R T + +A+K +R      I+K     + E+D+L         
Sbjct: 6   LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQK---QILRELDILHK------- 55

Query: 126 GSSHC---VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
              +    V     F     I I  E + G SL   LK       P  ++ +    +L+ 
Sbjct: 56  --CNSPYIVGFYGAFYNNGDISICMEYMDGGSLDKILKE-VQGRIPERILGKIAVAVLKG 112

Query: 182 VAYMH-DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
           + Y+H   ++IH D+KP NIL+             +S G+           IKL DFG S
Sbjct: 113 LTYLHEKHKIIHRDVKPSNILV-------------NSRGQ-----------IKLCDFGVS 148

Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
               N    + V T  Y APE I G  +S   D+WS+G  L+EL TG 
Sbjct: 149 GQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGR 196

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 86.8 bits (215), Expect = 2e-19
 Identities = 74/259 (28%), Positives = 114/259 (44%), Gaps = 48/259 (18%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA--MIEIDVLQHLAKNDKGGSSHCV 131
           +G+GT+G V    D  TQ R+AIK +   R  R       EI +  +L   +       V
Sbjct: 16  LGKGTYGIVYAARDLSTQVRIAIKEI-PERDSRYVQPLHEEIALHSYLKHRN------IV 68

Query: 132 QIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPV--DLVREFGRQLLESVAYMHDL 188
           Q            I  E++ G SL   L R+K+ P       +  + +Q+LE + Y+HD 
Sbjct: 69  QYLGSDSENGFFKIFMEQVPGGSLSALL-RSKWGPLKDNEQTIIFYTKQILEGLKYLHDN 127

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST---AFDNQ 245
           +++H D+K +N+L+ +                        S  +K+ DFG++   A  N 
Sbjct: 128 QIVHRDIKGDNVLVNTY-----------------------SGVVKISDFGTSKRLAGINP 164

Query: 246 NHSSIVSTRHYRAPEVI-LGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLE-HLAM- 301
              +   T  Y APEVI  G  G+  P D+WS+GC +VE+ TG+  F   E  E   AM 
Sbjct: 165 CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPF--IELGEPQAAMF 222

Query: 302 ---MERALGPLPEHMIRRA 317
              M +    +PE +   A
Sbjct: 223 KVGMFKIHPEIPESLSAEA 241

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 86.2 bits (214), Expect = 3e-19
 Identities = 64/245 (26%), Positives = 102/245 (41%), Gaps = 58/245 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--------RSIRKYRDAAMIEIDVLQH 118
            Y+++ ++G GT+G V +  D  T E VAIKV+          I++       EI +L+ 
Sbjct: 4   DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQ-------EISMLKE 56

Query: 119 LAKNDKGGSSHCVQIRNWFDY--RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFG 175
                     H   +  +  Y  R+ + IV E   G SL D  +  +  P     +    
Sbjct: 57  --------CRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQDIYQVTRG-PLSELQIAYVC 107

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           R+ L+ +AY+H+   IH D+K  NILL             +  G+           +KL 
Sbjct: 108 RETLKGLAYLHETGKIHRDIKGANILL-------------TEDGD-----------VKLA 143

Query: 236 DFG-STAFDN--QNHSSIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILVELCTGE-A 288
           DFG S           S + T ++ APEV       G+   CD+W++G   +EL   +  
Sbjct: 144 DFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPP 203

Query: 289 LFQTH 293
           +F  H
Sbjct: 204 MFDLH 208

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 86.0 bits (213), Expect = 6e-19
 Identities = 59/226 (26%), Positives = 100/226 (44%), Gaps = 35/226 (15%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDKGG 126
           + +S +G G  G V +     T   +A KVV   +    R   + E+ ++          
Sbjct: 8   ETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECR------ 61

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           S + V     F   N+IC+  E +     D + + K  P PV+++ +    ++E + Y++
Sbjct: 62  SPYIVSFYGAFLNENNICMCMEFMDCGSLDRIYK-KGGPIPVEILGKIAVAVVEGLTYLY 120

Query: 187 D-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDN 244
           +  R++H D+KP NIL+             +S G+           IKL DFG S    N
Sbjct: 121 NVHRIMHRDIKPSNILV-------------NSRGQ-----------IKLCDFGVSGELIN 156

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
               + V T  Y +PE I G  ++   D+WS+G  ++EL  G+  F
Sbjct: 157 SIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPF 202

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 85.3 bits (211), Expect = 7e-19
 Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 59/264 (22%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KYRDAAMIEIDVLQHLAKNDKGG 126
           +G G F    +  D +T   +A+K V  +R       +  +A   EI ++  L       
Sbjct: 8   LGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARL------N 61

Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
             H +++       +H  +  E + G S+   L   KY  F   ++  +  QLL  ++Y+
Sbjct: 62  HPHIIRMLGATCEDSHFNLFVEWMAGGSVSHLLS--KYGAFKEAVIINYTEQLLRGLSYL 119

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA---- 241
           H+ ++IH D+K  N+L+              S+G+           +++ DFG+ A    
Sbjct: 120 HENQIIHRDVKGANLLI-------------DSTGQR----------LRIADFGAAARLAA 156

Query: 242 -------FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
                  F  Q    ++ T  + APEV+ G  +   CD+WSVGC+++E+ T +  +   +
Sbjct: 157 KGTGAGEFQGQ----LLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEK 212

Query: 295 NLEHLAMMER---ALGP--LPEHM 313
           +  HLA++ +   A     +PEH+
Sbjct: 213 HSNHLALIFKIASATTAPSIPEHL 236

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 86.7 bits (214), Expect = 8e-19
 Identities = 70/228 (30%), Positives = 103/228 (45%), Gaps = 52/228 (22%)

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 162

Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   +
Sbjct: 163 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222

Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            ++    +   LG P PE M      +R       KY    + L +P             
Sbjct: 223 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 265

Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
           KL  D L    S H     S   DLL  +L  DP++R++  +AL HP+
Sbjct: 266 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQHPY 313

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 83.9 bits (207), Expect = 2e-18
 Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 33/269 (12%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +Y +L  +GEG+FGR L      + ++ A+K +R  +          + +  LAK     
Sbjct: 1   QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVL-LAKMKH-- 57

Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
             + V  +  F+   H+ IV E   G  L   +K  +   FP D + ++  Q+   V ++
Sbjct: 58  -PNIVAFKESFEADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHI 116

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
           H+ R++H D+K +NI L  +  +KL   G  R  +    + C                  
Sbjct: 117 HEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYAC------------------ 158

Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH--ENLEHLAM 301
                + V T +Y  PE+   + ++   D+WS+GCIL ELCT +  FQ +  +NL  L +
Sbjct: 159 -----TYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLI-LKV 212

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSR 330
            + +  PLP H         ++ F+R  R
Sbjct: 213 CQGSYKPLPSHYSYELRSLIKQMFKRNPR 241

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 82.8 bits (204), Expect = 5e-18
 Identities = 66/226 (29%), Positives = 102/226 (45%), Gaps = 45/226 (19%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVR------SIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           +G+G FGRV  C+D  T   +A+K V+         K  +A   EI +L++L        
Sbjct: 10  LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69

Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
             C++     D       +F +  P  S+ D LK   Y     ++ R++ RQ+LE V+Y+
Sbjct: 70  YGCLR-----DPMERTLSIFMEHMPGGSIKDQLK--SYGALTENVTRKYTRQILEGVSYL 122

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST----- 240
           H   ++H D+K  NIL             R S G            +KL DFG++     
Sbjct: 123 HSNMIVHRDIKGANIL-------------RDSVGN-----------VKLGDFGASKRLQT 158

Query: 241 -AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
                    S+  T ++ +PEVI G G+    D+WSVGC +VE+ T
Sbjct: 159 ICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 82.4 bits (204), Expect = 8e-18
 Identities = 75/341 (21%), Positives = 124/341 (36%), Gaps = 90/341 (26%)

Query: 68  YKILSKMGEGTFGRVL--ECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
           Y+++  +G G    V    C      E+VAIK +  + K +      +D L+   +    
Sbjct: 3   YELIEVIGVGATAVVYAAICLPNN--EKVAIKRI-DLEKCQ----TSVDELRKEVQA-MS 54

Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLK-RNKYCPFPVDLVREFGRQLLES 181
             +H   V+    F   + + +V   L G SL D +K           ++    +++L+ 
Sbjct: 55  QCNHPNVVKYYTSFVVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKG 114

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H    IH D+K  NILL                            ++K+ DFG +A
Sbjct: 115 LEYLHSNGQIHRDIKAGNILLGE------------------------DGSVKIADFGVSA 150

Query: 242 F-----DNQNHS--SIVSTRHYRAPEVI-LGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
                 D       + V T  + APEV+    G+ +  D+WS G   +EL TG A +  +
Sbjct: 151 SLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKY 210

Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
             ++ L +  +                           N P    +    K   K    +
Sbjct: 211 PPMKVLMLTLQ---------------------------NDPPSLETGADYKKYSKS--FR 241

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            M+SL                L+ DPS+R TA + L H FF
Sbjct: 242 KMISL---------------CLQKDPSKRPTAEELLKHKFF 267

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 82.8 bits (205), Expect = 1e-17
 Identities = 84/343 (24%), Positives = 135/343 (39%), Gaps = 93/343 (27%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           ++IL+++G+G +G+V     + T E VA+K +    + K  +   +  E D+L       
Sbjct: 3   FQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILT------ 56

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
              S   V++   F    ++ +  E +    F  L  N       D  R +  ++ E+V 
Sbjct: 57  TTKSEWLVKLLYAFQDDEYLYLAMEYVPGGDFRTLLNNLGV-LSEDHARFYMAEMFEAVD 115

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
            +H+L  IH DLKPEN L+              +SG            IKL DFG S   
Sbjct: 116 ALHELGYIHRDLKPENFLI-------------DASGH-----------IKLTDFGLSKGI 151

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF------QTHENL 296
               +S +V +  Y APEV+ G G+ +  D WS+GC+L E   G   F      +T ENL
Sbjct: 152 VTYANS-VVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENL 210

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           ++                                L  P     R ++             
Sbjct: 211 KYWKET----------------------------LQRPVYDDPRFNLS------------ 230

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQAL-NHPFFRNLN 398
               D A   +T L++     DPS R  + + + NHPFF+ ++
Sbjct: 231 ----DEAWDLITKLIN-----DPSRRFGSLEDIKNHPFFKEVD 264

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 81.0 bits (200), Expect = 2e-17
 Identities = 61/273 (22%), Positives = 123/273 (45%), Gaps = 40/273 (14%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK---VVRSIRKYRDAAMIEIDVLQHLAKND 123
           +Y  + K+GEG+FG+ +    ++  ++  IK   + +   K R+ +  E+ VL ++    
Sbjct: 1   KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKH-- 58

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                + VQ +  F+   ++ IV +   G  L+  +   +   FP D + ++  Q+  ++
Sbjct: 59  ----PNIVQYQESFEENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLAL 114

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++HD +++H D+K +NI L                         K   IKL DFG    
Sbjct: 115 KHVHDRKILHRDIKSQNIFLT------------------------KDGTIKLGDFGIARV 150

Query: 243 DNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
            N       + + T +Y +PE+     ++   D+W++GC+L E+CT +  F+   N+++L
Sbjct: 151 LNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAG-NMKNL 209

Query: 300 AM--MERALGPLPEHMIRRASRGTEKYFRRGSR 330
            +  +  +  P+  H          + F+R  R
Sbjct: 210 VLKIIRGSYPPVSSHYSYDLRNLVSQLFKRNPR 242

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 80.7 bits (199), Expect = 3e-17
 Identities = 73/264 (27%), Positives = 119/264 (45%), Gaps = 35/264 (13%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVR-----SIRKYRDAAMI-----EIDVLQHLAKND 123
           +G G+FG V    +  + E +A+K V      +  K R  +M+     EI +L+ L    
Sbjct: 8   IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQH-- 65

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                + VQ        +H+ I  E + G S+   L  N Y  F   LVR F RQ+L+ +
Sbjct: 66  ----ENIVQYLGSSLDADHLNIFLEYVPGGSVAALL--NNYGAFEETLVRNFVRQILKGL 119

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            Y+H+  +IH D+K  NIL+ +   IK+  +  S   E               +  ST  
Sbjct: 120 NYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEA--------------NSLSTK- 164

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
            N    S+  +  + APEV+    ++   D+WS+GC++VE+ TG+  F     L+ +  +
Sbjct: 165 TNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKI 224

Query: 303 -ERALGPLPEHMIRRASRGTEKYF 325
            E A   +P ++   A    EK F
Sbjct: 225 GENASPEIPSNISSEAIDFLEKTF 248

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 80.6 bits (199), Expect = 3e-17
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 59/269 (21%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVR-----------SIRKYRDAAMIEIDVLQHLAKN 122
           +G+GT+GRV    +  T E +A+K V              +    A   EI+ L+ L   
Sbjct: 9   IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDH- 67

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                 + VQ   +     ++ I  E + G S+   L+   Y  F   LVR F  Q+LE 
Sbjct: 68  -----LNIVQYLGFETTEEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLEG 120

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST- 240
           +AY+H   ++H DLK +N+L+                              K+ DFG + 
Sbjct: 121 LAYLHSKGILHRDLKADNLLV------------------------DADGICKISDFGISK 156

Query: 241 ----AFDNQNHSSIVSTRHYRAPEVI--LGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
                +DN  + S+  +  + APEVI     G+S   D+WS+GC+++E+  G    +   
Sbjct: 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR---RPWS 213

Query: 295 NLEHLAMM-----ERALGPLPEHMIRRAS 318
           + E +A M     +R+  P+P  +    S
Sbjct: 214 DEEAIAAMFKLGNKRSAPPIPPDVSMNLS 242

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 80.4 bits (198), Expect = 4e-17
 Identities = 64/226 (28%), Positives = 108/226 (47%), Gaps = 41/226 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKG 125
           ++I+ ++G+G FG+V +  +++T    A KV+  +S  +  D  M+EID+L   A  D  
Sbjct: 7   WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDY-MVEIDIL---ASCDH- 61

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
              + V++ + F Y N++ I+ E       D +      P     +R   +Q LE++ Y+
Sbjct: 62  --PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYL 119

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN- 244
           H+ ++IH DLK  NIL        L G                   IKL DFG +A +  
Sbjct: 120 HENKIIHRDLKAGNILFT------LDG------------------DIKLADFGVSAKNTR 155

Query: 245 --QNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVEL 283
             Q   S + T ++ APEV++        + Y  D+WS+G  L+E+
Sbjct: 156 TIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM 201

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score = 80.3 bits (199), Expect = 5e-17
 Identities = 74/343 (21%), Positives = 136/343 (39%), Gaps = 96/343 (27%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--- 124
           ++ +  +G G+FGRV+    + + +  A+K++        A ++++  ++H+  N+K   
Sbjct: 3   FEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSK------AKIVKLKQVEHV-LNEKRIL 55

Query: 125 GGSSH--CVQIRNWF-DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
               H   V +   F D  N + +V E + G  LF  L+++    FP  + R +  Q++ 
Sbjct: 56  QSIRHPFLVNLYGSFQDDSN-LYLVMEYVPGGELFSHLRKSGR--FPEPVARFYAAQVVL 112

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           ++ Y+H L +++ DLKPEN+LL S       GY                  IK+ DFG  
Sbjct: 113 ALEYLHSLDIVYRDLKPENLLLDSD------GY------------------IKITDFGFA 148

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                   ++  T  Y APE+IL  G+    D W++G ++ E+  G   F        + 
Sbjct: 149 KRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDD---NPIQ 205

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
           + E+ L                       ++ +P                          
Sbjct: 206 IYEKIL---------------------EGKVRFPS-----------------------FF 221

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQA-----LNHPFFRNLN 398
                   DL+  LL+ D ++RL   +       NHP+F  ++
Sbjct: 222 S---PDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID 261

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 80.0 bits (197), Expect = 6e-17
 Identities = 78/338 (23%), Positives = 126/338 (37%), Gaps = 99/338 (29%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA-------MIEIDVLQHLA-KNDKG 125
           +G+G +G V  C      + +A+K V        AA         E+D+L+ L   N   
Sbjct: 8   LGKGAYGTVY-CGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               C+         N I I  E + G S+   L R  + P P  +  ++ +Q+L+ VAY
Sbjct: 67  YLGTCLD-------DNTISIFMEFVPGGSISSILNR--FGPLPEPVFCKYTKQILDGVAY 117

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST---- 240
           +H+  ++H D+K  N++L                  MP      +  IKLIDFG      
Sbjct: 118 LHNNCVVHRDIKGNNVML------------------MP------NGIIKLIDFGCARRLA 153

Query: 241 -AFDNQNHSSIVSTRH----YRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
               +  HS+++ + H    + APEVI   G+    D+WS+GC + E+ TG+    + + 
Sbjct: 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDR 213

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           L  +  +    G +P                                     +L      
Sbjct: 214 LAAMFYIGAHRGLMP-------------------------------------RLP----- 231

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                D   +   D +   L  D  ER +A Q L H F
Sbjct: 232 -----DSFSAAAIDFVTSCLTRDQHERPSALQLLRHDF 264

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 78.8 bits (195), Expect = 1e-16
 Identities = 57/248 (22%), Positives = 103/248 (41%), Gaps = 50/248 (20%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSI-RKYRDAAMIEIDVLQHLAKNDK 124
           Y++L  +G+G+FG V +   +   + +  K +   ++  K +   + E+++L+ L K+  
Sbjct: 2   YEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILREL-KHP- 59

Query: 125 GGSSHCVQIRNWF-DYRNH-ICIVFE-----KLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
               + V+  +   D  N  + IV E      L   +    K  KY     + +     Q
Sbjct: 60  ----NIVRYYDRIIDRSNQTLYIVMEYCEGGDLAQLIQKCKKERKY--IEEEFIWRILTQ 113

Query: 178 LLESVAYMHDL-----RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
           LL ++   H+       ++H DLKP NI L ++  +KL        G             
Sbjct: 114 LLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKL--------G------------- 152

Query: 233 KLIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
              DFG       D+    + V T +Y +PE +  + +    D+WS+GC++ ELC     
Sbjct: 153 ---DFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPP 209

Query: 290 FQTHENLE 297
           F     L+
Sbjct: 210 FTARNQLQ 217

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 78.0 bits (192), Expect = 2e-16
 Identities = 63/256 (24%), Positives = 111/256 (43%), Gaps = 42/256 (16%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
           +Y+ +  +G G FG V  C  +  Q+ V IK +   +  +  R AA  E  VL+ L    
Sbjct: 1   KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLL---- 56

Query: 124 KGGSSHCVQIRNW--FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
               SH   I  +  F     + IV E   G +L +++++        D +  F  Q+L 
Sbjct: 57  ----SHPNIIEYYENFLEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILL 112

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           ++ ++H   ++H DLK +NILL   + +                       +K+ DFG +
Sbjct: 113 ALHHVHTKLILHRDLKTQNILLDKHKMV-----------------------VKIGDFGIS 149

Query: 241 AF--DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
                     ++V T  Y +PE+  G  ++   D+W++GC+L EL + +  F+   NL  
Sbjct: 150 KILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEA-ANLPA 208

Query: 299 LAM--MERALGPLPEH 312
           L +  M     P+ + 
Sbjct: 209 LVLKIMSGTFAPISDR 224

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 77.8 bits (191), Expect = 3e-16
 Identities = 73/261 (27%), Positives = 116/261 (44%), Gaps = 49/261 (18%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVR------SIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           +G+G FGRV  C+D  T   +A K V+         K   A   EI +L++L        
Sbjct: 10  LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69

Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
             C++ R        + I  E + G S+ D LK   Y      + R++ RQ+LE ++Y+H
Sbjct: 70  YGCLRDRA----EKTLTIFMEYMPGGSVKDQLK--AYGALTESVTRKYTRQILEGMSYLH 123

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST------ 240
              ++H D+K  NIL             R S+G            +KL DFG++      
Sbjct: 124 SNMIVHRDIKGANIL-------------RDSAGN-----------VKLGDFGASKRLQTI 159

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                   S+  T ++ +PEVI G G+    D+WS+GC +VE+ T +  +  +E +   A
Sbjct: 160 CMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA--A 217

Query: 301 MMERALGP----LPEHMIRRA 317
           + + A  P    LP H+   A
Sbjct: 218 IFKIATQPTNPQLPSHISEHA 238

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 77.1 bits (190), Expect = 5e-16
 Identities = 60/228 (26%), Positives = 99/228 (43%), Gaps = 44/228 (19%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKND 123
           +KI  K+G+G F  V +         VA+K V+       K R   + EID+L+ L    
Sbjct: 4   FKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQL---- 59

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFE-----KLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                + ++    F   N + IV E      L   +  F K+ +    P   + ++  QL
Sbjct: 60  --DHPNVIKYLASFIENNELNIVLELADAGDLSRMIKHFKKQKR--LIPERTIWKYFVQL 115

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
             ++ +MH  R++H D+KP N+      FI   G                   +KL D G
Sbjct: 116 CSALEHMHSKRIMHRDIKPANV------FITATG------------------VVKLGDLG 151

Query: 239 STAFDNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
              F +   +   S+V T +Y +PE I   G+++  D+WS+GC+L E+
Sbjct: 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 199

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 76.3 bits (188), Expect = 1e-15
 Identities = 61/229 (26%), Positives = 94/229 (41%), Gaps = 54/229 (23%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           LS++GEG  G V +C  + T    A+K + +         ++  +L+ L  N    S + 
Sbjct: 6   LSRLGEGAGGSVTKCRLKNTGMIFALKTITT----DPNPDLQKQILRELEINKSCKSPYI 61

Query: 131 VQIRNWF--DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA---- 183
           V+    F  +  + I I  E   G SL    K+          V++ G ++ E V     
Sbjct: 62  VKYYGAFLDESSSSIGIAMEYCEGGSLDSIYKK----------VKKRGGRIGEKVLGKIA 111

Query: 184 --------YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
                   Y+H  ++IH D+KP NILL             +  G+           +KL 
Sbjct: 112 ESVLKGLSYLHSRKIIHRDIKPSNILL-------------TRKGQ-----------VKLC 147

Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
           DFG S    N    +   T  Y APE I G  +S   D+WS+G  L+E+
Sbjct: 148 DFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV 196

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 75.4 bits (185), Expect = 2e-15
 Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 33/220 (15%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV------RSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           +G G FG V  C+D  T   +A+K V      +   K  +A   EI +L++L  +     
Sbjct: 10  LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQY 69

Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
             C++     D       +F +  P  S+ D LK   Y     ++ R + RQ+L+ V+Y+
Sbjct: 70  YGCLR-----DPEEKKLSIFVEYMPGGSIKDQLK--AYGALTENVTRRYTRQILQGVSYL 122

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H   ++H D+K  NIL             R S+G +       S  I+ I    T     
Sbjct: 123 HSNMIVHRDIKGANIL-------------RDSAGNVKLGDFGASKRIQTICMSGTGI--- 166

Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
              S+  T ++ +PEVI G G+    D+WSV C +VE+ T
Sbjct: 167 --KSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLT 204

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 75.8 bits (187), Expect = 2e-15
 Identities = 82/357 (22%), Positives = 131/357 (36%), Gaps = 87/357 (24%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSI--RKYRDAAMIEIDVLQHLAKN 122
            +K +  +G+G  GRV     + T +  A+KV+  + +  R      + E ++L  L   
Sbjct: 2   HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATL--- 58

Query: 123 DKGGSSH--CVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                 H     +   F    ++C+V +   G  LF  L+R        ++ R +  ++L
Sbjct: 59  -----DHPFLPTLYASFQTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVL 113

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKL------------PGYKRSSSGEMPFRCLP 227
            ++ Y+H L +++ DLKPENILL  S  I L            P     +  +   R   
Sbjct: 114 LALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSV 173

Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
            S   +      +   N    S V T  Y APEVI G G     D W++G +L E+  G 
Sbjct: 174 NSIPSETFSEEPSFRSN----SFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGT 229

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR--GSRLNWPEGAVSRESIKA 345
             F                               ++ F       + +P           
Sbjct: 230 TPF--------------------------KGSNRDETFSNILKKEVTFPG---------- 253

Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN----HPFFRNLN 398
                     VS       S+  DL+  LL  DPS+RL +++       HPFFR +N
Sbjct: 254 -------SPPVS-------SSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN 296

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 76.0 bits (187), Expect = 2e-15
 Identities = 83/342 (24%), Positives = 131/342 (38%), Gaps = 103/342 (30%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDA-AMIEIDVLQHLAKNDKGGSSH 129
           +G+GTFG+V+   ++ T +  A+K+++    I K   A  + E  VLQ+        + H
Sbjct: 3   LGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQN--------TRH 54

Query: 130 --CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
                ++  F   + +C V E   G  LF  L R +   F  D  R +G +++ ++ Y+H
Sbjct: 55  PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALGYLH 112

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFD 243
              +++ DLK EN++                        L K   IK+ DFG       D
Sbjct: 113 SCDVVYRDLKLENLM------------------------LDKDGHIKITDFGLCKEGISD 148

Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLEHLAM 301
                +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +
Sbjct: 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 208

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           ME    P      R  S                                           
Sbjct: 209 MEEIRFP------RTLS------------------------------------------P 220

Query: 362 RARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
            A+S    LL GLL+ DP +RL      A++ + H FF ++N
Sbjct: 221 EAKS----LLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASIN 258

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 75.8 bits (186), Expect = 3e-15
 Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 42/237 (17%)

Query: 68  YKILSKMGEGTFGRV-LECWDRQTQERVAIK------VVRSIRKYRDAAMIEIDVLQHLA 120
           +  +  +G G+FGRV L  +  +    VAIK      +++  +K  D    E  +L ++ 
Sbjct: 32  FNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIK--QKQVDHVFSERKILNYI- 88

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                    CV +   F   +++ +V E  +G   F FL+RNK   FP D+   +  Q++
Sbjct: 89  -----NHPFCVNLYGSFKDESYLYLVLEFVIGGEFFTFLRRNKR--FPNDVGCFYAAQIV 141

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
               Y+  L +++ DLKPEN+LL    FIK+                         DFG 
Sbjct: 142 LIFEYLQSLNIVYRDLKPENLLLDKDGFIKM------------------------TDFGF 177

Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
               +    ++  T  Y APE++L +G     D W++G  + E+  G   F  +E L
Sbjct: 178 AKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL 234

Length = 340

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 74.8 bits (184), Expect = 3e-15
 Identities = 60/226 (26%), Positives = 99/226 (43%), Gaps = 37/226 (16%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKND 123
            Y  +  +G+G FG        +    V  K V   R   K R  A+ EI +L  L   +
Sbjct: 1   HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPN 60

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                  +   N F   N + I  E   G +L+D + R K   F  ++V  +  Q++ +V
Sbjct: 61  ------IIAYYNHFMDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAV 114

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
           +Y+H   ++H D+K  NI L                         K+  IKL DFG +  
Sbjct: 115 SYIHKAGILHRDIKTLNIFLT------------------------KAGLIKLGDFGISKI 150

Query: 243 DNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
               +S   ++V T +Y +PE+  G+ +++  D+W++GC+L EL T
Sbjct: 151 LGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLT 196

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score = 74.8 bits (184), Expect = 4e-15
 Identities = 62/241 (25%), Positives = 103/241 (42%), Gaps = 51/241 (21%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHL 119
            N    ++I+ ++G+G FG+V +   ++T    A K++   S  +  D  M+EID+L   
Sbjct: 1   VNPNDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDF-MVEIDIL--- 56

Query: 120 AKNDKGGSSHC-----VQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
                   S C     V +   + Y N + I+ E       D +            +R  
Sbjct: 57  --------SECKHPNIVGLYEAYFYENKLWILIEFCDGGALDSIMLELERGLTEPQIRYV 108

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
            RQ+LE++ ++H  ++IH DLK  NILL             +  G+           +KL
Sbjct: 109 CRQMLEALNFLHSHKVIHRDLKAGNILL-------------TLDGD-----------VKL 144

Query: 235 IDFGSTAF---DNQNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTG 286
            DFG +A      Q   + + T ++ APEV+         + Y  D+WS+G  L+EL   
Sbjct: 145 ADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQM 204

Query: 287 E 287
           E
Sbjct: 205 E 205

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 75.1 bits (184), Expect = 5e-15
 Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 64/348 (18%)

Query: 73  KMGEGTFGRVLECW--DRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKNDKGG 126
           K+G GT+G V +    D + ++  A+K +     S+   R+ A++      ++    K  
Sbjct: 8   KVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVF 67

Query: 127 SSHCVQIRNW--FDYRNHI---CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
            SH  + + W  FDY  H     I F +   +        K    P  +V+    Q+L+ 
Sbjct: 68  LSHSDR-KVWLLFDYAEHDLWHIIKFHRASKA------NKKPMQLPRSMVKSLLYQILDG 120

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H   ++H DLKP NIL++       P   R    +M F  L  S    L D     
Sbjct: 121 IHYLHANWVLHRDLKPANILVMGEG----PERGRVKIADMGFARLFNSPLKPLADL---- 172

Query: 242 FDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHE------ 294
                   +V T  YRAPE++LG   ++   D+W++GCI  EL T E +F   +      
Sbjct: 173 ------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTS 226

Query: 295 NLEHLAMMERALGPL--PEHM----IRRASR--GTEKYFRRGSRLNWPEGAVSRESIKAV 346
           N  H   ++R    +  P       IR+       +K FRR +  N          IK +
Sbjct: 227 NPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYAN-------SSLIKYM 279

Query: 347 KKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           +K          H  +  S +  LL  LL  DP++R+T+ QAL  P+F
Sbjct: 280 EK----------HKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 75.0 bits (184), Expect = 5e-15
 Identities = 86/335 (25%), Positives = 132/335 (39%), Gaps = 91/335 (27%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC--- 130
           +G+G+FG+V++   R TQ   A+K   +IRK    +  E+     LA+       +C   
Sbjct: 1   IGKGSFGKVMQVRKRDTQRIYALK---TIRKAHIVSRSEVT--HTLAERTVLAQVNCPFI 55

Query: 131 VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR 189
           V ++  F     + +V   + G  LF  L+R     F +   R +  +LL ++  +H   
Sbjct: 56  VPLKFSFQSPEKLYLVLAFINGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKFN 113

Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQN 246
           +I+ DLKPENILL                             I L DFG       D+  
Sbjct: 114 VIYRDLKPENILL------------------------DYQGHIALCDFGLCKLNMKDDDK 149

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL 306
            ++   T  Y APE++LG G++   D W++G +L E+ TG   F      E++  M R +
Sbjct: 150 TNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYD----ENVNEMYRKI 205

Query: 307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST 366
              P                    L +P+G                              
Sbjct: 206 LQEP--------------------LRFPDG--------------------------FDRD 219

Query: 367 LTDLLHGLLRYDPSERL---TARQALNHPFFRNLN 398
             DLL GLL  DP+ RL    A++  NHPFF  L+
Sbjct: 220 AKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLS 254

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 73.7 bits (181), Expect = 6e-15
 Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 31/227 (13%)

Query: 68  YKILSKMGEGTFGRVLECW---DRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK 124
           ++IL+K+G+G+FG V +     D++      I + +  R+ R+ A+ E  VL  L     
Sbjct: 2   FEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKL----- 56

Query: 125 GGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
             SS+ ++    F  +  + IV E      L   LK  +  P P D V  F  Q+L  +A
Sbjct: 57  -DSSYIIRYYESFLDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLA 115

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
           ++H  +++H D+K  N+ L + + +K+        G++          +  +   +T F 
Sbjct: 116 HLHSKKILHRDIKSLNLFLDAYDNVKI--------GDL---------GVAKLLSDNTNFA 158

Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           N    +IV T +Y +PE+     ++   D+W++G +L E CTG+  F
Sbjct: 159 N----TIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPF 201

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 76.3 bits (187), Expect = 6e-15
 Identities = 76/267 (28%), Positives = 130/267 (48%), Gaps = 27/267 (10%)

Query: 58  FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAM-IEID 114
           ++ GE+    Y+++ K+G G FG V     ++TQE    K +  R +++   + + IE++
Sbjct: 5   YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVN 64

Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNK-YCPFPVDLVRE 173
           V++ L    K    +  +  N  + + +I + F   G    +  K  K +       + +
Sbjct: 65  VMREL--KHKNIVRYIDRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVD 122

Query: 174 FGRQLLESVAYMHDL-------RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL 226
             RQLL ++AY H+L       R++H DLKP+NI L  S  I+  G   + +  +  R +
Sbjct: 123 ITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL--STGIRHIGKITAQANNLNGRPI 180

Query: 227 PKSSAIKLIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSY--PCDMWSVGCILV 281
            K     + DFG   +   ++  HS  V T +Y +PE++L    SY    DMW++GCI+ 
Sbjct: 181 AK-----IGDFGLSKNIGIESMAHSC-VGTPYYWSPELLLHETKSYDDKSDMWALGCIIY 234

Query: 282 ELCTGEALFQTHENLEHLAMMERALGP 308
           ELC+G+  F    N   L + E   GP
Sbjct: 235 ELCSGKTPFHKANNFSQL-ISELKRGP 260

Length = 1021

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 73.0 bits (179), Expect = 1e-14
 Identities = 68/261 (26%), Positives = 104/261 (39%), Gaps = 50/261 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR------KYRDAAMIEIDVLQHLA 120
           RY +  ++G+G+FG V    D++      +KV++ I            A  E  +L  L 
Sbjct: 1   RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKL- 59

Query: 121 KNDKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDF----LKRNKYCPFPVDLVREF 174
                   H   V+    F  R+  CI+ E       D     LK         + V E+
Sbjct: 60  -------DHPAIVKFHASFLERDAFCIITEYCEGRDLDCKLEELKHTGK-TLSENQVCEW 111

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             QLL  V YMH  R++H DLK +NI L                         K++ +K+
Sbjct: 112 FIQLLLGVHYMHQRRILHRDLKAKNIFL-------------------------KNNLLKI 146

Query: 235 IDFGSTAF---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
            DFG +          ++   T +Y +PE +   G+    D+WS+GCIL E+C     F+
Sbjct: 147 GDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFE 206

Query: 292 THENLE-HLAMMERALGPLPE 311
               L   L ++E     LPE
Sbjct: 207 GQNFLSVVLRIVEGPTPSLPE 227

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 73.6 bits (180), Expect = 1e-14
 Identities = 67/250 (26%), Positives = 103/250 (41%), Gaps = 58/250 (23%)

Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
            P  +V+    Q+L+ + Y+H   ++H DLKP NIL++       P   R    +M F  
Sbjct: 105 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG----PERGRVKIADMGFAR 160

Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELC 284
           L  S    L D             +V T  YRAPE++LG   ++   D+W++GCI  EL 
Sbjct: 161 LFNSPLKPLADL----------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 210

Query: 285 TGEALFQTHE------NLEHLAMMERA--------------LGPLPEHMIRRASRGTEKY 324
           T E +F   +      N  H   ++R               +  +PEH          K 
Sbjct: 211 TSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHST------LMKD 264

Query: 325 FRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
           FRR +  N             +K +++       H  +  S    LL  LL  DP +R+T
Sbjct: 265 FRRNTYTN----------CSLIKYMEK-------HKVKPDSKAFHLLQKLLTMDPIKRIT 307

Query: 385 ARQALNHPFF 394
           + QA+  P+F
Sbjct: 308 SEQAMQDPYF 317

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 72.7 bits (178), Expect = 1e-14
 Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 37/242 (15%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
           RY+I+ K+GEG+FG++     +   E   IK +   +   K ++A+  E+ +L  +    
Sbjct: 1   RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKH-- 58

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                + V     F     + IV E   G  L   + R +   F  D +  +  Q+   +
Sbjct: 59  ----PNIVTFFASFQENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGL 114

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++HD +++H D+K +NI L             S +G +           KL DFG    
Sbjct: 115 KHIHDRKILHRDIKSQNIFL-------------SKNGMVA----------KLGDFGIARQ 151

Query: 243 DNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
            N +     + V T +Y +PE+     ++   D+WS+GC+L ELCT +  F+ + NL  L
Sbjct: 152 LNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGN-NLHQL 210

Query: 300 AM 301
            +
Sbjct: 211 VL 212

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 73.4 bits (180), Expect = 2e-14
 Identities = 71/347 (20%), Positives = 129/347 (37%), Gaps = 74/347 (21%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           Y ++  +  G+ GRV         + V +K+ +     +   +IE  +LQ++        
Sbjct: 68  YTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQ-----KGTTLIEAMLLQNV-------- 114

Query: 128 SH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
           +H   +++++        C+V       L+ +L +    P P+D      +Q+LE + Y+
Sbjct: 115 NHPSVIRMKDTLVSGAITCMVLPHYSSDLYTYLTKRSR-PLPIDQALIIEKQILEGLRYL 173

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD-- 243
           H  R+IH D+K ENI +                             + + D G+  F   
Sbjct: 174 HAQRIIHRDVKTENIFIND------------------------VDQVCIGDLGAAQFPVV 209

Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL------------CTGEALFQ 291
                 +  T    APEV+    ++   D+WS G +L E+             T E   +
Sbjct: 210 APAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVK 269

Query: 292 THENLEHLAMMERALGPLPEHMIRR-ASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD 350
           +  +  HL  +   L   PE   R   SR    +    S    P            ++++
Sbjct: 270 SCHS--HLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPC-----FQRVN 322

Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                  L +D        L+H +L +D + R +A + LN+P F  L
Sbjct: 323 -------LPIDGEF-----LVHKMLTFDAAMRPSAEEILNYPMFAQL 357

Length = 357

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 72.9 bits (179), Expect = 2e-14
 Identities = 85/338 (25%), Positives = 135/338 (39%), Gaps = 95/338 (28%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAA--MIEIDVLQHLAKNDKGGSSH 129
           +G+G+FG+VL    +   +  A+KV+  ++I K ++    M E +VL    KN K     
Sbjct: 3   IGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVL---LKNVK--HPF 57

Query: 130 CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V +   F   + +  V + + G  LF  L+R +   FP    R +  ++  ++ Y+H L
Sbjct: 58  LVGLHYSFQTADKLYFVLDYVNGGELFFHLQRERS--FPEPRARFYAAEIASALGYLHSL 115

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD---NQ 245
            +I+ DLKPENILL S       G+                  + L DFG        ++
Sbjct: 116 NIIYRDLKPENILLDSQ------GH------------------VVLTDFGLCKEGIEHSK 151

Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
             S+   T  Y APEV+    +    D W +G +L E+  G   F + +  E   M +  
Sbjct: 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAE---MYDNI 208

Query: 306 LG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR 364
           L  PL                                         RLK  +S+      
Sbjct: 209 LNKPL-----------------------------------------RLKPNISV------ 221

Query: 365 STLTDLLHGLLRYDPSERLTARQAL----NHPFFRNLN 398
            +   LL GLL+ D ++RL A+       NH FF ++N
Sbjct: 222 -SARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSIN 258

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 72.4 bits (177), Expect = 3e-14
 Identities = 58/227 (25%), Positives = 110/227 (48%), Gaps = 43/227 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-DAAMIEIDVLQHLAKNDKGG 126
           ++I+ ++G+G FG+V +  +++T    A KV+ +  +   +  M+EI++L   A  +   
Sbjct: 14  WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEIL---ATCNH-- 68

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFD--FLKRNKYCPFPVDLVREFGRQLLESVAY 184
             + V++   F +   + I+ E       D   L+ ++    P   ++   RQ+LE++ Y
Sbjct: 69  -PYIVKLLGAFYWDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ--IQVICRQMLEALQY 125

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H +++IH DLK  N+LL             +  G+           IKL DFG +A + 
Sbjct: 126 LHSMKIIHRDLKAGNVLL-------------TLDGD-----------IKLADFGVSAKNV 161

Query: 245 ---QNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVEL 283
              Q   S + T ++ APEV++        + Y  D+WS+G  L+E+
Sbjct: 162 KTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEM 208

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 71.6 bits (176), Expect = 4e-14
 Identities = 73/341 (21%), Positives = 125/341 (36%), Gaps = 98/341 (28%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMI-EIDVLQHLAKND 123
           +++L  +G+G FG+V     R T++  A+K +     + K     ++ E  +LQ L    
Sbjct: 2   FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQEL---- 57

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
               +H   V +   F    ++ +V +  LG  L   L +     F  + V+ +  +++ 
Sbjct: 58  ----NHPFLVNLWYSFQDEENMYLVVDLLLGGDLRYHLSQKV--KFSEEQVKFWICEIVL 111

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
           ++ Y+H   +IH D+KP+NILL         G+                  + + DF  +
Sbjct: 112 ALEYLHSKGIIHRDIKPDNILLDEQ------GH------------------VHITDFNIA 147

Query: 240 TAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL-- 296
           T    +   +S   T  Y APEV+   G+S   D WS+G    E   G+  ++ H     
Sbjct: 148 TKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIR 207

Query: 297 -EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
            +  A  E A    P                      W   A+                 
Sbjct: 208 DQIRAKQETADVLYPAT--------------------WSTEAI----------------- 230

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERL--TARQALNHPFF 394
                        D ++ LL  DP +RL    +   NHP+F
Sbjct: 231 -------------DAINKLLERDPQKRLGDNLKDLKNHPYF 258

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 71.0 bits (174), Expect = 6e-14
 Identities = 76/338 (22%), Positives = 126/338 (37%), Gaps = 90/338 (26%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS----IRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G FG V  C  + T +  A K +       RK    A+ E  +L+      K  S  
Sbjct: 1   LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILE------KVSSRF 54

Query: 130 CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP-FPVDLVREFGRQLLESVAYMHDL 188
            V +   F+ ++ +C+V   +      +   N   P FP      +  Q++  + ++H  
Sbjct: 55  IVSLAYAFETKDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR 114

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSG---EMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           R+++ DLKPEN+LL     +++     S  G   E+      K  A              
Sbjct: 115 RIVYRDLKPENVLLDDHGNVRI-----SDLGLAVELKGGKKIKGRA-------------- 155

Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
                  T  Y APEV+ G  + +  D +++GC L E+  G + F+  +           
Sbjct: 156 ------GTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRK----------- 198

Query: 306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS 365
                           EK              V +E +K      R   M   + D+   
Sbjct: 199 ----------------EK--------------VEKEELK-----RRTLEMAVEYPDKFSP 223

Query: 366 TLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
              DL   LL+ DP +RL     +A +   HP F++LN
Sbjct: 224 EAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 71.2 bits (175), Expect = 7e-14
 Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 68/258 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
            ++++  +GEGT+G+V +   ++T + VAIK++  I    +    E ++L+         
Sbjct: 7   IFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKY------- 59

Query: 127 SSHCVQIRNWFDY------RNHIC------IVFEKL-GPSLFDFLKRNKYC--PFPVDLV 171
           S+H     N   +      +N         +V E   G S+ D +K  +        + +
Sbjct: 60  SNH----PNIATFYGAFIKKNPPGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWI 115

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
               R+ L  +AY+H+ ++IH D+K +NILL             + + E           
Sbjct: 116 AYILRETLRGLAYLHENKVIHRDIKGQNILL-------------TKNAE----------- 151

Query: 232 IKLIDFG-STAFDNQNH--SSIVSTRHYRAPEVIL---GLGWSYP--CDMWSVGCILVEL 283
           +KL+DFG S   D+     ++ + T ++ APEVI        SY    D+WS+G   +EL
Sbjct: 152 VKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIEL 211

Query: 284 CTGE----------ALFQ 291
             G+          ALF+
Sbjct: 212 ADGKPPLCDMHPMRALFK 229

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 70.8 bits (173), Expect = 8e-14
 Identities = 64/221 (28%), Positives = 101/221 (45%), Gaps = 35/221 (15%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           L ++G+G+FG V +  D +T+E VAIK++  + +  D   IE D+ Q +    +  S + 
Sbjct: 9   LERIGKGSFGEVYKGIDNRTKEVVAIKII-DLEEAEDE--IE-DIQQEITVLSQCDSPYI 64

Query: 131 VQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR 189
            +    +     + I+ E LG  S  D LK     P     +    R++L+ + Y+H  R
Sbjct: 65  TRYYGSYLKGTKLWIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSER 121

Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQ-N 246
            IH D+K  N+LL             S  G+           +KL DFG      D Q  
Sbjct: 122 KIHRDIKAANVLL-------------SEQGD-----------VKLADFGVAGQLTDTQIK 157

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
            ++ V T  + APEVI    + +  D+WS+G   +EL  GE
Sbjct: 158 RNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 70.9 bits (173), Expect = 9e-14
 Identities = 66/223 (29%), Positives = 103/223 (46%), Gaps = 39/223 (17%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           L K+G+G+FG V +  D +TQ+ VAIK++  + +  D   IE D+ Q +    +  S + 
Sbjct: 9   LEKIGKGSFGEVFKGIDNRTQKVVAIKII-DLEEAEDE--IE-DIQQEITVLSQCDSPYV 64

Query: 131 VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYMHD 187
            +    +     + I+ E L G S  D L+     P P+D   +    R++L+ + Y+H 
Sbjct: 65  TKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYLHS 119

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQ 245
            + IH D+K  N+LL             S  GE           +KL DFG      D Q
Sbjct: 120 EKKIHRDIKAANVLL-------------SEHGE-----------VKLADFGVAGQLTDTQ 155

Query: 246 -NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
              ++ V T  + APEVI    +    D+WS+G   +EL  GE
Sbjct: 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 71.6 bits (176), Expect = 9e-14
 Identities = 65/235 (27%), Positives = 104/235 (44%), Gaps = 32/235 (13%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKNDKGGSSHC--- 130
           G G FG V     + T    A+K      K R + M+E + + H+ A+ D    +     
Sbjct: 10  GRGAFGEVRLVQKKDTGHIYAMK------KLRKSEMLEKEQVAHVRAERDILAEADNPWV 63

Query: 131 VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR 189
           V++   F   N++ ++ E L G  +   L   K   F  +  R +  + + ++  +H L 
Sbjct: 64  VKLYYSFQDENYLYLIMEYLPGGDMMTLLM--KKDTFTEEETRFYIAETILAIDSIHKLG 121

Query: 190 LIHTDLKPENILLVSSEFIKLP------GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
            IH D+KP+N+LL +   IKL       G K+S   E  +R L  +     +DF S    
Sbjct: 122 YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEF-YRILSHALPSNFLDFISKPMS 180

Query: 244 N--QNHS----------SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           +  +  +          S V T  Y APEV L  G++  CD WS+G I+ E+  G
Sbjct: 181 SKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 70.5 bits (172), Expect = 1e-13
 Identities = 62/221 (28%), Positives = 101/221 (45%), Gaps = 35/221 (15%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           L ++G+G+FG V +  D +TQ+ VAIK++  + +  D   IE D+ Q +    +  S + 
Sbjct: 9   LERIGKGSFGEVFKGIDNRTQQVVAIKII-DLEEAEDE--IE-DIQQEITVLSQCDSPYV 64

Query: 131 VQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR 189
            +    +     + I+ E LG  S  D L+     PF    +    +++L+ + Y+H  +
Sbjct: 65  TKYYGSYLKGTKLWIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEK 121

Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQ-N 246
            IH D+K  N+LL             S  G+           +KL DFG      D Q  
Sbjct: 122 KIHRDIKAANVLL-------------SEQGD-----------VKLADFGVAGQLTDTQIK 157

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
            ++ V T  + APEVI    +    D+WS+G   +EL  GE
Sbjct: 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 198

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 70.6 bits (173), Expect = 1e-13
 Identities = 82/343 (23%), Positives = 123/343 (35%), Gaps = 108/343 (31%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS---IR-KYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G G+FGRV     + T E  AIK ++    ++ K       E  +L  L        SH
Sbjct: 26  LGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMEL--------SH 77

Query: 130 --CVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
              V +   F   N +  + E  +G  LF  L+  K   FP D+ + +  +L+ +  Y+H
Sbjct: 78  PFIVNMMCSFQDENRVYFLLEFVVGGELFTHLR--KAGRFPNDVAKFYHAELVLAFEYLH 135

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
              +I+ DLKPEN+L                        L     +K+ DFG        
Sbjct: 136 SKDIIYRDLKPENLL------------------------LDNKGHVKVTDFGFAKKVPDR 171

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG------EALFQTHENLEHLA 300
             ++  T  Y APEVI   G     D W++G +L E   G      +  F+ +E +    
Sbjct: 172 TFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKI---- 227

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
           +  R   P                       NW +G                        
Sbjct: 228 LAGRLKFP-----------------------NWFDG------------------------ 240

Query: 361 DRARSTLTDLLHGLLRYDPSERLTA-----RQALNHPFFRNLN 398
            RAR    DL+ GLL+ D ++RL           NHP+F   N
Sbjct: 241 -RAR----DLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGAN 278

Length = 329

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 69.7 bits (170), Expect = 4e-13
 Identities = 59/240 (24%), Positives = 104/240 (43%), Gaps = 42/240 (17%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--GGSSH-- 129
           +G+GTFG+V+   ++ + +  A+K+++         +I  D + H     +    + H  
Sbjct: 3   LGKGTFGKVILVREKASGKYYAMKILKK------EVIIAKDEVAHTLTESRVLKNTRHPF 56

Query: 130 CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
              ++  F  ++ +C V E + G  LF  L R +   F  D  R +G +++ ++ Y+H  
Sbjct: 57  LTSLKYSFQTKDRLCFVMEYVNGGELFFHLSRERV--FSEDRTRFYGAEIVSALDYLHSG 114

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
           ++++ DLK EN++                        L K   IK+ DFG       D  
Sbjct: 115 KIVYRDLKLENLM------------------------LDKDGHIKITDFGLCKEGITDAA 150

Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLEHLAMME 303
              +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 151 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 210

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 67.6 bits (166), Expect = 7e-13
 Identities = 47/245 (19%), Positives = 82/245 (33%), Gaps = 75/245 (30%)

Query: 69  KILSKMGEGTFGRVLECW----DRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKN 122
            +  K+GEG FG V +          +  VA+K ++     +       E  +++ L   
Sbjct: 2   TLGKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLKEDASEQQIEEFLREARIMRKL--- 58

Query: 123 DKGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLV 171
                 H         C +          + IV E    G  L D+L++N+     +  +
Sbjct: 59  -----DHPNIVKLLGVCTE-------EEPLMIVMEYMPGG-DLLDYLRKNRPKELSLSDL 105

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILL-------VS----SEFIKLPGYKRSSSGE 220
             F  Q+   + Y+     IH DL   N L+       +S    S  +    Y +   G+
Sbjct: 106 LSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKVKGGK 165

Query: 221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
           +P R +                               APE +    ++   D+WS G +L
Sbjct: 166 LPIRWM-------------------------------APESLKEGKFTSKSDVWSFGVLL 194

Query: 281 VELCT 285
            E+ T
Sbjct: 195 WEIFT 199

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 67.5 bits (166), Expect = 7e-13
 Identities = 50/247 (20%), Positives = 93/247 (37%), Gaps = 77/247 (31%)

Query: 69  KILSKMGEGTFGRVLECW----DRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKN 122
           ++  K+GEG FG V +         T+ +VA+K ++  +  + R+  + E  +++ L   
Sbjct: 2   ELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLKEGASEEEREEFLEEASIMKKL--- 58

Query: 123 DKGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLV 171
                SH         C Q          + IV E    G  L DFL+++       DL+
Sbjct: 59  -----SHPNIVRLLGVCTQ-------GEPLYIVTEYMPGG-DLLDFLRKHGEKLTLKDLL 105

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--PG----------YKRSSSG 219
            +   Q+ + + Y+     +H DL   N L+  +  +K+   G          Y++   G
Sbjct: 106 -QMALQIAKGMEYLESKNFVHRDLAARNCLVTENLVVKISDFGLSRDIYEDDYYRKRGGG 164

Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 279
           ++P +                               + APE +    ++   D+WS G +
Sbjct: 165 KLPIK-------------------------------WMAPESLKDGKFTSKSDVWSFGVL 193

Query: 280 LVELCTG 286
           L E+ T 
Sbjct: 194 LWEIFTL 200

Length = 258

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 67.8 bits (166), Expect = 7e-13
 Identities = 63/248 (25%), Positives = 104/248 (41%), Gaps = 51/248 (20%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKG 125
           Y+ L  +G G +G V       T   VA+K++       D + I  E+ +L  L ++   
Sbjct: 3   YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPP 62

Query: 126 GSSHCVQIRNWFDYRN--HICIVFEKL-GPSLFDFLK----RNKYCPFPVDLVREFGRQL 178
                   + +  Y     + I+ E   G S+   +K      KY    +       R++
Sbjct: 63  NI-----TKYYGSYLKGPRLWIIMEYAEGGSVRTLMKAGPIAEKYISVII-------REV 110

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L ++ Y+H + +IH D+K  NIL+             +++G            +KL DFG
Sbjct: 111 LVALKYIHKVGVIHRDIKAANILV-------------TNTGN-----------VKLCDFG 146

Query: 239 STAFDNQN---HSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
             A  NQN    S+ V T ++ APEVI  G  +    D+WS+G  + E+ TG   +   +
Sbjct: 147 VAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVD 206

Query: 295 NLEHLAMM 302
                AMM
Sbjct: 207 --AFRAMM 212

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 67.7 bits (165), Expect = 1e-12
 Identities = 61/265 (23%), Positives = 109/265 (41%), Gaps = 45/265 (16%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS----IRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G+FG+VL    +   E  A+K ++     I    +  M+E  VL    +N      +
Sbjct: 3   LGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLY 62

Query: 130 CVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVRE--FGRQLLESVAYM 185
           C      F  + H+  V E L  G  +F    + ++     DL R   +  +++  + ++
Sbjct: 63  CT-----FQTKEHLFFVMEFLNGGDLMFHIQDKGRF-----DLYRATFYAAEIVCGLQFL 112

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAF 242
           H   +I+ DLK +N++L                         +   IK+ DFG      F
Sbjct: 113 HSKGIIYRDLKLDNVML------------------------DRDGHIKIADFGMCKENVF 148

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
            +   S+   T  Y APE++ GL +++  D WS G +L E+  G++ F   +  E    +
Sbjct: 149 GDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESI 208

Query: 303 ERALGPLPEHMIRRASRGTEKYFRR 327
                  P  + + +    EK F R
Sbjct: 209 RVDTPHYPRWITKESKDILEKLFER 233

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 67.7 bits (165), Expect = 1e-12
 Identities = 82/342 (23%), Positives = 130/342 (38%), Gaps = 103/342 (30%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMI-EIDVLQHLAKNDKGGSSH 129
           +G+GTFG+V+   ++ T    A+K++R    I K   A  + E  VLQ+        + H
Sbjct: 3   LGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN--------TRH 54

Query: 130 --CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
                ++  F   + +C V E   G  LF  L R +   F  +  R +G +++ ++ Y+H
Sbjct: 55  PFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSALEYLH 112

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFD 243
              +++ D+K EN++                        L K   IK+ DFG       D
Sbjct: 113 SRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKEGISD 148

Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLEHLAM 301
                +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +
Sbjct: 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 208

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           ME    P                     R   PE                          
Sbjct: 209 MEEIRFP---------------------RTLSPE-------------------------- 221

Query: 362 RARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
            A+S L     GLL+ DP +RL      A++ + H FF ++N
Sbjct: 222 -AKSLLA----GLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 258

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 79/338 (23%), Positives = 138/338 (40%), Gaps = 91/338 (26%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMI-EIDVLQHLAKNDKGGSSH 129
           +G+GTFG+V +   + T+   A+KV+     + K   A  I E ++L     ++   S  
Sbjct: 1   IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDE---SPF 57

Query: 130 CVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V ++  F   + + +V +   G  LF  L++     F  D  + +  +L+ ++ ++H  
Sbjct: 58  IVGLKFSFQTDSDLYLVTDYMSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKY 115

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
            +++ DLKPENILL              ++G            I L DFG   +   DN+
Sbjct: 116 DIVYRDLKPENILL-------------DATGH-----------IALCDFGLSKANLTDNK 151

Query: 246 NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMER 304
             ++   T  Y APEV+L   G++   D WS+G ++ E+C G + F              
Sbjct: 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPF-------------- 197

Query: 305 ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR 364
                 + M R  + G         ++ +P+  +S E  + VK                 
Sbjct: 198 -YAEDTQQMYRNIAFG---------KVRFPKNVLSDEGRQFVK----------------- 230

Query: 365 STLTDLLHGLLRYDPSERL----TARQALNHPFFRNLN 398
                   GLL  +P  RL     A +   HPFF +++
Sbjct: 231 --------GLLNRNPQHRLGAHRDAVELKEHPFFADID 260

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 67.5 bits (165), Expect = 2e-12
 Identities = 73/285 (25%), Positives = 121/285 (42%), Gaps = 42/285 (14%)

Query: 71  LSKMGEGTFGRVL---ECWDRQTQERVAIKVVR-SIRKYRDA--AMIEIDVLQHLAKNDK 124
           L  +G+G+FG+V    +       +  A+KV++ +  K RD     +E D+L  +     
Sbjct: 1   LKVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEV----- 55

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                 V++   F     + ++ + L G  LF  L  +K   F  + V+ +  +L  ++ 
Sbjct: 56  -NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALD 112

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STA 241
           ++H L +I+ DLKPENILL                         +   IKL DFG    +
Sbjct: 113 HLHSLGIIYRDLKPENILL------------------------DEEGHIKLTDFGLSKES 148

Query: 242 FDNQNHS-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
            D++  + S   T  Y APEV+   G +   D WS G ++ E+ TG   FQ  +  E + 
Sbjct: 149 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMT 208

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
           M+ +A   +P+ +   A       F+R        G    E IK 
Sbjct: 209 MILKAKLGMPQFLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKR 253

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 67.7 bits (165), Expect = 2e-12
 Identities = 77/343 (22%), Positives = 132/343 (38%), Gaps = 67/343 (19%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + IL     G  G    C D +T E V IK  +     R     E  +L+ +        
Sbjct: 94  FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----RGGTATEAHILRAINH------ 142

Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFL--KRNKYCPFPVDLVREFGRQLLESVAYM 185
              +Q++  F Y    C++  +    L+ +L  KRN      +  +    R +L ++ Y+
Sbjct: 143 PSIIQLKGTFTYNKFTCLILPRYKTDLYCYLAAKRN----IAICDILAIERSVLRAIQYL 198

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD-- 243
           H+ R+IH D+K ENI      FI  PG                   + L DFG+  F   
Sbjct: 199 HENRIIHRDIKAENI------FINHPG------------------DVCLGDFGAACFPVD 234

Query: 244 -NQN-HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
            N N +     T    APE++    +    D+WS G +L E+ T        + L+    
Sbjct: 235 INANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCD 294

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR-------LKN 354
            +R +    + +IRR+     ++      ++  +  +    I   KK  R         N
Sbjct: 295 SDRQI----KLIIRRSGTHPNEF-----PID-AQANLDEIYIGLAKKSSRKPGSRPLWTN 344

Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           +  L +D     L  L+  +L +D   R +A   L+   F+++
Sbjct: 345 LYELPID-----LEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382

Length = 391

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 66.7 bits (163), Expect = 2e-12
 Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 39/225 (17%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG-- 125
            + +  +G GTFGRV    DR ++   A+KV+ +I +     +I +   QH+  N+K   
Sbjct: 3   LERIKTVGTGTFGRVHLVRDRISEHYYALKVM-AIPE-----VIRLKQEQHV-HNEKRVL 55

Query: 126 -GSSHCVQIRNWFDYR--NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
              SH   IR ++       + ++ E + G  LF +L+ +    F       +  +++ +
Sbjct: 56  KEVSHPFIIRLFWTEHDQRFLYMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCA 113

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H   +++ DLKPENIL                        L K   IKL DFG   
Sbjct: 114 LEYLHSKEIVYRDLKPENIL------------------------LDKEGHIKLTDFGFAK 149

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                  ++  T  Y APEVI   G +   D W++G ++ E+  G
Sbjct: 150 KLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVG 194

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 66.2 bits (161), Expect = 2e-12
 Identities = 60/235 (25%), Positives = 105/235 (44%), Gaps = 44/235 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKND 123
           ++I  K+G G F  V        ++ VA+K V+       K R   + EID+L+ L    
Sbjct: 4   FQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQL---- 59

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFE-----KLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                + ++  + F   N + IV E      L   +  F K+ +    P   V ++  QL
Sbjct: 60  --NHPNVIKYLDSFIEDNELNIVLELADAGDLSQMIKYFKKQKRL--IPERTVWKYFVQL 115

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
             +V +MH  R++H D+KP N+ +             +++G            +KL D G
Sbjct: 116 CSAVEHMHSRRVMHRDIKPANVFI-------------TATGV-----------VKLGDLG 151

Query: 239 STAFDNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
              F +   +   S+V T +Y +PE I   G+++  D+WS+GC+L E+   ++ F
Sbjct: 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 66.4 bits (162), Expect = 3e-12
 Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 43/226 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRKYRDAAMIEIDVLQHLAK 121
            +  L ++G G+FG V    D +T E VAIK +     +S  K++D  + E+  LQ L  
Sbjct: 16  LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQQLR- 73

Query: 122 NDKGGSSHCVQIRNWFDYRNHIC-IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                  + ++ +  +  R H   +V E    S  D L+ +K  P     +       L+
Sbjct: 74  -----HPNTIEYKGCY-LREHTAWLVMEYCLGSASDILEVHKK-PLQEVEIAAICHGALQ 126

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            +AY+H    IH D+K  NILL        PG                   +KL DFGS 
Sbjct: 127 GLAYLHSHERIHRDIKAGNILLTE------PG------------------TVKLADFGSA 162

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVEL 283
           +  +  + S V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 163 SLVSPAN-SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 66.6 bits (162), Expect = 4e-12
 Identities = 64/250 (25%), Positives = 107/250 (42%), Gaps = 46/250 (18%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK-GGSSH--C 130
           +G+GTFG+V+   ++ T    A+K+++     ++  + + +V   L +N     S H   
Sbjct: 3   LGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTENRVLQNSRHPFL 57

Query: 131 VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR 189
             ++  F   + +C V E   G  LF  L R +   F  D  R +G +++ ++ Y+H  +
Sbjct: 58  TALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALDYLHSEK 115

Query: 190 -LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
            +++ DLK EN++L                         K   IK+ DFG       D  
Sbjct: 116 NVVYRDLKLENLML------------------------DKDGHIKITDFGLCKEGIKDGA 151

Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLEHLAMME 303
              +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L  L +ME
Sbjct: 152 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILME 211

Query: 304 -----RALGP 308
                R L P
Sbjct: 212 EIRFPRTLSP 221

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 65.6 bits (160), Expect = 5e-12
 Identities = 79/338 (23%), Positives = 129/338 (38%), Gaps = 81/338 (23%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGG 126
           Y++L   G+G FG V  C  R T +  A K +   R K R    + ++  Q L K +   
Sbjct: 5   YRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN--- 58

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP-FPVDLVREFGRQLLESVAYM 185
           S   V +   ++ ++ +C+V   +      F   N   P F  +    +  ++   +  +
Sbjct: 59  SRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDL 118

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H  R+++ DLKPENILL         G+ R S        L  +  I          + +
Sbjct: 119 HRERIVYRDLKPENILLDDY------GHIRISD-------LGLAVEIP---------EGE 156

Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
                V T  Y APEV+    +++  D W +GC++ E+  G++ F+  +       ++R 
Sbjct: 157 TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKE-----KVKR- 210

Query: 306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS 365
                E + RR     E+Y  + S                               + ARS
Sbjct: 211 -----EEVERRVKEDQEEYSEKFS-------------------------------EAARS 234

Query: 366 TLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
               +   LL  DP  RL      A +   HPFFR  N
Sbjct: 235 ----ICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTAN 268

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score = 65.2 bits (159), Expect = 7e-12
 Identities = 79/340 (23%), Positives = 135/340 (39%), Gaps = 91/340 (26%)

Query: 66  PRYKI--LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQ--HL 119
           PR  +    K+GEG+ G V    D+ T  +VA+K +  +RK   R+    E+ +++    
Sbjct: 17  PRSYLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKM-DLRKQQRRELLFNEVVIMRDYQH 75

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
               +  SS+ V    W        +V E L G +L D +   +      + +      +
Sbjct: 76  PNIVEMYSSYLVGDELW--------VVMEFLEGGALTDIVTHTR---MNEEQIATVCLAV 124

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLID 236
           L++++++H   +IH D+K ++ILL S   +KL   G+    S E+P R            
Sbjct: 125 LKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRR------------ 172

Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                       S+V T ++ APEVI  L +    D+WS+G +++E+  GE  +     L
Sbjct: 173 -----------KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL 221

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           + +  +   L P                                          +LKN+ 
Sbjct: 222 QAMKRIRDNLPP------------------------------------------KLKNLH 239

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                +    L   L  +L  DP++R TA + LNHPF   
Sbjct: 240 -----KVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAK 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 65.6 bits (160), Expect = 7e-12
 Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 46/238 (19%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKND---K 124
           + + S +G G FG V    ++ T +  A+KV++     +   + +  V     + D    
Sbjct: 3   FDVKSLVGRGHFGEVQVVREKATGDIYAMKVMK-----KSVLLAQETVSFFEEERDILSI 57

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYC-PFPVDLVREFGRQLLESV 182
             S    Q++  F  ++++ +V E   G  L   L  N+Y   F  D+ + +  +L+ ++
Sbjct: 58  SNSPWIPQLQYAFQDKDNLYLVMEYQPGGDLLSLL--NRYEDQFDEDMAQFYLAELVLAI 115

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H +  +H D+KPEN+L                        + ++  IKL DFGS A 
Sbjct: 116 HSVHQMGYVHRDIKPENVL------------------------IDRTGHIKLADFGSAAR 151

Query: 243 DNQNH----SSIVSTRHYRAPEVILGL----GWSY--PCDMWSVGCILVELCTGEALF 290
              N        V T  Y APEV+  +      +Y   CD WS+G I  E+  G + F
Sbjct: 152 LTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF 209

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 63.7 bits (156), Expect = 1e-11
 Identities = 47/245 (19%), Positives = 84/245 (34%), Gaps = 76/245 (31%)

Query: 69  KILSKMGEGTFGRVLECW----DRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKN 122
            +  K+GEG FG V +        + +  VA+K ++     +       E  +++ L   
Sbjct: 2   TLGKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLKEDASEQQIEEFLREARIMRKL--- 58

Query: 123 DKGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLV 171
                 H         C +          + IV E  + G  L  +L++N+     +  +
Sbjct: 59  -----DHPNVVKLLGVCTE-------EEPLYIVMEYMEGG-DLLSYLRKNR-PKLSLSDL 104

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--PG---------YKRSSSGE 220
             F  Q+   + Y+     IH DL   N L+  +  +K+   G         Y R   G+
Sbjct: 105 LSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYRKRGGK 164

Query: 221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
           +P R +                               APE +    ++   D+WS G +L
Sbjct: 165 LPIRWM-------------------------------APESLKEGKFTSKSDVWSFGVLL 193

Query: 281 VELCT 285
            E+ T
Sbjct: 194 WEIFT 198

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 64.9 bits (158), Expect = 2e-11
 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 18/140 (12%)

Query: 67  RYKILSKMGEGTFGRVLEC--WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK 124
           +Y ILS +  G+ G V  C     + +++V +K V      +     EID+L+ +     
Sbjct: 93  QYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVT---GGKTPGR-EIDILKTI----- 143

Query: 125 GGSSHCVQIRNWFDYRNH--ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
              SH   I     YR    +C+V  K    LF ++ R+   P P++      R+LLE++
Sbjct: 144 ---SHRAIINLIHAYRWKSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEAL 198

Query: 183 AYMHDLRLIHTDLKPENILL 202
           AY+H   +IH D+K ENI L
Sbjct: 199 AYLHGRGIIHRDVKTENIFL 218

Length = 392

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 64.0 bits (156), Expect = 2e-11
 Identities = 65/288 (22%), Positives = 108/288 (37%), Gaps = 64/288 (22%)

Query: 69  KILSKMGEGTFGRV-LECWD---RQTQERVAIKVVR------SIRKYRDAAMIEIDVLQH 118
           K + ++GEG FG+V L  +D     T E+VA+K +           +      EI++L+ 
Sbjct: 7   KFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFER----EIEILRT 62

Query: 119 LAKNDKGGSSHCVQIRNWFD--YRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFG 175
           L         + V+ +   +      + ++ E L   SL D+L+R++       L+  F 
Sbjct: 63  LD------HENIVKYKGVCEKPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLL-FS 115

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            Q+ + + Y+   R IH DL   NIL+ S + +K+                         
Sbjct: 116 SQICKGMDYLGSQRYIHRDLAARNILVESEDLVKIS------------------------ 151

Query: 236 DFGSTAFDNQNHSSIVSTR------HYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
           DFG      ++               + APE +    +S   D+WS G  L EL T    
Sbjct: 152 DFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDP 211

Query: 290 FQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEG 336
            Q     E L M+  A G  +   ++           + G RL  P  
Sbjct: 212 SQ-SPPAEFLRMIGIAQGQMIVTRLLEL--------LKEGERLPRPPS 250

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 64.1 bits (156), Expect = 3e-11
 Identities = 43/148 (29%), Positives = 62/148 (41%), Gaps = 24/148 (16%)

Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP-------------- 211
           F  DL R +  +L  ++  +H +  IH D+KP+NIL+     IKL               
Sbjct: 98  FEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157

Query: 212 ------GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVI 262
                  + R  S E P     +    +L                 S+V T +Y APEV+
Sbjct: 158 KYYQKGDHHRQDSME-PSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVL 216

Query: 263 LGLGWSYPCDMWSVGCILVELCTGEALF 290
           L  G++  CD WSVG IL E+  G+  F
Sbjct: 217 LRTGYTQLCDWWSVGVILYEMLVGQPPF 244

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 63.6 bits (155), Expect = 3e-11
 Identities = 63/264 (23%), Positives = 101/264 (38%), Gaps = 51/264 (19%)

Query: 141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPE 198
             I I  E + G SL   LK+    P  +  + +    +L  + Y+ +  +++H D+KP 
Sbjct: 72  GEISICMEHMDGGSLDQVLKKAGRIPENI--LGKISIAVLRGLTYLREKHKIMHRDVKPS 129

Query: 199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSIVSTRHYR 257
           NIL+             +S GE           IKL DFG S    +   +S V TR Y 
Sbjct: 130 NILV-------------NSRGE-----------IKLCDFGVSGQLIDSMANSFVGTRSYM 165

Query: 258 APEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRA 317
           +PE + G  ++   D+WS+G  LVE+  G       +  E  AM  R +         R 
Sbjct: 166 SPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHR- 224

Query: 318 SRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV----DRARST-LTDLLH 372
                           P      +S + +   + L  +V+         A S    D + 
Sbjct: 225 ----------------PVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVD 268

Query: 373 GLLRYDPSERLTARQALNHPFFRN 396
             L+ +P ER   ++   HPF + 
Sbjct: 269 KCLKKNPKERADLKELTKHPFIKR 292

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 62.3 bits (151), Expect = 6e-11
 Identities = 52/229 (22%), Positives = 108/229 (47%), Gaps = 34/229 (14%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++++  +G GT+G+V +    +T +  AIKV+       +   +EI++L+  + +    +
Sbjct: 18  FELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIAT 77

Query: 128 SHCVQIRNW-FDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
            +   I+     + + + +V E  G  S+ D +K  K      D +    R++L  +A++
Sbjct: 78  YYGAFIKKSPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHL 137

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H  ++IH D+K +N+LL                         +++ +KL+DFG +A  ++
Sbjct: 138 HAHKVIHRDIKGQNVLLT------------------------ENAEVKLVDFGVSAQLDR 173

Query: 246 N---HSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTG 286
                ++ + T ++ APEVI         + Y  D+WS+G   +E+  G
Sbjct: 174 TVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEG 222

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 62.4 bits (151), Expect = 6e-11
 Identities = 85/369 (23%), Positives = 145/369 (39%), Gaps = 97/369 (26%)

Query: 30  VGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQ 89
           V HE   AA    VSP    D RE    F              K+GEG+ G V    ++ 
Sbjct: 2   VSHEQFRAALQLVVSP---GDPREYLDSF-------------IKIGEGSTGIVCIATEKH 45

Query: 90  TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK 149
           T ++VA+K +   ++ R   +    V+     ++     + V + N +   + + +V E 
Sbjct: 46  TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHE-----NVVDMYNSYLVGDELWVVMEF 100

Query: 150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI 208
           L G +L D +   +      + +      +L +++Y+H+  +IH D+K ++ILL S   I
Sbjct: 101 LEGGALTDIVTHTR---MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRI 157

Query: 209 KLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG 266
           KL   G+    S E+P R                        S+V T ++ APEVI  L 
Sbjct: 158 KLSDFGFCAQVSKEVPKR-----------------------KSLVGTPYWMAPEVISRLP 194

Query: 267 WSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFR 326
           +    D+WS+G +++E+  GE  +     L+ +  +   L P                  
Sbjct: 195 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPP------------------ 236

Query: 327 RGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTAR 386
                                   R+K+       +  S L   L  +L  +PS+R TA+
Sbjct: 237 ------------------------RVKDS-----HKVSSVLRGFLDLMLVREPSQRATAQ 267

Query: 387 QALNHPFFR 395
           + L HPF +
Sbjct: 268 ELLQHPFLK 276

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 62.0 bits (150), Expect = 8e-11
 Identities = 76/336 (22%), Positives = 128/336 (38%), Gaps = 89/336 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +Y    K+G+G  G V    D  T + VAIK +   ++ +   +I   ++    KN    
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNP--- 76

Query: 127 SSHCVQIRNWFDYR---NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                 I N+ D     + + +V E L G SL D +     C      +    R+ L+++
Sbjct: 77  -----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 128

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++H  ++IH D+K +NILL                            ++KL DFG  A 
Sbjct: 129 DFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCAQ 164

Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
              +    S++V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L
Sbjct: 165 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL 224

Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
            ++              A+ GT +       L  PE                        
Sbjct: 225 YLI--------------ATNGTPE-------LQNPE------------------------ 239

Query: 360 VDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
             R  +   D L+  L  D   R +A++ L HPF +
Sbjct: 240 --RLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 62.3 bits (151), Expect = 1e-10
 Identities = 69/265 (26%), Positives = 113/265 (42%), Gaps = 53/265 (20%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKND---KGGS 127
           +  +G G FG V  C  R+   + A+  ++++RK +D  ++   V    A+ D   +  +
Sbjct: 6   IKTLGIGAFGEV--CLARKVDTK-ALYAMKTLRK-KDV-LLRNQVAHVKAERDILAEADN 60

Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
              V++   F  ++++  V + + G  +   L R     FP DL R +  +L  +V  +H
Sbjct: 61  EWVVRLYYSFQDKDNLYFVMDYIPGGDMMSLLIRMGI--FPEDLARFYIAELTCAVESVH 118

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGY------------KRSSSGEMPFRCLPKSSAIKL 234
            +  IH D+KP+NIL+     IKL  +            K   SG+   +          
Sbjct: 119 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQ--------DS 170

Query: 235 IDFGSTAFDNQN----------------------HSSIVSTRHYRAPEVILGLGWSYPCD 272
           +DF +   D  N                        S+V T +Y APEV+L  G++  CD
Sbjct: 171 MDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCD 230

Query: 273 MWSVGCILVELCTGEALFQTHENLE 297
            WSVG IL E+  G+  F     LE
Sbjct: 231 WWSVGVILYEMLVGQPPFLAQTPLE 255

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 61.6 bits (150), Expect = 1e-10
 Identities = 69/338 (20%), Positives = 122/338 (36%), Gaps = 94/338 (27%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS----IRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G+FG+VL    + T E  A+KV++          +  M E  VL  LA         
Sbjct: 3   LGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLA-LAGK----HPF 57

Query: 130 CVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
             Q+ + F  ++ +  V E +  G  +F   +  +   F     R +  +++  + ++H+
Sbjct: 58  LTQLHSCFQTKDRLFFVMEYVNGGDLMFHIQRSGR---FDEPRARFYAAEIVLGLQFLHE 114

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
             +I+ DLK +N+LL S   IK+  +     G               I  G T       
Sbjct: 115 RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEG---------------ILGGVTT------ 153

Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLEHLAMMERA 305
           S+   T  Y APE++    +    D W++G +L E+  G++ F     + L    + +  
Sbjct: 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEV 213

Query: 306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS 365
               P  +                            S +A                    
Sbjct: 214 R--YPRWL----------------------------SKEAK------------------- 224

Query: 366 TLTDLLHGLLRYDPSERL----TARQAL-NHPFFRNLN 398
               +L   L  +P +RL    T  Q +  HPFFR ++
Sbjct: 225 ---SILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREID 259

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 61.8 bits (150), Expect = 1e-10
 Identities = 76/309 (24%), Positives = 120/309 (38%), Gaps = 60/309 (19%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKV--VRSIRKYRDAAMIEIDVLQH------- 118
           +  +  +G+G FG V     R  Q++   K+  ++++ K   + M + D L H       
Sbjct: 3   FHTVKVIGKGAFGEV-----RLVQKKDTGKIYAMKTLLK---SEMFKKDQLAHVKAERDV 54

Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQ 177
           LA++D   S   V +   F    ++ ++ E L G  L   L   KY  F  D+ R +  +
Sbjct: 55  LAESD---SPWVVSLYYSFQDAQYLYLIMEFLPGGDLMTMLI--KYDTFSEDVTRFYMAE 109

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG---------------YKRSSSGEM- 221
            + ++  +H L  IH D+KP+NIL+     IKL                 Y++   G+  
Sbjct: 110 CVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSN 169

Query: 222 -PFRCLPKSSAIKLIDFGSTAFDNQNH---------SSIVSTRHYRAPEVILGLGWSYPC 271
                   S A+  I+   ++ D              S V T  Y APE+ L  G+   C
Sbjct: 170 KNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQEC 229

Query: 272 DMWSVGCILVELCTGEALF---QTHENLEHLAMMERAL--------GPLPEHMIRRASRG 320
           D WS+G I+ E   G   F    +HE    +      L            E +IRR    
Sbjct: 230 DWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLITN 289

Query: 321 TEKYFRRGS 329
            E    RG 
Sbjct: 290 AENRLGRGG 298

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 60.0 bits (145), Expect = 3e-10
 Identities = 58/235 (24%), Positives = 100/235 (42%), Gaps = 44/235 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKND 123
           ++I  K+G G F  V           VA+K V+       K R   + EID+L+ L    
Sbjct: 4   FRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL---- 59

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFE-----KLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                + ++    F   N + IV E      L   +  F K+ +    P   V ++  QL
Sbjct: 60  --NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL--IPEKTVWKYFVQL 115

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
             ++ +MH  R++H D+KP N+ + ++                          +KL D G
Sbjct: 116 CSALEHMHSRRVMHRDIKPANVFITAT------------------------GVVKLGDLG 151

Query: 239 STAFDNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
              F +   +   S+V T +Y +PE I   G+++  D+WS+GC+L E+   ++ F
Sbjct: 152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 206

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 59.9 bits (145), Expect = 4e-10
 Identities = 74/337 (21%), Positives = 130/337 (38%), Gaps = 91/337 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI-EIDVLQHLAKNDKG 125
           +Y    K+G+G  G V    D  T + VAIK +   ++ +   +I EI V++     +  
Sbjct: 20  KYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPN-- 77

Query: 126 GSSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                  I N+ D     + + +V E L G SL D +            +    R+ L++
Sbjct: 78  -------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQA 127

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + ++H  ++IH D+K +NILL                            ++KL DFG  A
Sbjct: 128 LEFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCA 163

Query: 242 F---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
               +    S++V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  
Sbjct: 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA 223

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
           L ++              A+ GT            PE                       
Sbjct: 224 LYLI--------------ATNGT------------PELQ--------------------- 236

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
           + ++  +   D L+  L  D  +R +A++ L HPF +
Sbjct: 237 NPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 59.7 bits (144), Expect = 4e-10
 Identities = 78/334 (23%), Positives = 134/334 (40%), Gaps = 85/334 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI-EIDVLQHLAKNDKG 125
           +Y    K+G+G  G V    D  T + VAIK +   ++ +   +I EI V++ L KN   
Sbjct: 20  KYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKEL-KN--- 75

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
              + V   + F   + + +V E L G SL D +         +  V    R+ L+++ +
Sbjct: 76  --PNIVNFLDSFLVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAV---CRECLQALEF 130

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-- 242
           +H  ++IH D+K +N+LL                            ++KL DFG  A   
Sbjct: 131 LHANQVIHRDIKSDNVLL------------------------GMDGSVKLTDFGFCAQIT 166

Query: 243 -DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
            +    S++V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L +
Sbjct: 167 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYL 226

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           +              A+ GT            PE                L+N      +
Sbjct: 227 I--------------ATNGT------------PE----------------LQN-----PE 239

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
           +      D L+  L  D  +R +A++ L HPF +
Sbjct: 240 KLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 59.7 bits (144), Expect = 5e-10
 Identities = 53/251 (21%), Positives = 113/251 (45%), Gaps = 34/251 (13%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++++  +G GT+G+V +    +T +  AIKV+       +    EI++L+  + +    +
Sbjct: 8   FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 67

Query: 128 SHCVQIR-NWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
            +   I+ N     + + +V E  G  S+ D +K  K      + +    R++L  ++++
Sbjct: 68  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 127

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H  ++IH D+K +N+LL                         +++ +KL+DFG +A  ++
Sbjct: 128 HQHKVIHRDIKGQNVLLT------------------------ENAEVKLVDFGVSAQLDR 163

Query: 246 N---HSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                ++ + T ++ APEVI         + +  D+WS+G   +E+  G         + 
Sbjct: 164 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR 223

Query: 298 HLAMMERALGP 308
            L ++ R   P
Sbjct: 224 ALFLIPRNPAP 234

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 60.0 bits (145), Expect = 5e-10
 Identities = 85/350 (24%), Positives = 135/350 (38%), Gaps = 96/350 (27%)

Query: 68  YKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVRSI-----RKYRDAAMIEIDVLQHL 119
           +++L  +G G +G+V    +     T +  A+KV++        K  +    E +VL+H+
Sbjct: 2   FELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHV 61

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
            +     S   V +   F     + ++ + + G  +F  L +     F  D VR +  ++
Sbjct: 62  RQ-----SPFLVTLHYAFQTEAKLHLILDYVSGGEMFTHLYQRDN--FSEDEVRFYSGEI 114

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + ++ ++H L +++ D+K ENILL              S G            + L DFG
Sbjct: 115 ILALEHLHKLGIVYRDIKLENILL-------------DSEGH-----------VVLTDFG 150

Query: 239 -STAF---DNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
            S  F   + +   S   T  Y APE+I G  G     D WS+G ++ EL TG + F   
Sbjct: 151 LSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPF--- 207

Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
             LE                              G R    E  VSR  +K         
Sbjct: 208 -TLE------------------------------GERNTQSE--VSRRILKCDPPFPSFI 234

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
              +           DLLH LLR DP +RL      A +   HPFF+ L+
Sbjct: 235 GPEA----------QDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGLD 274

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 59.6 bits (144), Expect = 5e-10
 Identities = 77/339 (22%), Positives = 127/339 (37%), Gaps = 81/339 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKG 125
           +Y++L   G+G FG V  C  R T +  A K +   R K R    + ++  Q L   +K 
Sbjct: 4   QYRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQIL---EKV 57

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S   V +   ++ ++ +C+V   + G  L   +       F       +  ++   +  
Sbjct: 58  NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLED 117

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H  R+++ DLKPENILL     I++     +         +P+   IK           
Sbjct: 118 LHQERIVYRDLKPENILLDDHGHIRISDLGLAVH-------VPEGQTIK----------- 159

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMER 304
                 V T  Y APEV+    +++  D W++GC+L E+  G++ FQ  +       +ER
Sbjct: 160 ----GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVER 215

Query: 305 ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR 364
            +  + E    + S                                            AR
Sbjct: 216 LVKEVQEEYSEKFS------------------------------------------PDAR 233

Query: 365 STLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
           S    L   LL  DP ERL      AR+   HP F+ +N
Sbjct: 234 S----LCKMLLCKDPKERLGCQGGGAREVKEHPLFKQIN 268

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 59.7 bits (145), Expect = 6e-10
 Identities = 59/238 (24%), Positives = 101/238 (42%), Gaps = 60/238 (25%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA--MIEIDVLQHLAKNDKGGSS 128
           L ++G G FG V +   + +   +A+K +RS    ++    ++++DV+          SS
Sbjct: 9   LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMR--------SS 60

Query: 129 HCVQIRNWFDYRNH-----IC-----IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
            C  I  ++          IC     I  +K    +++ LK       P +++ +     
Sbjct: 61  DCPYIVKFYGALFREGDCWICMELMDISLDKFYKYVYEVLKSV----IPEEILGKIAVAT 116

Query: 179 LESVAYM-HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           ++++ Y+  +L++IH D+KP NIL                        L ++  IKL DF
Sbjct: 117 VKALNYLKEELKIIHRDVKPSNIL------------------------LDRNGNIKLCDF 152

Query: 238 GSTAFDNQNHSSIVSTRH-----YRAPEVIL---GLGWSYPCDMWSVGCILVELCTGE 287
           G +    Q   SI  TR      Y APE I      G+    D+WS+G  L E+ TG+
Sbjct: 153 GISG---QLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGK 207

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 59.7 bits (144), Expect = 6e-10
 Identities = 64/222 (28%), Positives = 96/222 (43%), Gaps = 43/222 (19%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRKYRDAAMIEIDVLQHLAKNDKG 125
           L ++G G+FG V    D +T E VAIK +     +S  K++D  + E+  LQ +   +  
Sbjct: 30  LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDI-IKEVKFLQRIKHPNSI 88

Query: 126 GSSHCVQIRNWFDYRNHIC-IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               C         R H   +V E    S  D L+ +K  P     +       L+ +AY
Sbjct: 89  EYKGCY-------LREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAITHGALQGLAY 140

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H   +IH D+K  NILL        PG                   +KL DFGS +  +
Sbjct: 141 LHSHNMIHRDIKAGNILLTE------PG------------------QVKLADFGSASIAS 176

Query: 245 QNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVEL 283
              +S V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 177 PA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 217

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 59.1 bits (144), Expect = 6e-10
 Identities = 78/346 (22%), Positives = 133/346 (38%), Gaps = 103/346 (29%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           +N     K+  K+ +G FG+V     + TQ+    K++++  K  +A  IE  V   L K
Sbjct: 14  KNCEIVKKL--KLIDGKFGKVSVLKHKPTQKLFVQKIIKA--KNFNA--IEPMV-HQLMK 66

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           ++     + +++           ++ + +    LFD LK+          V++  RQL+E
Sbjct: 67  DNP----NFIKLYYSVTTLKGHVLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVE 120

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
           ++  +H   +IH D+K EN+L           Y R                I L D+G  
Sbjct: 121 ALNDLHKHNIIHNDIKLENVL-----------YDR------------AKDRIYLCDYGLC 157

Query: 239 -----STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
                 + +D         T  Y +PE I G  +    D W+VG +  EL TG+  F+  
Sbjct: 158 KIIGTPSCYD--------GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKED 209

Query: 294 --ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
             E L+             E +++R                              KKL  
Sbjct: 210 EDEELD------------LESLLKRQQ----------------------------KKLPF 229

Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA-RQALNHPFFRN 396
           +KN VS +   A     D +  +L+Y+ + RLT   + + HPF + 
Sbjct: 230 IKN-VSKN---AN----DFVQSMLKYNINYRLTNYNEIIKHPFLKI 267

Length = 267

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 59.6 bits (144), Expect = 7e-10
 Identities = 63/243 (25%), Positives = 100/243 (41%), Gaps = 36/243 (14%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G+FG+VL    +   +  A+KV++      RK +   M E +VL    KN K     
Sbjct: 3   IGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVL---LKNVK--HPF 57

Query: 130 CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V +   F     +  V + + G  LF  L+R +   FP    R +  ++  ++ Y+H +
Sbjct: 58  LVGLHYSFQTTEKLYFVLDFVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSI 115

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
            +++ DLKPENILL S   + L  +     G            I   D  +T        
Sbjct: 116 NIVYRDLKPENILLDSQGHVVLTDFGLCKEG------------IAQSDTTTT-------- 155

Query: 249 SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF---QTHENLEHLAMMERA 305
               T  Y APEVI    +    D W +G +L E+  G   F      E  +++      
Sbjct: 156 -FCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLV 214

Query: 306 LGP 308
           L P
Sbjct: 215 LRP 217

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 58.3 bits (141), Expect = 8e-10
 Identities = 74/324 (22%), Positives = 124/324 (38%), Gaps = 96/324 (29%)

Query: 77  GTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW 136
           G   +VL   D +TQ+     +++ +RK  + +   + ++ H          + V +  +
Sbjct: 4   GVIDKVLLVMDTRTQQTF---ILKGLRKSSEYSRERLTIIPH-------CVPNMVCLHKY 53

Query: 137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDL 195
               + + +V +   G  L+  +  +K+   P + V+ +  +++ ++  +H   ++  DL
Sbjct: 54  IVSEDSVFLVLQHAEGGKLWSHI--SKFLNIPEECVKRWAAEMVVALDALHREGIVCRDL 111

Query: 196 KPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRH 255
            P NILL     I+L  + R S  E+   C     A++                      
Sbjct: 112 NPNNILLDDRGHIQLTYFSRWS--EVEDSC--DGEAVE--------------------NM 147

Query: 256 YRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIR 315
           Y APEV      +  CD WS+G IL EL TG+ L + H                P  +  
Sbjct: 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECH----------------PSGINT 191

Query: 316 RASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL 375
             +            LN PE  VS E                     ARS    LL  LL
Sbjct: 192 HTT------------LNIPE-WVSEE---------------------ARS----LLQQLL 213

Query: 376 RYDPSERLTARQA-----LNHPFF 394
           +++P+ERL A  A      +HPFF
Sbjct: 214 QFNPTERLGAGVAGVEDIKSHPFF 237

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 59.3 bits (143), Expect = 8e-10
 Identities = 55/220 (25%), Positives = 100/220 (45%), Gaps = 29/220 (13%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH--CV 131
           +G G++ +VL    ++T+   A+KVV+      D    +ID +Q      +  S+H   V
Sbjct: 3   IGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDE---DIDWVQTEKHVFEQASNHPFLV 59

Query: 132 QIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
            + + F   + +  V E + G  L   ++R +    P +  R +  ++  ++ Y+H+  +
Sbjct: 60  GLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGI 117

Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSI 250
           I+ DLK +N+LL S   IKL  Y     G  P               G T       S+ 
Sbjct: 118 IYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---------------GDTT------STF 156

Query: 251 VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
             T +Y APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 58.7 bits (142), Expect = 9e-10
 Identities = 38/142 (26%), Positives = 63/142 (44%), Gaps = 30/142 (21%)

Query: 177 QLLESVAYMH-DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           Q++ ++ Y+H + R++H DL P NI+L   +                         + + 
Sbjct: 121 QMVLALRYLHKEKRIVHRDLTPNNIMLGEDD------------------------KVTIT 156

Query: 236 DFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
           DFG           +S+V T  Y  PE++    +    D+W+ GCIL ++CT +  F + 
Sbjct: 157 DFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYS- 215

Query: 294 ENLEHLAM--MERALGPLPEHM 313
            N+  LA   +E    PLPE M
Sbjct: 216 TNMLSLATKIVEAVYEPLPEGM 237

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 58.6 bits (141), Expect = 1e-09
 Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 42/243 (17%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +Y    K+G+G  G V    D  T + VAI+ +   ++ +   +I   ++    KN    
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77

Query: 127 SSHCVQIRNWFDYR---NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                 I N+ D     + + +V E L G SL D +     C      +    R+ L+++
Sbjct: 78  -----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 129

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++H  ++IH D+K +NILL                            ++KL DFG  A 
Sbjct: 130 EFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCAQ 165

Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
              +    S++V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225

Query: 300 AMM 302
            ++
Sbjct: 226 YLI 228

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 58.1 bits (140), Expect = 1e-09
 Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 39/253 (15%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           Y  +  +G+G++G V     R   ++  IK +    + R+ R AA  E  +L  L     
Sbjct: 2   YCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKH--- 58

Query: 125 GGSSHCVQIR-NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
               + V  R +W      + IV     G  L+  LK  K    P + V E+  Q+  ++
Sbjct: 59  ---PNIVAYRESWEGEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMAL 115

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
            Y+H+  ++H DLK +N+ L                         +++ IK+ D G +  
Sbjct: 116 QYLHEKHILHRDLKTQNVFLT------------------------RTNIIKVGDLGIARV 151

Query: 242 FDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE-NLEH 298
            +NQ    S+++ T +Y +PE+     ++Y  D+W++GC + E+ T +  F   + N   
Sbjct: 152 LENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLV 211

Query: 299 LAMMERALGPLPE 311
             ++E  L P+P+
Sbjct: 212 YRIIEGKLPPMPK 224

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 80/339 (23%), Positives = 134/339 (39%), Gaps = 81/339 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKG 125
           +Y++L   G+G FG V  C  R T +  A K +   R K R    + ++  Q L   +K 
Sbjct: 4   QYRVL---GKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQIL---EKV 57

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP-FPVDLVREFGRQLLESVAY 184
            S   V +   ++ ++ +C+V   +      F   N   P F  +    +  ++L  +  
Sbjct: 58  NSQFVVNLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLED 117

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H    ++ DLKPENILL         G+ R S   +  + +P+  +I+           
Sbjct: 118 LHRENTVYRDLKPENILLDDY------GHIRISDLGLAVK-IPEGESIR----------- 159

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMER 304
                 V T  Y APEV+    ++   D W +GC++ E+  G++ F+  +       ++R
Sbjct: 160 ----GRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKE-----KVKR 210

Query: 305 ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR 364
                 E + RR     E Y  + S           E  K++ K+               
Sbjct: 211 ------EEVDRRVLETEEVYSAKFS-----------EEAKSICKM--------------- 238

Query: 365 STLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                    LL  DP +RL      A +   HPFFRN+N
Sbjct: 239 ---------LLTKDPKQRLGCQEEGAGEVKRHPFFRNMN 268

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 57.7 bits (139), Expect = 2e-09
 Identities = 54/233 (23%), Positives = 104/233 (44%), Gaps = 39/233 (16%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I+  +G+GT+G+V +  +++   + A+K++  I    +    E ++L+ L+ +     
Sbjct: 20  WEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVK 79

Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFD----FLKRNKYCPFPVDLVREFGRQLLESV 182
            + +  +      + + +V E   G S+ D    FLKR +    P  ++     + L  +
Sbjct: 80  FYGMYYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEP--IIAYILHEALMGL 137

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
            ++H  + IH D+K  NILL +                           +KL+DFG +A 
Sbjct: 138 QHLHVNKTIHRDVKGNNILLTT------------------------EGGVKLVDFGVSAQ 173

Query: 242 FDNQNH--SSIVSTRHYRAPEVI-----LGLGWSYPCDMWSVGCILVELCTGE 287
             +     ++ V T  + APEVI     L   +   CD+WS+G   +EL  G+
Sbjct: 174 LTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGD 226

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 64/232 (27%), Positives = 102/232 (43%), Gaps = 39/232 (16%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAA--MIEIDVLQHLAKNDKGGSSH 129
           +G+G+FG+VL    +  ++  A+KV+  ++I K ++    M E +VL    KN K     
Sbjct: 3   IGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVL---LKNVK--HPF 57

Query: 130 CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V +   F   + +  V + + G  LF  L+R + C F     R +  ++  ++ Y+H L
Sbjct: 58  LVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-C-FLEPRARFYAAEIASALGYLHSL 115

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD---NQ 245
            +++ DLKPENILL              S G            I L DFG    +   N 
Sbjct: 116 NIVYRDLKPENILL-------------DSQGH-----------IVLTDFGLCKENIEHNG 151

Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
             S+   T  Y APEV+    +    D W +G +L E+  G   F +    E
Sbjct: 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 203

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 61/244 (25%), Positives = 106/244 (43%), Gaps = 45/244 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
           ++I+  +G G FG V     + T+   A+K++      + A       E +VL +     
Sbjct: 3   FEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVN----- 57

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            G       +   F   N++ +V +  +G  L   L + +    P D+ R +  +++ ++
Sbjct: 58  -GDCQWITTLHYAFQDENYLYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYIAEMVLAI 115

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H L  +H D+KP+N+LL       + G+                  I+L DFGS   
Sbjct: 116 HSIHQLHYVHRDIKPDNVLL------DMNGH------------------IRLADFGSCLK 151

Query: 243 DNQN---HSSI-VSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILVELCTGEALFQTH 293
            NQ+    SS+ V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F   
Sbjct: 152 MNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAE 211

Query: 294 ENLE 297
             +E
Sbjct: 212 SLVE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 57.3 bits (138), Expect = 3e-09
 Identities = 48/218 (22%), Positives = 99/218 (45%), Gaps = 25/218 (11%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G++ +VL    ++  +  A+KVV+    + D  +  +   +H+ +     +   V +
Sbjct: 3   IGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQ-ASSNPFLVGL 61

Query: 134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIH 192
            + F   + + +V E + G  L   ++R +    P +  R +  ++  ++ ++H+  +I+
Sbjct: 62  HSCFQTTSRLFLVIEYVNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERGIIY 119

Query: 193 TDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVS 252
            DLK +N+LL +   IKL  Y     G  P               G T       S+   
Sbjct: 120 RDLKLDNVLLDADGHIKLTDYGMCKEGLGP---------------GDTT------STFCG 158

Query: 253 TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           T +Y APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 159 TPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPF 196

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 56.8 bits (137), Expect = 4e-09
 Identities = 61/229 (26%), Positives = 98/229 (42%), Gaps = 37/229 (16%)

Query: 67  RY-KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVRS--IRKYRDAAMIEIDVLQHL 119
           RY K +  +GEG FG+V L C+D     T E VA+K ++    ++       EI++L+ L
Sbjct: 4   RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTL 63

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
              +      C   +        + + +  LG SL D+L ++K     + L   F +Q+ 
Sbjct: 64  YHENIVKYKGCCSEQG--GKGLQLIMEYVPLG-SLRDYLPKHKLNLAQLLL---FAQQIC 117

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY---KRSSSGEMPFRCLPKSSAIKLID 236
           E +AY+H    IH DL   N+LL +   +K+  +   K    G   +R            
Sbjct: 118 EGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRV----------- 166

Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
                   ++  S V    + A E +    +SY  D+WS G  L EL T
Sbjct: 167 -------REDGDSPV---FWYAVECLKENKFSYASDVWSFGVTLYELLT 205

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 56.9 bits (137), Expect = 4e-09
 Identities = 60/249 (24%), Positives = 105/249 (42%), Gaps = 52/249 (20%)

Query: 65  TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK 124
           T  ++I+  +G+GT+G+V +  +++     A+K++  I    +    E ++LQ L  +  
Sbjct: 21  TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPN 80

Query: 125 --------GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVD--LVRE 173
                     +   V  + W        +V E   G S+ + +K    C   +D  ++  
Sbjct: 81  VVKFYGMFYKADKLVGGQLW--------LVLELCNGGSVTELVKGLLICGQRLDEAMISY 132

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
                L  + ++H+ R+IH D+K  NILL +                           +K
Sbjct: 133 ILYGALLGLQHLHNNRIIHRDVKGNNILLTT------------------------EGGVK 168

Query: 234 LIDFGSTA---FDNQNHSSIVSTRHYRAPEVIL---GLGWSYP--CDMWSVGCILVELCT 285
           L+DFG +A         ++ V T  + APEVI       +SY   CD+WS+G   +EL  
Sbjct: 169 LVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGD 228

Query: 286 GE-ALFQTH 293
           G+  LF  H
Sbjct: 229 GDPPLFDMH 237

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 57.0 bits (137), Expect = 4e-09
 Identities = 75/331 (22%), Positives = 133/331 (40%), Gaps = 93/331 (28%)

Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVL-----QHLAKNDKGGS 127
           K+GEG+ G V    ++ +  +VA+K++  +RK +   ++  +V+     QH         
Sbjct: 28  KIGEGSTGIVCIAREKHSGRQVAVKMM-DLRKQQRRELLFNEVVIMRDYQHQ-------- 78

Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
            + V++   +     + ++ E L G +L D + + +     +  V E    +L+++ Y+H
Sbjct: 79  -NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQTRLNEEQIATVCE---SVLQALCYLH 134

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA---FD 243
              +IH D+K ++ILL       L G                   +KL DFG  A    D
Sbjct: 135 SQGVIHRDIKSDSILLT------LDG------------------RVKLSDFGFCAQISKD 170

Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
                S+V T ++ APEVI    +    D+WS+G +++E+  GE                
Sbjct: 171 VPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEP--------------- 215

Query: 304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA 363
                               YF             S   ++A+K+L         +  + 
Sbjct: 216 -------------------PYF-------------SDSPVQAMKRLRDSPPPKLKNAHKI 243

Query: 364 RSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
              L D L  +L  +P ER TA++ L+HPF 
Sbjct: 244 SPVLRDFLERMLTREPQERATAQELLDHPFL 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 57.0 bits (138), Expect = 4e-09
 Identities = 58/229 (25%), Positives = 97/229 (42%), Gaps = 41/229 (17%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           + L ++G GT G+V +   ++T   +A+K +R      +   I +D+   L  +D     
Sbjct: 18  ENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHD---CP 74

Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
           + V+   +F   + + I  E +  +  D L +    P P D++   G+  +  V  +H L
Sbjct: 75  YIVKCYGYFITDSDVFICMELMS-TCLDKLLKRIQGPIPEDIL---GKMTVAIVKALHYL 130

Query: 189 R----LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-- 242
           +    +IH D+KP NIL                        L  S  +KL DFG +    
Sbjct: 131 KEKHGVIHRDVKPSNIL------------------------LDASGNVKLCDFGISGRLV 166

Query: 243 DNQNHSSIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILVELCTGE 287
           D++  +       Y APE I        +    D+WS+G  LVEL TG+
Sbjct: 167 DSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQ 215

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 56.4 bits (136), Expect = 5e-09
 Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 40/220 (18%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
              +G G  G V + +   T+  +A+KV+      + +   M E+++L       K  S 
Sbjct: 6   QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILY------KCDSP 59

Query: 129 HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           + +     F   N I I  E + G SL      + Y   P  ++      +++ + Y+  
Sbjct: 60  YIIGFYGAFFVENRISICTEFMDGGSL------DVYRKIPEHVLGRIAVAVVKGLTYLWS 113

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
           L+++H D+KP N+L+             ++ G+           +KL DFG ST   N  
Sbjct: 114 LKILHRDVKPSNMLV-------------NTRGQ-----------VKLCDFGVSTQLVNSI 149

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
             + V T  Y APE I G  +    D+WS+G   +EL  G
Sbjct: 150 AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALG 189

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 56.9 bits (137), Expect = 7e-09
 Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 46/236 (19%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
           Y+++  +G G FG V     + T++  A+K++      K  D+A    E D++       
Sbjct: 45  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 99

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
              S   VQ+   F    ++ +V E + G  L + +        P    R +  +++ ++
Sbjct: 100 -ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLAL 155

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H +  IH D+KP+N+L                        L KS  +KL DFG+   
Sbjct: 156 DAIHSMGFIHRDVKPDNML------------------------LDKSGHLKLADFGTCMK 191

Query: 243 DNQNH----SSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
            N+       + V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 192 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 56.6 bits (136), Expect = 7e-09
 Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 37/224 (16%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
           ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL         
Sbjct: 7   FERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC------ 60

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S + V     F     I I  E + G SL   LK  K    P +++ +    +L  +AY
Sbjct: 61  NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSIAVLRGLAY 118

Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           + +  +++H D+KP NIL+             +S GE           IKL DFG S   
Sbjct: 119 LREKHQIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 154

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
            +   +S V TR Y +PE + G  +S   D+WS+G  LVEL  G
Sbjct: 155 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIG 198

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 56.2 bits (135), Expect = 8e-09
 Identities = 73/339 (21%), Positives = 124/339 (36%), Gaps = 83/339 (24%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKG 125
           Y++L   G+G FG V  C  R T +  A K +  + I+K +  AM     L      +K 
Sbjct: 5   YRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAM----ALNEKRILEKV 57

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP-FPVDLVREFGRQLLESVAY 184
            S   V +   ++ ++ +C+V   +      F   N   P F       +  +L   +  
Sbjct: 58  NSRFVVSLAYAYETKDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLED 117

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +   R+++ DLKPENILL     I++     +         +P+   ++           
Sbjct: 118 LQRERIVYRDLKPENILLDDRGHIRISDLGLAVQ-------IPEGETVR----------- 159

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMER 304
                 V T  Y APEVI    +++  D W +GC++ E+  G++ F+             
Sbjct: 160 ----GRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFR------------- 202

Query: 305 ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR 364
                                +R  R+   E  V R          R+K     + ++  
Sbjct: 203 ---------------------KRKERVKREE--VDR----------RVKEDQEEYSEKFS 229

Query: 365 STLTDLLHGLLRYDPSERLTAR-----QALNHPFFRNLN 398
                +   LL  +P ERL  R         HP F+N+N
Sbjct: 230 EDAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN 268

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 56.2 bits (135), Expect = 8e-09
 Identities = 71/325 (21%), Positives = 131/325 (40%), Gaps = 81/325 (24%)

Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           K+GEG+ G V     + + + VA+K +   ++ R   +    V+    +++     + V+
Sbjct: 27  KIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-----NVVE 81

Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           + N +   + + +V E L G +L D +   +     +  V      +L++++ +H   +I
Sbjct: 82  MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAV---CLAVLKALSVLHAQGVI 138

Query: 192 HTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSS 249
           H D+K ++ILL     +KL   G+    S E+P R                        S
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-----------------------KS 175

Query: 250 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPL 309
           +V T ++ APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P 
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 234

Query: 310 PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD 369
                                                    +LKN+      +   +L  
Sbjct: 235 -----------------------------------------KLKNL-----HKVSPSLKG 248

Query: 370 LLHGLLRYDPSERLTARQALNHPFF 394
            L  LL  DP++R TA + L HPF 
Sbjct: 249 FLDRLLVRDPAQRATAAELLKHPFL 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 56.7 bits (137), Expect = 8e-09
 Identities = 58/236 (24%), Positives = 99/236 (41%), Gaps = 46/236 (19%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
           + ++  +G G FG V     + +++  A+K++      K  D+A    E D++ H     
Sbjct: 45  FDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAH----- 99

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
              S   VQ+   F    ++ +V E + G  L + +  + Y   P    R +  +++ ++
Sbjct: 100 -ANSEWIVQLHYAFQDDKYLYMVMEYMPGGDLVNLM--SNY-DIPEKWARFYTAEVVLAL 155

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H +  IH D+KP+N+LL               SG            +KL DFG+   
Sbjct: 156 DAIHSMGFIHRDVKPDNMLL-------------DKSGH-----------LKLADFGTCMK 191

Query: 243 DNQN---HSSI-VSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
            + N        V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 192 MDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 247

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 56.0 bits (135), Expect = 1e-08
 Identities = 72/337 (21%), Positives = 122/337 (36%), Gaps = 96/337 (28%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS----IRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G+FG+V+    + T E  AIK ++          +  M+E  VL    ++       
Sbjct: 3   LGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLF 62

Query: 130 CVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           C      F  + H+  V E L  G  +F      +   F     R +  +++  + ++H 
Sbjct: 63  CT-----FQTKEHLFFVMEYLNGGDLMFHIQSSGR---FDEARARFYAAEIICGLQFLHK 114

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDN 244
             +I+ DLK +N+LL                         K   IK+ DFG         
Sbjct: 115 KGIIYRDLKLDNVLL------------------------DKDGHIKIADFGMCKENMNGE 150

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLEHLAMM 302
              S+   T  Y APE++ G  ++   D WS G +L E+  G++ F  +  + L    + 
Sbjct: 151 GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN 210

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
           +R                   +F R     W    +S+E+                    
Sbjct: 211 DRP------------------HFPR-----W----ISKEA-------------------- 223

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQAL-NHPFFRNLN 398
                 D L  L   DP++RL     +  HPFFR ++
Sbjct: 224 -----KDCLSKLFERDPTKRLGVDGDIRQHPFFRGID 255

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 56.1 bits (135), Expect = 1e-08
 Identities = 63/236 (26%), Positives = 102/236 (43%), Gaps = 39/236 (16%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV--RSI--RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G+FG+VL    +      A+KV+  ++I  +K ++  M E +VL    KN K     
Sbjct: 3   IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVL---LKNLK--HPF 57

Query: 130 CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V +   F     +  V + + G  LF  L+R + C F     R +  ++  ++ Y+H L
Sbjct: 58  LVGLHYSFQTAEKLYFVLDYVNGGELFFHLQRER-C-FLEPRARFYAAEVASAIGYLHSL 115

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
            +I+ DLKPENILL S   + L  +     G  P                      +  S
Sbjct: 116 NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEP---------------------EETTS 154

Query: 249 SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF------QTHENLEH 298
           +   T  Y APEV+    +    D W +G +L E+  G   F      Q ++N+ H
Sbjct: 155 TFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH 210

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 46/236 (19%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
           Y ++  +G G FG V     + +Q+  A+K++      K  D+A    E D++       
Sbjct: 45  YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 99

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
              S   VQ+   F    ++ +V E + G  L + +        P    + +  +++ ++
Sbjct: 100 -ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVLAL 155

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H + LIH D+KP+N+L                        L K   +KL DFG+   
Sbjct: 156 DAIHSMGLIHRDVKPDNML------------------------LDKHGHLKLADFGTCMK 191

Query: 243 DNQNH----SSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
            ++       + V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 192 MDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 247

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 55.4 bits (133), Expect = 1e-08
 Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 39/249 (15%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++++ ++G GT+G V +  +  T E  AIKV++ +    D A+++ +++  + K+ K   
Sbjct: 11  FELIQRIGSGTYGDVYKARNVNTGELAAIKVIK-LEPGEDFAVVQQEII--MMKDCK--H 65

Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           S+ V     +  R+ + I  E  G  SL D        P     +    R+ L+ + Y+H
Sbjct: 66  SNIVAYFGSYLRRDKLWICMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLH 123

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
               +H D+K  NILL  +      G+                  +KL DFG +A     
Sbjct: 124 SKGKMHRDIKGANILLTDN------GH------------------VKLADFGVSAQITAT 159

Query: 247 ---HSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGE-ALFQTHENLEHL 299
                S + T ++ APEV       G++  CD+W+VG   +EL   +  +F  H      
Sbjct: 160 IAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALF 219

Query: 300 AMMERALGP 308
            M +    P
Sbjct: 220 LMTKSNFQP 228

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 55.0 bits (132), Expect = 1e-08
 Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 39/221 (17%)

Query: 69  KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
            ++ ++G G FG V L  W    + +VAIK +R      + AM E D ++      K   
Sbjct: 7   TLVQEIGSGQFGLVWLGYW--LEKRKVAIKTIR------EGAMSEEDFIEEAQVMMKLSH 58

Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
              VQ+      R+ IC+VFE +    L D+L R +   F  + +      + E +AY+ 
Sbjct: 59  PKLVQLYGVCTERSPICLVFEFMEHGCLSDYL-RAQRGKFSQETLLGMCLDVCEGMAYLE 117

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DN 244
              +IH DL   N L+                GE        +  +K+ DFG T F  D+
Sbjct: 118 SSNVIHRDLAARNCLV----------------GE--------NQVVKVSDFGMTRFVLDD 153

Query: 245 QNHSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVEL 283
           Q  SS  +    +  +PEV     +S   D+WS G ++ E+
Sbjct: 154 QYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEV 194

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 67/257 (26%), Positives = 109/257 (42%), Gaps = 57/257 (22%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKND--- 123
           ++ L  +G G FG V     + T    A+K++R       A M+E + + H+ A+ D   
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRK------ADMLEKEQVAHIRAERDILV 56

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES- 181
           +   +  V++   F  + ++ ++ E L G  +   L +        D + E   Q   + 
Sbjct: 57  EADGAWVVKMFYSFQDKRNLYLIMEFLPGGDMMTLLMKK-------DTLSEEATQFYIAE 109

Query: 182 ----VAYMHDLRLIHTDLKPENILLVSSEFIKLP------GYKRSSSGEMPFRCL---PK 228
               +  +H L  IH D+KP+N+LL +   +KL       G K++   E  +R L   P 
Sbjct: 110 TVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEF-YRNLTHNPP 168

Query: 229 SSAIKLIDFGSTAFDNQNHS---------------SIVSTRHYRAPEVILGLGWSYPCDM 273
           S      DF   +F N N                 S V T  Y APEV +  G++  CD 
Sbjct: 169 S------DF---SFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDW 219

Query: 274 WSVGCILVELCTGEALF 290
           WS+G I+ E+  G   F
Sbjct: 220 WSLGVIMYEMLIGYPPF 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 65/249 (26%), Positives = 108/249 (43%), Gaps = 41/249 (16%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKND--- 123
           ++ L  +G G FG V     + T    A+K++R       A M+E + + H+ A+ D   
Sbjct: 3   FESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRK------ADMLEKEQVGHIRAERDILV 56

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           +  S   V++   F  + ++ ++ E L G  +   L +        +  + +  + + ++
Sbjct: 57  EADSLWVVKMFYSFQDKLNLYLIMEFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAI 114

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLP------GYKRSSSGEMPFRCLPKSSAIKLID 236
             +H L  IH D+KP+N+LL S   +KL       G K++   E  +R L  S      D
Sbjct: 115 DSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEF-YRNLNHSLPS---D 170

Query: 237 FGSTAFDNQNHS---------------SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILV 281
           F    F N N                 S V T  Y APEV +  G++  CD WS+G I+ 
Sbjct: 171 F---TFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMY 227

Query: 282 ELCTGEALF 290
           E+  G   F
Sbjct: 228 EMLIGYPPF 236

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 54.7 bits (132), Expect = 2e-08
 Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 47/227 (20%)

Query: 73  KMGEGTFGRVLEC-WDRQTQER--VAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGS 127
           K+G+G+FG V    W     +   VA+K ++S +     D  + E  ++  L        
Sbjct: 2   KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSL-------- 53

Query: 128 SHCVQIRNWFDYRNH-ICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            H   IR +     H + +V E L P  SL D L+++    F +  + ++  Q+   + Y
Sbjct: 54  DHENLIRLYGVVLTHPLMMVTE-LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRY 112

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +   R IH DL   NILL S + +K+        G M  R LP                 
Sbjct: 113 LESKRFIHRDLAARNILLASDDKVKI-----GDFGLM--RALP----------------- 148

Query: 245 QNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
           QN    V   H +      APE +    +S+  D+W  G  L E+ T
Sbjct: 149 QNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFT 195

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 55/235 (23%), Positives = 96/235 (40%), Gaps = 45/235 (19%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKNDKGGSSH 129
           +G+G+FG+V     + T +  AIK ++      D      M+E  VL    ++      +
Sbjct: 3   LGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLY 62

Query: 130 CVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVRE--FGRQLLESVAYM 185
           C      F  + ++  V E L  G  +F     +K+     DL R   +  +++  + ++
Sbjct: 63  CT-----FQTKENLFFVMEYLNGGDLMFHIQSCHKF-----DLPRATFYAAEIICGLQFL 112

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAF 242
           H   +++ DLK +NILL                             IK+ DFG       
Sbjct: 113 HSKGIVYRDLKLDNILL------------------------DTDGHIKIADFGMCKENML 148

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
            +    +   T  Y APE++LG  ++   D WS G +L E+  G++ F  H+  E
Sbjct: 149 GDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEE 203

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 55.4 bits (133), Expect = 2e-08
 Identities = 82/336 (24%), Positives = 134/336 (39%), Gaps = 45/336 (13%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
           ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL         
Sbjct: 7   FEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC------ 60

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S + V     F     I I  E + G SL   LK  K    P  ++ +    +++ + Y
Sbjct: 61  NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSIAVIKGLTY 118

Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           + +  +++H D+KP NIL+             +S GE           IKL DFG S   
Sbjct: 119 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 154

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
            +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G       +  E   M 
Sbjct: 155 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMF 214

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM--VSLHV 360
              +   P      A   T    R   R     G  SR  +   + LD + N     L  
Sbjct: 215 GCPVEGDP------AESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPS 268

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
               +   D ++  L  +P+ER   +Q + H F + 
Sbjct: 269 GVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 304

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 55.1 bits (132), Expect = 2e-08
 Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 41/221 (18%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRKYRDAAMIEIDVLQHLAKNDKG 125
           L ++G G+FG V    D +  E VAIK +     +S  K++D  + E+  LQ L      
Sbjct: 20  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQKLRH---- 74

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
              + +Q R  +   +   +V E    S  D L+ +K  P     +       L+ +AY+
Sbjct: 75  --PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYL 131

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H   +IH D+K  NILL        PG                   +KL DFGS +    
Sbjct: 132 HSHNMIHRDVKAGNILLSE------PG------------------LVKLGDFGSASIMAP 167

Query: 246 NHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVEL 283
             +  V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 168 A-NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 55.7 bits (134), Expect = 2e-08
 Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 42/206 (20%)

Query: 144 CIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQLLESVAYMHDLRLIHTDLKPENIL 201
           C+V  K    L+ +L        P+ L  V    RQLL ++ Y+H   +IH D+K EN+L
Sbjct: 236 CLVLPKYRSDLYTYLGAR---LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVL 292

Query: 202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSS-----IVSTRHY 256
           +   E I                CL         DFG+  F   + S+     I  T   
Sbjct: 293 VNGPEDI----------------CLG--------DFGAACFARGSWSTPFHYGIAGTVDT 328

Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCTGEA-LFQTHENLEH-------LAMMERALGP 308
            APEV+ G  ++   D+WS G ++ E     A LF      E        L ++ +A   
Sbjct: 329 NAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVH 388

Query: 309 LPEHMIRRASRGTEKYFRRGSRLNWP 334
           + E      SR   +Y  R +R   P
Sbjct: 389 VDEFPQHAGSRLVSQYRHRAARNRRP 414

Length = 461

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 41/221 (18%)

Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRKYRDAAMIEIDVLQHLAKNDKG 125
           L ++G G+FG V    +  T E VA+K +     ++  K++D  + E+  LQ L      
Sbjct: 26  LHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDI-IKEVKFLQQLKH---- 80

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
              + ++ +  +   +   +V E    S  D L+ +K  P     +       L+ +AY+
Sbjct: 81  --PNTIEYKGCYLKEHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAITHGALQGLAYL 137

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H   +IH D+K  NILL        PG                   +KL DFGS +  + 
Sbjct: 138 HSHNMIHRDIKAGNILLTE------PG------------------QVKLADFGSASKSSP 173

Query: 246 NHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVEL 283
             +S V T ++ APEVIL +    +    D+WS+G   +EL
Sbjct: 174 A-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 213

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 54.4 bits (131), Expect = 3e-08
 Identities = 56/240 (23%), Positives = 95/240 (39%), Gaps = 46/240 (19%)

Query: 68  YKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHL 119
           +++L  +G G +G+V    +       +  A+KV++        K  +    E  VL+ +
Sbjct: 2   FELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAV 61

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                      V +   F     + ++ + + G  LF  L + ++  F    VR +  ++
Sbjct: 62  R-----RCPFLVTLHYAFQTDTKLHLILDYVNGGELFTHLYQREH--FTESEVRVYIAEI 114

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + ++ ++H L +I+ D+K ENIL                        L     + L DFG
Sbjct: 115 VLALDHLHQLGIIYRDIKLENIL------------------------LDSEGHVVLTDFG 150

Query: 239 -STAFDNQNHS---SIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALFQT 292
            S  F  +      S   T  Y APEVI G   G     D WS+G +  EL TG + F  
Sbjct: 151 LSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTV 210

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 54.7 bits (131), Expect = 3e-08
 Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 37/240 (15%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
           ++IL  +G G FG V     +   +  A+K++      + A       E DVL +     
Sbjct: 3   FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----- 57

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            G +     +   F   N++ +V +  +G  L   L + +    P D+ R +  +++ ++
Sbjct: 58  -GDNQWITTLHYAFQDENNLYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYLAEMVIAI 115

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H L  +H D+KP+NIL+  +  I+L  +                S +KL++ G+   
Sbjct: 116 DSVHQLHYVHRDIKPDNILMDMNGHIRLADF---------------GSCLKLMEDGTV-- 158

Query: 243 DNQNHSSIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILVELCTGEALFQTHENLE 297
                S  V T  Y +PE++     G G   P CD WS+G  + E+  GE  F     +E
Sbjct: 159 ---QSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 215

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 53.5 bits (128), Expect = 4e-08
 Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 42/225 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           Y+++ ++G GT+G V +  +  T E  A+K+++ +    D ++I+ ++   + K  K   
Sbjct: 11  YELIQRVGSGTYGDVYKARNLHTGELAAVKIIK-LEPGDDFSLIQQEIF--MVKECK--- 64

Query: 128 SHCVQIRNWFDY--RNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            HC  +  +  Y  R  + I  E  G  SL D        P     +    R+ L+ +AY
Sbjct: 65  -HCNIVAYFGSYLSREKLWICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAY 121

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--- 241
           +H    +H D+K  NILL             + +G+           +KL DFG  A   
Sbjct: 122 LHSKGKMHRDIKGANILL-------------TDNGD-----------VKLADFGVAAKIT 157

Query: 242 FDNQNHSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVEL 283
                  S + T ++ APEV       G++  CD+W+VG   +EL
Sbjct: 158 ATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 53.4 bits (128), Expect = 6e-08
 Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 53/236 (22%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA----AMIEIDVLQHLAKNDKGGSSH 129
           +G+G FG V     + T +  A K +   R  + +    A++E ++L+      K  S  
Sbjct: 1   LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILE------KVNSPF 54

Query: 130 CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPV-----DLVR--EFGRQLLES 181
            V +   F+ + H+C+V   + G  L       KY  + V     ++ R   +  Q+   
Sbjct: 55  IVNLAYAFESKTHLCLVMSLMNGGDL-------KYHIYNVGERGLEMERVIHYSAQITCG 107

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG---EMPFRCLPKSSAIKLIDFG 238
           + ++H + +++ D+KPEN+LL      +L     S  G   E+                 
Sbjct: 108 ILHLHSMDIVYRDMKPENVLLDDQGNCRL-----SDLGLAVELK---------------- 146

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
               D +  +    T  Y APE++    +SYP D +++GC + E+  G   F+ H+
Sbjct: 147 ----DGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHK 198

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 52.9 bits (128), Expect = 7e-08
 Identities = 50/235 (21%), Positives = 93/235 (39%), Gaps = 56/235 (23%)

Query: 73  KMGEGTFGRVLEC-WDRQTQE--RVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGS 127
           K+GEG FG V +     +  +   VA+K ++     + R   + E  V++ L      G 
Sbjct: 2   KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKL------GH 55

Query: 128 SHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPV---------DLVREFGR 176
            + V++         + +V E  + G  L D+L++++   FP          DL+  F  
Sbjct: 56  PNVVRLLGVCTEEEPLYLVLEYMEGG-DLLDYLRKSR-PVFPSPEKSTLSLKDLLS-FAI 112

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+ + + Y+   + +H DL   N L V  + +                       +K+ D
Sbjct: 113 QIAKGMEYLASKKFVHRDLAARNCL-VGEDLV-----------------------VKISD 148

Query: 237 FG------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           FG         +  +     +  R + APE +    ++   D+WS G +L E+ T
Sbjct: 149 FGLSRDVYDDDYYRKKTGGKLPIR-WMAPESLKDGIFTSKSDVWSFGVLLWEIFT 202

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 52.8 bits (127), Expect = 7e-08
 Identities = 58/236 (24%), Positives = 97/236 (41%), Gaps = 44/236 (18%)

Query: 71  LSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           L ++G G FG V L  W  + +  VAIK++R      + AM E D ++      K    +
Sbjct: 9   LKELGSGQFGVVHLGKW--RGKIDVAIKMIR------EGAMSEDDFIEEAKVMMKLSHPN 60

Query: 130 CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
            VQ+      +  I IV E    G  L ++L+  K      + + +    + E++ Y+  
Sbjct: 61  LVQLYGVCTKQRPIFIVTEYMANG-CLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLES 118

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQ 245
              IH DL   N L V  + +                       +K+ DFG   +  D+Q
Sbjct: 119 NGFIHRDLAARNCL-VGEDNV-----------------------VKVSDFGLARYVLDDQ 154

Query: 246 NHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
             SS   T+    +  PEV     +S   D+WS G ++ E+ + G+  ++   N E
Sbjct: 155 YTSS-QGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE 209

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 53.3 bits (128), Expect = 7e-08
 Identities = 76/334 (22%), Positives = 139/334 (41%), Gaps = 76/334 (22%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH--CV 131
           +G G++ +VL    ++T+   A+KV++      D    +ID +Q      +  S+H   V
Sbjct: 3   IGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDE---DIDWVQTEKHVFETASNHPFLV 59

Query: 132 QIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
            + + F   + +  V E + G  L   ++R +    P +  R +  ++  ++ ++H+  +
Sbjct: 60  GLHSCFQTESRLFFVIEFVSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERGI 117

Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSI 250
           I+ DLK +N+LL +   IKL  Y     G  P               G T       S+ 
Sbjct: 118 IYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRP---------------GDTT------STF 156

Query: 251 VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLP 310
             T +Y APE++ G  + +  D W++G ++ E+  G + F      ++           P
Sbjct: 157 CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDN-----------P 205

Query: 311 EHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
           +       + TE Y  +                  ++K  R+   +S+   +A S    +
Sbjct: 206 D-------QNTEDYLFQ----------------VILEKQIRIPRSLSV---KASS----V 235

Query: 371 LHGLLRYDPSERLTA------RQALNHPFFRNLN 398
           L G L  DP ERL        R   +HPFFRN++
Sbjct: 236 LKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNID 269

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 52.7 bits (126), Expect = 1e-07
 Identities = 43/155 (27%), Positives = 67/155 (43%), Gaps = 34/155 (21%)

Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP------GYKRSSSG 219
           FP  L R +  +L  ++  +H +  IH D+KP+NIL+     IKL       G++ + + 
Sbjct: 98  FPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157

Query: 220 EMPFRCLPKSSAIKLIDFGSTAF-------------------DNQNHS-----SIVSTRH 255
           +       K S I+      +                       + H      S+V T +
Sbjct: 158 KY----YQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPN 213

Query: 256 YRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           Y APEV+L  G++  CD WSVG IL E+  G+  F
Sbjct: 214 YIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPF 248

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 51.7 bits (124), Expect = 2e-07
 Identities = 57/237 (24%), Positives = 99/237 (41%), Gaps = 45/237 (18%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
           ++IL  +G G FG V     + T +  A+K++      + A       E DVL +     
Sbjct: 3   FEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVN----- 57

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            G       +   F   N++ +V +  +G  L   L + +    P D+ R +  +++ ++
Sbjct: 58  -GDRRWITNLHYAFQDENNLYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYLAEMVLAI 115

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST-- 240
             +H L  +H D+KP+N+L                        L K+  I+L DFGS   
Sbjct: 116 DSVHQLGYVHRDIKPDNVL------------------------LDKNGHIRLADFGSCLR 151

Query: 241 -AFDNQNHSSI-VSTRHYRAPEVILGLG-----WSYPCDMWSVGCILVELCTGEALF 290
              D    S++ V T  Y +PE++  +      +   CD WS+G  + E+  GE  F
Sbjct: 152 LLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPF 208

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 38/243 (15%)

Query: 69  KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           K+  K+G G FG V +  +++ T  +VA+K ++      +A + E +V++ L ++DK   
Sbjct: 9   KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVK 65

Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
            H V  +       +I   F   G SL DFLK ++    P+  + +F  Q+ E +A++  
Sbjct: 66  LHAVVTKEPI----YIITEFMAKG-SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ 120

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
              IH DL+  NIL                        +  S   K+ DFG       N 
Sbjct: 121 RNYIHRDLRAANIL------------------------VSASLVCKIADFGLARVIEDNE 156

Query: 248 SSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
            +      +     APE I    ++   D+WS G +L+E+ T G   +    N E +  +
Sbjct: 157 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRAL 216

Query: 303 ERA 305
           ER 
Sbjct: 217 ERG 219

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 51.2 bits (122), Expect = 3e-07
 Identities = 74/355 (20%), Positives = 135/355 (38%), Gaps = 105/355 (29%)

Query: 68  YKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVRS---IRKYRDA--AMIEIDVLQHL 119
           +++L  +G G +G+V    +     + +  A+KV++    ++K +       E  VL+H+
Sbjct: 2   FELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 61

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
            +     S   V +   F     + ++ + + G  LF  L + +   F    V+ +  ++
Sbjct: 62  RQ-----SPFLVTLHYAFQTDTKLHLILDYINGGELFTHLSQRER--FKEQEVQIYSGEI 114

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + ++ ++H L +I+ D+K ENILL              S+G            + L DFG
Sbjct: 115 VLALEHLHKLGIIYRDIKLENILL-------------DSNGH-----------VVLTDFG 150

Query: 239 ST----AFDNQNHSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALFQT 292
            +      + +   S   T  Y AP+++ G   G     D WS+G ++ EL TG + F  
Sbjct: 151 LSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTV 210

Query: 293 H-ENLEHLAMMERALG---PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
             E      +  R L    P P+ M                       A+++        
Sbjct: 211 DGEKNSQAEISRRILKSEPPYPQEM----------------------SALAK-------- 240

Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                               D++  LL  DP +RL      A +   HPFF+ +N
Sbjct: 241 --------------------DIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN 275

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 50.4 bits (120), Expect = 5e-07
 Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 28/224 (12%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           +G G FG V  C    T +  A+K +   R K +    + ++    L+    G     V 
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +   F   + +C + + + G  L   L  +++  F    +R +  +++  + +MH+  ++
Sbjct: 62  MTYAFHTPDKLCFILDLMNGGDLHYHL--SQHGVFSEKEMRFYATEIILGLEHMHNRFVV 119

Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIV 251
           + DLKP NILL         G+ R S  ++   C          DF       + H+S V
Sbjct: 120 YRDLKPANILLDEH------GHVRIS--DLGLAC----------DFSK----KKPHAS-V 156

Query: 252 STRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
            T  Y APEV+  G  +    D +S+GC+L +L  G + F+ H+
Sbjct: 157 GTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHK 200

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

 Score = 50.0 bits (119), Expect = 6e-07
 Identities = 65/248 (26%), Positives = 101/248 (40%), Gaps = 48/248 (19%)

Query: 69  KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           +++ K+G G FG V +  W+  T  +VA+K ++      ++ + E  +++ L ++DK   
Sbjct: 9   QLIKKLGNGQFGEVWMGTWNGNT--KVAVKTLKPGTMSPESFLEEAQIMKKL-RHDK--- 62

Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLK----RNKYCPFPVDLVREFGRQLLESV 182
              VQ+         I IV E +   SL DFLK    R    P  VD+      Q+   +
Sbjct: 63  --LVQLYAVVS-EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDM----AAQVAAGM 115

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
           AY+  +  IH DL+  NIL V    +                        K+ DFG    
Sbjct: 116 AYIERMNYIHRDLRSANIL-VGDGLV-----------------------CKIADFGLARL 151

Query: 243 DNQNHSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
              N  +      +     APE  L   ++   D+WS G +L EL T G   +    N E
Sbjct: 152 IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE 211

Query: 298 HLAMMERA 305
            L  +ER 
Sbjct: 212 VLEQVERG 219

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 50.6 bits (121), Expect = 6e-07
 Identities = 58/239 (24%), Positives = 100/239 (41%), Gaps = 49/239 (20%)

Query: 71  LSKMGEGTFGRVLECWDRQTQER-----VAIKVVRS---IRKYRDAAMI--EIDVLQHLA 120
           L  +G+G +G+V +   R+          A+KV++    +R  +D A    E ++L+ + 
Sbjct: 1   LKVLGKGGYGKVFQV--RKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK 58

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                     V +   F     + ++ E L G  LF  L+R     F  D    +  ++ 
Sbjct: 59  ------HPFIVDLIYAFQTGGKLYLILEYLSGGELFMHLEREGI--FMEDTACFYLSEIS 110

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
            ++ ++H   +I+ DLKPENILL              + G            +KL DFG 
Sbjct: 111 LALEHLHQQGIIYRDLKPENILL-------------DAQGH-----------VKLTDFGL 146

Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
              +  +     +   T  Y APE+++  G     D WS+G ++ ++ TG   F T EN
Sbjct: 147 CKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPF-TAEN 204

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 49.9 bits (119), Expect = 7e-07
 Identities = 61/241 (25%), Positives = 100/241 (41%), Gaps = 40/241 (16%)

Query: 71  LSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           + ++G G FG V L  W  + Q +VAIK +       + AM E D ++      K     
Sbjct: 9   MKELGSGQFGVVHLGKW--RAQIKVAIKAIN------EGAMSEEDFIEEAKVMMKLSHPK 60

Query: 130 CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            VQ+      +  + IV E +    L ++L R +      D++    + + E + Y+   
Sbjct: 61  LVQLYGVCTQQKPLYIVTEFMENGCLLNYL-RQRQGKLSKDMLLSMCQDVCEGMEYLERN 119

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
             IH DL   N  LVSS  +                       +K+ DFG T +  D++ 
Sbjct: 120 SFIHRDLAARNC-LVSSTGV-----------------------VKVSDFGMTRYVLDDEY 155

Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
            SS  +     +  PEV     +S   D+WS G ++ E+ T G+  F+   N E + M+ 
Sbjct: 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMIS 215

Query: 304 R 304
           R
Sbjct: 216 R 216

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 49.7 bits (118), Expect = 8e-07
 Identities = 69/249 (27%), Positives = 104/249 (41%), Gaps = 45/249 (18%)

Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  +VAIK ++      +A + E  +++ L ++DK    + V
Sbjct: 13  KLGQGCFGEVWMGTWNGTT--KVAIKTLKPGTMMPEAFLQEAQIMKKL-RHDKLVPLYAV 69

Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +G  SL DFLK    KY   P  LV +   Q+ + +AY+  +
Sbjct: 70  V------SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLP-QLV-DMAAQIADGMAYIERM 121

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             IH DL+  NIL+                          +   K+ DFG       N  
Sbjct: 122 NYIHRDLRAANILVG------------------------DNLVCKIADFGLARLIEDNEY 157

Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVE 217

Query: 304 RALG-PLPE 311
           R    P P+
Sbjct: 218 RGYRMPCPQ 226

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 49.7 bits (119), Expect = 1e-06
 Identities = 70/343 (20%), Positives = 125/343 (36%), Gaps = 91/343 (26%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS----IRKYRDAAMIEIDVLQHLAKND 123
           ++ L+ +G G FG+VL    ++T E  AIK ++      R   ++ M E  +      N 
Sbjct: 1   FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIF--ETANS 58

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           +    H   V +   F   +H+C V E   G  L   +  +    F       +   ++ 
Sbjct: 59  ER---HPFLVNLFACFQTEDHVCFVMEYAAGGDLMMHIHTDV---FSEPRAVFYAACVVL 112

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            + Y+H+ ++++ DLK +N+LL +  F+K+  +     G               + FG  
Sbjct: 113 GLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEG---------------MGFGDR 157

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                  S+   T  + APEV+    ++   D W +G ++ E+  GE+ F   +  E   
Sbjct: 158 T------STFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFD 211

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            +       P  +                         SRE+I  +++            
Sbjct: 212 SIVNDEVRYPRFL-------------------------SREAISIMRR------------ 234

Query: 361 DRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                        LLR +P  RL      A      PFFR++N
Sbjct: 235 -------------LLRRNPERRLGSGEKDAEDVKKQPFFRDIN 264

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 76/338 (22%), Positives = 126/338 (37%), Gaps = 87/338 (25%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G FG V  C  R T +  A K +   R    K  + AM+E  +L       K  S  
Sbjct: 1   LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILA------KVHSRF 54

Query: 130 CVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCP-FPVDLVREFGRQLLESVAYMH 186
            V +   F  +  +C+V   +  G   +     ++  P FP      +  Q++  + ++H
Sbjct: 55  IVSLAYAFQTKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH 114

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
             R+I+ DLKPEN+LL +   +++     S  G           A++L        D Q+
Sbjct: 115 QRRIIYRDLKPENVLLDNDGNVRI-----SDLG----------LAVELK-------DGQS 152

Query: 247 HS-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
            +     T  + APE++ G  + +  D +++G  L E                   M  A
Sbjct: 153 KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYE-------------------MIAA 193

Query: 306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS 365
            GP               +  RG ++            K +K+  R+ N    + D+   
Sbjct: 194 RGP---------------FRARGEKV----------ENKELKQ--RILNDSVTYPDKFSP 226

Query: 366 TLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                   LL  DP +RL            HP FR+LN
Sbjct: 227 ASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDLN 264

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 50.1 bits (119), Expect = 1e-06
 Identities = 60/252 (23%), Positives = 97/252 (38%), Gaps = 62/252 (24%)

Query: 67  RYKILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
            ++++  +  G FG++  C     T+E  A + V S  + +          + +AK  K 
Sbjct: 149 HFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCE------RLIAKRVKA 202

Query: 126 GSSHCVQIRN---WFDYRNH--ICIVFEKLGPSLFDFLKRNKYCPFPVDL---------- 170
           GS   +Q+ N        NH  I  + E L      ++   KY     DL          
Sbjct: 203 GSRAAIQLENEILALGRLNHENILKIEEILRSEANTYMITQKY---DFDLYSFMYDEAFD 259

Query: 171 ---------VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM 221
                     R   +QLL +V Y+HD +LIH D+K ENI L                   
Sbjct: 260 WKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD---------------- 303

Query: 222 PFRCLPKSSAIKLIDFGS-TAFDNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVG 277
                     I L DFG+   F+ +  +     V T    +PE++ G G+    D+WS G
Sbjct: 304 --------GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCG 355

Query: 278 CILVELCTGEAL 289
            IL+++ + +  
Sbjct: 356 LILLDMLSHDFC 367

Length = 501

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 49.0 bits (117), Expect = 1e-06
 Identities = 58/244 (23%), Positives = 94/244 (38%), Gaps = 41/244 (16%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++L K+G G FG V E  W+  T   VA+K ++         M   D L       K   
Sbjct: 9   QLLRKLGAGQFGEVWEGLWNNTTP--VAVKTLKP------GTMDPKDFLAEAQIMKKLRH 60

Query: 128 SHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
              +Q+         I IV E  K G SL ++L+        +  + +   Q+   +AY+
Sbjct: 61  PKLIQLYAVCTLEEPIYIVTELMKYG-SLLEYLQGGAGRALKLPQLIDMAAQVASGMAYL 119

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDN 244
                IH DL   N+L+                GE        ++  K+ DFG +     
Sbjct: 120 EAQNYIHRDLAARNVLV----------------GE--------NNICKVADFGLARVIKE 155

Query: 245 QNHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLA 300
             + +    +    + APE  L   +S   D+WS G +L E+ T G   +    N E L 
Sbjct: 156 DIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQ 215

Query: 301 MMER 304
            +++
Sbjct: 216 QVDQ 219

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src

 Score = 48.5 bits (115), Expect = 2e-06
 Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 44/242 (18%)

Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K      V
Sbjct: 13  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK-----LV 64

Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
           Q+         I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 65  QLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 121

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 122 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 157

Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 158 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 217

Query: 304 RA 305
           R 
Sbjct: 218 RG 219

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 51/224 (22%), Positives = 94/224 (41%), Gaps = 35/224 (15%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKNDKGGSSH 129
           +G+G+FG+V+    + T E  AIKV++     +D      M E  +L   AK+    + H
Sbjct: 3   LGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALH 62

Query: 130 CVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           C      F  ++ +  V E +  G  +F   +  K   F     R +  ++  ++ ++H 
Sbjct: 63  CC-----FQTKDRLFFVMEYVNGGDLMFQIQRSRK---FDEPRSRFYAAEVTLALMFLHR 114

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
             +I+ DLK +NILL +    KL  +     G +                          
Sbjct: 115 HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILN---------------------GVTT 153

Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
           ++   T  Y APE++  L +    D W++G ++ E+  G+  F+
Sbjct: 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFE 197

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases

 Score = 48.5 bits (116), Expect = 2e-06
 Identities = 66/245 (26%), Positives = 104/245 (42%), Gaps = 43/245 (17%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           K+  K+G G FG V    W+  T  +VA+K ++      +A + E  +++ L ++DK   
Sbjct: 9   KLERKLGAGQFGEVWMGTWNGTT--KVAVKTLKPGTMSPEAFLQEAQIMKKL-RHDK--- 62

Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRN--KYCPFPVDLVREFGRQLLESVAY 184
              VQ+         I IV E +   SL DFLK    K    P  LV +   Q+ E +AY
Sbjct: 63  --LVQLYAVCSEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLP-QLV-DMAAQIAEGMAY 118

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
           +     IH DL   NIL+                GE        +   K+ DFG +   +
Sbjct: 119 LESRNYIHRDLAARNILV----------------GE--------NLVCKIADFGLARLIE 154

Query: 244 NQNHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL 299
           +  +++    +    + APE      ++   D+WS G +L E+ T G   +    N E L
Sbjct: 155 DDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVL 214

Query: 300 AMMER 304
             +ER
Sbjct: 215 EQVER 219

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 47/262 (17%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
           +  L  +G+G+FG+V+    + T E  AIK+++     +D      M+E  VL    K  
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK-- 59

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYC-PFPVDLVREFGRQLLE 180
                   Q+ + F   + +  V E +  G  ++   +  K+  P  V    E    L  
Sbjct: 60  ---PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLF- 115

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
              ++H   +I+ DLK +N++L              + G            IK+ DFG  
Sbjct: 116 ---FLHSKGIIYRDLKLDNVML-------------DAEGH-----------IKIADFGMC 148

Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
               F  +   +   T  Y APE+I    +    D W+ G +L E+  G+  F   E+ +
Sbjct: 149 KENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDG-EDED 207

Query: 298 HL--AMMERALGPLPEHMIRRA 317
            L  ++ME  +   P+ + + A
Sbjct: 208 ELFQSIMEHNVS-YPKSLSKEA 228

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 48.0 bits (114), Expect = 3e-06
 Identities = 76/334 (22%), Positives = 134/334 (40%), Gaps = 82/334 (24%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           +G G FG V  C    T +  A+K +   R K +    + ++    L+    G     V 
Sbjct: 2   IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 61

Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +   F   + +  + + + G  L   L  +++  F    +R +  +++  + +MH+  ++
Sbjct: 62  MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEAEMRFYAAEIILGLEHMHNRFVV 119

Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIV 251
           + DLKP NILL   E     G+ R S  ++   C          DF       + H+S V
Sbjct: 120 YRDLKPANILL--DEH----GHVRIS--DLGLAC----------DFSK----KKPHAS-V 156

Query: 252 STRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLP 310
            T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+                
Sbjct: 157 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT--------------- 201

Query: 311 EHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST-LTD 369
                                            K   ++DR+   +++ +  + S  L  
Sbjct: 202 ---------------------------------KDKHEIDRMTLTMAVELPDSFSPELRS 228

Query: 370 LLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
           LL GLL+ D + RL      A++   HPFFR+L+
Sbjct: 229 LLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD 262

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 47.8 bits (114), Expect = 4e-06
 Identities = 55/231 (23%), Positives = 99/231 (42%), Gaps = 46/231 (19%)

Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGG 126
           ++ ++G G +G V +     T   +A+K +R+    ++ +   M ++D+           
Sbjct: 5   VIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLM-DLDISMR-------- 55

Query: 127 SSHCVQIRNWFD--YRN-HICIVFEKLGPSLFDFLKRNKYCP---FPVDLVREFGRQLLE 180
           S  C     ++   +R   + I  E +  SL  F K   Y      P D++ +    +++
Sbjct: 56  SVDCPYTVTFYGALFREGDVWICMEVMDTSLDKFYK-KVYDKGLTIPEDILGKIAVSIVK 114

Query: 181 SVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           ++ Y+H  L +IH D+KP N+L+  +  +KL  +    SG +        S  K ID G 
Sbjct: 115 ALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDF--GISGYL------VDSVAKTIDAGC 166

Query: 240 TAFDNQNHSSIVSTRHYRAPEVILG----LGWSYPCDMWSVGCILVELCTG 286
                         + Y APE I       G+    D+WS+G  ++EL TG
Sbjct: 167 --------------KPYMAPERINPELNQKGYDVKSDVWSLGITMIELATG 203

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 48.3 bits (115), Expect = 4e-06
 Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 26/138 (18%)

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L +V ++H   +IH D+K  NILL S+  +KL        G+  F  +   +A    D
Sbjct: 151 QVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKL--------GDFGFSKM--YAATVSDD 200

Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
            G T            T +Y APE+     +S   DM+S+G +L EL T +  F   EN+
Sbjct: 201 VGRT---------FCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDG-ENM 250

Query: 297 EHLAMMERALG----PLP 310
           E +  M + L     PLP
Sbjct: 251 EEV--MHKTLAGRYDPLP 266

Length = 496

>gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn

 Score = 47.3 bits (112), Expect = 4e-06
 Identities = 56/243 (23%), Positives = 107/243 (44%), Gaps = 37/243 (15%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ K+G G FG V   +      +VA+K ++       A + E ++++ L ++DK    
Sbjct: 9   KLVKKLGAGQFGEVWMGY-YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRL 66

Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           + V  +        I I+ E +   SL DFLK ++     +  + +F  Q+ E +AY+  
Sbjct: 67  YAVVTKE-----EPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 121

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
              IH DL+  N+L+  S                   C       K+ DFG +   ++  
Sbjct: 122 KNYIHRDLRAANVLVSES-----------------LMC-------KIADFGLARVIEDNE 157

Query: 247 HSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
           +++    +    + APE I    ++   D+WS G +L E+ T G+  +    N + ++ +
Sbjct: 158 YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL 217

Query: 303 ERA 305
           +R 
Sbjct: 218 QRG 220

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 47.6 bits (113), Expect = 5e-06
 Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 42/235 (17%)

Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKNDKGGSSH 129
           +G+G+FG+V+    +++    A+KV++     +D      M E  +L  LA+N       
Sbjct: 3   LGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILS-LARN----HPF 57

Query: 130 CVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
             Q+   F   + +  V E +  G  +F   K  +   F     R +  ++  ++ ++HD
Sbjct: 58  LTQLYCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR---FDEARARFYAAEITSALMFLHD 114

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDN 244
             +I+ DLK +N+LL                              KL DFG      F+ 
Sbjct: 115 KGIIYRDLKLDNVLL------------------------DHEGHCKLADFGMCKEGIFNG 150

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
           +  S+   T  Y APE++  + +    D W++G +L E+  G A F+  EN + L
Sbjct: 151 KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEA-ENEDDL 204

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 47.1 bits (112), Expect = 8e-06
 Identities = 55/225 (24%), Positives = 96/225 (42%), Gaps = 46/225 (20%)

Query: 74  MGEGTFGRVLECW-----DRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGG 126
           +G G FG+V+E             +VA+K+++       R+A M E+ ++ HL     G 
Sbjct: 43  LGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHL-----GN 97

Query: 127 SSHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
             + V +         I ++ E    G  L +FL+R +     ++ +  F  Q+ + +A+
Sbjct: 98  HENIVNLLGACTIGGPILVITEYCCYG-DLLNFLRRKRESFLTLEDLLSFSYQVAKGMAF 156

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +     IH DL   N+LL              + G++          +K+ DFG  A D 
Sbjct: 157 LASKNCIHRDLAARNVLL--------------THGKI----------VKICDFG-LARDI 191

Query: 245 QNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
            N S+ V   + R      APE I    +++  D+WS G +L E+
Sbjct: 192 MNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEI 236

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 59/248 (23%), Positives = 105/248 (42%), Gaps = 41/248 (16%)

Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
            L ++G G FG V++    + Q  VAIK+++      + +M E + ++      K     
Sbjct: 8   FLKELGTGQFG-VVKYGKWRGQYDVAIKMIK------EGSMSEDEFIEEAKVMMKLSHEK 60

Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            VQ+      +  I IV E +    L ++L+ +     P  L+ E  + + E +AY+   
Sbjct: 61  LVQLYGVCTKQRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLL-EMCKDVCEGMAYLESK 119

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
           + IH DL   N L V  +                         +K+ DFG + +  D++ 
Sbjct: 120 QFIHRDLAARNCL-VDDQGC-----------------------VKVSDFGLSRYVLDDEY 155

Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCT-GEA---LFQTHENLEHLA 300
            SS+ S    R   PEV+L   +S   D+W+ G ++ E+ + G+     F   E +E ++
Sbjct: 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVS 215

Query: 301 MMERALGP 308
              R   P
Sbjct: 216 QGLRLYRP 223

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 46.1 bits (109), Expect = 1e-05
 Identities = 61/261 (23%), Positives = 106/261 (40%), Gaps = 45/261 (17%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
           +  L  +G+G+FG+V+    + T E  AIK+++     +D      M+E  VL       
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLAL----- 56

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYC-PFPVDLVREFGRQLLE 180
            G      Q+ + F   + +  V E +  G  ++   +  ++  P  V    E    L  
Sbjct: 57  SGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLF- 115

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
              ++H   +I+ DLK +N++L              S G            IK+ DFG  
Sbjct: 116 ---FLHSKGIIYRDLKLDNVML-------------DSEGH-----------IKIADFGMC 148

Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
               +D     +   T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E
Sbjct: 149 KENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 208

Query: 298 HL-AMMERALGPLPEHMIRRA 317
              ++ME  +   P+ M + A
Sbjct: 209 LFQSIMEHNVA-YPKSMSKEA 228

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 46.0 bits (109), Expect = 1e-05
 Identities = 58/247 (23%), Positives = 105/247 (42%), Gaps = 40/247 (16%)

Query: 66  PR--YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKND 123
           PR   K++ K+G G FG V   +      +VAIK ++      +A + E ++++ L ++ 
Sbjct: 4   PRETLKLVKKLGAGQFGEVWMGYYNGHT-KVAIKSLKQGSMSPEAFLAEANLMKQL-QHP 61

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           +    + V  +        I I+ E +   SL DFLK  +     ++ + +   Q+ E +
Sbjct: 62  RLVRLYAVVTQE------PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGM 115

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           A++     IH DL+  NI LVS                            K+ DFG +  
Sbjct: 116 AFIERKNYIHRDLRAANI-LVSETL-----------------------CCKIADFGLARL 151

Query: 242 FDNQNHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
            ++  +++    +    + APE I    ++   D+WS G +L E+ T G   +    N E
Sbjct: 152 IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE 211

Query: 298 HLAMMER 304
            +  +ER
Sbjct: 212 VIQNLER 218

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 46.5 bits (110), Expect = 2e-05
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 19/109 (17%)

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q++ ++  +H  +++H DLK  NI L+ +  IKL  +  S            S ++ L D
Sbjct: 177 QIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQ---------YSDSVSL-D 226

Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
             S         S   T +Y APE+     +S   DMWS+G IL EL T
Sbjct: 227 VAS---------SFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLT 266

Length = 478

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 61/235 (25%), Positives = 99/235 (42%), Gaps = 53/235 (22%)

Query: 69  KILSKMGEGTFGRV-LECWD---RQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K + ++G+G FG V L  +D     T E VA+K ++ S  ++      EI++L+ L    
Sbjct: 7   KFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSL---- 62

Query: 124 KGGSSHCVQIRNW--FDY---RNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGR 176
                    I  +    Y   R ++ +V E L P  SL D+L++++       L+  +  
Sbjct: 63  -----QHDNIVKYKGVCYSAGRRNLRLVMEYL-PYGSLRDYLQKHRERLDHRKLL-LYAS 115

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+ + + Y+   R +H DL   NI LV SE                       + +K+ D
Sbjct: 116 QICKGMEYLGSKRYVHRDLATRNI-LVESE-----------------------NRVKIGD 151

Query: 237 FGSTAFDNQNHSSIV------STRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           FG T    Q+           S   + APE +    +S   D+WS G +L EL T
Sbjct: 152 FGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 43.5 bits (103), Expect = 8e-05
 Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 39/219 (17%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDV---LQHLAKNDKG 125
           K+ + +G+G FG V+    R   ++VA+K ++       A + E  V   L+H       
Sbjct: 9   KLGATIGKGEFGDVMLGDYRG--QKVAVKCLKDDSTAAQAFLAEASVMTTLRH------- 59

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
              + VQ+       N + IV E +   SL D+L+        +     F   + E + Y
Sbjct: 60  --PNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEY 117

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           + +   +H DL   N+L+  SE                   + K S     DFG     +
Sbjct: 118 LEEKNFVHRDLAARNVLV--SE-----------------DLVAKVS-----DFGLAKEAS 153

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
           Q   S      + APE +    +S   D+WS G +L E+
Sbjct: 154 QGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 43.8 bits (103), Expect = 8e-05
 Identities = 62/261 (23%), Positives = 105/261 (40%), Gaps = 45/261 (17%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
           +  L  +G+G+FG+V+    + T E  AIK+++     +D      M+E  VL   A  D
Sbjct: 2   FNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVL---ALQD 58

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYC-PFPVDLVREFGRQLLE 180
           K       Q+ + F   + +  V E +  G  ++   +  K+  P  V    E    L  
Sbjct: 59  K--PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLF- 115

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
              ++H   +I+ DLK +N++L              S G            IK+ DFG  
Sbjct: 116 ---FLHRRGIIYRDLKLDNVML-------------DSEGH-----------IKIADFGMC 148

Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                D     +   T  Y APE+I    +    D W+ G +L E+  G+  F   +  E
Sbjct: 149 KEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 208

Query: 298 HL-AMMERALGPLPEHMIRRA 317
              ++ME  +   P+ + + A
Sbjct: 209 LFQSIMEHNVS-YPKSLSKEA 228

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 33/119 (27%), Positives = 52/119 (43%), Gaps = 32/119 (26%)

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           RQ+L  +AY+H   ++H D+KP N+L+ S++                         +K+ 
Sbjct: 175 RQILSGIAYLHRRHIVHRDIKPSNLLINSAK------------------------NVKIA 210

Query: 236 DFGSTAFDNQNH---SSIVSTRHYRAPEVI-----LGLGWSYPCDMWSVGCILVELCTG 286
           DFG +    Q     +S V T  Y +PE I      G    Y  D+WS+G  ++E   G
Sbjct: 211 DFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLG 269

Length = 353

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 42.1 bits (99), Expect = 3e-04
 Identities = 52/233 (22%), Positives = 96/233 (41%), Gaps = 50/233 (21%)

Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +L ++G+G +G V +   R T   +A+K +R      K+    M E+D+L       K  
Sbjct: 5   VLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIM-ELDILH------KAV 57

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL--KRNKYCPFPVDLVREFGRQLLESVAY 184
           S + V     F     + +  E +     D L          P D++R     +++ + +
Sbjct: 58  SPYIVDFYGAFFIEGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKF 117

Query: 185 M-HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
           +  +  +IH D+KP N+L+             + +G+           +KL DFG +   
Sbjct: 118 LKEEHNIIHRDVKPTNVLV-------------NGNGQ-----------VKLCDFGVSG-- 151

Query: 244 NQNHSSIVST----RHYRAPEVILGLG------WSYPCDMWSVGCILVELCTG 286
               +S+  T    + Y APE I   G      ++   D+WS+G  ++E+  G
Sbjct: 152 -NLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALG 203

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173766 cd08226, PK_STRAD_beta, Pseudokinase domain of STE20-related kinase adapter protein beta

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 51/226 (22%), Positives = 90/226 (39%), Gaps = 25/226 (11%)

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H    IH ++K  +IL+     + L       SG      L ++         
Sbjct: 111 LRGLNYLHQNGYIHRNIKASHILISGDGLVSL-------SGLSHLYSLVRNG-----QKA 158

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
              +D    S+  S   + +PE++     G++   D++SVG    EL TG   FQ   ++
Sbjct: 159 KVVYDFPQFST--SVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQ---DM 213

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEG---AVSRESIKAVKKLDRLK 353
               M+ + L   P   +   +   E+   + S+     G   +V    +      +RL+
Sbjct: 214 LRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLR 273

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
              S     A   L +L    L+ DP +R +A   L+H FF+ + E
Sbjct: 274 TPSSKTFSPAFQNLVELC---LQQDPEKRPSASSLLSHAFFKQVKE 316

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. STRAD-beta is also referred to as ALS2CR2 (Amyotrophic lateral sclerosis 2 chromosomal region candidate gene 2 protein), since the human gene encoding it is located within the juvenile ALS2 critical region on chromosome 2q33-q34. It is not linked to the development of ALS2. Length = 328

>gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional

 Score = 40.7 bits (95), Expect = 9e-04
 Identities = 37/159 (23%), Positives = 65/159 (40%), Gaps = 35/159 (22%)

Query: 67  RYKILSKMGEGTFGRVLE--CWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK 124
            +KI   +G G FG V E  C         A+  + ++    +  ++E  V  ++   DK
Sbjct: 13  EWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLEN--ETIVMETLVYNNIYDIDK 70

Query: 125 GGSSHCVQIRNWFDYRN--HI-------C------------IVFEKLGPSLFDFLKRNKY 163
                   I  W +  N  H+       C            I+ EKL  +  +  KR K 
Sbjct: 71  --------IALWKNIHNIDHLGIPKYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIKC 122

Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
                 L++   + +L ++ Y+H+  + H D+KPENI++
Sbjct: 123 KNKK--LIKNIMKDMLTTLEYIHEHGISHGDIKPENIMV 159

Length = 294

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 40.0 bits (94), Expect = 0.001
 Identities = 57/258 (22%), Positives = 89/258 (34%), Gaps = 76/258 (29%)

Query: 74  MGEGTFGRVLECWDRQTQER---VAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           +G G FG V++        +   VA+K ++   I   +   + E  V+  L         
Sbjct: 3   LGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQL--------- 53

Query: 129 HCVQIRNWFDYRNHICIV----------------FEKLGPSLFDFLKRNKYCPFPVDLVR 172
                       +H CIV                   LGP L  +LK+ +    PV  ++
Sbjct: 54  ------------DHPCIVRLIGVCKGEPLMLVMELAPLGP-LLKYLKKRRE--IPVSDLK 98

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
           E   Q+   +AY+     +H DL   N+LLV+    K+                      
Sbjct: 99  ELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKIS--------------------- 137

Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT- 285
              DFG +           +T   R      APE I    +S   D+WS G  L E  + 
Sbjct: 138 ---DFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSY 194

Query: 286 GEALFQTHENLEHLAMME 303
           G   +   +  E +AM+E
Sbjct: 195 GAKPYGEMKGAEVIAMLE 212

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 40.1 bits (94), Expect = 0.001
 Identities = 60/229 (26%), Positives = 94/229 (41%), Gaps = 42/229 (18%)

Query: 66  PR--YKILSKMGEGTFGRVLE-CWDRQTQERVAIKVVRS--IRKYRDAAMIEIDVLQHLA 120
           PR  + +  K+G G FG V E  W  + + RVAIK+++S  + K +D    E+  L+ L 
Sbjct: 4   PREEFTLERKLGSGYFGEVWEGLW--KNRVRVAIKILKSDDLLKQQDFQK-EVQALKRL- 59

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLL 179
           ++    S   V       Y     I+ E +   SL  FL+  +    PV  + +   Q+ 
Sbjct: 60  RHKHLISLFAVCSVGEPVY-----IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVA 114

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           E +AY+ +   IH DL   NIL+                GE            K+ DFG 
Sbjct: 115 EGMAYLEEQNSIHRDLAARNILV----------------GE--------DLVCKVADFGL 150

Query: 240 TAFDNQNHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
                ++       +    + APE      +S   D+WS G +L E+ T
Sbjct: 151 ARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFT 199

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 39.2 bits (91), Expect = 0.002
 Identities = 51/240 (21%), Positives = 100/240 (41%), Gaps = 36/240 (15%)

Query: 73  KMGEGTFGRVLECW--DRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGS 127
           ++G G FG V +     +++++ VA+K++++       +D  + E +V+Q L        
Sbjct: 2   ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM 61

Query: 128 SHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               +  +W        +V E  +LGP L  FL++NK+       + E   Q+   + Y+
Sbjct: 62  IGICEAESWM-------LVMELAELGP-LNKFLQKNKH--VTEKNITELVHQVSMGMKYL 111

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
            +   +H DL   N+LLV+  + K+  +  S                K +      +  +
Sbjct: 112 EETNFVHRDLAARNVLLVTQHYAKISDFGLS----------------KALGADENYYKAK 155

Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LCTGEALFQTHENLEHLAMMER 304
            H        + APE +    +S   D+WS G ++ E    G+  ++  +  E   M+E 
Sbjct: 156 THGKW--PVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIES 213

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|133207 cd05076, PTK_Tyk2_rpt1, Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 45/163 (27%), Positives = 64/163 (39%), Gaps = 23/163 (14%)

Query: 151 GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL 210
           GP   D   R +    PV       +QL  +++Y+ D  L+H ++  +NILL        
Sbjct: 101 GP--LDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGL--- 155

Query: 211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG-WSY 269
                 + G  PF        IKL D G + F   +    V    + APE + G    S 
Sbjct: 156 ------AEGTSPF--------IKLSDPGVS-FTALSREERVERIPWIAPECVPGGNSLST 200

Query: 270 PCDMWSVGCILVELC-TGEALFQTHENLEHLAMMERALGPLPE 311
             D WS G  L+E+C  GE   +     E     E+    LPE
Sbjct: 201 AADKWSFGTTLLEICFDGEVPLKERTPSEKERFYEKKHR-LPE 242

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 274

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 39.9 bits (93), Expect = 0.002
 Identities = 39/148 (26%), Positives = 68/148 (45%), Gaps = 13/148 (8%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEID-VLQHLAKNDK-- 124
           + I+  +  G FG+V     +   +  A+KVV+       A MI  + V Q  A+ D   
Sbjct: 6   FVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKK------ADMINKNMVHQVQAERDALA 59

Query: 125 -GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
              S   V +       N++ +V E L G  +   L    Y  F  ++  ++  ++  ++
Sbjct: 60  LSKSPFIVHLYYSLQSANNVYLVMEYLIGGDVKSLLHIYGY--FDEEMAVKYISEVALAL 117

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKL 210
            Y+H   +IH DLKP+N+L+ +   IKL
Sbjct: 118 DYLHRHGIIHRDLKPDNMLISNEGHIKL 145

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 39.8 bits (93), Expect = 0.003
 Identities = 34/144 (23%), Positives = 62/144 (43%), Gaps = 34/144 (23%)

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L+++A  H+  ++H DLKP+NI++             S +G  P          K++D
Sbjct: 87  QVLDALACAHNQGIVHRDLKPQNIMV-------------SQTGVRP--------HAKVLD 125

Query: 237 FGSTAFDNQNHSS----------IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           FG          +          ++ T  Y APE + G   +   D+++ G I +E  TG
Sbjct: 126 FGIGTLLPGVRDADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTG 185

Query: 287 EALFQTHENLEHLAMMERALGPLP 310
           + + Q     E   ++ + L P+ 
Sbjct: 186 QRVVQGASVAE---ILYQQLSPVD 206

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 39.4 bits (92), Expect = 0.004
 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 19/113 (16%)

Query: 181 SVAYMHDLRLIHTDLKPENILL-VSSEFIKLP-GYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           ++ Y+H   ++H DLKP+NILL +  E + L  G       E             L+D  
Sbjct: 125 TIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEED----------LLDI- 173

Query: 239 STAFDNQNHSS------IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
                N  +SS      IV T  Y APE +LG+  S   D++++G IL ++ T
Sbjct: 174 DVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLT 226

Length = 932

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	399
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
PTZ00284	467	protein kinase; Provisional	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
KOG1290	590	consensus Serine/threonine protein kinase [Signal	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
KOG0696	683	consensus Serine/threonine protein kinase [Signal	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
PHA03207	392	serine/threonine kinase US3; Provisional	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	100.0
PHA03211	461	serine/threonine kinase US3; Provisional	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	100.0
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	100.0
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	100.0
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	100.0
PLN00009	294	cyclin-dependent kinase A; Provisional	100.0
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	100.0
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	100.0
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	100.0
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	100.0
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	100.0
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	100.0
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	100.0
PHA03210	501	serine/threonine kinase US3; Provisional	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	100.0
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	100.0
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	100.0
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	100.0
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	100.0
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	100.0
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	100.0
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	100.0
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	100.0
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	100.0
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	100.0
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	100.0
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	100.0
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	100.0
PTZ00024	335	cyclin-dependent protein kinase; Provisional	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	100.0
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	100.0
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	100.0
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	100.0
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	100.0
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	100.0
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	100.0
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	100.0
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	100.0
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	100.0
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	100.0
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	100.0
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	100.0
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	100.0
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	100.0
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	100.0
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	100.0
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	100.0
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	100.0
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	100.0
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	100.0
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	100.0
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	100.0
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	100.0
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	100.0
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	100.0
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	100.0
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	100.0
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	100.0
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	100.0
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	100.0
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	100.0
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	100.0
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	100.0
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	100.0
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	100.0
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	100.0
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	100.0
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	100.0
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	100.0
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	100.0
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	100.0
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	100.0
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	100.0
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	100.0
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	100.0
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	100.0
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	100.0
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	100.0
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	100.0
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	100.0
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	100.0
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	100.0
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	100.0
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	100.0
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	100.0
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	100.0
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	100.0
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	100.0
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	100.0
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	100.0
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	100.0
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	100.0
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	100.0
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	100.0
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	100.0
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	100.0
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	100.0
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	100.0
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	100.0
KOG0695	593	consensus Serine/threonine protein kinase [Signal	100.0
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	100.0
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	100.0
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	100.0
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	100.0
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	100.0
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	100.0
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	100.0
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	100.0
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	100.0
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	100.0
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	100.0
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	100.0
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	100.0
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	100.0
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	100.0
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	100.0
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	100.0
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	100.0
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	100.0
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	100.0
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	100.0
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	100.0
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	100.0
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	100.0
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	100.0
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	100.0
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	100.0
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	100.0
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	100.0
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	100.0
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	100.0
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	100.0
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	100.0
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	100.0
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	100.0
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	100.0
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	100.0
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	100.0
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	100.0
PHA02882	294	putative serine/threonine kinase; Provisional	100.0
KOG1187	361	consensus Serine/threonine protein kinase [Signal	100.0
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	100.0
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	100.0
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	100.0
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	100.0
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	100.0
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	100.0
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	100.0
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	100.0
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	100.0
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	100.0
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	100.0
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	100.0
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	100.0
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	100.0
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	100.0
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	100.0
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	100.0
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	100.0
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	100.0
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	100.0
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	100.0
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	100.0
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	100.0
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	100.0
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	100.0
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	100.0
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	100.0
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	100.0
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	100.0
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	100.0
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	100.0
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	100.0
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	100.0
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	100.0
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	100.0
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	100.0
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	100.0
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	100.0
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	100.0
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	100.0
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	100.0
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	100.0
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	100.0
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	100.0
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	100.0
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	100.0
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	100.0
KOG1167	418	consensus Serine/threonine protein kinase of the C	100.0
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	100.0
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	100.0
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	100.0
PLN03224	507	probable serine/threonine protein kinase; Provisio	100.0
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	100.0
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	100.0
KOG2052	513	consensus Activin A type IB receptor, serine/threo	100.0
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	100.0
KOG1027	903	consensus Serine/threonine protein kinase and endo	100.0
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	100.0
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	100.0
KOG1152	772	consensus Signal transduction serine/threonine kin	100.0
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	100.0
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	100.0
KOG3653	534	consensus Transforming growth factor beta/activin	100.0
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	100.0
KOG0576	829	consensus Mitogen-activated protein kinase kinase	100.0
PLN00181	793	protein SPA1-RELATED; Provisional	100.0
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.98
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.98
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.97
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.97
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.97
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.97
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.97
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.96
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.96
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.96
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.95
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.94
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.94
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.93
PRK09188	365	serine/threonine protein kinase; Provisional	99.93
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.91
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.9
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.89
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.89
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.88
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.88
PRK12274	218	serine/threonine protein kinase; Provisional	99.88
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.87
PRK10345	210	hypothetical protein; Provisional	99.86
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.84
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.83
smart00090	237	RIO RIO-like kinase.	99.82
PRK14879	211	serine/threonine protein kinase; Provisional	99.78
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.74
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.74
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.74
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.73
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.72
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.69
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.69
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.66
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.65
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	99.64
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	99.52
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	99.49
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	99.47
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	99.44
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.4
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.37
KOG3087	229	consensus Serine/threonine protein kinase [General	99.33
KOG1243	690	consensus Protein kinase [General function predict	99.31
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	99.27
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	99.16
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	99.13
KOG3741	655	consensus Poly(A) ribonuclease subunit [RNA proces	99.09
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	99.01
KOG2137	700	consensus Protein kinase [Signal transduction mech	98.99
PRK09902	216	hypothetical protein; Provisional	98.84
COG4248	637	Uncharacterized protein with protein kinase and he	98.8
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	98.73
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	98.73
COG0661	517	AarF Predicted unusual protein kinase [General fun	98.69
COG0478	304	RIO-like serine/threonine protein kinase fused to	98.64
PF01636	239	APH: Phosphotransferase enzyme family This family	98.52
COG1718	268	RIO1 Serine/threonine protein kinase involved in c	98.49
TIGR02172	226	Fb_sc_TIGR02172 Fibrobacter succinogenes paralogou	98.42
KOG0576	829	consensus Mitogen-activated protein kinase kinase	98.39
PF10707	199	YrbL-PhoP_reg: PhoP regulatory network protein Yrb	98.36
PF13095	207	FTA2: Kinetochore Sim4 complex subunit FTA2	98.24
KOG1235	538	consensus Predicted unusual protein kinase [Genera	98.23
cd05155	235	APH_ChoK_like_1 Uncharacterized bacterial proteins	98.21
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	98.18
COG2112	201	Predicted Ser/Thr protein kinase [Signal transduct	98.17
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	98.09
PLN02876	822	acyl-CoA dehydrogenase	98.06
cd05157	235	ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes.	97.94
PRK09550	401	mtnK methylthioribose kinase; Reviewed	97.83
KOG2270	520	consensus Serine/threonine protein kinase involved	97.8
KOG1093	725	consensus Predicted protein kinase (contains TBC a	97.75
cd05153	296	HomoserineK_II Homoserine Kinase, type II. Homoser	97.63
TIGR02721	256	ycfN_thiK thiamine kinase. Members of this family	97.62
cd05156	302	ChoK_euk Choline Kinase (ChoK) in eukaryotes. The	97.56
PRK05231	319	homoserine kinase; Provisional	97.47
TIGR00938	307	thrB_alt homoserine kinase, Neisseria type. Homose	97.39
TIGR01767	370	MTRK 5-methylthioribose kinase. This enzyme is inv	97.28
KOG2268	465	consensus Serine/threonine protein kinase [Signal	97.15
PRK10593	297	hypothetical protein; Provisional	97.13
PRK12396	409	5-methylribose kinase; Reviewed	97.01
PLN02236	344	choline kinase	97.0
KOG1826	2724	consensus Ras GTPase activating protein RasGAP/neu	96.96
cd05152	276	MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH	96.84
PLN02421	330	phosphotransferase, alcohol group as acceptor/kina	96.83
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	96.7
PRK11768	325	serine/threonine protein kinase; Provisional	96.48
COG2334	331	Putative homoserine kinase type II (protein kinase	96.44
TIGR02906	313	spore_CotS spore coat protein, CotS family. Member	96.43
PLN02756	418	S-methyl-5-thioribose kinase	96.34
PRK06148	1013	hypothetical protein; Provisional	96.05
PF01633	211	Choline_kinase: Choline/ethanolamine kinase; Inter	95.8
COG3173	321	Predicted aminoglycoside phosphotransferase [Gener	95.62
PTZ00384	383	choline kinase; Provisional	95.38
KOG1236	565	consensus Predicted unusual protein kinase [Genera	95.24
COG5072	488	ALK1 Serine/threonine kinase of the haspin family	94.33
PF03881	288	Fructosamin_kin: Fructosamine kinase; InterPro: IP	94.33
PTZ00296	442	choline kinase; Provisional	94.29
COG3001	286	Uncharacterized protein conserved in bacteria [Fun	93.27
PF07387	308	Seadorna_VP7: Seadornavirus VP7; InterPro: IPR0099	92.89

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.5e-60  Score=429.65  Aligned_cols=261  Identities=31%  Similarity=0.530  Sum_probs=223.3

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--------hhHHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--------YRDAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      ..+.+.|.+.+.||+|+||.|-+|..+.+|+.||||++++...        ......+|++||+.|.      |||||++
T Consensus       168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~------HP~IV~~  241 (475)
T KOG0615|consen  168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLS------HPNIVRI  241 (475)
T ss_pred             chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcC------CCCEEEE
Confidence            3467789999999999999999999999999999999965221        1223568999999986      4999999


Q ss_pred             ceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      +++|+..+..|+||||+ ||+|++.+-.++  .+.+...+.+++||+.||.|||++||+||||||+|||+..+       
T Consensus       242 ~d~f~~~ds~YmVlE~v~GGeLfd~vv~nk--~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~-------  312 (475)
T KOG0615|consen  242 KDFFEVPDSSYMVLEYVEGGELFDKVVANK--YLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSND-------  312 (475)
T ss_pred             eeeeecCCceEEEEEEecCccHHHHHHhcc--ccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccC-------
Confidence            99999999999999999 999999999888  58999999999999999999999999999999999999654       


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccC--CCCCcccccCCCccchhhhhCCC---CCCcchhHHHHHHHHHHHhCC
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD--NQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGE  287 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~--~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~ell~g~  287 (399)
                                    ..+..+||+|||+|+..  .....++|||+.|.|||++.+..   +..++|+|||||+||-+++|.
T Consensus       313 --------------~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~  378 (475)
T KOG0615|consen  313 --------------AEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGY  378 (475)
T ss_pred             --------------CcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccC
Confidence                          24678999999999987  44568899999999999998764   345889999999999999999


Q ss_pred             CCCCCCCcHH-HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          288 ALFQTHENLE-HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       288 ~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      +||++..... ...+|.++...+-                                              ++.+.+++.+
T Consensus       379 pPFS~~~~~~sl~eQI~~G~y~f~----------------------------------------------p~~w~~Isee  412 (475)
T KOG0615|consen  379 PPFSEEYTDPSLKEQILKGRYAFG----------------------------------------------PLQWDRISEE  412 (475)
T ss_pred             CCcccccCCccHHHHHhcCccccc----------------------------------------------ChhhhhhhHH
Confidence            9998755433 6666655443321                                              2334578899


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ..+||.+||.+||++|||+.|+|+||||+.+
T Consensus       413 a~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~  443 (475)
T KOG0615|consen  413 ALDLINWMLVVDPENRPSADEALNHPWFKDA  443 (475)
T ss_pred             HHHHHHHhhEeCcccCcCHHHHhcChhhhcc
Confidence            9999999999999999999999999999964

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-59  Score=419.91  Aligned_cols=350  Identities=59%  Similarity=1.046  Sum_probs=304.3

Q ss_pred             CCCCCCCCCCCCCCceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhh
Q 015867           41 KHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA  120 (399)
Q Consensus        41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~  120 (399)
                      ...+++...++.+|.+.+..++.+.++|.++..+|+|.||.|-.|++..++..||||+++...+.+.....|+++++.+.
T Consensus        64 ~~~~~~~~~dD~dGH~v~~~gD~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~  143 (415)
T KOG0671|consen   64 RLESRPGRPDDKDGHYVYQVGDILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKIN  143 (415)
T ss_pred             cccCCCCCCCCCCceEEEEeccccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence            44455566688888899999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             hcCCCCCcceeeeceeeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       121 ~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      +....+.-.|+++.+||+..++.|+|+|.+|-++++++..+...+++...++.++.|++.+++|||+.+++|.||||+||
T Consensus       144 ~~DP~g~~rcv~m~~wFdyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENI  223 (415)
T KOG0671|consen  144 ESDPNGKFRCVQMRDWFDYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENI  223 (415)
T ss_pred             hcCCCCceEEEeeehhhhccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheE
Confidence            87766667899999999999999999999999999999999888999999999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  280 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  280 (399)
                      |+.++...+.......    .-......+..++++|||.|.+..+..++.+.|.-|+|||++.+-+++.++||||+||||
T Consensus       224 Lfvss~~~~~~~~k~~----~~~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL  299 (415)
T KOG0671|consen  224 LFVSSEYFKTYNPKKK----VCFIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCIL  299 (415)
T ss_pred             EEeccceEEEeccCCc----cceeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEE
Confidence            9988777655433222    011123467889999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccc
Q 015867          281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV  360 (399)
Q Consensus       281 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (399)
                      +|+.+|...|...++.|.+..++..++++|..|+.+..  ..++|..+ +++||++....+ ...+......-.......
T Consensus       300 ~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~--~~Kyf~~~-rldw~e~~~~~~-~k~v~~~ckpl~~~~~~~  375 (415)
T KOG0671|consen  300 VELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTR--KEKYFRRG-RLDWPEVSSKGK-SKYVFEPCKPLKKYMLQD  375 (415)
T ss_pred             EEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhh--hHhhhhcc-cccCcccccccc-chhhhcCCccHHHHhccC
Confidence            99999999999999999999999999999999998875  67788888 999999887664 222222222222222334


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       361 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +....++.|||++||.+||.+|+|+.|+|.||||+.+-
T Consensus       376 d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~  413 (415)
T KOG0671|consen  376 DLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT  413 (415)
T ss_pred             cHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence            45556789999999999999999999999999999874

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=6.8e-58  Score=436.35  Aligned_cols=325  Identities=39%  Similarity=0.705  Sum_probs=274.2

Q ss_pred             CCCCCceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcc
Q 015867           50 DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH  129 (399)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~  129 (399)
                      ++.++.+.+-.++.+..+|.|++.||+|+||.|-+|++..|++.||||+++.......+...|+.+|..|++......-|
T Consensus       170 ~~~~~dY~~v~~d~i~~rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n  249 (586)
T KOG0667|consen  170 DDEDGDYQLVVNDHIAYRYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYN  249 (586)
T ss_pred             CCCCCceeEEecceeEEEEEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCee
Confidence            34556677788888888999999999999999999999999999999999988888889999999999999666666679


Q ss_pred             eeeeceeeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccccc
Q 015867          130 CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK  209 (399)
Q Consensus       130 iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~  209 (399)
                      ||+++++|...+++|||+|.++.+|+++++.+....++...++.++.||+.||.+||+.||||+||||+||||...    
T Consensus       250 ~Vrm~d~F~fr~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~----  325 (586)
T KOG0667|consen  250 IVRMLDYFYFRNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDP----  325 (586)
T ss_pred             EEEeeeccccccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccC----
Confidence            9999999999999999999999999999999988899999999999999999999999999999999999999653    


Q ss_pred             CCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                        ....+||+|||+|++......+++.+..|+|||++.|.+|+.+.||||||||++||++|.+.
T Consensus       326 ------------------~r~~vKVIDFGSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PL  387 (586)
T KOG0667|consen  326 ------------------KRSRIKVIDFGSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPL  387 (586)
T ss_pred             ------------------CcCceeEEecccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccc
Confidence                              34589999999999988887799999999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccC-CcccCCC------CCccchHHHHHHH------hhh-hhhhh
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR-GSRLNWP------EGAVSRESIKAVK------KLD-RLKNM  355 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~p------~~~~~~~~~~~~~------~~~-~~~~~  355 (399)
                      |.+.++.+++..|.+.+|.+|..|....... ..+|.. .+.....      .+...........      ..+ ..+.+
T Consensus       388 fpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~-~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l  466 (586)
T KOG0667|consen  388 FPGDNEYDQLARIIEVLGLPPPKMLDTAKKA-HKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSL  466 (586)
T ss_pred             cCCCCHHHHHHHHHHHhCCCCHHHHHhcccc-ceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCccc
Confidence            9999999999999999999999999888766 455555 2211111      1110111111111      011 22222


Q ss_pred             hhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       356 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ...........+.|||.+||..||.+|+|+.++|+||||++.
T Consensus       467 ~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~  508 (586)
T KOG0667|consen  467 ESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGT  508 (586)
T ss_pred             chhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCcccccc
Confidence            233333455678999999999999999999999999999964

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=5.5e-58  Score=410.00  Aligned_cols=253  Identities=32%  Similarity=0.552  Sum_probs=225.9

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++++.||+|+||+||.++.+.+++.||+|++++..    ........|..||..+.      ||+||+++..|++.
T Consensus        24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~------hPFiv~l~ysFQt~   97 (357)
T KOG0598|consen   24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIK------HPFIVKLIYSFQTE   97 (357)
T ss_pred             hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCC------CCcEeeeEEecccC
Confidence            457999999999999999999999999999999997633    33456777889998865      59999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+|||+||+ ||.|+..|++.+  .|++..++.|+.+|+.||.|||++|||||||||+|||+                 
T Consensus        98 ~kLylVld~~~GGeLf~hL~~eg--~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILL-----------------  158 (357)
T KOG0598|consen   98 EKLYLVLDYLNGGELFYHLQREG--RFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILL-----------------  158 (357)
T ss_pred             CeEEEEEeccCCccHHHHHHhcC--CcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeee-----------------
Confidence            9999999999 999999999887  69999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCccc---CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAF---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             +..++++|+|||+++.   .+..+.++|||+.|||||++.+.+|+.++|+||||+++|||++|.+||.+.+..
T Consensus       159 -------d~~GHi~LtDFgL~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~  231 (357)
T KOG0598|consen  159 -------DEQGHIKLTDFGLCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVK  231 (357)
T ss_pred             -------cCCCcEEEeccccchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHH
Confidence                   5678899999999874   344567789999999999999999999999999999999999999999999998


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      .....|.......++                                                 .-.+.++++||+++|.
T Consensus       232 ~~~~~I~~~k~~~~p-------------------------------------------------~~ls~~ardll~~LL~  262 (357)
T KOG0598|consen  232 KMYDKILKGKLPLPP-------------------------------------------------GYLSEEARDLLKKLLK  262 (357)
T ss_pred             HHHHHHhcCcCCCCC-------------------------------------------------ccCCHHHHHHHHHHhc
Confidence            888888765422221                                                 2257888999999999


Q ss_pred             cCCCCCC----CHHHHhCCccccCCC
Q 015867          377 YDPSERL----TARQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~----t~~ell~hp~f~~~~  398 (399)
                      .||.+|+    ++.++.+||||+++|
T Consensus       263 rdp~~RLg~~~d~~~ik~HpfF~~in  288 (357)
T KOG0598|consen  263 RDPRQRLGGPGDAEEIKRHPFFKGIN  288 (357)
T ss_pred             cCHHHhcCCCCChHHhhcCcccccCC
Confidence            9999997    688999999999985

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.1e-57  Score=427.49  Aligned_cols=249  Identities=35%  Similarity=0.572  Sum_probs=230.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEec----chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS----IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .+|...+.||+|||+.||.+++..+|+.||+|++.+    ....+.....|++|.+.|.      |||||+++++|++.+
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~------HpnIV~f~~~FEDs~   91 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLK------HPNIVQFYHFFEDSN   91 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcC------CCcEEeeeeEeecCC
Confidence            579999999999999999999999999999999976    4566777888999998886      499999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      +.|||+|+| .++|..++++.+  .+++..++++++||+.||.|||+++|+|||||..|+|+                  
T Consensus        92 nVYivLELC~~~sL~el~Krrk--~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL------------------  151 (592)
T KOG0575|consen   92 NVYIVLELCHRGSLMELLKRRK--PLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFL------------------  151 (592)
T ss_pred             ceEEEEEecCCccHHHHHHhcC--CCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheee------------------
Confidence            999999999 999999999766  79999999999999999999999999999999999998                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                            +.+..+||+|||+|....   ....+.||||-|.|||++....++..+||||+||+||.||+|++||...+..+
T Consensus       152 ------~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vke  225 (592)
T KOG0575|consen  152 ------NENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVKE  225 (592)
T ss_pred             ------cCcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHHH
Confidence                  568899999999998744   55689999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ++.+|......+|.                                                  .+|.+++|||.+||+.
T Consensus       226 ty~~Ik~~~Y~~P~--------------------------------------------------~ls~~A~dLI~~lL~~  255 (592)
T KOG0575|consen  226 TYNKIKLNEYSMPS--------------------------------------------------HLSAEAKDLIRKLLRP  255 (592)
T ss_pred             HHHHHHhcCccccc--------------------------------------------------ccCHHHHHHHHHHhcC
Confidence            99999887766664                                                  3577889999999999


Q ss_pred             CCCCCCCHHHHhCCccccC
Q 015867          378 DPSERLTARQALNHPFFRN  396 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~  396 (399)
                      ||.+|||+.++|.|+||++
T Consensus       256 ~P~~Rpsl~~vL~h~Ff~~  274 (592)
T KOG0575|consen  256 NPSERPSLDEVLDHPFFKS  274 (592)
T ss_pred             CcccCCCHHHHhcCHhhhC
Confidence            9999999999999999964

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-57  Score=418.41  Aligned_cols=253  Identities=30%  Similarity=0.501  Sum_probs=228.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ..+|.+.+.||.|+|++|++|++..+++.||||++.+.-    ...+....|..+|..|.     +||.|++|+..|+++
T Consensus        72 ~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~-----~hPgivkLy~TFQD~  146 (604)
T KOG0592|consen   72 PNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLS-----GHPGIVKLYFTFQDE  146 (604)
T ss_pred             hhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhh-----CCCCeEEEEEEeecc
Confidence            457999999999999999999999999999999996522    22345667888999987     689999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      ..+|+|+||+ +|+|.++|++.+  .|++..++.|+.||+.||+|||+.|||||||||+||||                 
T Consensus       147 ~sLYFvLe~A~nGdll~~i~K~G--sfde~caR~YAAeIldAleylH~~GIIHRDlKPENILL-----------------  207 (604)
T KOG0592|consen  147 ESLYFVLEYAPNGDLLDLIKKYG--SFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILL-----------------  207 (604)
T ss_pred             cceEEEEEecCCCcHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeE-----------------
Confidence            9999999999 999999999987  69999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC----------------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN----------------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  283 (399)
                             +.+++++|+|||.|...+..                ..+++||..|.+||++.+...++.+|+|+||||||+|
T Consensus       208 -------d~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQm  280 (604)
T KOG0592|consen  208 -------DKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQM  280 (604)
T ss_pred             -------cCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHH
Confidence                   66888999999987642211                1458999999999999999999999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhh
Q 015867          284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA  363 (399)
Q Consensus       284 l~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (399)
                      +.|.+||.+.++.-+.++|......+|+                                                  .+
T Consensus       281 laG~PPFra~NeyliFqkI~~l~y~fp~--------------------------------------------------~f  310 (604)
T KOG0592|consen  281 LAGQPPFRAANEYLIFQKIQALDYEFPE--------------------------------------------------GF  310 (604)
T ss_pred             hcCCCCCccccHHHHHHHHHHhcccCCC--------------------------------------------------CC
Confidence            9999999999999999999998766553                                                  45


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          364 RSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       364 ~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ++.++|||.++|..||.+|+|+++|.+||||++|+
T Consensus       311 p~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~Vd  345 (604)
T KOG0592|consen  311 PEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGVD  345 (604)
T ss_pred             CHHHHHHHHHHHccCccccccHHHHhhCcccccCC
Confidence            67889999999999999999999999999999985

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=1.5e-56  Score=400.92  Aligned_cols=255  Identities=29%  Similarity=0.487  Sum_probs=216.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEe--cchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC-e
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN-H  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~--~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-~  142 (399)
                      .+.+.++.||+|..|+||+|+++.+++.+|+|++.  .....+++..+|+++++...      +|+||.+|+.|...+ .
T Consensus        79 ~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~------spyIV~~ygaF~~~~~~  152 (364)
T KOG0581|consen   79 SDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQ------SPYIVGFYGAFYSNGEE  152 (364)
T ss_pred             HHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCC------CCCeeeEeEEEEeCCce
Confidence            46788899999999999999999999999999994  34455677788888888774      599999999999988 5


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ++|+|||| +|+|.+++...+  .+++..+..++.+++.||.|||. .+||||||||+|||+                  
T Consensus       153 isI~mEYMDgGSLd~~~k~~g--~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLv------------------  212 (364)
T KOG0581|consen  153 ISICMEYMDGGSLDDILKRVG--RIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLV------------------  212 (364)
T ss_pred             EEeehhhcCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeee------------------
Confidence            99999999 999999998876  69999999999999999999995 899999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCccc-CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC--CcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH--ENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~--~~~~  297 (399)
                            +..+.+||||||.+.. .+....+++||..|||||.+.+..|+.++||||||++++||.+|+.||...  +...
T Consensus       213 ------NskGeVKicDFGVS~~lvnS~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~  286 (364)
T KOG0581|consen  213 ------NSKGEVKICDFGVSGILVNSIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLD  286 (364)
T ss_pred             ------ccCCCEEeccccccHHhhhhhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCC
Confidence                  4578899999998876 444568999999999999999999999999999999999999999999874  2223


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      .+..+..+...+|+.                    .|+                         ..+|+++++||..||++
T Consensus       287 ~~~Ll~~Iv~~ppP~--------------------lP~-------------------------~~fS~ef~~FV~~CL~K  321 (364)
T KOG0581|consen  287 IFELLCAIVDEPPPR--------------------LPE-------------------------GEFSPEFRSFVSCCLRK  321 (364)
T ss_pred             HHHHHHHHhcCCCCC--------------------CCc-------------------------ccCCHHHHHHHHHHhcC
Confidence            333333332222221                    111                         13789999999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|+|+.|+++|||+++.
T Consensus       322 dp~~R~s~~qLl~Hpfi~~~  341 (364)
T KOG0581|consen  322 DPSERPSAKQLLQHPFIKKF  341 (364)
T ss_pred             CcccCCCHHHHhcCHHHhhc
Confidence            99999999999999999864

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=4.9e-56  Score=384.98  Aligned_cols=251  Identities=27%  Similarity=0.489  Sum_probs=229.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++++.||.|+||.|.+++.+.+|..||+|++.+..    ++......|..+|+.+.      ||+++++++.|.+.+
T Consensus        44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~------~PFlv~l~~t~~d~~  117 (355)
T KOG0616|consen   44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVS------HPFLVKLYGTFKDNS  117 (355)
T ss_pred             hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhcc------CceeEEEEEeeccCC
Confidence            46999999999999999999999999999999997633    33345666888888876      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+||||||+ ||.|++++++.+  +|++..++.|+.||+.||+|||+.+|++|||||+|||+                  
T Consensus       118 ~lymvmeyv~GGElFS~Lrk~~--rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLl------------------  177 (355)
T KOG0616|consen  118 NLYMVMEYVPGGELFSYLRKSG--RFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLL------------------  177 (355)
T ss_pred             eEEEEEeccCCccHHHHHHhcC--CCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeee------------------
Confidence            999999999 999999999877  69999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                            ++++.+||+|||+|+.....+-+.||||.|+|||++...+|+.++|+|||||++|||+.|.+||...+...++.
T Consensus       178 ------D~~G~iKitDFGFAK~v~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~  251 (355)
T KOG0616|consen  178 ------DQNGHIKITDFGFAKRVSGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYE  251 (355)
T ss_pred             ------ccCCcEEEEeccceEEecCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHH
Confidence                  56788999999999998888899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      +|.+....+|.                                                  -++.+++|||.++|+.|-.
T Consensus       252 KI~~~~v~fP~--------------------------------------------------~fs~~~kdLl~~LL~vD~t  281 (355)
T KOG0616|consen  252 KILEGKVKFPS--------------------------------------------------YFSSDAKDLLKKLLQVDLT  281 (355)
T ss_pred             HHHhCcccCCc--------------------------------------------------ccCHHHHHHHHHHHhhhhH
Confidence            99887766664                                                  4577889999999999999


Q ss_pred             CCC-----CHHHHhCCccccCCC
Q 015867          381 ERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       381 ~R~-----t~~ell~hp~f~~~~  398 (399)
                      +|.     ...+|.+||||++++
T Consensus       282 ~R~gnlknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  282 KRFGNLKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             hhhcCcCCCccccccCccccccc
Confidence            994     578999999999874

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=1.1e-54  Score=404.24  Aligned_cols=279  Identities=29%  Similarity=0.465  Sum_probs=222.9

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++++.||+|+||.||+|+.+.||+.||+|++++...    +-.....|..+|...      .+++||+++..|++.
T Consensus       140 ~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~------ds~~vVKLyYsFQD~  213 (550)
T KOG0605|consen  140 LDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEV------DSPWVVKLYYSFQDK  213 (550)
T ss_pred             cccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhc------CCCcEEEEEEEecCC
Confidence            4679999999999999999999999999999999987543    234455576777663      458999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +++||||||+ ||++..+|.+.+  .+++..++.|+.+++.|++.||+.|+|||||||+|+||+..|++||+||+.+..-
T Consensus       214 ~~LYLiMEylPGGD~mTLL~~~~--~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl  291 (550)
T KOG0605|consen  214 EYLYLIMEYLPGGDMMTLLMRKD--TLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGL  291 (550)
T ss_pred             CeeEEEEEecCCccHHHHHHhcC--cCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchh
Confidence            9999999999 999999999887  6999999999999999999999999999999999999988877777777666222


Q ss_pred             CCCcccC---------CCCCceEEeecCCc--ccCC---------------CCCcccccCCCccchhhhhCCCCCCcchh
Q 015867          220 EMPFRCL---------PKSSAIKLIDFGST--AFDN---------------QNHSSIVSTRHYRAPEVILGLGWSYPCDM  273 (399)
Q Consensus       220 ~~~~~~~---------~~~~~~kl~Dfg~a--~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di  273 (399)
                      .......         ......+-.||...  ....               .-..+.+|||.|||||++.+.+|+..+|+
T Consensus       292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw  371 (550)
T KOG0605|consen  292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW  371 (550)
T ss_pred             hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence            2111100         01111223333311  0000               00124589999999999999999999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhh
Q 015867          274 WSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK  353 (399)
Q Consensus       274 wslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  353 (399)
                      ||||||+||||.|.+||.+.+..++..+|..-..                      .+.||..                 
T Consensus       372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~----------------------~l~fP~~-----------------  412 (550)
T KOG0605|consen  372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRE----------------------TLKFPEE-----------------  412 (550)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhh----------------------hccCCCc-----------------
Confidence            9999999999999999999999999998866321                      2333432                 


Q ss_pred             hhhhccchhhhhHHHHHHHHccccCCCCCCC---HHHHhCCccccCCC
Q 015867          354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLT---ARQALNHPFFRNLN  398 (399)
Q Consensus       354 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~f~~~~  398 (399)
                             ..++.+++|||.+||. ||.+|+.   ++||.+||||++++
T Consensus       413 -------~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~  452 (550)
T KOG0605|consen  413 -------VDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVD  452 (550)
T ss_pred             -------CcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCC
Confidence                   3556889999999999 9999995   89999999999985

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=2e-54  Score=369.65  Aligned_cols=278  Identities=32%  Similarity=0.542  Sum_probs=236.2

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+|...++||+|.||.||+|++..+|+.||||.++...   .......+|++.|+++.|      +||+.+++.|...+.
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h------~nIi~LiD~F~~~~~   75 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKH------PNIIELIDVFPHKSN   75 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccC------cchhhhhhhccCCCc
Confidence            47999999999999999999999999999999997543   224567789999999864      999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      +.||+||+..+|..+++...- .++...++.|+.+++.||+|||++.|+||||||.|+||                    
T Consensus        76 l~lVfEfm~tdLe~vIkd~~i-~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLi--------------------  134 (318)
T KOG0659|consen   76 LSLVFEFMPTDLEVVIKDKNI-ILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLI--------------------  134 (318)
T ss_pred             eEEEEEeccccHHHHhccccc-ccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEE--------------------
Confidence            999999999999999986543 79999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                          +.++.+||+|||+++......   ...+-|.+|+|||.+.|. .|+..+||||.|||+.||+.|.+-|.+.++.++
T Consensus       135 ----s~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQ  210 (318)
T KOG0659|consen  135 ----SSDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQ  210 (318)
T ss_pred             ----cCCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHH
Confidence                457789999999998755433   334789999999999986 699999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhh-hhccchhhhhHHHHHHHHcccc
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM-VSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      +..|++.+|.+.+..|++..+-.++                   .+...    .... .....+.++.++.||+.+||.+
T Consensus       211 L~~If~~LGTP~~~~WP~~~~lpdY-------------------~~~~~----~P~~~~~~lf~aas~d~ldLl~~m~~y  267 (318)
T KOG0659|consen  211 LSKIFRALGTPTPDQWPEMTSLPDY-------------------VKIQQ----FPKPPLNNLFPAASSDALDLLSKMLTY  267 (318)
T ss_pred             HHHHHHHcCCCCcccCccccccccH-------------------HHHhc----CCCCccccccccccHHHHHHHHhhhcc
Confidence            9999999999987765554433222                   11110    0000 0114467788889999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|+|+.|+|+|+||++.
T Consensus       268 nP~~Rita~qaL~~~yf~~~  287 (318)
T KOG0659|consen  268 NPKKRITASQALKHPYFKSL  287 (318)
T ss_pred             CchhcccHHHHhcchhhhcC
Confidence            99999999999999999974

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9.6e-56  Score=405.14  Aligned_cols=284  Identities=31%  Similarity=0.496  Sum_probs=232.8

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-h-hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-Y-RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~-~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .+-++|.++++||.|+||.||+|....+|+.||||.++.... + ...-.+|++.|++|.     .||||+++.+.+.+.
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln-----~hpniikL~Evi~d~   81 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----PHPNIIKLKEVIRDN   81 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcC-----CCCcchhhHHHhhcc
Confidence            455789999999999999999999999999999999865322 1 222345666666665     379999999999887


Q ss_pred             C-eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 N-HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~-~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      + .+|+|||||..+|+++++.+ .+.|++..++.|+.||+.||+|+|.+|+.|||+||+|||+.                
T Consensus        82 ~~~L~fVfE~Md~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~----------------  144 (538)
T KOG0661|consen   82 DRILYFVFEFMDCNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILIS----------------  144 (538)
T ss_pred             CceEeeeHHhhhhhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEec----------------
Confidence            7 99999999999999999887 55899999999999999999999999999999999999994                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                              ....+||+|||+|+....  ..+.++.|.+|+|||++... -|+.++|||++|||++|+.+-++.|.|.++.
T Consensus       145 --------~~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~  216 (538)
T KOG0661|consen  145 --------GNDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEI  216 (538)
T ss_pred             --------ccceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHH
Confidence                    366799999999987443  44778999999999998755 6899999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +++.+|.+.+|.+...-|.+..     .....-...||...              -..+ ....+.++.++.+||.+||.
T Consensus       217 Dqi~KIc~VLGtP~~~~~~eg~-----~La~~mnf~~P~~~--------------~~~l-~~L~p~~s~~~~~li~~ll~  276 (538)
T KOG0661|consen  217 DQIYKICEVLGTPDKDSWPEGY-----NLASAMNFRFPQVK--------------PSPL-KDLLPNASSEAASLIERLLA  276 (538)
T ss_pred             HHHHHHHHHhCCCccccchhHH-----HHHHHhccCCCcCC--------------CCCh-HHhCcccCHHHHHHHHHHhc
Confidence            9999999999998765444320     01111112222110              0011 12234589999999999999


Q ss_pred             cCCCCCCCHHHHhCCccccC
Q 015867          377 YDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~  396 (399)
                      +||.+||||.|+|+||||+.
T Consensus       277 WDP~kRpTA~~al~~pffq~  296 (538)
T KOG0661|consen  277 WDPDKRPTASQALQHPFFQV  296 (538)
T ss_pred             CCCccCccHHHHhcCccccc
Confidence            99999999999999999985

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.6e-54  Score=376.46  Aligned_cols=281  Identities=33%  Similarity=0.597  Sum_probs=235.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|+.+.++|+|+||.||+|+++.||+.||||.+....   .-.+-..+|+++|+.|.|      +|+|.+++.|.....
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH------~NLVnLiEVFrrkrk   75 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKH------ENLVNLIEVFRRKRK   75 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhccc------chHHHHHHHHHhcce
Confidence            46899999999999999999999999999999985432   234556778888888865      999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||+|||.-++.+-+.+... .++...++.|+.|++.|+.|||++++|||||||+||||+                   
T Consensus        76 lhLVFE~~dhTvL~eLe~~p~-G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit-------------------  135 (396)
T KOG0593|consen   76 LHLVFEYCDHTVLHELERYPN-GVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILIT-------------------  135 (396)
T ss_pred             eEEEeeecchHHHHHHHhccC-CCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEe-------------------
Confidence            999999998888888887765 699999999999999999999999999999999999994                   


Q ss_pred             cccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           .++.+||||||+|+...   ...+.++.|.+|+|||.+.+ .+|+..+||||+||++.||++|.+.|++..+.++
T Consensus       136 -----~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQ  210 (396)
T KOG0593|consen  136 -----QNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQ  210 (396)
T ss_pred             -----cCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHH
Confidence                 57789999999998644   33466789999999999998 5899999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +..|....|.+++.-..-..+.   -+..+-.++-|+...               .+ ..-.+.++.-+.||+.+||+.|
T Consensus       211 Ly~I~ktLG~L~prhq~iF~~N---~~F~Gv~lP~~~~~e---------------pL-e~k~p~~s~~~ld~~k~cL~~d  271 (396)
T KOG0593|consen  211 LYLIRKTLGNLIPRHQSIFSSN---PFFHGVRLPEPEHPE---------------PL-ERKYPKISNVLLDLLKKCLKMD  271 (396)
T ss_pred             HHHHHHHHcccCHHHHHHhccC---CceeeeecCCCCCcc---------------ch-hhhcccchHHHHHHHHHHhcCC
Confidence            9999999999987655433222   122333333333221               11 1223566778899999999999


Q ss_pred             CCCCCCHHHHhCCccccC
Q 015867          379 PSERLTARQALNHPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~  396 (399)
                      |.+|++-+|+|.||||.+
T Consensus       272 P~~R~sc~qll~H~yFd~  289 (396)
T KOG0593|consen  272 PDDRLSCEQLLHHPYFDG  289 (396)
T ss_pred             ccccccHHHHhcChHHHH
Confidence            999999999999999965

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-53  Score=385.54  Aligned_cols=259  Identities=28%  Similarity=0.506  Sum_probs=223.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .++|.+.+.||.|+||+||+|+++.++..||||.+.+.   .+..+.+..|+.+|++++      |+|||.++++...++
T Consensus         9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~------H~nIV~l~d~~~~~~   82 (429)
T KOG0595|consen    9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELK------HPNIVRLLDCIEDDD   82 (429)
T ss_pred             cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcC------CcceeeEEEEEecCC
Confidence            46799999999999999999999999999999998643   345566788999999997      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ++||||||| ||+|.+++++.+  .+++..++.++.||+.||++||+++||||||||+|||++....             
T Consensus        83 ~i~lVMEyC~gGDLs~yi~~~~--~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~-------------  147 (429)
T KOG0595|consen   83 FIYLVMEYCNGGDLSDYIRRRG--RLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTAR-------------  147 (429)
T ss_pred             eEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCC-------------
Confidence            999999999 999999999987  6999999999999999999999999999999999999975420             


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           .+....+||+|||+|+....  ...+.||++.|||||++...+|+.|+|+||+|+|+|+|++|+.||...+..+.
T Consensus       148 -----~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL  222 (429)
T KOG0595|consen  148 -----NDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETPKEL  222 (429)
T ss_pred             -----CCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCHHHH
Confidence                 01226799999999988554  34688999999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +..+.+.....|.                                               .....+..+.+|+..+|+.|
T Consensus       223 ~~~~~k~~~~~~~-----------------------------------------------~~~~~s~~~~~Ll~~ll~~~  255 (429)
T KOG0595|consen  223 LLYIKKGNEIVPV-----------------------------------------------LPAELSNPLRELLISLLQRN  255 (429)
T ss_pred             HHHHhccccccCc-----------------------------------------------hhhhccCchhhhhhHHHhcC
Confidence            8877665433221                                               11344566678999999999


Q ss_pred             CCCCCCHHHHhCCccccC
Q 015867          379 PSERLTARQALNHPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~  396 (399)
                      |.+|.+..+-+.|+++..
T Consensus       256 ~~~~~~~~~~~~~~~l~~  273 (429)
T KOG0595|consen  256 PKDRISFEDFFDHPFLAA  273 (429)
T ss_pred             ccccCchHHhhhhhhccc
Confidence            999999999888888764

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-53  Score=407.20  Aligned_cols=252  Identities=25%  Similarity=0.439  Sum_probs=224.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|.+++.||+|+||+|+++..+.+++.||||++++..    ..-.....|.+|+....     +||.+++++..|+..
T Consensus       367 l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~-----~HPFL~~L~~~fQT~  441 (694)
T KOG0694|consen  367 LDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELAN-----RHPFLVNLFSCFQTK  441 (694)
T ss_pred             ccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhc-----cCCeEeecccccccC
Confidence            468999999999999999999999999999999998633    34456777888888776     689999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +++|+||||+ ||++..+++..   .|++..++.|+..|+.||+|||++||||||||.+|||+                 
T Consensus       442 ~~l~fvmey~~Ggdm~~~~~~~---~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLL-----------------  501 (694)
T KOG0694|consen  442 EHLFFVMEYVAGGDLMHHIHTD---VFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLL-----------------  501 (694)
T ss_pred             CeEEEEEEecCCCcEEEEEecc---cccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEE-----------------
Confidence            9999999999 88865554433   59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCccc---CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAF---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             +..|++||+|||+++.   .+..++++||||.|||||++.+..|+.++|+|||||+|||||+|..||.+.++.
T Consensus       502 -------D~eGh~kiADFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEe  574 (694)
T KOG0694|consen  502 -------DTEGHVKIADFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEE  574 (694)
T ss_pred             -------cccCcEEecccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence                   5678899999999875   455678999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....|......                                                  ++..+|.++.++++++|.
T Consensus       575 e~FdsI~~d~~~--------------------------------------------------yP~~ls~ea~~il~~ll~  604 (694)
T KOG0694|consen  575 EVFDSIVNDEVR--------------------------------------------------YPRFLSKEAIAIMRRLLR  604 (694)
T ss_pred             HHHHHHhcCCCC--------------------------------------------------CCCcccHHHHHHHHHHhc
Confidence            998888664433                                                  334678889999999999


Q ss_pred             cCCCCCCC-----HHHHhCCccccCCC
Q 015867          377 YDPSERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t-----~~ell~hp~f~~~~  398 (399)
                      .||.+|+.     +.+|.+||||+.|+
T Consensus       605 k~p~kRLG~~e~d~~~i~~hpFFr~i~  631 (694)
T KOG0694|consen  605 KNPEKRLGSGERDAEDIKKHPFFRSID  631 (694)
T ss_pred             cCcccccCCCCCCchhhhhCCccccCC
Confidence            99999996     47899999999985

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3e-53  Score=391.36  Aligned_cols=280  Identities=30%  Similarity=0.481  Sum_probs=234.9

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ..+.|+.+++||+|.||.||+|++..+|+.||+|.++..   ........+|+.||+.|.|      |||+++.+...+.
T Consensus       115 ~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~H------pNIikL~eivt~~  188 (560)
T KOG0600|consen  115 RADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDH------PNIIKLEEIVTSK  188 (560)
T ss_pred             chHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCC------CcccceeeEEEec
Confidence            345799999999999999999999999999999999753   2344567789999999964      9999999988875


Q ss_pred             --CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          141 --NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       141 --~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                        ..+|||+|||..+|.-++...+- .|++.+++.|+.||+.||+|||++||+|||||.+||||                
T Consensus       189 ~~~siYlVFeYMdhDL~GLl~~p~v-kft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLi----------------  251 (560)
T KOG0600|consen  189 LSGSIYLVFEYMDHDLSGLLSSPGV-KFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILI----------------  251 (560)
T ss_pred             CCceEEEEEecccchhhhhhcCCCc-ccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEE----------------
Confidence              79999999999999999887543 69999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                              +.++.+||+|||+|.+....    .+..+-|.+|+|||.+.|. .|+.++|+||+||||.||++|++.|.+.
T Consensus       252 --------dn~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~  323 (560)
T KOG0600|consen  252 --------DNNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGR  323 (560)
T ss_pred             --------cCCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCc
Confidence                    56888999999999974433    3566789999999999987 7999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      ++.+++..|+++.|.+++..|+.. . .....                   .++.....+....+....++..+.+|+..
T Consensus       324 tEveQl~kIfklcGSP~e~~W~~~-k-LP~~~-------------------~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~  382 (560)
T KOG0600|consen  324 TEVEQLHKIFKLCGSPTEDYWPVS-K-LPHAT-------------------IFKPQQPYKRRLRETFKDFPASALDLLEK  382 (560)
T ss_pred             cHHHHHHHHHHHhCCCChhccccc-c-CCccc-------------------ccCCCCcccchHHHHhccCCHHHHHHHHH
Confidence            999999999999999998877722 1 11000                   00001111112222245678888999999


Q ss_pred             ccccCCCCCCCHHHHhCCcccc
Q 015867          374 LLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      ||.+||.+|.||.++|+|+||+
T Consensus       383 lL~ldP~kR~tA~~aL~seyF~  404 (560)
T KOG0600|consen  383 LLSLDPDKRGTASSALQSEYFT  404 (560)
T ss_pred             HhccCccccccHHHHhcCcccc
Confidence            9999999999999999999994

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.8e-53  Score=380.35  Aligned_cols=279  Identities=28%  Similarity=0.409  Sum_probs=231.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .+|++++.||.|.-|+||+|+...++..+|+|++.+..    ..-.+...|.+||+.+.      ||.++.+|..|+.+.
T Consensus        77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lD------HPFlPTLYa~fet~~  150 (459)
T KOG0610|consen   77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLD------HPFLPTLYASFETDK  150 (459)
T ss_pred             HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcC------CCccchhhheeeccc
Confidence            47899999999999999999999999999999997643    23345667888998886      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      +.||||||| ||+|..+++++..+.|++..++.|+.+++.||+|||-+|||+|||||+||||.++|++.|.||..+..-.
T Consensus       151 ~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~  230 (459)
T KOG0610|consen  151 YSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCP  230 (459)
T ss_pred             eeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence            999999999 9999999999998899999999999999999999999999999999999999999999999985442211


Q ss_pred             C-C--cccC-----CCCCceE---E----------------eecCC--------cccCCCCCcccccCCCccchhhhhCC
Q 015867          221 M-P--FRCL-----PKSSAIK---L----------------IDFGS--------TAFDNQNHSSIVSTRHYRAPEVILGL  265 (399)
Q Consensus       221 ~-~--~~~~-----~~~~~~k---l----------------~Dfg~--------a~~~~~~~~~~~gt~~y~aPE~~~~~  265 (399)
                      . +  ....     .....+.   +                .|.+.        |...+....+++||-.|.|||++.|.
T Consensus       231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~  310 (459)
T KOG0610|consen  231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE  310 (459)
T ss_pred             CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence            1 0  0000     0000000   1                12221        11122334678999999999999999


Q ss_pred             CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHH
Q 015867          266 GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA  345 (399)
Q Consensus       266 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  345 (399)
                      +.+.++|+|+|||++|||+.|..||.+.+..+++..|......+|..                                 
T Consensus       311 GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~---------------------------------  357 (459)
T KOG0610|consen  311 GHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEE---------------------------------  357 (459)
T ss_pred             CCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCC---------------------------------
Confidence            99999999999999999999999999999999998887654444432                                 


Q ss_pred             HHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCC----HHHHhCCccccCCC
Q 015867          346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT----ARQALNHPFFRNLN  398 (399)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~ell~hp~f~~~~  398 (399)
                                     +.++..++|||+++|.+||.+|+.    |+||.+||||++++
T Consensus       358 ---------------~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVn  399 (459)
T KOG0610|consen  358 ---------------PEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVN  399 (459)
T ss_pred             ---------------CcchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCC
Confidence                           356788999999999999999998    99999999999986

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.6e-52  Score=390.71  Aligned_cols=254  Identities=32%  Similarity=0.522  Sum_probs=222.3

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc----h--hhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----R--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      ....++|.+.+.||+|+||+|+.|++..++..||+|++...    .  .......+|+.+++.+.+     ||||+++++
T Consensus        13 ~~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~-----HpnI~~l~e   87 (370)
T KOG0583|consen   13 QLSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRS-----HPNIIRLLE   87 (370)
T ss_pred             ccccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhcc-----CCCEeEEEE
Confidence            34567899999999999999999999999999999977542    1  223455578888888872     689999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      ++.....+|+||||+ ||+|++++.+.+  ++.+..++.+++||++|++|||++||+||||||+|||++           
T Consensus        88 v~~t~~~~~ivmEy~~gGdL~~~i~~~g--~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld-----------  154 (370)
T KOG0583|consen   88 VFATPTKIYIVMEYCSGGDLFDYIVNKG--RLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLD-----------  154 (370)
T ss_pred             EEecCCeEEEEEEecCCccHHHHHHHcC--CCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEec-----------
Confidence            999999999999999 899999999855  699999999999999999999999999999999999994           


Q ss_pred             CCCCCCCCcccCCCC-CceEEeecCCcccC---CCCCcccccCCCccchhhhhCCC-CC-CcchhHHHHHHHHHHHhCCC
Q 015867          215 RSSSGEMPFRCLPKS-SAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLG-WS-YPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~-~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~-~~-~~~DiwslG~il~ell~g~~  288 (399)
                                   .+ +.+||+|||++...   .....+.+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.
T Consensus       155 -------------~~~~~~Kl~DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~  221 (370)
T KOG0583|consen  155 -------------GNEGNLKLSDFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRL  221 (370)
T ss_pred             -------------CCCCCEEEeccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCC
Confidence                         45 88999999998866   34557889999999999999987 85 88999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhh-hhHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA-RSTL  367 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~  367 (399)
                      ||...+.......|.+....+|.                                                  .+ |.++
T Consensus       222 PF~d~~~~~l~~ki~~~~~~~p~--------------------------------------------------~~~S~~~  251 (370)
T KOG0583|consen  222 PFDDSNVPNLYRKIRKGEFKIPS--------------------------------------------------YLLSPEA  251 (370)
T ss_pred             CCCCccHHHHHHHHhcCCccCCC--------------------------------------------------CcCCHHH
Confidence            99998887777777665544443                                                  33 7888


Q ss_pred             HHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          368 TDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ++||.+||..||.+|+|+.++++||||+.
T Consensus       252 ~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  252 RSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             HHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            99999999999999999999999999995

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.5e-50  Score=397.78  Aligned_cols=314  Identities=39%  Similarity=0.715  Sum_probs=240.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC-CeE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-NHI  143 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-~~~  143 (399)
                      .++|++.+.||+|+||+||+|++..+++.||||+++...........|+++++.+.+.....+.+++.++++|... .++
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~~~~  207 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNETGHM  207 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCCceE
Confidence            5789999999999999999999999999999999976545555667799999999988777888899999988764 689


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||+++|++|.+++.+.+  .+++..+..|+.||+.||+|||+ .|||||||||+|||+..++.........       
T Consensus       208 ~iv~~~~g~~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~-------  278 (467)
T PTZ00284        208 CIVMPKYGPCLLDWIMKHG--PFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNR-------  278 (467)
T ss_pred             EEEEeccCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccc-------
Confidence            9999999999999998765  69999999999999999999998 5999999999999997654211110000       


Q ss_pred             cccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                       ........+||+|||.+..........+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+.+..+
T Consensus       279 -~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i  357 (467)
T PTZ00284        279 -ALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLM  357 (467)
T ss_pred             -ccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence             0012344699999998876655566788999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCHHHHHHhcccc-cccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCC
Q 015867          303 ERALGPLPEHMIRRASRGT-EKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE  381 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  381 (399)
                      ....+.+|..+........ ..++.........   ............   ..   ......+..+.|||.+||++||.+
T Consensus       358 ~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~---~~---~~~~~~~~~~~dli~~mL~~dP~~  428 (467)
T PTZ00284        358 EKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPC---TDPKHLARIARA---RP---VREVIRDDLLCDLIYGLLHYDRQK  428 (467)
T ss_pred             HHHcCCCCHHHHhhccchhHHHHhhhccccccc---CCHHHHHhhhcc---cc---hhhhhchHHHHHHHHHhCCcChhh
Confidence            9999999987765432110 1111111111000   000011000000   00   000112456889999999999999


Q ss_pred             CCCHHHHhCCccccCC
Q 015867          382 RLTARQALNHPFFRNL  397 (399)
Q Consensus       382 R~t~~ell~hp~f~~~  397 (399)
                      |||++|+|+||||.+.
T Consensus       429 R~ta~e~L~Hp~~~~~  444 (467)
T PTZ00284        429 RLNARQMTTHPYVLKY  444 (467)
T ss_pred             CCCHHHHhcCcccccc
Confidence            9999999999999874

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=9.2e-52  Score=363.69  Aligned_cols=283  Identities=30%  Similarity=0.486  Sum_probs=232.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--  139 (399)
                      .+.|+.+.+|++|+||.||+|++..+++.||+|.++...   ...-...+|+.+|..++      |+|||.+-.....  
T Consensus        75 v~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~------H~NIV~vkEVVvG~~  148 (419)
T KOG0663|consen   75 VEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKAR------HPNIVEVKEVVVGSN  148 (419)
T ss_pred             HHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcC------CCCeeeeEEEEeccc
Confidence            356999999999999999999999999999999996432   23344567888887765      5999999887764  


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          140 RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       140 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      -+.+|+|||||..+|.+++...+. +|...+++.++.|++.||+|||...|+||||||+|+|+.                
T Consensus       149 ~d~iy~VMe~~EhDLksl~d~m~q-~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~----------------  211 (419)
T KOG0663|consen  149 MDKIYIVMEYVEHDLKSLMETMKQ-PFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLS----------------  211 (419)
T ss_pred             cceeeeeHHHHHhhHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeec----------------
Confidence            357999999999999999998774 799999999999999999999999999999999999994                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                              ..+.+||+|||+|+..+..   .+..+-|.+|+|||.+.+. .|++++||||+|||+.||+++.+.|.+..+
T Consensus       212 --------~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE  283 (419)
T KOG0663|consen  212 --------HKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSE  283 (419)
T ss_pred             --------cCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCch
Confidence                    4677999999999987766   4567889999999999986 699999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccch-hhhhHHHHHHHHc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD-RARSTLTDLLHGL  374 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~li~~~  374 (399)
                      .+++.+|++..+.+.+..|+.........     ...++...           ...+.   ..+.. .++....+|++.+
T Consensus       284 ~dQl~~If~llGtPte~iwpg~~~lp~~k-----~~~f~~~p-----------yn~lr---~kF~~~~lse~g~~Lln~l  344 (419)
T KOG0663|consen  284 IDQLDKIFKLLGTPSEAIWPGYSELPAVK-----KMTFSEHP-----------YNNLR---KKFGALSLSEQGFDLLNKL  344 (419)
T ss_pred             HHHHHHHHHHhCCCccccCCCccccchhh-----ccccCCCC-----------chhhh---hhccccccchhHHHHHHHH
Confidence            99999999999999887665543322110     00011100           00111   11111 1567888999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      |.+||.+|.||+|.|+|+||.+.
T Consensus       345 lt~dP~kR~tA~~~L~h~~F~e~  367 (419)
T KOG0663|consen  345 LTYDPGKRITAEDGLKHEYFRET  367 (419)
T ss_pred             hccCccccccHHHhhcccccccC
Confidence            99999999999999999999873

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-51  Score=365.63  Aligned_cols=284  Identities=30%  Similarity=0.531  Sum_probs=236.5

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEec---chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      -.+..+|..++.||.|+||.|..|.+..+|+.||||.+..   .....++..+|+++|++++      |+||+.+.+.+.
T Consensus        18 ~~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~------HeNIi~l~di~~   91 (359)
T KOG0660|consen   18 FEIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLR------HENIIGLLDIFR   91 (359)
T ss_pred             EeccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhc------CCCcceEEeecc
Confidence            3445678889999999999999999999999999998862   2233455677888888876      489999999886


Q ss_pred             c-----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          139 Y-----RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       139 ~-----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      .     -+.+|+|+|+|+.+|.+.++++.  .++...+..++.||+.||.|+|+.+|+||||||+|+|+           
T Consensus        92 p~~~~~f~DvYiV~elMetDL~~iik~~~--~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~-----------  158 (359)
T KOG0660|consen   92 PPSRDKFNDVYLVFELMETDLHQIIKSQQ--DLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLL-----------  158 (359)
T ss_pred             cccccccceeEEehhHHhhHHHHHHHcCc--cccHHHHHHHHHHHHHhcchhhcccccccccchhheee-----------
Confidence            5     35789999999999999999876  59999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCC-----CCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-----QNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGE  287 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~  287 (399)
                                   +.+..+||+|||+|+...     ...+.++-|.+|+|||++.. ..|+.++||||+|||+.||++|+
T Consensus       159 -------------n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gk  225 (359)
T KOG0660|consen  159 -------------NADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGK  225 (359)
T ss_pred             -------------ccCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCC
Confidence                         456778999999998763     33467788999999999865 58999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh-hhhccchhhhhH
Q 015867          288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN-MVSLHVDRARST  366 (399)
Q Consensus       288 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~  366 (399)
                      +.|.+.+..+++..|....|.+++.....+.+....-                    .++..+.... ......+..++.
T Consensus       226 plFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~--------------------yi~slp~~p~~~f~~~fp~a~p~  285 (359)
T KOG0660|consen  226 PLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARP--------------------YIKSLPQIPKQPFSSIFPNANPL  285 (359)
T ss_pred             CCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHH--------------------HHHhCCCCCCCCHHHHcCCCCHH
Confidence            9999999999999999999999988877765322211                    1111111111 112334588899


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +.||+.+||..||.+|+|++|+|+||||...
T Consensus       286 AidLlekmL~fdP~kRita~eAL~hPYl~~~  316 (359)
T KOG0660|consen  286 AIDLLEKMLVFDPKKRITAEEALAHPYLAPY  316 (359)
T ss_pred             HHHHHHHHhccCccccCCHHHHhcChhhhhh
Confidence            9999999999999999999999999999875

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=3e-53  Score=358.41  Aligned_cols=260  Identities=27%  Similarity=0.438  Sum_probs=227.4

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEec---chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+.+.|++.+.||+|.|+.|+++.+..+|+.||+|++..   .......+.+|+.|-+.|+      ||||+++.+.+.
T Consensus         7 ~~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~Lq------HP~IvrL~~ti~   80 (355)
T KOG0033|consen    7 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ------HPNIVRLHDSIQ   80 (355)
T ss_pred             cccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcC------CCcEeehhhhhc
Confidence            4567789999999999999999999999999999999853   2234456777888888886      499999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      ...+.|||+|++ |++|..-|-...  -+++..+..+++||+++|.|+|.+||||||+||.|+++.+.            
T Consensus        81 ~~~~~ylvFe~m~G~dl~~eIV~R~--~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK------------  146 (355)
T KOG0033|consen   81 EESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASK------------  146 (355)
T ss_pred             ccceeEEEEecccchHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeec------------
Confidence            999999999999 999987665543  48999999999999999999999999999999999999653            


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                               +....+||+|||++...+  ......+|||.|||||++...+|+..+|||+.|||||-|+.|.+||.+.+.
T Consensus       147 ---------~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~  217 (355)
T KOG0033|consen  147 ---------AKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ  217 (355)
T ss_pred             ---------cCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH
Confidence                     456779999999987644  334567899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+.+.+|.+....+|.                                              +.++.+++++++||++||
T Consensus       218 ~rlye~I~~g~yd~~~----------------------------------------------~~w~~is~~Ak~LvrrML  251 (355)
T KOG0033|consen  218 HRLYEQIKAGAYDYPS----------------------------------------------PEWDTVTPEAKSLIRRML  251 (355)
T ss_pred             HHHHHHHhccccCCCC----------------------------------------------cccCcCCHHHHHHHHHHh
Confidence            9999999877655443                                              334678899999999999


Q ss_pred             ccCCCCCCCHHHHhCCccccC
Q 015867          376 RYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ..||.+|+|+.|+|+|||+.+
T Consensus       252 ~~dP~kRIta~EAL~HpWi~~  272 (355)
T KOG0033|consen  252 TVNPKKRITADEALKHPWICN  272 (355)
T ss_pred             ccChhhhccHHHHhCCchhcc
Confidence            999999999999999999986

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-51  Score=385.71  Aligned_cols=252  Identities=27%  Similarity=0.459  Sum_probs=221.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhh-HHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-DAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ..|....+||+|+.|.||.|....+++.||||.+....... .-..+|+.+++...      |+|||++++.|...+.++
T Consensus       273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~------H~NiVnfl~Sylv~deLW  346 (550)
T KOG0578|consen  273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLH------HPNIVNFLDSYLVGDELW  346 (550)
T ss_pred             hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhcc------chHHHHHHHHhcccceeE
Confidence            46999999999999999999999999999999997654433 44667999998886      499999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ ||+|.+++....   +++.++..|+++++.||+|||.+||+|||||.+|||++                    
T Consensus       347 VVMEym~ggsLTDvVt~~~---~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~--------------------  403 (550)
T KOG0578|consen  347 VVMEYMEGGSLTDVVTKTR---MTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLT--------------------  403 (550)
T ss_pred             EEEeecCCCchhhhhhccc---ccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEec--------------------
Confidence            999999 999999998765   99999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                          .++.+||+|||++.....   ...+.+||++|||||+.....|++++||||||++++||+-|++||-..+....+.
T Consensus       404 ----~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~PlrAly  479 (550)
T KOG0578|consen  404 ----MDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY  479 (550)
T ss_pred             ----cCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHHHHH
Confidence                566799999999876443   3578899999999999999999999999999999999999999999888877777


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .|.....+                                               ....++.+|..++||+.+||+.|+.
T Consensus       480 LIa~ng~P-----------------------------------------------~lk~~~klS~~~kdFL~~cL~~dv~  512 (550)
T KOG0578|consen  480 LIATNGTP-----------------------------------------------KLKNPEKLSPELKDFLDRCLVVDVE  512 (550)
T ss_pred             HHhhcCCC-----------------------------------------------CcCCccccCHHHHHHHHHHhhcchh
Confidence            76543211                                               1234467899999999999999999


Q ss_pred             CCCCHHHHhCCccccCC
Q 015867          381 ERLTARQALNHPFFRNL  397 (399)
Q Consensus       381 ~R~t~~ell~hp~f~~~  397 (399)
                      +|++|.|||+||||+..
T Consensus       513 ~RasA~eLL~HpFl~~a  529 (550)
T KOG0578|consen  513 QRASAKELLEHPFLKMA  529 (550)
T ss_pred             cCCCHHHHhcChhhhhc
Confidence            99999999999999754

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.5e-51  Score=386.88  Aligned_cols=249  Identities=31%  Similarity=0.551  Sum_probs=222.9

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      -|++.+.||.|+-|.|-+|++..||+..|||++.+.    .........|+-+++.+.|      |||+.+|+.|++..+
T Consensus        13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~H------pnVl~LydVwe~~~~   86 (786)
T KOG0588|consen   13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEH------PNVLRLYDVWENKQH   86 (786)
T ss_pred             ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcC------CCeeeeeeeeccCce
Confidence            499999999999999999999999999999999653    2234556779999999875      999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+|.||+ ||.|++++.+++  ++++..+..++.||+.|+.|||..+|+|||+||+|+|++                  
T Consensus        87 lylvlEyv~gGELFdylv~kG--~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd------------------  146 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKG--PLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLD------------------  146 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhh------------------
Confidence            99999999 999999999988  699999999999999999999999999999999999984                  


Q ss_pred             CcccCCCCCceEEeecCCcccC--CCCCcccccCCCccchhhhhCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFD--NQNHSSIVSTRHYRAPEVILGLGWS-YPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~--~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                            ....+||+|||+|...  +....+.||++.|+|||++.|.+|+ .++||||.|||||.||||++||++.+-...
T Consensus       147 ------~~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNir~L  220 (786)
T KOG0588|consen  147 ------VKNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNIRVL  220 (786)
T ss_pred             ------cccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccHHHH
Confidence                  4455999999998763  3345788999999999999999875 789999999999999999999998888888


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +.+++++....|                                                  ..++.++++||.+||.+|
T Consensus       221 LlKV~~G~f~MP--------------------------------------------------s~Is~eaQdLLr~ml~VD  250 (786)
T KOG0588|consen  221 LLKVQRGVFEMP--------------------------------------------------SNISSEAQDLLRRMLDVD  250 (786)
T ss_pred             HHHHHcCcccCC--------------------------------------------------CcCCHHHHHHHHHHhccC
Confidence            888887765555                                                  356889999999999999


Q ss_pred             CCCCCCHHHHhCCccccCC
Q 015867          379 PSERLTARQALNHPFFRNL  397 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~  397 (399)
                      |++|+|.+||+.|||+.+-
T Consensus       251 p~~RiT~~eI~kHP~l~g~  269 (786)
T KOG0588|consen  251 PSTRITTEEILKHPFLSGY  269 (786)
T ss_pred             ccccccHHHHhhCchhhcC
Confidence            9999999999999999863

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=2.1e-51  Score=382.92  Aligned_cols=249  Identities=32%  Similarity=0.534  Sum_probs=220.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|.+.+.||+|+||.||+|+.+.+.+.||||.+.+..   +.-+....|++|++.++|      |||+.++++|+...+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkH------pniv~m~esfEt~~~   75 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKH------PNIVEMLESFETSAH   75 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCC------cchhhHHHhhcccce
Confidence            46889999999999999999999999999999996533   334557789999999875      999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      +++|.||+.|+|+.++...+  .+++..++.++.|++.||.|||+.+|.|||+||.|||+                    
T Consensus        76 ~~vVte~a~g~L~~il~~d~--~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl--------------------  133 (808)
T KOG0597|consen   76 LWVVTEYAVGDLFTILEQDG--KLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILL--------------------  133 (808)
T ss_pred             EEEEehhhhhhHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeee--------------------
Confidence            99999999669999999887  69999999999999999999999999999999999998                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                          +.++.+|+||||+|+.....+   +...|||.|||||+..+.+|+..+|+||||||+|||.+|++||-...-....
T Consensus       134 ----~~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv  209 (808)
T KOG0597|consen  134 ----EKGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARSITQLV  209 (808)
T ss_pred             ----cCCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence                678899999999998755543   4567999999999999999999999999999999999999999776665555


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..|......                        |                          +.+.+..+.+|+..+|..||
T Consensus       210 ~~I~~d~v~------------------------~--------------------------p~~~S~~f~nfl~gLL~kdP  239 (808)
T KOG0597|consen  210 KSILKDPVK------------------------P--------------------------PSTASSSFVNFLQGLLIKDP  239 (808)
T ss_pred             HHHhcCCCC------------------------C--------------------------cccccHHHHHHHHHHhhcCh
Confidence            555443222                        2                          24678889999999999999


Q ss_pred             CCCCCHHHHhCCccccC
Q 015867          380 SERLTARQALNHPFFRN  396 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~  396 (399)
                      .+|+|-.+++.|||.++
T Consensus       240 ~~RltW~~Ll~HpF~k~  256 (808)
T KOG0597|consen  240 AQRLTWTDLLGHPFWKG  256 (808)
T ss_pred             hhcccHHHHhcChHHhh
Confidence            99999999999999986

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.7e-52  Score=358.35  Aligned_cols=241  Identities=30%  Similarity=0.472  Sum_probs=208.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEec---chhhhHHHHHHHHHHHHhhhcCCCCCcceeeece-eeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN-WFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~-~~~~~~  141 (399)
                      .+|+|+++||.|+||+||++.+..+|+.+|.|.++-   ....+.....|+.+|+.|+|      ||||+.++ .|..++
T Consensus        19 ~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~H------pNIVqYy~~~f~~~~   92 (375)
T KOG0591|consen   19 ADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNH------PNIVQYYAHSFIEDN   92 (375)
T ss_pred             HHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCC------chHHHHHHHhhhccc
Confidence            469999999999999999999999999999999863   34556677889999999865      99999998 555555


Q ss_pred             e-EEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHH--CC--ccccCCCCCcEEEeecccccCCCC
Q 015867          142 H-ICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHD--LR--LIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       142 ~-~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~--~g--ivH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      . ++|||||| +|+|.+.++..  ..+.+++..++.++.|++.||.+||+  ..  |+||||||.||++           
T Consensus        93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl-----------  161 (375)
T KOG0591|consen   93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFL-----------  161 (375)
T ss_pred             hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEE-----------
Confidence            4 99999999 99999999753  33479999999999999999999999  44  9999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                                   +.++.+||+|||++++.....   .+++|||.||+||.+.+.+|++++||||+||++|||..-++||
T Consensus       162 -------------~~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF  228 (375)
T KOG0591|consen  162 -------------TANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPF  228 (375)
T ss_pred             -------------cCCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCc
Confidence                         567889999999998865543   5789999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCC-CCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          291 QTHENLEHLAMMERALGP-LPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      .+.+-.+.-.+|.+...+ +|.                                                 .-+|.++..
T Consensus       229 ~g~n~~~L~~KI~qgd~~~~p~-------------------------------------------------~~YS~~l~~  259 (375)
T KOG0591|consen  229 YGDNLLSLCKKIEQGDYPPLPD-------------------------------------------------EHYSTDLRE  259 (375)
T ss_pred             ccccHHHHHHHHHcCCCCCCcH-------------------------------------------------HHhhhHHHH
Confidence            999877777777665332 222                                                 346888999


Q ss_pred             HHHHccccCCCCCCCH
Q 015867          370 LLHGLLRYDPSERLTA  385 (399)
Q Consensus       370 li~~~L~~dP~~R~t~  385 (399)
                      +|..|+..||..||+.
T Consensus       260 li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  260 LINMCIAVDPEQRPDT  275 (375)
T ss_pred             HHHHHccCCcccCCCc
Confidence            9999999999999985

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=3.4e-50  Score=359.69  Aligned_cols=283  Identities=32%  Similarity=0.527  Sum_probs=236.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcc-eeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSH-CVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~-iv~~~~~~~~~~  141 (399)
                      ..|..+++||+|+||+||+|+...+|+.||+|.++....   ......+|+.+++.++|      +| |+.+++++...+
T Consensus        11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~------~~~iv~L~dv~~~~~   84 (323)
T KOG0594|consen   11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSH------ANHIVRLHDVIHTSN   84 (323)
T ss_pred             HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCC------CcceEEEEeeeeecc
Confidence            458888999999999999999999999999999986533   34556789999999976      55 999999998876


Q ss_pred             ------eEEEEEccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          142 ------HICIVFEKLGPSLFDFLKRNKY--CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       142 ------~~~lv~e~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                            .+++|+||+.-+|..++.....  ..++...++.++.||+.||+|||++||+||||||.||||           
T Consensus        85 ~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi-----------  153 (323)
T KOG0594|consen   85 NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLI-----------  153 (323)
T ss_pred             cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEE-----------
Confidence                  8999999999999999987653  358889999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                   +..+.+||+|||+|....-.   ..+.++|.+|+|||++.+. .|+..+||||+|||++||+++++.
T Consensus       154 -------------~~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~L  220 (323)
T KOG0594|consen  154 -------------SSSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPL  220 (323)
T ss_pred             -------------CCCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCC
Confidence                         45778999999998764422   3566799999999999987 799999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+..+.+++.+|.+..+.+....|+.+.+...+..      .||......              ......+..+.+..+
T Consensus       221 FpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~------~f~~~~~~~--------------~l~~~~~~~~~~~~d  280 (323)
T KOG0594|consen  221 FPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKA------PFPKWPGPK--------------DLSSILPKLDPDGIE  280 (323)
T ss_pred             CCCCcHHHHHHHHHHHcCCCCccCCCCccccccccc------cCcCCCCcc--------------chHHhccccCccHHH
Confidence            999999999999999999999887776655444332      222211011              111222344467889


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ++.+||+.||.+|.|++.+|+||||..+.
T Consensus       281 ll~~~L~y~p~~R~Sa~~al~h~yf~~~~  309 (323)
T KOG0594|consen  281 LLSKLLQYDPAKRISAKGALTHPYFSELP  309 (323)
T ss_pred             HHHHHhccCcccCcCHHHHhcChhhcccc
Confidence            99999999999999999999999999874

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.2e-50  Score=360.44  Aligned_cols=278  Identities=30%  Similarity=0.575  Sum_probs=229.4

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC-----C
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-----N  141 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-----~  141 (399)
                      .|.-.+.+|.|+||.||.|....+++.||||.+-.....   -..|.++++.+.      |||||++..+|...     -
T Consensus        25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~---knrEl~im~~l~------HpNIV~L~~~f~~~~~~d~~   95 (364)
T KOG0658|consen   25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY---KNRELQIMRKLD------HPNIVRLLYFFSSSTESDEV   95 (364)
T ss_pred             EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCc---CcHHHHHHHhcC------CcCeeeEEEEEEecCCCchh
Confidence            589999999999999999999999999999988554332   345889998664      59999998887642     2


Q ss_pred             eEEEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          142 HICIVFEKLGPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       142 ~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..+||||+..+|.++++..  ....++...++-|..||+.||.|||+.||+||||||.|+|++.               
T Consensus        96 ~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~---------------  160 (364)
T KOG0658|consen   96 YLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDP---------------  160 (364)
T ss_pred             HHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcC---------------
Confidence            56799999999999999852  1236999999999999999999999999999999999999953               


Q ss_pred             CCCcccCCCCCceEEeecCCcccC--CCCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFD--NQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                              ..+.+||||||+|+..  +....++..|..|+|||.+.|. .|+.+.||||.||++.||+.|++.|.+.+..
T Consensus       161 --------~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~  232 (364)
T KOG0658|consen  161 --------DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV  232 (364)
T ss_pred             --------CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH
Confidence                    4688999999999873  3444678899999999999986 7999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +++..|.+..|.++.+-+...+......       .+|.          +....+.+    ......++++.+|+.++|+
T Consensus       233 dQL~eIik~lG~Pt~e~I~~mn~~y~~~-------~~p~----------ik~~~~~~----~~~~~~~~d~~dll~~~L~  291 (364)
T KOG0658|consen  233 DQLVEIIKVLGTPTREDIKSMNPNYTEF-------KFPQ----------IKAHPWHK----VFFKRLPPDALDLLSKLLQ  291 (364)
T ss_pred             HHHHHHHHHhCCCCHHHHhhcCcccccc-------cCcc----------ccccccee----ecccCCCHHHHHHHHHHhc
Confidence            9999999999999988777654332110       0110          00000000    2345678899999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCC
Q 015867          377 YDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ++|.+|.++.|++.||||..+
T Consensus       292 Y~P~~R~~~~~~l~h~fFdel  312 (364)
T KOG0658|consen  292 YSPSKRLSALEALAHPFFDEL  312 (364)
T ss_pred             cChhhcCCHHHHhcchhhHHh
Confidence            999999999999999999876

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-49  Score=373.73  Aligned_cols=263  Identities=34%  Similarity=0.561  Sum_probs=231.0

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      ...+...|++.+.||.|.||.||+|..+.+|+.+|+|++.+...    .......|+.+|+.+..     ||||+.+++.
T Consensus        30 ~~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~-----hpniv~l~~~  104 (382)
T KOG0032|consen   30 SEDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSG-----HPNIVQLKDA  104 (382)
T ss_pred             cccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccC-----CCCEEEEEEE
Confidence            35566789999999999999999999999999999999975432    23578889999999973     7999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      |++....++|||+| ||.|++.+...   .+++..+..++.|++.++.|||+.|||||||||+|+|+....         
T Consensus       105 ~e~~~~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~---------  172 (382)
T KOG0032|consen  105 FEDPDSVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKD---------  172 (382)
T ss_pred             EEcCCeEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeecccc---------
Confidence            99999999999999 99999999876   299999999999999999999999999999999999996532         


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                 ..++.++++|||++.....  .....+||+.|+|||++.+.+|+..+||||+|+++|.|++|.+||.+.
T Consensus       173 -----------~~~~~ik~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~  241 (382)
T KOG0032|consen  173 -----------EGSGRIKLIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGE  241 (382)
T ss_pred             -----------CCCCcEEEeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCC
Confidence                       2346899999999988665  456789999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +.......|......++                                              ...++.++..+.+||.+
T Consensus       242 ~~~~~~~~i~~~~~~f~----------------------------------------------~~~w~~is~~akd~i~~  275 (382)
T KOG0032|consen  242 TEFEIFLAILRGDFDFT----------------------------------------------SEPWDDISESAKDFIRK  275 (382)
T ss_pred             ChhHHHHHHHcCCCCCC----------------------------------------------CCCccccCHHHHHHHHH
Confidence            98888776665433222                                              23445778999999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||..||.+|+|+.++|+|||+++.
T Consensus       276 ll~~dp~~R~ta~~~L~HpWi~~~  299 (382)
T KOG0032|consen  276 LLEFDPRKRLTAAQALQHPWIKSI  299 (382)
T ss_pred             hcccCcccCCCHHHHhcCccccCC
Confidence            999999999999999999999875

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.9e-50  Score=340.59  Aligned_cols=257  Identities=23%  Similarity=0.412  Sum_probs=224.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .++|++.+.||+|-||.||+|+.++++..||+|++.+...  .....|.++.+++....+..||||+++|++|.++...|
T Consensus        21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi--~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riy   98 (281)
T KOG0580|consen   21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQI--LKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIY   98 (281)
T ss_pred             hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHH--HHhcchhhhhheeEeecccCCccHHhhhhheeccceeE
Confidence            3579999999999999999999999999999999976432  12222334444444445556799999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      |++||. .|+|+..++..+...+++..+..|+.|++.||.|+|.++++||||||+|+|+                     
T Consensus        99 LilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLl---------------------  157 (281)
T KOG0580|consen   99 LILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLL---------------------  157 (281)
T ss_pred             EEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhcc---------------------
Confidence            999999 9999999997766689999999999999999999999999999999999998                     


Q ss_pred             ccCCCCCceEEeecCCcccC-CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                         +..+.+||+|||-+... .....+.|||..|.+||+..+..++..+|+|++|++.||++.|.+||......+++.+|
T Consensus       158 ---g~~~~lkiAdfGwsV~~p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI  234 (281)
T KOG0580|consen  158 ---GSAGELKIADFGWSVHAPSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRI  234 (281)
T ss_pred             ---CCCCCeeccCCCceeecCCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHH
Confidence               45678999999987765 44567899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      .+....+|                                                  ..++..+.|||.+||..||.+|
T Consensus       235 ~k~~~~~p--------------------------------------------------~~is~~a~dlI~~ll~~~p~~r  264 (281)
T KOG0580|consen  235 RKVDLKFP--------------------------------------------------STISGGAADLISRLLVKNPIER  264 (281)
T ss_pred             HHccccCC--------------------------------------------------cccChhHHHHHHHHhccCcccc
Confidence            88765544                                                  3567788999999999999999


Q ss_pred             CCHHHHhCCccccCC
Q 015867          383 LTARQALNHPFFRNL  397 (399)
Q Consensus       383 ~t~~ell~hp~f~~~  397 (399)
                      .+..|++.|||....
T Consensus       265 ~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  265 LALTEVMDHPWIVAN  279 (281)
T ss_pred             ccHHHHhhhHHHHhc
Confidence            999999999998764

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=8.9e-49  Score=363.20  Aligned_cols=278  Identities=32%  Similarity=0.508  Sum_probs=224.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||.|+||.||+|++..+++.||+|+++...  ........|+.+++.+.      |+||+++++++.+++..
T Consensus         5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~   78 (288)
T cd07871           5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLK------HANIVTLHDIIHTERCL   78 (288)
T ss_pred             ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCC------CCCEeeEEEEEcCCCeE
Confidence            46999999999999999999999999999999986432  22345667888888775      59999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||+.++|.+++...+. .+++..+..++.||+.||+|||++||+||||||+|||++                    
T Consensus        79 ~lv~e~~~~~l~~~l~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~--------------------  137 (288)
T cd07871          79 TLVFEYLDSDLKQYLDNCGN-LMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN--------------------  137 (288)
T ss_pred             EEEEeCCCcCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC--------------------
Confidence            99999997799999876543 588999999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                          .++.+||+|||++.....   ......||+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+.+
T Consensus       138 ----~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~  213 (288)
T cd07871         138 ----EKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEEL  213 (288)
T ss_pred             ----CCCCEEECcCcceeeccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                466799999998865322   2234578999999999876 56899999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+....+.++...++.........  .   ...|...               ........+.++.++.+||.+||+.||
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~---------------~~~~~~~~~~~~~~~~dll~~mL~~dp  273 (288)
T cd07871         214 HLIFRLLGTPTEETWPGITSNEEFR--S---YLFPQYR---------------AQPLINHAPRLDTDGIDLLSSLLLYET  273 (288)
T ss_pred             HHHHHHhCCCChHHhhccccchhhh--c---cccCccC---------------CCchHHhCCCCCHHHHHHHHHhcCcCc
Confidence            9999998888887766543221100  0   0001000               000011224567889999999999999


Q ss_pred             CCCCCHHHHhCCccc
Q 015867          380 SERLTARQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~~ell~hp~f  394 (399)
                      .+|||++|+++||||
T Consensus       274 ~~R~t~~~~l~hp~f  288 (288)
T cd07871         274 KSRISAEAALRHSYF  288 (288)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-50  Score=364.54  Aligned_cols=254  Identities=33%  Similarity=0.489  Sum_probs=208.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhh-hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC--e
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY-RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN--H  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~  142 (399)
                      .+|...+.||+|+||.||++.+..+|..+|||.+...... .+.+..|+.+|..+.      |||||+.++......  .
T Consensus        17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~------~p~IV~~~G~~~~~~~~~   90 (313)
T KOG0198|consen   17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLN------HPNIVQYYGSSSSRENDE   90 (313)
T ss_pred             chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCC------CCCEEeeCCccccccCee
Confidence            3588999999999999999999999999999998754221 355788999999886      499999999755444  7


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ++++|||+ +|+|.+++.+.+. .+++..++.+.+||+.||.|||++||||+||||+|||++.                 
T Consensus        91 ~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~-----------------  152 (313)
T KOG0198|consen   91 YNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDP-----------------  152 (313)
T ss_pred             eEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeC-----------------
Confidence            99999999 9999999999876 7999999999999999999999999999999999999942                 


Q ss_pred             CcccCCCCCceEEeecCCcccCC------CCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC-
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDN------QNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTH-  293 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~-  293 (399)
                            .++.+||+|||++....      .......||+.|||||++.+. ..++++|||||||++.||+||..||... 
T Consensus       153 ------~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~  226 (313)
T KOG0198|consen  153 ------SNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFF  226 (313)
T ss_pred             ------CCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhc
Confidence                  15789999999887544      223467899999999999953 3445999999999999999999999873 


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      ...+.+..|.... ..|                                               ..++.+|.++++||.+
T Consensus       227 ~~~~~~~~ig~~~-~~P-----------------------------------------------~ip~~ls~~a~~Fl~~  258 (313)
T KOG0198|consen  227 EEAEALLLIGRED-SLP-----------------------------------------------EIPDSLSDEAKDFLRK  258 (313)
T ss_pred             chHHHHHHHhccC-CCC-----------------------------------------------CCCcccCHHHHHHHHH
Confidence            3333333222111 000                                               2234678899999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||..||.+||||+++|+|||.++.
T Consensus       259 C~~~~p~~Rpta~eLL~hpf~~~~  282 (313)
T KOG0198|consen  259 CFKRDPEKRPTAEELLEHPFLKQN  282 (313)
T ss_pred             HhhcCcccCcCHHHHhhChhhhcc
Confidence            999999999999999999999874

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-49  Score=366.20  Aligned_cols=251  Identities=26%  Similarity=0.392  Sum_probs=214.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||||++....    .....+..|+.+++.+.      ||||+++++++.+.+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~~   74 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVS------HPFIIRLFWTEHDQR   74 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCC------CCcHhhhHhhhccCC
Confidence            36999999999999999999999999999999986432    22344666888887775      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++                 
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~-----------------  135 (291)
T cd05612          75 FLYMLMEYVPGGELFSYLRNSG--RFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD-----------------  135 (291)
T ss_pred             eEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC-----------------
Confidence            999999999 999999998765  589999999999999999999999999999999999993                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                             .++.++|+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       136 -------~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~  208 (291)
T cd05612         136 -------KEGHIKLTDFGFAKKLRDRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYE  208 (291)
T ss_pred             -------CCCCEEEEecCcchhccCCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                   4667999999998776555556789999999999999999999999999999999999999998877766665


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+......                        +                          +..++..+.+||.+||+.||.
T Consensus       209 ~i~~~~~~------------------------~--------------------------~~~~~~~~~~li~~~l~~dp~  238 (291)
T cd05612         209 KILAGKLE------------------------F--------------------------PRHLDLYAKDLIKKLLVVDRT  238 (291)
T ss_pred             HHHhCCcC------------------------C--------------------------CccCCHHHHHHHHHHcCCCHH
Confidence            55432211                        1                          123467789999999999999


Q ss_pred             CCCC-----HHHHhCCccccCCC
Q 015867          381 ERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       381 ~R~t-----~~ell~hp~f~~~~  398 (399)
                      +|++     ++++++||||+.++
T Consensus       239 ~R~~~~~~~~~~~l~h~~~~~~~  261 (291)
T cd05612         239 RRLGNMKNGADDVKNHRWFKSVD  261 (291)
T ss_pred             HccCCccCCHHHHhcCccccCCC
Confidence            9995     99999999998764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=9e-49  Score=356.78  Aligned_cols=263  Identities=25%  Similarity=0.378  Sum_probs=215.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.|++...||.|..++||+|+...++..||||++....-  .-+....|+..+..+.      ||||+..+..|..+..
T Consensus        25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~------HPNIv~~~~sFvv~~~   98 (516)
T KOG0582|consen   25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLID------HPNIVTYHCSFVVDSE   98 (516)
T ss_pred             ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcC------CCCcceEEEEEEecce
Confidence            3579999999999999999999999999999999975322  2355666777777764      6999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+||.|| +|++.++++..-...+++..+..|+++++.||.|||.+|.||||||+.||||                   
T Consensus        99 LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi-------------------  159 (516)
T KOG0582|consen   99 LWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILI-------------------  159 (516)
T ss_pred             eEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEE-------------------
Confidence            99999999 9999999998766679999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCC--CC-----CcccccCCCccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDN--QN-----HSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~--~~-----~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                           +.+|.|||+|||.+....  ..     ..+++||++|||||++..  .+|+.|+||||||++..||.+|..||..
T Consensus       160 -----~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k  234 (516)
T KOG0582|consen  160 -----DSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSK  234 (516)
T ss_pred             -----cCCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCccc
Confidence                 456779999998654311  11     156799999999999654  4799999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .....++.+-.+  +.+|.-...                                      .........++..++.+|.
T Consensus       235 ~pPmkvLl~tLq--n~pp~~~t~--------------------------------------~~~~d~~k~~~ksf~e~i~  274 (516)
T KOG0582|consen  235 YPPMKVLLLTLQ--NDPPTLLTS--------------------------------------GLDKDEDKKFSKSFREMIA  274 (516)
T ss_pred             CChHHHHHHHhc--CCCCCcccc--------------------------------------cCChHHhhhhcHHHHHHHH
Confidence            888776654333  333321100                                      0000111345668999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .||+.||.+||||+++|+|+||+..
T Consensus       275 ~CL~kDP~kRptAskLlkh~FFk~~  299 (516)
T KOG0582|consen  275 LCLVKDPSKRPTASKLLKHAFFKKA  299 (516)
T ss_pred             HHhhcCcccCCCHHHHhccHHHhhc
Confidence            9999999999999999999999975

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=4.7e-49  Score=371.83  Aligned_cols=251  Identities=27%  Similarity=0.447  Sum_probs=215.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++.+.||+|+||.||+|++..+++.||||++....    .....+..|+.+++.+.      |+||+++++.+.+.
T Consensus        17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~   90 (329)
T PTZ00263         17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELS------HPFIVNMMCSFQDE   90 (329)
T ss_pred             chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC------CCCCCcEEEEEEcC
Confidence            357999999999999999999999999999999997532    22344667888887775      59999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..|+||||+ +++|.+++.+.+  .+++..+..++.||+.||+|||++||+||||||+|||+                 
T Consensus        91 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll-----------------  151 (329)
T PTZ00263         91 NRVYFLLEFVVGGELFTHLRKAG--RFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLL-----------------  151 (329)
T ss_pred             CEEEEEEcCCCCChHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEE-----------------
Confidence            9999999999 999999998765  58999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                             +.++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+..
T Consensus       152 -------~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~  224 (329)
T PTZ00263        152 -------DNKGHVKVTDFGFAKKVPDRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIY  224 (329)
T ss_pred             -------CCCCCEEEeeccCceEcCCCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHH
Confidence                   4567799999999887666556678999999999999999999999999999999999999999887766555


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......                        +                          +..++..+.+||.+||+.||
T Consensus       225 ~~i~~~~~~------------------------~--------------------------p~~~~~~~~~li~~~L~~dP  254 (329)
T PTZ00263        225 EKILAGRLK------------------------F--------------------------PNWFDGRARDLVKGLLQTDH  254 (329)
T ss_pred             HHHhcCCcC------------------------C--------------------------CCCCCHHHHHHHHHHhhcCH
Confidence            544332111                        1                          12346678899999999999


Q ss_pred             CCCCC-----HHHHhCCccccCC
Q 015867          380 SERLT-----ARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~t-----~~ell~hp~f~~~  397 (399)
                      .+|++     ++++++||||++.
T Consensus       255 ~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        255 TKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             HHcCCCCCCCHHHHhcCCccCCC
Confidence            99997     7999999999875

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=4.3e-48  Score=358.26  Aligned_cols=280  Identities=31%  Similarity=0.602  Sum_probs=222.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++.+.||+|+||.||+|++..+++.||+|++....   .....+..|+++++.+.      |+||+++++.+..++.
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~   74 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLK------QENIVELKEAFRRRGK   74 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCC------CccccchhhhEecCCE
Confidence            36999999999999999999999999999999987532   22345667888887775      5899999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .++||||+.+++.+.+.... ..+++..++.++.||+.||.|||+.||+||||||+||++                    
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill--------------------  133 (287)
T cd07848          75 LYLVFEYVEKNMLELLEEMP-NGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLI--------------------  133 (287)
T ss_pred             EEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE--------------------
Confidence            99999999444444444332 259999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                          +.++.++|+|||++......    .....||+.|+|||++.+..++.++|+|||||++|+|++|++||.+.+..+.
T Consensus       134 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~  209 (287)
T cd07848         134 ----SHNDVLKLCDFGFARNLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ  209 (287)
T ss_pred             ----cCCCcEEEeeccCcccccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH
Confidence                34667999999988764321    2345789999999999998999999999999999999999999999888888


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+....+++|........+....  .   ...+|....             ...........+|.++.+||.+||+.|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~-------------~~~~~~~~~~~~s~~~~dll~~~L~~~  271 (287)
T cd07848         210 LFTIQKVLGPLPAEQMKLFYSNPRF--H---GLRFPAVNH-------------PQSLERRYLGILSGVLLDLMKNLLKLN  271 (287)
T ss_pred             HHHHHHhhCCCCHHHHHhhhccchh--c---ccccCcccC-------------cccHHHhhhcccCHHHHHHHHHHccCC
Confidence            8888888888887665543221110  0   111221100             001111223457788999999999999


Q ss_pred             CCCCCCHHHHhCCccc
Q 015867          379 PSERLTARQALNHPFF  394 (399)
Q Consensus       379 P~~R~t~~ell~hp~f  394 (399)
                      |.+|||++|+|+||||
T Consensus       272 P~~R~s~~~~l~hp~f  287 (287)
T cd07848         272 PTDRYLTEQCLNHPAF  287 (287)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=3.2e-48  Score=359.68  Aligned_cols=279  Identities=30%  Similarity=0.512  Sum_probs=217.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEcc-CCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec---
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQ-TQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD---  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~---  138 (399)
                      ++|++.+.||+|+||.||+|.+.. +++.||+|.++....   .......|..+++.+..   ..||||+++++++.   
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~hpniv~~~~~~~~~~   77 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET---FEHPNVVRLFDVCTVSR   77 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcc---cCCCCcceEEEEEeccc
Confidence            369999999999999999999854 578899999864321   22345567777666543   35799999999874   


Q ss_pred             --cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          139 --YRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       139 --~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                        ....+++||||++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++             
T Consensus        78 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~-------------  144 (290)
T cd07862          78 TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT-------------  144 (290)
T ss_pred             CCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc-------------
Confidence              34578999999988999999876655699999999999999999999999999999999999993             


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                                 .++.++|+|||++.....  ......||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+
T Consensus       145 -----------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~  213 (290)
T cd07862         145 -----------SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSS  213 (290)
T ss_pred             -----------CCCCEEEccccceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCC
Confidence                       466799999999865332  2345678999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+.+..+....+.+....++.........+...                       .........+.++..+.+||.+|
T Consensus       214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~li~~~  270 (290)
T cd07862         214 DVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK-----------------------SAQPIEKFVTDIDELGKDLLLKC  270 (290)
T ss_pred             HHHHHHHHHHHhCCCChhhchhhhcccchhccCC-----------------------CCCCHHHHccCCCHHHHHHHHHH
Confidence            8888888887766554432222111000000000                       00000112245678889999999


Q ss_pred             cccCCCCCCCHHHHhCCccc
Q 015867          375 LRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f  394 (399)
                      |+.||.+|||+.|+|+||||
T Consensus       271 l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         271 LTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             hccCchhcCCHHHHhcCCCC
Confidence            99999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=3.8e-50  Score=344.50  Aligned_cols=257  Identities=30%  Similarity=0.514  Sum_probs=222.7

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---------hhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      +-..|.-.+.||.|..+.|-+|..+.+|+.+|+|++....         ........|+.||+++.     +||+|+++.
T Consensus        15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~-----GHP~II~l~   89 (411)
T KOG0599|consen   15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVM-----GHPYIIDLQ   89 (411)
T ss_pred             HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhc-----CCCcEEEee
Confidence            3346888899999999999999999999999999985321         22344566888998886     799999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      ++|+.+.+.++|+|.| .|.|+|++.+.-  .+++...+.|++|+++|++|||..+||||||||+|||+           
T Consensus        90 D~yes~sF~FlVFdl~prGELFDyLts~V--tlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILl-----------  156 (411)
T KOG0599|consen   90 DVYESDAFVFLVFDLMPRGELFDYLTSKV--TLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILL-----------  156 (411)
T ss_pred             eeccCcchhhhhhhhcccchHHHHhhhhe--eecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheee-----------
Confidence            9999999999999999 999999998876  59999999999999999999999999999999999998           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhC------CCCCCcchhHHHHHHHHHHHh
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILG------LGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell~  285 (399)
                                   +.+..++|+|||+++.....  ....||||+|.|||.+.-      .+|+..+|+|++|||||.|+.
T Consensus       157 -------------ddn~~i~isDFGFa~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLa  223 (411)
T KOG0599|consen  157 -------------DDNMNIKISDFGFACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLA  223 (411)
T ss_pred             -------------ccccceEEeccceeeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHc
Confidence                         56888999999999875543  357899999999999852      368999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |.+||.-....-++..|.++...+..                                              +.+.++|.
T Consensus       224 GcpPFwHRkQmlMLR~ImeGkyqF~s----------------------------------------------peWadis~  257 (411)
T KOG0599|consen  224 GCPPFWHRKQMLMLRMIMEGKYQFRS----------------------------------------------PEWADISA  257 (411)
T ss_pred             CCCchhHHHHHHHHHHHHhcccccCC----------------------------------------------cchhhccc
Confidence            99999988888888888776554422                                              22356788


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ..+|||.+||+.||.+|+|++|+|+||||.++
T Consensus       258 ~~KdLIsrlLqVdp~~Ritake~LaHpff~q~  289 (411)
T KOG0599|consen  258 TVKDLISRLLQVDPTKRITAKEALAHPFFIQI  289 (411)
T ss_pred             cHHHHHHHHHeeCchhcccHHHHhcChHHHHH
Confidence            89999999999999999999999999999653

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=5.8e-48  Score=365.79  Aligned_cols=281  Identities=31%  Similarity=0.512  Sum_probs=222.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC---
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR---  140 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~---  140 (399)
                      +|++.+.||+|+||.||+|.+..+++.||||.+....   .....+..|+++++.+.      ||||+++++++...   
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~~~~   74 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLR------HPDIVEIKHIMLPPSRR   74 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCC------CCCEeeecceEeccCCC
Confidence            5999999999999999999999999999999986421   22234667888887775      59999999887542   


Q ss_pred             --CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          141 --NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       141 --~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                        ...|+||||++++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+                
T Consensus        75 ~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll----------------  136 (338)
T cd07859          75 EFKDIYVVFELMESDLHQVIKAND--DLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILA----------------  136 (338)
T ss_pred             CCceEEEEEecCCCCHHHHHHhcc--cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE----------------
Confidence              3589999999889999998765  59999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                              +.++.+||+|||++......      ....+||+.|+|||++.+  ..++.++|||||||++|+|++|++||
T Consensus       137 --------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf  208 (338)
T cd07859         137 --------NADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLF  208 (338)
T ss_pred             --------CCCCcEEEccCccccccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCC
Confidence                    45678999999998653211      134579999999999876  67899999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .+.+....+..+....+.++......+.......+.                 ......  .........+.++..+.+|
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-----------------~~~~~~--~~~~~~~~~~~~~~~~~~l  269 (338)
T cd07859         209 PGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYL-----------------SSMRKK--QPVPFSQKFPNADPLALRL  269 (338)
T ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHH-----------------Hhhccc--CCCchHHhcCCCChHHHHH
Confidence            998888888888888888777765554322111000                 000000  0000111224567788999


Q ss_pred             HHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          371 LHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      |.+||+.||.+|||++|+++||||+++.
T Consensus       270 i~~~l~~~P~~Rpt~~e~l~hp~f~~~~  297 (338)
T cd07859         270 LERLLAFDPKDRPTAEEALADPYFKGLA  297 (338)
T ss_pred             HHHHcCcCcccCCCHHHHhcCchhhhcC
Confidence            9999999999999999999999998864

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=2.1e-48  Score=368.50  Aligned_cols=252  Identities=28%  Similarity=0.491  Sum_probs=214.1

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCC-eEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQ-ERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~-~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .++|++.+.||+|+||.||+|.+..++ ..||+|++....    .....+..|..+++.+.      ||||+++++++.+
T Consensus        29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~Iv~~~~~~~~  102 (340)
T PTZ00426         29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYIN------HPFCVNLYGSFKD  102 (340)
T ss_pred             hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC------CCCCcceEEEEEe
Confidence            457999999999999999999866554 789999986532    22344566888887774      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..|+||||+ +++|.+++.+.+  .+++..+..++.||+.||.|||++||+||||||+|||+                
T Consensus       103 ~~~~~lv~Ey~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl----------------  164 (340)
T PTZ00426        103 ESYLYLVLEFVIGGEFFTFLRRNK--RFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLL----------------  164 (340)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEE----------------
Confidence            99999999999 999999998766  59999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                              +.++.++|+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+....
T Consensus       165 --------~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~  236 (340)
T PTZ00426        165 --------DKDGFIKMTDFGFAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLI  236 (340)
T ss_pred             --------CCCCCEEEecCCCCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHH
Confidence                    456789999999987766555677899999999999999999999999999999999999999988776655


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+......+                                                  +..++..+.+||++||+.|
T Consensus       237 ~~~i~~~~~~~--------------------------------------------------p~~~~~~~~~li~~~l~~d  266 (340)
T PTZ00426        237 YQKILEGIIYF--------------------------------------------------PKFLDNNCKHLMKKLLSHD  266 (340)
T ss_pred             HHHHhcCCCCC--------------------------------------------------CCCCCHHHHHHHHHHcccC
Confidence            55554322111                                                  1245677899999999999


Q ss_pred             CCCCC-----CHHHHhCCccccCCC
Q 015867          379 PSERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~-----t~~ell~hp~f~~~~  398 (399)
                      |.+|+     |++++++||||++++
T Consensus       267 p~~R~~~~~~~~~~~~~hp~f~~~~  291 (340)
T PTZ00426        267 LTKRYGNLKKGAQNVKEHPWFGNID  291 (340)
T ss_pred             HHHcCCCCCCCHHHHHcCCCcCCCC
Confidence            99996     899999999999864

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=6.5e-48  Score=360.01  Aligned_cols=284  Identities=29%  Similarity=0.457  Sum_probs=216.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||.|+||.||+|++..+++.||||+++....  .......|+.+++.+.      |+||+++++++.++...
T Consensus         5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~   78 (303)
T cd07869           5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLK------HANIVLLHDIIHTKETL   78 (303)
T ss_pred             ccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCC------CCCcCeEEEEEecCCeE
Confidence            579999999999999999999999999999999864321  2234566888887775      59999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||++++|.+++..... .+++..++.++.||+.||+|||++||+||||||+|||++                    
T Consensus        79 ~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~--------------------  137 (303)
T cd07869          79 TLVFEYVHTDLCQYMDKHPG-GLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS--------------------  137 (303)
T ss_pred             EEEEECCCcCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC--------------------
Confidence            99999998899998876532 589999999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCc-HHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHEN-LEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~-~~~  298 (399)
                          .++.+||+|||++.....   ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+... .+.
T Consensus       138 ----~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  213 (303)
T cd07869         138 ----DTGELKLADFGLARAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQ  213 (303)
T ss_pred             ----CCCCEEECCCCcceeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH
Confidence                466799999998764322   22345789999999998764 588999999999999999999999987544 455


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +..+....+.++...++...+...  +. .  ..+..  .....         +...  ......+.++.+||.+||+.|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~--~~-~--~~~~~--~~~~~---------~~~~--~~~~~~~~~~~dli~~mL~~d  275 (303)
T cd07869         214 LERIFLVLGTPNEDTWPGVHSLPH--FK-P--ERFTL--YSPKN---------LRQA--WNKLSYVNHAEDLASKLLQCF  275 (303)
T ss_pred             HHHHHHHhCCCChhhccchhhccc--cc-c--ccccc--cCCcc---------HHHH--hhccCCChHHHHHHHHHhccC
Confidence            666666655555443332221100  00 0  00000  00000         0000  001124567899999999999


Q ss_pred             CCCCCCHHHHhCCccccCCC
Q 015867          379 PSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~~  398 (399)
                      |.+|||+.|+++||||+++.
T Consensus       276 p~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         276 PKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             chhccCHHHHhcCcccccCC
Confidence            99999999999999999874

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=5.6e-48  Score=357.31  Aligned_cols=255  Identities=25%  Similarity=0.401  Sum_probs=209.4

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      |++.+.||+|+||.||+|.+..+++.||+|.+....    .....+..|+.+++.+.      |++++.+++.+.+.+..
T Consensus         2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~iv~~~~~~~~~~~~   75 (285)
T cd05631           2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVN------SRFVVSLAYAYETKDAL   75 (285)
T ss_pred             ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcC------CCcEEEEEEEEccCCeE
Confidence            889999999999999999999999999999986432    12234556778887775      58999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.......+++..+..++.|++.||+|||++||+||||||+|||+                    
T Consensus        76 ~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill--------------------  135 (285)
T cd05631          76 CLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILL--------------------  135 (285)
T ss_pred             EEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE--------------------
Confidence            9999999 8999988876554469999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                          +.++.++|+|||++.....  ......||..|+|||++.+..++.++|||||||++|+|++|+.||...+......
T Consensus       136 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~  211 (285)
T cd05631         136 ----DDRGHIRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE  211 (285)
T ss_pred             ----CCCCCEEEeeCCCcEEcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH
Confidence                3466799999999876432  2234579999999999999999999999999999999999999998765433222


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+......                                              ........++.++.+||.+||+.||.
T Consensus       212 ~~~~~~~~----------------------------------------------~~~~~~~~~s~~~~~li~~~l~~~P~  245 (285)
T cd05631         212 EVDRRVKE----------------------------------------------DQEEYSEKFSEDAKSICRMLLTKNPK  245 (285)
T ss_pred             HHHHHhhc----------------------------------------------ccccCCccCCHHHHHHHHHHhhcCHH
Confidence            22211100                                              00112235678889999999999999


Q ss_pred             CCCC-----HHHHhCCccccCCC
Q 015867          381 ERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       381 ~R~t-----~~ell~hp~f~~~~  398 (399)
                      +|||     ++++++||||++++
T Consensus       246 ~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         246 ERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             HhcCCCCCCHHHHhcCHhhcCCC
Confidence            9997     89999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=3.1e-48  Score=365.33  Aligned_cols=245  Identities=27%  Similarity=0.485  Sum_probs=204.8

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|.+..+|+.||||+++...    ........|..+++.+.      |+||+.+++.+...+..|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------hp~i~~~~~~~~~~~~~~lv~   74 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTR------HPFLTALKYSFQTHDRLCFVM   74 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC------CCCCCCEEEEEEcCCEEEEEE
Confidence            46999999999999999999999999997532    12233455667776664      699999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||+                        
T Consensus        75 e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll------------------------  128 (323)
T cd05571          75 EYANGGELFFHLSRER--VFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLML------------------------  128 (323)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE------------------------
Confidence            999 999999998765  69999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+.
T Consensus       129 ~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~  208 (323)
T cd05571         129 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  208 (323)
T ss_pred             CCCCCEEEeeCCCCcccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH
Confidence            44677999999988652   222345679999999999999999999999999999999999999998766655444432


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....                                                  .+..++.++.+||.+||+.||.+||
T Consensus       209 ~~~~~--------------------------------------------------~p~~~~~~~~~li~~~L~~dP~~R~  238 (323)
T cd05571         209 MEEIR--------------------------------------------------FPRTLSPEAKSLLAGLLKKDPKQRL  238 (323)
T ss_pred             cCCCC--------------------------------------------------CCCCCCHHHHHHHHHHccCCHHHcC
Confidence            21111                                                  1234577889999999999999999


Q ss_pred             -----CHHHHhCCccccCCC
Q 015867          384 -----TARQALNHPFFRNLN  398 (399)
Q Consensus       384 -----t~~ell~hp~f~~~~  398 (399)
                           ++.++++||||++++
T Consensus       239 ~~~~~~~~~ll~h~~f~~~~  258 (323)
T cd05571         239 GGGPEDAKEIMEHRFFASIN  258 (323)
T ss_pred             CCCCCCHHHHHcCCCcCCCC
Confidence                 899999999998863

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.9e-47  Score=373.62  Aligned_cols=282  Identities=27%  Similarity=0.515  Sum_probs=220.6

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc---
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY---  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~---  139 (399)
                      ...++|++.+.||+|+||.||+|.+..+++.||||.+....   .....|+.+++.+.      |+||+++++++..   
T Consensus        63 ~~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~------h~niv~l~~~~~~~~~  133 (440)
T PTZ00036         63 SPNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---QYKNRELLIMKNLN------HINIIFLKDYYYTECF  133 (440)
T ss_pred             CcCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHhcC------CCCCcceeeeEeeccc
Confidence            34568999999999999999999999999999999885432   22345888888875      5999999887632   


Q ss_pred             -----CCeEEEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          140 -----RNHICIVFEKLGPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       140 -----~~~~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                           ...+++||||++++|.+++...  ....+++..++.++.||+.||+|||++||+||||||+|||++.        
T Consensus       134 ~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~--------  205 (440)
T PTZ00036        134 KKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP--------  205 (440)
T ss_pred             ccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC--------
Confidence                 2357899999988898887542  2336999999999999999999999999999999999999942        


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCC
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                     .+..+||+|||++....  ......+||+.|+|||++.+. .++.++|||||||++|+|++|.+|
T Consensus       206 ---------------~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~p  270 (440)
T PTZ00036        206 ---------------NTHTLKLCDFGSAKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPI  270 (440)
T ss_pred             ---------------CCCceeeeccccchhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                           23469999999987533  223456789999999998764 699999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+..+.+.++.+..+.++...+........       ...+|...              ........+...+.++.+
T Consensus       271 f~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~-------~~~~~~~~--------------~~~l~~~~p~~~~~~~~~  329 (440)
T PTZ00036        271 FSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYA-------DIKFPDVK--------------PKDLKKVFPKGTPDDAIN  329 (440)
T ss_pred             CCCCChHHHHHHHHHHhCCCCHHHHHHhchhhh-------cccCCccC--------------chhHHHHhccCCCHHHHH
Confidence            999998899999988888777655443211100       01111100              000111223456788999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+||++||.+|||+.|+|+||||.++
T Consensus       330 li~~~L~~dP~~R~ta~e~l~hp~f~~~  357 (440)
T PTZ00036        330 FISQFLKYEPLKRLNPIEALADPFFDDL  357 (440)
T ss_pred             HHHHHCCCChhHCcCHHHHhCChhHHhh
Confidence            9999999999999999999999999875

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=1.3e-47  Score=366.76  Aligned_cols=254  Identities=24%  Similarity=0.371  Sum_probs=206.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++++.||+|+||+||+|.+..+++.||||+++....    ....+..|..++..+.      |++|+++++.+.+.+
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~------~~~iv~~~~~~~~~~   74 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEAD------SLWVVKMFYSFQDKL   74 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCC------CCCcceEEEEEecCC
Confidence            369999999999999999999999999999999975321    2234556777777664      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||+ |++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||++                 
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~-----------------  135 (363)
T cd05628          75 NLYLIMEFLPGGDMMTLLMKKD--TLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD-----------------  135 (363)
T ss_pred             eEEEEEcCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC-----------------
Confidence            999999999 999999998765  699999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC--------------------------------------CcccccCCCccchhhh
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN--------------------------------------HSSIVSTRHYRAPEVI  262 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--------------------------------------~~~~~gt~~y~aPE~~  262 (399)
                             .++.++|+|||++......                                      ....+||+.|+|||++
T Consensus       136 -------~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~  208 (363)
T cd05628         136 -------SKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVF  208 (363)
T ss_pred             -------CCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHH
Confidence                   4667999999987542110                                      1235799999999999


Q ss_pred             hCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHH
Q 015867          263 LGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES  342 (399)
Q Consensus       263 ~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  342 (399)
                      .+..++.++|||||||++|+|++|..||.+.+..+....+......+                      .+|.       
T Consensus       209 ~~~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~----------------------~~p~-------  259 (363)
T cd05628         209 MQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETL----------------------IFPP-------  259 (363)
T ss_pred             cCCCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcc----------------------cCCC-------
Confidence            99999999999999999999999999999877766666554321110                      0110       


Q ss_pred             HHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC---CCCCHHHHhCCccccCCC
Q 015867          343 IKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS---ERLTARQALNHPFFRNLN  398 (399)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~---~R~t~~ell~hp~f~~~~  398 (399)
                                       ...++.++.+||.+|+. +|.   .||+++|+++||||++++
T Consensus       260 -----------------~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~~  300 (363)
T cd05628         260 -----------------EVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGVD  300 (363)
T ss_pred             -----------------cCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCCC
Confidence                             12356788999999775 444   468999999999999863

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-49  Score=341.09  Aligned_cols=260  Identities=29%  Similarity=0.474  Sum_probs=217.5

Q ss_pred             CccCCCEEEE-eeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-
Q 015867           62 ENLTPRYKIL-SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-  139 (399)
Q Consensus        62 ~~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-  139 (399)
                      ..++++|.+. ++||-|-.|.|-.|.++.+++.||+|++....+    ..+|+++--..     .+|+|||.+++.|++ 
T Consensus        57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~K----ARrEVeLHw~~-----s~h~~iV~IidVyeNs  127 (400)
T KOG0604|consen   57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSPK----ARREVELHWMA-----SGHPHIVSIIDVYENS  127 (400)
T ss_pred             ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCHH----HHhHhhhhhhh-----cCCCceEEeehhhhhh
Confidence            3466788876 579999999999999999999999999865433    34455543332     378999999998865 


Q ss_pred             ---CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          140 ---RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       140 ---~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                         ...+.+|||.+ ||.|++.++.++...|++..+..|++||..|+.|||+.+|.||||||+|+|....          
T Consensus       128 ~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t----------  197 (400)
T KOG0604|consen  128 YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTT----------  197 (400)
T ss_pred             ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecC----------
Confidence               45789999999 9999999999998899999999999999999999999999999999999999764          


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                 ..+-.+||+|||+|+...  ....+.|.|++|.|||++-...|+..+|+||+||++|-|++|.+||-..
T Consensus       198 -----------~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~  266 (400)
T KOG0604|consen  198 -----------SPNAPLKLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSN  266 (400)
T ss_pred             -----------CCCcceEecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCccccc
Confidence                       367889999999998754  4456788999999999999999999999999999999999999999764


Q ss_pred             Cc----HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          294 EN----LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       294 ~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      ..    .....+|..+...+|.                                              +-+..+|.+.+|
T Consensus       267 hg~aispgMk~rI~~gqy~FP~----------------------------------------------pEWs~VSe~aKd  300 (400)
T KOG0604|consen  267 HGLAISPGMKRRIRTGQYEFPE----------------------------------------------PEWSCVSEAAKD  300 (400)
T ss_pred             CCccCChhHHhHhhccCccCCC----------------------------------------------hhHhHHHHHHHH
Confidence            43    2334444444333332                                              233567899999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +|+++|+.||.+|+|+++++.|||+.+-
T Consensus       301 lIR~LLkt~PteRlTI~~~m~hpwi~~~  328 (400)
T KOG0604|consen  301 LIRKLLKTEPTERLTIEEVMDHPWINQY  328 (400)
T ss_pred             HHHHHhcCCchhheeHHHhhcCchhccc
Confidence            9999999999999999999999999863

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=2.6e-49  Score=355.89  Aligned_cols=251  Identities=29%  Similarity=0.494  Sum_probs=221.0

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhh----HHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ..+.-+|++.+.||+|.||.|-+|+....|+.||||.+++.....    -...+|++|+..|+      ||||+.+++.|
T Consensus        49 hnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLN------HPhII~IyEVF  122 (668)
T KOG0611|consen   49 HNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLN------HPHIIQIYEVF  122 (668)
T ss_pred             cchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcC------CCceeehhhhh
Confidence            345568999999999999999999999999999999997643322    23556888888775      59999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      ++.+.+.|||||. +|.|++++...+  .+++..++.+++||.+|+.|||.+++||||||.+|||+              
T Consensus       123 ENkdKIvivMEYaS~GeLYDYiSer~--~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILL--------------  186 (668)
T KOG0611|consen  123 ENKDKIVIVMEYASGGELYDYISERG--SLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILL--------------  186 (668)
T ss_pred             cCCceEEEEEEecCCccHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHhhccceecccchhheee--------------
Confidence            9999999999999 999999999887  59999999999999999999999999999999999998              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                +.++.+||+|||++....  ....++||++.|.+||+..|.+| ++.+|.|||||+||.|+.|.+||++.
T Consensus       187 ----------D~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~  256 (668)
T KOG0611|consen  187 ----------DQNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR  256 (668)
T ss_pred             ----------cCCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc
Confidence                      668899999999987643  33478999999999999999987 58899999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +....+.+|..+...-|                                                   .-+.++.-||+.
T Consensus       257 Dhk~lvrQIs~GaYrEP---------------------------------------------------~~PSdA~gLIRw  285 (668)
T KOG0611|consen  257 DHKRLVRQISRGAYREP---------------------------------------------------ETPSDASGLIRW  285 (668)
T ss_pred             hHHHHHHHhhcccccCC---------------------------------------------------CCCchHHHHHHH
Confidence            99988888877644322                                                   235566789999


Q ss_pred             ccccCCCCCCCHHHHhCCcccc
Q 015867          374 LLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      ||.+||.+|.|++++-+|-|++
T Consensus       286 mLmVNP~RRATieDiAsHWWvN  307 (668)
T KOG0611|consen  286 MLMVNPERRATIEDIASHWWVN  307 (668)
T ss_pred             HHhcCcccchhHHHHhhhheee
Confidence            9999999999999999999986

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-48  Score=359.60  Aligned_cols=257  Identities=25%  Similarity=0.475  Sum_probs=230.2

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+++=|.+.+.||+|.|+.|-+|++.-+|..||||++.++.   .....+..|++-++.++|      ||||++|+..+.
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQH------pNiVRLYEViDT   88 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQH------PNIVRLYEVIDT   88 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcC------cCeeeeeehhcc
Confidence            35566999999999999999999999999999999997643   234557778888888864      999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      +..+|||+|+- +|+|+++|-++.. .+.+..++.|+.||+.|+.|||+..+|||||||+||.|.               
T Consensus        89 QTKlyLiLELGD~GDl~DyImKHe~-Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFF---------------  152 (864)
T KOG4717|consen   89 QTKLYLILELGDGGDLFDYIMKHEE-GLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFF---------------  152 (864)
T ss_pred             cceEEEEEEecCCchHHHHHHhhhc-cccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEe---------------
Confidence            99999999999 9999999987654 699999999999999999999999999999999999984               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccC--CCCCcccccCCCccchhhhhCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFD--NQNHSSIVSTRHYRAPEVILGLGWS-YPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~--~~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                              .+-+-+||+|||++...  +....+.||+..|.|||++.|..|+ +++||||||||||.|++|++||...++
T Consensus       153 --------EKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeAND  224 (864)
T KOG4717|consen  153 --------EKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEAND  224 (864)
T ss_pred             --------eecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccc
Confidence                    46788999999998653  3445789999999999999999987 679999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+++.+|.......|..                                                  ++.+++|||..||
T Consensus       225 SETLTmImDCKYtvPsh--------------------------------------------------vS~eCrdLI~sML  254 (864)
T KOG4717|consen  225 SETLTMIMDCKYTVPSH--------------------------------------------------VSKECRDLIQSML  254 (864)
T ss_pred             hhhhhhhhcccccCchh--------------------------------------------------hhHHHHHHHHHHH
Confidence            99999998877766654                                                  5788999999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCCCC
Q 015867          376 RYDPSERLTARQALNHPFFRNLNE  399 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~~e  399 (399)
                      +.||.+|.+.+||..|+|++.+++
T Consensus       255 vRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  255 VRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             hcCchhhccHHHHhccccccCCCC
Confidence            999999999999999999999875

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7.9e-49  Score=359.38  Aligned_cols=251  Identities=25%  Similarity=0.394  Sum_probs=208.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---------------hhHHHHHHHHHHHHhhhcCCCCCcc
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---------------YRDAAMIEIDVLQHLAKNDKGGSSH  129 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------~~~~~~~e~~~l~~l~~~~~~~~~~  129 (399)
                      .++|++.+.||+|.||.|-+|++..+++.||||++.+...               .-.....|+.|++++.      |+|
T Consensus        96 lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~------H~n  169 (576)
T KOG0585|consen   96 LNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLH------HPN  169 (576)
T ss_pred             hhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcC------CcC
Confidence            4689999999999999999999999999999999964221               1135566888888775      599


Q ss_pred             eeeeceeecc--CCeEEEEEccC-CCCHHHHHHhcCCCC-CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeec
Q 015867          130 CVQIRNWFDY--RNHICIVFEKL-GPSLFDFLKRNKYCP-FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSS  205 (399)
Q Consensus       130 iv~~~~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~-~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~  205 (399)
                      ||++++..++  .+.+|||+||| .|.+...   ...+. +++.+++.|+++++.||+|||.+|||||||||+|+||   
T Consensus       170 VV~LiEvLDDP~s~~~YlVley~s~G~v~w~---p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl---  243 (576)
T KOG0585|consen  170 VVKLIEVLDDPESDKLYLVLEYCSKGEVKWC---PPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLL---  243 (576)
T ss_pred             eeEEEEeecCcccCceEEEEEeccCCccccC---CCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEE---
Confidence            9999999987  46899999999 6665432   22224 8999999999999999999999999999999999999   


Q ss_pred             ccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC--------CcccccCCCccchhhhhCC----CCCCcchh
Q 015867          206 EFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--------HSSIVSTRHYRAPEVILGL----GWSYPCDM  273 (399)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------~~~~~gt~~y~aPE~~~~~----~~~~~~Di  273 (399)
                                           +.++++||+|||.+......        ....+|||.|+|||.+.+.    ..+.+.||
T Consensus       244 ---------------------~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~Di  302 (576)
T KOG0585|consen  244 ---------------------SSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDI  302 (576)
T ss_pred             ---------------------cCCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhh
Confidence                                 45678999999987653211        1336899999999999873    24688999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhh
Q 015867          274 WSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK  353 (399)
Q Consensus       274 wslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  353 (399)
                      ||+||+||.|+.|+.||-+....+...+|......+|..                                         
T Consensus       303 WalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~-----------------------------------------  341 (576)
T KOG0585|consen  303 WALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN-----------------------------------------  341 (576)
T ss_pred             hhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc-----------------------------------------
Confidence            999999999999999999999999999887754444321                                         


Q ss_pred             hhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       354 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                             +.+...++|||.+||.+||.+|++..+|..|||..+
T Consensus       342 -------pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~  377 (576)
T KOG0585|consen  342 -------PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTR  377 (576)
T ss_pred             -------ccccHHHHHHHHHHhhcChhheeehhhheecceecc
Confidence                   345677899999999999999999999999999865

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=1.8e-47  Score=360.35  Aligned_cols=251  Identities=24%  Similarity=0.412  Sum_probs=209.8

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +|++++.||+|+||.||+|.+..+++.||||++....    ........|.+++..+.+     +++|+.+++++...+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~-----~~~i~~~~~~~~~~~~   75 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGK-----PPFLTQLHSCFQTMDR   75 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCC-----CCceeeeEEEEEcCCE
Confidence            4899999999999999999999999999999997532    222345567777666643     4578899999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||+                   
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill-------------------  134 (324)
T cd05587          76 LYFVMEYVNGGDLMYHIQQVG--KFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML-------------------  134 (324)
T ss_pred             EEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE-------------------
Confidence            99999999 999999998765  58999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           +.++.++|+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       135 -----~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~  209 (324)
T cd05587         135 -----DAEGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDEL  209 (324)
T ss_pred             -----cCCCCEEEeecCcceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence                 34667999999987642   2233456799999999999999999999999999999999999999988777666


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+......+                                                  +..++.++.+||.+||..|
T Consensus       210 ~~~i~~~~~~~--------------------------------------------------~~~~~~~~~~li~~~l~~~  239 (324)
T cd05587         210 FQSIMEHNVSY--------------------------------------------------PKSLSKEAVSICKGLLTKH  239 (324)
T ss_pred             HHHHHcCCCCC--------------------------------------------------CCCCCHHHHHHHHHHhhcC
Confidence            65554322111                                                  1245677899999999999


Q ss_pred             CCCCCCH-----HHHhCCccccCCC
Q 015867          379 PSERLTA-----RQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t~-----~ell~hp~f~~~~  398 (399)
                      |.+|++.     +++++||||+.++
T Consensus       240 P~~R~~~~~~~~~~~~~hp~~~~~~  264 (324)
T cd05587         240 PAKRLGCGPTGERDIREHAFFRRID  264 (324)
T ss_pred             HHHcCCCCCCCHHHHhcCCCcCCCC
Confidence            9999976     8999999998864

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.3e-47  Score=369.14  Aligned_cols=279  Identities=23%  Similarity=0.408  Sum_probs=214.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      .+|++++.||+|+||.||+|.+..+++.||||....     .....|+++++.+.      ||||++++++|......++
T Consensus        92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-----~~~~~E~~il~~l~------HpnIv~~~~~~~~~~~~~l  160 (391)
T PHA03212         92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-----GGTATEAHILRAIN------HPSIIQLKGTFTYNKFTCL  160 (391)
T ss_pred             CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-----hhhHHHHHHHHhCC------CCCCCCEeEEEEECCeeEE
Confidence            579999999999999999999999999999997532     44677999998885      5999999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          146 VFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       146 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+++++|..++....  .+++..+..++.||+.||.|||++||+||||||+|||++                      
T Consensus       161 v~e~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~----------------------  216 (391)
T PHA03212        161 ILPRYKTDLYCYLAAKR--NIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN----------------------  216 (391)
T ss_pred             EEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc----------------------
Confidence            99999889999987765  589999999999999999999999999999999999993                      


Q ss_pred             CCCCCceEEeecCCcccCCC----CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC-------
Q 015867          226 LPKSSAIKLIDFGSTAFDNQ----NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE-------  294 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-------  294 (399)
                        .++.++|+|||++.....    .....+||+.|+|||++.+..++.++|||||||++|+|++|..||-..+       
T Consensus       217 --~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~  294 (391)
T PHA03212        217 --HPGDVCLGDFGAACFPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCD  294 (391)
T ss_pred             --CCCCEEEEeCCcccccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCc
Confidence              466799999999864221    2234679999999999999999999999999999999999998875422       


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhh--hhhhhhccchhhhhHHHHHHH
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR--LKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~  372 (399)
                      ....+..+....+..|..+...........+                 .........  ............+.++.+||.
T Consensus       295 ~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~  357 (391)
T PHA03212        295 SDRQIKLIIRRSGTHPNEFPIDAQANLDEIY-----------------IGLAKKSSRKPGSRPLWTNLYELPIDLEYLIC  357 (391)
T ss_pred             hhHHHHHHHHHhcCChhhcCcchhHHHHHHH-----------------HHHHhccCCCCCCCCCHHHHhhhhhhHHHHHH
Confidence            3345566666666555432110000000000                 000000000  000000111235678899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||+.||.+|||++|+|+||||+++.
T Consensus       358 ~mL~~dP~~Rpta~elL~hp~f~~~~  383 (391)
T PHA03212        358 KMLAFDAHHRPSAEALLDFAAFQDIP  383 (391)
T ss_pred             HHhcCChhhCCCHHHHhcChhhccCC
Confidence            99999999999999999999999874

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-47  Score=361.56  Aligned_cols=258  Identities=28%  Similarity=0.409  Sum_probs=215.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|++..+++.||||+++...    .....+..|++++..+.      |+||+++++++...+
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~iv~~~~~~~~~~   74 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTK------SEWLVKLLYAFQDDE   74 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCC------CCCCccEEEEEEcCC
Confidence            46999999999999999999999999999999997532    12234556777776664      699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||+ +++|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||+                  
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~------------------  134 (333)
T cd05600          75 YLYLAMEYVPGGDFRTLLNNLG--VLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLI------------------  134 (333)
T ss_pred             EEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE------------------
Confidence            999999999 999999998765  58999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                            +.++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+...
T Consensus       135 ------~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~  208 (333)
T cd05600         135 ------DASGHIKLTDFGLSKGIVTYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWE  208 (333)
T ss_pred             ------CCCCCEEEEeCcCCcccccccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHH
Confidence                  44677999999998776555567789999999999999999999999999999999999999999877766655


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+......+                      ..|...                    .....++.++.+||.+||..+|.
T Consensus       209 ~i~~~~~~~----------------------~~~~~~--------------------~~~~~~s~~~~~li~~~l~~~~~  246 (333)
T cd05600         209 NLKYWKETL----------------------QRPVYD--------------------DPRFNLSDEAWDLITKLINDPSR  246 (333)
T ss_pred             HHHhccccc----------------------cCCCCC--------------------ccccccCHHHHHHHHHHhhChhh
Confidence            554321110                      000000                    00024578889999999999999


Q ss_pred             CCCCHHHHhCCccccCC
Q 015867          381 ERLTARQALNHPFFRNL  397 (399)
Q Consensus       381 ~R~t~~ell~hp~f~~~  397 (399)
                      +||++.++++||||+++
T Consensus       247 rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         247 RFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             hcCCHHHHHhCcccCCC
Confidence            99999999999999975

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=4e-47  Score=351.86  Aligned_cols=278  Identities=29%  Similarity=0.493  Sum_probs=218.1

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc----
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY----  139 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~----  139 (399)
                      +|++.+.||+|+||+||+|.+..+++.||+|.++....   .......|+++++.+.+   ..|+||+++++++..    
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~ni~~~~~~~~~~~~~   77 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEA---FDHPNIVRLMDVCATSRTD   77 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhh---cCCCCeeeeeeeeccccCC
Confidence            59999999999999999999999999999999864321   12345567777777754   357999999998764    


Q ss_pred             -CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 -RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 -~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                       ....++||||+.++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++               
T Consensus        78 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---------------  142 (288)
T cd07863          78 RETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---------------  142 (288)
T ss_pred             CCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---------------
Confidence             3468999999977999999876555699999999999999999999999999999999999993               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                               .++.++|+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|.+||.+....
T Consensus       143 ---------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~  213 (288)
T cd07863         143 ---------SGGQVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA  213 (288)
T ss_pred             ---------CCCCEEECccCccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH
Confidence                     4667999999988764322  23457899999999999999999999999999999999999999988888


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +.+.++....+.+....++.........+...                       .........+.++..+.+||.+||+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~li~~~L~  270 (288)
T cd07863         214 DQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPR-----------------------GPRPVQSVVPEIEESGAQLLLEMLT  270 (288)
T ss_pred             HHHHHHHHHhCCCChhhCcccccccccccCCC-----------------------CCCchHHhCcCcCHHHHHHHHHHhc
Confidence            88888877665544332221100000000000                       0000111224567788999999999


Q ss_pred             cCCCCCCCHHHHhCCccc
Q 015867          377 YDPSERLTARQALNHPFF  394 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f  394 (399)
                      .||.+|||+.|++.||||
T Consensus       271 ~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         271 FNPHKRISAFRALQHPFF  288 (288)
T ss_pred             cCcccCCCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-47  Score=347.75  Aligned_cols=331  Identities=34%  Similarity=0.654  Sum_probs=265.7

Q ss_pred             CCCceeeccCCccC-CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcC--CCCCc
Q 015867           52 REGHYVFNLGENLT-PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKND--KGGSS  128 (399)
Q Consensus        52 ~~~~~~~~~~~~~~-~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~--~~~~~  128 (399)
                      ..++.++.+|+.|. +||.+.++||-|.|++||+|++..+.+.||+|+++...........|+++|+.++...  ..+..
T Consensus        63 kGGYHpV~IGD~F~~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~  142 (590)
T KOG1290|consen   63 KGGYHPVRIGDVFNGGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKK  142 (590)
T ss_pred             cCCCceeeccccccCceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCc
Confidence            56788999999998 9999999999999999999999999999999999998888888999999999998766  55667


Q ss_pred             ceeeeceeecc----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEe
Q 015867          129 HCVQIRNWFDY----RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLV  203 (399)
Q Consensus       129 ~iv~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~  203 (399)
                      +||++++.|..    +.++|+|+|++|.+|..+|....++.++...++.|++||+.||.|||.. ||||.||||+|||+.
T Consensus       143 ~VV~LlD~FkhsGpNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~  222 (590)
T KOG1290|consen  143 CVVQLLDHFKHSGPNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLC  222 (590)
T ss_pred             eeeeeeccceecCCCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeee
Confidence            99999999976    4599999999999999999998888999999999999999999999975 999999999999997


Q ss_pred             ecccc--c-----------CC------------------------CC----------------cC---------------
Q 015867          204 SSEFI--K-----------LP------------------------GY----------------KR---------------  215 (399)
Q Consensus       204 ~~~~~--~-----------~~------------------------~~----------------~~---------------  215 (399)
                      .+..-  +           ++                        ++                ..               
T Consensus       223 ~~e~~~~~~~~~a~e~~~~~p~~s~s~~~t~~d~~~~~~~~~~s~~~~k~~~kk~~r~~~~~~~~l~~~~~~~~~~~~~s  302 (590)
T KOG1290|consen  223 STEIDPAKDAREAGEATTSLPKMSPSAVSTRPDALQRMAAEPMSKSKFKKMKKKLKRQAKKLEASLAGLEGIEEEPNQES  302 (590)
T ss_pred             ccccchhhhhhhhccccccCCCCCcccccccccccchhhccccchhhHHHHHHHHhhhhhhhhhhhcccccccccccccc
Confidence            75220  0           00                        00                00               


Q ss_pred             -------C------C--C--------CCC---Ccc---------------------------------------------
Q 015867          216 -------S------S--S--------GEM---PFR---------------------------------------------  224 (399)
Q Consensus       216 -------~------~--~--------~~~---~~~---------------------------------------------  224 (399)
                             .      +  .        +..   ...                                             
T Consensus       303 ~n~~~~~n~~~~~v~~~~~~~~~~~~~~~~n~~~k~~e~~~~~~~sl~~~~~~~~~t~~~~~~~s~~s~~~~~~n~~v~p  382 (590)
T KOG1290|consen  303 YNNEPRINGNESTVERSTLEEDSNENGNRENLPIKSPENFRGNNTSLPESQLRDSATPSDGSLSSPSSPGTIASNPLVNP  382 (590)
T ss_pred             cccccCCCccccchhhcccccccccccCCccccccCccccccccccccchhcccccccccccccCcCCccccccccccCC
Confidence                   0      0  0        000   000                                             


Q ss_pred             ---cCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC------CCc
Q 015867          225 ---CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT------HEN  295 (399)
Q Consensus       225 ---~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~------~~~  295 (399)
                         .......|||+|||-|+|.....+.-+.|..|+|||++.+.+|++.+||||++|++|||+||...|..      ..+
T Consensus       383 ~~~~~~~di~vKIaDlGNACW~~khFT~DIQTRQYRapEVllGsgY~~~ADiWS~AC~~FELaTGDyLFePhsG~~Y~rD  462 (590)
T KOG1290|consen  383 DIPLPECDIRVKIADLGNACWVHKHFTEDIQTRQYRAPEVLLGSGYSTSADIWSTACMAFELATGDYLFEPHSGENYSRD  462 (590)
T ss_pred             CCCCCccceeEEEeeccchhhhhhhhchhhhhhhccCcceeecCCCCCchhHHHHHHHHHHhhcCceeecCCCCCCCCcc
Confidence               01123458999999999988888888899999999999999999999999999999999999999963      346


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCccc-------CCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRL-------NWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-------~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      .+.++.|.+.++.+|..+...-. -...+|.+.+.+       .||-..+-.         .++     .+...-..++.
T Consensus       463 EDHiA~i~ELLG~iPr~ia~~Gk-~SRdFFnr~G~LrhI~~LK~WpL~~VL~---------eKY-----~~s~e~A~~fs  527 (590)
T KOG1290|consen  463 EDHIALIMELLGKIPRKIALGGK-YSRDFFNRRGELRHIRRLKPWPLYEVLI---------EKY-----EWSEEDAQQFS  527 (590)
T ss_pred             HHHHHHHHHHHhhccHHHHhcCc-chHhhhccccceecccccCCCcHHHHHH---------HHh-----CCCHHHHHHHH
Confidence            78899999999999988866543 233445554433       344211000         000     23345567889


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      |||.-||+.+|.+||||.++|+||||+.+
T Consensus       528 dFL~PmLef~PeKR~tA~~cl~hPwLn~~  556 (590)
T KOG1290|consen  528 DFLSPMLEFDPEKRPTAAQCLKHPWLNPV  556 (590)
T ss_pred             HHHHHHHhcCccccccHHHHhcCccccCC
Confidence            99999999999999999999999999854

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.6e-47  Score=365.15  Aligned_cols=254  Identities=27%  Similarity=0.437  Sum_probs=208.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++++.||+|+||+||+|++..+++.||||++....    .....+..|+.+++.+.      |+||+++++++.+.+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~~~~~~~~~~   74 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEAD------NPWVVKLYYSFQDEN   74 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCCcceEEEEEcCC
Confidence            36999999999999999999999999999999997532    22234566888887775      699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||+ +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++                 
T Consensus        75 ~~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~-----------------  135 (364)
T cd05599          75 YLYLIMEYLPGGDMMTLLMKKD--TFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD-----------------  135 (364)
T ss_pred             eEEEEECCCCCcHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC-----------------
Confidence            999999999 999999998765  599999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC-----------------------------------------CcccccCCCccch
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN-----------------------------------------HSSIVSTRHYRAP  259 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~-----------------------------------------~~~~~gt~~y~aP  259 (399)
                             .++.++|+|||++......                                         ....+||+.|+||
T Consensus       136 -------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aP  208 (364)
T cd05599         136 -------AKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAP  208 (364)
T ss_pred             -------CCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCH
Confidence                   4667888999876532110                                         1134699999999


Q ss_pred             hhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccc
Q 015867          260 EVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVS  339 (399)
Q Consensus       260 E~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  339 (399)
                      |++.+..++.++|||||||++|+|++|..||...+..+....+......                      ...|     
T Consensus       209 E~~~~~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~----------------------~~~~-----  261 (364)
T cd05599         209 EVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKET----------------------LQFP-----  261 (364)
T ss_pred             HHHcCCCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCc----------------------cCCC-----
Confidence            9999999999999999999999999999999887766555444321100                      0011     


Q ss_pred             hHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCC---HHHHhCCccccCCC
Q 015867          340 RESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT---ARQALNHPFFRNLN  398 (399)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~f~~~~  398 (399)
                                         ....++.++.+||.+||. ||.+|++   +.|+++||||++++
T Consensus       262 -------------------~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~~  303 (364)
T cd05599         262 -------------------DEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVD  303 (364)
T ss_pred             -------------------CCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence                               012457788999999997 9999998   99999999998763

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=3.2e-47  Score=357.90  Aligned_cols=245  Identities=24%  Similarity=0.420  Sum_probs=205.1

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|++..+++.||||+++...    ........|..++..+.     .|+||+++++++...+.+|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~iv~~~~~~~~~~~~~iv~   75 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-----NHPFLTQLYCCFQTPDRLFFVM   75 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcc-----CCCchhceeeEEEcCCEEEEEE
Confidence            46999999999999999999999999987532    12233445666665543     4799999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||+                        
T Consensus        76 Ey~~~g~L~~~i~~~~--~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli------------------------  129 (320)
T cd05590          76 EFVNGGDLMFHIQKSR--RFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLL------------------------  129 (320)
T ss_pred             cCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE------------------------
Confidence            999 899999998765  59999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.++|+|||++...   ........||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+.
T Consensus       130 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~  209 (320)
T cd05590         130 DHEGHCKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAIL  209 (320)
T ss_pred             CCCCcEEEeeCCCCeecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHh
Confidence            44667999999987642   223345679999999999999999999999999999999999999999887766665554


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....+                                                  +..++.++.+||.+||+.||.+|+
T Consensus       210 ~~~~~~--------------------------------------------------~~~~~~~~~~li~~~L~~dP~~R~  239 (320)
T cd05590         210 NDEVVY--------------------------------------------------PTWLSQDAVDILKAFMTKNPTMRL  239 (320)
T ss_pred             cCCCCC--------------------------------------------------CCCCCHHHHHHHHHHcccCHHHCC
Confidence            321111                                                  123567789999999999999999


Q ss_pred             CH------HHHhCCccccCC
Q 015867          384 TA------RQALNHPFFRNL  397 (399)
Q Consensus       384 t~------~ell~hp~f~~~  397 (399)
                      ++      +++++||||+++
T Consensus       240 ~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         240 GSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             CCCCCCCHHHHHcCCCcCCC
Confidence            98      899999999876

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=6.2e-47  Score=356.70  Aligned_cols=251  Identities=24%  Similarity=0.429  Sum_probs=208.9

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      |++++.||+|+||.||+|.+..+++.||||+++...    .....+..|.+++..+.   ...|+||+++++++...+..
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~---~l~hp~i~~~~~~~~~~~~~   77 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETAN---SERHPFLVNLFACFQTEDHV   77 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc---ccCCCChhceeeEEEcCCEE
Confidence            788999999999999999999999999999997532    12233445555555443   34689999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||||+ +++|..++...   .+++..+..++.||+.||+|||++||+||||||+|||+                    
T Consensus        78 ~lv~E~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill--------------------  134 (324)
T cd05589          78 CFVMEYAAGGDLMMHIHTD---VFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLL--------------------  134 (324)
T ss_pred             EEEEcCCCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEE--------------------
Confidence            9999999 99999888653   49999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                          +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+..
T Consensus       135 ----~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~  210 (324)
T cd05589         135 ----DTEGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVF  210 (324)
T ss_pred             ----CCCCcEEeCcccCCccCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                45678999999987642   22234567999999999999999999999999999999999999999987776655


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......                                                  .+..++..+.+||.+||+.||
T Consensus       211 ~~i~~~~~~--------------------------------------------------~p~~~~~~~~~li~~~L~~dP  240 (324)
T cd05589         211 DSIVNDEVR--------------------------------------------------YPRFLSREAISIMRRLLRRNP  240 (324)
T ss_pred             HHHHhCCCC--------------------------------------------------CCCCCCHHHHHHHHHHhhcCH
Confidence            554332211                                                  123457778999999999999


Q ss_pred             CCCC-----CHHHHhCCccccCCC
Q 015867          380 SERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       380 ~~R~-----t~~ell~hp~f~~~~  398 (399)
                      .+||     ++.++++||||++++
T Consensus       241 ~~R~~~~~~~~~~l~~~~~f~~~~  264 (324)
T cd05589         241 ERRLGSGEKDAEDVKKQPFFRDIN  264 (324)
T ss_pred             hHcCCCCCCCHHHHhhCCCcCCCC
Confidence            9999     799999999999863

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.3e-46  Score=359.57  Aligned_cols=292  Identities=27%  Similarity=0.453  Sum_probs=222.3

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||++...   ......+..|+.+++.+.      |+||+++++++..
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~   91 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVN------HKNIISLLNVFTP   91 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCC------CCCEeeeeeeecc
Confidence            4567899999999999999999999999999999998642   222344556777777764      5999999998865


Q ss_pred             C------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 R------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ~------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      .      ...|+||||++++|.+.+..    .+++..+..++.||+.||.|||++||+||||||+|||+           
T Consensus        92 ~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~-----------  156 (359)
T cd07876          92 QKSLEEFQDVYLVMELMDANLCQVIHM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-----------  156 (359)
T ss_pred             CCCccccceeEEEEeCCCcCHHHHHhc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE-----------
Confidence            4      35799999998888887743    48899999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                   +.++.++|+|||++.....  ......||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       157 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~  223 (359)
T cd07876         157 -------------KSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQ  223 (359)
T ss_pred             -------------CCCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCC
Confidence                         3467799999999865322  2345678999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+....+.+..+.++..+..........+....  ..++.... .+..     ..+............+.++.+||
T Consensus       224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~li  295 (359)
T cd07876         224 GTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENR--PQYPGISF-EELF-----PDWIFPSESERDKLKTSQARDLL  295 (359)
T ss_pred             CCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhC--CCCCCcch-hhhc-----cccccccccccccccchhHHHHH
Confidence            9888888888888887777665554432222221111  11111000 0000     00000000111223467789999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      .+||+.||.+|||+.|+|+||||+.
T Consensus       296 ~~mL~~dP~~R~t~~e~l~hp~~~~  320 (359)
T cd07876         296 SKMLVIDPDKRISVDEALRHPYITV  320 (359)
T ss_pred             HHHhccCcccCCCHHHHhcCchhhh
Confidence            9999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=5.5e-47  Score=356.94  Aligned_cols=251  Identities=24%  Similarity=0.395  Sum_probs=209.6

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +|++.+.||+|+||.||+|++..+++.||||+++....    .......|..++..+.     .|++|+.+++++...+.
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~~~~   75 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSG-----KPPFLTQLHSCFQTMDR   75 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCeEeeEEEEEecCCE
Confidence            48999999999999999999999999999999975321    1123344555555443     46899999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .|+||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||+                   
T Consensus        76 ~~lv~E~~~~g~L~~~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill-------------------  134 (323)
T cd05616          76 LYFVMEYVNGGDLMYQIQQVG--RFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML-------------------  134 (323)
T ss_pred             EEEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEE-------------------
Confidence            99999999 999999998765  59999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       135 -----~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~  209 (323)
T cd05616         135 -----DSEGHIKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDEL  209 (323)
T ss_pred             -----CCCCcEEEccCCCceecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHH
Confidence                 45677999999988642   2233456799999999999999999999999999999999999999998777666


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+......+                                                  +..++.++.+||.+||+.|
T Consensus       210 ~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~~l~~~  239 (323)
T cd05616         210 FQSIMEHNVAY--------------------------------------------------PKSMSKEAVAICKGLMTKH  239 (323)
T ss_pred             HHHHHhCCCCC--------------------------------------------------CCcCCHHHHHHHHHHcccC
Confidence            66554432211                                                  1245678899999999999


Q ss_pred             CCCCCC-----HHHHhCCccccCCC
Q 015867          379 PSERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t-----~~ell~hp~f~~~~  398 (399)
                      |.+|++     ..++++||||+.++
T Consensus       240 p~~R~~~~~~~~~~i~~h~~~~~~~  264 (323)
T cd05616         240 PGKRLGCGPEGERDIKEHAFFRYID  264 (323)
T ss_pred             HHhcCCCCCCCHHHHhcCCCcCCCC
Confidence            999998     48999999998764

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.8e-47  Score=356.27  Aligned_cols=242  Identities=32%  Similarity=0.523  Sum_probs=202.8

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      ||+|+||.||+|++..+++.||+|+++...    .....+..|..+++.+.      |+||+++++++...+..|+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e~   74 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVN------CPFIVPLKFSFQSPEKLYLVLAF   74 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCcEeceeeEEecCCeEEEEEcC
Confidence            799999999999999999999999986532    22234556777777664      69999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      + +++|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||+                        +.
T Consensus        75 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili------------------------~~  128 (312)
T cd05585          75 INGGELFHHLQREG--RFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILL------------------------DY  128 (312)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEE------------------------CC
Confidence            9 999999998765  59999999999999999999999999999999999999                        44


Q ss_pred             CCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Q 015867          229 SSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA  305 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~  305 (399)
                      ++.++|+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+...
T Consensus       129 ~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~  208 (312)
T cd05585         129 QGHIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQE  208 (312)
T ss_pred             CCcEEEEECcccccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcC
Confidence            6779999999886522   2234567999999999999999999999999999999999999999877665554444321


Q ss_pred             hCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC--
Q 015867          306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL--  383 (399)
Q Consensus       306 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~--  383 (399)
                      ..                                                  ..+..++.++.+||.+||..||.+||  
T Consensus       209 ~~--------------------------------------------------~~~~~~~~~~~~li~~~L~~dp~~R~~~  238 (312)
T cd05585         209 PL--------------------------------------------------RFPDGFDRDAKDLLIGLLSRDPTRRLGY  238 (312)
T ss_pred             CC--------------------------------------------------CCCCcCCHHHHHHHHHHcCCCHHHcCCC
Confidence            11                                                  11234577889999999999999997  


Q ss_pred             -CHHHHhCCccccCC
Q 015867          384 -TARQALNHPFFRNL  397 (399)
Q Consensus       384 -t~~ell~hp~f~~~  397 (399)
                       ++.|+++||||++.
T Consensus       239 ~~~~e~l~hp~~~~~  253 (312)
T cd05585         239 NGAQEIKNHPFFSQL  253 (312)
T ss_pred             CCHHHHHcCCCcCCC
Confidence             58999999999975

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.8e-47  Score=364.24  Aligned_cols=253  Identities=31%  Similarity=0.508  Sum_probs=211.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||+||+|++..+++.||||+++...    .....+..|.+++..+.      |+||+++++.+.+.+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~   74 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADAD------SPWIVKLYYSFQDEE   74 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcC------CCCccchhhheecCC
Confidence            36999999999999999999999999999999997532    22344566777777765      699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||+ +++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+                  
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll------------------  134 (350)
T cd05573          75 HLYLVMEYMPGGDLMNLLIRKD--VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILI------------------  134 (350)
T ss_pred             eEEEEEcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE------------------
Confidence            999999999 999999998764  69999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC--------------------------------CcccccCCCccchhhhhCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN--------------------------------HSSIVSTRHYRAPEVILGLGWS  268 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--------------------------------~~~~~gt~~y~aPE~~~~~~~~  268 (399)
                            +.++.++|+|||++......                                .....||+.|+|||++.+..++
T Consensus       135 ------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~  208 (350)
T cd05573         135 ------DADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYG  208 (350)
T ss_pred             ------CCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCC
Confidence                  44667999999987653322                                2345799999999999999999


Q ss_pred             CcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHh
Q 015867          269 YPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK  348 (399)
Q Consensus       269 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  348 (399)
                      .++|||||||++|+|++|+.||...+..+....+......                      ...|              
T Consensus       209 ~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~----------------------~~~p--------------  252 (350)
T cd05573         209 LECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKES----------------------LRFP--------------  252 (350)
T ss_pred             CceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCc----------------------ccCC--------------
Confidence            9999999999999999999999987766655554331100                      0000              


Q ss_pred             hhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCC-HHHHhCCccccCC
Q 015867          349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT-ARQALNHPFFRNL  397 (399)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t-~~ell~hp~f~~~  397 (399)
                                ....++.++.+||.+||. ||.+|++ ++++++||||+++
T Consensus       253 ----------~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         253 ----------PDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             ----------CCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence                      112357888999999997 9999999 9999999999976

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=6.7e-47  Score=364.20  Aligned_cols=254  Identities=28%  Similarity=0.418  Sum_probs=205.6

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .|++++.||+|+||+||+|++..+++.||||++....    .....+..|+++++.+.      |+||+++++.+.+.+.
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~l~~~~~~~~~   75 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEAD------NEWVVKLYYSFQDKDN   75 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcC------CCCeeeeEEEEecCCE
Confidence            5999999999999999999999999999999997532    22344666778877764      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+||||+ +++|.+++.+.+  .+++..++.++.||+.||+|||+.||+||||||+|||++                  
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~------------------  135 (381)
T cd05626          76 LYFVMDYIPGGDMMSLLIRME--VFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID------------------  135 (381)
T ss_pred             EEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC------------------
Confidence            99999999 999999998765  599999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCC--------------------------------------------------CCcccc
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQ--------------------------------------------------NHSSIV  251 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~--------------------------------------------------~~~~~~  251 (399)
                            .++.++|+|||++.....                                                  ...+.+
T Consensus       136 ------~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (381)
T cd05626         136 ------LDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLV  209 (381)
T ss_pred             ------CCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccccccccccc
Confidence                  456788888887532100                                                  012357


Q ss_pred             cCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCccc
Q 015867          252 STRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRL  331 (399)
Q Consensus       252 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  331 (399)
                      ||+.|+|||++.+..++.++|||||||++|||++|..||...+..+....+......                      .
T Consensus       210 gt~~Y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~----------------------~  267 (381)
T cd05626         210 GTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENT----------------------L  267 (381)
T ss_pred             CCccccCHHHHcCCCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccc----------------------c
Confidence            999999999999999999999999999999999999999887765554444321100                      0


Q ss_pred             CCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc--ccCCCCCCCHHHHhCCccccCCC
Q 015867          332 NWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL--RYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       332 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L--~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .+|                        ....++.++.+||.+|+  ..+|..|+|+.++++||||++++
T Consensus       268 ~~~------------------------~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~  312 (381)
T cd05626         268 HIP------------------------PQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVD  312 (381)
T ss_pred             CCC------------------------CCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCcccCCCC
Confidence            011                        11246788899999955  45566699999999999998753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=1.7e-46  Score=351.35  Aligned_cols=281  Identities=30%  Similarity=0.497  Sum_probs=225.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|.+.+.||+|+||.||+|++..+++.||+|.++...  ........|+++++.+.      |+||+++++++..++..
T Consensus         6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~   79 (309)
T cd07872           6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLK------HANIVTLHDIVHTDKSL   79 (309)
T ss_pred             CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCC------CCCcceEEEEEeeCCeE
Confidence            56999999999999999999999999999999986432  22234566888887775      59999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||+.++|.+++...+. .++...+..++.||+.||+|||++||+||||||+|||+                     
T Consensus        80 ~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill---------------------  137 (309)
T cd07872          80 TLVFEYLDKDLKQYMDDCGN-IMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLI---------------------  137 (309)
T ss_pred             EEEEeCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE---------------------
Confidence            99999997799998876543 58999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                         +.++.++|+|||++......   .....+|+.|+|||++.+ ..++.++|||||||++|+|++|++||.+.+..+..
T Consensus       138 ---~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~  214 (309)
T cd07872         138 ---NERGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDEL  214 (309)
T ss_pred             ---CCCCCEEECccccceecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence               34667999999988653222   234568999999999875 46899999999999999999999999999988889


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+....+.++...++..........     ...|..               .........+.++.++.+||.+||+.||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~L~~dp  274 (309)
T cd07872         215 HLIFRLLGTPTEETWPGISSNDEFKN-----YNFPKY---------------KPQPLINHAPRLDTEGIELLTKFLQYES  274 (309)
T ss_pred             HHHHHHhCCCCHHHHhhhcchhhhhh-----hhcCcc---------------CCCchhhhccCCCHHHHHHHHHhccCCh
Confidence            99999888887776655432211000     000000               0000011224577889999999999999


Q ss_pred             CCCCCHHHHhCCccccCC
Q 015867          380 SERLTARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~  397 (399)
                      .+|||+.|+++||||+.+
T Consensus       275 ~~R~t~~e~l~h~~~~~~  292 (309)
T cd07872         275 KKRISAEEAMKHAYFRSL  292 (309)
T ss_pred             hhCCCHHHHhcChhhhhc
Confidence            999999999999999975

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=4.3e-47  Score=365.85  Aligned_cols=253  Identities=30%  Similarity=0.477  Sum_probs=206.9

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +|++++.||+|+||+||+|++..+++.||+|++....    .....+..|+.+++.+.      |+||+++++.+.+.+.
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~------h~~iv~~~~~~~~~~~   75 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEAD------NEWVVRLYYSFQDKDN   75 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCC------CCcCCeEEEEEEeCCE
Confidence            5999999999999999999999999999999997532    22345666777877764      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+||||+ +++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||++                  
T Consensus        76 ~~lv~E~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~------------------  135 (382)
T cd05625          76 LYFVMDYIPGGDMMSLLIRMG--IFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID------------------  135 (382)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC------------------
Confidence            99999999 999999998765  589999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCC--------------------------------------------------CCCcccc
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDN--------------------------------------------------QNHSSIV  251 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~--------------------------------------------------~~~~~~~  251 (399)
                            .++.++|+|||++....                                                  ....+.+
T Consensus       136 ------~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  209 (382)
T cd05625         136 ------RDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLV  209 (382)
T ss_pred             ------CCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccc
Confidence                  45678888888753110                                                  0012357


Q ss_pred             cCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCccc
Q 015867          252 STRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRL  331 (399)
Q Consensus       252 gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  331 (399)
                      ||+.|+|||++.+..++.++|||||||++|||++|++||.+.+..+....+.......                      
T Consensus       210 gt~~Y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~----------------------  267 (382)
T cd05625         210 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSL----------------------  267 (382)
T ss_pred             cCcccCCHHHhcCCCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCc----------------------
Confidence            9999999999999999999999999999999999999998877665554443211100                      


Q ss_pred             CCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCC---HHHHhCCccccCCC
Q 015867          332 NWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT---ARQALNHPFFRNLN  398 (399)
Q Consensus       332 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~f~~~~  398 (399)
                      ..|                        ....+++++.+||.+|+ .||.+|++   +.++++||||++++
T Consensus       268 ~~p------------------------~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~  312 (382)
T cd05625         268 HIP------------------------PQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFFKTID  312 (382)
T ss_pred             CCC------------------------CcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcC
Confidence            011                        11346778899999987 59999997   99999999998763

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=6.8e-47  Score=355.09  Aligned_cols=246  Identities=25%  Similarity=0.441  Sum_probs=202.6

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|++..+++.||+|+++...    ........|..++...     ..|++|+++++++.+.+..|+||
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~~~~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA-----WENPFLTHLYCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----cCCCCccCeeEEEEeCCEEEEEE
Confidence            46999999999999999999999999997532    1223344455555443     25799999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||+                        
T Consensus        76 E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~------------------------  129 (316)
T cd05620          76 EFLNGGDLMFHIQDKG--RFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVML------------------------  129 (316)
T ss_pred             CCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE------------------------
Confidence            999 999999998765  58999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.++|+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.
T Consensus       130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~  209 (316)
T cd05620         130 DRDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR  209 (316)
T ss_pred             CCCCCEEeCccCCCeecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            44667999999987642   223345679999999999999999999999999999999999999998777655544443


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....                                                  .+..++.++.+||.+||+.||.+|+
T Consensus       210 ~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~dP~~R~  239 (316)
T cd05620         210 VDTPH--------------------------------------------------YPRWITKESKDILEKLFERDPTRRL  239 (316)
T ss_pred             hCCCC--------------------------------------------------CCCCCCHHHHHHHHHHccCCHHHcC
Confidence            21111                                                  1123567789999999999999999


Q ss_pred             CH-HHHhCCccccCCC
Q 015867          384 TA-RQALNHPFFRNLN  398 (399)
Q Consensus       384 t~-~ell~hp~f~~~~  398 (399)
                      ++ +++++||||++++
T Consensus       240 ~~~~~~~~h~~f~~~~  255 (316)
T cd05620         240 GVVGNIRGHPFFKTIN  255 (316)
T ss_pred             CChHHHHcCCCcCCCC
Confidence            98 5899999998863

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-47  Score=364.37  Aligned_cols=254  Identities=28%  Similarity=0.427  Sum_probs=205.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++++.||+|+||.||+|.+..+++.||||++.....    ....+..|+++++.+      +|+||+++++++.+.+
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l------~hp~iv~~~~~~~~~~   74 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAES------DSPWVVSLYYSFQDAQ   74 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhC------CCCCcceEEEEEEcCC
Confidence            369999999999999999999999999999999865322    223455677777665      4699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||+ +++|.+++...+  .+++..++.++.|++.||+|||+.||+||||||+|||++                 
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~-----------------  135 (377)
T cd05629          75 YLYLIMEFLPGGDLMTMLIKYD--TFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID-----------------  135 (377)
T ss_pred             eeEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC-----------------
Confidence            999999999 999999998765  699999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC--------------------------------------------------CCccc
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ--------------------------------------------------NHSSI  250 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~--------------------------------------------------~~~~~  250 (399)
                             .++.++|+|||++.....                                                  .....
T Consensus       136 -------~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  208 (377)
T cd05629         136 -------RGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYST  208 (377)
T ss_pred             -------CCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhccccccccc
Confidence                   456688888887642100                                                  00124


Q ss_pred             ccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcc
Q 015867          251 VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSR  330 (399)
Q Consensus       251 ~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~  330 (399)
                      +||+.|+|||++.+..++.++|||||||++|||++|.+||...+..+....+.....                      .
T Consensus       209 ~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~----------------------~  266 (377)
T cd05629         209 VGTPDYIAPEIFLQQGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRE----------------------T  266 (377)
T ss_pred             CCCccccCHHHHccCCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCC----------------------c
Confidence            699999999999999999999999999999999999999988776665554432110                      0


Q ss_pred             cCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC---CCHHHHhCCccccCCC
Q 015867          331 LNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER---LTARQALNHPFFRNLN  398 (399)
Q Consensus       331 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R---~t~~ell~hp~f~~~~  398 (399)
                      ..+|.                        ...++.++.+||.+||. +|.+|   +|+.|+++||||++++
T Consensus       267 ~~~p~------------------------~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~  312 (377)
T cd05629         267 LYFPD------------------------DIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVD  312 (377)
T ss_pred             cCCCC------------------------CCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCC
Confidence            11111                        12356788999999998 77776   5999999999998763

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=3.4e-47  Score=365.84  Aligned_cols=253  Identities=28%  Similarity=0.436  Sum_probs=207.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +|++++.||+|+||.||+|++..+++.||||++....    .....+..|+++++.+.      |+||+++++.+.+.+.
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------h~~iv~~~~~~~~~~~   75 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEAD------NEWVVKLYYSFQDKDN   75 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCC------CCCcceEEEEEEcCCE
Confidence            6999999999999999999999999999999986532    12344667888888775      5899999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+||||+ +++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||++                  
T Consensus        76 ~~lv~E~~~~g~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~------------------  135 (376)
T cd05598          76 LYFVMDYIPGGDMMSLLIRLG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID------------------  135 (376)
T ss_pred             EEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC------------------
Confidence            99999999 999999998765  589999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCC----------------------------------------------CCCcccccCCC
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDN----------------------------------------------QNHSSIVSTRH  255 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~----------------------------------------------~~~~~~~gt~~  255 (399)
                            .++.++|+|||++....                                              ......+||+.
T Consensus       136 ------~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~  209 (376)
T cd05598         136 ------RDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPN  209 (376)
T ss_pred             ------CCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCcc
Confidence                  46678999999763210                                              00123579999


Q ss_pred             ccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCC
Q 015867          256 YRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE  335 (399)
Q Consensus       256 y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~  335 (399)
                      |+|||++.+..++.++|||||||++|+|++|+.||.+.+..+....+......                      ...  
T Consensus       210 y~aPE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~----------------------~~~--  265 (376)
T cd05598         210 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETT----------------------LHI--  265 (376)
T ss_pred             ccCHHHHcCCCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCcc----------------------ccC--
Confidence            99999999999999999999999999999999999887766554443221100                      000  


Q ss_pred             CccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC---CHHHHhCCccccCCC
Q 015867          336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL---TARQALNHPFFRNLN  398 (399)
Q Consensus       336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~ell~hp~f~~~~  398 (399)
                                            .....++.++.+||.+|+ .||.+|+   |+.++++||||++++
T Consensus       266 ----------------------~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~~  308 (376)
T cd05598         266 ----------------------PSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGID  308 (376)
T ss_pred             ----------------------CCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCCC
Confidence                                  111346778899999977 5999999   999999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=5.8e-47  Score=357.33  Aligned_cols=244  Identities=26%  Similarity=0.473  Sum_probs=203.2

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||++.+..+++.||+|++....    .....+..|+++++.+      .|+||+++++.+...+..|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~~~~~~~~~~~~~lv~   74 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNT------RHPFLTSLKYSFQTKDRLCFVM   74 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCcceEEEEEcCCEEEEEE
Confidence            46999999999999999999999999997532    1223445566666665      4699999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||+                        
T Consensus        75 Ey~~~g~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll------------------------  128 (328)
T cd05593          75 EYVNGGELFFHLSRER--VFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLML------------------------  128 (328)
T ss_pred             eCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEE------------------------
Confidence            999 999999987765  59999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.
T Consensus       129 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~  208 (328)
T cd05593         129 DKDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  208 (328)
T ss_pred             CCCCcEEEecCcCCccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhc
Confidence            446779999999886532   22245679999999999999999999999999999999999999998766655444332


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      ....                                                  ..+..++.++.+||.+||+.||.+|+
T Consensus       209 ~~~~--------------------------------------------------~~p~~~~~~~~~li~~~L~~dP~~R~  238 (328)
T cd05593         209 MEDI--------------------------------------------------KFPRTLSADAKSLLSGLLIKDPNKRL  238 (328)
T ss_pred             cCCc--------------------------------------------------cCCCCCCHHHHHHHHHHcCCCHHHcC
Confidence            2111                                                  11234577889999999999999997


Q ss_pred             -----CHHHHhCCccccCC
Q 015867          384 -----TARQALNHPFFRNL  397 (399)
Q Consensus       384 -----t~~ell~hp~f~~~  397 (399)
                           ++.++++||||.+.
T Consensus       239 ~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         239 GGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence                 89999999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=7.3e-47  Score=355.78  Aligned_cols=245  Identities=24%  Similarity=0.398  Sum_probs=205.6

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|++..+++.||||++....    ........|.+++..+.     .|++|+.+++++...+..|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~i~~~~~~~~~~~~~~lv~   75 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAA-----KHPFLTALHCCFQTKDRLFFVM   75 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcCCeEEEEE
Confidence            46999999999999999999999999997532    12233455666666543     4799999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+                        
T Consensus        76 E~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill------------------------  129 (321)
T cd05591          76 EYVNGGDLMFQIQRSR--KFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILL------------------------  129 (321)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE------------------------
Confidence            999 899999998765  59999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.++|+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....+.
T Consensus       130 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~  209 (321)
T cd05591         130 DAEGHCKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESIL  209 (321)
T ss_pred             CCCCCEEEeecccceecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHH
Confidence            45678999999987642   222345679999999999999999999999999999999999999999887766665554


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....+                                                  +..++.++.+||.+||+.||.+|+
T Consensus       210 ~~~~~~--------------------------------------------------p~~~~~~~~~ll~~~L~~dp~~R~  239 (321)
T cd05591         210 HDDVLY--------------------------------------------------PVWLSKEAVSILKAFMTKNPNKRL  239 (321)
T ss_pred             cCCCCC--------------------------------------------------CCCCCHHHHHHHHHHhccCHHHcC
Confidence            321111                                                  123567789999999999999999


Q ss_pred             -------CHHHHhCCccccCC
Q 015867          384 -------TARQALNHPFFRNL  397 (399)
Q Consensus       384 -------t~~ell~hp~f~~~  397 (399)
                             ++.++++||||+.+
T Consensus       240 ~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         240 GCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             CCCCCCCCHHHHhcCCccCCC
Confidence                   99999999999875

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=7.7e-47  Score=355.81  Aligned_cols=245  Identities=27%  Similarity=0.471  Sum_probs=204.1

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||++.+..+|+.||+|+++...    .....+..|.++++.+.      ||||+++++.+...+..|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~i~~~~~~~~~~~~~~lv~   74 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR------HPFLTALKYAFQTHDRLCFVM   74 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCC------CCCCcceeeEEecCCEEEEEE
Confidence            46999999999999999999999999997532    12233455777776664      599999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|..++...+  .+++..++.++.||+.||+|||++||+||||||+|||+                        
T Consensus        75 E~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll------------------------  128 (323)
T cd05595          75 EYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML------------------------  128 (323)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE------------------------
Confidence            999 999999987765  59999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.+||+|||++....   .......||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+.
T Consensus       129 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~  208 (323)
T cd05595         129 DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL  208 (323)
T ss_pred             cCCCCEEecccHHhccccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence            446779999999876422   12234679999999999999999999999999999999999999998776655554443


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....                                                  .+..++.++.+||.+||+.||.+|+
T Consensus       209 ~~~~~--------------------------------------------------~p~~~~~~~~~li~~~L~~dP~~R~  238 (323)
T cd05595         209 MEEIR--------------------------------------------------FPRTLSPEAKSLLAGLLKKDPKQRL  238 (323)
T ss_pred             cCCCC--------------------------------------------------CCCCCCHHHHHHHHHHccCCHHHhC
Confidence            21111                                                  1134577889999999999999998


Q ss_pred             -----CHHHHhCCccccCCC
Q 015867          384 -----TARQALNHPFFRNLN  398 (399)
Q Consensus       384 -----t~~ell~hp~f~~~~  398 (399)
                           ++.++++||||.+++
T Consensus       239 ~~~~~~~~~~l~h~~~~~~~  258 (323)
T cd05595         239 GGGPSDAKEVMEHRFFLSIN  258 (323)
T ss_pred             CCCCCCHHHHHcCCCcCCCC
Confidence                 899999999998753

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=3.9e-46  Score=356.89  Aligned_cols=291  Identities=27%  Similarity=0.447  Sum_probs=222.5

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +.++|++.+.||+|+||.||+|.+..+++.||||++...   .........|+.+++.+.      |+||+.+++.+...
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~ii~~~~~~~~~   95 (364)
T cd07875          22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HKNIIGLLNVFTPQ   95 (364)
T ss_pred             hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcC------CCCccccceeeccc
Confidence            467899999999999999999999999999999998642   122344566777777664      58999999877543


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          141 ------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       141 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                            ...|+||||++++|.+.+..    .+++..+..++.|++.||+|||++||+||||||+|||+            
T Consensus        96 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll------------  159 (364)
T cd07875          96 KSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV------------  159 (364)
T ss_pred             ccccccCeEEEEEeCCCCCHHHHHHh----cCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEE------------
Confidence                  36799999998889888754    47889999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                  +.++.+||+|||++......  .....||..|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus       160 ------------~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~  227 (364)
T cd07875         160 ------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG  227 (364)
T ss_pred             ------------CCCCcEEEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence                        34677999999998764432  2456789999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....+....+.+...+..........+.......  ....     .... ................+..+++||.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~dll~  299 (364)
T cd07875         228 TDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKY--AGYS-----FEKL-FPDVLFPADSEHNKLKASQARDLLS  299 (364)
T ss_pred             CCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCc--CCCC-----hHhh-CccccccccccccccccHHHHHHHH
Confidence            998888888888877776666555433222221111000  0000     0000 0000000011112234567899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +||+.||.+|||+.|+|+||||..
T Consensus       300 ~mL~~dP~~R~t~~e~L~hp~~~~  323 (364)
T cd07875         300 KMLVIDASKRISVDEALQHPYINV  323 (364)
T ss_pred             HhcCcCcccCCCHHHHhcCccccc
Confidence            999999999999999999999975

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=1.6e-46  Score=352.61  Aligned_cols=246  Identities=26%  Similarity=0.422  Sum_probs=202.3

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|.+..+++.||||+++....    .......|..++..+     ..|+||+++++++...+..|+||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~hp~i~~~~~~~~~~~~~~lv~   75 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALA-----WEHPFLTHLFCTFQTKEHLFFVM   75 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhc-----cCCCCccceeeEEEcCCEEEEEE
Confidence            469999999999999999999999999975321    122233444444433     25799999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ |++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+                        
T Consensus        76 e~~~gg~L~~~~~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill------------------------  129 (316)
T cd05592          76 EYLNGGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL------------------------  129 (316)
T ss_pred             cCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEE------------------------
Confidence            999 999999998765  59999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.
T Consensus       130 ~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~  209 (316)
T cd05592         130 DKDGHIKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSIL  209 (316)
T ss_pred             CCCCCEEEccCcCCeECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            44677999999988642   223345679999999999999999999999999999999999999999877766555543


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....                                                  .+..++.++.+||.+||+.||.+||
T Consensus       210 ~~~~~--------------------------------------------------~~~~~~~~~~~ll~~~l~~~P~~R~  239 (316)
T cd05592         210 NDRPH--------------------------------------------------FPRWISKEAKDCLSKLFERDPTKRL  239 (316)
T ss_pred             cCCCC--------------------------------------------------CCCCCCHHHHHHHHHHccCCHHHcC
Confidence            22111                                                  1123567788999999999999999


Q ss_pred             CH-HHHhCCccccCCC
Q 015867          384 TA-RQALNHPFFRNLN  398 (399)
Q Consensus       384 t~-~ell~hp~f~~~~  398 (399)
                      ++ .++++||||+.++
T Consensus       240 ~~~~~l~~h~~~~~~~  255 (316)
T cd05592         240 GVDGDIRQHPFFRGID  255 (316)
T ss_pred             CChHHHHcCcccCCCC
Confidence            86 5899999998763

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=3.9e-46  Score=355.78  Aligned_cols=291  Identities=26%  Similarity=0.443  Sum_probs=221.4

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +.++|++.+.||+|+||.||+|.+..+++.||||.+....   ........|+.+++.+.      |+||+++++++...
T Consensus        15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~   88 (355)
T cd07874          15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HKNIISLLNVFTPQ   88 (355)
T ss_pred             hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhC------CCchhceeeeeecc
Confidence            5678999999999999999999999999999999986422   22345556777777765      59999999987643


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          141 ------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       141 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                            ...|+||||+.++|.+.+..    .+++..+..++.|++.||+|||++||+||||||+|||++           
T Consensus        89 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~-----------  153 (355)
T cd07874          89 KSLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK-----------  153 (355)
T ss_pred             ccccccceeEEEhhhhcccHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEC-----------
Confidence                  35799999997788887754    488999999999999999999999999999999999993           


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                   .++.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus       154 -------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  220 (355)
T cd07874         154 -------------SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG  220 (355)
T ss_pred             -------------CCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                         4667999999998764332  2456799999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....+....+.+...+..........+......  +.. .......     .+.............+.++.+||.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~li~  292 (355)
T cd07874         221 RDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK--YAG-LTFPKLF-----PDSLFPADSEHNKLKASQARDLLS  292 (355)
T ss_pred             CCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCc--ccc-ccchhhc-----cccccccccccccccchHHHHHHH
Confidence            88888877777777766655554443222222111100  000 0000000     000001111222344677899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +||+.||.+|||+.|+|+||||..
T Consensus       293 ~mL~~dP~~Rps~~ell~hp~~~~  316 (355)
T cd07874         293 KMLVIDPAKRISVDEALQHPYINV  316 (355)
T ss_pred             HHhcCCchhcCCHHHHhcCcchhc
Confidence            999999999999999999999974

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=5.8e-46  Score=351.10  Aligned_cols=294  Identities=26%  Similarity=0.357  Sum_probs=214.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .++|++++.||+|+||.||++.+..++..||+|++....  .....+..|+++++.+.      |+||+++++++..++.
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~   77 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN------SPYIVGFYGAFYSDGE   77 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC------CCCCCeEEEEEEECCE
Confidence            467999999999999999999999999999999987532  23456777888888775      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .++||||+ +++|.+++....  .+++..+..++.|++.||.|||+. +|+||||||+|||++                 
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~-----------------  138 (331)
T cd06649          78 ISICMEHMDGGSLDQVLKEAK--RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN-----------------  138 (331)
T ss_pred             EEEEeecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc-----------------
Confidence            99999999 899999998765  589999999999999999999986 599999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCC-CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDN-QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                             .++.++|+|||++.... .......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+..
T Consensus       139 -------~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~  211 (331)
T cd06649         139 -------SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELE  211 (331)
T ss_pred             -------CCCcEEEccCcccccccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                   46679999999876532 2334567999999999999999999999999999999999999999876654433


Q ss_pred             HHHHHHhCCCCHHHHHHhccccc---ccccCCcccCCCCCccchHHHHHHHhhhhhhh--hhhccchhhhhHHHHHHHHc
Q 015867          300 AMMERALGPLPEHMIRRASRGTE---KYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN--MVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....................   ...........+.     ...  ......+..  ........++.++.+||.+|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~  284 (331)
T cd06649         212 AIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPA-----MAI--FELLDYIVNEPPPKLPNGVFTPDFQEFVNKC  284 (331)
T ss_pred             HHhcccccccccCCccccCcccccccccccccccccccc-----hhH--HHHHHHHHhCCCcCCCCccccHHHHHHHHHH
Confidence            32211100000000000000000   0000000000000     000  000001111  11111235778899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      |+.||.+|||+.||++||||+..
T Consensus       285 L~~~P~~Rpt~~ell~h~~~~~~  307 (331)
T cd06649         285 LIKNPAERADLKMLMNHTFIKRS  307 (331)
T ss_pred             ccCCcccCCCHHHHhcChHHhhc
Confidence            99999999999999999999864

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=2.1e-46  Score=351.63  Aligned_cols=246  Identities=25%  Similarity=0.424  Sum_probs=203.1

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|++..+++.||||+++...    ........|..++..+     ..||||+++++++.+.+..++||
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~-----~~hp~iv~~~~~~~~~~~~~lv~   75 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-----WEHPFLTHLYCTFQTKENLFFVM   75 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhc-----cCCCcCcceEEEEEeCCEEEEEE
Confidence            46999999999999999999999999997532    1223344455555443     35799999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||+                        
T Consensus        76 ey~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~------------------------  129 (316)
T cd05619          76 EYLNGGDLMFHIQSCH--KFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILL------------------------  129 (316)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEE------------------------
Confidence            999 999999998754  58999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.++|+|||++...   ........||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+.
T Consensus       130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~  209 (316)
T cd05619         130 DTDGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR  209 (316)
T ss_pred             CCCCCEEEccCCcceECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            44667999999987642   223345679999999999999999999999999999999999999998877655555443


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....                                                  .+..++.++.+||.+||+.||.+||
T Consensus       210 ~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~~P~~R~  239 (316)
T cd05619         210 MDNPC--------------------------------------------------YPRWLTREAKDILVKLFVREPERRL  239 (316)
T ss_pred             hCCCC--------------------------------------------------CCccCCHHHHHHHHHHhccCHhhcC
Confidence            22111                                                  1123566789999999999999999


Q ss_pred             CHH-HHhCCccccCCC
Q 015867          384 TAR-QALNHPFFRNLN  398 (399)
Q Consensus       384 t~~-ell~hp~f~~~~  398 (399)
                      ++. ++++||||++++
T Consensus       240 ~~~~~l~~h~~~~~~~  255 (316)
T cd05619         240 GVKGDIRQHPFFREID  255 (316)
T ss_pred             CChHHHHcCcccCCCC
Confidence            996 899999998864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.7e-46  Score=356.51  Aligned_cols=283  Identities=27%  Similarity=0.520  Sum_probs=223.6

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|++++.||+|+||.||+|.+..+++.||||++....   .....+..|+++++.+.      |+||+++++++..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~   85 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMK------HENVIGLLDVFTP   85 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcC------CCchhhhhhhhcc
Confidence            34578999999999999999999999999999999986432   12234556888887775      5899999987754


Q ss_pred             C------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 R------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ~------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      .      ...|++|++++++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||+           
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~-----------  151 (343)
T cd07878          86 ATSIENFNEVYLVTNLMGADLNNIVKCQ---KLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAV-----------  151 (343)
T ss_pred             cccccccCcEEEEeecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEE-----------
Confidence            3      457999999999999888643   49999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                   +.++.+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+
T Consensus       152 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  218 (343)
T cd07878         152 -------------NEDCELRILDFGLARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPG  218 (343)
T ss_pred             -------------CCCCCEEEcCCccceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCC
Confidence                         44677999999998876666667789999999999987 5789999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+.+..+....+..+..............+...    .|..             ..  ..........++.+.+||.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-------------~~--~~~~~~~~~~~~~~~~li~  279 (343)
T cd07878         219 NDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQS----LPHM-------------PQ--QDLKKIFRGANPLAIDLLE  279 (343)
T ss_pred             CCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhc----cccc-------------cc--hhHHHhccCCCHHHHHHHH
Confidence            888888888888877777665544322111100000    0000             00  0000111234567899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||+.||.+|||+.|+|+||||.+.
T Consensus       280 ~mL~~dp~~R~s~~ell~hp~~~~~  304 (343)
T cd07878         280 KMLVLDSDKRISASEALAHPYFSQY  304 (343)
T ss_pred             HHcCCChhhCCCHHHHhcCcchhcc
Confidence            9999999999999999999999875

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=3.6e-46  Score=351.26  Aligned_cols=251  Identities=24%  Similarity=0.390  Sum_probs=209.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +|++.+.||+|+||.||+|.+..+++.||+|++.....    .......|..++..+.     +|++|+++++++...+.
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~i~~~~~~~~~~~~   75 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQD-----KPPFLTQLHSCFQTVDR   75 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCchhheeeEEecCCE
Confidence            47899999999999999999999999999999975321    1233455666666554     35788899999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||+                   
T Consensus        76 ~~lv~Ey~~~g~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill-------------------  134 (323)
T cd05615          76 LYFVMEYVNGGDLMYHIQQVG--KFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVML-------------------  134 (323)
T ss_pred             EEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEE-------------------
Confidence            99999999 999999998765  59999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           +.++.++|+|||++....   .......||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+....
T Consensus       135 -----~~~~~ikL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~  209 (323)
T cd05615         135 -----DSEGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL  209 (323)
T ss_pred             -----CCCCCEEEeccccccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHH
Confidence                 446779999999876532   223456799999999999999999999999999999999999999988776666


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.......                                                  +..++.++.+|+.+||+.|
T Consensus       210 ~~~i~~~~~~~--------------------------------------------------p~~~~~~~~~li~~~l~~~  239 (323)
T cd05615         210 FQSIMEHNVSY--------------------------------------------------PKSLSKEAVSICKGLMTKH  239 (323)
T ss_pred             HHHHHhCCCCC--------------------------------------------------CccCCHHHHHHHHHHcccC
Confidence            55554322111                                                  1245677899999999999


Q ss_pred             CCCCCC-----HHHHhCCccccCCC
Q 015867          379 PSERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t-----~~ell~hp~f~~~~  398 (399)
                      |.+|++     .+++++||||+.++
T Consensus       240 p~~R~~~~~~~~~~i~~h~~f~~~~  264 (323)
T cd05615         240 PSKRLGCGPEGERDIREHAFFRRID  264 (323)
T ss_pred             HhhCCCCCCCCHHHHhcCcccCCCC
Confidence            999997     57999999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=6.4e-46  Score=346.22  Aligned_cols=283  Identities=31%  Similarity=0.504  Sum_probs=224.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||.|+||.||+|.+..+++.||+|.++...  ........|+.+++.+.      |+||+++++++...+..
T Consensus         6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~nI~~~~~~~~~~~~~   79 (301)
T cd07873           6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK------HANIVTLHDIIHTEKSL   79 (301)
T ss_pred             cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcC------CCCcceEEEEEecCCeE
Confidence            57999999999999999999999999999999986432  22334567888888775      59999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||++++|.+++..... .+++..+..++.||+.||+|||+.||+|+||||+|||+                     
T Consensus        80 ~lv~e~~~~~l~~~l~~~~~-~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~---------------------  137 (301)
T cd07873          80 TLVFEYLDKDLKQYLDDCGN-SINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLI---------------------  137 (301)
T ss_pred             EEEEeccccCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEE---------------------
Confidence            99999998899998876543 58999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                         +.++.++|+|||++.....   ......+++.|+|||++.+. .++.++|||||||++|+|++|++||...+..+..
T Consensus       138 ---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~  214 (301)
T cd07873         138 ---NERGELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQL  214 (301)
T ss_pred             ---CCCCcEEECcCcchhccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence               3466799999998765322   12334678999999998764 5889999999999999999999999998888888


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+....+.++...+....+.....     ...+|...               ........+.++.++.+||.+||+.||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---------------~~~~~~~~~~~~~~~~~li~~ml~~dp  274 (301)
T cd07873         215 HFIFRILGTPTEETWPGILSNEEFK-----SYNYPKYR---------------ADCLHNHAPRLDSDGAELLSKLLQFEG  274 (301)
T ss_pred             HHHHHHcCCCChhhchhhhcccccc-----ccccCccc---------------cccHHhhcCCCCHHHHHHHHHHhcCCc
Confidence            8888887776665554432211100     00011100               000011224567889999999999999


Q ss_pred             CCCCCHHHHhCCccccCCCC
Q 015867          380 SERLTARQALNHPFFRNLNE  399 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~~e  399 (399)
                      .+|||++|+++||||+.+.|
T Consensus       275 ~~R~t~~eil~h~~f~~~~~  294 (301)
T cd07873         275 RKRISAEEAMKHPYFHCLGE  294 (301)
T ss_pred             ccCcCHHHHhcCcccccccc
Confidence            99999999999999998865

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=2.3e-46  Score=354.08  Aligned_cols=254  Identities=28%  Similarity=0.456  Sum_probs=202.9

Q ss_pred             CEEEEeeeccccceEEEEEEEc---cCCeEEEEEEEecchh-----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           67 RYKILSKMGEGTFGRVLECWDR---QTQERVAIKVVRSIRK-----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      +|++.+.||+|+||.||++++.   .+++.||+|++.....     .......|.++++.+.     +|++|+.+++++.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~~i~~~~~~~~   75 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVR-----QSPFLVTLHYAFQ   75 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCcccEEEEEe
Confidence            4899999999999999998864   4789999999975321     2234566777877775     3689999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      ..+.+++||||+ +++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+               
T Consensus        76 ~~~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili---------------  138 (332)
T cd05614          76 TEAKLHLILDYVSGGEMFTHLYQRD--NFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILL---------------  138 (332)
T ss_pred             cCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEE---------------
Confidence            999999999999 999999998765  59999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC----CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ----NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                               +.++.++|+|||++.....    .....+||+.|+|||++.+. .++.++|||||||++|+|++|..||..
T Consensus       139 ---------~~~~~~kl~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~  209 (332)
T cd05614         139 ---------DSEGHVVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTL  209 (332)
T ss_pred             ---------CCCCCEEEeeCcCCccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCC
Confidence                     3466799999998865321    22346799999999999875 488999999999999999999999975


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .........+.....                                              ......+..++..+.+||.
T Consensus       210 ~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~~li~  243 (332)
T cd05614         210 EGERNTQSEVSRRIL----------------------------------------------KCDPPFPSFIGPEAQDLLH  243 (332)
T ss_pred             CCCCCCHHHHHHHHh----------------------------------------------cCCCCCCCCCCHHHHHHHH
Confidence            332211111111000                                              0001112346778899999


Q ss_pred             HccccCCCCCC-----CHHHHhCCccccCC
Q 015867          373 GLLRYDPSERL-----TARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~-----t~~ell~hp~f~~~  397 (399)
                      +||+.||.+||     +++++++||||++.
T Consensus       244 ~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         244 KLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             HHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            99999999999     88899999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.2e-46  Score=359.77  Aligned_cols=254  Identities=25%  Similarity=0.417  Sum_probs=207.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++++.||+|+||.||+|.+..+++.||||+++...    .....+..|..++..+.      |++|+++++.+.+.+
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~iv~~~~~~~~~~   74 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEAD------GAWVVKMFYSFQDKR   74 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCC------CCCEeeEEEEEEcCC
Confidence            36999999999999999999999999999999997532    12234556777776664      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||+ |++|.+++.+.+  .+++..++.++.|++.||+|||++||+||||||+|||++                 
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~-----------------  135 (360)
T cd05627          75 NLYLIMEFLPGGDMMTLLMKKD--TLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD-----------------  135 (360)
T ss_pred             EEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC-----------------
Confidence            999999999 999999998765  599999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC--------------------------------------CcccccCCCccchhhh
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN--------------------------------------HSSIVSTRHYRAPEVI  262 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--------------------------------------~~~~~gt~~y~aPE~~  262 (399)
                             .++.++|+|||++......                                      ....+||+.|+|||++
T Consensus       136 -------~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~  208 (360)
T cd05627         136 -------AKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVF  208 (360)
T ss_pred             -------CCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHH
Confidence                   4667899999976532110                                      1235799999999999


Q ss_pred             hCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHH
Q 015867          263 LGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES  342 (399)
Q Consensus       263 ~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  342 (399)
                      .+..++.++|||||||++|+|++|..||...+..+....+......                      ..+|.       
T Consensus       209 ~~~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~----------------------~~~p~-------  259 (360)
T cd05627         209 MQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKET----------------------LVFPP-------  259 (360)
T ss_pred             cCCCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCc----------------------eecCC-------
Confidence            9999999999999999999999999999887776665555321100                      01110       


Q ss_pred             HHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC---CHHHHhCCccccCCC
Q 015867          343 IKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL---TARQALNHPFFRNLN  398 (399)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---t~~ell~hp~f~~~~  398 (399)
                                       ...++.++.+||.+|+. ||.+|+   ++.++++||||++++
T Consensus       260 -----------------~~~~s~~~~~li~~l~~-~p~~R~~~~~~~ei~~hp~f~~~~  300 (360)
T cd05627         260 -----------------EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFFEGVD  300 (360)
T ss_pred             -----------------CCCCCHHHHHHHHHhcc-ChhhcCCCCCHHHHhcCCCCCCCC
Confidence                             01356788999999874 999998   489999999999864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-48  Score=339.91  Aligned_cols=251  Identities=28%  Similarity=0.497  Sum_probs=219.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|..++.||+|.||.|-+|+.+.+++.||+|++++..    ..-.....|-++|+..+      ||.+..+-..|+..+
T Consensus       168 ~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~------HPFLt~LKYsFQt~d  241 (516)
T KOG0690|consen  168 EDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCR------HPFLTSLKYSFQTQD  241 (516)
T ss_pred             chhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhcc------CcHHHHhhhhhccCc
Confidence            47899999999999999999999999999999997632    22233445777777664      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||+ ||.|+-++.+.+  .|++..++.+..+|+.||.|||+++||+||||.+|+|+                  
T Consensus       242 rlCFVMeyanGGeLf~HLsrer--~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlL------------------  301 (516)
T KOG0690|consen  242 RLCFVMEYANGGELFFHLSRER--VFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLL------------------  301 (516)
T ss_pred             eEEEEEEEccCceEeeehhhhh--cccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhhee------------------
Confidence            999999999 999999888766  69999999999999999999999999999999999998                  


Q ss_pred             CCcccCCCCCceEEeecCCccc---CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAF---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                            ++++++||+|||+++.   .+....++||||.|.|||++....|+.++|+|.+||++|||++|++||...+...
T Consensus       302 ------DkDGHIKitDFGLCKE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~k  375 (516)
T KOG0690|consen  302 ------DKDGHIKITDFGLCKEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEK  375 (516)
T ss_pred             ------ccCCceEeeecccchhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhH
Confidence                  6788899999999865   4556789999999999999999999999999999999999999999999888766


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....|.-...                                                  .++..++++++.|+..+|..
T Consensus       376 LFeLIl~ed~--------------------------------------------------kFPr~ls~eAktLLsGLL~k  405 (516)
T KOG0690|consen  376 LFELILMEDL--------------------------------------------------KFPRTLSPEAKTLLSGLLKK  405 (516)
T ss_pred             HHHHHHhhhc--------------------------------------------------cCCccCCHHHHHHHHHHhhc
Confidence            6665544332                                                  23356789999999999999


Q ss_pred             CCCCCCC-----HHHHhCCccccCCC
Q 015867          378 DPSERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       378 dP~~R~t-----~~ell~hp~f~~~~  398 (399)
                      ||.+|+.     +.|+.+|+||.+++
T Consensus       406 dP~kRLGgGpdDakEi~~h~FF~~v~  431 (516)
T KOG0690|consen  406 DPKKRLGGGPDDAKEIMRHRFFASVD  431 (516)
T ss_pred             ChHhhcCCCchhHHHHHhhhhhccCC
Confidence            9999984     88999999999875

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.5e-46  Score=358.48  Aligned_cols=254  Identities=25%  Similarity=0.443  Sum_probs=209.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++.+.||+|+||.||+|++..+++.||+|++....    .....+..|+.+++.+.      |+||+++++++.+.
T Consensus        42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~------h~~iv~~~~~~~~~  115 (370)
T cd05596          42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHAN------SEWIVQLHYAFQDD  115 (370)
T ss_pred             HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCC------CCCcceEEEEEecC
Confidence            457999999999999999999999999999999996532    12233556777777664      69999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..|+||||+ |++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||+                 
T Consensus       116 ~~~~lv~Ey~~gg~L~~~l~~~---~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl-----------------  175 (370)
T cd05596         116 KYLYMVMEYMPGGDLVNLMSNY---DIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL-----------------  175 (370)
T ss_pred             CEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE-----------------
Confidence            9999999999 99999998764   38999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCC----CCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGL----GWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~----~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                             +.++.+||+|||++......    ....+||+.|+|||++.+.    .++.++|||||||++|+|++|..||.
T Consensus       176 -------~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~  248 (370)
T cd05596         176 -------DKSGHLKLADFGTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFY  248 (370)
T ss_pred             -------cCCCCEEEEeccceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcC
Confidence                   45678999999988653321    2356799999999998754    48899999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+.......|.....                      ...+|.                        ...+|.++.+||
T Consensus       249 ~~~~~~~~~~i~~~~~----------------------~~~~~~------------------------~~~~s~~~~~li  282 (370)
T cd05596         249 ADSLVGTYSKIMDHKN----------------------SLTFPD------------------------DIEISKQAKDLI  282 (370)
T ss_pred             CCCHHHHHHHHHcCCC----------------------cCCCCC------------------------cCCCCHHHHHHH
Confidence            8776665555533211                      111221                        124678899999


Q ss_pred             HHccccCCCC--CCCHHHHhCCccccCC
Q 015867          372 HGLLRYDPSE--RLTARQALNHPFFRNL  397 (399)
Q Consensus       372 ~~~L~~dP~~--R~t~~ell~hp~f~~~  397 (399)
                      .+||+.+|.+  |+|+.++++||||++.
T Consensus       283 ~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         283 CAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             HHHccChhhccCCCCHHHHhcCcccCCC
Confidence            9999999988  9999999999999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=3.7e-46  Score=358.07  Aligned_cols=281  Identities=27%  Similarity=0.482  Sum_probs=221.3

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC--
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN--  141 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--  141 (399)
                      +|++.+.||+|+||.||++.+..+++.||||.+....   .....+..|+++++.++      |+||+++++++...+  
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~   74 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFK------HDNVLSALDILQPPHID   74 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCC------CCCcCCHhheecCCCcc
Confidence            4788999999999999999999999999999985421   22345667888877765      599999999998766  


Q ss_pred             ---eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          142 ---HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       142 ---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                         ..|+||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+                
T Consensus        75 ~~~~~~lv~e~~~~~l~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili----------------  136 (372)
T cd07853          75 PFEEIYVVTELMQSDLHKIIVSPQ--PLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLV----------------  136 (372)
T ss_pred             ccceEEEEeeccccCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEE----------------
Confidence               789999999889999887655  59999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                              +.++.+||+|||++......    .....+|+.|+|||++.+. .++.++|||||||++|+|++|+.||.+.
T Consensus       137 --------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  208 (372)
T cd07853         137 --------NSNCVLKICDFGLARVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQ  208 (372)
T ss_pred             --------CCCCCEEeccccceeecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCC
Confidence                    44678999999988653222    2334689999999999875 5899999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+.+..|....+.++...+................. .|                ... .........+.++.+||.+
T Consensus       209 ~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~----------------~~~-~~~~~~~~~~~~~~~li~~  270 (372)
T cd07853         209 SPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHK-PP----------------SLP-VLYTLSSQATHEAVHLLCR  270 (372)
T ss_pred             CHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCC-CC----------------chH-HhcccCCCCCHHHHHHHHH
Confidence            99999999998888777654443322111111111000 00                000 0001123457788999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||+.||.+|||+.|+++||||++.
T Consensus       271 mL~~dP~~R~t~~e~l~hp~~~~~  294 (372)
T cd07853         271 MLVFDPDKRISAADALAHPYLDEG  294 (372)
T ss_pred             hCCCChhhCcCHHHHhcCHhhCCC
Confidence            999999999999999999999873

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=3.5e-46  Score=350.62  Aligned_cols=246  Identities=25%  Similarity=0.418  Sum_probs=205.1

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||+||+|++..+++.||||+++...    ........|.++++.+.     .|+||+++++++...+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~-----~h~~i~~~~~~~~~~~~~~lv~   75 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAG-----KHPFLTQLHSCFQTKDRLFFVM   75 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhcc-----CCCCccceeeEEEcCCEEEEEE
Confidence            46999999999999999999999999997532    22334556667766654     5799999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|..++.+.+  .+++..+..++.||+.||.|||++||+||||||+|||+                        
T Consensus        76 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill------------------------  129 (318)
T cd05570          76 EYVNGGDLMFHIQRSG--RFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLL------------------------  129 (318)
T ss_pred             cCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEE------------------------
Confidence            999 999999988765  59999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.++|+|||++...   .......+||+.|+|||++.+..++.++|+|||||++|+|++|..||.+.+..+....+.
T Consensus       130 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~  209 (318)
T cd05570         130 DSEGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL  209 (318)
T ss_pred             CCCCcEEecccCCCeecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence            44667999999987542   222345679999999999999999999999999999999999999998777655544443


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....                                                  .+..++..+.+||.+||+.||.+||
T Consensus       210 ~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~dP~~R~  239 (318)
T cd05570         210 EDEVR--------------------------------------------------YPRWLSKEAKSILKSFLTKNPEKRL  239 (318)
T ss_pred             cCCCC--------------------------------------------------CCCcCCHHHHHHHHHHccCCHHHcC
Confidence            21111                                                  1124567789999999999999999


Q ss_pred             CH-----HHHhCCccccCCC
Q 015867          384 TA-----RQALNHPFFRNLN  398 (399)
Q Consensus       384 t~-----~ell~hp~f~~~~  398 (399)
                      |+     .++++||||+.++
T Consensus       240 s~~~~~~~~ll~~~~~~~~~  259 (318)
T cd05570         240 GCLPTGEQDIKGHPFFREID  259 (318)
T ss_pred             CCCCCCHHHHhcCCCcCCCC
Confidence            99     9999999998753

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=1.4e-46  Score=354.40  Aligned_cols=244  Identities=27%  Similarity=0.466  Sum_probs=201.6

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|.+..+++.||+|++.....    .......|.++++.+      .|+||+++++.+...+..|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~------~hp~i~~~~~~~~~~~~~~lv~   74 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS------RHPFLTALKYSFQTHDRLCFVM   74 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCCceEEEEEcCCEEEEEE
Confidence            469999999999999999999999999975321    122334455555554      4699999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      ||+ +++|.+++...+  .+++..+..++.||+.||+|||+ .||+||||||+|||+                       
T Consensus        75 E~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll-----------------------  129 (325)
T cd05594          75 EYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML-----------------------  129 (325)
T ss_pred             eCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEE-----------------------
Confidence            999 999999987765  59999999999999999999997 799999999999999                       


Q ss_pred             CCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                       +.++.+||+|||++....   .......||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+
T Consensus       130 -~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i  208 (325)
T cd05594         130 -DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI  208 (325)
T ss_pred             -CCCCCEEEecCCCCeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHH
Confidence             456779999999876422   2234567999999999999999999999999999999999999999877665544443


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      ......                                                  .+..++.++.+||.+||+.||.+|
T Consensus       209 ~~~~~~--------------------------------------------------~p~~~~~~~~~li~~~L~~dP~~R  238 (325)
T cd05594         209 LMEEIR--------------------------------------------------FPRTLSPEAKSLLSGLLKKDPKQR  238 (325)
T ss_pred             hcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHhhcCHHHh
Confidence            221111                                                  113457788999999999999999


Q ss_pred             C-----CHHHHhCCccccCC
Q 015867          383 L-----TARQALNHPFFRNL  397 (399)
Q Consensus       383 ~-----t~~ell~hp~f~~~  397 (399)
                      +     ++.++++||||+++
T Consensus       239 ~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         239 LGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             CCCCCCCHHHHhcCCCcCCC
Confidence            7     89999999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=4.9e-46  Score=351.27  Aligned_cols=254  Identities=24%  Similarity=0.424  Sum_probs=200.0

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|++..+++.||||+++...    .....+..|..++..+.     +||||+++++++.+.+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~-----~hp~Iv~~~~~~~~~~~~~lv~   75 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETAS-----NHPFLVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcc-----CCCCCCceEEEEEcCCEEEEEE
Confidence            46999999999999999999999999997532    12234556777776664     4799999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+                        
T Consensus        76 e~~~~g~L~~~~~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili------------------------  129 (329)
T cd05588          76 EFVSGGDLMFHMQRQR--KLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLL------------------------  129 (329)
T ss_pred             eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE------------------------
Confidence            999 999999987765  69999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.++|+|||++...   .......+||+.|+|||++.+..++.++|+|||||++|+|++|+.||......+....  
T Consensus       130 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~--  207 (329)
T cd05588         130 DAEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQ--  207 (329)
T ss_pred             CCCCCEEECcCccccccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccc--
Confidence            34677999999987642   2233456899999999999999999999999999999999999999964221100000  


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                          ..........                                   .......+..++.++.+||.+||+.||.+|+
T Consensus       208 ----~~~~~~~~~~-----------------------------------~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~  248 (329)
T cd05588         208 ----NTEDYLFQVI-----------------------------------LEKQIRIPRSLSVKASSVLKGFLNKDPKERL  248 (329)
T ss_pred             ----cchHHHHHHH-----------------------------------HcCCCCCCCCCCHHHHHHHHHHhccCHHHcC
Confidence                0000000000                                   0000112235677889999999999999999


Q ss_pred             C------HHHHhCCccccCC
Q 015867          384 T------ARQALNHPFFRNL  397 (399)
Q Consensus       384 t------~~ell~hp~f~~~  397 (399)
                      |      ++++++||||+.+
T Consensus       249 ~~~~~~~~~~i~~hp~~~~~  268 (329)
T cd05588         249 GCHPQTGFRDIKSHPFFRNI  268 (329)
T ss_pred             CCCCCCCHHHHhcCCCCCCC
Confidence            7      7899999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=4.2e-46  Score=356.64  Aligned_cols=256  Identities=25%  Similarity=0.437  Sum_probs=208.0

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ...++|++.+.||+|+||.||++.+..+++.||+|++.+...    ....+..|..+++.+      .||||+++++.+.
T Consensus        40 ~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~------~hp~iv~~~~~~~  113 (370)
T cd05621          40 MKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA------NSPWVVQLFCAFQ  113 (370)
T ss_pred             CCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhC------CCCCEeeEEEEEE
Confidence            335689999999999999999999999999999999865221    223355677777665      4699999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +++..|+||||+ +++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||+               
T Consensus       114 ~~~~~~lv~Ey~~gg~L~~~l~~~---~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl---------------  175 (370)
T cd05621         114 DDKYLYMVMEYMPGGDLVNLMSNY---DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL---------------  175 (370)
T ss_pred             cCCEEEEEEcCCCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE---------------
Confidence            999999999999 99999999764   38999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCC----CCCcchhHHHHHHHHHHHhCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~ell~g~~P  289 (399)
                               +.++.+||+|||++......    ..+.+||+.|+|||++.+..    ++.++|+|||||++|+|++|..|
T Consensus       176 ---------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~P  246 (370)
T cd05621         176 ---------DKHGHLKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTP  246 (370)
T ss_pred             ---------CCCCCEEEEecccceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCC
Confidence                     45678999999998754322    23567999999999997643    78999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+.......+.....                      ...+|.                        ...++..+++
T Consensus       247 f~~~~~~~~~~~i~~~~~----------------------~~~~p~------------------------~~~~s~~~~~  280 (370)
T cd05621         247 FYADSLVGTYSKIMDHKN----------------------SLNFPE------------------------DVEISKHAKN  280 (370)
T ss_pred             CCCCCHHHHHHHHHhCCc----------------------ccCCCC------------------------cccCCHHHHH
Confidence            988777666555543211                      111221                        1235777899


Q ss_pred             HHHHccccCCCC--CCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSE--RLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~--R~t~~ell~hp~f~~~  397 (399)
                      ||.+||..++.+  |+|+.|+++||||++.
T Consensus       281 li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         281 LICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             HHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            999999865543  8999999999999863

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=2e-46  Score=354.18  Aligned_cols=255  Identities=29%  Similarity=0.446  Sum_probs=208.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||+||+|.+..+++.||||+++....    ....+..|..+++.+      .|++|+++++.+.+.+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~------~~~~i~~~~~~~~~~~   74 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSIS------NSPWIPQLQYAFQDKD   74 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhC------CCCCCcceeeEEecCC
Confidence            369999999999999999999999999999999975432    233455566666654      4699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||+ +++|.+++.+... .+++..+..++.||+.||+|||+.||+||||||+|||+                  
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~-~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll------------------  135 (330)
T cd05601          75 NLYLVMEYQPGGDLLSLLNRYED-QFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLI------------------  135 (330)
T ss_pred             eEEEEECCCCCCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEE------------------
Confidence            999999999 9999999987632 69999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhh------CCCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVIL------GLGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~------~~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                            +.++.+||+|||++.......    ....||+.|+|||++.      +..++.++|||||||++|+|++|..||
T Consensus       136 ------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf  209 (330)
T cd05601         136 ------DRTGHIKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPF  209 (330)
T ss_pred             ------CCCCCEEeccCCCCeECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCC
Confidence                  456789999999986543221    2346899999999987      456889999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      ...+.......+.....                      ...+|.                        .+.++.++.+|
T Consensus       210 ~~~~~~~~~~~i~~~~~----------------------~~~~~~------------------------~~~~~~~~~~l  243 (330)
T cd05601         210 HEGTSAKTYNNIMNFQR----------------------FLKFPE------------------------DPKVSSDFLDL  243 (330)
T ss_pred             CCCCHHHHHHHHHcCCC----------------------ccCCCC------------------------CCCCCHHHHHH
Confidence            88776655554432210                      001111                        13467888999


Q ss_pred             HHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          371 LHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      |.+||. ||.+|||++++++||||+.++
T Consensus       244 i~~ll~-~p~~R~t~~~l~~h~~~~~~~  270 (330)
T cd05601         244 IQSLLC-GQKERLGYEGLCCHPFFSKID  270 (330)
T ss_pred             HHHHcc-ChhhCCCHHHHhCCCCcCCCC
Confidence            999998 999999999999999999764

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-48  Score=355.22  Aligned_cols=249  Identities=27%  Similarity=0.431  Sum_probs=212.4

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .|+.++.||+|+||.||+|.+..+++.||||++.....  .-...+.|+.++..+..      +||.+.|+.|..+..++
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~------~~it~yygsyl~g~~Lw   87 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDS------PNITEYYGSYLKGTKLW   87 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCc------chHHhhhhheeecccHH
Confidence            48888999999999999999999999999999975332  22445667778877764      89999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++|||| ||++.++++...  .+.+..+..++++++.||.|||.++.+|||||+.|||+.                    
T Consensus        88 iiMey~~gGsv~~lL~~~~--~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s--------------------  145 (467)
T KOG0201|consen   88 IIMEYCGGGSVLDLLKSGN--ILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS--------------------  145 (467)
T ss_pred             HHHHHhcCcchhhhhccCC--CCccceeeeehHHHHHHhhhhhhcceecccccccceeEe--------------------
Confidence            999999 999999998876  458888999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                          ..+.+||+|||.+.....   ...+++||+.|||||++.+..|+.++||||||++.+||++|.+|+....++.++.
T Consensus       146 ----~~g~vkl~DfgVa~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlf  221 (467)
T KOG0201|consen  146 ----ESGDVKLADFGVAGQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLF  221 (467)
T ss_pred             ----ccCcEEEEecceeeeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEE
Confidence                357899999998876433   2378999999999999999899999999999999999999999998877755444


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .|.+..   |+                                              .....+|+.+++||..||..||.
T Consensus       222 lIpk~~---PP----------------------------------------------~L~~~~S~~~kEFV~~CL~k~P~  252 (467)
T KOG0201|consen  222 LIPKSA---PP----------------------------------------------RLDGDFSPPFKEFVEACLDKNPE  252 (467)
T ss_pred             eccCCC---CC----------------------------------------------ccccccCHHHHHHHHHHhhcCcc
Confidence            332211   11                                              11135678899999999999999


Q ss_pred             CCCCHHHHhCCccccC
Q 015867          381 ERLTARQALNHPFFRN  396 (399)
Q Consensus       381 ~R~t~~ell~hp~f~~  396 (399)
                      .||+|.+||.|+|++.
T Consensus       253 ~RpsA~~LLKh~FIk~  268 (467)
T KOG0201|consen  253 FRPSAKELLKHKFIKR  268 (467)
T ss_pred             cCcCHHHHhhhHHHHh
Confidence            9999999999999986

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-45  Score=341.11  Aligned_cols=255  Identities=25%  Similarity=0.397  Sum_probs=209.3

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .|++.+.||+|+||+||++.+..+++.||||++.....    ....+..|+.+++.+.      |++|+.+++.+..++.
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~   74 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN------SRFVVSLAYAYETKDA   74 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcC------CCCEeeeeeeecCCCe
Confidence            48999999999999999999988999999999865321    1233456888887775      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|.+++.......+++..+..++.|++.||.|||++||+||||||+||++                   
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~-------------------  135 (285)
T cd05605          75 LCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILL-------------------  135 (285)
T ss_pred             EEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEE-------------------
Confidence            99999999 8999998876554569999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           +.++.++|+|||++.....  .....+|+..|+|||++.+..++.++|+||+||++|+|++|..||.+.+.....
T Consensus       136 -----~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~  210 (285)
T cd05605         136 -----DDYGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR  210 (285)
T ss_pred             -----CCCCCEEEeeCCCceecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHH
Confidence                 3467799999998865432  223457899999999999989999999999999999999999999876554333


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.......+                                              ...+..++..+.+||.+||+.||
T Consensus       211 ~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~~~P  244 (285)
T cd05605         211 EEVERRVKEDQ----------------------------------------------EEYSEKFSEAARSICRQLLTKDP  244 (285)
T ss_pred             HHHHHHhhhcc----------------------------------------------cccCcccCHHHHHHHHHHccCCH
Confidence            33222111000                                              01123467788999999999999


Q ss_pred             CCCC-----CHHHHhCCccccCC
Q 015867          380 SERL-----TARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~-----t~~ell~hp~f~~~  397 (399)
                      .+||     +++++++||||...
T Consensus       245 ~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         245 GFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             HHhcCCCCCCHHHHhcCcCccCC
Confidence            9999     89999999999875

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-48  Score=383.25  Aligned_cols=255  Identities=29%  Similarity=0.499  Sum_probs=219.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEec---c-hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---I-RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|.|++.||+|+||.|.+++.+.+++.||+|++++   . ......|..|..|+..-      ..+-|++++..|+++
T Consensus        74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~------ns~Wiv~LhyAFQD~  147 (1317)
T KOG0612|consen   74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFG------NSEWIVQLHYAFQDE  147 (1317)
T ss_pred             HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcC------CcHHHHHHHHHhcCc
Confidence            4689999999999999999999999999999999976   2 23345566677777553      347999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      .++|+||||+ ||+|..++.+..  .+|+..++.|+.+|+.||.-||+.|+|||||||+||||                 
T Consensus       148 ~~LYlVMdY~pGGDlltLlSk~~--~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLl-----------------  208 (1317)
T KOG0612|consen  148 RYLYLVMDYMPGGDLLTLLSKFD--RLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLL-----------------  208 (1317)
T ss_pred             cceEEEEecccCchHHHHHhhcC--CChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEe-----------------
Confidence            9999999999 999999999887  69999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhh----C-CCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVIL----G-LGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~----~-~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                             +..|++||+|||.+...+..    ....+|||.|.|||++.    + ..|++.+|+||+||++|||+.|..||
T Consensus       209 -------d~~GHikLADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPF  281 (1317)
T KOG0612|consen  209 -------DKSGHIKLADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPF  281 (1317)
T ss_pred             -------cccCcEeeccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcc
Confidence                   56888999999987654322    35678999999999996    3 46999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      ......+++.+|.....                      .+.+|.                        ...+|.++++|
T Consensus       282 YadslveTY~KIm~hk~----------------------~l~FP~------------------------~~~VSeeakdL  315 (1317)
T KOG0612|consen  282 YADSLVETYGKIMNHKE----------------------SLSFPD------------------------ETDVSEEAKDL  315 (1317)
T ss_pred             hHHHHHHHHHHHhchhh----------------------hcCCCc------------------------ccccCHHHHHH
Confidence            99999999999976511                      122231                        12478999999


Q ss_pred             HHHccccCCCCCCC---HHHHhCCccccCCC
Q 015867          371 LHGLLRYDPSERLT---ARQALNHPFFRNLN  398 (399)
Q Consensus       371 i~~~L~~dP~~R~t---~~ell~hp~f~~~~  398 (399)
                      |++++ .+|..|++   ++++..||||.+++
T Consensus       316 I~~ll-~~~e~RLgrngiedik~HpFF~g~~  345 (1317)
T KOG0612|consen  316 IEALL-CDREVRLGRNGIEDIKNHPFFEGID  345 (1317)
T ss_pred             HHHHh-cChhhhcccccHHHHHhCccccCCC
Confidence            99988 48899998   99999999999974

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=6.7e-46  Score=349.48  Aligned_cols=244  Identities=27%  Similarity=0.443  Sum_probs=203.2

Q ss_pred             eeeccccceEEEEEEEc---cCCeEEEEEEEecch-----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           72 SKMGEGTFGRVLECWDR---QTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +.||+|+||.||+|++.   .+++.||||+++...     ........|+.+++.+.      ||||+++++.+..++..
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~iv~~~~~~~~~~~~   75 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVK------HPFIVDLIYAFQTGGKL   75 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCC------CCchhceeeEEecCCeE
Confidence            67999999999999863   468899999997532     12234556778887775      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||||+ +++|.+++.+.+  .+++..+..++.||+.||+|||++||+||||||+|||+                    
T Consensus        76 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~--------------------  133 (323)
T cd05584          76 YLILEYLSGGELFMHLEREG--IFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILL--------------------  133 (323)
T ss_pred             EEEEeCCCCchHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE--------------------
Confidence            9999999 899999998766  58999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                          +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.....
T Consensus       134 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~  209 (323)
T cd05584         134 ----DAQGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTI  209 (323)
T ss_pred             ----CCCCCEEEeeCcCCeecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHH
Confidence                44678999999987642   22233467999999999999999999999999999999999999999887765555


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......                                                  .++.++.++.+||.+||+.||
T Consensus       210 ~~~~~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~~p  239 (323)
T cd05584         210 DKILKGKLN--------------------------------------------------LPPYLTPEARDLLKKLLKRNP  239 (323)
T ss_pred             HHHHcCCCC--------------------------------------------------CCCCCCHHHHHHHHHHcccCH
Confidence            544332111                                                  113456778999999999999


Q ss_pred             CCCC-----CHHHHhCCccccCC
Q 015867          380 SERL-----TARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~-----t~~ell~hp~f~~~  397 (399)
                      .+||     ++.++++||||+..
T Consensus       240 ~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         240 SSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             hHcCCCCCCCHHHHhcCCCcCCC
Confidence            9999     89999999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=9.3e-46  Score=349.27  Aligned_cols=250  Identities=24%  Similarity=0.430  Sum_probs=198.7

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|++..+++.||+|+++...    .....+..|..++..+.     +|+||+++++++...+..|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~hp~iv~~~~~~~~~~~~~lv~   75 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTESRLFFVI   75 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcC-----CCCcCCceeeEEEeCCEEEEEE
Confidence            46999999999999999999999999997532    12233455666665543     5799999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|..++...+  .+++..++.++.||+.||+|||++||+||||||+|||+                        
T Consensus        76 E~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili------------------------  129 (329)
T cd05618          76 EYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL------------------------  129 (329)
T ss_pred             eCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEE------------------------
Confidence            999 999999887765  59999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH-----H
Q 015867          227 PKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE-----H  298 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-----~  298 (399)
                      +.++.++|+|||++...   .......+||+.|+|||++.+..++.++|+|||||++|+|++|..||.......     .
T Consensus       130 ~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~  209 (329)
T cd05618         130 DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNT  209 (329)
T ss_pred             CCCCCEEEeeCCccccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCccccc
Confidence            45677999999988642   222345679999999999999999999999999999999999999995321100     0


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.+.           .                                   .......+..++..+.+||.+||+.|
T Consensus       210 ~~~~~~~-----------i-----------------------------------~~~~~~~p~~~~~~~~~ll~~~L~~d  243 (329)
T cd05618         210 EDYLFQV-----------I-----------------------------------LEKQIRIPRSLSVKAASVLKSFLNKD  243 (329)
T ss_pred             HHHHHHH-----------H-----------------------------------hcCCCCCCCCCCHHHHHHHHHHhcCC
Confidence            0000000           0                                   00001122356778899999999999


Q ss_pred             CCCCCC------HHHHhCCccccCCC
Q 015867          379 PSERLT------ARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t------~~ell~hp~f~~~~  398 (399)
                      |.+|+|      +.++++||||++++
T Consensus       244 P~~R~~~~~~~~~~~i~~hp~f~~~~  269 (329)
T cd05618         244 PKERLGCHPQTGFADIQGHPFFRNVD  269 (329)
T ss_pred             HHHcCCCCCCCCHHHHhcCCCCCCCC
Confidence            999998      58999999998763

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=2.3e-45  Score=344.95  Aligned_cols=283  Identities=26%  Similarity=0.474  Sum_probs=208.8

Q ss_pred             EeeeccccceEEEEEEEc--cCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--CCeEEEE
Q 015867           71 LSKMGEGTFGRVLECWDR--QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--RNHICIV  146 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--~~~~~lv  146 (399)
                      .++||+|+||+||+|++.  .+++.||+|.+.... .......|+++++.+.      |+||+++++.+..  +...|+|
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~~~lv   78 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG-ISMSACREIALLRELK------HPNVISLQKVFLSHADRKVWLL   78 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC-CcHHHHHHHHHHHhcC------CCCCcceeeeEecCCCcEEEEE
Confidence            367999999999999865  467899999986532 2345667888888885      5999999998854  4678999


Q ss_pred             EccCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          147 FEKLGPSLFDFLKRNK-------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       147 ~e~~~~~L~~~l~~~~-------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      |||++++|.+++....       ...+++..++.++.||+.||+|||++||+||||||+|||+..++             
T Consensus        79 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~-------------  145 (317)
T cd07868          79 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG-------------  145 (317)
T ss_pred             EeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCC-------------
Confidence            9999889999886432       12489999999999999999999999999999999999995432             


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                             +..+.+||+|||++......      .....||+.|+|||++.+. .++.++|||||||++|+|++|.+||..
T Consensus       146 -------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~  218 (317)
T cd07868         146 -------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC  218 (317)
T ss_pred             -------CCcCcEEEeecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccC
Confidence                   34678999999998754322      2346789999999999874 589999999999999999999999975


Q ss_pred             CCc---------HHHHHHHHHHhCCCCHHHHHHhcccccccc--cCCcccCCCCCccchHHHHHHHhhhhhhhhhhccch
Q 015867          293 HEN---------LEHLAMMERALGPLPEHMIRRASRGTEKYF--RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD  361 (399)
Q Consensus       293 ~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (399)
                      ...         .+.+..+....+.++...+...........  ..-....+..              ............
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~  284 (317)
T cd07868         219 RQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTN--------------CSLIKYMEKHKV  284 (317)
T ss_pred             CcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCc--------------ccccchHHhcCC
Confidence            432         355667777777666665554322111000  0000000000              000000111112


Q ss_pred             hhhhHHHHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       362 ~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ..+.++.+||.+||+.||.+|||++|+|+||||
T Consensus       285 ~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07868         285 KPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF  317 (317)
T ss_pred             CCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            345678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=6.5e-46  Score=353.87  Aligned_cols=250  Identities=26%  Similarity=0.401  Sum_probs=198.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++++.||+|+||.||+|.+..+++.||||++....  .....+..|+++++.+.      |+||+++++++...+.+
T Consensus        74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~  147 (353)
T PLN00034         74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVN------HPNVVKCHDMFDHNGEI  147 (353)
T ss_pred             HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCC------CCCcceeeeEeccCCeE
Confidence            56899999999999999999999999999999986432  23455677888887775      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+..      ..++..+..++.||+.||+|||++||+||||||+|||+                    
T Consensus       148 ~lv~e~~~~~~L~~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll--------------------  201 (353)
T PLN00034        148 QVLLEFMDGGSLEGTH------IADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLI--------------------  201 (353)
T ss_pred             EEEEecCCCCcccccc------cCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEE--------------------
Confidence            9999999 88886421      36778888999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                          +.++.+||+|||++......   ....+||..|+|||++..     ...+.++|||||||++|+|++|+.||....
T Consensus       202 ----~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~  277 (353)
T PLN00034        202 ----NSAKNVKIADFGVSRILAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGR  277 (353)
T ss_pred             ----cCCCCEEEcccccceecccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCC
Confidence                34677999999988654322   245679999999998743     234578999999999999999999997433


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....+......                                              ........++.++.+||.+|
T Consensus       278 ~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~l~~li~~~  311 (353)
T PLN00034        278 QGDWASLMCAICMS----------------------------------------------QPPEAPATASREFRHFISCC  311 (353)
T ss_pred             CccHHHHHHHHhcc----------------------------------------------CCCCCCCccCHHHHHHHHHH
Confidence            32221111111000                                              00011235677899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      |+.||.+|||+.|+++||||.+-
T Consensus       312 l~~~P~~Rpt~~ell~hp~~~~~  334 (353)
T PLN00034        312 LQREPAKRWSAMQLLQHPFILRA  334 (353)
T ss_pred             ccCChhhCcCHHHHhcCcccccC
Confidence            99999999999999999999863

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-47  Score=344.32  Aligned_cols=257  Identities=26%  Similarity=0.435  Sum_probs=220.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      +.|..-+.||+||||.|+-|..+.||+-||+|.+.+.    .........|..+|+.+..      +.||.+-..|+..+
T Consensus       185 n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s------~FiVslaYAfeTkd  258 (591)
T KOG0986|consen  185 NTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSS------PFIVSLAYAFETKD  258 (591)
T ss_pred             cceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhcc------CcEEEEeeeecCCC
Confidence            4688999999999999999999999999999988542    2333456678888888754      79999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+||||..| ||+|.-+|.+.+...|++..++.|+.+|+.||++||+.+||+||+||+|||+                  
T Consensus       259 ~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILL------------------  320 (591)
T KOG0986|consen  259 ALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILL------------------  320 (591)
T ss_pred             ceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheee------------------
Confidence            999999999 9999999998887789999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                            |..++++|+|+|+|.....  .....+||.+|||||++.+..|+...|+|||||++|||+.|+.||........
T Consensus       321 ------Dd~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk  394 (591)
T KOG0986|consen  321 ------DDHGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVK  394 (591)
T ss_pred             ------ccCCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhh
Confidence                  5678899999999976443  33455899999999999999999999999999999999999999987665544


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.+...                                              ....++++.+|++++++++.+|+.|
T Consensus       395 ~eEvdrr~~----------------------------------------------~~~~ey~~kFS~eakslc~~LL~Kd  428 (591)
T KOG0986|consen  395 REEVDRRTL----------------------------------------------EDPEEYSDKFSEEAKSLCEGLLTKD  428 (591)
T ss_pred             HHHHHHHHh----------------------------------------------cchhhcccccCHHHHHHHHHHHccC
Confidence            444433221                                              1223455788999999999999999


Q ss_pred             CCCCC-----CHHHHhCCccccCCC
Q 015867          379 PSERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~-----t~~ell~hp~f~~~~  398 (399)
                      |.+|+     +++++.+||||+++|
T Consensus       429 p~~RLGcrg~ga~evk~HpfFk~ln  453 (591)
T KOG0986|consen  429 PEKRLGCRGEGAQEVKEHPFFKDLN  453 (591)
T ss_pred             HHHhccCCCcCcchhhhCcccccCC
Confidence            99998     478999999999986

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=1e-45  Score=348.29  Aligned_cols=244  Identities=28%  Similarity=0.451  Sum_probs=199.6

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchhh----hHHHHHHHHH-HHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY----RDAAMIEIDV-LQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~-l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      +.||+|+||+||+|.+..+++.||||++......    ......|..+ ++.      ..|+||+++++.+...+..|+|
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~------l~hp~iv~~~~~~~~~~~~~lv   74 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKN------VKHPFLVGLHYSFQTADKLYFV   74 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhh------CCCCCCCCeeEEEEeCCEEEEE
Confidence            4699999999999999999999999999753211    1222223222 222      3579999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||+                       
T Consensus        75 ~e~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll-----------------------  129 (323)
T cd05575          75 LDYVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILL-----------------------  129 (323)
T ss_pred             EcCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEE-----------------------
Confidence            9999 999999998765  69999999999999999999999999999999999999                       


Q ss_pred             CCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                       +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+
T Consensus       130 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i  208 (323)
T cd05575         130 -DSQGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNI  208 (323)
T ss_pred             -CCCCcEEEeccCCCcccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHH
Confidence             44677999999987642   22234567999999999999999999999999999999999999999887765555444


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      .....                                                  ...+.++..+.+||.+||+.||.+|
T Consensus       209 ~~~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R  238 (323)
T cd05575         209 LNKPL--------------------------------------------------RLKPNISVSARHLLEGLLQKDRTKR  238 (323)
T ss_pred             HcCCC--------------------------------------------------CCCCCCCHHHHHHHHHHhhcCHHhC
Confidence            32111                                                  1113457788999999999999999


Q ss_pred             CCH----HHHhCCccccCC
Q 015867          383 LTA----RQALNHPFFRNL  397 (399)
Q Consensus       383 ~t~----~ell~hp~f~~~  397 (399)
                      |++    .++++||||..+
T Consensus       239 ~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         239 LGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             CCCCCCHHHHHcCCCcCCC
Confidence            987    699999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=4e-45  Score=337.35  Aligned_cols=249  Identities=24%  Similarity=0.399  Sum_probs=199.7

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      ||+|+||+||++.+..+++.||+|.+.....    ....+..|+++++.+.      |++|+.+.+++......|+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~~~lv~e~   74 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVH------SRFIVSLAYAFQTKTDLCLVMTI   74 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCC------CCcEeeeeEEEcCCCeEEEEEeC
Confidence            7999999999999999999999999864321    1234456777887774      58999999999999999999999


Q ss_pred             C-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          150 L-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       150 ~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      + +++|.+++...  ....+++..+..++.||+.||.|||++||+||||||+||++                        
T Consensus        75 ~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili------------------------  130 (280)
T cd05608          75 MNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL------------------------  130 (280)
T ss_pred             CCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE------------------------
Confidence            9 99999887542  22358999999999999999999999999999999999999                        


Q ss_pred             CCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      +.++.++|+|||++......   .....||+.|+|||++.+..++.++|+|||||++|+|++|+.||...........+.
T Consensus       131 ~~~~~~~l~dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~  210 (280)
T cd05608         131 DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK  210 (280)
T ss_pred             CCCCCEEEeeCccceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHH
Confidence            34667999999988653222   234578999999999999999999999999999999999999997654322211111


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....                                              .....++.++.++.+|+.+||+.||.+||
T Consensus       211 ~~~~~----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~P~~R~  244 (280)
T cd05608         211 QRILN----------------------------------------------DSVTYPDKFSPASKSFCEALLAKDPEKRL  244 (280)
T ss_pred             Hhhcc----------------------------------------------cCCCCcccCCHHHHHHHHHHhcCCHHHhc
Confidence            11000                                              00011235678899999999999999999


Q ss_pred             -----CHHHHhCCccccCCC
Q 015867          384 -----TARQALNHPFFRNLN  398 (399)
Q Consensus       384 -----t~~ell~hp~f~~~~  398 (399)
                           |++++++||||++++
T Consensus       245 ~~~~~~~~~~l~h~~~~~~~  264 (280)
T cd05608         245 GFRDGNCDGLRTHPLFRDLN  264 (280)
T ss_pred             CCCCCCHHHHhcChhhhcCC
Confidence                 889999999999863

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-46  Score=339.05  Aligned_cols=253  Identities=25%  Similarity=0.437  Sum_probs=223.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ..+|.++..||+|+||.|.+|..+.+.+.||||++++..    ..-...+.|.++|....     ..|.+++++..|+.-
T Consensus       348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~-----kppFL~qlHScFQTm  422 (683)
T KOG0696|consen  348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPG-----KPPFLVQLHSCFQTM  422 (683)
T ss_pred             ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCC-----CCchHHHHHHHhhhh
Confidence            457999999999999999999999999999999997632    12233455777766543     357999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+|+||||+ ||+|.-.|++-+  .+.+..+..|+.+|+.||-|||++||++||||.+|||+                 
T Consensus       423 DRLyFVMEyvnGGDLMyhiQQ~G--kFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmL-----------------  483 (683)
T KOG0696|consen  423 DRLYFVMEYVNGGDLMYHIQQVG--KFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVML-----------------  483 (683)
T ss_pred             hheeeEEEEecCchhhhHHHHhc--ccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEe-----------------
Confidence            9999999999 999999998877  69999999999999999999999999999999999998                 


Q ss_pred             CCCcccCCCCCceEEeecCCccc---CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAF---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             +.++++||+|||++..   .+..+.++||||.|+|||++..++|+.++|+||+||+||||+.|++||++.++.
T Consensus       484 -------d~eGHiKi~DFGmcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~  556 (683)
T KOG0696|consen  484 -------DSEGHIKIADFGMCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED  556 (683)
T ss_pred             -------ccCCceEeeecccccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHH
Confidence                   5678899999999864   455667899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +..+.|.+....+|.+                                                  +|.++.+++..+|.
T Consensus       557 elF~aI~ehnvsyPKs--------------------------------------------------lSkEAv~ickg~lt  586 (683)
T KOG0696|consen  557 ELFQAIMEHNVSYPKS--------------------------------------------------LSKEAVAICKGLLT  586 (683)
T ss_pred             HHHHHHHHccCcCccc--------------------------------------------------ccHHHHHHHHHHhh
Confidence            9999998877666654                                                  47778899999999


Q ss_pred             cCCCCCCCH-----HHHhCCccccCCC
Q 015867          377 YDPSERLTA-----RQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t~-----~ell~hp~f~~~~  398 (399)
                      ..|.+|+..     .++-.||||..|+
T Consensus       587 K~P~kRLGcg~~ge~di~~H~FFR~iD  613 (683)
T KOG0696|consen  587 KHPGKRLGCGPEGERDIREHPFFRRID  613 (683)
T ss_pred             cCCccccCCCCccccchhhCcchhhcc
Confidence            999999964     5899999999875

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-46  Score=326.26  Aligned_cols=256  Identities=27%  Similarity=0.469  Sum_probs=214.4

Q ss_pred             EEEE-eeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           68 YKIL-SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        68 y~~~-~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      |++. +.||+|+|+.|--|....+|+.||||++.+.. ..+....+|++++...+     +|+||+++++||+++..+||
T Consensus        79 YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cq-----gh~nilqLiefFEdd~~FYL  153 (463)
T KOG0607|consen   79 YKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQ-----GHKNILQLIEFFEDDTRFYL  153 (463)
T ss_pred             HHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhc-----CCccHHHHHHHhcccceEEE
Confidence            5544 57999999999999999999999999997654 34667888999988876     68999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      |||-| ||+|.+.|.+++  .|++..+..+.++|+.||.|||.+||.||||||+|||-.+.                   
T Consensus       154 VfEKm~GGplLshI~~~~--~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~p-------------------  212 (463)
T KOG0607|consen  154 VFEKMRGGPLLSHIQKRK--HFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESP-------------------  212 (463)
T ss_pred             EEecccCchHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCC-------------------
Confidence            99999 999999999887  59999999999999999999999999999999999998543                   


Q ss_pred             cCCCCCceEEeecCCccc----------CCCCCcccccCCCccchhhhh---C--CCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          225 CLPKSSAIKLIDFGSTAF----------DNQNHSSIVSTRHYRAPEVIL---G--LGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~----------~~~~~~~~~gt~~y~aPE~~~---~--~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                        +.-.-+|||||.+..-          ......+.+|+..|||||+..   +  .-|+.++|.||||||+|-||.|.+|
T Consensus       213 --n~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpP  290 (463)
T KOG0607|consen  213 --NKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPP  290 (463)
T ss_pred             --CCcCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCC
Confidence              3455699999987532          111224568999999999874   2  3589999999999999999999999


Q ss_pred             CCCCC---------------cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          290 FQTHE---------------NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       290 f~~~~---------------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      |.+.-               .......|+++...+|+.-                                         
T Consensus       291 FvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkd-----------------------------------------  329 (463)
T KOG0607|consen  291 FVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKD-----------------------------------------  329 (463)
T ss_pred             ccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhh-----------------------------------------
Confidence            97632               2334555665555555433                                         


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                           +..+|.+..|+|+.+|..|+.+|.++.++++|||++.+
T Consensus       330 -----WahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~  367 (463)
T KOG0607|consen  330 -----WAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRC  367 (463)
T ss_pred             -----hHHhhHHHHHHHHHHHhccHHhhhhhhhccCCcccccc
Confidence                 23568889999999999999999999999999999875

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.3e-45  Score=344.48  Aligned_cols=256  Identities=25%  Similarity=0.420  Sum_probs=204.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||++++..+++.||+|++.+...    ....+..|..++..+      .|++|+.+++.+.+.+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~~   74 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNG------DRRWITNLHYAFQDEN   74 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhC------CCCCCCceEEEEecCC
Confidence            469999999999999999999999999999999975321    223355566666655      4689999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||+ +++|.+++.+... .+++..++.++.||+.||+|||++||+||||||+|||+                  
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill------------------  135 (331)
T cd05597          75 NLYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLL------------------  135 (331)
T ss_pred             eEEEEEecCCCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEE------------------
Confidence            999999999 9999999976432 58999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                            +.++.++|+|||++......    ....+||+.|+|||++..     ..++.++|||||||++|+|++|+.||.
T Consensus       136 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~  209 (331)
T cd05597         136 ------DKNGHIRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFY  209 (331)
T ss_pred             ------CCCCCEEEEECCceeecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCC
Confidence                  34677999999987653221    123469999999999973     457889999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+.......                      .+|                       .....++..+++||
T Consensus       210 ~~~~~~~~~~i~~~~~~~----------------------~~~-----------------------~~~~~~~~~~~~li  244 (331)
T cd05597         210 AESLVETYGKIMNHKEHF----------------------QFP-----------------------PDVTDVSEEAKDLI  244 (331)
T ss_pred             CCCHHHHHHHHHcCCCcc----------------------cCC-----------------------CccCCCCHHHHHHH
Confidence            877666555443211100                      000                       01123677889999


Q ss_pred             HHccccCCCC--CCCHHHHhCCccccCC
Q 015867          372 HGLLRYDPSE--RLTARQALNHPFFRNL  397 (399)
Q Consensus       372 ~~~L~~dP~~--R~t~~ell~hp~f~~~  397 (399)
                      .+||..++.+  |+++.++++||||+++
T Consensus       245 ~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         245 RRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             HHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            9998754443  7899999999999875

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=4e-45  Score=350.21  Aligned_cols=257  Identities=25%  Similarity=0.432  Sum_probs=207.5

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|..+++.+      +||||+++++.+
T Consensus        39 ~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~------~hp~iv~~~~~~  112 (371)
T cd05622          39 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA------NSPWVVQLFYAF  112 (371)
T ss_pred             CcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhC------CCCCCCeEEEEE
Confidence            334578999999999999999999999999999999986422    1123345566666665      469999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      .+++..|+||||+ +++|.+++....   +++..+..++.||+.||+|||++||+||||||+|||+              
T Consensus       113 ~~~~~~~lv~Ey~~gg~L~~~~~~~~---~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll--------------  175 (371)
T cd05622         113 QDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL--------------  175 (371)
T ss_pred             EcCCEEEEEEcCCCCCcHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEE--------------
Confidence            9999999999999 999999997643   8999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCC----CCCcchhHHHHHHHHHHHhCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~ell~g~~  288 (399)
                                +.++.+||+|||++......    ....+||+.|+|||++.+..    ++.++|||||||++|+|++|..
T Consensus       176 ----------~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~  245 (371)
T cd05622         176 ----------DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT  245 (371)
T ss_pred             ----------CCCCCEEEEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCC
Confidence                      34677999999998654321    23567999999999997643    7899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||.+.+.......|......                      ..+|.                        ...++..+.
T Consensus       246 Pf~~~~~~~~~~~i~~~~~~----------------------~~~~~------------------------~~~~s~~~~  279 (371)
T cd05622         246 PFYADSLVGTYSKIMNHKNS----------------------LTFPD------------------------DNDISKEAK  279 (371)
T ss_pred             CCCCCCHHHHHHHHHcCCCc----------------------ccCCC------------------------cCCCCHHHH
Confidence            99987776665555432111                      11111                        134678889


Q ss_pred             HHHHHccccCCCC--CCCHHHHhCCccccCC
Q 015867          369 DLLHGLLRYDPSE--RLTARQALNHPFFRNL  397 (399)
Q Consensus       369 ~li~~~L~~dP~~--R~t~~ell~hp~f~~~  397 (399)
                      +||.+||..++.+  |++++++++||||++.
T Consensus       280 ~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         280 NLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             HHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            9999999844433  7899999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=6.8e-45  Score=343.97  Aligned_cols=293  Identities=25%  Similarity=0.361  Sum_probs=212.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .++|++.++||+|+||.||++.+..++..+|+|++....  .....+..|+++++.+.      |+||+++++++.+.+.
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~   77 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECN------SPYIVGFYGAFYSDGE   77 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCC------CCcccceeEEEEECCE
Confidence            467999999999999999999999999999999986532  23355777888888875      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .++||||+ +++|.+++...+  .+++..+..++.|++.||.|||+. +|+|+||||+|||++                 
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~-----------------  138 (333)
T cd06650          78 ISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN-----------------  138 (333)
T ss_pred             EEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc-----------------
Confidence            99999999 999999998765  589999999999999999999985 799999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCC-CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDN-QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                             .++.+||+|||++.... .......||..|+|||++.+..++.++|+|||||++|+|++|+.||......+..
T Consensus       139 -------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~  211 (333)
T cd06650         139 -------SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELE  211 (333)
T ss_pred             -------CCCCEEEeeCCcchhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHH
Confidence                   45679999999886532 2234567999999999999989999999999999999999999999876543332


Q ss_pred             HHHHHHhC-CCCHHHHHHhcccccccccCCcccCCC-CCccchHHHHHHHhhhhhhhh--hhccchhhhhHHHHHHHHcc
Q 015867          300 AMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWP-EGAVSRESIKAVKKLDRLKNM--VSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       300 ~~i~~~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L  375 (399)
                      ..+..... ...............        ..+. ...................+.  .......++.++.+||.+||
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  283 (333)
T cd06650         212 LMFGCPVEGDPAESETSPRPRPPG--------RPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCL  283 (333)
T ss_pred             HHhcCcccCCccccccCcccCCcc--------chhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhc
Confidence            22211000 000000000000000        0000 000000000000000000000  01111245778999999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCC
Q 015867          376 RYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +.||.+|||+.|++.||||+..
T Consensus       284 ~~~P~~Rpt~~ell~h~~~~~~  305 (333)
T cd06650         284 IKNPAERADLKQLMVHAFIKRS  305 (333)
T ss_pred             cCCcccCcCHHHHhhCHHHhcC
Confidence            9999999999999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=100.00  E-value=2.9e-46  Score=345.31  Aligned_cols=326  Identities=33%  Similarity=0.609  Sum_probs=265.6

Q ss_pred             CCCCCCCCceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCC
Q 015867           47 RRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG  126 (399)
Q Consensus        47 ~~~~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~  126 (399)
                      ....+.++++.+.+|+.+..+|.+....|+|-|++|..|.+...|..||||+++.+....+.-..|++||+.|.....-+
T Consensus       413 DNWdDaEGYYrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Ed  492 (752)
T KOG0670|consen  413 DNWDDAEGYYRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPED  492 (752)
T ss_pred             cCcccccceEEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchh
Confidence            34567889999999999999999999999999999999999999999999999988888888889999999999877767


Q ss_pred             CcceeeeceeeccCCeEEEEEccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeec
Q 015867          127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKY-CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSS  205 (399)
Q Consensus       127 ~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~  205 (399)
                      --||++++..|...+++|||+|-+..+|.+++++.+. -.+....++.|+.||+.||..|-..||+|.||||+||||.  
T Consensus       493 k~Hclrl~r~F~hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVN--  570 (752)
T KOG0670|consen  493 KFHCLRLFRHFKHKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVN--  570 (752)
T ss_pred             hhHHHHHHHHhhhcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEec--
Confidence            7799999999999999999999999999999988653 3588899999999999999999999999999999999995  


Q ss_pred             ccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 015867          206 EFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  284 (399)
                                           .....+||||||.|.+.+.. .+.+.-+..|.|||++.|.+|+...|+||+||+||||.
T Consensus       571 ---------------------E~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElY  629 (752)
T KOG0670|consen  571 ---------------------ESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELY  629 (752)
T ss_pred             ---------------------cCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEee
Confidence                                 45778999999999875544 34566678999999999999999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCC-Cccc----hHHHHHHHhhhh----hhhh
Q 015867          285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE-GAVS----RESIKAVKKLDR----LKNM  355 (399)
Q Consensus       285 ~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~----~~~~~~~~~~~~----~~~~  355 (399)
                      ||+..|++.++..++.......|++|.-|+..-. ....-|+.....-+.+ +.++    ...+..++....    +...
T Consensus       630 tGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgq-F~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~  708 (752)
T KOG0670|consen  630 TGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQ-FKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAV  708 (752)
T ss_pred             ccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcc-hhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhcc
Confidence            9999999999999999999999999999887642 2222232222211111 1100    001111111000    0000


Q ss_pred             --hhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          356 --VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       356 --~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                        .....+..-.++++|+.+||..||++|+|..++|.||||+.
T Consensus       709 q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~  751 (752)
T KOG0670|consen  709 QRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE  751 (752)
T ss_pred             CCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence              11122345568999999999999999999999999999975

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=4.6e-45  Score=344.35  Aligned_cols=247  Identities=24%  Similarity=0.420  Sum_probs=200.4

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|++..+++.||+|+++....    ....+..|..++..+.     .|++|+.+++++...+.+|+||
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~-----~~~~i~~~~~~~~~~~~~~lv~   75 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQAS-----SNPFLVGLHSCFQTTSRLFLVI   75 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhc-----CCCCEeeEEEEEEeCCEEEEEE
Confidence            469999999999999999999999999975321    2234556777776664     4689999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|..++...+  .+++..++.++.||+.||+|||++||+||||||+|||++                       
T Consensus        76 e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~-----------------------  130 (327)
T cd05617          76 EYVNGGDLMFHMQRQR--KLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD-----------------------  130 (327)
T ss_pred             eCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe-----------------------
Confidence            999 999999987765  599999999999999999999999999999999999994                       


Q ss_pred             CCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc------HH
Q 015867          227 PKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN------LE  297 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~  297 (399)
                       .++.++|+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.....      .+
T Consensus       131 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~  209 (327)
T cd05617         131 -ADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTED  209 (327)
T ss_pred             -CCCCEEEeccccceeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHH
Confidence             4667999999988642   2233456799999999999999999999999999999999999999964221      11


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+...                                                 .....+..++..+.++|.+||+.
T Consensus       210 ~~~~~~~~-------------------------------------------------~~~~~p~~~~~~~~~li~~~L~~  240 (327)
T cd05617         210 YLFQVILE-------------------------------------------------KPIRIPRFLSVKASHVLKGFLNK  240 (327)
T ss_pred             HHHHHHHh-------------------------------------------------CCCCCCCCCCHHHHHHHHHHhcc
Confidence            11111100                                                 00111234567789999999999


Q ss_pred             CCCCCCC------HHHHhCCccccCCC
Q 015867          378 DPSERLT------ARQALNHPFFRNLN  398 (399)
Q Consensus       378 dP~~R~t------~~ell~hp~f~~~~  398 (399)
                      ||.+|++      ++++++||||+.++
T Consensus       241 dP~~R~~~~~~~~~~~i~~h~~f~~~~  267 (327)
T cd05617         241 DPKERLGCQPQTGFSDIKSHTFFRSID  267 (327)
T ss_pred             CHHHcCCCCCCCCHHHHHcCCCCCCCC
Confidence            9999998      57999999999864

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=5.3e-45  Score=337.41  Aligned_cols=256  Identities=26%  Similarity=0.430  Sum_probs=206.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .|++.+.||+|+||.||++.+..+++.||+|.+.....    .......|+.+++.+.      |++++.+++.+.+.+.
T Consensus         1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~   74 (285)
T cd05630           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVN------SRFVVSLAYAYETKDA   74 (285)
T ss_pred             CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCC------CCCeeeeeEEEecCCE
Confidence            37889999999999999999999999999999864321    1234556777777775      5899999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .|+||||+ +++|.+++...+...+++..+..++.|++.||.|||+.||+||||||+||++                   
T Consensus        75 ~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~-------------------  135 (285)
T cd05630          75 LCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILL-------------------  135 (285)
T ss_pred             EEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEE-------------------
Confidence            99999999 8999999976655569999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           +.++.++|+|||++......  .....||..|+|||++.+..++.++|+||||+++|+|++|..||.........
T Consensus       136 -----~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~  210 (285)
T cd05630         136 -----DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR  210 (285)
T ss_pred             -----CCCCCEEEeeccceeecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchH
Confidence                 34667999999987653322  23457899999999999999999999999999999999999999764432111


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......                                              ........++.++.+||.+||+.||
T Consensus       211 ~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p  244 (285)
T cd05630         211 EEVERLVKE----------------------------------------------VQEEYSEKFSPDARSLCKMLLCKDP  244 (285)
T ss_pred             HHHHhhhhh----------------------------------------------hhhhcCccCCHHHHHHHHHHhhcCH
Confidence            111110000                                              0001123467778999999999999


Q ss_pred             CCCCC-----HHHHhCCccccCCC
Q 015867          380 SERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       380 ~~R~t-----~~ell~hp~f~~~~  398 (399)
                      .+|||     ++|+++||||++++
T Consensus       245 ~~R~s~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05630         245 KERLGCQGGGAREVKEHPLFKQIN  268 (285)
T ss_pred             HHccCCCCCchHHHHcChhhhccC
Confidence            99999     99999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.5e-45  Score=347.30  Aligned_cols=276  Identities=24%  Similarity=0.405  Sum_probs=205.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      .+|++++.||+|+||.||+|.+..+++.||+|+....     ....|+.+++.+.      |+||+++++++...+..++
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-----~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~l  134 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-----TTLIEAMLLQNVN------HPSVIRMKDTLVSGAITCM  134 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-----ccHHHHHHHHhCC------CCCCcChhheEEeCCeeEE
Confidence            4699999999999999999999999999999985432     2345788888775      5999999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          146 VFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       146 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||++.++|.+++..... .+++..+..|+.||+.||.|||++|||||||||+|||+                       
T Consensus       135 v~e~~~~~l~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill-----------------------  190 (357)
T PHA03209        135 VLPHYSSDLYTYLTKRSR-PLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFI-----------------------  190 (357)
T ss_pred             EEEccCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE-----------------------
Confidence            999998899998876433 69999999999999999999999999999999999999                       


Q ss_pred             CCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCC-CCCCCCCc-------
Q 015867          226 LPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE-ALFQTHEN-------  295 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~-~Pf~~~~~-------  295 (399)
                       +.++.++|+|||++....  .......||..|+|||++.+..++.++|||||||++|+|+++. .+|.....       
T Consensus       191 -~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~  269 (357)
T PHA03209        191 -NDVDQVCIGDLGAAQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVK  269 (357)
T ss_pred             -CCCCCEEEecCccccccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHH
Confidence             446679999999987532  2234567999999999999999999999999999999999854 44443221       


Q ss_pred             --HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhh----hhhhccchhhhhHHHH
Q 015867          296 --LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK----NMVSLHVDRARSTLTD  369 (399)
Q Consensus       296 --~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~  369 (399)
                        ...+..+....+..|..+                    |..................+    .........++.++.+
T Consensus       270 ~~~~~l~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  329 (357)
T PHA03209        270 SCHSHLLKIISTLKVHPEEF--------------------PRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEF  329 (357)
T ss_pred             HHHHHHHHHHHHhccChhhc--------------------CCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHH
Confidence              122223333333323221                    11000000000000000000    0000111245677889


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+||+.||.+|||+.|+|+||||+++
T Consensus       330 li~~mL~~dP~~Rpta~e~l~hp~f~~~  357 (357)
T PHA03209        330 LVHKMLTFDAAMRPSAEEILNYPMFAQL  357 (357)
T ss_pred             HHHHHHcCCcccCcCHHHHhcCchhccC
Confidence            9999999999999999999999999975

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.9e-46  Score=349.43  Aligned_cols=246  Identities=27%  Similarity=0.464  Sum_probs=198.5

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEecchhh----hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKY----RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      ||+|+||+||+|++..+++.||||++......    ......|..++..+.   ..+||+|+.+++.+...+..|+||||
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~---~~~~p~i~~~~~~~~~~~~~~lv~e~   77 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTL---LDESPFIVGLKFSFQTDSDLYLVTDY   77 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhc---cCCCCcCcceEEEEecCCeEEEEEcC
Confidence            79999999999999999999999998643211    112233444444332   23579999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      + +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||+                        +.
T Consensus        78 ~~~g~L~~~l~~~~--~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili------------------------~~  131 (330)
T cd05586          78 MSGGELFWHLQKEG--RFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILL------------------------DA  131 (330)
T ss_pred             CCCChHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE------------------------CC
Confidence            9 999999998765  59999999999999999999999999999999999999                        34


Q ss_pred             CCceEEeecCCcccCC---CCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHH
Q 015867          229 SSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMER  304 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  304 (399)
                      ++.++|+|||++....   ......+||+.|+|||++.+. .++.++|||||||++|+|++|..||...+..+....+..
T Consensus       132 ~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~  211 (330)
T cd05586         132 TGHIALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAF  211 (330)
T ss_pred             CCCEEEecCCcCcCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHc
Confidence            6679999999876522   223456799999999999765 589999999999999999999999988776555544432


Q ss_pred             HhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC-
Q 015867          305 ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL-  383 (399)
Q Consensus       305 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~-  383 (399)
                      ....+|                                                 ...++.++.+||.+||+.||.+|| 
T Consensus       212 ~~~~~~-------------------------------------------------~~~~~~~~~~li~~~L~~~P~~R~~  242 (330)
T cd05586         212 GKVRFP-------------------------------------------------KNVLSDEGRQFVKGLLNRNPQHRLG  242 (330)
T ss_pred             CCCCCC-------------------------------------------------CccCCHHHHHHHHHHcCCCHHHCCC
Confidence            211111                                                 013567789999999999999998 


Q ss_pred             ---CHHHHhCCccccCC
Q 015867          384 ---TARQALNHPFFRNL  397 (399)
Q Consensus       384 ---t~~ell~hp~f~~~  397 (399)
                         ++.++++||||++.
T Consensus       243 ~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         243 AHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCCCHHHHhcCccccCC
Confidence               79999999999875

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-45  Score=342.83  Aligned_cols=246  Identities=26%  Similarity=0.343  Sum_probs=202.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhh---hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC-
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY---RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN-  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-  141 (399)
                      ....+.+.||+|+||+||++.++.+. .||||++......   ...+..|+.++..++      |||||++++++.... 
T Consensus        41 ~~l~~~~~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~~~~f~~E~~il~~l~------HpNIV~f~G~~~~~~~  113 (362)
T KOG0192|consen   41 DELPIEEVLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDESRKAFRREASLLSRLR------HPNIVQFYGACTSPPG  113 (362)
T ss_pred             HHhhhhhhcccCCceeEEEEEeCCce-eEEEEEecchhcChHHHHHHHHHHHHHHhCC------CCCeeeEEEEEcCCCC
Confidence            34566677999999999999876432 2999999753321   457888999999876      599999999999887 


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g-ivH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      ..++||||+ +|+|.+++.......++...+..++.||+.||+|||+++ ||||||||+|||+                 
T Consensus       114 ~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv-----------------  176 (362)
T KOG0192|consen  114 SLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILV-----------------  176 (362)
T ss_pred             ceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEE-----------------
Confidence            799999999 999999998843347999999999999999999999999 9999999999999                 


Q ss_pred             CCCcccCCCCC-ceEEeecCCcccCC---CCCcccccCCCccchhhhh--CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          220 EMPFRCLPKSS-AIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVIL--GLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       220 ~~~~~~~~~~~-~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                             +.+. ++||+|||++....   ...+...||..|||||++.  ...|+.++||||||+++|||+||..||.+.
T Consensus       177 -------~~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~  249 (362)
T KOG0192|consen  177 -------DLKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDL  249 (362)
T ss_pred             -------cCCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCC
Confidence                   4454 89999999997644   3344478999999999999  569999999999999999999999999988


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      ........+......+                      ..                          +..++..+..||.+
T Consensus       250 ~~~~~~~~v~~~~~Rp----------------------~~--------------------------p~~~~~~l~~l~~~  281 (362)
T KOG0192|consen  250 APVQVASAVVVGGLRP----------------------PI--------------------------PKECPPHLSSLMER  281 (362)
T ss_pred             CHHHHHHHHHhcCCCC----------------------CC--------------------------CccCCHHHHHHHHH
Confidence            8755554443221111                      11                          12367888999999


Q ss_pred             ccccCCCCCCCHHHHhC
Q 015867          374 LLRYDPSERLTARQALN  390 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~  390 (399)
                      ||..||.+||++.+++.
T Consensus       282 CW~~dp~~RP~f~ei~~  298 (362)
T KOG0192|consen  282 CWLVDPSRRPSFLEIVS  298 (362)
T ss_pred             hCCCCCCcCCCHHHHHH
Confidence            99999999999998763

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=1.4e-45  Score=346.57  Aligned_cols=245  Identities=29%  Similarity=0.468  Sum_probs=203.7

Q ss_pred             eeeccccceEEEEEEE---ccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           72 SKMGEGTFGRVLECWD---RQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~---~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      +.||+|+||.||++++   ..+|+.||+|++.....   .......|+++++.+.      |+||+++++++...+..|+
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~l   75 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVN------HPFIVKLHYAFQTEGKLYL   75 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCC------CCCcccEEEEEEcCCEEEE
Confidence            5799999999999876   35789999999975321   2234556777777764      5999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++.+..  .+++..++.++.||+.||+|||++||+||||||+|||+                      
T Consensus        76 v~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~----------------------  131 (318)
T cd05582          76 ILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL----------------------  131 (318)
T ss_pred             EEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEE----------------------
Confidence            99999 899999997765  59999999999999999999999999999999999999                      


Q ss_pred             cCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM  301 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~  301 (399)
                        +.++.++|+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+..+....
T Consensus       132 --~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~  209 (318)
T cd05582         132 --DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTM  209 (318)
T ss_pred             --CCCCcEEEeeccCCcccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHH
Confidence              34667999999988653322   3456799999999999998999999999999999999999999988776665555


Q ss_pred             HHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCC
Q 015867          302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE  381 (399)
Q Consensus       302 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  381 (399)
                      +.......                                                  +..++.++.+||.+||+.||.+
T Consensus       210 i~~~~~~~--------------------------------------------------p~~~~~~~~~li~~~l~~~P~~  239 (318)
T cd05582         210 ILKAKLGM--------------------------------------------------PQFLSPEAQSLLRALFKRNPAN  239 (318)
T ss_pred             HHcCCCCC--------------------------------------------------CCCCCHHHHHHHHHHhhcCHhH
Confidence            43321111                                                  1245677899999999999999


Q ss_pred             CCC-----HHHHhCCccccCCC
Q 015867          382 RLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       382 R~t-----~~ell~hp~f~~~~  398 (399)
                      |||     +.++++||||+.++
T Consensus       240 R~~a~~~~~~~~~~~~~~~~~~  261 (318)
T cd05582         240 RLGAGPDGVEEIKRHPFFSTID  261 (318)
T ss_pred             cCCCCCCCHHHHhCCCCcCCCC
Confidence            999     77899999998753

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>PHA03207 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=9.6e-45  Score=350.33  Aligned_cols=282  Identities=23%  Similarity=0.386  Sum_probs=212.0

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEc--cCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDR--QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ..+..+|++++.||.|+||.||+|...  .+++.||+|.+...    .....|+++++.+.      |+||+++++++..
T Consensus        88 ~~~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----~~~~~E~~il~~l~------h~~iv~~~~~~~~  157 (392)
T PHA03207         88 SVVRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----KTPGREIDILKTIS------HRAIINLIHAYRW  157 (392)
T ss_pred             hhccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----ccHHHHHHHHHhcC------CCCccceeeeEee
Confidence            345568999999999999999999754  45688999988643    33456888888875      5999999999999


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          140 RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       140 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      .+..|+|||+++++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+                 
T Consensus       158 ~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill-----------------  218 (392)
T PHA03207        158 KSTVCMVMPKYKCDLFTYVDRSG--PLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFL-----------------  218 (392)
T ss_pred             CCEEEEEehhcCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEE-----------------
Confidence            99999999999889999996544  69999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                             +.++.++|+|||++......     .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+..
T Consensus       219 -------~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~  291 (392)
T PHA03207        219 -------DEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQ  291 (392)
T ss_pred             -------cCCCCEEEccCccccccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence                   45677999999988653322     234579999999999999999999999999999999999999997644


Q ss_pred             c---HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhh--hhhhhhccchhhhhHHHH
Q 015867          295 N---LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR--LKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       295 ~---~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~  369 (399)
                      .   ...+..+.+..+..+..+........                  ......+.....  ...........++.++.+
T Consensus       292 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  353 (392)
T PHA03207        292 VKSSSSQLRSIIRCMQVHPLEFPQNGSTNL------------------CKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEY  353 (392)
T ss_pred             CCCcHHHHHHHHHHhccCccccCCccchhH------------------HHHHHhhcccccCCccccchhhccCcchhHHH
Confidence            3   34455555544433322110000000                  000000000000  000000011234667899


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+||+.||.+|||+.|+|+||||++.
T Consensus       354 li~~ml~~dp~~Rpsa~e~l~~p~f~~~  381 (392)
T PHA03207        354 LIAKMLTFDQEFRPSAQDILSLPLFTKE  381 (392)
T ss_pred             HHHHHhccChhhCCCHHHHhhCchhhcc
Confidence            9999999999999999999999999874

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=5.7e-46  Score=346.37  Aligned_cols=251  Identities=30%  Similarity=0.514  Sum_probs=224.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEec---chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|..++.+|+|+||.+++++++..++.|++|.+..   ....+.....|+.++..+.      |||||.+.+.|..++.
T Consensus         4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~------hP~iv~y~ds~~~~~~   77 (426)
T KOG0589|consen    4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLL------HPNIVEYKDSFEEDGQ   77 (426)
T ss_pred             chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhcc------CCCeeeeccchhcCCc
Confidence            469999999999999999999999999999999964   3344556778888888876      5999999999998887


Q ss_pred             -EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          143 -ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       143 -~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                       .+|||+|| ||+|.+.|.+.+...|++..+..|+.||+.|+.|||++.|+|||||+.|||++                 
T Consensus        78 ~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt-----------------  140 (426)
T KOG0589|consen   78 LLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT-----------------  140 (426)
T ss_pred             eEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc-----------------
Confidence             99999999 99999999887766899999999999999999999999999999999999984                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                             +++.|+|+|||+|+..+..   ..+.+||+.||+||++.+.+|+.++|||||||++|||++-+++|.+.+...
T Consensus       141 -------k~~~VkLgDfGlaK~l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~  213 (426)
T KOG0589|consen  141 -------KDKKVKLGDFGLAKILNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE  213 (426)
T ss_pred             -------ccCceeecchhhhhhcCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH
Confidence                   5667899999999886554   367899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ...+|.+....+                                                 .+..++.+++.+|..||..
T Consensus       214 Li~ki~~~~~~P-------------------------------------------------lp~~ys~el~~lv~~~l~~  244 (426)
T KOG0589|consen  214 LILKINRGLYSP-------------------------------------------------LPSMYSSELRSLVKSMLRK  244 (426)
T ss_pred             HHHHHhhccCCC-------------------------------------------------CCccccHHHHHHHHHHhhc
Confidence            988887765221                                                 1245788999999999999


Q ss_pred             CCCCCCCHHHHhCCcccc
Q 015867          378 DPSERLTARQALNHPFFR  395 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~  395 (399)
                      ||..||++.+||.+|.+.
T Consensus       245 ~P~~RPsa~~LL~~P~l~  262 (426)
T KOG0589|consen  245 NPEHRPSALELLRRPHLL  262 (426)
T ss_pred             CCccCCCHHHHhhChhhh
Confidence            999999999999998775

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=4.5e-45  Score=344.19  Aligned_cols=244  Identities=28%  Similarity=0.446  Sum_probs=199.2

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchhhh----HHHHHHHH-HHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEID-VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~e~~-~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      +.||+|+||.||+|++..+++.||+|++.......    .....|.. +++.      ..|+||+++++++...+..|+|
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------~~h~~Iv~~~~~~~~~~~~~lv   74 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKN------VKHPFLVGLHFSFQTADKLYFV   74 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHh------CCCCCCCceeEEEEcCCeEEEE
Confidence            46999999999999999999999999997532111    11222222 2222      3579999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+                       
T Consensus        75 ~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili-----------------------  129 (325)
T cd05602          75 LDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL-----------------------  129 (325)
T ss_pred             EeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEE-----------------------
Confidence            9999 999999998765  58899999999999999999999999999999999999                       


Q ss_pred             CCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                       +.++.++|+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+....+
T Consensus       130 -~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  208 (325)
T cd05602         130 -DSQGHIVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNI  208 (325)
T ss_pred             -CCCCCEEEccCCCCcccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence             34667999999988642   22234567999999999999999999999999999999999999999887766655554


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      .....                                                  ...+.++..+.+||.+||+.||.+|
T Consensus       209 ~~~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R  238 (325)
T cd05602         209 LNKPL--------------------------------------------------QLKPNITNSARHLLEGLLQKDRTKR  238 (325)
T ss_pred             HhCCc--------------------------------------------------CCCCCCCHHHHHHHHHHcccCHHHC
Confidence            33211                                                  1113567788999999999999999


Q ss_pred             CCHH----HHhCCccccCC
Q 015867          383 LTAR----QALNHPFFRNL  397 (399)
Q Consensus       383 ~t~~----ell~hp~f~~~  397 (399)
                      +++.    ++++|+||+.+
T Consensus       239 ~~~~~~~~~i~~~~~~~~~  257 (325)
T cd05602         239 LGAKDDFMEIKNHIFFSPI  257 (325)
T ss_pred             CCCCCCHHHHhcCcccCCC
Confidence            9876    89999999765

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=1.9e-44  Score=333.38  Aligned_cols=277  Identities=31%  Similarity=0.514  Sum_probs=217.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|++.+.||+|++|.||+|++..+++.||||+++...   ........|+.+++.+.      |+|++++++++.+++..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~   74 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQ------HPNIVCLQDVLMQESRL   74 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcC------CCCEeeeEEEEeeCCeE
Confidence            4899999999999999999999999999999986432   12345667888888775      59999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKLGPSLFDFLKRNKY-CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||||+.++|.+++..... ..+++..++.++.||+.||.|||++||+|+||||+||+++                   
T Consensus        75 ~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~-------------------  135 (285)
T cd07861          75 YLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID-------------------  135 (285)
T ss_pred             EEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc-------------------
Confidence            99999997799998876432 4689999999999999999999999999999999999994                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           .++.++|+|||++......   .....+++.|+|||++.+. .++.++|+||||+++|+|++|++||.+.+..+.
T Consensus       136 -----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~  210 (285)
T cd07861         136 -----NKGVIKLADFGLARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQ  210 (285)
T ss_pred             -----CCCcEEECcccceeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence                 4667999999987653322   1234578899999998764 578999999999999999999999998888777


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.+..+.+....+..........      ..++               .............++.++.+||.+||+.|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~---------------~~~~~~~~~~~~~~~~~~~~li~~~l~~d  269 (285)
T cd07861         211 LFRIFRILGTPTEDVWPGVTSLPDYK------NTFP---------------KWKKGSLRSAVKNLDEDGLDLLEKMLIYD  269 (285)
T ss_pred             HHHHHHHhCCCChhhhhcchhhHHHH------hhcc---------------ccCcchhHHhcCCCCHHHHHHHHHHhcCC
Confidence            77777766655544433221110000      0000               00111111223457889999999999999


Q ss_pred             CCCCCCHHHHhCCccc
Q 015867          379 PSERLTARQALNHPFF  394 (399)
Q Consensus       379 P~~R~t~~ell~hp~f  394 (399)
                      |.+|||+.++++||||
T Consensus       270 P~~Rpt~~~ll~~~~~  285 (285)
T cd07861         270 PAKRISAKKALNHPYF  285 (285)
T ss_pred             hhhCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=3.1e-45  Score=345.26  Aligned_cols=244  Identities=28%  Similarity=0.432  Sum_probs=199.0

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHH-HHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDV-LQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~-l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      +.||+|+||+||+|.+..+|+.||+|++.....    .......|..+ ++.      ..|+||+++++.+...+..|+|
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------~~hp~iv~~~~~~~~~~~~~lv   74 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKN------VKHPFLVGLHYSFQTTEKLYFV   74 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHh------CCCCCCccEEEEEecCCEEEEE
Confidence            469999999999999999999999999975321    11222333322 222      3579999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|..++....  .+++..+..++.||+.||+|||++||+||||||+|||+                       
T Consensus        75 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll-----------------------  129 (325)
T cd05604          75 LDFVNGGELFFHLQRER--SFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILL-----------------------  129 (325)
T ss_pred             EcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEE-----------------------
Confidence            9999 999999887765  69999999999999999999999999999999999999                       


Q ss_pred             CCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                       +.++.++|+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+....+
T Consensus       130 -~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~  208 (325)
T cd05604         130 -DSQGHVVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNI  208 (325)
T ss_pred             -CCCCCEEEeecCCcccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHH
Confidence             45677999999987642   22234567999999999999999999999999999999999999999887765554444


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      .....                                                  ...+..+..+.++|.+||+.||.+|
T Consensus       209 ~~~~~--------------------------------------------------~~~~~~~~~~~~ll~~ll~~~p~~R  238 (325)
T cd05604         209 LHKPL--------------------------------------------------VLRPGASLTAWSILEELLEKDRQRR  238 (325)
T ss_pred             HcCCc--------------------------------------------------cCCCCCCHHHHHHHHHHhccCHHhc
Confidence            32110                                                  1113456778899999999999999


Q ss_pred             CCH----HHHhCCccccCC
Q 015867          383 LTA----RQALNHPFFRNL  397 (399)
Q Consensus       383 ~t~----~ell~hp~f~~~  397 (399)
                      |++    .++++||||+.+
T Consensus       239 ~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         239 LGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             CCCCCCHHHHhcCCCcCCC
Confidence            976    589999999875

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=100.00  E-value=2.3e-44  Score=332.73  Aligned_cols=276  Identities=32%  Similarity=0.487  Sum_probs=215.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|++.+.||+|+||.||+|.+..+|+.||+|.++...   .....+..|+++++.+.      |+|++++++++.+.+..
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~~~~~~   74 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK------HKNIVRLYDVLHSDKKL   74 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcC------CCCeeeHHHHhccCCce
Confidence            5899999999999999999999999999999986432   12234566888888775      58999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++|+||++++|.+++.+... .+++..+..++.||+.||.|||++||+|+||||+||+++                    
T Consensus        75 ~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~--------------------  133 (284)
T cd07839          75 TLVFEYCDQDLKKYFDSCNG-DIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN--------------------  133 (284)
T ss_pred             EEEEecCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc--------------------
Confidence            99999998899988876432 589999999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCC-CCCCcHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALF-QTHENLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf-~~~~~~~~  298 (399)
                          .++.++|+|||++......   .....++..|+|||++.+. .++.++|||||||++|+|++|..|| .+.+..+.
T Consensus       134 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~  209 (284)
T cd07839         134 ----KNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ  209 (284)
T ss_pred             ----CCCcEEECccchhhccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHH
Confidence                4667999999987653322   2334678999999998775 4799999999999999999988774 55666667


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +..+.+..+..+...+...........    ...++..                 .......+.++.++.+||.+||+.|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-----------------~~~~~~~~~~~~~~~~li~~~l~~~  268 (284)
T cd07839         210 LKRIFRLLGTPTEESWPGVSKLPDYKP----YPMYPAT-----------------TSLVNVVPKLNSTGRDLLQNLLVCN  268 (284)
T ss_pred             HHHHHHHhCCCChHHhHHhhhcccccc----cCCCCCc-----------------chhhhhcccCCHHHHHHHHHHhcCC
Confidence            777777766666554443322111100    0000000                 0001223457889999999999999


Q ss_pred             CCCCCCHHHHhCCccc
Q 015867          379 PSERLTARQALNHPFF  394 (399)
Q Consensus       379 P~~R~t~~ell~hp~f  394 (399)
                      |.+|||++++++||||
T Consensus       269 P~~R~t~~~il~h~~f  284 (284)
T cd07839         269 PVQRISAEEALQHPYF  284 (284)
T ss_pred             hhhcCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=1.1e-44  Score=342.44  Aligned_cols=257  Identities=24%  Similarity=0.416  Sum_probs=204.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||++++..+++.||+|++.+...    ....+..|..++..+      .|++|+.+++.+.+.+
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~~~~   74 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNG------DNQWITTLHYAFQDEN   74 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhC------CCCCEeeEEEEEecCC
Confidence            369999999999999999999999999999999864221    122344555555544      5699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||+ +++|.+++.+... .+++..++.++.||+.||+|||++||+||||||+|||+                  
T Consensus        75 ~~~lv~ey~~~g~L~~~l~~~~~-~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili------------------  135 (332)
T cd05623          75 NLYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM------------------  135 (332)
T ss_pred             EEEEEEeccCCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEE------------------
Confidence            999999999 9999999987432 58999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                            +.++.++|+|||++......    ....+||+.|+|||++.     ...++.++|||||||++|+|++|+.||.
T Consensus       136 ------~~~~~~kL~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~  209 (332)
T cd05623         136 ------DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFY  209 (332)
T ss_pred             ------CCCCCEEEeecchheecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCC
Confidence                  44677999999987643221    12357999999999986     3468899999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+......                      ..+|.                       ....++.++.+||
T Consensus       210 ~~~~~~~~~~i~~~~~~----------------------~~~p~-----------------------~~~~~s~~~~~li  244 (332)
T cd05623         210 AESLVETYGKIMNHKER----------------------FQFPA-----------------------QVTDVSEDAKDLI  244 (332)
T ss_pred             CCCHHHHHHHHhCCCcc----------------------ccCCC-----------------------ccccCCHHHHHHH
Confidence            87776666555322110                      01111                       1134678889999


Q ss_pred             HHccccCCCC--CCCHHHHhCCccccCCC
Q 015867          372 HGLLRYDPSE--RLTARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~--R~t~~ell~hp~f~~~~  398 (399)
                      .+||..++.+  |+++.|+++||||++++
T Consensus       245 ~~ll~~~~~r~~r~~~~~~~~h~~f~~~~  273 (332)
T cd05623         245 RRLICSREHRLGQNGIEDFKQHPFFTGID  273 (332)
T ss_pred             HHHccChhhhcCCCCHHHHhCCCCcCCCC
Confidence            9999765544  78999999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=100.00  E-value=3.1e-44  Score=342.32  Aligned_cols=300  Identities=26%  Similarity=0.457  Sum_probs=228.9

Q ss_pred             eeeccCC---ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcc
Q 015867           56 YVFNLGE---NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH  129 (399)
Q Consensus        56 ~~~~~~~---~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~  129 (399)
                      +++..+.   .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+..|+.+++.+.      |+|
T Consensus         3 ~~~~~~~~~~~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~   76 (353)
T cd07850           3 YSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVN------HKN   76 (353)
T ss_pred             eeecccchhhhhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcC------CCC
Confidence            4455555   4578899999999999999999999999999999998542   122334556777777765      599


Q ss_pred             eeeeceeeccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 015867          130 CVQIRNWFDYR------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLV  203 (399)
Q Consensus       130 iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~  203 (399)
                      ++++++++...      ...|+||||++++|.+.+...    ++...+..++.||+.||+|||++||+||||||+||++ 
T Consensus        77 iv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~----l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~-  151 (353)
T cd07850          77 IIGLLNVFTPQKSLEEFQDVYLVMELMDANLCQVIQMD----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV-  151 (353)
T ss_pred             CcceeeeeccCCCccccCcEEEEEeccCCCHHHHHhhc----CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEE-
Confidence            99999887643      357999999988999888642    8899999999999999999999999999999999999 


Q ss_pred             ecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC--cccccCCCccchhhhhCCCCCCcchhHHHHHHHH
Q 015867          204 SSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILV  281 (399)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  281 (399)
                                             +.++.++|+|||++.......  ....|+..|+|||++.+..++.++|||||||++|
T Consensus       152 -----------------------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~  208 (353)
T cd07850         152 -----------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG  208 (353)
T ss_pred             -----------------------CCCCCEEEccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHH
Confidence                                   446779999999987644322  3456899999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccch
Q 015867          282 ELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD  361 (399)
Q Consensus       282 ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (399)
                      +|++|+.||...+..+....+....+.++..+..........+..........       ....................
T Consensus       209 ~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~  281 (353)
T cd07850         209 EMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGY-------SFEELFPDVLFPPDSESHNK  281 (353)
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCc-------chhhhCcccccCcccccccc
Confidence            99999999999888888888888888888877666544333332221110000       00000000000000011123


Q ss_pred             hhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       362 ~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ..+..+++||.+||+.||.+|||+.|+|+||||+.
T Consensus       282 ~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         282 LKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             cchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence            45677899999999999999999999999999864

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=1.1e-44  Score=342.45  Aligned_cols=257  Identities=24%  Similarity=0.418  Sum_probs=205.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||++++..+++.||+|++.....    ....+..|..++..+      .|++|+.+++.+.+.+
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~l~~~~~~~~   74 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNG------DCQWITTLHYAFQDEN   74 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhC------CCCCEeeEEEEEEcCC
Confidence            469999999999999999999999999999999865321    122344556665554      4699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||+ |++|.+++.+... .+++..+..++.|++.||+|||++||+||||||+|||+                  
T Consensus        75 ~~~lv~Ey~~gg~L~~~l~~~~~-~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill------------------  135 (331)
T cd05624          75 YLYLVMDYYVGGDLLTLLSKFED-RLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLL------------------  135 (331)
T ss_pred             EEEEEEeCCCCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEE------------------
Confidence            999999999 9999999987432 58999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                            +.++.+||+|||++......    .....||+.|+|||++.+     ..++.++|||||||++|+|++|+.||.
T Consensus       136 ------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~  209 (331)
T cd05624         136 ------DMNGHIRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFY  209 (331)
T ss_pred             ------cCCCCEEEEeccceeeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCcc
Confidence                  34667999999988654322    123579999999999876     468899999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+......                      ..+|.                       ....++.++.+||
T Consensus       210 ~~~~~~~~~~i~~~~~~----------------------~~~p~-----------------------~~~~~~~~~~~li  244 (331)
T cd05624         210 AESLVETYGKIMNHEER----------------------FQFPS-----------------------HITDVSEEAKDLI  244 (331)
T ss_pred             CCCHHHHHHHHHcCCCc----------------------ccCCC-----------------------ccccCCHHHHHHH
Confidence            87766655554321110                      11111                       1124577889999


Q ss_pred             HHccccCCCC--CCCHHHHhCCccccCCC
Q 015867          372 HGLLRYDPSE--RLTARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~--R~t~~ell~hp~f~~~~  398 (399)
                      .+||..++.+  |++++++++||||++++
T Consensus       245 ~~ll~~~~~~~~~~~~~~~~~h~~f~~~~  273 (331)
T cd05624         245 QRLICSRERRLGQNGIEDFKKHAFFEGID  273 (331)
T ss_pred             HHHccCchhhcCCCCHHHHhcCCCcCCCC
Confidence            9999876654  56999999999998763

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=2.3e-45  Score=297.20  Aligned_cols=279  Identities=32%  Similarity=0.517  Sum_probs=232.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|..+++||+|.||+||++++..+++.||+|.++...   .......+|+-+++++.|      .|||++++....+..+
T Consensus         3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkh------knivrl~dvlhsdkkl   76 (292)
T KOG0662|consen    3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH------KNIVRLHDVLHSDKKL   76 (292)
T ss_pred             chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhh------cceeehhhhhccCcee
Confidence            4778899999999999999999999999999997532   334567789999999975      8999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      -+|+|||..+|..+..+-.. .++...++.++.|++.||.|+|++++.|||+||.|+||                     
T Consensus        77 tlvfe~cdqdlkkyfdslng-~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnlli---------------------  134 (292)
T KOG0662|consen   77 TLVFEFCDQDLKKYFDSLNG-DLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLI---------------------  134 (292)
T ss_pred             EEeHHHhhHHHHHHHHhcCC-cCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEe---------------------
Confidence            99999999899998876443 59999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~  298 (399)
                         +.++.+||+|||+++..+...   +..+-|.+|++|.++.+. -|++..|+||.|||+.|+.. |++.|.+.+..++
T Consensus       135 ---n~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddq  211 (292)
T KOG0662|consen  135 ---NRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ  211 (292)
T ss_pred             ---ccCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHH
Confidence               568889999999987655433   344679999999999987 58999999999999999997 9999999999999


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +.+|+...+.+.+..|+....-.++..    -..+|....                 .+...++.+..-+||+.++|..|
T Consensus       212 lkrif~~lg~p~ed~wps~t~lpdyk~----yp~ypatts-----------------wsqivp~lns~grdllqkll~cn  270 (292)
T KOG0662|consen  212 LKRIFRLLGTPTEDQWPSMTKLPDYKP----YPIYPATTS-----------------WSQIVPKLNSTGRDLLQKLLKCN  270 (292)
T ss_pred             HHHHHHHhCCCccccCCccccCCCCcc----cCCccccch-----------------HHHHhhhhcchhHHHHHHHhccC
Confidence            999999999988876655543332211    011121110                 01122455666789999999999


Q ss_pred             CCCCCCHHHHhCCccccCC
Q 015867          379 PSERLTARQALNHPFFRNL  397 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~  397 (399)
                      |.+|++++++++||||.+.
T Consensus       271 p~qrisaeaalqhpyf~d~  289 (292)
T KOG0662|consen  271 PAQRISAEAALQHPYFSDF  289 (292)
T ss_pred             cccccCHHHHhcCcccccc
Confidence            9999999999999999875

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=1.1e-44  Score=330.01  Aligned_cols=252  Identities=35%  Similarity=0.624  Sum_probs=207.3

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHH---HHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA---MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~---~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      |++.+.||+|+||+||++.+..+++.||+|++..........   ..|+.+++.+.      |+||+++++++.+....+
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~------~~~i~~~~~~~~~~~~~~   74 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLR------HPNIVQILDVFQDDNYLY   74 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHT------BTTBCHEEEEEEESSEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccc------cccccccccccccccccc
Confidence            899999999999999999999999999999998754433332   34788888885      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +|||++ +++|.+++....  .++...+..++.||+.||.+||+.||+|+||||+||++                     
T Consensus        75 ~v~~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~---------------------  131 (260)
T PF00069_consen   75 IVMEYCPGGSLQDYLQKNK--PLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILL---------------------  131 (260)
T ss_dssp             EEEEEETTEBHHHHHHHHS--SBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEE---------------------
T ss_pred             ccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccc---------------------
Confidence            999999 669999998544  59999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCccc---CCCCCcccccCCCccchhhhh-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAF---DNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                         +.++.++|+|||.+..   .........+|..|+|||++. +..++.++|+||||+++|+|++|..||...+..+..
T Consensus       132 ---~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~  208 (260)
T PF00069_consen  132 ---DENGEVKLIDFGSSVKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQL  208 (260)
T ss_dssp             ---STTSEEEESSGTTTEESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHH
T ss_pred             ---ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhh
Confidence               4577889999999864   233345567899999999998 788999999999999999999999999987444444


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+..........                                           ........+..+.++|.+||+.||
T Consensus       209 ~~~~~~~~~~~~~-------------------------------------------~~~~~~~~~~~l~~li~~~l~~~p  245 (260)
T PF00069_consen  209 EIIEKILKRPLPS-------------------------------------------SSQQSREKSEELRDLIKKMLSKDP  245 (260)
T ss_dssp             HHHHHHHHTHHHH-------------------------------------------HTTSHTTSHHHHHHHHHHHSSSSG
T ss_pred             hhhhhcccccccc-------------------------------------------cccccchhHHHHHHHHHHHccCCh
Confidence            4443332111000                                           000011123778999999999999


Q ss_pred             CCCCCHHHHhCCccc
Q 015867          380 SERLTARQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~~ell~hp~f  394 (399)
                      .+|||+.++++||||
T Consensus       246 ~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  246 EQRPSAEELLKHPWF  260 (260)
T ss_dssp             GGSTTHHHHHTSGGG
T ss_pred             hHCcCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=2.2e-44  Score=331.84  Aligned_cols=250  Identities=24%  Similarity=0.409  Sum_probs=199.6

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      ||+|+||.||++.+..+|+.||+|.+.....    .......|.++++.+.      |+||+++++.+......|+||||
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~i~~~~~~~~~~~~~~lv~e~   74 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVN------SPFIVNLAYAFESKTHLCLVMSL   74 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcC------CCcEEEEEEEEecCCeEEEEEec
Confidence            7999999999999999999999999864221    1233445778887775      59999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      + |++|.+++.......+++..+..++.||+.||+|||+.||+||||||+||+++                        .
T Consensus        75 ~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~------------------------~  130 (277)
T cd05607          75 MNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD------------------------D  130 (277)
T ss_pred             CCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc------------------------C
Confidence            9 99999988776655689999999999999999999999999999999999993                        4


Q ss_pred             CCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Q 015867          229 SSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL  306 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~  306 (399)
                      ++.++|+|||++......  .....||..|+|||++.+..++.++|+|||||++|+|++|..||...........+....
T Consensus       131 ~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~  210 (277)
T cd05607         131 QGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRT  210 (277)
T ss_pred             CCCEEEeeceeeeecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHh
Confidence            667999999987654332  234568999999999999899999999999999999999999997643321111111110


Q ss_pred             CCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCH-
Q 015867          307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA-  385 (399)
Q Consensus       307 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-  385 (399)
                      ..                                             .........++.++.+||.+||+.||.+|||+ 
T Consensus       211 ~~---------------------------------------------~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~  245 (277)
T cd05607         211 LE---------------------------------------------DEVKFEHQNFTEESKDICRLFLAKKPEDRLGSR  245 (277)
T ss_pred             hc---------------------------------------------cccccccccCCHHHHHHHHHHhccCHhhCCCCc
Confidence            00                                             00000112467788999999999999999999 


Q ss_pred             ---HHHhCCccccCCC
Q 015867          386 ---RQALNHPFFRNLN  398 (399)
Q Consensus       386 ---~ell~hp~f~~~~  398 (399)
                         ++++.||||+.++
T Consensus       246 ~~~~~~~~h~~f~~~~  261 (277)
T cd05607         246 EKNDDPRKHEFFKTIN  261 (277)
T ss_pred             cchhhhhcChhhcCCC
Confidence               6788999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=9.1e-45  Score=341.56  Aligned_cols=244  Identities=27%  Similarity=0.416  Sum_probs=197.5

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchhh----hHHHHHHHH-HHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY----RDAAMIEID-VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~-~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      +.||+|+||.||+|++..+++.||+|++......    ...+..|.. +++.      ..|+||+++++.+.+.+..|+|
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~------~~h~~iv~~~~~~~~~~~~~lv   74 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKN------LKHPFLVGLHYSFQTAEKLYFV   74 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHh------CCCCCccceeeEEEcCCEEEEE
Confidence            4699999999999999999999999998753221    122222322 2333      3579999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|...+....  .+++..+..++.||+.||.|||++||+||||||+|||+                       
T Consensus        75 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll-----------------------  129 (321)
T cd05603          75 LDYVNGGELFFHLQRER--CFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILL-----------------------  129 (321)
T ss_pred             EcCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEE-----------------------
Confidence            9999 899999887655  58999999999999999999999999999999999999                       


Q ss_pred             CCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                       +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||...+.......+
T Consensus       130 -~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  208 (321)
T cd05603         130 -DSQGHVVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNI  208 (321)
T ss_pred             -CCCCCEEEccCCCCccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHH
Confidence             45677999999987642   12234567999999999999999999999999999999999999999887655544443


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      .....                                                  ..++..+..+.++|.+||+.||.+|
T Consensus       209 ~~~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~~R  238 (321)
T cd05603         209 LHKPL--------------------------------------------------QLPGGKTVAACDLLVGLLHKDQRRR  238 (321)
T ss_pred             hcCCC--------------------------------------------------CCCCCCCHHHHHHHHHHccCCHhhc
Confidence            22111                                                  1113456778999999999999999


Q ss_pred             CCH----HHHhCCccccCC
Q 015867          383 LTA----RQALNHPFFRNL  397 (399)
Q Consensus       383 ~t~----~ell~hp~f~~~  397 (399)
                      +++    .++++||||..+
T Consensus       239 ~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         239 LGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             CCCCCCHHHHhCCCCcCCC
Confidence            975    599999999865

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=4.7e-44  Score=331.06  Aligned_cols=256  Identities=25%  Similarity=0.402  Sum_probs=209.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .|+..+.||+|+||+||++.+..+++.||+|.+.....    ....+..|+++++.+.      |++++.+.+.+..++.
T Consensus         1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~------~~~i~~~~~~~~~~~~   74 (285)
T cd05632           1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVN------SQFVVNLAYAYETKDA   74 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcC------CcCceeEEEEEecCCE
Confidence            37889999999999999999999999999999865321    1233566888888775      4899999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|.+++...+...+++..+..++.|++.||.|||++||+||||||+||+++                  
T Consensus        75 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~------------------  136 (285)
T cd05632          75 LCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD------------------  136 (285)
T ss_pred             EEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC------------------
Confidence            99999999 89999988766555699999999999999999999999999999999999993                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                            .++.++|+|||++.....  ......|+..|+|||++.+..++.++|+||||+++|+|++|..||.........
T Consensus       137 ------~~~~~kl~Dfg~~~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~  210 (285)
T cd05632         137 ------DYGHIRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKR  210 (285)
T ss_pred             ------CCCCEEEecCCcceecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                  456799999998755322  223457899999999999889999999999999999999999999876654443


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+........                                              ......++.++.+|+.+||+.||
T Consensus       211 ~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~l~~~P  244 (285)
T cd05632         211 EEVDRRVLETE----------------------------------------------EVYSAKFSEEAKSICKMLLTKDP  244 (285)
T ss_pred             HHHHHhhhccc----------------------------------------------cccCccCCHHHHHHHHHHccCCH
Confidence            33322111000                                              01123456778999999999999


Q ss_pred             CCCCC-----HHHHhCCccccCCC
Q 015867          380 SERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       380 ~~R~t-----~~ell~hp~f~~~~  398 (399)
                      .+|||     +.++++||||++..
T Consensus       245 ~~R~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05632         245 KQRLGCQEEGAGEVKRHPFFRNMN  268 (285)
T ss_pred             hHcCCCcccChHHHHcChhhhcCC
Confidence            99999     89999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=100.00  E-value=7.1e-44  Score=330.67  Aligned_cols=251  Identities=26%  Similarity=0.487  Sum_probs=212.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||++.+..+++.||+|++....    .....+..|+++++.+.      |+||+++++++.+.+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~   74 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIR------HPFLVNLYGSFQDDS   74 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCC------CCCccceeeEEEcCC
Confidence            36999999999999999999999999999999986532    22344666777777774      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ +++|.+++....  .+++..+..++.||+.||.|||+.||+|+||+|+|||++                 
T Consensus        75 ~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~-----------------  135 (290)
T cd05580          75 NLYLVMEYVPGGELFSHLRKSG--RFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD-----------------  135 (290)
T ss_pred             eEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC-----------------
Confidence            999999999 999999998775  699999999999999999999999999999999999993                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                             .++.++|+|||++...........|++.|+|||.+.+..++.++|+||||+++|+|++|..||...+......
T Consensus       136 -------~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~  208 (290)
T cd05580         136 -------SDGYIKITDFGFAKRVKGRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYE  208 (290)
T ss_pred             -------CCCCEEEeeCCCccccCCCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                   4667999999998776555556679999999999988889999999999999999999999998776544444


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+......+                                                  +..++..+.++|.+||..||.
T Consensus       209 ~~~~~~~~~--------------------------------------------------~~~~~~~l~~li~~~l~~~p~  238 (290)
T cd05580         209 KILEGKVRF--------------------------------------------------PSFFSPDAKDLIRNLLQVDLT  238 (290)
T ss_pred             HHhcCCccC--------------------------------------------------CccCCHHHHHHHHHHccCCHH
Confidence            443221111                                                  123467789999999999999


Q ss_pred             CCC-----CHHHHhCCccccCCC
Q 015867          381 ERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       381 ~R~-----t~~ell~hp~f~~~~  398 (399)
                      +|+     +++|+++||||+.+.
T Consensus       239 ~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         239 KRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             HccCcccCCHHHHHcCcccccCC
Confidence            999     999999999998764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>PHA03211 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=6.7e-44  Score=347.90  Aligned_cols=275  Identities=23%  Similarity=0.347  Sum_probs=203.9

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ...|.+.+.||+|+||.||+|.+..+++.||||....     .....|+++++.+.      |+||+++++++...+..+
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----~~~~~E~~iL~~L~------HpnIv~l~~~~~~~~~~~  236 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----ASSVHEARLLRRLS------HPAVLALLDVRVVGGLTC  236 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----cCHHHHHHHHHHCC------CCCCCcEEEEEEECCEEE
Confidence            3479999999999999999999999999999996432     34567899998885      599999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          145 IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       145 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      +|||++.++|.+++..... .+++..+..|+.||+.||.|||++|||||||||+||||+                     
T Consensus       237 lv~e~~~~~L~~~l~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---------------------  294 (461)
T PHA03211        237 LVLPKYRSDLYTYLGARLR-PLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---------------------  294 (461)
T ss_pred             EEEEccCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---------------------
Confidence            9999998899998876533 699999999999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC-----
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE-----  294 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~-----  294 (399)
                         .++.++|+|||++......     .....||..|+|||++.+..++.++|||||||++|||++|..|+-...     
T Consensus       295 ---~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~  371 (461)
T PHA03211        295 ---GPEDICLGDFGAACFARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDER  371 (461)
T ss_pred             ---CCCCEEEcccCCceecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCccccc
Confidence               4567999999998653222     124579999999999999999999999999999999999876543211     


Q ss_pred             --cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhh------hhhhhhccchhhhhH
Q 015867          295 --NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR------LKNMVSLHVDRARST  366 (399)
Q Consensus       295 --~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~  366 (399)
                        ....+.++.+.......                    .+|..... ...........      ............+.+
T Consensus       372 ~~~~~~l~~~i~~~~~~~~--------------------~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  430 (461)
T PHA03211        372 RPYDAQILRIIRQAQVHVD--------------------EFPQHAGS-RLVSQYRHRAARNRRPAYTRPAWTRYYKLDLD  430 (461)
T ss_pred             CCcHHHHHHHHHhhccccc--------------------cCCCCcch-HHHHHHHhhhhcccCCccCCcchhhhccccch
Confidence              11223333222111100                    01100000 00000000000      000000001134567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +.+||++||+.||.+|||+.|+|+||||++
T Consensus       431 ~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        431 VEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             HHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence            899999999999999999999999999985

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=3.7e-44  Score=354.64  Aligned_cols=254  Identities=25%  Similarity=0.274  Sum_probs=205.3

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ..++|++.+.||+|+||+||+|++..+++.||||++....   .....+..|+.++..+      .|+++++++..+...
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~------~h~~iv~~~~~~~~~  103 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNC------DFFSIVKCHEDFAKK  103 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcC------CCCcEEEeecceecc
Confidence            3468999999999999999999999999999999986532   2223445566655554      468999988766432


Q ss_pred             C--------eEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccccc
Q 015867          141 N--------HICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK  209 (399)
Q Consensus       141 ~--------~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~  209 (399)
                      +        .+++||||+ +++|.+++....  ...+++..+..++.|++.||+|||++||+||||||+|||++      
T Consensus       104 ~~~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~------  177 (496)
T PTZ00283        104 DPRNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC------  177 (496)
T ss_pred             cccCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe------
Confidence            2        478999999 999999987532  23689999999999999999999999999999999999994      


Q ss_pred             CCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 015867          210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  284 (399)
                                        .++.+||+|||++.....     .....+||+.|+|||++.+..++.++|||||||++|+|+
T Consensus       178 ------------------~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLl  239 (496)
T PTZ00283        178 ------------------SNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELL  239 (496)
T ss_pred             ------------------CCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence                              466799999999865322     234567999999999999999999999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       285 ~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                      +|..||.+.+..+....+......                                                 ..++.++
T Consensus       240 tG~~Pf~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~  270 (496)
T PTZ00283        240 TLKRPFDGENMEEVMHKTLAGRYD-------------------------------------------------PLPPSIS  270 (496)
T ss_pred             HCCCCCCCCCHHHHHHHHhcCCCC-------------------------------------------------CCCCCCC
Confidence            999999887665554443221100                                                 1123567


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      .++.+||.+||+.||.+||++.++++|||++.
T Consensus       271 ~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~  302 (496)
T PTZ00283        271 PEMQEIVTALLSSDPKRRPSSSKLLNMPICKL  302 (496)
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence            78999999999999999999999999999875

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=100.00  E-value=5e-44  Score=335.79  Aligned_cols=284  Identities=26%  Similarity=0.476  Sum_probs=204.9

Q ss_pred             eeeccccceEEEEEEEcc--CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--CCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQ--TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--RNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~--~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--~~~~~lv~  147 (399)
                      .+||+|+||.||+|++..  ++..||+|.+.... .......|+++++.+.      |+||+++++++..  +...++||
T Consensus         7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~~~lv~   79 (317)
T cd07867           7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG-ISMSACREIALLRELK------HPNVIALQKVFLSHSDRKVWLLF   79 (317)
T ss_pred             eEeccCCCeeEEEEEecCCCccceEEEEEecCCC-CcHHHHHHHHHHHhCC------CCCeeeEEEEEeccCCCeEEEEE
Confidence            579999999999998653  56889999986532 2345667888888875      5999999998753  56889999


Q ss_pred             ccCCCCHHHHHHhc-------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          148 EKLGPSLFDFLKRN-------KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       148 e~~~~~L~~~l~~~-------~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ||++++|.+++...       ....+++..+..++.||+.||.|||++||+||||||+|||+..++              
T Consensus        80 e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~--------------  145 (317)
T cd07867          80 DYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG--------------  145 (317)
T ss_pred             eeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCC--------------
Confidence            99988999888532       122488999999999999999999999999999999999995432              


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                            +.++.+||+|||++......      .....||+.|+|||++.+. .++.++|||||||++|+|++|.+||...
T Consensus       146 ------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~  219 (317)
T cd07867         146 ------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR  219 (317)
T ss_pred             ------CCCCcEEEeeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence                  35678999999998754322      2345789999999999774 5899999999999999999999999754


Q ss_pred             Cc---------HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          294 EN---------LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       294 ~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                      ..         ......+....+.+....+......... .....  .+......         ...............+
T Consensus       220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~  287 (317)
T cd07867         220 QEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEY-PTLQK--DFRRTTYA---------NSSLIKYMEKHKVKPD  287 (317)
T ss_pred             cccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccc-hhhhh--hhcccccC---------CchhhhhhhcccCCCC
Confidence            32         2445555565555554444433221100 00000  00000000         0000011111123345


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ..+.+||.+||+.||.+|||++|+|+||||
T Consensus       288 ~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f  317 (317)
T cd07867         288 SKVFLLLQKLLTMDPTKRITSEQALQDPYF  317 (317)
T ss_pred             hHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence            678999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=5.7e-44  Score=352.90  Aligned_cols=253  Identities=25%  Similarity=0.281  Sum_probs=208.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccC-CeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQT-QERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..|.+.+.||+|+||.||+|.+..+ +..||+|.+.... .....+..|+.+++.+.      ||||+++++++...+.+
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~------Hpniv~~~~~~~~~~~~  140 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACD------HFGIVKHFDDFKSDDKL  140 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCC------CCCEeEEEEEEEECCEE
Confidence            4599999999999999999998877 7889999765432 22334556777777764      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ||||||+ +++|.+++...  ....+++..+..++.||+.||+|||+.||+||||||+|||++                 
T Consensus       141 ~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-----------------  203 (478)
T PTZ00267        141 LLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM-----------------  203 (478)
T ss_pred             EEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC-----------------
Confidence            9999999 99999988642  223589999999999999999999999999999999999993                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                             .++.+||+|||++......     ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus       204 -------~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~  276 (478)
T PTZ00267        204 -------PTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ  276 (478)
T ss_pred             -------CCCcEEEEeCcCceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH
Confidence                   4677999999998754322     3456799999999999999999999999999999999999999988776


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+....+......                                                 ..+..++.++.+||.+||
T Consensus       277 ~~~~~~~~~~~~~-------------------------------------------------~~~~~~s~~~~~li~~~L  307 (478)
T PTZ00267        277 REIMQQVLYGKYD-------------------------------------------------PFPCPVSSGMKALLDPLL  307 (478)
T ss_pred             HHHHHHHHhCCCC-------------------------------------------------CCCccCCHHHHHHHHHHh
Confidence            6555544332110                                                 011245678899999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCC
Q 015867          376 RYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ..||.+|||+.+++.|||++.+
T Consensus       308 ~~dP~~Rps~~~~l~~~~~~~~  329 (478)
T PTZ00267        308 SKNPALRPTTQQLLHTEFLKYV  329 (478)
T ss_pred             ccChhhCcCHHHHHhCHHHHHH
Confidence            9999999999999999998753

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=5.7e-44  Score=365.22  Aligned_cols=278  Identities=27%  Similarity=0.435  Sum_probs=215.1

Q ss_pred             eccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           58 FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        58 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      +..++.+.++|++++.||.|+||+||+|++..+++.||+|++...   ......+..|+.+++.|.      ||||++++
T Consensus         5 ~~~ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~------HPNIVrl~   78 (1021)
T PTZ00266          5 YDDGESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELK------HKNIVRYI   78 (1021)
T ss_pred             ccCCccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcC------CCCcCeEE
Confidence            455677788999999999999999999999999999999998642   233456777888888885      59999999


Q ss_pred             eeecc--CCeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHC-------CccccCCCCCcEEE
Q 015867          135 NWFDY--RNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLESVAYMHDL-------RLIHTDLKPENILL  202 (399)
Q Consensus       135 ~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~-------givH~Dikp~NIll  202 (399)
                      ++|..  ...+||||||+ +++|.++|....  ...+++..++.|+.||+.||.|||+.       +||||||||+||||
T Consensus        79 d~f~de~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL  158 (1021)
T PTZ00266         79 DRFLNKANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFL  158 (1021)
T ss_pred             EEEEecCCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEe
Confidence            98854  46799999999 899999997532  23599999999999999999999985       49999999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhC--CCCCCcchhHHHHH
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGC  278 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~  278 (399)
                      ..+... +....      ......+....+||+|||++.....  .....+||+.|+|||++.+  ..++.++|||||||
T Consensus       159 ~s~~~~-lg~i~------~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~  231 (1021)
T PTZ00266        159 STGIRH-IGKIT------AQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGC  231 (1021)
T ss_pred             ecCccc-ccccc------ccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHH
Confidence            653210 00000      0001113456799999999875432  2345679999999999965  45899999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          279 ILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       279 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      |||+|++|..||...+....+.........                                                 .
T Consensus       232 ILYELLTGk~PF~~~~~~~qli~~lk~~p~-------------------------------------------------l  262 (1021)
T PTZ00266        232 IIYELCSGKTPFHKANNFSQLISELKRGPD-------------------------------------------------L  262 (1021)
T ss_pred             HHHHHHHCCCCCCcCCcHHHHHHHHhcCCC-------------------------------------------------C
Confidence            999999999999876654443332211100                                                 0


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ....++.++.+||..||..||.+|||+.|+|.||||+.+
T Consensus       263 pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i  301 (1021)
T PTZ00266        263 PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNV  301 (1021)
T ss_pred             CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence            112346778999999999999999999999999999865

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=4.4e-44  Score=328.65  Aligned_cols=253  Identities=23%  Similarity=0.415  Sum_probs=205.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-----
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-----  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-----  139 (399)
                      .+.|++.+.||+|+||.||+|.+..+++.||+|.+.........+..|+.++..+.     +|+|++++++++..     
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~   79 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-----HHRNIATYYGAFIKKNPPG   79 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhc-----CCCCeeeEeeEEeecCCCC
Confidence            45699999999999999999999999999999999765555566777888887764     36999999998865     


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          140 -RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       140 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                       ...+++||||+ +++|.+++.......+++..+..++.|++.||+|||++||+|+||||+||+++              
T Consensus        80 ~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~--------------  145 (272)
T cd06637          80 MDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT--------------  145 (272)
T ss_pred             CCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEEC--------------
Confidence             24689999999 88999999876555799999999999999999999999999999999999993              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                .++.++|+|||++.....   ......|+..|+|||++.     +..++.++|+|||||++|+|++|..|
T Consensus       146 ----------~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p  215 (272)
T cd06637         146 ----------ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPP  215 (272)
T ss_pred             ----------CCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence                      466799999999865322   234567899999999986     34688899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |...........+....                                                ........++.++.+
T Consensus       216 ~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~~  247 (272)
T cd06637         216 LCDMHPMRALFLIPRNP------------------------------------------------APRLKSKKWSKKFQS  247 (272)
T ss_pred             ccccCHHHHHHHHhcCC------------------------------------------------CCCCCCCCcCHHHHH
Confidence            97654433222211100                                                000111245677899


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccc
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ||.+||..||.+|||+.+++.||||
T Consensus       248 li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         248 FIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             HHHHHcCCChhhCCCHHHHhhCCCC
Confidence            9999999999999999999999998

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=8.5e-44  Score=334.17  Aligned_cols=254  Identities=30%  Similarity=0.474  Sum_probs=209.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||||.+.....    ....+..|+++++.+.      |++|+++++.+....
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~   74 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLD------HPFLPTLYASFQTET   74 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCC------CCCchhheeeeecCC
Confidence            369999999999999999999998999999999875322    2344666777777765      589999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||+ +++|.+++.+.....+++..+..++.|++.||+|||+.|++|+||||+||+++                 
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~-----------------  137 (316)
T cd05574          75 YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH-----------------  137 (316)
T ss_pred             EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc-----------------
Confidence            999999999 99999999876555799999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC--------------------------------CcccccCCCccchhhhhCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN--------------------------------HSSIVSTRHYRAPEVILGLGWS  268 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--------------------------------~~~~~gt~~y~aPE~~~~~~~~  268 (399)
                             .++.++|+|||++......                                .....||..|+|||++.+..++
T Consensus       138 -------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~  210 (316)
T cd05574         138 -------ESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHG  210 (316)
T ss_pred             -------CCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCC
Confidence                   4566888888876542111                                1234689999999999998999


Q ss_pred             CcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHh
Q 015867          269 YPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK  348 (399)
Q Consensus       269 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  348 (399)
                      .++||||||+++|+|++|..||.+.+.......+......                        ++.             
T Consensus       211 ~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~------------------------~~~-------------  253 (316)
T cd05574         211 SAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVT------------------------FPG-------------  253 (316)
T ss_pred             chHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCcc------------------------CCC-------------
Confidence            9999999999999999999999887766555444321111                        111             


Q ss_pred             hhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCC----HHHHhCCccccCC
Q 015867          349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT----ARQALNHPFFRNL  397 (399)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t----~~ell~hp~f~~~  397 (399)
                                 ....+..+.+||.+||+.||.+|||    ++|+++||||++.
T Consensus       254 -----------~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~  295 (316)
T cd05574         254 -----------SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGV  295 (316)
T ss_pred             -----------ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcC
Confidence                       0125778899999999999999999    9999999999885

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=100.00  E-value=2.1e-43  Score=334.34  Aligned_cols=282  Identities=29%  Similarity=0.530  Sum_probs=217.5

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC-
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-  140 (399)
                      +.++|++.+.||+|+||.||+|.+..+|+.||||.+...  ......+..|+.+++.++      |+||+++++++... 
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~   76 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFK------HENIIGILDIIRPPS   76 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCC------CCCcCchhheeeccc
Confidence            457899999999999999999999999999999998642  223344566888888775      58999998876543 


Q ss_pred             ----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          141 ----NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       141 ----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                          ...|+||||++++|.+++...   .+++..+..++.|++.||+|||+.||+||||||+|||+              
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill--------------  139 (336)
T cd07849          77 FESFNDVYIVQELMETDLYKLIKTQ---HLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLL--------------  139 (336)
T ss_pred             ccccceEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEE--------------
Confidence                468999999988999888654   49999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                +.++.++|+|||++......      .....||..|+|||.+.+ ..++.++|||||||++|+|++|+.|
T Consensus       140 ----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~  209 (336)
T cd07849         140 ----------NTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPL  209 (336)
T ss_pred             ----------CCCCCEEECcccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                      44677999999987653221      123568999999998765 4689999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+.......+....+.++...+..........+....    +..               .........+..+.++.+
T Consensus       210 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~~~~~~~~~~  270 (336)
T cd07849         210 FPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSL----PFK---------------PKVPWNKLFPNADPKALD  270 (336)
T ss_pred             CCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhc----CcC---------------CcccHHHHhcccCcHHHH
Confidence            9988877777777777776655444333221111110000    000               000001112345788999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+||+.||.+|||+.|+++||||++.
T Consensus       271 li~~~l~~dP~~Rpt~~e~l~hp~~~~~  298 (336)
T cd07849         271 LLDKMLTFNPHKRITVEEALAHPYLEQY  298 (336)
T ss_pred             HHHHHcCCChhhCcCHHHHhcCcccccc
Confidence            9999999999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=100.00  E-value=2.9e-43  Score=325.41  Aligned_cols=277  Identities=33%  Similarity=0.544  Sum_probs=218.4

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|++++.||.|++|.||+|++..+++.||||.++....   ....+..|+++++.+.      |+||+++++++.+.+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~   74 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN------HPNIVKLLDVIHTENKL   74 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcC------CCCCcchhhhcccCCcE
Confidence            48999999999999999999999999999998864321   2245667888888875      59999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||+.++|.+++.......+++..+..++.|++.||+|||+.|++|+||+|+||+++                    
T Consensus        75 ~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~--------------------  134 (284)
T cd07860          75 YLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN--------------------  134 (284)
T ss_pred             EEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC--------------------
Confidence            999999977899998876555799999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                          .++.++|+|||++......   .....++..|+|||++.+.. ++.++|+||||+++|+|++|..||...+..+..
T Consensus       135 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~  210 (284)
T cd07860         135 ----TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL  210 (284)
T ss_pred             ----CCCCEEEeeccchhhcccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                4667999999987653322   23345788999999887654 688999999999999999999999988888888


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      .++.+..+..+..+++.........      ..++..               .........+.++.++.+||.+||+.||
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---------------~~~~~~~~~~~~~~~~~~li~~~l~~~P  269 (284)
T cd07860         211 FRIFRTLGTPDEVVWPGVTSLPDYK------PSFPKW---------------ARQDFSKVVPPLDEDGRDLLSQMLHYDP  269 (284)
T ss_pred             HHHHHHhCCCChhhhhhhhHHHHHH------hhcccc---------------cccCHHHHcccCCHHHHHHHHHhcCCCc
Confidence            8887777766655443221110000      000000               0000011123567788999999999999


Q ss_pred             CCCCCHHHHhCCccc
Q 015867          380 SERLTARQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~~ell~hp~f  394 (399)
                      .+|||++++++||||
T Consensus       270 ~~Rpt~~~~l~~~~f  284 (284)
T cd07860         270 NKRISAKAALAHPFF  284 (284)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=9.4e-44  Score=335.52  Aligned_cols=291  Identities=18%  Similarity=0.222  Sum_probs=202.7

Q ss_pred             EEeeeccc--cceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           70 ILSKMGEG--TFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        70 ~~~~lG~G--~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ++++||+|  +|++||++.+..+|+.||+|.+....   .....+..|+++++.+.      ||||+++++++..++..+
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------hpniv~~~~~~~~~~~~~   75 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFN------HPNIVPYRATFIADNELW   75 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcC------CCCeeeEEEEEEECCEEE
Confidence            56789999  78999999999999999999986532   22344566777777764      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.                   
T Consensus        76 lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~-------------------  136 (327)
T cd08227          76 VVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISV-------------------  136 (327)
T ss_pred             EEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEec-------------------
Confidence            999999 899999997654446999999999999999999999999999999999999954                   


Q ss_pred             ccCCCCCceEEeecCCcccC----------CCCCcccccCCCccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          224 RCLPKSSAIKLIDFGSTAFD----------NQNHSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~----------~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                           ++.++++||+.....          ........++..|+|||++.+  ..++.++|||||||++|+|++|..||.
T Consensus       137 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  211 (327)
T cd08227         137 -----DGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFK  211 (327)
T ss_pred             -----CCcEEEcccchhhccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCC
Confidence                 455777777643221          011123356788999999976  468999999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCc----ccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGS----RLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL  367 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (399)
                      .............  +..+..+ ...............    ...+..+.....     ................+++++
T Consensus       212 ~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~  283 (327)
T cd08227         212 DMPATQMLLEKLN--GTVPCLL-DTTTIPAEELTMKPSRSGANSGLGESTTVST-----PRPSNGESSSHPYNRTFSPHF  283 (327)
T ss_pred             CcchhHHHHHHhc--CCccccc-cccchhhhhcccCCcccCCcCCCCcccccCC-----cCccccCCcccccccccCHHH
Confidence            6554433322221  1111100 000000000000000    000000000000     000000011112234567889


Q ss_pred             HHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          368 TDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .+||.+||+.||.+|||++|+++||||+++.
T Consensus       284 ~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~  314 (327)
T cd08227         284 HHFVEQCLQRNPDARPSASTLLNHSFFKQIK  314 (327)
T ss_pred             HHHHHHHHhhCchhcCCHHHHhcChhhhhcc
Confidence            9999999999999999999999999999864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=100.00  E-value=3.5e-43  Score=326.63  Aligned_cols=280  Identities=33%  Similarity=0.517  Sum_probs=215.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||||.++....   ....+..|+.+++.+.+     |+||+++++.+...+.
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~-----~~~i~~~~~~~~~~~~   75 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSE-----SIYIVRLLDVEHVEEK   75 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccC-----CCCccceeeeEeecCC
Confidence            369999999999999999999999999999999864321   22456678888888753     5899999998876655


Q ss_pred             -----EEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          143 -----ICIVFEKLGPSLFDFLKRNK---YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       143 -----~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                           .|+||||+.++|.+++....   ...+++..+..++.||+.||.|||++||+||||||+||+++.          
T Consensus        76 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~----------  145 (295)
T cd07837          76 NGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK----------  145 (295)
T ss_pred             CCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec----------
Confidence                 89999999778999886543   235899999999999999999999999999999999999942          


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                                   .++.++|+|||.+......   .....+++.|+|||++.+ ..++.++|+||||+++|+|++|..||
T Consensus       146 -------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~  212 (295)
T cd07837         146 -------------QKGLLKIADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLF  212 (295)
T ss_pred             -------------CCCeEEEeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCC
Confidence                         2677999999987653222   123357889999999875 45799999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .+.+..+....+......++...+.......                   .......   ..........+.++.++.+|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~---~~~~~~~~~~~~~~~~~~~~  270 (295)
T cd07837         213 PGDSELQQLLHIFKLLGTPTEQVWPGVSKLR-------------------DWHEFPQ---WKPQDLSRAVPDLSPEGLDL  270 (295)
T ss_pred             CCCCHHHHHHHHHHHhCCCChhhCcchhhcc-------------------chhhcCc---ccchhHHHhccccCHHHHHH
Confidence            9888888777777665554443322111100                   0000000   00000011224577889999


Q ss_pred             HHHccccCCCCCCCHHHHhCCcccc
Q 015867          371 LHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      |.+||..||.+|||+.|++.||||+
T Consensus       271 i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         271 LQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             HHHHccCChhhcCCHHHHhcCCCcC
Confidence            9999999999999999999999995

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=1.8e-43  Score=326.57  Aligned_cols=253  Identities=25%  Similarity=0.444  Sum_probs=205.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-----
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-----  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-----  139 (399)
                      .+.|++.+.||+|+||.||+|.+..+++.+|+|++.........+..|+.+++.+.     .|+|++++++++..     
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~   89 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYS-----HHRNIATYYGAFIKKSPPG   89 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhc-----CCCcEEEEeeehhcccccC
Confidence            35799999999999999999999999999999998765555566777888887774     46999999998853     


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          140 -RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       140 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                       .+..|+||||+ +++|.+++.......+++..+..++.||+.||.|||+.||+|+||||+||++.              
T Consensus        90 ~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~--------------  155 (282)
T cd06636          90 HDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT--------------  155 (282)
T ss_pred             CCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC--------------
Confidence             46889999999 88999999876655689999999999999999999999999999999999994              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                .++.++|+|||++.....   ......|+..|+|||++.     +..++.++|+|||||++|+|++|..|
T Consensus       156 ----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p  225 (282)
T cd06636         156 ----------ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPP  225 (282)
T ss_pred             ----------CCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCC
Confidence                      456799999998765332   234567899999999986     34688899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |...........+...   .+.                                             ......++.++.+
T Consensus       226 ~~~~~~~~~~~~~~~~---~~~---------------------------------------------~~~~~~~~~~~~~  257 (282)
T cd06636         226 LCDMHPMRALFLIPRN---PPP---------------------------------------------KLKSKKWSKKFID  257 (282)
T ss_pred             ccccCHHhhhhhHhhC---CCC---------------------------------------------CCcccccCHHHHH
Confidence            9765443332222110   000                                             0011245778899


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccc
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ||.+||..||.+|||+.||++||||
T Consensus       258 li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         258 FIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             HHHHHhCCChhhCcCHHHHhcCCCC
Confidence            9999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=100.00  E-value=6e-45  Score=317.76  Aligned_cols=289  Identities=29%  Similarity=0.505  Sum_probs=224.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccC----CeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQT----QERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~----~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..|++++.||+|.||.||+|....+    .+.||||.++...   .......+|+.+++++.|      +|++.+...|.
T Consensus        24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h------~nvi~Lv~Vfl   97 (438)
T KOG0666|consen   24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKH------PNVISLVKVFL   97 (438)
T ss_pred             HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcC------CcchhHHHHHh
Confidence            3599999999999999999965544    3379999986532   334557789999999975      99999988887


Q ss_pred             c-CCeEEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          139 Y-RNHICIVFEKLGPSLFDFLKRNK---YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       139 ~-~~~~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      . +...++++||..-+|+++|+-+.   .+.++...++.|+.||+.|++|||++-|+||||||.|||+..+|        
T Consensus        98 ~~d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdg--------  169 (438)
T KOG0666|consen   98 SHDKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDG--------  169 (438)
T ss_pred             ccCceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccC--------
Confidence            7 88999999999999999996432   24699999999999999999999999999999999999998776        


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE  287 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~  287 (399)
                                  ...+.|||+|||+++......      ...+-|.+|+|||.+.|. .|++++|||++|||+.||++-+
T Consensus       170 ------------perG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~  237 (438)
T KOG0666|consen  170 ------------PERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLE  237 (438)
T ss_pred             ------------CccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccC
Confidence                        568999999999998654432      234679999999999986 6999999999999999999999


Q ss_pred             CCCCCCC---------cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHH----hhhhhhh
Q 015867          288 ALFQTHE---------NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK----KLDRLKN  354 (399)
Q Consensus       288 ~Pf~~~~---------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~----~~~~~~~  354 (399)
                      +.|.+..         ..+++.+|++.++.+.+.-|+....-             |+...   .+..++    ....+.+
T Consensus       238 PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~-------------Pe~q~---~ls~f~~~~~~n~sL~~  301 (438)
T KOG0666|consen  238 PLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKM-------------PEYQT---LLSDFRRHYYDNVSLHK  301 (438)
T ss_pred             ccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhC-------------cchHH---HHHHhHHhhcCcchHHH
Confidence            9996532         46789999999999887665554322             22110   011111    0000111


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .-... ..-++...+|+.+||.+||-+|+|++++|+|+||..-
T Consensus       302 ~~~~~-k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d  343 (438)
T KOG0666|consen  302 YYHKH-KVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTED  343 (438)
T ss_pred             HHHHh-cCCCchHHHHHHHHhccCchhhccHHHHhcccccccC
Confidence            11111 1123447799999999999999999999999999863

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=100.00  E-value=5.3e-43  Score=323.75  Aligned_cols=278  Identities=36%  Similarity=0.603  Sum_probs=221.6

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|++.+.||.|+||.||+|.+..+|+.||+|++....   .....+..|+.+++.+.      |+|++++++++..+...
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~   74 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQ------HPYVVKLLDVFPHGSGF   74 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCC------CCCCcceeeEEecCCee
Confidence            5899999999999999999998899999999987532   22345667777777775      59999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||++++|.+++.... ..+++..+..++.||+.||+|||+.|++|+||||+||+++                    
T Consensus        75 ~~v~e~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~--------------------  133 (286)
T cd07832          75 VLVMEYMPSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS--------------------  133 (286)
T ss_pred             EEEecccCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc--------------------
Confidence            9999999999999987654 3699999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                          .++.++|+|||.+......    .....|+..|+|||++.+. .++.++||||||+++|+|++|.+||.+.+..+.
T Consensus       134 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~  209 (286)
T cd07832         134 ----ADGVLKIADFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQ  209 (286)
T ss_pred             ----CCCcEEEeeeeecccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHH
Confidence                4667999999987654332    2345789999999998754 468999999999999999999999998888888


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +..+....+.+....++...+....     ....++......               .....+..+..+.+||.+||..|
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---------------~~~~~~~~~~~~~~li~~~l~~~  269 (286)
T cd07832         210 LAIVFRTLGTPNEETWPGLTSLPDY-----NKITFPESKPIP---------------LEEIFPDASPEALDLLKGLLVYD  269 (286)
T ss_pred             HHHHHHHcCCCChHHHhhccCcchh-----hcccCCCCCcch---------------HHHhCCCccHHHHHHHHHHhccC
Confidence            8888777777666555543221110     011111111000               01112455688999999999999


Q ss_pred             CCCCCCHHHHhCCcccc
Q 015867          379 PSERLTARQALNHPFFR  395 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~  395 (399)
                      |.+|||++++++||||.
T Consensus       270 p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         270 PSKRLSAAEALRHPYFT  286 (286)
T ss_pred             hhhCCCHHHHhhCcCcC
Confidence            99999999999999994

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=5.4e-43  Score=318.66  Aligned_cols=249  Identities=24%  Similarity=0.405  Sum_probs=204.5

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-CCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-RNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~  142 (399)
                      +|++.+.||.|++|.||++.+..+++.||+|.+....   .....+..|+++++.+.      |+|++++++.+.. +..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~   74 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLK------HPNIVAYRESWEGEDGL   74 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCC------CCCeeeeeeeecCCCCE
Confidence            4999999999999999999999999999999986432   22344566777777764      5899999988764 457


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+||||+ +++|.+++.......+++..+..++.|++.||++||+.||+|+||||+||+++                  
T Consensus        75 ~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~------------------  136 (257)
T cd08223          75 LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT------------------  136 (257)
T ss_pred             EEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe------------------
Confidence            89999999 89999999875555689999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                            .++.++|+|||++.....   ......|++.|+|||++.+..++.++|+||||+++|+|++|+.||...+....
T Consensus       137 ------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~  210 (257)
T cd08223         137 ------RTNIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSL  210 (257)
T ss_pred             ------cCCcEEEecccceEEecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHH
Confidence                  466799999998765322   22345789999999999999999999999999999999999999987665444


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.....  +                                               ..+..++.++.+||.+||+.|
T Consensus       211 ~~~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~  241 (257)
T cd08223         211 VYRIIEGKL--P-----------------------------------------------PMPKDYSPELGELIATMLSKR  241 (257)
T ss_pred             HHHHHhcCC--C-----------------------------------------------CCccccCHHHHHHHHHHhccC
Confidence            433322111  0                                               011345678899999999999


Q ss_pred             CCCCCCHHHHhCCccc
Q 015867          379 PSERLTARQALNHPFF  394 (399)
Q Consensus       379 P~~R~t~~ell~hp~f  394 (399)
                      |.+|||+.++++||||
T Consensus       242 p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         242 PEKRPSVKSILRQPYI  257 (257)
T ss_pred             cccCCCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=100.00  E-value=3.9e-43  Score=326.85  Aligned_cols=279  Identities=30%  Similarity=0.471  Sum_probs=218.9

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhh------hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY------RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +|++.+.||.|+||.||+|.+..+++.||||.++.....      ...+..|+++++.+.      |+||+++++++.+.
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~   74 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELK------HPNIIGLLDVFGHK   74 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcC------CCCChhhhheeecC
Confidence            589999999999999999999889999999999754322      233456777777664      59999999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          141 NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       141 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      +..++||||++++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+|||++                 
T Consensus        75 ~~~~lv~e~~~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~-----------------  136 (298)
T cd07841          75 SNINLVFEFMETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA-----------------  136 (298)
T ss_pred             CEEEEEEcccCCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc-----------------
Confidence            9999999999889999997754 3599999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             .++.++|+|||++......   .....++..|+|||.+.+ ..++.++|+|||||++|+|++|.+||.+.+..
T Consensus       137 -------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~  209 (298)
T cd07841         137 -------SDGVLKLADFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI  209 (298)
T ss_pred             -------CCCCEEEccceeeeeccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH
Confidence                   4677999999988654332   233456888999999865 46789999999999999999999999988887


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +.+.++....+.+....+......... .........+                     ........+..+.+||.+||+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---------------------~~~~~~~~~~~~~~li~~~l~  267 (298)
T cd07841         210 DQLGKIFEALGTPTEENWPGVTSLPDY-VEFKPFPPTP---------------------LKQIFPAASDDALDLLQRLLT  267 (298)
T ss_pred             HHHHHHHHHcCCCchhhhhhccccccc-ccccccCCcc---------------------hhhhcccccHHHHHHHHHHhc
Confidence            877777776665555444432211110 0000000000                     011123457788999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCCC
Q 015867          377 YDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .||.+|||+.|+++||||++..
T Consensus       268 ~~P~~R~s~~e~l~~~~~~~~~  289 (298)
T cd07841         268 LNPNKRITARQALEHPYFSNDP  289 (298)
T ss_pred             CCcccCcCHHHHhhCccccCCC
Confidence            9999999999999999999853

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=100.00  E-value=3.7e-43  Score=328.87  Aligned_cols=282  Identities=30%  Similarity=0.447  Sum_probs=219.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC-
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-  140 (399)
                      .++|++.+.||.|+||.||+|.+..+|+.||+|.++....   .......|+.+++.+.      |+|++++++++... 
T Consensus         6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~   79 (309)
T cd07845           6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLR------HPNIVELKEVVVGKH   79 (309)
T ss_pred             ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCC------CCCCcceEEEEecCC
Confidence            3579999999999999999999999999999999864321   1223456888888775      58999999988754 


Q ss_pred             -CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 -NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 -~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                       +..++||||++++|.+++.... ..+++..+..++.||+.||+|||+.|++|+||||+||+++                
T Consensus        80 ~~~~~lv~e~~~~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~----------------  142 (309)
T cd07845          80 LDSIFLVMEYCEQDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT----------------  142 (309)
T ss_pred             CCeEEEEEecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC----------------
Confidence             5789999999889999987643 3689999999999999999999999999999999999993                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                              .++.++|+|||.+......   .....++..|+|||++.+ ..++.++|+|||||++|+|++|.+||...+.
T Consensus       143 --------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~  214 (309)
T cd07845         143 --------DKGCLKIADFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSE  214 (309)
T ss_pred             --------CCCCEEECccceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence                    4667999999988654332   223346788999999876 4689999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+.+..+....+..+..+++.........-     ...+...              .. .........+.++.+||.+||
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~--------------~~-~~~~~~~~~~~~~~~li~~ml  274 (309)
T cd07845         215 IEQLDLIIQLLGTPNESIWPGFSDLPLVGK-----FTLPKQP--------------YN-NLKHKFPWLSEAGLRLLNFLL  274 (309)
T ss_pred             HHHHHHHHHhcCCCChhhchhhhccccccc-----ccccCCC--------------CC-chHHhccccCHHHHHHHHHHh
Confidence            898888888877766655443321111000     0000000              00 000111235778899999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCC
Q 015867          376 RYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +.||.+|||+.++++||||++.
T Consensus       275 ~~dp~~R~t~~~il~h~~f~~~  296 (309)
T cd07845         275 MYDPKKRATAEEALESSYFKEK  296 (309)
T ss_pred             cCChhhCcCHHHHhcChhhccC
Confidence            9999999999999999999864

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=100.00  E-value=4e-43  Score=326.19  Aligned_cols=284  Identities=32%  Similarity=0.542  Sum_probs=222.2

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++.+.||.|++|.||+|.+..+++.||+|.+....   .....+..|+++++.+.      |+|++++++++...+.
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~   75 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQ------HGNIVRLQDVVHSEKR   75 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhcc------CCCEeeEEEEEecCCe
Confidence            47999999999999999999999899999999886432   22345667888888775      5999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .|+||||++++|.+++.......+++..+..++.||+.||+|||++|++|+||||+||+++.                  
T Consensus        76 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~------------------  137 (294)
T PLN00009         76 LYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR------------------  137 (294)
T ss_pred             EEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC------------------
Confidence            99999999889999887665545788999999999999999999999999999999999953                  


Q ss_pred             cccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           .+..+||+|||++......   .....+++.|+|||++.+. .++.++|+||||+++|+|++|.+||...+..+.
T Consensus       138 -----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~  212 (294)
T PLN00009        138 -----RTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE  212 (294)
T ss_pred             -----CCCEEEEcccccccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                 3456899999988653322   2334678999999998764 578999999999999999999999998888777


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+....+.++...+......... ...  ...|+.                  .......+.++.++.+||.+||+.|
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~------------------~~~~~~~~~~~~~~~~~i~~~l~~~  271 (294)
T PLN00009        213 LFKIFRILGTPNEETWPGVTSLPDY-KSA--FPKWPP------------------KDLATVVPTLEPAGVDLLSKMLRLD  271 (294)
T ss_pred             HHHHHHHhCCCChhhccccccchhh-hhh--cccCCC------------------CCHHHhCcCCChHHHHHHHHHccCC
Confidence            7777776666555543322111000 000  000100                  0011123456788999999999999


Q ss_pred             CCCCCCHHHHhCCccccCCCC
Q 015867          379 PSERLTARQALNHPFFRNLNE  399 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~~e  399 (399)
                      |.+||++.++++||||.++.+
T Consensus       272 P~~Rps~~~~l~~~~~~~~~~  292 (294)
T PLN00009        272 PSKRITARAALEHEYFKDLGD  292 (294)
T ss_pred             hhhCcCHHHHhcCchHhHHhc
Confidence            999999999999999998753

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=100.00  E-value=5.9e-43  Score=322.81  Aligned_cols=275  Identities=34%  Similarity=0.557  Sum_probs=215.8

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC--CeE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR--NHI  143 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~--~~~  143 (399)
                      |++.+.||+|+||.||+|.+..+++.||+|.++....  .......|+.++..+.     +|+|++++++++.+.  +..
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~~~~~~~   75 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLS-----PHPNILRLIEVLFDRKTGRL   75 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcC-----CCCCccceEEEEecCCCCcE
Confidence            6789999999999999999999999999999865321  1222345666666554     479999999999887  899


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||++++|.+.+..... .+++..+..++.|++.||+|||+.|++|+||||+||+++                    
T Consensus        76 ~lv~e~~~~~l~~~l~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~--------------------  134 (282)
T cd07831          76 ALVFELMDMNLYELIKGRKR-PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK--------------------  134 (282)
T ss_pred             EEEEecCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc--------------------
Confidence            99999997799988876432 589999999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                          . +.++|+|||++......  .....++..|+|||++.. ..++.++|+|||||++|+|++|.+||.+.+..+...
T Consensus       135 ----~-~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~  209 (282)
T cd07831         135 ----D-DILKLADFGSCRGIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIA  209 (282)
T ss_pred             ----C-CCeEEEecccccccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHH
Confidence                3 77999999988653322  234568899999998754 467899999999999999999999999988888888


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+....+..+..+..........      ...+|....               .......+.++.++.+||.+||+.||.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~---------------~~~~~~~~~~~~~~~~li~~~l~~~P~  268 (282)
T cd07831         210 KIHDVLGTPDAEVLKKFRKSRHM------NYNFPSKKG---------------TGLRKLLPNASAEGLDLLKKLLAYDPD  268 (282)
T ss_pred             HHHHHcCCCCHHHHHhhcccccc------cccCccccc---------------ccHHHHcccccHHHHHHHHHHhccCcc
Confidence            88888887777664333211110      111221100               000111235688899999999999999


Q ss_pred             CCCCHHHHhCCccc
Q 015867          381 ERLTARQALNHPFF  394 (399)
Q Consensus       381 ~R~t~~ell~hp~f  394 (399)
                      +|||+.++++||||
T Consensus       269 ~R~~~~~~l~~~~~  282 (282)
T cd07831         269 ERITAKQALRHPYF  282 (282)
T ss_pred             cccCHHHHhhCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.7e-44  Score=332.75  Aligned_cols=254  Identities=28%  Similarity=0.455  Sum_probs=200.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEec---chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ...|+++++||+||.+.||++.... ...||+|.+..   ....-..+..|+..|..|+     +|.+|+++++|-..++
T Consensus       360 g~~Yeilk~iG~GGSSkV~kV~~s~-~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLk-----g~~~IIqL~DYEv~d~  433 (677)
T KOG0596|consen  360 GREYEILKQIGSGGSSKVFKVLNSD-KQIYALKKVVLLEADNQTLDGYRNEIALLNKLK-----GHDKIIQLYDYEVTDG  433 (677)
T ss_pred             cchhhHHHhhcCCCcceeeeeecCC-CcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhc-----CCceEEEEeeeeccCc
Confidence            3469999999999999999997644 45577776532   1233456888999999998     4679999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          142 HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       142 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ++|+||||=..+|.++|++... ..+.-.++.|..||+.|+.++|..||||.||||.|+|+.                  
T Consensus       434 ~lYmvmE~Gd~DL~kiL~k~~~-~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV------------------  494 (677)
T KOG0596|consen  434 YLYMVMECGDIDLNKILKKKKS-IDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV------------------  494 (677)
T ss_pred             eEEEEeecccccHHHHHHhccC-CCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE------------------
Confidence            9999999988999999998775 344458999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCC-----------CCCcchhHHHHHHHHHHHh
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLG-----------WSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~-----------~~~~~DiwslG~il~ell~  285 (399)
                             .|.+||+|||+|......+     .+.+||+-|||||.+....           .++++||||||||||+|+.
T Consensus       495 -------kG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvY  567 (677)
T KOG0596|consen  495 -------KGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVY  567 (677)
T ss_pred             -------eeeEEeeeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHh
Confidence                   5779999999998766554     3568999999999996432           5688999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |+.||....  ....++..+..+                   ...+.+|+..                         -..
T Consensus       568 gktPf~~~~--n~~aKl~aI~~P-------------------~~~Iefp~~~-------------------------~~~  601 (677)
T KOG0596|consen  568 GKTPFGQII--NQIAKLHAITDP-------------------NHEIEFPDIP-------------------------END  601 (677)
T ss_pred             cCCchHHHH--HHHHHHHhhcCC-------------------CccccccCCC-------------------------Cch
Confidence            999996422  122333222111                   0012222211                         012


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ++.++++.||+.||.+|||+.|||+|||++-
T Consensus       602 ~li~~mK~CL~rdPkkR~si~eLLqhpFl~~  632 (677)
T KOG0596|consen  602 ELIDVMKCCLARDPKKRWSIPELLQHPFLQI  632 (677)
T ss_pred             HHHHHHHHHHhcCcccCCCcHHHhcCccccc
Confidence            2789999999999999999999999999975

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3e-43  Score=321.46  Aligned_cols=249  Identities=28%  Similarity=0.425  Sum_probs=204.8

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh------hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      +.|++.+.||+|++|.||.|.+..+++.||+|.+.....      ....+..|+++++.+.      |+||+++++++..
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~   75 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQ------HERIVQYYGCLRD   75 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCC------CCCeeeeEEEEcc
Confidence            469999999999999999999999999999999864321      1234556777777664      6999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ++..++||||+ +++|.+++....  .+++..+..++.|++.||.|||+.||+|+||||+||+++               
T Consensus        76 ~~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---------------  138 (263)
T cd06625          76 DETLSIFMEYMPGGSVKDQLKAYG--ALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---------------  138 (263)
T ss_pred             CCeEEEEEEECCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---------------
Confidence            99999999999 899999998765  589999999999999999999999999999999999993               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                               .++.++|+|||.+.......      ....|+..|+|||++.+..++.++||||||+++|+|++|+.||..
T Consensus       139 ---------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~  209 (263)
T cd06625         139 ---------SAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAE  209 (263)
T ss_pred             ---------CCCCEEEeecccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccc
Confidence                     46679999999876432211      235678899999999999999999999999999999999999977


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....+......                                                ...+..++..+.+||.
T Consensus       210 ~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~  241 (263)
T cd06625         210 FEAMAAIFKIATQPTN------------------------------------------------PQLPSHVSPDARNFLR  241 (263)
T ss_pred             cchHHHHHHHhccCCC------------------------------------------------CCCCccCCHHHHHHHH
Confidence            6554433332211000                                                0112356778899999


Q ss_pred             HccccCCCCCCCHHHHhCCccc
Q 015867          373 GLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      +||..||.+|||+.++++||||
T Consensus       242 ~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         242 RTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             HHhhcCcccCCCHHHHhhCCCC
Confidence            9999999999999999999998

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=100.00  E-value=8.9e-43  Score=323.35  Aligned_cols=278  Identities=31%  Similarity=0.501  Sum_probs=214.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||.|++|.||+|.+..+++.||||.+.....  .......|+++++.+.      |+||+++++++.+.+..
T Consensus         5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~   78 (291)
T cd07844           5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLK------HANIVTLHDIIHTKKTL   78 (291)
T ss_pred             cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCC------CcceeeEEEEEecCCeE
Confidence            579999999999999999999988999999999864321  2234556888888875      58999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||++++|.+++..... .+++..++.++.|++.||.|||++||+|+||||+|||++                    
T Consensus        79 ~lv~e~~~~~L~~~~~~~~~-~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~--------------------  137 (291)
T cd07844          79 TLVFEYLDTDLKQYMDDCGG-GLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS--------------------  137 (291)
T ss_pred             EEEEecCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc--------------------
Confidence            99999997799999876543 689999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCC-cHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHE-NLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~-~~~~  298 (399)
                          .++.++|+|||++......   .....++..|+|||++.+ ..++.++||||+|+++|+|++|..||.... ..+.
T Consensus       138 ----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~  213 (291)
T cd07844         138 ----ERGELKLADFGLARAKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQ  213 (291)
T ss_pred             ----CCCCEEECccccccccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHH
Confidence                4667999999987653221   123356889999999876 458999999999999999999999998765 4556


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh--hHHHHHHHHccc
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR--STLTDLLHGLLR  376 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~li~~~L~  376 (399)
                      ...+.+..+.+....+.............     ++.  ......             ....+..+  .++.++|.+||+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~-------------~~~~~~~~~~~~~~~li~~~L~  273 (291)
T cd07844         214 LHKIFRVLGTPTEETWPGVSSNPEFKPYS-----FPF--YPPRPL-------------INHAPRLDRIPHGEELALKFLQ  273 (291)
T ss_pred             HHHHHHhcCCCChhhhhhhhhcccccccc-----ccc--cCChhH-------------HHhCcCCCCchhHHHHHHHHhc
Confidence            66666666666555554443221111000     000  000000             00011223  677899999999


Q ss_pred             cCCCCCCCHHHHhCCccc
Q 015867          377 YDPSERLTARQALNHPFF  394 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f  394 (399)
                      .||.+|||+.++++||||
T Consensus       274 ~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         274 YEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             cCcccccCHHHHhcCCCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=7.9e-43  Score=317.27  Aligned_cols=249  Identities=28%  Similarity=0.417  Sum_probs=207.8

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|.+.+.||+|++|.||+|.+..+++.|++|.+...   ......+..|+++++.+.      |+|++++++.+...+..
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~   74 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLD------SSYIIRYYESFLDKGKL   74 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcC------CCCeehheeeeccCCEE
Confidence            488999999999999999999999999999998642   234455666777777764      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.......++...+..++.|++.||.|||+.|++|+||||+||+++                   
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~-------------------  135 (256)
T cd08529          75 NIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD-------------------  135 (256)
T ss_pred             EEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe-------------------
Confidence            9999999 99999999876445799999999999999999999999999999999999994                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           .++.++|+|||++......   .....|++.|+|||++.+..++.++|+||||+++|+|++|..||...+..+..
T Consensus       136 -----~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~  210 (256)
T cd08529         136 -----AYDNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALI  210 (256)
T ss_pred             -----CCCCEEEcccccceeccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                 4567999999987653332   23457899999999999999999999999999999999999999877755444


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.....+                                                 .....++.++.++|.+||+.||
T Consensus       211 ~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~i~~~l~~~p  241 (256)
T cd08529         211 LKIIRGVFP-------------------------------------------------PVSQMYSQQLAQLIDQCLTKDY  241 (256)
T ss_pred             HHHHcCCCC-------------------------------------------------CCccccCHHHHHHHHHHccCCc
Confidence            433221100                                                 0112456778999999999999


Q ss_pred             CCCCCHHHHhCCccc
Q 015867          380 SERLTARQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~~ell~hp~f  394 (399)
                      ++||++.++++|||+
T Consensus       242 ~~Rp~~~~ll~~~~~  256 (256)
T cd08529         242 RQRPDTFQLLRNPSL  256 (256)
T ss_pred             ccCcCHHHHhhCCCC
Confidence            999999999999996

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=100.00  E-value=9.6e-43  Score=330.70  Aligned_cols=284  Identities=29%  Similarity=0.538  Sum_probs=225.6

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|++++.||+|+||.||++.+..+++.||||++...   ......+..|+++++.+.      |+||+++++.+..
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~   85 (343)
T cd07880          12 EVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMK------HENVIGLLDVFTP   85 (343)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcC------CCCccceeeeecC
Confidence            3567899999999999999999999999999999998542   222345667888888775      5899999998876


Q ss_pred             CC------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 RN------HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ~~------~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      ..      .+++||||++++|.+++...   .+++..+..++.||+.||+|||+.||+||||||+||+++          
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~----------  152 (343)
T cd07880          86 DLSLDRFHDFYLVMPFMGTDLGKLMKHE---KLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN----------  152 (343)
T ss_pred             CccccccceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc----------
Confidence            43      46999999999999988753   489999999999999999999999999999999999994          


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                    .++.++|+|||++...........+++.|+|||.+.+ ..++.++|+||||+++|++++|..||..
T Consensus       153 --------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~  218 (343)
T cd07880         153 --------------EDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKG  218 (343)
T ss_pred             --------------CCCCEEEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                          4667999999998876555556678999999999876 4688999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+.......+....+..+..+...........                 ........  .........+.++..+.++|.
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~--~~~~~~~~~~~~~~~~~~li~  279 (343)
T cd07880         219 HDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKN-----------------YVKKLPRF--RKKDFRSLLPNANPLAVNVLE  279 (343)
T ss_pred             CCHHHHHHHHHHhcCCCCHHHHHhhcchhHHH-----------------HHHhcccc--CcchHHHhccCCChHHHHHHH
Confidence            88888888888877777766655443211100                 00000000  000011223467788999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||+.||.+|||+.++++||||+...
T Consensus       280 ~~l~~dP~~R~t~~~~l~~~~~~~~~  305 (343)
T cd07880         280 KMLVLDAESRITAAEALAHPYFEEFH  305 (343)
T ss_pred             HHcCCChhhCCCHHHHhcCccHhhhc
Confidence            99999999999999999999998753

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=100.00  E-value=6.2e-43  Score=327.19  Aligned_cols=288  Identities=24%  Similarity=0.375  Sum_probs=210.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||+|+||.||++.+..++..+|+|.+...  ......+..|+++++.+.      |+||+++++.+..++..
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~   74 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECN------SPYIVGFYGAFYSDGEI   74 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEeeCCEE
Confidence            3699999999999999999999999999999998643  223345667888887775      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ++||||+ +++|.+++.+.+  .+++..+..++.|++.||.|||+ .+++|+||||+|||++                  
T Consensus        75 ~lv~ey~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~------------------  134 (308)
T cd06615          75 SICMEHMDGGSLDQVLKKAG--RIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN------------------  134 (308)
T ss_pred             EEEeeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe------------------
Confidence            9999999 899999998765  58999999999999999999998 5999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCC-CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDN-QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                            .++.++|+|||++.... .......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+......
T Consensus       135 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~  208 (308)
T cd06615         135 ------SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEA  208 (308)
T ss_pred             ------cCCcEEEccCCCcccccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHH
Confidence                  45679999999876532 22345678999999999988889999999999999999999999997665433222


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+.......+...   .        ........+................. ..........++.++.+||.+||..||+
T Consensus       209 ~~~~~~~~~~~~~---~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~  276 (308)
T cd06615         209 MFGRPVSEGEAKE---S--------HRPVSGHPPDSPRPMAIFELLDYIVN-EPPPKLPSGAFSDEFQDFVDKCLKKNPK  276 (308)
T ss_pred             hhcCccccccccC---C--------cccccCCCCCccchhhHHHHHHHHhc-CCCccCcCcccCHHHHHHHHHHccCChh
Confidence            2211110000000   0        00000000000000000000000000 0000111123677899999999999999


Q ss_pred             CCCCHHHHhCCccccCC
Q 015867          381 ERLTARQALNHPFFRNL  397 (399)
Q Consensus       381 ~R~t~~ell~hp~f~~~  397 (399)
                      +|||+.++++||||.+.
T Consensus       277 ~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         277 ERADLKELTKHPFIKRA  293 (308)
T ss_pred             hCcCHHHHhcChhhhhc
Confidence            99999999999999874

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-46  Score=326.71  Aligned_cols=251  Identities=27%  Similarity=0.454  Sum_probs=212.2

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      |.++++||+|+||.||+|.++.+|+.+|||.+... ........|+.|+++..      .+++|++|+.|-....+++||
T Consensus        35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~-sDLQEIIKEISIMQQC~------S~yVVKYYGSYFK~sDLWIVM  107 (502)
T KOG0574|consen   35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD-TDLQEIIKEISIMQQCK------SKYVVKYYGSYFKHSDLWIVM  107 (502)
T ss_pred             HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc-chHHHHHHHHHHHHHcC------CchhhhhhhhhccCCceEeeh
Confidence            78999999999999999999999999999998653 23355667888888765      489999999988888999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||| .|++.+.++.+. +.+++..+..+++..+.||+|||...-+|||||..|||++                       
T Consensus       108 EYCGAGSiSDI~R~R~-K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN-----------------------  163 (502)
T KOG0574|consen  108 EYCGAGSISDIMRARR-KPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN-----------------------  163 (502)
T ss_pred             hhcCCCcHHHHHHHhc-CCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc-----------------------
Confidence            999 789999987543 3799999999999999999999999999999999999994                       


Q ss_pred             CCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          227 PKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                       .++++||+|||.+......   .++..||+.|||||++..-.|+.++||||||++..||..|++||....+...+..|-
T Consensus       164 -T~G~AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIP  242 (502)
T KOG0574|consen  164 -TDGIAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIP  242 (502)
T ss_pred             -ccchhhhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEecc
Confidence             5677999999998764432   467889999999999999999999999999999999999999998766655443331


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .   .+|+.+                                            .-+...|.++.|||++||..+|++|.
T Consensus       243 T---~PPPTF--------------------------------------------~KPE~WS~~F~DFi~~CLiK~PE~R~  275 (502)
T KOG0574|consen  243 T---KPPPTF--------------------------------------------KKPEEWSSEFNDFIRSCLIKKPEERK  275 (502)
T ss_pred             C---CCCCCC--------------------------------------------CChHhhhhHHHHHHHHHhcCCHHHHH
Confidence            1   111111                                            11235578899999999999999999


Q ss_pred             CHHHHhCCccccCC
Q 015867          384 TARQALNHPFFRNL  397 (399)
Q Consensus       384 t~~ell~hp~f~~~  397 (399)
                      ||.+|++|||.++.
T Consensus       276 TA~~L~~H~FiknA  289 (502)
T KOG0574|consen  276 TALRLCEHTFIKNA  289 (502)
T ss_pred             HHHHHhhhhhhcCC
Confidence            99999999999874

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=100.00  E-value=2.2e-42  Score=319.60  Aligned_cols=278  Identities=33%  Similarity=0.590  Sum_probs=213.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++....   .....+..|+++++.+.      |+|++++++++.....
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~   74 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLK------HPNLVNLIEVFRRKRK   74 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCC------CCCEeeeeeEEeeCCE
Confidence            46999999999999999999999899999999886432   12344567888888775      5899999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|..++....  .+++..+..++.||+.||+|||++|++|+||||+||+++                  
T Consensus        75 ~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~------------------  134 (286)
T cd07847          75 LHLVFEYCDHTVLNELEKNPR--GVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT------------------  134 (286)
T ss_pred             EEEEEeccCccHHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc------------------
Confidence            99999999 666666655443  589999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                            .++.++|+|||++......   .....++..|+|||++.+ ..++.++|+||||+++|+|++|.+||.+.+..+
T Consensus       135 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~  208 (286)
T cd07847         135 ------KQGQIKLCDFGFARILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD  208 (286)
T ss_pred             ------CCCcEEECccccceecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH
Confidence                  4667999999988654332   234568899999999876 468899999999999999999999999888877


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+....+.............  .++ .......+....               . .....+.++..+.+||.+||+.
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~---------------~-~~~~~~~~~~~~~~li~~~l~~  269 (286)
T cd07847         209 QLYLIRKTLGDLIPRHQQIFSTN--QFF-KGLSIPEPETRE---------------P-LESKFPNISSPALSFLKGCLQM  269 (286)
T ss_pred             HHHHHHHHhCCCChHHhhhcccc--ccc-ccccCCCccccc---------------C-HHHHhccCCHHHHHHHHHHhcC
Confidence            77777766555443221111000  000 000001110000               0 0011234578899999999999


Q ss_pred             CCCCCCCHHHHhCCccc
Q 015867          378 DPSERLTARQALNHPFF  394 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f  394 (399)
                      ||++|||+.|++.||||
T Consensus       270 ~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         270 DPTERLSCEELLEHPYF  286 (286)
T ss_pred             CccccCCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-42  Score=321.95  Aligned_cols=280  Identities=35%  Similarity=0.642  Sum_probs=220.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.++..   ......+..|+++++.+.      |+||+++++.+...+.
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~   74 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLR------HENIVNLKEAFRRKGR   74 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcC------CCCeeehhheEEECCE
Confidence            3699999999999999999999999999999988642   223456777888888876      5899999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .++||||+++++.+.+.... ..+++..+..++.||+.||.|||++|++|+||+|+||++                    
T Consensus        75 ~~iv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~--------------------  133 (288)
T cd07833          75 LYLVFEYVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILV--------------------  133 (288)
T ss_pred             EEEEEecCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE--------------------
Confidence            99999999445544443332 258999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                          +.++.++|+|||.+......    .....++..|+|||++.+. .++.++|+||||+++|+|++|.+||.+.+..+
T Consensus       134 ----~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~  209 (288)
T cd07833         134 ----SESGVLKLCDFGFARALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID  209 (288)
T ss_pred             ----CCCCCEEEEeeecccccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                44677999999987664332    2346788999999999888 88999999999999999999999999888888


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      .+..+....+..+..............     ...++..             ..........+..++.++.+||.+||..
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~li~~~l~~  271 (288)
T cd07833         210 QLYLIQKCLGPLPPSHQELFSSNPRFA-----GVAFPEP-------------SQPESLERRYPGKVSSPALDFLKACLRM  271 (288)
T ss_pred             HHHHHHHHhCCCCHHHhhhcccCcccc-----ccccCCC-------------CCcHHHHHhcCCccchHHHHHHHHHhcc
Confidence            888888888777765544332111100     0001110             0001111123344588899999999999


Q ss_pred             CCCCCCCHHHHhCCccc
Q 015867          378 DPSERLTARQALNHPFF  394 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f  394 (399)
                      ||++|||++++++||||
T Consensus       272 ~p~~Rps~~~il~~~~f  288 (288)
T cd07833         272 DPKERLTCDELLQHPYF  288 (288)
T ss_pred             CchhcccHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=100.00  E-value=6.1e-43  Score=332.07  Aligned_cols=283  Identities=29%  Similarity=0.551  Sum_probs=224.3

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|++.+.||+|+||.||+|++..+++.||+|++...   .........|+.+++.+.      |+|++.+.+++..
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~   85 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMD------HENVIGLLDVFTP   85 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhcc------CCCHHHHHHHhhc
Confidence            3567899999999999999999999999999999998642   122344556888877775      5899999887766


Q ss_pred             CCe------EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 RNH------ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ~~~------~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      .+.      .++|+||++++|.+++...   .+++..+..++.||+.||+|||+.||+|+||||+||+++          
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~----------  152 (343)
T cd07851          86 ASSLEDFQDVYLVTHLMGADLNNIVKCQ---KLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN----------  152 (343)
T ss_pred             cccccccccEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC----------
Confidence            544      8999999999999998763   499999999999999999999999999999999999994          


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                    .++.++|+|||.+...........++..|+|||.+.+ ..++.++||||||+++|+|++|+.||.+
T Consensus       153 --------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~  218 (343)
T cd07851         153 --------------EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG  218 (343)
T ss_pred             --------------CCCCEEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence                          4667999999998776555556678999999999876 3688999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+.+..+....+.+++.++.+........+                 ....... .... .......++..+.+||.
T Consensus       219 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~-~~~~-~~~~~~~~s~~l~dli~  279 (343)
T cd07851         219 SDHIDQLKRIMNLVGTPDEELLQKISSESARNY-----------------IQSLPQM-PKKD-FKEVFSGANPLAIDLLE  279 (343)
T ss_pred             CChHHHHHHHHHhcCCCCHHHHhhccchhHHHH-----------------HHhcccc-CCCC-HHHHhccCCHHHHHHHH
Confidence            888888888888877777766554421111000                 0000000 0000 01112345788999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||..||.+|||+.+|++||||++.
T Consensus       280 ~~l~~~P~~Rpt~~ell~h~~~~~~  304 (343)
T cd07851         280 KMLVLDPDKRITAAEALAHPYLAEY  304 (343)
T ss_pred             HhCCCChhhCCCHHHHhcCCCcccc
Confidence            9999999999999999999999875

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.6e-44  Score=342.07  Aligned_cols=248  Identities=26%  Similarity=0.415  Sum_probs=207.6

Q ss_pred             eeccccceEEEEEEEccCCeEEEEEEEec-chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-
Q 015867           73 KMGEGTFGRVLECWDRQTQERVAIKVVRS-IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-  150 (399)
Q Consensus        73 ~lG~G~~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-  150 (399)
                      .||+|.||+||-|++..+...+|||-+.. .......+..|+.+-+.|+|      .|||+.++.+...+++-+.||.+ 
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrH------kNIVrYLGs~senGf~kIFMEqVP  655 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRH------KNIVRYLGSVSENGFFKIFMEQVP  655 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhh------HhHHHHhhccCCCCeEEEEeecCC
Confidence            59999999999999999999999998854 23344556778888888875      89999999999999999999999 


Q ss_pred             CCCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          151 GPSLFDFLKRNKYCPF--PVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       151 ~~~L~~~l~~~~~~~~--~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      ||+|.++++...+ ++  .+..+..|.+||++||.|||++.|||||||-+||||+                       ..
T Consensus       656 GGSLSsLLrskWG-PlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvN-----------------------Ty  711 (1226)
T KOG4279|consen  656 GGSLSSLLRSKWG-PLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVN-----------------------TY  711 (1226)
T ss_pred             CCcHHHHHHhccC-CCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEe-----------------------ec
Confidence            9999999987644 55  7889999999999999999999999999999999995                       45


Q ss_pred             CCceEEeecCCccc---CCCCCcccccCCCccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHH
Q 015867          229 SSAIKLIDFGSTAF---DNQNHSSIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME  303 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~  303 (399)
                      .|.+||+|||.++.   .+..+.++.||..|||||++...  +|+.++|||||||++.||.||++||...........-.
T Consensus       712 SGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV  791 (1226)
T KOG4279|consen  712 SGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV  791 (1226)
T ss_pred             cceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh
Confidence            78999999998876   55667889999999999999865  69999999999999999999999997644322211111


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....                     +.                          ..+..++.+++.||.+|+.+||.+||
T Consensus       792 GmyKv---------------------HP--------------------------~iPeelsaeak~FilrcFepd~~~R~  824 (1226)
T KOG4279|consen  792 GMYKV---------------------HP--------------------------PIPEELSAEAKNFILRCFEPDPCDRP  824 (1226)
T ss_pred             cceec---------------------CC--------------------------CCcHHHHHHHHHHHHHHcCCCcccCc
Confidence            11100                     11                          12246788899999999999999999


Q ss_pred             CHHHHhCCccccCC
Q 015867          384 TARQALNHPFFRNL  397 (399)
Q Consensus       384 t~~ell~hp~f~~~  397 (399)
                      +|.++|+.||++.-
T Consensus       825 sA~~LL~DpFlq~~  838 (1226)
T KOG4279|consen  825 SAKDLLQDPFLQHN  838 (1226)
T ss_pred             cHHHhccCcccccC
Confidence            99999999999854

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=100.00  E-value=2.4e-42  Score=319.12  Aligned_cols=277  Identities=33%  Similarity=0.536  Sum_probs=220.0

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +|++.++||.|++|.||+|.+..+++.||||.++...  ........|+++++.+.      |+|++++++++.+.+..+
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~~   74 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELK------HENIVRLHDVIHTENKLM   74 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhc------CCCEeeeeeeEeeCCcEE
Confidence            4899999999999999999999999999999986532  22345567888888875      589999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKLGPSLFDFLKRNK-YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+.++|.+++.... ...+++..+..++.|++.||.|||++|++|+||||+||+++                    
T Consensus        75 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~--------------------  134 (284)
T cd07836          75 LVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN--------------------  134 (284)
T ss_pred             EEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC--------------------
Confidence            999999779999887654 23589999999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                          .++.++|+|||++......   .....++..|++||++.+. .++.++|+||||+++|+|++|..||.+.+..+..
T Consensus       135 ----~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~  210 (284)
T cd07836         135 ----KRGELKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQL  210 (284)
T ss_pred             ----CCCcEEEeecchhhhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHH
Confidence                4667999999987643221   2344678899999998764 5789999999999999999999999998888888


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      .++......+....+...... ..+..     ..|...  ....             ....+.++..+.++|.+||+.||
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~--~~~~-------------~~~~~~~~~~~~~~i~~~l~~~p  269 (284)
T cd07836         211 LKIFRIMGTPTESTWPGISQL-PEYKP-----TFPRYP--PQDL-------------QQLFPHADPLGIDLLHRLLQLNP  269 (284)
T ss_pred             HHHHHHhCCCChhhHHHHhcC-chhcc-----cccCCC--hHHH-------------HHHhhhcCcHHHHHHHHHhcCCc
Confidence            888877776666655544311 11110     011000  0000             11123457889999999999999


Q ss_pred             CCCCCHHHHhCCccc
Q 015867          380 SERLTARQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~~ell~hp~f  394 (399)
                      .+|||+.++++||||
T Consensus       270 ~~R~~~~~~l~~~~f  284 (284)
T cd07836         270 ELRISAHDALQHPWF  284 (284)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.2e-45  Score=344.29  Aligned_cols=254  Identities=26%  Similarity=0.468  Sum_probs=215.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc-hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI-RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +.|.|+..||.|+||.||+|.++.++-.-|-|++... ......+..|++||..+.      ||+||++++.|-.++.++
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~Cd------HP~ivkLl~ayy~enkLw  105 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECD------HPVIVKLLSAYYFENKLW  105 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCC------ChHHHHHHHHHhccCceE
Confidence            4589999999999999999999989888888988542 334566778999988875      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++.||| ||-...++-.-+. .+++.++..+++|++.||.|||+++|||||||..|||++                    
T Consensus       106 iliEFC~GGAVDaimlEL~r-~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~T--------------------  164 (1187)
T KOG0579|consen  106 ILIEFCGGGAVDAIMLELGR-VLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLT--------------------  164 (1187)
T ss_pred             EEEeecCCchHhHHHHHhcc-ccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEE--------------------
Confidence            999999 7777666654433 799999999999999999999999999999999999995                    


Q ss_pred             ccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          224 RCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                          .+|.++|+|||.+....   ....++.|||+|||||+..     ..+|+.++||||||++|.||..+.+|-..-+.
T Consensus       165 ----ldGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp  240 (1187)
T KOG0579|consen  165 ----LDGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP  240 (1187)
T ss_pred             ----ecCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch
Confidence                46679999999875432   2346789999999999874     56899999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      +.++.+|.+...+.  -                                             ..+...+..|.||+.+||
T Consensus       241 MRVllKiaKSePPT--L---------------------------------------------lqPS~Ws~~F~DfLk~cL  273 (1187)
T KOG0579|consen  241 MRVLLKIAKSEPPT--L---------------------------------------------LQPSHWSRSFSDFLKRCL  273 (1187)
T ss_pred             HHHHHHHhhcCCCc--c---------------------------------------------cCcchhhhHHHHHHHHHH
Confidence            99888887643221  1                                             112344677899999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCC
Q 015867          376 RYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ..||..||++++||+||||+++
T Consensus       274 ~Knp~~Rp~aaqll~Hpfv~~~  295 (1187)
T KOG0579|consen  274 VKNPRNRPPAAQLLKHPFVQNA  295 (1187)
T ss_pred             hcCCccCCCHHHHhhCcccccC
Confidence            9999999999999999999976

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=7.4e-43  Score=330.75  Aligned_cols=283  Identities=30%  Similarity=0.532  Sum_probs=219.9

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +..+|.+.+.||+|+||+||+|++..+++.||||.+...   .........|+.+++.+.      |+||+++++++...
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~ni~~~~~~~~~~   76 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLD------HENVIAIKDIMPPP   76 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcC------CCCccchHHheecc
Confidence            356799999999999999999999999999999998642   122334556777777764      59999999877643


Q ss_pred             -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          141 -----NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       141 -----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                           ...|+||||++++|.+++...+  .+++..+..++.|++.||.|||++|++|+||||+||+++            
T Consensus        77 ~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~------------  142 (337)
T cd07858          77 HREAFNDVYIVYELMDTDLHQIIRSSQ--TLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN------------  142 (337)
T ss_pred             cccccCcEEEEEeCCCCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc------------
Confidence                 3589999999889999998765  599999999999999999999999999999999999993            


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                  .++.++|+|||++......   .....++..|+|||++.+ ..++.++|+|||||++|+|++|++||.
T Consensus       143 ------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~  210 (337)
T cd07858         143 ------------ANCDLKICDFGLARTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFP  210 (337)
T ss_pred             ------------CCCCEEECcCccccccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCC
Confidence                        4667999999988754322   234568899999999875 468999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhh-hhccchhhhhHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM-VSLHVDRARSTLTDL  370 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l  370 (399)
                      +.+.......+....+.++...+.......                 .....   ......... .....+.++.++.+|
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l  270 (337)
T cd07858         211 GKDYVHQLKLITELLGSPSEEDLGFIRNEK-----------------ARRYI---RSLPYTPRQSFARLFPHANPLAIDL  270 (337)
T ss_pred             CCChHHHHHHHHHHhCCCChHHhhhcCchh-----------------hhHHH---HhcCcccccCHHHHcccCCHHHHHH
Confidence            888778888888777766654432111000                 00000   000000000 011224678889999


Q ss_pred             HHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          371 LHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      |.+||+.||.+|||++++++||||+.+.
T Consensus       271 i~~~l~~~P~~Rps~~ell~h~~~~~~~  298 (337)
T cd07858         271 LEKMLVFDPSKRITVEEALAHPYLASLH  298 (337)
T ss_pred             HHHHhcCChhhccCHHHHHcCcchhhhc
Confidence            9999999999999999999999998764

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.9e-43  Score=324.73  Aligned_cols=255  Identities=28%  Similarity=0.465  Sum_probs=208.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ++|++.+.||.|+||.||++.+..+++.||+|++.... .....+..|+++++.+.      |+|++++++.+..++..+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~   78 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECK------HPNIVGLYEAYFYENKLW   78 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCC------CCceeEEEEEEecCCeEE
Confidence            46999999999999999999998899999999986532 23345667888888775      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++...+. .+++..+..++.|++.||.|||++||+|+||||+||++                     
T Consensus        79 lv~e~~~~~~L~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili---------------------  136 (280)
T cd06611          79 ILIEFCDGGALDSIMLELER-GLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILL---------------------  136 (280)
T ss_pred             EEeeccCCCcHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE---------------------
Confidence            999999 8899999876542 59999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                         +.++.++|+|||.+.....   ......|++.|+|||++.     ...++.++|+||||+++|+|++|..||...+.
T Consensus       137 ---~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~  213 (280)
T cd06611         137 ---TLDGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP  213 (280)
T ss_pred             ---CCCCCEEEccCccchhhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH
Confidence               4467799999998754322   223457899999999985     34578899999999999999999999987665


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      ......+.....  +.                                             ...+..++.++.+||.+||
T Consensus       214 ~~~~~~~~~~~~--~~---------------------------------------------~~~~~~~~~~~~~li~~~l  246 (280)
T cd06611         214 MRVLLKILKSEP--PT---------------------------------------------LDQPSKWSSSFNDFLKSCL  246 (280)
T ss_pred             HHHHHHHhcCCC--CC---------------------------------------------cCCcccCCHHHHHHHHHHh
Confidence            554443322110  00                                             0011245677899999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCCC
Q 015867          376 RYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +.||.+||++.++++||||++..
T Consensus       247 ~~~p~~Rps~~~il~~~~~~~~~  269 (280)
T cd06611         247 VKDPDDRPTAAELLKHPFVSDQS  269 (280)
T ss_pred             ccChhhCcCHHHHhcChhhcccc
Confidence            99999999999999999998853

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=4.2e-43  Score=332.62  Aligned_cols=248  Identities=21%  Similarity=0.336  Sum_probs=194.5

Q ss_pred             CCEEEEeeeccccceEEEEEEE-----ccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWD-----RQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||+|+||.||+|.+     ..+++.||||+++...  .....+..|+.++..+.     .|+||+++++++.
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~~~~   81 (338)
T cd05102           7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIG-----NHLNVVNLLGACT   81 (338)
T ss_pred             hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhc-----cCcceeeEEeEec
Confidence            5799999999999999999974     2446789999986432  23355777888888874     3699999999877


Q ss_pred             cC-CeEEEEEccC-CCCHHHHHHhcCC-----------------------------------------------------
Q 015867          139 YR-NHICIVFEKL-GPSLFDFLKRNKY-----------------------------------------------------  163 (399)
Q Consensus       139 ~~-~~~~lv~e~~-~~~L~~~l~~~~~-----------------------------------------------------  163 (399)
                      .. +.+++||||+ +|+|.+++.....                                                     
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T cd05102          82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ  161 (338)
T ss_pred             CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence            64 5689999999 9999999975321                                                     


Q ss_pred             -------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEee
Q 015867          164 -------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID  236 (399)
Q Consensus       164 -------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~D  236 (399)
                             ..+++..+..++.||+.||+|||++||+||||||+|||++                        .++.+||+|
T Consensus       162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~------------------------~~~~~kl~D  217 (338)
T cd05102         162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS------------------------ENNVVKICD  217 (338)
T ss_pred             hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc------------------------CCCcEEEee
Confidence                   2477888899999999999999999999999999999994                        466799999


Q ss_pred             cCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCC
Q 015867          237 FGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLP  310 (399)
Q Consensus       237 fg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p  310 (399)
                      ||++......     .....++..|+|||++.+..++.++|||||||++|||++ |..||.+....+..........   
T Consensus       218 fG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~---  294 (338)
T cd05102         218 FGLARDIYKDPDYVRKGSARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGT---  294 (338)
T ss_pred             cccccccccCcchhcccCCCCCccccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCC---
Confidence            9988653221     123346778999999999999999999999999999997 9999987554332222111000   


Q ss_pred             HHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          311 EHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                                                                   ....+..++.++.+||.+||+.||.+|||+.|+++
T Consensus       295 ---------------------------------------------~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~  329 (338)
T cd05102         295 ---------------------------------------------RMRAPENATPEIYRIMLACWQGDPKERPTFSALVE  329 (338)
T ss_pred             ---------------------------------------------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence                                                         00112345678899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=100.00  E-value=6.7e-43  Score=322.33  Aligned_cols=256  Identities=23%  Similarity=0.388  Sum_probs=201.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++...  ......+..|+++++.+.      |+||+++++.+...+..
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~   74 (279)
T cd06619           1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCD------SPYIIGFYGAFFVENRI   74 (279)
T ss_pred             CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCC------CCCeeeEEEEEEECCEE
Confidence            3688999999999999999999999999999998643  223345667888777764      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|..+.      .+++..+..++.|++.||.|||+.||+|+||||+|||+                    
T Consensus        75 ~lv~e~~~~~~l~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill--------------------  128 (279)
T cd06619          75 SICTEFMDGGSLDVYR------KIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLV--------------------  128 (279)
T ss_pred             EEEEecCCCCChHHhh------cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEE--------------------
Confidence            9999999 88886542      47889999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCC-CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDN-QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM  301 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~  301 (399)
                          +.++.++|+|||++.... ......+||..|+|||++.+..++.++|+||||+++|+|++|..||......+... 
T Consensus       129 ----~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~-  203 (279)
T cd06619         129 ----NTRGQVKLCDFGVSTQLVNSIAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSL-  203 (279)
T ss_pred             ----CCCCCEEEeeCCcceecccccccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhccccccc-
Confidence                446779999999886533 23345689999999999999999999999999999999999999996522111000 


Q ss_pred             HHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCC
Q 015867          302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE  381 (399)
Q Consensus       302 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  381 (399)
                             .+........        ....                         ........+.++.+||.+||+.||.+
T Consensus       204 -------~~~~~~~~~~--------~~~~-------------------------~~~~~~~~~~~~~~li~~~l~~~P~~  243 (279)
T cd06619         204 -------MPLQLLQCIV--------DEDP-------------------------PVLPVGQFSEKFVHFITQCMRKQPKE  243 (279)
T ss_pred             -------chHHHHHHHh--------ccCC-------------------------CCCCCCcCCHHHHHHHHHHhhCChhh
Confidence                   0000000000        0000                         00011235677899999999999999


Q ss_pred             CCCHHHHhCCccccCCC
Q 015867          382 RLTARQALNHPFFRNLN  398 (399)
Q Consensus       382 R~t~~ell~hp~f~~~~  398 (399)
                      ||+++|+++||||...+
T Consensus       244 Rp~~~eil~~~~~~~~~  260 (279)
T cd06619         244 RPAPENLMDHPFIVQYN  260 (279)
T ss_pred             CCCHHHHhcCccccccc
Confidence            99999999999998764

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=100.00  E-value=1.3e-42  Score=323.18  Aligned_cols=253  Identities=26%  Similarity=0.435  Sum_probs=206.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..+|++.+.||+|+||.||++.+..+++.||+|.+.... .....+..|+.+++.+.      |+|++++++.+......
T Consensus        19 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~------h~~v~~~~~~~~~~~~~   92 (296)
T cd06654          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK------NPNIVNYLDSYLVGDEL   92 (296)
T ss_pred             ccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCC------CCCEeeEEEEEEeCCEE
Confidence            357999999999999999999998999999999986532 22345666777777764      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||||+ +++|.+++...   .++...+..++.|++.||+|||+.||+|+||||+|||++                   
T Consensus        93 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~-------------------  150 (296)
T cd06654          93 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-------------------  150 (296)
T ss_pred             EEeecccCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc-------------------
Confidence            9999999 99999998754   389999999999999999999999999999999999993                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           .++.++|+|||.+......   .....|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+.....
T Consensus       151 -----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~  225 (296)
T cd06654         151 -----MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL  225 (296)
T ss_pred             -----CCCCEEECccccchhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhH
Confidence                 4667999999987653222   23457899999999999988999999999999999999999999876553332


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+... .. +                                             ....+..++..+.+||.+||..||
T Consensus       226 ~~~~~~-~~-~---------------------------------------------~~~~~~~~~~~l~~li~~~l~~~p  258 (296)
T cd06654         226 YLIATN-GT-P---------------------------------------------ELQNPEKLSAIFRDFLNRCLDMDV  258 (296)
T ss_pred             HHHhcC-CC-C---------------------------------------------CCCCccccCHHHHHHHHHHCcCCc
Confidence            221110 00 0                                             001113456778999999999999


Q ss_pred             CCCCCHHHHhCCccccCC
Q 015867          380 SERLTARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~  397 (399)
                      .+|||+.++++||||...
T Consensus       259 ~~Rpt~~eil~~~~~~~~  276 (296)
T cd06654         259 EKRGSAKELLQHQFLKIA  276 (296)
T ss_pred             ccCcCHHHHhhChhhhcc
Confidence            999999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>PHA03210 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=3e-43  Score=349.14  Aligned_cols=292  Identities=21%  Similarity=0.293  Sum_probs=200.6

Q ss_pred             ccCCccCCCEEEEeeeccccceEEEEEEEccC-CeEEEEE------------------EEecchhhhHHHHHHHHHHHHh
Q 015867           59 NLGENLTPRYKILSKMGEGTFGRVLECWDRQT-QERVAIK------------------VVRSIRKYRDAAMIEIDVLQHL  119 (399)
Q Consensus        59 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vaiK------------------~~~~~~~~~~~~~~e~~~l~~l  119 (399)
                      ..+..+.++|++++.||+|+||+||+|..+.. +..+++|                  .+.........+..|+.+++.+
T Consensus       141 ~~~~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l  220 (501)
T PHA03210        141 KHDDEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRL  220 (501)
T ss_pred             ccchhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhC
Confidence            33455667899999999999999999875432 2222222                  1112222334566788888877


Q ss_pred             hhcCCCCCcceeeeceeeccCCeEEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 015867          120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNK---YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK  196 (399)
Q Consensus       120 ~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dik  196 (399)
                      .      |+||+++++++...+..|+|+++++++|.+++....   ........++.|+.||+.||+|||++||||||||
T Consensus       221 ~------HpnIv~l~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLK  294 (501)
T PHA03210        221 N------HENILKIEEILRSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIK  294 (501)
T ss_pred             C------CCCcCcEeEEEEECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCC
Confidence            5      599999999999999999999999889988876532   1123456788899999999999999999999999


Q ss_pred             CCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcch
Q 015867          197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCD  272 (399)
Q Consensus       197 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~D  272 (399)
                      |+|||++                        .++.+||+|||++......    ....+||..|+|||++.+..++.++|
T Consensus       295 P~NILl~------------------------~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  350 (501)
T PHA03210        295 LENIFLN------------------------CDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITD  350 (501)
T ss_pred             HHHEEEC------------------------CCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHH
Confidence            9999993                        4667999999998754322    23467999999999999999999999


Q ss_pred             hHHHHHHHHHHHhCCCC-CCCC--CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhh
Q 015867          273 MWSVGCILVELCTGEAL-FQTH--ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL  349 (399)
Q Consensus       273 iwslG~il~ell~g~~P-f~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  349 (399)
                      ||||||++|||++|..+ |...  .....+..+.......+..+.... .....++.   ...+....            
T Consensus       351 iwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~i~---~~~~~~~~------------  414 (501)
T PHA03210        351 IWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPP-CKLFDYID---SAEIDHAG------------  414 (501)
T ss_pred             HHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcH-HHHHHHhh---hhhcccCc------------
Confidence            99999999999998754 4332  233344444333322221110000 00000000   00000000            


Q ss_pred             hhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ..+..  ......++.++.++|.+||+.||.+|||+.|+|+||||.+..
T Consensus       415 ~~~~~--~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        415 HSVPP--LIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             cchhh--HHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence            00000  000113456788999999999999999999999999998753

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.5e-42  Score=319.96  Aligned_cols=250  Identities=27%  Similarity=0.453  Sum_probs=195.6

Q ss_pred             eeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEc
Q 015867           73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE  148 (399)
Q Consensus        73 ~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e  148 (399)
                      .||+|+||.||++.+..+++.||+|.+.....    .......|..+++.+.   ...|++++.+++.+...+..++|||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~~~~~~~~~~~~lv~e   77 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS---TGDCPFIVCMTYAFHTPDKLCFILD   77 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHh---hCCCCcEeEEEEEEecCCeEEEEEe
Confidence            48999999999999999999999999864321    1122333444444433   2357999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCC
Q 015867          149 KL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP  227 (399)
Q Consensus       149 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~  227 (399)
                      |+ +++|.+++...+  .+++..+..++.|++.||+|||++||+|+||||+|||+                        +
T Consensus        78 ~~~~~~L~~~i~~~~--~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~------------------------~  131 (279)
T cd05633          78 LMNGGDLHYHLSQHG--VFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL------------------------D  131 (279)
T ss_pred             cCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEE------------------------C
Confidence            99 999999998765  59999999999999999999999999999999999999                        3


Q ss_pred             CCCceEEeecCCcccCCC-CCcccccCCCccchhhhh-CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Q 015867          228 KSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA  305 (399)
Q Consensus       228 ~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~  305 (399)
                      .++.++|+|||++..... ......||..|+|||.+. +..++.++|+||+||++|+|++|..||........ ..+...
T Consensus       132 ~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~-~~~~~~  210 (279)
T cd05633         132 EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK-HEIDRM  210 (279)
T ss_pred             CCCCEEEccCCcceeccccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCH-HHHHHH
Confidence            466799999998764322 223457899999999986 45689999999999999999999999975432111 111111


Q ss_pred             hCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC--
Q 015867          306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL--  383 (399)
Q Consensus       306 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~--  383 (399)
                      ....                                              ....++.++.++.+||.+||+.||.+|+  
T Consensus       211 ~~~~----------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~  244 (279)
T cd05633         211 TLTV----------------------------------------------NVELPDSFSPELKSLLEGLLQRDVSKRLGC  244 (279)
T ss_pred             hhcC----------------------------------------------CcCCccccCHHHHHHHHHHhcCCHHHhcCC
Confidence            0000                                              0011235677889999999999999999  


Q ss_pred             ---CHHHHhCCccccCCC
Q 015867          384 ---TARQALNHPFFRNLN  398 (399)
Q Consensus       384 ---t~~ell~hp~f~~~~  398 (399)
                         |++|+++||||++++
T Consensus       245 ~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         245 LGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             CCCCHHHHHhCccccCCC
Confidence               699999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.6e-42  Score=329.10  Aligned_cols=281  Identities=30%  Similarity=0.524  Sum_probs=220.9

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +..+|.+.+.||+|+||.||+|.+..+|+.||||++....   .....+..|+.+++.+.      |+||+++++++...
T Consensus        13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~~~~~~~   86 (342)
T cd07879          13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQ------HENVIGLLDVFTSA   86 (342)
T ss_pred             cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcC------CCCccchhheeccc
Confidence            4568999999999999999999998899999999986421   22234566778877765      58999999988654


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          141 ------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       141 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                            ..+++||||+..+|.+++.    ..+++..+..++.|++.||+|||++||+||||||+||++            
T Consensus        87 ~~~~~~~~~~lv~e~~~~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll------------  150 (342)
T cd07879          87 VSGDEFQDFYLVMPYMQTDLQKIMG----HPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAV------------  150 (342)
T ss_pred             ccCCCCceEEEEecccccCHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE------------
Confidence                  3569999999778877653    148999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                  +.++.++|+|||++...........++..|+|||++.+ ..++.++|+|||||++|+|++|+.||.+.
T Consensus       151 ------------~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~  218 (342)
T cd07879         151 ------------NEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  218 (342)
T ss_pred             ------------CCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCC
Confidence                        34677999999998765555555678999999999876 46899999999999999999999999988


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +....+..+....+..++.+...........+.......++                   .......+.++.++.+||.+
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~li~~  279 (342)
T cd07879         219 DYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPR-------------------KDFSTLFPKASPQAVDLLEK  279 (342)
T ss_pred             CHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCccc-------------------chHHHHhcCCCHHHHHHHHH
Confidence            88888888888777777666555432221111100000000                   00011123567788999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||+.||.+|||+++++.||||+++
T Consensus       280 ~l~~dP~~R~~~~e~l~h~~f~~~  303 (342)
T cd07879         280 MLELDVDKRLTATEALEHPYFDSF  303 (342)
T ss_pred             HcCCChhhCcCHHHHhcCcchhhc
Confidence            999999999999999999999876

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.8e-43  Score=320.89  Aligned_cols=252  Identities=28%  Similarity=0.439  Sum_probs=209.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||.|+||.||+|.+..+++.||+|.+....  .....+..|+++++.+.      |+|++++++++.++...
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~   74 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCR------SPYITKYYGSFLKGSKL   74 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcC------CCCeeeeeEEEEECCeE
Confidence            46899999999999999999999999999999986532  22345667778877775      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++|+||+ +++|.+++...   .+++..+..++.|++.||.|||+++++|+||+|+||++                    
T Consensus        75 ~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i--------------------  131 (274)
T cd06609          75 WIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILL--------------------  131 (274)
T ss_pred             EEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE--------------------
Confidence            9999999 89999999865   58999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                          +.++.++|+|||++......   .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.....
T Consensus       132 ----~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~  207 (274)
T cd06609         132 ----SEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVL  207 (274)
T ss_pred             ----CCCCCEEEcccccceeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHH
Confidence                44677999999988664332   34557889999999999988999999999999999999999999876654443


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.....+.                       .+                         ...++.++.++|.+||..||
T Consensus       208 ~~~~~~~~~~-----------------------~~-------------------------~~~~~~~~~~~l~~~l~~~p  239 (274)
T cd06609         208 FLIPKNNPPS-----------------------LE-------------------------GNKFSKPFKDFVSLCLNKDP  239 (274)
T ss_pred             HHhhhcCCCC-----------------------Cc-------------------------ccccCHHHHHHHHHHhhCCh
Confidence            3332211000                       00                         01156778999999999999


Q ss_pred             CCCCCHHHHhCCccccCCC
Q 015867          380 SERLTARQALNHPFFRNLN  398 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~~  398 (399)
                      .+|||++++++||||++..
T Consensus       240 ~~Rpt~~~il~~~~~~~~~  258 (274)
T cd06609         240 KERPSAKELLKHKFIKKAK  258 (274)
T ss_pred             hhCcCHHHHhhChhhcCCC
Confidence            9999999999999998753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=100.00  E-value=1.9e-42  Score=320.24  Aligned_cols=262  Identities=24%  Similarity=0.407  Sum_probs=206.5

Q ss_pred             eeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        57 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      .+.......++|++.+.||+|+||.||+|.+..+++.+|+|++.........+..|..+++.+.     +|+|+++++++
T Consensus         9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~   83 (286)
T cd06638           9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALS-----DHPNVVKFYGM   83 (286)
T ss_pred             EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHh-----cCCCeeeeeee
Confidence            3444455677899999999999999999999999999999998654444456677888888875     36999999998


Q ss_pred             ec-----cCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          137 FD-----YRNHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       137 ~~-----~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      +.     .++..++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.+|+||||||+||+++     
T Consensus        84 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~-----  158 (286)
T cd06638          84 YYKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT-----  158 (286)
T ss_pred             eeecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC-----
Confidence            73     456899999999 99999988632  223589999999999999999999999999999999999994     


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhC-----CCCCCcchhHHHHHHH
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCIL  280 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il  280 (399)
                                         .++.++|+|||++.....   ......|+..|+|||++..     ..++.++|+|||||++
T Consensus       159 -------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~  219 (286)
T cd06638         159 -------------------TEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITA  219 (286)
T ss_pred             -------------------CCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHH
Confidence                               456699999998765322   2234578999999999853     4578999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccc
Q 015867          281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV  360 (399)
Q Consensus       281 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (399)
                      |+|++|..||........+..+....  .+                                             ....+
T Consensus       220 ~el~~g~~p~~~~~~~~~~~~~~~~~--~~---------------------------------------------~~~~~  252 (286)
T cd06638         220 IELGDGDPPLADLHPMRALFKIPRNP--PP---------------------------------------------TLHQP  252 (286)
T ss_pred             HHHhcCCCCCCCCchhHHHhhccccC--CC---------------------------------------------cccCC
Confidence            99999999997655433322211100  00                                             00011


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       361 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ..++.++.+||.+||+.||.+|||+.|+++|+||
T Consensus       253 ~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         253 ELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            2345678999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=100.00  E-value=2.4e-42  Score=323.17  Aligned_cols=280  Identities=29%  Similarity=0.512  Sum_probs=213.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC--
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR--  140 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~--  140 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||||.+....   ........|+++++.+.      |+||+++++++...  
T Consensus        12 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~   85 (310)
T cd07865          12 SKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLK------HENVVNLIEICRTKAT   85 (310)
T ss_pred             hheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCC------CCCccceEEEEecccc
Confidence            46999999999999999999999999999999986422   12233456778887775      58999999887654  


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          141 ------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       141 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                            ...++||||++++|.+++..... .+++..+..++.||+.||+|||++|++|+||||+||++            
T Consensus        86 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~------------  152 (310)
T cd07865          86 PYNRYKGSFYLVFEFCEHDLAGLLSNKNV-KFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILI------------  152 (310)
T ss_pred             cccCCCceEEEEEcCCCcCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEE------------
Confidence                  35699999998899988876532 58999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTG  286 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g  286 (399)
                                  +.++.++|+|||++......       .....++..|+|||.+.+. .++.++|+||||+++|+|++|
T Consensus       153 ------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~  220 (310)
T cd07865         153 ------------TKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTR  220 (310)
T ss_pred             ------------CCCCcEEECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhC
Confidence                        45678999999987653221       1234578899999998765 478999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       287 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      .+||.+.+.......+....+.++..+++.......  +.   ....|........             ........+..
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~-------------~~l~~~~~~~~  282 (310)
T cd07865         221 SPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLEL--FK---KMELPQGQKRKVK-------------ERLKPYVKDPH  282 (310)
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhh--hh---hccCCCccchhhH-------------HhcccccCCHH
Confidence            999999888888888888888777765443311100  00   0001110000000             00011123567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      +.+||.+||..||.+|||++|+++||||
T Consensus       283 ~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         283 ALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             HHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence            7899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=100.00  E-value=7.2e-43  Score=324.22  Aligned_cols=256  Identities=26%  Similarity=0.461  Sum_probs=206.1

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      .+.|+++++||.|+||.||+|.+..+++.|++|.+.... .....+..|+.+++.+.      |+|++++++.+..++..
T Consensus        11 ~~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~   84 (292)
T cd06644          11 NEVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCN------HPYIVKLLGAFYWDGKL   84 (292)
T ss_pred             chhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCC------CCcEeeeEEEEEeCCeE
Confidence            356999999999999999999999999999999986532 22344566777777664      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|..++.+... .+++..+..++.|++.+|.|||+.|++|+||||+||+++                   
T Consensus        85 ~lv~e~~~~~~l~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~-------------------  144 (292)
T cd06644          85 WIMIEFCPGGAVDAIMLELDR-GLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT-------------------  144 (292)
T ss_pred             EEEEecCCCCcHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc-------------------
Confidence            9999999 8899888765432 589999999999999999999999999999999999993                   


Q ss_pred             cccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                           .++.++|+|||++.....   ......++..|+|||++.     ...++.++|+|||||++|+|++|..||...+
T Consensus       145 -----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~  219 (292)
T cd06644         145 -----LDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN  219 (292)
T ss_pred             -----CCCCEEEccCccceeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCcccc
Confidence                 466799999998764322   223456889999999985     3457889999999999999999999998766


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ......++.....  +.                                             ...+..++.++.+||.+|
T Consensus       220 ~~~~~~~~~~~~~--~~---------------------------------------------~~~~~~~~~~~~~li~~~  252 (292)
T cd06644         220 PMRVLLKIAKSEP--PT---------------------------------------------LSQPSKWSMEFRDFLKTA  252 (292)
T ss_pred             HHHHHHHHhcCCC--cc---------------------------------------------CCCCcccCHHHHHHHHHH
Confidence            5444333321100  00                                             001124566789999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      |..||.+||+++++++||||..++
T Consensus       253 l~~~p~~Rp~~~~il~~~~~~~~~  276 (292)
T cd06644         253 LDKHPETRPSAAQLLEHPFVSSVT  276 (292)
T ss_pred             hcCCcccCcCHHHHhcCccccccc
Confidence            999999999999999999998764

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=100.00  E-value=6.5e-43  Score=330.75  Aligned_cols=282  Identities=29%  Similarity=0.539  Sum_probs=221.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--  139 (399)
                      ..+|++.+.||.|+||.||+|.+..+++.||+|++....   .....+..|+.+++.+.      |+||+++++++..  
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~   77 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFK------HDNIIAIRDILRPPG   77 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcC------CCCccCHHHhccccC
Confidence            367999999999999999999999999999999986432   22344556788888775      5999999987753  


Q ss_pred             --CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          140 --RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       140 --~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                        ....++||||++++|.+++....  .+++..+..++.||+.||.|||++||+||||||+||+++              
T Consensus        78 ~~~~~~~lv~e~~~~~l~~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~--------------  141 (334)
T cd07855          78 ADFKDVYVVMDLMESDLHHIIHSDQ--PLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN--------------  141 (334)
T ss_pred             CCCceEEEEEehhhhhHHHHhccCC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc--------------
Confidence              35789999999889999987655  599999999999999999999999999999999999994              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                .++.++|+|||++......       .....|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.|
T Consensus       142 ----------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~p  211 (334)
T cd07855         142 ----------EDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQL  211 (334)
T ss_pred             ----------CCCcEEecccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCc
Confidence                      4677999999987653211       124578999999999876 4689999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+.......+....+.++..+..............    .++.               ..........+..+.++.+
T Consensus       212 f~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~~~~~~~~~~~~~  272 (334)
T cd07855         212 FPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQ----NLPR---------------KQPVPWSKIFPKASPEALD  272 (334)
T ss_pred             cCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHh----hccc---------------CCCCCHHHHcccCCHHHHH
Confidence            99988888888888888888777655432111100000    0000               0000001122456888999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+||+.||.+|||++++++||||++.
T Consensus       273 li~~~l~~~P~~Rpt~~~~l~~~~~~~~  300 (334)
T cd07855         273 LLSQMLQFDPEERITVEQALQHPFLAQY  300 (334)
T ss_pred             HHHHHccCChhhCcCHHHHHhChhhhhc
Confidence            9999999999999999999999999875

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=100.00  E-value=2.9e-42  Score=325.34  Aligned_cols=283  Identities=30%  Similarity=0.535  Sum_probs=225.4

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|++.+.||.|+||.||+|.+..+++.||||.+...   ......+..|+++++.+.      |||++++++++..
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~   80 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLR------HENIISLSDIFIS   80 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcC------CCCeeeEeeeEec
Confidence            3567899999999999999999999999999999987532   223345667888888875      5999999998865


Q ss_pred             -CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 -RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 -~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                       ....++||||++++|.+++...   .+++..+..++.||+.||.|||++||+|+||||+||++                
T Consensus        81 ~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili----------------  141 (328)
T cd07856          81 PLEDIYFVTELLGTDLHRLLTSR---PLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILI----------------  141 (328)
T ss_pred             CCCcEEEEeehhccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeE----------------
Confidence             5688999999988999888754   48899999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                              +.++.++|+|||.+...........++..|+|||.+.+ ..++.++|+||||+++|+|++|..||...+...
T Consensus       142 --------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~  213 (328)
T cd07856         142 --------NENCDLKICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVN  213 (328)
T ss_pred             --------CCCCCEEeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                    34667999999988765555556678999999998866 578999999999999999999999999888888


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+.+..+.+|..+...........+........+                   .......+.++..+.++|.+||+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~li~~~l~~  274 (328)
T cd07856         214 QFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREP-------------------VPFSEKFKNADPSAIDLLEKMLVF  274 (328)
T ss_pred             HHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCC-------------------CcHHHHcCCCCHHHHHHHHHHcCC
Confidence            8888888888888776554322111000000000000                   000112245678899999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|||+++++.||||...
T Consensus       275 ~P~~R~t~~ell~~~~~~~~  294 (328)
T cd07856         275 DPQKRISAAEALAHPYLAPY  294 (328)
T ss_pred             ChhhCCCHHHHhcCCccccc
Confidence            99999999999999999765

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=100.00  E-value=8.3e-43  Score=324.63  Aligned_cols=253  Identities=27%  Similarity=0.449  Sum_probs=205.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      .++|++.+.||+|+||.||++.+..+++.||+|.+.... .....+..|+.+++.+.      |+|++++++++..++..
T Consensus        18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~   91 (297)
T cd06656          18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENK------NPNIVNYLDSYLVGDEL   91 (297)
T ss_pred             hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCC------CCCEeeEEEEEecCCEE
Confidence            367999999999999999999998899999999986532 22344566777777654      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.+.   .+++..+..++.|++.||.|||+.|++|+||||+|||++                   
T Consensus        92 ~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~-------------------  149 (297)
T cd06656          92 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG-------------------  149 (297)
T ss_pred             EEeecccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-------------------
Confidence            9999999 99999998764   389999999999999999999999999999999999993                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           .++.++|+|||.+......   .....|++.|+|||.+.+..++.++|+|||||++|+|++|..||...+.....
T Consensus       150 -----~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~  224 (297)
T cd06656         150 -----MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL  224 (297)
T ss_pred             -----CCCCEEECcCccceEccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhe
Confidence                 4667999999987653322   23457899999999999989999999999999999999999999765543222


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+... +. +                                             ....+..++..+.+||.+||..||
T Consensus       225 ~~~~~~-~~-~---------------------------------------------~~~~~~~~~~~~~~li~~~l~~~p  257 (297)
T cd06656         225 YLIATN-GT-P---------------------------------------------ELQNPERLSAVFRDFLNRCLEMDV  257 (297)
T ss_pred             eeeccC-CC-C---------------------------------------------CCCCccccCHHHHHHHHHHccCCh
Confidence            111100 00 0                                             001123456778899999999999


Q ss_pred             CCCCCHHHHhCCccccCC
Q 015867          380 SERLTARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~  397 (399)
                      .+|||+.++++||||+..
T Consensus       258 ~~Rps~~~il~~~~~~~~  275 (297)
T cd06656         258 DRRGSAKELLQHPFLKLA  275 (297)
T ss_pred             hhCcCHHHHhcCchhccc
Confidence            999999999999999865

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-42  Score=324.24  Aligned_cols=287  Identities=30%  Similarity=0.501  Sum_probs=212.7

Q ss_pred             CEEEEeeeccccceEEEEEEEcc--CCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQ--TQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~--~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +|++.+.||+|+||.||+|.+..  +++.||||.+....    ........|+.++..+.      |+||+++++++.+.
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~   74 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELK------HENVVSLVEVFLEH   74 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcC------CCCccceEEEEeCC
Confidence            58999999999999999999988  89999999987532    22345566888887775      59999999999887


Q ss_pred             --CeEEEEEccCCCCHHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          141 --NHICIVFEKLGPSLFDFLKRNK---YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       141 --~~~~lv~e~~~~~L~~~l~~~~---~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                        ...++||||++++|.+++....   ...+++..++.++.||+.||+|||++||+||||||+|||++.++         
T Consensus        75 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~---------  145 (316)
T cd07842          75 ADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEG---------  145 (316)
T ss_pred             CCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCC---------
Confidence              8899999999888888875432   12589999999999999999999999999999999999996533         


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~  288 (399)
                                 +.++.+||+|||++......      .....++..|+|||++.+. .++.++|+|||||++|+|++|++
T Consensus       146 -----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~  214 (316)
T cd07842         146 -----------PERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEP  214 (316)
T ss_pred             -----------CccceEEECCCccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCC
Confidence                       34788999999987753322      2244678999999998764 58999999999999999999999


Q ss_pred             CCCCCCcH---------HHHHHHHHHhCCCCHHHHHHhccccccccc--CCcccCCCCCccchHHHHHHHhhhhhhhhhh
Q 015867          289 LFQTHENL---------EHLAMMERALGPLPEHMIRRASRGTEKYFR--RGSRLNWPEGAVSRESIKAVKKLDRLKNMVS  357 (399)
Q Consensus       289 Pf~~~~~~---------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      ||.+.+..         ..+..+....+..+...+............  ......++.     .....         . .
T Consensus       215 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---------~-~  279 (316)
T cd07842         215 IFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPS-----NSLAK---------W-M  279 (316)
T ss_pred             CCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCC-----ccHHH---------H-H
Confidence            99865432         244555555555544444332221110000  000000000     00000         0 0


Q ss_pred             ccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       358 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ......+.++.++|.+||+.||.+|||+.|+++||||
T Consensus       280 ~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         280 EKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            0002567788999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1e-43  Score=332.44  Aligned_cols=243  Identities=25%  Similarity=0.375  Sum_probs=211.5

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      .+++++.||+|-||.||.|+...+. .||+|.++........+..|+++++.|+|      ++||++++++..++.+|||
T Consensus       207 ~l~l~~~LG~G~FG~V~~g~~~~~~-~vavk~ik~~~m~~~~f~~Ea~iMk~L~H------~~lV~l~gV~~~~~piyIV  279 (468)
T KOG0197|consen  207 ELKLIRELGSGQFGEVWLGKWNGST-KVAVKTIKEGSMSPEAFLREAQIMKKLRH------EKLVKLYGVCTKQEPIYIV  279 (468)
T ss_pred             HHHHHHHhcCCccceEEEEEEcCCC-cccceEEeccccChhHHHHHHHHHHhCcc------cCeEEEEEEEecCCceEEE
Confidence            3567789999999999999886543 59999998766666788899999999975      8999999999998999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||| .|+|.++|+......+.......++.||++|++||+++++|||||-..||||                       
T Consensus       280 tE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV-----------------------  336 (468)
T KOG0197|consen  280 TEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILV-----------------------  336 (468)
T ss_pred             EEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheee-----------------------
Confidence            9999 9999999998666689999999999999999999999999999999999999                       


Q ss_pred             CCCCCceEEeecCCcccCCCCC-cccc---cCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQNH-SSIV---STRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLA  300 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~~~-~~~~---gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~  300 (399)
                       +.+..+||+|||+|+...... ....   -...|.|||.+....++.++|||||||+||||+| |+.||.+.+..+++.
T Consensus       337 -~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~  415 (468)
T KOG0197|consen  337 -DEDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLE  415 (468)
T ss_pred             -ccCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHHHH
Confidence             557789999999999533322 1122   2567999999999999999999999999999999 999999999999999


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+.++..-+                                                 .++.||+++-+++..||+.+|+
T Consensus       416 ~le~GyRlp-------------------------------------------------~P~~CP~~vY~lM~~CW~~~P~  446 (468)
T KOG0197|consen  416 LLERGYRLP-------------------------------------------------RPEGCPDEVYELMKSCWHEDPE  446 (468)
T ss_pred             HHhccCcCC-------------------------------------------------CCCCCCHHHHHHHHHHhhCCcc
Confidence            887764322                                                 2357899999999999999999


Q ss_pred             CCCCHHHHh
Q 015867          381 ERLTARQAL  389 (399)
Q Consensus       381 ~R~t~~ell  389 (399)
                      +|||++.+.
T Consensus       447 ~RPtF~~L~  455 (468)
T KOG0197|consen  447 DRPTFETLR  455 (468)
T ss_pred             cCCCHHHHH
Confidence            999998764

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-42  Score=319.51  Aligned_cols=254  Identities=26%  Similarity=0.431  Sum_probs=206.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC----
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR----  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~----  140 (399)
                      .++|++.+.||+|++|.||+|.+..+++.|++|++.........+..|+.+++.+.     .|+||+++++++...    
T Consensus         5 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~   79 (275)
T cd06608           5 TGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYS-----NHPNIATFYGAFIKKNPPG   79 (275)
T ss_pred             hhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhc-----CCCChheEEEEEEecCCCC
Confidence            46899999999999999999999889999999999876555667788888888874     369999999998654    


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          141 --NHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       141 --~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                        ...++||||+ +++|.+++....  ...+++..+..++.|++.||.|||+.|++|+||+|+||+++            
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~------------  147 (275)
T cd06608          80 NDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT------------  147 (275)
T ss_pred             cceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc------------
Confidence              4589999999 889999987533  34689999999999999999999999999999999999994            


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhC-----CCCCCcchhHHHHHHHHHHHhCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILVELCTGE  287 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~ell~g~  287 (399)
                                  .++.++|+|||++.....   ......|+..|+|||++..     ..++.++||||||+++|+|++|.
T Consensus       148 ------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~  215 (275)
T cd06608         148 ------------KNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGK  215 (275)
T ss_pred             ------------cCCeEEECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCC
Confidence                        466799999998765332   2234568999999999864     34778999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHH
Q 015867          288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL  367 (399)
Q Consensus       288 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (399)
                      .||..........++....   +..                                            ......++.++
T Consensus       216 ~p~~~~~~~~~~~~~~~~~---~~~--------------------------------------------~~~~~~~~~~~  248 (275)
T cd06608         216 PPLCDMHPMRALFKIPRNP---PPT--------------------------------------------LKSPENWSKKF  248 (275)
T ss_pred             CCccccchHHHHHHhhccC---CCC--------------------------------------------CCchhhcCHHH
Confidence            9997655544443332210   000                                            00112356788


Q ss_pred             HHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          368 TDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      .+||.+||..||.+|||+.++++|||+
T Consensus       249 ~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         249 NDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             HHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=1.7e-42  Score=322.36  Aligned_cols=252  Identities=27%  Similarity=0.454  Sum_probs=208.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .+|++.+.||.|+||.||++.+..+++.||||.+.... .....+..|+.+++.+.      |+|++.+++++...+..+
T Consensus        19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~   92 (296)
T cd06655          19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELK------NPNIVNFLDSFLVGDELF   92 (296)
T ss_pred             ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcC------CCceeeeeeeEecCceEE
Confidence            46999999999999999999999999999999986432 22345666777777764      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++...   .+++..+..++.|++.||+|||++|++|+||||+||+++                    
T Consensus        93 lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~--------------------  149 (296)
T cd06655          93 VVMEYLAGGSLTDVVTET---CMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG--------------------  149 (296)
T ss_pred             EEEEecCCCcHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC--------------------
Confidence            999999 99999998754   489999999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                          .++.++|+|||++......   .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||...+..+...
T Consensus       150 ----~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~  225 (296)
T cd06655         150 ----MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY  225 (296)
T ss_pred             ----CCCCEEEccCccchhcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                4667999999987653322   234578999999999998889999999999999999999999998876655443


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+....  .+.                                             ...+..++..+.+||.+||..||.
T Consensus       226 ~~~~~~--~~~---------------------------------------------~~~~~~~~~~~~~li~~~l~~dp~  258 (296)
T cd06655         226 LIATNG--TPE---------------------------------------------LQNPEKLSPIFRDFLNRCLEMDVE  258 (296)
T ss_pred             HHHhcC--Ccc---------------------------------------------cCCcccCCHHHHHHHHHHhhcChh
Confidence            332210  000                                             011134567789999999999999


Q ss_pred             CCCCHHHHhCCccccCC
Q 015867          381 ERLTARQALNHPFFRNL  397 (399)
Q Consensus       381 ~R~t~~ell~hp~f~~~  397 (399)
                      +|||+.+++.||||+..
T Consensus       259 ~Rpt~~~il~~~~~~~~  275 (296)
T cd06655         259 KRGSAKELLQHPFLKLA  275 (296)
T ss_pred             hCCCHHHHhhChHhhhc
Confidence            99999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=100.00  E-value=2.3e-42  Score=314.42  Aligned_cols=249  Identities=25%  Similarity=0.456  Sum_probs=207.9

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|++.+.||+|+||.||++.+..+++.||+|.+...   ......+..|+.+++.+.      |+||+++++++...+..
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~   74 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMK------HPNIVQYQESFEENGNL   74 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCC------CCCeeeeEeeecCCCeE
Confidence            599999999999999999999999999999998642   223345667777777775      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+|||++                   
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~-------------------  135 (256)
T cd08218          75 YIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT-------------------  135 (256)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc-------------------
Confidence            9999999 89999999875544689999999999999999999999999999999999993                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           .++.++|+|||.+......   .....|++.|+|||++.+..++.++|+|||||++|+|++|..||...+..+..
T Consensus       136 -----~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~  210 (256)
T cd08218         136 -----KDGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLV  210 (256)
T ss_pred             -----CCCCEEEeeccceeecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHH
Confidence                 4567999999987654332   12346889999999999989999999999999999999999999876665554


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.....  +                                               ..+..++.++.++|.+||+.||
T Consensus       211 ~~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~p  241 (256)
T cd08218         211 LKIIRGSY--P-----------------------------------------------PVSSHYSYDLRNLVSQLFKRNP  241 (256)
T ss_pred             HHHhcCCC--C-----------------------------------------------CCcccCCHHHHHHHHHHhhCCh
Confidence            44422111  0                                               0113456778999999999999


Q ss_pred             CCCCCHHHHhCCccc
Q 015867          380 SERLTARQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~~ell~hp~f  394 (399)
                      .+||++.++++||||
T Consensus       242 ~~Rp~~~~vl~~~~~  256 (256)
T cd08218         242 RDRPSVNSILEKNFI  256 (256)
T ss_pred             hhCcCHHHHhhCcCC
Confidence            999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=100.00  E-value=3e-42  Score=319.88  Aligned_cols=257  Identities=25%  Similarity=0.419  Sum_probs=204.7

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC--
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR--  140 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~--  140 (399)
                      ...++|.+.+.||+|+||.||++.+..+++.+|+|++............|+.+++.+.     .|+|++++++++...  
T Consensus        19 ~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~-----~h~ni~~~~~~~~~~~~   93 (291)
T cd06639          19 DPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLP-----NHPNVVKFYGMFYKADK   93 (291)
T ss_pred             CCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhc-----CCCCeEEEEEEEEeccc
Confidence            3467899999999999999999999999999999998764444455667888887774     369999999988643  


Q ss_pred             ---CeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          141 ---NHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       141 ---~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                         +..++||||+ +++|.+++...  ....+++..+..++.|++.||+|||+.|++|+||||+||+++           
T Consensus        94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~-----------  162 (291)
T cd06639          94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT-----------  162 (291)
T ss_pred             cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc-----------
Confidence               4689999999 89999988642  223689999999999999999999999999999999999994           


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-----CCCCcchhHHHHHHHHHHHhC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILVELCTG  286 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~ell~g  286 (399)
                                   .++.++|+|||++.....   ......|+..|+|||++...     .++.++|+|||||++|+|++|
T Consensus       163 -------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g  229 (291)
T cd06639         163 -------------TEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDG  229 (291)
T ss_pred             -------------CCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhC
Confidence                         456799999998765332   22345789999999998643     368999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       287 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      ++||...+....+..+.+..   +..                                            .......+..
T Consensus       230 ~~p~~~~~~~~~~~~~~~~~---~~~--------------------------------------------~~~~~~~~~~  262 (291)
T cd06639         230 DPPLFDMHPVKTLFKIPRNP---PPT--------------------------------------------LLHPEKWCRS  262 (291)
T ss_pred             CCCCCCCcHHHHHHHHhcCC---CCC--------------------------------------------CCcccccCHH
Confidence            99998765544443332110   000                                            0011234567


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCCcccc
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      +.+||.+||+.||.+||++.|+++||||+
T Consensus       263 l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         263 FNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             HHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            89999999999999999999999999995

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=100.00  E-value=3e-42  Score=327.52  Aligned_cols=283  Identities=29%  Similarity=0.538  Sum_probs=222.6

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|.+.+.||+|+||.||+|.+..+++.||+|++....   .....+..|+.+++.++      |+||+++++++..
T Consensus        14 ~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~~iv~~~~~~~~   87 (345)
T cd07877          14 EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK------HENVIGLLDVFTP   87 (345)
T ss_pred             hccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcC------CCcccceeeeeee
Confidence            45678999999999999999999999999999999986422   12344556777777764      5999999988754


Q ss_pred             C------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 R------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ~------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      .      ...|+++++++++|.+++...   .+++..+..++.||+.||+|||++||+||||||+||+++          
T Consensus        88 ~~~~~~~~~~~lv~~~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~----------  154 (345)
T cd07877          88 ARSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN----------  154 (345)
T ss_pred             cccccccccEEEEehhcccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc----------
Confidence            2      457899999999999888654   489999999999999999999999999999999999993          


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                    .++.++|+|||++...........|+..|+|||.+.+ ..++.++|+|||||++|+|++|+.||..
T Consensus       155 --------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~  220 (345)
T cd07877         155 --------------EDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPG  220 (345)
T ss_pred             --------------CCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence                          4667999999998776555556778999999999876 5788999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+.......+....+..+..+...........+                 ..........  .........+.++.+||.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~--~~~~~~~~~~~~~~~li~  281 (345)
T cd07877         221 TDHIDQLKLILRLVGTPGAELLKKISSESARNY-----------------IQSLTQMPKM--NFANVFIGANPLAVDLLE  281 (345)
T ss_pred             CCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHH-----------------HHHhcccCCc--chhhhcCCCCHHHHHHHH
Confidence            888888888888877777776654432211100                 0000000000  000111235778899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||+.||.+|||+.++++||||++.
T Consensus       282 ~~L~~dp~~R~t~~e~l~h~~f~~~  306 (345)
T cd07877         282 KMLVLDSDKRITAAQALAHAYFAQY  306 (345)
T ss_pred             HHcCCChhhcCCHHHHhcChhhhhc
Confidence            9999999999999999999999864

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=100.00  E-value=4e-42  Score=312.85  Aligned_cols=249  Identities=30%  Similarity=0.465  Sum_probs=210.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|++++.||.|+||.||.+++..+++.+++|.+...   ......+..|+++++.+.      |+||+++++++.+.+..
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~   74 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQ------HPNIIAYYNHFMDDNTL   74 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCC------CCCeeEEEeEEecCCeE
Confidence            599999999999999999999999999999988643   233455677888888774      58999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.+.....+++..+..++.|++.+|.|||+.|++|+||||+||+++                   
T Consensus        75 ~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~-------------------  135 (256)
T cd08221          75 LIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT-------------------  135 (256)
T ss_pred             EEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe-------------------
Confidence            9999999 89999999876444689999999999999999999999999999999999994                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           .++.+||+|||++......   .....|++.|+|||++.+..++.++|+||||+++|+|++|..||...+..+..
T Consensus       136 -----~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~  210 (256)
T cd08221         136 -----KAGLIKLGDFGISKILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLV  210 (256)
T ss_pred             -----CCCCEEECcCcceEEcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                 4567999999987654332   24567899999999999888999999999999999999999999877766655


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+....  ++                                               .....++.++.++|.+||..||
T Consensus       211 ~~~~~~~--~~-----------------------------------------------~~~~~~~~~~~~~i~~~l~~~p  241 (256)
T cd08221         211 VKIVQGN--YT-----------------------------------------------PVVSVYSSELISLVHSLLQQDP  241 (256)
T ss_pred             HHHHcCC--CC-----------------------------------------------CCccccCHHHHHHHHHHcccCc
Confidence            5543211  00                                               0113456778999999999999


Q ss_pred             CCCCCHHHHhCCccc
Q 015867          380 SERLTARQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~~ell~hp~f  394 (399)
                      .+||++.++++|||+
T Consensus       242 ~~R~s~~~ll~~~~l  256 (256)
T cd08221         242 EKRPTADEVLDQPLL  256 (256)
T ss_pred             ccCCCHHHHhhCcCC
Confidence            999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=100.00  E-value=4.9e-42  Score=318.39  Aligned_cols=280  Identities=28%  Similarity=0.426  Sum_probs=210.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.....  .......|+.+++.+.      |+||+++++++..++..
T Consensus         5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~~~~   78 (291)
T cd07870           5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLK------HANIVLLHDIIHTKETL   78 (291)
T ss_pred             ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcC------CCCEeEEEEEEecCCeE
Confidence            579999999999999999999999999999999864322  2234566888888775      58999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      |+||||++++|.+++..... .+++..+..++.|++.||.|||+.||+|+||||+|||++                    
T Consensus        79 ~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~--------------------  137 (291)
T cd07870          79 TFVFEYMHTDLAQYMIQHPG-GLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS--------------------  137 (291)
T ss_pred             EEEEecccCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc--------------------
Confidence            99999998888887765432 578888999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC-cHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHE-NLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~-~~~~  298 (399)
                          .++.++|+|||++.....   ......++..|+|||++.+. .++.++|+||||+++|+|++|..||...+ ..+.
T Consensus       138 ----~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~  213 (291)
T cd07870         138 ----YLGELKLADFGLARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQ  213 (291)
T ss_pred             ----CCCcEEEeccccccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHH
Confidence                466799999998765322   22344578999999998764 58889999999999999999999997644 3455


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +..+....+.++..++....+.... ...-    ++...  ...         .......  -..+..+.+|+.+||+.|
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~--~~~---------~~~~~~~--~~~~~~~~~ll~~~l~~d  275 (291)
T cd07870         214 LEKIWTVLGVPTEDTWPGVSKLPNY-KPEW----FLPCK--PQQ---------LRVVWKR--LSRPPKAEDLASQMLMMF  275 (291)
T ss_pred             HHHHHHHcCCCChhhhhhhhhcccc-cchh----ccccC--Ccc---------hhhhccc--cCCChHHHHHHHHHhCcC
Confidence            6666666665555544433221110 0000    00000  000         0000000  012567889999999999


Q ss_pred             CCCCCCHHHHhCCccc
Q 015867          379 PSERLTARQALNHPFF  394 (399)
Q Consensus       379 P~~R~t~~ell~hp~f  394 (399)
                      |.+|||+.|++.||||
T Consensus       276 p~~R~t~~~~l~h~~~  291 (291)
T cd07870         276 PKDRISAQDALLHPYF  291 (291)
T ss_pred             cccCcCHHHHhcCCCC
Confidence            9999999999999998

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=100.00  E-value=3.9e-42  Score=321.31  Aligned_cols=252  Identities=29%  Similarity=0.493  Sum_probs=206.0

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +|++.+.||+|+||.||++.+..+++.|++|.+....    .....+..|+++++.+.      |+||+++++.+..++.
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~   75 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAE------NPFVVSMFCSFETKRH   75 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCC------CCCeeeeEEEEecCCE
Confidence            6999999999999999999999999999999986532    12234556777776654      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ |++|.+++...+  .+++..+..++.|++.||.|||+.|++||||||+||+++                  
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~------------------  135 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNIG--ALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT------------------  135 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC------------------
Confidence            99999999 899999998765  589999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCC------------------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQ------------------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  283 (399)
                            .++.++|+|||++.....                  ......|+..|+|||.+.+..++.++|+||||+++|+|
T Consensus       136 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el  209 (305)
T cd05609         136 ------SMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEF  209 (305)
T ss_pred             ------CCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHH
Confidence                  466799999998753110                  01124578899999999988999999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhh
Q 015867          284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA  363 (399)
Q Consensus       284 l~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (399)
                      ++|..||.+.+..+....+.......|                        .                       ....+
T Consensus       210 ~~g~~pf~~~~~~~~~~~~~~~~~~~~------------------------~-----------------------~~~~~  242 (305)
T cd05609         210 LVGCVPFFGDTPEELFGQVISDDIEWP------------------------E-----------------------GDEAL  242 (305)
T ss_pred             HhCCCCCCCCCHHHHHHHHHhcccCCC------------------------C-----------------------ccccC
Confidence            999999987766555544433221111                        1                       00245


Q ss_pred             hhHHHHHHHHccccCCCCCCC---HHHHhCCccccCC
Q 015867          364 RSTLTDLLHGLLRYDPSERLT---ARQALNHPFFRNL  397 (399)
Q Consensus       364 ~~~~~~li~~~L~~dP~~R~t---~~ell~hp~f~~~  397 (399)
                      +.++.+||.+||+.||.+||+   +.++++||||...
T Consensus       243 ~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         243 PADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             CHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence            777899999999999999998   7999999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=100.00  E-value=1.6e-42  Score=322.07  Aligned_cols=279  Identities=31%  Similarity=0.493  Sum_probs=218.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC--
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR--  140 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~--  140 (399)
                      ++|++.+.||.|+||.||+|.+..+++.+|+|.++....   .......|+.++..+.      |+||+++++++...  
T Consensus         5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~~~   78 (293)
T cd07843           5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQ------HPNIVTVKEVVVGSNL   78 (293)
T ss_pred             hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcC------CCCEEEEEEEEEecCC
Confidence            469999999999999999999998999999999864322   1223456777777774      59999999988776  


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          141 NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       141 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      +..|+||||++++|.+++..... .+++..+..++.||+.||+|||++|++|+||||+|||+                  
T Consensus        79 ~~~~lv~e~~~~~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili------------------  139 (293)
T cd07843          79 DKIYMVMEYVEHDLKSLMETMKQ-PFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLL------------------  139 (293)
T ss_pred             CcEEEEehhcCcCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE------------------
Confidence            89999999997799999877543 58999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                            +.++.++|+|||.+......   .....+++.|+|||.+.+. .++.++|+||||+++|+|++|.+||......
T Consensus       140 ------~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~  213 (293)
T cd07843         140 ------NNRGILKICDFGLAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEI  213 (293)
T ss_pred             ------CCCCcEEEeecCceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChH
Confidence                  34677999999987654332   2345678899999998765 4689999999999999999999999998888


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh-hhhHHHHHHHHcc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR-ARSTLTDLLHGLL  375 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L  375 (399)
                      +...++....+.++...+.....-....     ...|+...              ........+.. ++..+.+||.+||
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~li~~~l  274 (293)
T cd07843         214 DQLNKIFKLLGTPTEKIWPGFSELPGAK-----KKTFTKYP--------------YNQLRKKFPALSLSDNGFDLLNRLL  274 (293)
T ss_pred             HHHHHHHHHhCCCchHHHHHhhccchhc-----cccccccc--------------chhhhccccccCCChHHHHHHHHHh
Confidence            8888888887777766555432111000     00111100              00000111112 4778899999999


Q ss_pred             ccCCCCCCCHHHHhCCccc
Q 015867          376 RYDPSERLTARQALNHPFF  394 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f  394 (399)
                      +.||++|||+.|+++||||
T Consensus       275 ~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         275 TYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             ccCccccCCHHHHhcCCCC
Confidence            9999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-42  Score=315.59  Aligned_cols=249  Identities=29%  Similarity=0.479  Sum_probs=199.6

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchhhh----HHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||.|+||.||+|.+..+++.||+|+++......    .....|..++..     ...|+|++++++.+...+..|+||
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~-----~~~~~~i~~~~~~~~~~~~~~lv~   76 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMI-----QGESPYVAKLYYSFQSKDYLYLVM   76 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhh-----cCCCCCeeeeeeeEEcCCeEEEEE
Confidence            56999999999999998899999999986532211    112223222222     236799999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|.+++...+  .+++..+..++.|++.||.|||+.|++|+||+|+||+++                       
T Consensus        77 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~-----------------------  131 (260)
T cd05611          77 EYLNGGDCASLIKTLG--GLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID-----------------------  131 (260)
T ss_pred             eccCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC-----------------------
Confidence            999 999999998765  589999999999999999999999999999999999993                       


Q ss_pred             CCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Q 015867          227 PKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL  306 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~  306 (399)
                       .++.++|+|||++..... .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......+....
T Consensus       132 -~~~~~~l~dfg~~~~~~~-~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  209 (260)
T cd05611         132 -QTGHLKLTDFGLSRNGLE-NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRR  209 (260)
T ss_pred             -CCCcEEEeecccceeccc-cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc
Confidence             466799999998765332 344578999999999998889999999999999999999999998776655544443221


Q ss_pred             CCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCC--
Q 015867          307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT--  384 (399)
Q Consensus       307 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t--  384 (399)
                      .                        .|+.                      .....++..+.++|.+||+.||.+|||  
T Consensus       210 ~------------------------~~~~----------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~~~  243 (260)
T cd05611         210 I------------------------NWPE----------------------EVKEFCSPEAVDLINRLLCMDPAKRLGAN  243 (260)
T ss_pred             c------------------------CCCC----------------------cccccCCHHHHHHHHHHccCCHHHccCCC
Confidence            1                        1111                      011245778899999999999999995  


Q ss_pred             -HHHHhCCccccCCC
Q 015867          385 -ARQALNHPFFRNLN  398 (399)
Q Consensus       385 -~~ell~hp~f~~~~  398 (399)
                       ++|++.||||++++
T Consensus       244 ~~~~~l~~~~~~~~~  258 (260)
T cd05611         244 GYQEIKSHPFFKSIN  258 (260)
T ss_pred             cHHHHHcChHhhcCC
Confidence             57999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=100.00  E-value=2e-42  Score=314.63  Aligned_cols=250  Identities=28%  Similarity=0.453  Sum_probs=206.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.+.||+|+||.||+|.+..+++.|++|.+..... ...+..|+++++.+      .|+|++++++.+......|+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~~~~~l   75 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-LQEIIKEISILKQC------DSPYIVKYYGSYFKNTDLWI   75 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-HHHHHHHHHHHHhC------CCCcEeeeeeeeecCCcEEE
Confidence            469999999999999999999988899999999876433 56677888888877      45999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ++||+ +++|.+++..... .+++..+..++.|++.||.|||+.|++|+||+|+||+++                     
T Consensus        76 ~~e~~~~~~L~~~l~~~~~-~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---------------------  133 (256)
T cd06612          76 VMEYCGAGSVSDIMKITNK-TLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---------------------  133 (256)
T ss_pred             EEecCCCCcHHHHHHhCcc-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---------------------
Confidence            99999 8899999976443 689999999999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM  301 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~  301 (399)
                         .++.++|+|||++......   .....|+..|+|||++.+..++.++||||||+++|+|++|..||...........
T Consensus       134 ---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~  210 (256)
T cd06612         134 ---EEGQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFM  210 (256)
T ss_pred             ---CCCcEEEcccccchhcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhh
Confidence               4667999999987754332   2345688999999999999999999999999999999999999986554332221


Q ss_pred             HHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCC
Q 015867          302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE  381 (399)
Q Consensus       302 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  381 (399)
                      +....   +                                            ........++.++.+||.+||+.||.+
T Consensus       211 ~~~~~---~--------------------------------------------~~~~~~~~~~~~~~~~i~~~l~~~P~~  243 (256)
T cd06612         211 IPNKP---P--------------------------------------------PTLSDPEKWSPEFNDFVKKCLVKDPEE  243 (256)
T ss_pred             hccCC---C--------------------------------------------CCCCchhhcCHHHHHHHHHHHhcChhh
Confidence            11000   0                                            000011345677899999999999999


Q ss_pred             CCCHHHHhCCccc
Q 015867          382 RLTARQALNHPFF  394 (399)
Q Consensus       382 R~t~~ell~hp~f  394 (399)
                      |||+.|+++||||
T Consensus       244 Rps~~~il~~~~~  256 (256)
T cd06612         244 RPSAIQLLQHPFI  256 (256)
T ss_pred             CcCHHHHhcCCCC
Confidence            9999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=3.5e-42  Score=312.98  Aligned_cols=250  Identities=26%  Similarity=0.400  Sum_probs=208.3

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|++.+.||+|+||.||+|.+..+++.+|||.+....   .....+..|+++++.+.      |++++++++.+...+..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~   74 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLS------HPNIIEYYENFLEDKAL   74 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCC------CCchhheeeeEecCCEE
Confidence            5999999999999999999999999999999986532   23445667888888774      58999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.......+++..+..++.|++.+|+|||++|++|+||||+||+++.                  
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~------------------  136 (256)
T cd08220          75 MIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK------------------  136 (256)
T ss_pred             EEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC------------------
Confidence            9999999 899999998765446899999999999999999999999999999999999942                  


Q ss_pred             cccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                           .+..++|+|||.+......  .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+......
T Consensus       137 -----~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~  211 (256)
T cd08220         137 -----HKMVVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVL  211 (256)
T ss_pred             -----CCCEEEEccCCCceecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHH
Confidence                 3456899999988764332  234578999999999998889999999999999999999999998766555444


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+......                                                 ..+..++.++.+||.+||..||.
T Consensus       212 ~~~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~~l~~~p~  242 (256)
T cd08220         212 KIMSGTFA-------------------------------------------------PISDRYSPDLRQLILSMLNLDPS  242 (256)
T ss_pred             HHHhcCCC-------------------------------------------------CCCCCcCHHHHHHHHHHccCChh
Confidence            33221100                                                 01124577889999999999999


Q ss_pred             CCCCHHHHhCCccc
Q 015867          381 ERLTARQALNHPFF  394 (399)
Q Consensus       381 ~R~t~~ell~hp~f  394 (399)
                      +|||+.|+++||||
T Consensus       243 ~Rpt~~~ll~~p~~  256 (256)
T cd08220         243 KRPQLSQIMAQPIC  256 (256)
T ss_pred             hCCCHHHHhhCCCC
Confidence            99999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=100.00  E-value=3.2e-42  Score=315.18  Aligned_cols=248  Identities=29%  Similarity=0.446  Sum_probs=201.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      +|++.+.||.|+||.||+|.+ .+++.+|+|.+....       .....+..|+++++.+.      |+||+++++++.+
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~-~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~   73 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLT-NQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLK------HVNIVQYLGTCLD   73 (265)
T ss_pred             CccccceEeccCCeEEEEEEE-cCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcC------CCCEeeEeeEeec
Confidence            488999999999999999976 478889999886422       11234566777777665      5899999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..++||||+ +++|.+++.+..  .+++..+..++.|++.||+|||+.||+|+||||+||+++               
T Consensus        74 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---------------  136 (265)
T cd06631          74 DNTISIFMEFVPGGSISSILNRFG--PLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---------------  136 (265)
T ss_pred             CCeEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---------------
Confidence            99999999999 999999998765  589999999999999999999999999999999999993               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCC---------CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDN---------QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                               .++.++|+|||++....         .......|+..|+|||++.+..++.++|+||||+++|+|++|..|
T Consensus       137 ---------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p  207 (265)
T cd06631         137 ---------PNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPP  207 (265)
T ss_pred             ---------CCCeEEeccchhhHhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCc
Confidence                     46679999999875421         112345689999999999998999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |...+.......+.......+                                               ..+..++.++.+
T Consensus       208 ~~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~  240 (265)
T cd06631         208 LASMDRLAAMFYIGAHRGLMP-----------------------------------------------RLPDSFSAAAID  240 (265)
T ss_pred             cccCChHHHHHHhhhccCCCC-----------------------------------------------CCCCCCCHHHHH
Confidence            987655443333322111111                                               011345778899


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccc
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ||.+||..||.+|||+.++++||||
T Consensus       241 ~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         241 FVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             HHHHHhcCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999999998

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.4e-43  Score=334.18  Aligned_cols=277  Identities=25%  Similarity=0.403  Sum_probs=205.8

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      -|..++.||-|+||+|.++...+|...||.|.+++.+    ........|..||.+...      +.||+||..|++.+.
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn------~WVVrLyySFQDkdn  703 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADN------EWVVRLYYSFQDKDN  703 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCC------cceEEEEEEeccCCc
Confidence            4889999999999999999999999999999997643    223345557788877654      799999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC---
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS---  218 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~---  218 (399)
                      +|+||||+ ||++..+|-+.+  .|++..++.|+.++..|+++.|.+|+|||||||+||||+.+|++||+||+.+..   
T Consensus       704 LYFVMdYIPGGDmMSLLIrmg--IFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRW  781 (1034)
T KOG0608|consen  704 LYFVMDYIPGGDMMSLLIRMG--IFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW  781 (1034)
T ss_pred             eEEEEeccCCccHHHHHHHhc--cCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeecccccccee
Confidence            99999999 999999998877  699999999999999999999999999999999999996555444444432211   


Q ss_pred             --CCCCcc---------------cCCCCCceEEeecCCccc-CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHH
Q 015867          219 --GEMPFR---------------CLPKSSAIKLIDFGSTAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  280 (399)
Q Consensus       219 --~~~~~~---------------~~~~~~~~kl~Dfg~a~~-~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  280 (399)
                        ....|.               ..+...++|...+--... ........+||+.|+|||++...+|+..+|+||.||||
T Consensus       782 THdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil  861 (1034)
T KOG0608|consen  782 THDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVIL  861 (1034)
T ss_pred             ccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHH
Confidence              000000               000000000000000000 00001245899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccc
Q 015867          281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV  360 (399)
Q Consensus       281 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (399)
                      |||+.|++||...+..++-.+|..                            |                  ...+...+-
T Consensus       862 ~em~~g~~pf~~~tp~~tq~kv~n----------------------------w------------------~~~l~~~~~  895 (1034)
T KOG0608|consen  862 YEMLVGQPPFLADTPGETQYKVIN----------------------------W------------------RNFLHIPYQ  895 (1034)
T ss_pred             HHHhhCCCCccCCCCCcceeeeee----------------------------h------------------hhccccccc
Confidence            999999999988776555443321                            1                  111222344


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCC---HHHHhCCccccCCC
Q 015867          361 DRARSTLTDLLHGLLRYDPSERLT---ARQALNHPFFRNLN  398 (399)
Q Consensus       361 ~~~~~~~~~li~~~L~~dP~~R~t---~~ell~hp~f~~~~  398 (399)
                      .++|.++.++|.++. .+++.|+.   +.++..||||++|+
T Consensus       896 ~~ls~e~~~li~kLc-~sad~RLGkng~d~vKaHpfFkgID  935 (1034)
T KOG0608|consen  896 GNLSKEALDLIQKLC-CSADSRLGKNGADQVKAHPFFKGID  935 (1034)
T ss_pred             cccCHHHHHHHHHHh-cChhhhhcccchhhhhcCccccccc
Confidence            578899999999965 58889984   77899999999985

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=2.9e-44  Score=332.57  Aligned_cols=255  Identities=29%  Similarity=0.476  Sum_probs=218.8

Q ss_pred             CEEEE--eeeccccceEEEEEEEccCCeEEEEEEEec---chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           67 RYKIL--SKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        67 ~y~~~--~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      =|+|.  +.||+|.||+||-|.++++|+.||||++.+   ..+....+..|+.||+.+.      ||.||.+...|+..+
T Consensus       563 vYQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~------HPGiV~le~M~ET~e  636 (888)
T KOG4236|consen  563 VYQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLH------HPGIVNLECMFETPE  636 (888)
T ss_pred             HHHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcC------CCCeeEEEEeecCCc
Confidence            35554  789999999999999999999999999965   2355678889999999986      499999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          142 HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       142 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ..++|||-+.|++.+.|-+....++++...+.++.||+.||.|||-++|||+||||+|||+.+.                
T Consensus       637 rvFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~----------------  700 (888)
T KOG4236|consen  637 RVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASA----------------  700 (888)
T ss_pred             eEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccC----------------
Confidence            9999999997777777655554579999999999999999999999999999999999999653                


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           +....+||||||+|+.++..  ..+.+|||.|.|||++.+++|...-|+||+|||+|.-+.|..||....  ++-
T Consensus       701 -----~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdE--dIn  773 (888)
T KOG4236|consen  701 -----SPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDE--DIN  773 (888)
T ss_pred             -----CCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCcc--chh
Confidence                 34667999999999987654  467899999999999999999999999999999999999999997544  344


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      .+|+....-+|+.                                              .+..++.++.|||..+|++.=
T Consensus       774 dQIQNAaFMyPp~----------------------------------------------PW~eis~~AidlIn~LLqVkm  807 (888)
T KOG4236|consen  774 DQIQNAAFMYPPN----------------------------------------------PWSEISPEAIDLINNLLQVKM  807 (888)
T ss_pred             HHhhccccccCCC----------------------------------------------chhhcCHHHHHHHHHHHHHHH
Confidence            4555544333332                                              224678889999999999999


Q ss_pred             CCCCCHHHHhCCccccC
Q 015867          380 SERLTARQALNHPFFRN  396 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~  396 (399)
                      .+|.|....|.|||+++
T Consensus       808 ~kRysvdk~lsh~Wlq~  824 (888)
T KOG4236|consen  808 RKRYSVDKSLSHPWLQD  824 (888)
T ss_pred             HHhcchHhhccchhhhc
Confidence            99999999999999986

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=7.6e-43  Score=319.66  Aligned_cols=251  Identities=26%  Similarity=0.399  Sum_probs=201.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||+|+++.... ....+..|+.+++.+.      |+|++++++.+...+..+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~------h~~ii~~~~~~~~~~~~~   82 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCK------HSNIVAYFGSYLRRDKLW   82 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCC------CCCeeeEEEEEEeCCEEE
Confidence            468999999999999999999999999999999875432 2234556777777664      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++...+  .+++..+..++.|++.||.|||+.|++|+||||+||++.                    
T Consensus        83 lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~--------------------  140 (267)
T cd06645          83 ICMEFCGGGSLQDIYHVTG--PLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT--------------------  140 (267)
T ss_pred             EEEeccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC--------------------
Confidence            999999 889999998765  599999999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                          .++.++|+|||++......   .....|+..|+|||++.   ...++.++|+|||||++|+|++|..||.......
T Consensus       141 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~  216 (267)
T cd06645         141 ----DNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR  216 (267)
T ss_pred             ----CCCCEEECcceeeeEccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh
Confidence                4667999999987543222   23457899999999985   4568899999999999999999999997655433


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+.......+.                                             ......++..+.+||.+||+.
T Consensus       217 ~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~li~~~l~~  251 (267)
T cd06645         217 ALFLMTKSNFQPPK---------------------------------------------LKDKMKWSNSFHHFVKMALTK  251 (267)
T ss_pred             hHHhhhccCCCCCc---------------------------------------------ccccCCCCHHHHHHHHHHccC
Confidence            33222111100000                                             000123456788999999999


Q ss_pred             CCCCCCCHHHHhCCcc
Q 015867          378 DPSERLTARQALNHPF  393 (399)
Q Consensus       378 dP~~R~t~~ell~hp~  393 (399)
                      ||.+|||++++++|||
T Consensus       252 ~P~~R~~~~~ll~~~~  267 (267)
T cd06645         252 NPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CchhCcCHHHHhcCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=2.2e-42  Score=316.52  Aligned_cols=247  Identities=30%  Similarity=0.448  Sum_probs=202.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----------hhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      +|.+...||+|+||.||+|.+..+++.||+|.+.....          ....+..|+.+++.+.      |+||++++++
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~   74 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQ------HENIVQYLGS   74 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcC------CCCeeeEEEE
Confidence            47888999999999999999988899999998864221          1134556777777774      5999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +...+..++||||+ +++|.+++.+.+  .+++..+..++.|++.||+|||+.|++|+||||+||+++            
T Consensus        75 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~------------  140 (267)
T cd06628          75 SLDADHLNIFLEYVPGGSVAALLNNYG--AFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD------------  140 (267)
T ss_pred             EEeCCccEEEEEecCCCCHHHHHHhcc--CccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc------------
Confidence            99999999999999 889999998765  589999999999999999999999999999999999993            


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCC---------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG  286 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  286 (399)
                                  .++.++|+|||.+......         .....|+..|+|||.+.+..++.++|+||||+++|+|++|
T Consensus       141 ------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g  208 (267)
T cd06628         141 ------------NKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTG  208 (267)
T ss_pred             ------------CCCCEEecccCCCcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhC
Confidence                        4667999999987654311         1234688999999999988899999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       287 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      ..||...+.......+.....                                                 ...+..++..
T Consensus       209 ~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~  239 (267)
T cd06628         209 KHPFPDCTQLQAIFKIGENAS-------------------------------------------------PEIPSNISSE  239 (267)
T ss_pred             CCCCCCccHHHHHHHHhccCC-------------------------------------------------CcCCcccCHH
Confidence            999987654433332221100                                                 0111245677


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      +.++|.+||+.||.+||++.++++||||
T Consensus       240 ~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         240 AIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             HHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            8999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=100.00  E-value=1.1e-42  Score=328.62  Aligned_cols=281  Identities=31%  Similarity=0.547  Sum_probs=223.6

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC--
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN--  141 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--  141 (399)
                      +|++.+.||.|+||.||+|.+..+++.||||.+....   .....+..|+.+++.+.      |+||+++++++...+  
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~   74 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLR------HENIIGLLDILRPPSPE   74 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcC------CcchhhhhhhhcccCcc
Confidence            5999999999999999999998889999999986532   23456777888888775      599999999887765  


Q ss_pred             ---eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          142 ---HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       142 ---~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                         ..|+||||++++|.+++.+..  .+++..+..++.||+.||.|||++||+|+||||+|||++               
T Consensus        75 ~~~~~~lv~e~~~~~l~~~l~~~~--~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~---------------  137 (330)
T cd07834          75 DFNDVYIVTELMETDLHKVIKSPQ--PLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN---------------  137 (330)
T ss_pred             cccceEEEecchhhhHHHHHhCCC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---------------
Confidence               789999999889999997765  699999999999999999999999999999999999993               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                               .++.++|+|||.+......      .....++..|+|||++.+. .++.++|+||||+++|+|++|.+||.
T Consensus       138 ---------~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~  208 (330)
T cd07834         138 ---------SNCDLKICDFGLARGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFP  208 (330)
T ss_pred             ---------CCCCEEEcccCceEeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcC
Confidence                     4678999999988764332      2345689999999999887 89999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+....+....+.++...+..........+                 .....  ...........+.++.++.+||
T Consensus       209 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~--~~~~~~~~~~~~~~~~~~~~li  269 (330)
T cd07834         209 GRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNY-----------------LKSLP--KKPKKPLSKLFPGASPEAIDLL  269 (330)
T ss_pred             CCCHHHHHHHHHHhcCCCChhHhhhccccchhhH-----------------Hhhcc--cCCcchhHHhcccCCHHHHHHH
Confidence            9998888888888877776554332111100000                 00000  0000001112344688899999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccCCC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .+||+.||.+|||++++++||||+++.
T Consensus       270 ~~~l~~~P~~Rpt~~~ll~~~~~~~~~  296 (330)
T cd07834         270 EKMLVFDPKKRITADEALAHPYLAQLH  296 (330)
T ss_pred             HHHccCChhhCCCHHHHHhCccHHhhc
Confidence            999999999999999999999998763

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=100.00  E-value=2.1e-42  Score=327.42  Aligned_cols=281  Identities=27%  Similarity=0.454  Sum_probs=217.8

Q ss_pred             ccCCCEEE-EeeeccccceEEEEEEEccCCeEEEEEEEecchhhh---------------HHHHHHHHHHHHhhhcCCCC
Q 015867           63 NLTPRYKI-LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR---------------DAAMIEIDVLQHLAKNDKGG  126 (399)
Q Consensus        63 ~~~~~y~~-~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---------------~~~~~e~~~l~~l~~~~~~~  126 (399)
                      .+.++|.. .+.||.|+||+||+|.+..+++.||||+++......               ..+..|+++++.+.      
T Consensus         5 ~~~~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------   78 (335)
T PTZ00024          5 SISERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIK------   78 (335)
T ss_pred             ccccchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCC------
Confidence            45667865 477999999999999999999999999986432211               13556777777775      


Q ss_pred             CcceeeeceeeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       127 ~~~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                      |+||+++++++...+..++||||+.++|.+++....  .+++..+..++.|++.||+|||+.||+|+||||+||++.   
T Consensus        79 h~~iv~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~--~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---  153 (335)
T PTZ00024         79 HENIMGLVDVYVEGDFINLVMDIMASDLKKVVDRKI--RLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---  153 (335)
T ss_pred             CcceeeeeEEEecCCcEEEEEeccccCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---
Confidence            599999999999999999999999889999997755  589999999999999999999999999999999999994   


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCC-----------------CCCcccccCCCccchhhhhCC-CCC
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-----------------QNHSSIVSTRHYRAPEVILGL-GWS  268 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----------------~~~~~~~gt~~y~aPE~~~~~-~~~  268 (399)
                                           .++.++|+|||.+....                 .......++..|+|||.+.+. .++
T Consensus       154 ---------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~  212 (335)
T PTZ00024        154 ---------------------SKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYH  212 (335)
T ss_pred             ---------------------CCCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCC
Confidence                                 45678999999775433                 111233568899999998764 478


Q ss_pred             CcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHh
Q 015867          269 YPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK  348 (399)
Q Consensus       269 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  348 (399)
                      .++|+|||||++|+|++|.+||.+.+..+.+..+....+.++...++........         -+......        
T Consensus       213 ~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~--------  275 (335)
T PTZ00024        213 FAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLY---------TEFTPRKP--------  275 (335)
T ss_pred             cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccc---------cccCcCCc--------
Confidence            9999999999999999999999999888888888887776655433322110000         00000000        


Q ss_pred             hhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                           .......+..+.++.+||.+||+.||++|||++|++.||||++-
T Consensus       276 -----~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~  319 (335)
T PTZ00024        276 -----KDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSD  319 (335)
T ss_pred             -----ccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCC
Confidence                 00011123557788999999999999999999999999999863

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=2e-42  Score=319.53  Aligned_cols=252  Identities=29%  Similarity=0.479  Sum_probs=205.2

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      |++.+.||+|+||.||++.+..++..+++|.+.... .....+..|+++++.+.      |+|++++++.+...+..++|
T Consensus         7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~ii~~~~~~~~~~~~~~v   80 (282)
T cd06643           7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCD------HPNIVKLLDAFYYENNLWIL   80 (282)
T ss_pred             HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCC------CCCeeeEEEEEeeCCEEEEE
Confidence            788899999999999999999999999999986432 23345666788877764      59999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|..++.+.. ..+++..+..++.|++.||.|||+.|++|+||||+|||++                      
T Consensus        81 ~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~----------------------  137 (282)
T cd06643          81 IEFCAGGAVDAVMLELE-RPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT----------------------  137 (282)
T ss_pred             EEecCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc----------------------
Confidence            9999 889988876533 2689999999999999999999999999999999999993                      


Q ss_pred             CCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                        .++.++|+|||++.....   ......|+..|+|||++.     +..++.++|+|||||++|+|++|.+||...+..+
T Consensus       138 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~  215 (282)
T cd06643         138 --LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR  215 (282)
T ss_pred             --cCCCEEEccccccccccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH
Confidence              466799999998765322   223457899999999984     3467889999999999999999999998776655


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+.....+..                                               ..+..++.++.+||.+||+.
T Consensus       216 ~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~  248 (282)
T cd06643         216 VLLKIAKSEPPTL-----------------------------------------------AQPSRWSSEFKDFLKKCLEK  248 (282)
T ss_pred             HHHHHhhcCCCCC-----------------------------------------------CCccccCHHHHHHHHHHccC
Confidence            5544433211100                                               01123567789999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|||+.++++||||+..
T Consensus       249 ~p~~Rp~~~~il~~~~~~~~  268 (282)
T cd06643         249 NVDARWTTTQLLQHPFVTVN  268 (282)
T ss_pred             ChhhCcCHHHHhcCCCEecc
Confidence            99999999999999999854

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.6e-42  Score=320.80  Aligned_cols=256  Identities=22%  Similarity=0.362  Sum_probs=205.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++++.||+|+||.||++.+..+++.||+|.+...  ......+..|+++++.+.      |+||+++++.+...+..
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~   74 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAV------SPYIVDFYGAFFIEGAV   74 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcC------CCcHHhhhhheecCCeE
Confidence            3689999999999999999999989999999988642  222345667888887765      58999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNK-YCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ++||||+ +++|.+++.... ...+++..+..++.||+.||.|||+ .||+|+||||+||+++                 
T Consensus        75 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~-----------------  137 (286)
T cd06622          75 YMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN-----------------  137 (286)
T ss_pred             EEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC-----------------
Confidence            9999999 889999887641 2258999999999999999999997 5999999999999993                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCC-CCCcccccCCCccchhhhhCC------CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDN-QNHSSIVSTRHYRAPEVILGL------GWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                             .++.++|+|||.+.... .......|+..|+|||++.+.      .++.++|+|||||++|+|++|..||...
T Consensus       138 -------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~  210 (286)
T cd06622         138 -------GNGQVKLCDFGVSGNLVASLAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPE  210 (286)
T ss_pred             -------CCCCEEEeecCCcccccCCccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCc
Confidence                   46779999999876532 233445688999999998653      3588999999999999999999999765


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      ........+.......+                                              ...++.++.++.+||.+
T Consensus       211 ~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~  244 (286)
T cd06622         211 TYANIFAQLSAIVDGDP----------------------------------------------PTLPSGYSDDAQDFVAK  244 (286)
T ss_pred             chhhHHHHHHHHhhcCC----------------------------------------------CCCCcccCHHHHHHHHH
Confidence            54443333322211111                                              01123467888999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||+.||.+||++.++++||||...
T Consensus       245 ~l~~~p~~Rp~~~~l~~~~~~~~~  268 (286)
T cd06622         245 CLNKIPNRRPTYAQLLEHPWLVKY  268 (286)
T ss_pred             HcccCcccCCCHHHHhcChhhhhc
Confidence            999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=100.00  E-value=3.9e-42  Score=317.66  Aligned_cols=276  Identities=33%  Similarity=0.548  Sum_probs=217.9

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      |++.+.||.|++|.||+|.+..+|..||+|++....   .....+..|+++++.+.      |+|++++++++.+.+..|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~------~~~iv~~~~~~~~~~~~~   74 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELN------HPNIVRLLDVVHSENKLY   74 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcC------CCCccCHhheeccCCeEE
Confidence            678899999999999999999999999999986432   22245667888888875      599999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          145 IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       145 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      +||||++++|.+++.......+++..+..++.|++.||+|||+++++|+||+|+||+++                     
T Consensus        75 iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---------------------  133 (283)
T cd07835          75 LVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---------------------  133 (283)
T ss_pred             EEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---------------------
Confidence            99999988999999876644689999999999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                         .++.++|+|||.+......   .....++..|+|||++.+. .++.++|+||||+++|+|++|.+||...+......
T Consensus       134 ---~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~  210 (283)
T cd07835         134 ---REGALKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLF  210 (283)
T ss_pred             ---CCCcEEEeecccccccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence               4677999999988653322   1234568899999988764 57899999999999999999999999888877777


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+.+....+....+...........      ..+...               ........+.++..+.++|.+||+.||.
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~---------------~~~~~~~~~~~~~~~~~li~~~l~~~P~  269 (283)
T cd07835         211 RIFRTLGTPDEDVWPGVTSLPDYKP------TFPKWA---------------RQDLSKVVPNLDEDGLDLLSKMLVYDPA  269 (283)
T ss_pred             HHHHHhCCCChHHhhhhhhchhhhh------hccccc---------------ccchhhhcCCCCHHHHHHHHHHhcCChh
Confidence            7777766666555433321110000      000000               0000112345678899999999999999


Q ss_pred             CCCCHHHHhCCccc
Q 015867          381 ERLTARQALNHPFF  394 (399)
Q Consensus       381 ~R~t~~ell~hp~f  394 (399)
                      +|||++|+++||||
T Consensus       270 ~Rpt~~~il~~~~~  283 (283)
T cd07835         270 KRISAKAALQHPYF  283 (283)
T ss_pred             hCcCHHHHhcCCCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=100.00  E-value=7.6e-42  Score=316.09  Aligned_cols=277  Identities=31%  Similarity=0.512  Sum_probs=213.4

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe--
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH--  142 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~--  142 (399)
                      |++.+.||+|+||.||+|++..+++.||+|.++....   .......|+.+++.+..   ..|+|++++++++...+.  
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~~i~~~~~~~~~~~~~~   77 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLES---FEHPNIVRLLDVCHGPRTDR   77 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhc---cCCCCcceEEEEEeeccCCC
Confidence            6889999999999999999988899999999964322   12345567777777653   347999999999987766  


Q ss_pred             ---EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          143 ---ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       143 ---~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                         .+++|||++++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++                
T Consensus        78 ~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~----------------  141 (287)
T cd07838          78 ELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT----------------  141 (287)
T ss_pred             CceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc----------------
Confidence               9999999977999999876544699999999999999999999999999999999999994                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                              .++.++|+|||.+......  .....++..|+|||++.+..++.++|+|||||++|+|++|.+||...+..+
T Consensus       142 --------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~  213 (287)
T cd07838         142 --------SDGQVKIADFGLARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEAD  213 (287)
T ss_pred             --------cCCCEEEeccCcceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHH
Confidence                    4578999999987654322  234457889999999999999999999999999999999999999888888


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ...++..........-+..........        ++...               ........+..+..+.+||.+||+.
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~---------------~~~~~~~~~~~~~~~~~li~~~l~~  270 (287)
T cd07838         214 QLDKIFDVIGLPSEEEWPRNVSLPRSS--------FPSYT---------------PRSFKSFVPEICEEGLDLLKKMLTF  270 (287)
T ss_pred             HHHHHHHHcCCCChHhcCCCcccchhh--------ccccc---------------ccchhhhhhhhhHHHHHHHHHHhcc
Confidence            777776654432221110000000000        00000               0000111234567889999999999


Q ss_pred             CCCCCCCHHHHhCCccc
Q 015867          378 DPSERLTARQALNHPFF  394 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f  394 (399)
                      ||.+||++.++++||||
T Consensus       271 dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         271 NPHKRISAFEALQHPYF  287 (287)
T ss_pred             CCccCCCHHHHhcCcCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=100.00  E-value=4.3e-42  Score=317.31  Aligned_cols=255  Identities=23%  Similarity=0.426  Sum_probs=200.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||+|+||.||++.+..+|+.||||.++....  .......|..++...     .+|+|++++++++..++..
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~~iv~~~~~~~~~~~~   75 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRS-----VDCPYTVTFYGALFREGDV   75 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHH-----cCCCCeeeeeEEEecCCcE
Confidence            369999999999999999999999999999999875321  223334444443222     3579999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          144 CIVFEKLGPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      |+||||+.++|.+++...  ....+++..+..++.||+.||+|||++ +++||||||+|||+                  
T Consensus        76 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~------------------  137 (283)
T cd06617          76 WICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLI------------------  137 (283)
T ss_pred             EEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE------------------
Confidence            999999988998888653  223689999999999999999999997 99999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhC----CCCCCcchhHHHHHHHHHHHhCCCCCCCC-
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILG----LGWSYPCDMWSVGCILVELCTGEALFQTH-  293 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ell~g~~Pf~~~-  293 (399)
                            +.++.+||+|||++......  .....|+..|+|||++.+    ..++.++|+|||||++|+|++|..||... 
T Consensus       138 ------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  211 (283)
T cd06617         138 ------NRNGQVKLCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWK  211 (283)
T ss_pred             ------CCCCCEEEeecccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccc
Confidence                  44677999999988754322  233568899999999865    45789999999999999999999999643 


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      ...+.+..+.....  +                                              ......++.++.+||.+
T Consensus       212 ~~~~~~~~~~~~~~--~----------------------------------------------~~~~~~~~~~l~~li~~  243 (283)
T cd06617         212 TPFQQLKQVVEEPS--P----------------------------------------------QLPAEKFSPEFQDFVNK  243 (283)
T ss_pred             cCHHHHHHHHhcCC--C----------------------------------------------CCCccccCHHHHHHHHH
Confidence            22232222211100  0                                              00012357788999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||..||.+|||+.++++||||...
T Consensus       244 ~l~~~p~~Rp~~~~il~~~~~~~~  267 (283)
T cd06617         244 CLKKNYKERPNYPELLQHPFFELH  267 (283)
T ss_pred             HccCChhhCcCHHHHhcCchhhhc
Confidence            999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=100.00  E-value=4.3e-42  Score=317.80  Aligned_cols=278  Identities=31%  Similarity=0.526  Sum_probs=212.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||+|.+.....   ....+..|+++++.+.      |+||+++++++..++.
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~   74 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLR------HENLVNLIEVFRRKKR   74 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcC------CcchhhHHHhcccCCe
Confidence            469999999999999999999988899999998754221   2344566777777765      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|..+.....  .+++..+..++.||+.||.|||+.|++|+||+|+||+++                  
T Consensus        75 ~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~------------------  134 (286)
T cd07846          75 LYLVFEFVDHTVLDDLEKYPN--GLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS------------------  134 (286)
T ss_pred             EEEEEecCCccHHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC------------------
Confidence            99999999 777777665543  489999999999999999999999999999999999993                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                            .++.++|+|||++.....   ......++..|+|||++.+. .++.++||||||+++|+|++|.+||......+
T Consensus       135 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~  208 (286)
T cd07846         135 ------QSGVVKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDID  208 (286)
T ss_pred             ------CCCcEEEEeeeeeeeccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHH
Confidence                  467799999998765322   12345688999999998764 57889999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+......+.............  + ..  ...|.....              .......+.++..+.+|+.+||..
T Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~--~~~~~~~~~--------------~~~~~~~~~~~~~~~~li~~~l~~  269 (286)
T cd07846         209 QLYHIIKCLGNLIPRHQEIFQKNPL--F-AG--MRLPEVKEI--------------EPLEKRFPKLSGLVLDLAKQCLRI  269 (286)
T ss_pred             HHHHHHHHhCCCchhhHHHhccchH--h-hc--cccccccCc--------------chHHHhCCCcCHHHHHHHHHHhcC
Confidence            7777776665554332111100000  0 00  000000000              000011346788899999999999


Q ss_pred             CCCCCCCHHHHhCCccc
Q 015867          378 DPSERLTARQALNHPFF  394 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f  394 (399)
                      ||.+|||+.++++||||
T Consensus       270 ~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         270 DPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             CcccchhHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=100.00  E-value=3.8e-42  Score=314.64  Aligned_cols=255  Identities=25%  Similarity=0.417  Sum_probs=206.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||.|+||+||+|.+..++..+|+|++....  .....+..|+++++.+.      |+|++++++.+...+..
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~   74 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCN------HPNVVKYYTSFVVGDEL   74 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcC------CCCEEEEEEEEeeCCEE
Confidence            46999999999999999999988899999999986422  23455677888777765      58999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKY-CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ++|||++ +++|.+++..... ..+++..+..++.|++.||.|||+.|++|+||||+||+++                  
T Consensus        75 ~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~------------------  136 (267)
T cd06610          75 WLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG------------------  136 (267)
T ss_pred             EEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc------------------
Confidence            9999999 9999999976532 3689999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                            .++.++|+|||++......       .....|+..|+|||++... .++.++|+||||+++|+|++|..||...
T Consensus       137 ------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~  210 (267)
T cd06610         137 ------EDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKY  210 (267)
T ss_pred             ------CCCCEEEcccchHHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCcccc
Confidence                  4567999999987543221       2344689999999999877 7899999999999999999999999876


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +.......+....   +.                    .++.                     ......++..+.+||.+
T Consensus       211 ~~~~~~~~~~~~~---~~--------------------~~~~---------------------~~~~~~~~~~~~~li~~  246 (267)
T cd06610         211 PPMKVLMLTLQND---PP--------------------SLET---------------------GADYKKYSKSFRKMISL  246 (267)
T ss_pred             ChhhhHHHHhcCC---CC--------------------CcCC---------------------ccccccccHHHHHHHHH
Confidence            5544333332210   00                    0000                     00123567888999999


Q ss_pred             ccccCCCCCCCHHHHhCCccc
Q 015867          374 LLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ||..||.+|||++++++||||
T Consensus       247 ~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         247 CLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             HcCCChhhCcCHHHHhhCCCC
Confidence            999999999999999999998

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=100.00  E-value=1.7e-42  Score=317.36  Aligned_cols=251  Identities=26%  Similarity=0.387  Sum_probs=200.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||+|++.... ........|+.+++.+.      |+||+++++++...+..+
T Consensus         9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~------h~~ii~~~~~~~~~~~~~   82 (267)
T cd06646           9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECK------HCNIVAYFGSYLSREKLW   82 (267)
T ss_pred             hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcC------CCCeeeeeEEEEeCCEEE
Confidence            46999999999999999999999999999999986432 22344566777777764      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++.+.+  .+++..+..++.|++.||.|||+.||+|+||||+||+++                    
T Consensus        83 iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~--------------------  140 (267)
T cd06646          83 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT--------------------  140 (267)
T ss_pred             EEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC--------------------
Confidence            999999 889999987655  589999999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                          .++.++|+|||++......   .....|+..|+|||.+.   ...++.++|+|||||++|+|++|..||......+
T Consensus       141 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~  216 (267)
T cd06646         141 ----DNGDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR  216 (267)
T ss_pred             ----CCCCEEECcCccceeecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh
Confidence                4667999999987653221   23457899999999985   3457889999999999999999999996544322


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+.......+                     .+                        .....++..+.+||.+||..
T Consensus       217 ~~~~~~~~~~~~~---------------------~~------------------------~~~~~~~~~~~~li~~~l~~  251 (267)
T cd06646         217 ALFLMSKSNFQPP---------------------KL------------------------KDKTKWSSTFHNFVKISLTK  251 (267)
T ss_pred             hheeeecCCCCCC---------------------CC------------------------ccccccCHHHHHHHHHHhhC
Confidence            2211111000000                     00                        01123567889999999999


Q ss_pred             CCCCCCCHHHHhCCcc
Q 015867          378 DPSERLTARQALNHPF  393 (399)
Q Consensus       378 dP~~R~t~~ell~hp~  393 (399)
                      ||.+|||++++++|+|
T Consensus       252 ~P~~Rp~~~~il~~l~  267 (267)
T cd06646         252 NPKKRPTAERLLTHLF  267 (267)
T ss_pred             ChhhCcCHHHHhcCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=4.2e-42  Score=316.64  Aligned_cols=249  Identities=27%  Similarity=0.444  Sum_probs=200.9

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      ||+|+||+||+|.+..+|+.||+|++....    .....+..|+++++.++      |+|++.+++.+...+..|+||||
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~lv~e~   74 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVS------SRFIVSLAYAFETKDDLCLVMTL   74 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCC------CCCEeeeeeEEecCCeEEEEEec
Confidence            699999999999999999999999986432    12233456778887775      59999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      + +++|.+++.+.....+++..+..++.|++.||.|||+.|++|+||+|+||++                        +.
T Consensus        75 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~------------------------~~  130 (277)
T cd05577          75 MNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLL------------------------DD  130 (277)
T ss_pred             CCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE------------------------CC
Confidence            9 8999999987665569999999999999999999999999999999999999                        34


Q ss_pred             CCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Q 015867          229 SSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL  306 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~  306 (399)
                      ++.++|+|||.+.....  ......++..|+|||++.+..++.++|+||||+++|+|++|+.||...+.......+....
T Consensus       131 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  210 (277)
T cd05577         131 HGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRT  210 (277)
T ss_pred             CCCEEEccCcchhhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhcc
Confidence            66799999998765322  2234567889999999998889999999999999999999999997654421111111110


Q ss_pred             CCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC---
Q 015867          307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL---  383 (399)
Q Consensus       307 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~---  383 (399)
                      ..                                              .....++.++..+.+||.+||+.||.+||   
T Consensus       211 ~~----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~  244 (277)
T cd05577         211 LE----------------------------------------------MAVEYPDKFSPEAKDLCEALLQKDPEKRLGCR  244 (277)
T ss_pred             cc----------------------------------------------ccccCCccCCHHHHHHHHHHccCChhHccCCC
Confidence            00                                              00011234577889999999999999999   


Q ss_pred             --CHHHHhCCccccCCC
Q 015867          384 --TARQALNHPFFRNLN  398 (399)
Q Consensus       384 --t~~ell~hp~f~~~~  398 (399)
                        ++.++++||||++++
T Consensus       245 ~~~~~~ll~h~~~~~~~  261 (277)
T cd05577         245 GGSADEVREHPLFKDLN  261 (277)
T ss_pred             cccHHHHHhChhhhcCC
Confidence              899999999998764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.2e-44  Score=334.81  Aligned_cols=250  Identities=26%  Similarity=0.378  Sum_probs=214.0

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .|.-++.||.|+||.||-|++..+.+.||||.+....+    .-.....|+..|+.+.      |||++.+-++|..+..
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~------HPntieYkgCyLre~T  100 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLR------HPNTIEYKGCYLREHT  100 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhcc------CCCcccccceeeccch
Confidence            47778999999999999999999999999999964221    1233556888888876      5999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .+||||||-|+-.|++...+. ++.+..+..|+.+.+.||+|||+.+.||||||..|||++                   
T Consensus       101 aWLVMEYClGSAsDlleVhkK-plqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLs-------------------  160 (948)
T KOG0577|consen  101 AWLVMEYCLGSASDLLEVHKK-PLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLS-------------------  160 (948)
T ss_pred             HHHHHHHHhccHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEec-------------------
Confidence            999999998898998877653 699999999999999999999999999999999999994                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           ..+.|||+|||++.... ..++++|||+|||||++.   ...|+-++||||||++..||...++|+-..+.+..+
T Consensus       161 -----e~g~VKLaDFGSAsi~~-PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSAL  234 (948)
T KOG0577|consen  161 -----EPGLVKLADFGSASIMA-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL  234 (948)
T ss_pred             -----CCCeeeeccccchhhcC-chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHH
Confidence                 56789999999986543 346899999999999986   457999999999999999999999999988888888


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..|.....+.-                                                ..+..|..|++|+..||+.=|
T Consensus       235 YHIAQNesPtL------------------------------------------------qs~eWS~~F~~Fvd~CLqKip  266 (948)
T KOG0577|consen  235 YHIAQNESPTL------------------------------------------------QSNEWSDYFRNFVDSCLQKIP  266 (948)
T ss_pred             HHHHhcCCCCC------------------------------------------------CCchhHHHHHHHHHHHHhhCc
Confidence            88866533211                                                113457889999999999999


Q ss_pred             CCCCCHHHHhCCccccC
Q 015867          380 SERLTARQALNHPFFRN  396 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~  396 (399)
                      .+|||.+++|.|+|...
T Consensus       267 qeRptse~ll~H~fv~R  283 (948)
T KOG0577|consen  267 QERPTSEELLKHRFVLR  283 (948)
T ss_pred             ccCCcHHHHhhcchhcc
Confidence            99999999999999864

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.2e-43  Score=331.97  Aligned_cols=253  Identities=27%  Similarity=0.417  Sum_probs=218.5

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhh---hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY---RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      -.+.|.+.+.||+|.|+.|.++++..++..||||++.++...   ...+..|+++++.+.      |||||+++.+.+.+
T Consensus        54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~------HPnIvkl~~v~~t~  127 (596)
T KOG0586|consen   54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLN------HPNIVKLFSVIETE  127 (596)
T ss_pred             cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcC------Ccceeeeeeeeeec
Confidence            345799999999999999999999999999999999764432   234677888888876      59999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      ..+|+||||+ +|.+++++.+++  .+.+..++.++.|+..|++|||+++|||||||.+|||+                 
T Consensus       128 ~~lylV~eya~~ge~~~yl~~~g--r~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL-----------------  188 (596)
T KOG0586|consen  128 ATLYLVMEYASGGELFDYLVKHG--RMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILL-----------------  188 (596)
T ss_pred             ceeEEEEEeccCchhHHHHHhcc--cchhhhhhhhhHHHHHHHHHHhhcceeccccchhhccc-----------------
Confidence            9999999999 999999999988  47779999999999999999999999999999999998                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             +.+..+||+|||++.+..  ....++||++.|+|||++.+..| ++.+|+||+|+++|-|+.|.+||++.+-.
T Consensus       189 -------~~~mnikIaDfgfS~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk  261 (596)
T KOG0586|consen  189 -------DENMNIKIADFGFSTFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLK  261 (596)
T ss_pred             -------ccccceeeeccccceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccc
Confidence                   567889999999998744  34578999999999999999876 58899999999999999999999987765


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +...+.......+|-                                                  -.+.++.++|+++|.
T Consensus       262 ~Lr~rvl~gk~rIp~--------------------------------------------------~ms~dce~lLrk~lv  291 (596)
T KOG0586|consen  262 ELRPRVLRGKYRIPF--------------------------------------------------YMSCDCEDLLRKFLV  291 (596)
T ss_pred             cccchheeeeecccc--------------------------------------------------eeechhHHHHHHhhc
Confidence            554444333332222                                                  346778999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCCC
Q 015867          377 YDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||.+|++.+++..|.|.....
T Consensus       292 l~Pskr~~~dqim~~~W~n~~~  313 (596)
T KOG0586|consen  292 LNPSKRGPCDQIMKDRWRNDLL  313 (596)
T ss_pred             cCccccCCHHHhhhhcccchhh
Confidence            9999999999999999987654

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=100.00  E-value=4.6e-42  Score=314.48  Aligned_cols=253  Identities=26%  Similarity=0.480  Sum_probs=204.8

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      +|+..+.||+|+||.||++.+..+++.||+|++....       .....+..|+++++.+.      |+|++++++++.+
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~   74 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLN------HPHIIRMLGATCE   74 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcC------CCceehhhceecc
Confidence            4888899999999999999999999999999986432       12345667888888775      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..++||||+ +++|.+++.+.+  .+++..+..++.||+.||.|||++|++|+||||+||+++.              
T Consensus        75 ~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~--------------  138 (268)
T cd06630          75 DSHFNLFVEWMAGGSVSHLLSKYG--AFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS--------------  138 (268)
T ss_pred             CCeEEEEEeccCCCcHHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--------------
Confidence            99999999999 899999998765  5899999999999999999999999999999999999943              


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                               .+..++|+|||.+......       .....|+..|+|||++.+..++.++|+||||+++|+|++|..||.
T Consensus       139 ---------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~  209 (268)
T cd06630         139 ---------TGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWN  209 (268)
T ss_pred             ---------CCCEEEEcccccccccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCC
Confidence                     2346999999987653321       223568899999999998899999999999999999999999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+.......+.......                                             .....++.++.++.+++
T Consensus       210 ~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~i  244 (268)
T cd06630         210 AEKHSNHLALIFKIASAT---------------------------------------------TAPSIPEHLSPGLRDVT  244 (268)
T ss_pred             CCCCcchHHHHHHHhccC---------------------------------------------CCCCCchhhCHHHHHHH
Confidence            544332222222111000                                             00011234677889999


Q ss_pred             HHccccCCCCCCCHHHHhCCcccc
Q 015867          372 HGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      .+||..||.+|||+.++++||||+
T Consensus       245 ~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         245 LRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             HHHcCCCcccCcCHHHHhcCcccC
Confidence            999999999999999999999995

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=100.00  E-value=6.9e-42  Score=315.43  Aligned_cols=250  Identities=27%  Similarity=0.441  Sum_probs=196.6

Q ss_pred             eeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEc
Q 015867           73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE  148 (399)
Q Consensus        73 ~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e  148 (399)
                      .||+|+||.||+|.+..+++.||+|.+....    ........|..+++.+..   ..|++++.+++.+...+..++|||
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~i~~~~~~~~~~~~~~~v~e   77 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMSYAFHTPDKLSFILD   77 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHh---CCCCcEeeeeeeeecCCEEEEEEe
Confidence            4899999999999998899999999986532    111223344444444433   467999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCC
Q 015867          149 KL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP  227 (399)
Q Consensus       149 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~  227 (399)
                      |+ |++|.+++...+  .+++..++.++.|++.||+|||+.+|+||||||+||++                        +
T Consensus        78 ~~~g~~L~~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili------------------------~  131 (278)
T cd05606          78 LMNGGDLHYHLSQHG--VFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL------------------------D  131 (278)
T ss_pred             cCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEE------------------------C
Confidence            99 999999987655  69999999999999999999999999999999999999                        3


Q ss_pred             CCCceEEeecCCcccCC-CCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Q 015867          228 KSSAIKLIDFGSTAFDN-QNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA  305 (399)
Q Consensus       228 ~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~  305 (399)
                      .++.++|+|||++.... .......|+..|+|||++.+. .++.++|+||+|+++|+|++|..||...............
T Consensus       132 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~  211 (278)
T cd05606         132 EHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT  211 (278)
T ss_pred             CCCCEEEccCcCccccCccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHh
Confidence            46679999999876432 223455799999999999754 6899999999999999999999999765322111100000


Q ss_pred             hCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC--
Q 015867          306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL--  383 (399)
Q Consensus       306 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~--  383 (399)
                      ..                     ...                          ..+..++.++.++|.+||..||.+|+  
T Consensus       212 ~~---------------------~~~--------------------------~~~~~~s~~~~~li~~~l~~~p~~R~~~  244 (278)
T cd05606         212 LT---------------------MAV--------------------------ELPDSFSPELRSLLEGLLQRDVNRRLGC  244 (278)
T ss_pred             hc---------------------cCC--------------------------CCCCcCCHHHHHHHHHHhhcCHHhccCC
Confidence            00                     000                          11224577889999999999999999  


Q ss_pred             ---CHHHHhCCccccCCC
Q 015867          384 ---TARQALNHPFFRNLN  398 (399)
Q Consensus       384 ---t~~ell~hp~f~~~~  398 (399)
                         ++.++++||||+.++
T Consensus       245 ~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         245 LGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             CCCCHHHHHhCccccCCC
Confidence               999999999998864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=3.9e-42  Score=315.19  Aligned_cols=248  Identities=25%  Similarity=0.396  Sum_probs=197.7

Q ss_pred             CCEEEEeee--ccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKM--GEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~l--G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|.+.+.+  |+|+||.||++.+..++..+|+|.+......    ..|..+...+.     .|+|++++++.+...+..
T Consensus        14 ~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~----~~e~~~~~~~~-----~h~~iv~~~~~~~~~~~~   84 (267)
T PHA03390         14 KNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN----AIEPMVHQLMK-----DNPNFIKLYYSVTTLKGH   84 (267)
T ss_pred             HhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc----hhhHHHHHHhh-----cCCCEEEEEEEEecCCee
Confidence            457777766  9999999999999999999999998653211    11333332222     479999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||||+ +++|.+++....  .+++..+..++.||+.||.|||+.|++||||||+||++..                  
T Consensus        85 ~iv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~------------------  144 (267)
T PHA03390         85 VLIMDYIKDGDLFDLLKKEG--KLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR------------------  144 (267)
T ss_pred             EEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC------------------
Confidence            9999999 999999998765  6999999999999999999999999999999999999943                  


Q ss_pred             cccCCCCC-ceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH-HH
Q 015867          223 FRCLPKSS-AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH-LA  300 (399)
Q Consensus       223 ~~~~~~~~-~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~-~~  300 (399)
                            ++ .++|+|||.+...... ....|+..|+|||++.+..++.++|+||||+++|+|++|..||......+. ..
T Consensus       145 ------~~~~~~l~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~  217 (267)
T PHA03390        145 ------AKDRIYLCDYGLCKIIGTP-SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLE  217 (267)
T ss_pred             ------CCCeEEEecCccceecCCC-ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHH
Confidence                  33 7999999987654432 345689999999999998999999999999999999999999985543221 11


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+.....                                               ......+.++..+.+||.+||+.||.
T Consensus       218 ~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~  250 (267)
T PHA03390        218 SLLKRQQ-----------------------------------------------KKLPFIKNVSKNANDFVQSMLKYNIN  250 (267)
T ss_pred             HHHHhhc-----------------------------------------------ccCCcccccCHHHHHHHHHHhccChh
Confidence            1111000                                               00011235678899999999999999


Q ss_pred             CCCC-HHHHhCCccccC
Q 015867          381 ERLT-ARQALNHPFFRN  396 (399)
Q Consensus       381 ~R~t-~~ell~hp~f~~  396 (399)
                      +|++ ++++|+||||++
T Consensus       251 ~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        251 YRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             hCCchHHHHhcCCcccC
Confidence            9996 599999999974

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-42  Score=340.51  Aligned_cols=244  Identities=30%  Similarity=0.416  Sum_probs=201.0

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee-ecc---C-
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW-FDY---R-  140 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~-~~~---~-  140 (399)
                      +++|.+.|.+|||+.||+|.+...|..||+|.+-... .......+|+++++.|.     +|+|||.+++. ...   . 
T Consensus        38 ~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~-----gh~nIV~yidss~~~~~~~~  112 (738)
T KOG1989|consen   38 RVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLS-----GHKNIVSYIDSSAINRSSNN  112 (738)
T ss_pred             EEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhc-----CCCceeeEeccccccccCCC
Confidence            6899999999999999999998888999999986543 33456778999999998     68999999983 221   1 


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccCCCCcC
Q 015867          141 --NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       141 --~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                        -.+.|+|||| ||+|-+++..+....|++..+.+|+.|+++|+.+||...  |||||||-+||||             
T Consensus       113 ~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLl-------------  179 (738)
T KOG1989|consen  113 GVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLL-------------  179 (738)
T ss_pred             ceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEE-------------
Confidence              2578999999 799999999877667999999999999999999999998  9999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCCC-c-----------ccccCCCccchhhhh---CCCCCCcchhHHHHHHH
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-S-----------SIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCIL  280 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~-----------~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il  280 (399)
                                 ..++..||||||++...-... +           ...-|+.|+|||++.   +.+.++|+|||+|||+|
T Consensus       180 -----------s~~g~~KLCDFGSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclL  248 (738)
T KOG1989|consen  180 -----------SADGNYKLCDFGSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLL  248 (738)
T ss_pred             -----------cCCCCEEeCcccccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHH
Confidence                       456789999999876532222 1           113589999999985   67899999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccc
Q 015867          281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV  360 (399)
Q Consensus       281 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (399)
                      |-|+....||+......    |......+|                                                ..
T Consensus       249 YkLCy~t~PFe~sg~la----Ilng~Y~~P------------------------------------------------~~  276 (738)
T KOG1989|consen  249 YKLCYFTTPFEESGKLA----ILNGNYSFP------------------------------------------------PF  276 (738)
T ss_pred             HHHHHhCCCcCcCccee----EEeccccCC------------------------------------------------CC
Confidence            99999999998654322    222222222                                                22


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          361 DRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       361 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      ++++..+.+||..||+.||.+||++-+++.+
T Consensus       277 p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  277 PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence            6789999999999999999999999988764

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=100.00  E-value=1.7e-41  Score=320.76  Aligned_cols=281  Identities=28%  Similarity=0.501  Sum_probs=218.6

Q ss_pred             CEEEEeeeccccceEEEEEEEccC--CeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec---
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQT--QERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD---  138 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~--~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~---  138 (399)
                      +|++.+.||+|+||.||++.+..+  +..||+|.+....   ........|+.+++.+.     +|+||+++++.+.   
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~~   75 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFR-----GHKNITCLYDMDIVFP   75 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhc-----CCCChheeeeeeeecc
Confidence            489999999999999999999877  8899999986421   12345667888888774     3689999988643   


Q ss_pred             -cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 -YRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 -~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                       .....+++|++++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++              
T Consensus        76 ~~~~~~~~~~e~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~--------------  139 (332)
T cd07857          76 GNFNELYLYEELMEADLHQIIRSGQ--PLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN--------------  139 (332)
T ss_pred             ccCCcEEEEEecccCCHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc--------------
Confidence             235689999999889999997655  699999999999999999999999999999999999993              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC-------CCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ-------NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                .++.++|+|||.+.....       ......||..|+|||++.+ ..++.++|+|||||++|+|++|.+|
T Consensus       140 ----------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~p  209 (332)
T cd07857         140 ----------ADCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPV  209 (332)
T ss_pred             ----------CCCCEEeCcCCCceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcC
Confidence                      466799999998864321       1233578999999998876 4789999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |...+....+..+....+.++..............+... ...++.                  .......+..+..+.+
T Consensus       210 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------------~~~~~~~~~~~~~~~~  270 (332)
T cd07857         210 FKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRS-LPNIPK------------------KPFESIFPNANPLALD  270 (332)
T ss_pred             CCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHh-ccccCC------------------cchHhhCCCCCHHHHH
Confidence            999888889999999888877766554422111000000 000000                  0001112345778999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+||+.||.+|||+.+++.||||...
T Consensus       271 li~~~l~~~P~~R~t~~~ll~~~~~~~~  298 (332)
T cd07857         271 LLEKLLAFDPTKRISVEEALEHPYLAIW  298 (332)
T ss_pred             HHHHHccCCcccCCCHHHHhcChhhhhh
Confidence            9999999999999999999999999754

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=100.00  E-value=1e-41  Score=323.59  Aligned_cols=281  Identities=26%  Similarity=0.458  Sum_probs=209.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC---
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR---  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~---  140 (399)
                      ..+|++.+.||.|+||.||+|.+..+++.||+|.+.... ........|+++++.+.      |+||+++++.+...   
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~------h~~i~~~~~~~~~~~~~   77 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLD------HDNIVKVYEVLGPSGSD   77 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcC------CCcchhhHhhhcccccc
Confidence            468999999999999999999999999999999986432 22345667888888775      58999998766543   


Q ss_pred             -----------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccccc
Q 015867          141 -----------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK  209 (399)
Q Consensus       141 -----------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~  209 (399)
                                 ...|+||||++++|.+++...   .+++..++.++.||+.||.|||+.||+||||||+||+++.     
T Consensus        78 ~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~-----  149 (342)
T cd07854          78 LTEDVGSLTELNSVYIVQEYMETDLANVLEQG---PLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT-----  149 (342)
T ss_pred             cccccccccccceEEEEeecccccHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC-----
Confidence                       367999999987999888654   4899999999999999999999999999999999999942     


Q ss_pred             CCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHH
Q 015867          210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVE  282 (399)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~e  282 (399)
                                        .+..++|+|||.+......      .....|+..|+|||++.+ ..++.++|||||||++|+
T Consensus       150 ------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~e  211 (342)
T cd07854         150 ------------------EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAE  211 (342)
T ss_pred             ------------------CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHH
Confidence                              3457899999988653221      122357889999998754 568899999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh
Q 015867          283 LCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR  362 (399)
Q Consensus       283 ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (399)
                      |++|+.||.+.+..+....+..........................   .++                 .........+.
T Consensus       212 l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~~~~~~~~~  271 (342)
T cd07854         212 MLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRND---GGE-----------------PRRPLRDLLPG  271 (342)
T ss_pred             HHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc---ccc-----------------cCCCHHHHccC
Confidence            9999999988877666665554433322221111110000000000   000                 00001112245


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       363 ~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ++.++.+||.+||+.||.+|||+.++++||||+..
T Consensus       272 ~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~  306 (342)
T cd07854         272 VNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCY  306 (342)
T ss_pred             CCHHHHHHHHHHhCCCchhccCHHHHhCCCccccc
Confidence            67889999999999999999999999999999753

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=7.2e-42  Score=312.30  Aligned_cols=244  Identities=28%  Similarity=0.460  Sum_probs=201.6

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      ||.|+||.||+|.+..+++.||+|++....    .....+..|+++++.+.      |+||+++++.+.+....++||||
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~   74 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECN------HPFIVKLYRTFKDKKYIYMLMEY   74 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCC------CCCEeeeeeeEEcCCccEEEEec
Confidence            699999999999999899999999986532    23355677777777765      59999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      + +++|.+++.+..  .++...+..++.||+.||+|||+.|++|+||||+||+++                        .
T Consensus        75 ~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~------------------------~  128 (262)
T cd05572          75 CLGGELWTILRDRG--LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD------------------------S  128 (262)
T ss_pred             CCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc------------------------C
Confidence            9 999999998765  589999999999999999999999999999999999993                        4


Q ss_pred             CCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHH
Q 015867          229 SSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE--NLEHLAMMER  304 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~--~~~~~~~i~~  304 (399)
                      ++.++|+|||.+......  .....|+..|++||.+.+..++.++|+||||+++|+|++|..||...+  ..+....+..
T Consensus       129 ~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~  208 (262)
T cd05572         129 NGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILK  208 (262)
T ss_pred             CCCEEEeeCCcccccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhc
Confidence            667999999987764332  334578999999999988889999999999999999999999998765  3333332221


Q ss_pred             HhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCC
Q 015867          305 ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT  384 (399)
Q Consensus       305 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  384 (399)
                      ...                      ..                          ..+...+.++.+||.+||..||.+|+|
T Consensus       209 ~~~----------------------~~--------------------------~~~~~~~~~~~~~i~~~l~~~p~~R~~  240 (262)
T cd05572         209 GNG----------------------KL--------------------------EFPNYIDKAAKDLIKQLLRRNPEERLG  240 (262)
T ss_pred             cCC----------------------CC--------------------------CCCcccCHHHHHHHHHHccCChhhCcC
Confidence            000                      00                          111234677899999999999999999


Q ss_pred             -----HHHHhCCccccCC
Q 015867          385 -----ARQALNHPFFRNL  397 (399)
Q Consensus       385 -----~~ell~hp~f~~~  397 (399)
                           ++|+++||||++.
T Consensus       241 ~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         241 NLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             CcccCHHHHhcChhhhCC
Confidence                 9999999999975

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=100.00  E-value=9.2e-42  Score=310.36  Aligned_cols=246  Identities=27%  Similarity=0.430  Sum_probs=203.8

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +|++.+.||.|+||.||++.+..+++.||+|.++..  .........|..+++.+.      |+|++++++.+..++..|
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~   74 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMK------HPNIVAFKESFEADGHLY   74 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCC------CCCcceEEEEEEECCEEE
Confidence            589999999999999999999999999999998642  233345666777777764      589999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++                    
T Consensus        75 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~--------------------  134 (255)
T cd08219          75 IVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT--------------------  134 (255)
T ss_pred             EEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC--------------------
Confidence            999999 89999998775555689999999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                          .++.++|+|||.+.....   ......|++.|+|||++.+..++.++|+||||+++|+|++|..||...+......
T Consensus       135 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~  210 (255)
T cd08219         135 ----QNGKVKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLIL  210 (255)
T ss_pred             ----CCCcEEEcccCcceeecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHH
Confidence                466799999998765322   2234678999999999999899999999999999999999999998766555444


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+......                                                 ..+..++..+.+||.+||+.||.
T Consensus       211 ~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~~l~~~P~  241 (255)
T cd08219         211 KVCQGSYK-------------------------------------------------PLPSHYSYELRSLIKQMFKRNPR  241 (255)
T ss_pred             HHhcCCCC-------------------------------------------------CCCcccCHHHHHHHHHHHhCCcc
Confidence            43221110                                                 01123566788999999999999


Q ss_pred             CCCCHHHHhCC
Q 015867          381 ERLTARQALNH  391 (399)
Q Consensus       381 ~R~t~~ell~h  391 (399)
                      +|||+.++++-
T Consensus       242 ~Rp~~~~il~~  252 (255)
T cd08219         242 SRPSATTILSR  252 (255)
T ss_pred             cCCCHHHHhhc
Confidence            99999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=100.00  E-value=5.1e-42  Score=312.56  Aligned_cols=249  Identities=26%  Similarity=0.420  Sum_probs=204.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +|++.+.||.|+||.||+|.+..+++.||+|++....    ...+.+..|+++++.+.      |||++.+++.+...+.
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~   74 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELN------HPFLVNLWYSFQDEEN   74 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCC------CCChHHHHHhhcCCCe
Confidence            4899999999999999999999899999999997532    23355666777777764      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ |++|.+++....  .+++..+..++.||+.||.|||++|++|+||||+||++                   
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~-------------------  133 (258)
T cd05578          75 MYLVVDLLLGGDLRYHLSQKV--KFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILL-------------------  133 (258)
T ss_pred             EEEEEeCCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE-------------------
Confidence            99999999 999999998763  69999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           +.++.++|+|||.+......  .....|+..|+|||++.+..++.++|+||||+++|+|++|..||...+.....
T Consensus       134 -----~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~  208 (258)
T cd05578         134 -----DEQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRD  208 (258)
T ss_pred             -----cCCCCEEEeecccccccCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHH
Confidence                 34667999999987654332  23456889999999999888999999999999999999999999876642111


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ........                                               .....++..+.++.++|.+||..||
T Consensus       209 ~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~~i~~~l~~~p  241 (258)
T cd05578         209 QIRAKQET-----------------------------------------------ADVLYPATWSTEAIDAINKLLERDP  241 (258)
T ss_pred             HHHHHhcc-----------------------------------------------ccccCcccCcHHHHHHHHHHccCCh
Confidence            11111000                                               0001123456788999999999999


Q ss_pred             CCCCCH--HHHhCCccc
Q 015867          380 SERLTA--RQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~--~ell~hp~f  394 (399)
                      .+||++  .|+++||||
T Consensus       242 ~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         242 QKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             hHcCCccHHHHhcCCCC
Confidence            999999  999999998

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=100.00  E-value=1.1e-41  Score=318.13  Aligned_cols=253  Identities=20%  Similarity=0.276  Sum_probs=196.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEcc----------------CCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQ----------------TQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGG  126 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~----------------~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~  126 (399)
                      .++|++.++||+|+||.||+|.+..                ++..||+|++...  ......+..|++++..+.      
T Consensus         4 ~~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------   77 (304)
T cd05096           4 RGHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLK------   77 (304)
T ss_pred             hhhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcC------
Confidence            3579999999999999999997532                3457999998653  223445777888887775      


Q ss_pred             CcceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCC-----------------CCCCHHHHHHHHHHHHHHHHHHHHC
Q 015867          127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY-----------------CPFPVDLVREFGRQLLESVAYMHDL  188 (399)
Q Consensus       127 ~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----------------~~~~~~~~~~i~~qi~~~L~~lH~~  188 (399)
                      |+||+++++++.+.+..++||||+ +++|.+++.....                 ..+++..+..++.||+.||.|||+.
T Consensus        78 h~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~  157 (304)
T cd05096          78 DPNIIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL  157 (304)
T ss_pred             CCCeeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC
Confidence            599999999999999999999999 9999999865321                 1367788899999999999999999


Q ss_pred             CccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhh
Q 015867          189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVIL  263 (399)
Q Consensus       189 givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~  263 (399)
                      ||+||||||+|||++                        .++.+||+|||++......     .+...++..|+|||++.
T Consensus       158 ~ivH~dlkp~Nill~------------------------~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~  213 (304)
T cd05096         158 NFVHRDLATRNCLVG------------------------ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECIL  213 (304)
T ss_pred             CccccCcchhheEEc------------------------CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHh
Confidence            999999999999994                        4667999999988653221     12345578899999999


Q ss_pred             CCCCCCcchhHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchH
Q 015867          264 GLGWSYPCDMWSVGCILVELCT--GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRE  341 (399)
Q Consensus       264 ~~~~~~~~DiwslG~il~ell~--g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  341 (399)
                      +..++.++||||||+++|+|++  +..||...+..+....+.........                              
T Consensus       214 ~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------------------------  263 (304)
T cd05096         214 MGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGR------------------------------  263 (304)
T ss_pred             cCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccc------------------------------
Confidence            8899999999999999999987  66788776655544433221100000                              


Q ss_pred             HHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHh
Q 015867          342 SIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL  389 (399)
Q Consensus       342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell  389 (399)
                                  ......++.++..+.+||.+||..||.+|||+.+|.
T Consensus       264 ------------~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         264 ------------QVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             ------------cccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence                        000011235677889999999999999999999994

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2e-41  Score=309.11  Aligned_cols=252  Identities=29%  Similarity=0.445  Sum_probs=206.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ++|++.+.||.|+||.||+|.+..+++.+++|++..... ....+..|+++++.+.      |+|++++++.+.+.+..|
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~   76 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECR------HPNIVAYFGSYLRRDKLW   76 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCC------CCChhceEEEEEeCCEEE
Confidence            579999999999999999999988899999999875322 3355667777777764      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++|||+ +++|.+++..... .+++..+..++.|++.||.|||+.||+|+||||+||+++                    
T Consensus        77 l~~e~~~~~~l~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~--------------------  135 (262)
T cd06613          77 IVMEYCGGGSLQDIYQVTRG-PLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT--------------------  135 (262)
T ss_pred             EEEeCCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC--------------------
Confidence            999999 8899999877522 599999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                          .++.++|+|||.+.....   ......++..|+|||.+.+.   .++.++|+||||+++|+|++|..||...+...
T Consensus       136 ----~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~  211 (262)
T cd06613         136 ----EDGDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMR  211 (262)
T ss_pred             ----CCCCEEECccccchhhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                466799999998765332   22345788999999999877   88999999999999999999999998766555


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+.......+.                                             ......++.++.+||.+||..
T Consensus       212 ~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~li~~~l~~  246 (262)
T cd06613         212 ALFLISKSNFPPPK---------------------------------------------LKDKEKWSPVFHDFIKKCLTK  246 (262)
T ss_pred             HHHHHHhccCCCcc---------------------------------------------ccchhhhhHHHHHHHHHHcCC
Confidence            44433221110000                                             001134567789999999999


Q ss_pred             CCCCCCCHHHHhCCcc
Q 015867          378 DPSERLTARQALNHPF  393 (399)
Q Consensus       378 dP~~R~t~~ell~hp~  393 (399)
                      ||.+|||+.+++.|||
T Consensus       247 ~p~~Rpt~~~il~~~~  262 (262)
T cd06613         247 DPKKRPTATKLLQHPF  262 (262)
T ss_pred             ChhhCCCHHHHhcCCC
Confidence            9999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=100.00  E-value=1.6e-41  Score=316.49  Aligned_cols=282  Identities=31%  Similarity=0.506  Sum_probs=217.4

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      +...++|++.+.||.|+||.||+|.+..+++.||+|.++...   ........|+++++.+.      |+|++++++++.
T Consensus         3 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~------h~~i~~~~~~~~   76 (302)
T cd07864           3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLN------HRNIVNLKEIVT   76 (302)
T ss_pred             hhhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCC------CCCeeeeeheec
Confidence            345578999999999999999999999899999999986532   22234556777777775      599999999887


Q ss_pred             cCC----------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          139 YRN----------HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       139 ~~~----------~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      +..          .+++||||+++++.+.+.+.. ..+++..+..++.||+.||+|||+.||+|+||||+||++      
T Consensus        77 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili------  149 (302)
T cd07864          77 DKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGL-VHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILL------  149 (302)
T ss_pred             CcchhhhccccCCcEEEEEcccCccHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE------
Confidence            654          899999999778888887653 268999999999999999999999999999999999999      


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHH
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el  283 (399)
                                        +.++.+||+|||.+.......    ....++..|+|||++.+. .++.++|||||||++|+|
T Consensus       150 ------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el  211 (302)
T cd07864         150 ------------------NNKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGEL  211 (302)
T ss_pred             ------------------CCCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHH
Confidence                              456779999999886543221    223567889999998754 578999999999999999


Q ss_pred             HhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhh
Q 015867          284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA  363 (399)
Q Consensus       284 l~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (399)
                      ++|++||...+..+.+..+....+..+...++...+.........     .               .............+
T Consensus       212 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---------------~~~~~~~~~~~~~~  271 (302)
T cd07864         212 FTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKP-----K---------------KQYRRRLREEFSFI  271 (302)
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccccccccccc-----c---------------cccccchhhhcCCC
Confidence            999999998888888888888777666555443322111000000     0               00000000112245


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          364 RSTLTDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       364 ~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      +..+.+||.+||+.||.+|||+.++++||||
T Consensus       272 ~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         272 PTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence            7788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-41  Score=313.79  Aligned_cols=276  Identities=32%  Similarity=0.527  Sum_probs=215.1

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC--Ce
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR--NH  142 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~--~~  142 (399)
                      |++.+.||.|+||.||+|.+..+++.+|+|.+....   .....+..|+++++.+.      |+|++++++++...  +.
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~   74 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLR------HPNIVRLKEIVTSKGKGS   74 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhcc------CCCeeeheeeEecCCCCc
Confidence            688999999999999999999999999999997642   23345667888888875      59999999999887  89


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .++||||++++|.+++.... ..+++..+..++.||+.||+|||++|++|+||||+||++                    
T Consensus        75 ~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~--------------------  133 (287)
T cd07840          75 IYMVFEYMDHDLTGLLDSPE-VKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILI--------------------  133 (287)
T ss_pred             EEEEeccccccHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE--------------------
Confidence            99999999779999987653 269999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                          +.++.++|+|||.+......    .....++..|+|||.+.+ ..++.++||||||+++|+|++|..||...+...
T Consensus       134 ----~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~  209 (287)
T cd07840         134 ----NNDGVLKLADFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELE  209 (287)
T ss_pred             ----cCCCCEEEccccceeeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                44677999999987654332    233457889999998765 468899999999999999999999999988888


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh-hhhHHHHHHHHccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR-ARSTLTDLLHGLLR  376 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L~  376 (399)
                      ....+....+.++...+........          +          ................... ++..+.++|.+||.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~  269 (287)
T cd07840         210 QLEKIFELCGSPTDENWPGVSKLPW----------F----------ENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLT  269 (287)
T ss_pred             HHHHHHHHhCCCchhhccccccchh----------h----------hhccccccchhHHHHHhcccCCHHHHHHHHHHcC
Confidence            8888877766655443332211100          0          0000000000000011112 47889999999999


Q ss_pred             cCCCCCCCHHHHhCCccc
Q 015867          377 YDPSERLTARQALNHPFF  394 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f  394 (399)
                      .||.+|||+.++++||||
T Consensus       270 ~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         270 LDPKKRISADQALQHEYF  287 (287)
T ss_pred             CChhhCcCHHHHhhCcCC
Confidence            999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=100.00  E-value=1.8e-41  Score=317.27  Aligned_cols=279  Identities=28%  Similarity=0.471  Sum_probs=212.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--  139 (399)
                      .++|++.+.||.|+||.||+|.+..+++.||||.+.....   .......|+++++.+.      |+||+++++++..  
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~   80 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLK------HPNVVPLIDMAVERP   80 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcC------CCCccchhhheeccc
Confidence            5789999999999999999999999999999999864321   1234566888888775      5899999887643  


Q ss_pred             ------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 ------RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                            ...+++||||++++|.+.+.... ..+++..+..++.||+.||.|||++||+|+||||+||++           
T Consensus        81 ~~~~~~~~~~~lv~~~~~~~l~~~~~~~~-~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~-----------  148 (311)
T cd07866          81 DKSKRKRGSVYMVTPYMDHDLSGLLENPS-VKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILI-----------  148 (311)
T ss_pred             ccccccCceEEEEEecCCcCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE-----------
Confidence                  33579999999878888876543 269999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC--------------CcccccCCCccchhhhhCC-CCCCcchhHHHHH
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--------------HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGC  278 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--------------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~  278 (399)
                                   +.++.++|+|||++......              .....|++.|+|||.+.+. .++.++||||||+
T Consensus       149 -------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~  215 (311)
T cd07866         149 -------------DNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGC  215 (311)
T ss_pred             -------------CCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHH
Confidence                         44677999999987542211              1233578889999998754 5899999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          279 ILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       279 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      ++|+|++|.+||.+.+.......+....+.+++..+........... .......+                   .....
T Consensus       216 il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------------~~~~~  275 (311)
T cd07866         216 VFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEG-VHSFTNYP-------------------RTLEE  275 (311)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccc-cccCCCCC-------------------ccHHH
Confidence            99999999999999888888888887777665544332211110000 00000000                   00001


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ....++..+.+||.+||+.||.+|||+.|+++||||
T Consensus       276 ~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         276 RFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             HcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            123445778999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=100.00  E-value=1.7e-41  Score=311.58  Aligned_cols=252  Identities=28%  Similarity=0.441  Sum_probs=201.0

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-----------hhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-----------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      +|.+.+.||.|+||.||+|.+..+++.||||.++....           ....+..|+.+++.+.      |+|++++++
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~   75 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLD------HLNIVQYLG   75 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcC------CCCcceEEE
Confidence            58999999999999999999988999999998853211           1123455666666664      699999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      ++...+..++||||+ +++|.+++.+.+  .+++..+..++.||+.||.|||++|++|+||||+||++            
T Consensus        76 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~------------  141 (272)
T cd06629          76 FETTEEYLSIFLEYVPGGSIGSCLRTYG--RFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLV------------  141 (272)
T ss_pred             EeccCCceEEEEecCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEE------------
Confidence            999999999999999 999999998765  69999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCC--CCCcchhHHHHHHHHHHHhCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLG--WSYPCDMWSVGCILVELCTGE  287 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~ell~g~  287 (399)
                                  +.++.++|+|||.+......     .....|+..|+|||.+....  ++.++|+||||+++|++++|.
T Consensus       142 ------------~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~  209 (272)
T cd06629         142 ------------DADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGR  209 (272)
T ss_pred             ------------cCCCeEEEeeccccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCC
Confidence                        34678999999987653321     23346889999999987654  899999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHH
Q 015867          288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL  367 (399)
Q Consensus       288 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (399)
                      .||...+..+....+.....                      ...++.                      .....++..+
T Consensus       210 ~p~~~~~~~~~~~~~~~~~~----------------------~~~~~~----------------------~~~~~~~~~~  245 (272)
T cd06629         210 RPWSDEEAIAAMFKLGNKRS----------------------APPIPP----------------------DVSMNLSPVA  245 (272)
T ss_pred             CCCcCcchHHHHHHhhcccc----------------------CCcCCc----------------------cccccCCHHH
Confidence            99976554433322211100                      000110                      1113457788


Q ss_pred             HHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          368 TDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      .+||.+||..||.+|||+.++++||||
T Consensus       246 ~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         246 LDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             HHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=100.00  E-value=3.5e-42  Score=319.62  Aligned_cols=252  Identities=27%  Similarity=0.455  Sum_probs=204.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +.|.....||+|+||.||++.+..++..||||.+.... .....+..|+.+++.+.      |+|++++++.+...+..+
T Consensus        22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~------h~~ii~~~~~~~~~~~~~   95 (292)
T cd06658          22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH------HENVVDMYNSYLVGDELW   95 (292)
T ss_pred             HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCC------CCcHHHHHHheecCCeEE
Confidence            34666788999999999999998899999999986422 23344666777776664      699999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+||||||+||+++                    
T Consensus        96 lv~e~~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~--------------------  152 (292)
T cd06658          96 VVMEFLEGGALTDIVTHT---RMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT--------------------  152 (292)
T ss_pred             EEEeCCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc--------------------
Confidence            999999 88999988643   489999999999999999999999999999999999993                    


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                          .++.++|+|||++.....   ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+......
T Consensus       153 ----~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~  228 (292)
T cd06658         153 ----SDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMR  228 (292)
T ss_pred             ----CCCCEEEccCcchhhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                456799999998764322   2234578999999999998899999999999999999999999998766555444


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+........                                               .....++..+.+||.+||..||.
T Consensus       229 ~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~P~  261 (292)
T cd06658         229 RIRDNLPPRV-----------------------------------------------KDSHKVSSVLRGFLDLMLVREPS  261 (292)
T ss_pred             HHHhcCCCcc-----------------------------------------------ccccccCHHHHHHHHHHccCChh
Confidence            3322111000                                               01123567789999999999999


Q ss_pred             CCCCHHHHhCCccccCC
Q 015867          381 ERLTARQALNHPFFRNL  397 (399)
Q Consensus       381 ~R~t~~ell~hp~f~~~  397 (399)
                      +|||++++++||||...
T Consensus       262 ~Rpt~~~il~~~~~~~~  278 (292)
T cd06658         262 QRATAQELLQHPFLKLA  278 (292)
T ss_pred             HCcCHHHHhhChhhhcc
Confidence            99999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=100.00  E-value=1.2e-41  Score=313.51  Aligned_cols=250  Identities=28%  Similarity=0.448  Sum_probs=204.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..|+..+.||.|+||.||+|.+..++..||||++....  .....+..|+++++.+.      |++++++++.+.+.+..
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~   77 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCD------SPYVTKYYGSYLKGTKL   77 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCC------CCCEeeEEEEEEECCEE
Confidence            35889999999999999999999899999999986432  23345666777777664      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++...   .+++..+..++.|++.||+|||+.+++|+||+|+||+++                   
T Consensus        78 ~lv~e~~~~~~L~~~i~~~---~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~-------------------  135 (277)
T cd06640          78 WIIMEYLGGGSALDLLRAG---PFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS-------------------  135 (277)
T ss_pred             EEEEecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc-------------------
Confidence            9999999 89999998754   489999999999999999999999999999999999994                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           .++.++|+|||++......   .....++..|+|||++.+..++.++|+|||||++|+|++|..||...+.....
T Consensus       136 -----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~  210 (277)
T cd06640         136 -----EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVL  210 (277)
T ss_pred             -----CCCCEEEcccccceeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHh
Confidence                 4567999999987553321   23346888999999999889999999999999999999999999876544333


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+....   +                                              ......++..+.+||.+||+.||
T Consensus       211 ~~~~~~~---~----------------------------------------------~~~~~~~~~~~~~li~~~l~~~p  241 (277)
T cd06640         211 FLIPKNN---P----------------------------------------------PTLTGEFSKPFKEFIDACLNKDP  241 (277)
T ss_pred             hhhhcCC---C----------------------------------------------CCCchhhhHHHHHHHHHHcccCc
Confidence            2221100   0                                              01112456778899999999999


Q ss_pred             CCCCCHHHHhCCccccCC
Q 015867          380 SERLTARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~  397 (399)
                      .+||++.++++||||.+.
T Consensus       242 ~~Rp~~~~il~~~~~~~~  259 (277)
T cd06640         242 SFRPTAKELLKHKFIVKN  259 (277)
T ss_pred             ccCcCHHHHHhChHhhhc
Confidence            999999999999999764

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=100.00  E-value=2e-41  Score=310.25  Aligned_cols=248  Identities=29%  Similarity=0.451  Sum_probs=198.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-  139 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-  139 (399)
                      +|++.+.||+|+||.||+|.+..++..||+|.+....      .....+..|+.+++.+.      |+||+++++++.. 
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~   76 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQ------HERIVQYYGCLRDR   76 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcC------CCCeeeEEEEEEcC
Confidence            5899999999999999999999999999999986421      12234666788887775      5999999998765 


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          140 -RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       140 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                       ....+++|||+ +++|.+++....  .+++..+..++.|++.||+|||+.||+|+||||+||+++              
T Consensus        77 ~~~~~~l~~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~--------------  140 (266)
T cd06651          77 AEKTLTIFMEYMPGGSVKDQLKAYG--ALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD--------------  140 (266)
T ss_pred             CCCEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC--------------
Confidence             46889999999 889999998765  589999999999999999999999999999999999983              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                .++.++|+|||++.....      ......++..|+|||.+.+..++.++|+|||||++|+|++|+.||.
T Consensus       141 ----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~  210 (266)
T cd06651         141 ----------SAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWA  210 (266)
T ss_pred             ----------CCCCEEEccCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCcc
Confidence                      466799999998764322      1123468899999999999899999999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+.......+.....                      .                          ...+..++..+.+||
T Consensus       211 ~~~~~~~~~~~~~~~~----------------------~--------------------------~~~~~~~~~~~~~li  242 (266)
T cd06651         211 EYEAMAAIFKIATQPT----------------------N--------------------------PQLPSHISEHARDFL  242 (266)
T ss_pred             ccchHHHHHHHhcCCC----------------------C--------------------------CCCchhcCHHHHHHH
Confidence            6554333322211000                      0                          001123466778898


Q ss_pred             HHccccCCCCCCCHHHHhCCcccc
Q 015867          372 HGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                       +||..||.+|||++|+++||||+
T Consensus       243 -~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         243 -GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             -HHhcCChhhCcCHHHHhcCcccc
Confidence             57778999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=100.00  E-value=9.3e-43  Score=328.22  Aligned_cols=247  Identities=23%  Similarity=0.315  Sum_probs=201.7

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEec---chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ..+...+..+||+|+||+||+|++..+   ||||+++.   +......|..|+.+++.-+|      .||+.+.+++...
T Consensus       390 p~~ev~l~~rIGsGsFGtV~Rg~whGd---VAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH------~NIlLFMG~~~~p  460 (678)
T KOG0193|consen  390 PPEEVLLGERIGSGSFGTVYRGRWHGD---VAVKLLNVDDPTPEQLQAFKNEVAVLKKTRH------ENILLFMGACMNP  460 (678)
T ss_pred             CHHHhhccceeccccccceeecccccc---eEEEEEecCCCCHHHHHHHHHHHHHHhhcch------hhheeeehhhcCC
Confidence            345678899999999999999987544   99999974   33455678888888887764      8999999999988


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      .. .||..+| |.+|+.++...+. .|.....+.|++||+.|+.|||.++|||||||..|||+                 
T Consensus       461 ~~-AIiTqwCeGsSLY~hlHv~et-kfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl-----------------  521 (678)
T KOG0193|consen  461 PL-AIITQWCEGSSLYTHLHVQET-KFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFL-----------------  521 (678)
T ss_pred             ce-eeeehhccCchhhhhccchhh-hhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEE-----------------
Confidence            88 9999999 8899999987654 69999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccC-----CCCCcccccCCCccchhhhhC---CCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFD-----NQNHSSIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~-----~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                             ..++.|||+|||++...     ........|...|||||++..   .+|++.+||||||+++|||++|..||.
T Consensus       522 -------~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPys  594 (678)
T KOG0193|consen  522 -------HEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYS  594 (678)
T ss_pred             -------ccCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcC
Confidence                   45688999999987542     222345578899999999963   489999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+...++.++-++...+.                                             ......+++.++++|+
T Consensus       595 i~~~dqIifmVGrG~l~pd---------------------------------------------~s~~~s~~pk~mk~Ll  629 (678)
T KOG0193|consen  595 IQNRDQIIFMVGRGYLMPD---------------------------------------------LSKIRSNCPKAMKRLL  629 (678)
T ss_pred             CCChhheEEEecccccCcc---------------------------------------------chhhhccCHHHHHHHH
Confidence            5555444544433322111                                             1122346788999999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      ..||.+++++||++.+||.
T Consensus       630 ~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  630 SDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHHhcCcccCccHHHHHH
Confidence            9999999999999998875

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=100.00  E-value=1.7e-41  Score=308.62  Aligned_cols=250  Identities=26%  Similarity=0.440  Sum_probs=206.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|.+.+.||.|+||.||++.+..+|..||+|.+....   .....+..|+++++.+.      |+|++++++.+...+..
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~------h~~i~~~~~~~~~~~~~   74 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMK------HPNIVTFFASFQENGRL   74 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCC------CCChhhhhheeccCCeE
Confidence            5899999999999999999999999999999986532   23345667888888775      58999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++|+||+ +++|.+++.......+++..+..++.|++.||.|||+.+++|+||||+||+++.                  
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~------------------  136 (257)
T cd08225          75 FIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK------------------  136 (257)
T ss_pred             EEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC------------------
Confidence            9999999 999999998765556899999999999999999999999999999999999943                  


Q ss_pred             cccCCCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           .+..++|+|||.+.......   ....|++.|+|||++.+..++.++|+||||+++|+|++|..||...+..+..
T Consensus       137 -----~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~  211 (257)
T cd08225         137 -----NGMVAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLV  211 (257)
T ss_pred             -----CCCeEEecccccchhccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence                 23457999999876543322   2346899999999998888999999999999999999999999876554433


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+....  .                                               ....+.++.++.++|.+||..||
T Consensus       212 ~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~~~i~~~l~~~p  242 (257)
T cd08225         212 LKICQGY--F-----------------------------------------------APISPNFSRDLRSLISQLFKVSP  242 (257)
T ss_pred             HHHhccc--C-----------------------------------------------CCCCCCCCHHHHHHHHHHhccCh
Confidence            3222110  0                                               00113456778999999999999


Q ss_pred             CCCCCHHHHhCCccc
Q 015867          380 SERLTARQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~~ell~hp~f  394 (399)
                      .+|||+.++++||||
T Consensus       243 ~~Rpt~~~ll~~~~~  257 (257)
T cd08225         243 RDRPSITSILKRPFL  257 (257)
T ss_pred             hhCcCHHHHhhCCCC
Confidence            999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=1.3e-41  Score=314.34  Aligned_cols=237  Identities=14%  Similarity=0.159  Sum_probs=195.1

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchhh----hHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc----CCeE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY----RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY----RNHI  143 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~----~~~~  143 (399)
                      ..||+|++|.||+|..  +|+.||||+++.....    ...+..|+.++..+.      ||||+++++++.+    ....
T Consensus        26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv~~~g~~~~~~~~~~~~   97 (283)
T PHA02988         26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRID------SNNILKIYGFIIDIVDDLPRL   97 (283)
T ss_pred             eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcC------CCCEEEEeeeEEecccCCCce
Confidence            5699999999999976  6889999999754332    244567888888875      4899999998866    3578


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ++||||+ +|+|.+++...+  .+++.....++.|++.||.|||+. +++||||||+|||+                   
T Consensus        98 ~lv~Ey~~~g~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill-------------------  156 (283)
T PHA02988         98 SLILEYCTRGYLREVLDKEK--DLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLV-------------------  156 (283)
T ss_pred             EEEEEeCCCCcHHHHHhhCC--CCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEE-------------------
Confidence            9999999 999999998765  589999999999999999999984 99999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           +.++.+||+|||++...........||..|+|||++.+  ..++.++|||||||++|||++|..||...+..+..
T Consensus       157 -----~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~  231 (283)
T PHA02988        157 -----TENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIY  231 (283)
T ss_pred             -----CCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHH
Confidence                 45677999999998765444455678999999999976  68999999999999999999999999887766555


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......++                                                .+..++..+.+||.+||+.||
T Consensus       232 ~~i~~~~~~~~------------------------------------------------~~~~~~~~l~~li~~cl~~dp  263 (283)
T PHA02988        232 DLIINKNNSLK------------------------------------------------LPLDCPLEIKCIVEACTSHDS  263 (283)
T ss_pred             HHHHhcCCCCC------------------------------------------------CCCcCcHHHHHHHHHHhcCCc
Confidence            54432211100                                                112457788999999999999


Q ss_pred             CCCCCHHHHhC
Q 015867          380 SERLTARQALN  390 (399)
Q Consensus       380 ~~R~t~~ell~  390 (399)
                      .+|||+.|+++
T Consensus       264 ~~Rps~~ell~  274 (283)
T PHA02988        264 IKRPNIKEILY  274 (283)
T ss_pred             ccCcCHHHHHH
Confidence            99999999985

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=100.00  E-value=3.3e-41  Score=308.53  Aligned_cols=249  Identities=29%  Similarity=0.467  Sum_probs=200.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+|++.+.||+|+||.||.+.+..+++.||||.+....      .....+..|+.+++.+.      |+||+++++++.+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~   75 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLL------HERIVQYYGCLRD   75 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcC------CCCeeeEEeEecc
Confidence            36999999999999999999999999999999885321      12345666888888775      5999999998876


Q ss_pred             --CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          140 --RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       140 --~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                        ...+++||||+ +++|.+++.+..  .+++..+..++.|++.||+|||++||+|+||||+||+++             
T Consensus        76 ~~~~~~~~v~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~-------------  140 (265)
T cd06652          76 PMERTLSIFMEHMPGGSIKDQLKSYG--ALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD-------------  140 (265)
T ss_pred             CCCceEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec-------------
Confidence              35788999999 899999998765  588999999999999999999999999999999999983             


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCC------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQ------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                                 .++.++|+|||.+.....      ......|+..|+|||++.+..++.++|+|||||++|+|++|+.||
T Consensus       141 -----------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~  209 (265)
T cd06652         141 -----------SVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPW  209 (265)
T ss_pred             -----------CCCCEEECcCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCC
Confidence                       466799999998764221      223456899999999999888999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      ...+.......+..   ...                                             ....+..++..+.++
T Consensus       210 ~~~~~~~~~~~~~~---~~~---------------------------------------------~~~~~~~~~~~~~~~  241 (265)
T cd06652         210 AEFEAMAAIFKIAT---QPT---------------------------------------------NPVLPPHVSDHCRDF  241 (265)
T ss_pred             CccchHHHHHHHhc---CCC---------------------------------------------CCCCchhhCHHHHHH
Confidence            76544333322211   000                                             001123456778899


Q ss_pred             HHHccccCCCCCCCHHHHhCCcccc
Q 015867          371 LHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      |.+||. +|.+|||++++++|||+.
T Consensus       242 i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         242 LKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             HHHHhc-ChhhCCCHHHHhcCcccC
Confidence            999995 999999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=100.00  E-value=4.3e-42  Score=314.12  Aligned_cols=256  Identities=28%  Similarity=0.456  Sum_probs=204.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||.|+||.||++.+..+++.+|+|.+....  .....+..|+++++.+.      |+||+++++.+...+..
T Consensus         1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~   74 (265)
T cd06605           1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCN------SPYIVGFYGAFYNNGDI   74 (265)
T ss_pred             CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCC------CCchhhhheeeecCCEE
Confidence            35889999999999999999999999999999986542  23345666777777664      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+ .|++|+||||+||+++                  
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~------------------  135 (265)
T cd06605          75 SICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN------------------  135 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC------------------
Confidence            9999999 799999998763 369999999999999999999999 9999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC-CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc--HHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN-HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN--LEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~  298 (399)
                            .++.++|+|||.+...... .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.  ...
T Consensus       136 ------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~  209 (265)
T cd06605         136 ------SRGQIKLCDFGVSGQLVNSLAKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGI  209 (265)
T ss_pred             ------CCCCEEEeecccchhhHHHHhhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccH
Confidence                  4667999999987653221 1236789999999999999999999999999999999999999975421  111


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.......+.                                             ......++.++.+||.+||..|
T Consensus       210 ~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~~~~li~~~l~~~  244 (265)
T cd06605         210 FELLQYIVNEPPP---------------------------------------------RLPSGKFSPDFQDFVNLCLIKD  244 (265)
T ss_pred             HHHHHHHhcCCCC---------------------------------------------CCChhhcCHHHHHHHHHHcCCC
Confidence            1111111100000                                             0001126778899999999999


Q ss_pred             CCCCCCHHHHhCCccccCC
Q 015867          379 PSERLTARQALNHPFFRNL  397 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~  397 (399)
                      |.+|||+.+++.||||++-
T Consensus       245 p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         245 PRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             chhCcCHHHHhhCchhhcc
Confidence            9999999999999999864

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=100.00  E-value=2.7e-42  Score=292.54  Aligned_cols=251  Identities=24%  Similarity=0.322  Sum_probs=197.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC---
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR---  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~---  140 (399)
                      .+||+|.+.||+|||+-||++....+++.||+|.+.... ........|++..+.++      |||+++++++...+   
T Consensus        20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~------s~~vl~l~dh~l~~~~D   93 (302)
T KOG2345|consen   20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFN------SPNVLRLVDHQLREEKD   93 (302)
T ss_pred             CceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhC------CcchHHHHHHHHHhhcc
Confidence            468999999999999999999999999999999986543 33445556666666654      59999998876543   


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccCCCC
Q 015867          141 --NHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       141 --~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~~~~  213 (399)
                        ...||+++|+ .|+|.+.++..  +...+++..+..|+.+|+.||++||+..  +.||||||.|||+.          
T Consensus        94 ~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls----------  163 (302)
T KOG2345|consen   94 GKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS----------  163 (302)
T ss_pred             CceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec----------
Confidence              3699999999 99999999764  3336999999999999999999999999  99999999999994          


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCCC------------cccccCCCccchhhhh---CCCCCCcchhHHHHH
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------------SSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGC  278 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------------~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~  278 (399)
                                    ..+.++|+|||++....-.-            ..-..|..|+|||.+.   +...+.++|||||||
T Consensus       164 --------------~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGC  229 (302)
T KOG2345|consen  164 --------------DSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGC  229 (302)
T ss_pred             --------------CCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhH
Confidence                          35679999999876533211            1225799999999986   446789999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          279 ILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       279 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      +||.|+.|..||+..-.                      ..+...+--...++.||..                      
T Consensus       230 tLYa~mf~~sPfe~~~~----------------------~GgSlaLAv~n~q~s~P~~----------------------  265 (302)
T KOG2345|consen  230 TLYAMMFGESPFERIYQ----------------------QGGSLALAVQNAQISIPNS----------------------  265 (302)
T ss_pred             HHHHHHHcCCcchHHhh----------------------cCCeEEEeeeccccccCCC----------------------
Confidence            99999999999953111                      0111111222234455542                      


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                        ..+|..+.+||..||+.||.+||++.+++.+
T Consensus       266 --~~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  266 --SRYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             --CCccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence              3478889999999999999999999999864

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=100.00  E-value=2.5e-41  Score=308.64  Aligned_cols=252  Identities=27%  Similarity=0.467  Sum_probs=209.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +|++.+.||.|++|.||+|.+..+++.|++|++....  .....+..|+.++..+.      |+|++++++++...+..+
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~   75 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCE------SPYVVKCYGAFYKEGEIS   75 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcC------CCCeeeEEEEEccCCeEE
Confidence            5899999999999999999999999999999987543  23456677777777775      589999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      +||||+ +++|.+++....  .+++..+..++.|++.||.|||+ .|++|+||+|+||++                    
T Consensus        76 lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~--------------------  133 (264)
T cd06623          76 IVLEYMDGGSLADLLKKVG--KIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLI--------------------  133 (264)
T ss_pred             EEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEE--------------------
Confidence            999999 899999998764  69999999999999999999999 999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc---H
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN---L  296 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~---~  296 (399)
                          +.++.++|+|||.+.......   ....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+.   .
T Consensus       134 ----~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~  209 (264)
T cd06623         134 ----NSKGEVKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFF  209 (264)
T ss_pred             ----CCCCCEEEccCccceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHH
Confidence                456779999999876543322   245688999999999988999999999999999999999999977642   2


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh-hhhHHHHHHHHcc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR-ARSTLTDLLHGLL  375 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~li~~~L  375 (399)
                      +....+..   ...                    .                          ..... ++..+.++|.+||
T Consensus       210 ~~~~~~~~---~~~--------------------~--------------------------~~~~~~~~~~l~~li~~~l  240 (264)
T cd06623         210 ELMQAICD---GPP--------------------P--------------------------SLPAEEFSPEFRDFISACL  240 (264)
T ss_pred             HHHHHHhc---CCC--------------------C--------------------------CCCcccCCHHHHHHHHHHc
Confidence            22211110   000                    0                          00112 5778899999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCCCC
Q 015867          376 RYDPSERLTARQALNHPFFRNLNE  399 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~~e  399 (399)
                      ..+|.+|||+.++++||||++.++
T Consensus       241 ~~~p~~R~~~~~ll~~~~~~~~~~  264 (264)
T cd06623         241 QKDPKKRPSAAELLQHPFIKKADN  264 (264)
T ss_pred             cCChhhCCCHHHHHhCHHHHhccC
Confidence            999999999999999999998764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=100.00  E-value=1.3e-41  Score=311.45  Aligned_cols=245  Identities=21%  Similarity=0.266  Sum_probs=196.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEc---cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDR---QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ++|++.+.||+|+||.||+|.+.   ..+..||+|.++...  .....+..|+.++..+      .|+||+++++++...
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~   78 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQF------DHSNIVRLEGVITRG   78 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcC------CCCCcCeEEEEEecC
Confidence            46999999999999999999764   456789999987532  2234566677777665      469999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++..... .+++..+..++.||+.||+|||++|++||||||+|||++                
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~-~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~----------------  141 (266)
T cd05064          79 NTMMIVTEYMSNGALDSFLRKHEG-QLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN----------------  141 (266)
T ss_pred             CCcEEEEEeCCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc----------------
Confidence            9999999999 8899999987542 589999999999999999999999999999999999993                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHE  294 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~  294 (399)
                              .++.++++|||.+.......    ....++..|+|||.+.+..++.++|||||||++|++++ |..||...+
T Consensus       142 --------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~  213 (266)
T cd05064         142 --------SDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMS  213 (266)
T ss_pred             --------CCCcEEECCCcccccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCC
Confidence                    46679999999765432111    12235678999999999999999999999999999775 999998776


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....+......                                                 ..+..++..+.+++.+|
T Consensus       214 ~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~c  244 (266)
T cd05064         214 GQDVIKAVEDGFRL-------------------------------------------------PAPRNCPNLLHQLMLDC  244 (266)
T ss_pred             HHHHHHHHHCCCCC-------------------------------------------------CCCCCCCHHHHHHHHHH
Confidence            65554444221100                                                 11234567789999999


Q ss_pred             cccCCCCCCCHHHHhC
Q 015867          375 LRYDPSERLTARQALN  390 (399)
Q Consensus       375 L~~dP~~R~t~~ell~  390 (399)
                      |+.||.+|||+.+|++
T Consensus       245 ~~~~p~~RP~~~~i~~  260 (266)
T cd05064         245 WQKERGERPRFSQIHS  260 (266)
T ss_pred             cCCCchhCCCHHHHHH
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=100.00  E-value=2.1e-41  Score=309.51  Aligned_cols=246  Identities=19%  Similarity=0.304  Sum_probs=203.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      .+|.+.+.||.|+||.||+|.+..+++.||+|++.........+..|+++++.+.      |+|++++++++..++..++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~l   79 (263)
T cd05052           6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNLVQLLGVCTREPPFYI   79 (263)
T ss_pred             HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCC------CCChhheEEEEcCCCCcEE
Confidence            4599999999999999999999989999999998765444456777888888875      5899999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++.......+++..+..++.|++.||+|||+.|++||||||+||+++                     
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---------------------  138 (263)
T cd05052          80 ITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---------------------  138 (263)
T ss_pred             EEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---------------------
Confidence            99999 89999999876555689999999999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                         .++.++|+|||.+.......    ....++..|+|||.+.+..++.++|||||||++|+|++ |..||.+.+..+..
T Consensus       139 ---~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~  215 (263)
T cd05052         139 ---ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVY  215 (263)
T ss_pred             ---CCCcEEeCCCccccccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence               46679999999876543322    12234567999999999999999999999999999998 99999876655444


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.....                                                 ...+..++.++.++|.+||..||
T Consensus       216 ~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~li~~cl~~~p  246 (263)
T cd05052         216 ELLEKGYR-------------------------------------------------MERPEGCPPKVYELMRACWQWNP  246 (263)
T ss_pred             HHHHCCCC-------------------------------------------------CCCCCCCCHHHHHHHHHHccCCc
Confidence            33322100                                                 01123457788999999999999


Q ss_pred             CCCCCHHHHhC
Q 015867          380 SERLTARQALN  390 (399)
Q Consensus       380 ~~R~t~~ell~  390 (399)
                      ++|||+.++++
T Consensus       247 ~~Rp~~~~l~~  257 (263)
T cd05052         247 SDRPSFAEIHQ  257 (263)
T ss_pred             ccCCCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=100.00  E-value=9.5e-42  Score=316.89  Aligned_cols=254  Identities=26%  Similarity=0.438  Sum_probs=205.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      .++|.+.+.||+|+||.||++.+..+++.||+|.+.... .....+..|+.+++.+      .|+|++++++.+...+..
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~~~~~~~~~   91 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMREN------KHPNIVNYLDSYLVGDEL   91 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhc------CCCCeeehhheeeeCCcE
Confidence            368999999999999999999988889999999986432 2234456677766665      469999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+|+||+ +++|.+++.+..   +++..+..++.|++.||.|||++|++|+||||+||++.                   
T Consensus        92 ~lv~e~~~~~~L~~~~~~~~---l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~-------------------  149 (293)
T cd06647          92 WVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG-------------------  149 (293)
T ss_pred             EEEEecCCCCcHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc-------------------
Confidence            9999999 999999997653   88999999999999999999999999999999999993                   


Q ss_pred             cccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           .++.++|+|||++.....   ......|++.|+|||.+.+..++.++|+||||+++|++++|..||...+..+..
T Consensus       150 -----~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~  224 (293)
T cd06647         150 -----MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL  224 (293)
T ss_pred             -----CCCCEEEccCcceecccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe
Confidence                 456799999997654322   223456889999999998888999999999999999999999999876554332


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+...  ..+                     .+                        .....++..+.+||.+||..||
T Consensus       225 ~~~~~~--~~~---------------------~~------------------------~~~~~~~~~l~~li~~~l~~~p  257 (293)
T cd06647         225 YLIATN--GTP---------------------EL------------------------QNPEKLSAIFRDFLNRCLEMDV  257 (293)
T ss_pred             eehhcC--CCC---------------------CC------------------------CCccccCHHHHHHHHHHccCCh
Confidence            221110  000                     00                        0112346678899999999999


Q ss_pred             CCCCCHHHHhCCccccCCC
Q 015867          380 SERLTARQALNHPFFRNLN  398 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~~  398 (399)
                      .+||++.+++.||||+..+
T Consensus       258 ~~Rp~~~~il~h~~~~~~~  276 (293)
T cd06647         258 EKRGSAKELLQHPFLKIAK  276 (293)
T ss_pred             hhCcCHHHHhcCHHHhcCc
Confidence            9999999999999999754

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=1.1e-41  Score=314.87  Aligned_cols=255  Identities=27%  Similarity=0.410  Sum_probs=205.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      .+|++++.||+|+||+||++.+..+++.||+|++....  .....+..|+++++.+.      |+||+++++.+...+..
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~   78 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECR------SPYIVSFYGAFLNENNI   78 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcC------CCCcceEeeeEecCCEE
Confidence            46899999999999999999999999999999886432  23456777888887774      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ++||||+ +++|.+++...+  .+++..+..++.|++.||.|||+ .|++|+||||+||+++                  
T Consensus        79 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~------------------  138 (284)
T cd06620          79 CMCMEFMDCGSLDRIYKKGG--PIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN------------------  138 (284)
T ss_pred             EEEEecCCCCCHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC------------------
Confidence            9999999 899999988765  58999999999999999999997 6899999999999993                  


Q ss_pred             CcccCCCCCceEEeecCCcccC-CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH--
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH--  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~--  298 (399)
                            .++.++|+|||++... ........|+..|+|||++.+..++.++|+|||||++|++++|..||......+.  
T Consensus       139 ------~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~  212 (284)
T cd06620         139 ------SRGQIKLCDFGVSGELINSIADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQ  212 (284)
T ss_pred             ------CCCcEEEccCCcccchhhhccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhh
Confidence                  4667999999987543 2223456789999999999888999999999999999999999999986543211  


Q ss_pred             ------HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          299 ------LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       299 ------~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                            ...+.......                    .                         .......++.++.+||.
T Consensus       213 ~~~~~~~~~~~~~~~~~--------------------~-------------------------~~~~~~~~~~~~~~li~  247 (284)
T cd06620         213 DDPMGILDLLQQIVQEP--------------------P-------------------------PRLPSSDFPEDLRDFVD  247 (284)
T ss_pred             hhhhHHHHHHHHHhhcc--------------------C-------------------------CCCCchhcCHHHHHHHH
Confidence                  00000000000                    0                         00001125677899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||+.||.+|||+.|+++||||.+-
T Consensus       248 ~~l~~dp~~Rpt~~e~~~~~~~~~~  272 (284)
T cd06620         248 ACLLKDPTERPTPQQLCAMPPFIQA  272 (284)
T ss_pred             HHhcCCcccCcCHHHHhcCcccccc
Confidence            9999999999999999999999653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-41  Score=312.98  Aligned_cols=278  Identities=31%  Similarity=0.540  Sum_probs=216.3

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      |++.+.||.|++|+||+|....+++.|+||.+.....  .......|+..+..+.     +|+|++++++.+...+..++
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~-----~h~~i~~~~~~~~~~~~~~l   75 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLN-----EHPNIVKLKEVFRENDELYF   75 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhcc-----CCCCchhHHHHhhcCCcEEE
Confidence            6788999999999999999988999999999864322  1122334555555553     36999999999999999999


Q ss_pred             EEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          146 VFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       146 v~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      ||||++++|.+++.......+++..+..++.|++.+|.|||++|++|+||||+||++                       
T Consensus        76 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i-----------------------  132 (283)
T cd07830          76 VFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLV-----------------------  132 (283)
T ss_pred             EEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEE-----------------------
Confidence            999998899999987654468999999999999999999999999999999999999                       


Q ss_pred             CCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                       +.++.++|+|||.+.....  ......|+..|+|||++.+ ..++.++|+||||+++|+|++|.+||...+..+....+
T Consensus       133 -~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~  211 (283)
T cd07830         133 -SGPEVVKIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKI  211 (283)
T ss_pred             -cCCCCEEEeecccceeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHH
Confidence             4467899999998865433  2234568999999998854 45889999999999999999999999999888888888


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      ....+.++...+........     .....++.....               ......+..+.++.+||.+||+.||.+|
T Consensus       212 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~li~~cl~~~p~~R  271 (283)
T cd07830         212 CSVLGTPTKQDWPEGYKLAS-----KLGFRFPQFAPT---------------SLHQLIPNASPEAIDLIKDMLRWDPKKR  271 (283)
T ss_pred             HHhcCCCChhhhhhHhhhhc-----cccccccccccc---------------cHHHHcccCCHHHHHHHHHhcccCcccC
Confidence            88877776554433211110     000111110000               0011112336778999999999999999


Q ss_pred             CCHHHHhCCccc
Q 015867          383 LTARQALNHPFF  394 (399)
Q Consensus       383 ~t~~ell~hp~f  394 (399)
                      ||+.|++.||||
T Consensus       272 pt~~ei~~~~~~  283 (283)
T cd07830         272 PTASQALQHPYF  283 (283)
T ss_pred             CCHHHHhhCCCC
Confidence            999999999998

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-41  Score=312.40  Aligned_cols=276  Identities=34%  Similarity=0.605  Sum_probs=216.9

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      |++.+.||+|++|.||+|.+..+++.+++|.+.....   ....+..|+++++.+.      |++++++++++.+.+..+
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~   74 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELN------HPNIIKLLDVFRHKGDLY   74 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhc------CCCcchHHHhhccCCCEE
Confidence            6778999999999999999988999999999864322   2345667888888775      589999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          145 IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       145 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      +||||++++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+||+++                     
T Consensus        75 ~v~e~~~~~l~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---------------------  132 (283)
T cd05118          75 LVFEFMDTDLYKLIKDRQ-RGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---------------------  132 (283)
T ss_pred             EEEeccCCCHHHHHHhhc-ccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---------------------
Confidence            999999779999887753 3689999999999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                         .++.++|+|||.+.......   ....++..|+|||.+.+. .++.++|+||||+++|+|++|+.||...+..+...
T Consensus       133 ---~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~  209 (283)
T cd05118         133 ---TEGVLKLADFGLARSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLF  209 (283)
T ss_pred             ---CCCcEEEeeeeeeEecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence               46779999999876543322   234678899999999877 78999999999999999999999999888888777


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+....+.+....+..........     ....+...               ........+.++.++.+||.+||+.||.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~---------------~~~~~~~~~~~~~~~~~~i~~~l~~~P~  269 (283)
T cd05118         210 KIFRTLGTPDPEVWPKFTSLARNY-----KFSFPKKA---------------GMPLPKLFPNASPQALDLLSQMLHYDPH  269 (283)
T ss_pred             HHHHHcCCCchHhcccchhhhhhh-----hhhhcccc---------------ccCHHHhhhhhCHHHHHHHHHHhccCcc
Confidence            777666655444333322110000     00000000               0000112245788999999999999999


Q ss_pred             CCCCHHHHhCCccc
Q 015867          381 ERLTARQALNHPFF  394 (399)
Q Consensus       381 ~R~t~~ell~hp~f  394 (399)
                      +||++.++++||||
T Consensus       270 ~Rp~~~~ll~~~~~  283 (283)
T cd05118         270 KRITAEQALAHPYF  283 (283)
T ss_pred             cCcCHHHHhhCCCC
Confidence            99999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=100.00  E-value=4.4e-41  Score=311.44  Aligned_cols=259  Identities=25%  Similarity=0.384  Sum_probs=201.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--CC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--RN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--~~  141 (399)
                      ++|+..++||.|++|.||+|.+..+++.||+|.+....  .....+..|+++++.+.      |+||+++++++..  .+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~   74 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCK------SPYIVKYYGAFLDESSS   74 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCC------CCCeeeeeeEEEccCCC
Confidence            36999999999999999999999999999999987532  23455677777777764      5999999998765  34


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+|+||||+ +++|.+++...  ....+++..+..++.||+.||.|||+.|++|+||+|+||+++               
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---------------  139 (287)
T cd06621          75 SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---------------  139 (287)
T ss_pred             eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---------------
Confidence            789999999 89999887542  223589999999999999999999999999999999999994               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc--
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN--  295 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--  295 (399)
                               .++.++|+|||++..... ......++..|+|||.+.+..++.++|+||||+++|+|++|..||.....  
T Consensus       140 ---------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~  210 (287)
T cd06621         140 ---------RKGQVKLCDFGVSGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPP  210 (287)
T ss_pred             ---------cCCeEEEeeccccccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCC
Confidence                     456799999998765332 22345678899999999998999999999999999999999999976532  


Q ss_pred             ---HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          296 ---LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       296 ---~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                         .+....+..   .....+                    +..                    .......+..+.+||.
T Consensus       211 ~~~~~~~~~~~~---~~~~~~--------------------~~~--------------------~~~~~~~~~~~~~li~  247 (287)
T cd06621         211 LGPIELLSYIVN---MPNPEL--------------------KDE--------------------PGNGIKWSEEFKDFIK  247 (287)
T ss_pred             CChHHHHHHHhc---CCchhh--------------------ccC--------------------CCCCCchHHHHHHHHH
Confidence               111111110   000000                    000                    0000123567899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||..||.+|||+.|+++||||++.
T Consensus       248 ~~l~~~p~~Rpt~~eil~~~~~~~~  272 (287)
T cd06621         248 QCLEKDPTRRPTPWDMLEHPWIKAQ  272 (287)
T ss_pred             HHcCCCcccCCCHHHHHhCcccccc
Confidence            9999999999999999999999864

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.7e-41  Score=312.48  Aligned_cols=253  Identities=25%  Similarity=0.421  Sum_probs=205.0

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .|++.+.||.|+||.||+|.+..+++.||+|.++..  ......+..|+.+++.+.+   ..|+|++++++++......|
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~---~~~~~vi~~~~~~~~~~~~~   78 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQ---SQPPNITKYYGSYLKGPRLW   78 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhcc---CCCCCeeeEeeeeeeCCEEE
Confidence            488899999999999999999999999999998643  2233456778888888864   35799999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++...   .+++..+..++.|++.||.|||+.||+|+||+|+||+++                    
T Consensus        79 lv~e~~~~~~L~~~~~~~---~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~--------------------  135 (277)
T cd06917          79 IIMEYAEGGSVRTLMKAG---PIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT--------------------  135 (277)
T ss_pred             EEEecCCCCcHHHHHHcc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc--------------------
Confidence            999999 99999998764   589999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                          .++.++|+|||.+......   .....|+..|+|||.+.+ ..++.++|+||||+++|+|++|..||...+.....
T Consensus       136 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~  211 (277)
T cd06917         136 ----NTGNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAM  211 (277)
T ss_pred             ----CCCCEEEccCCceeecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhh
Confidence                4667999999987654322   234578999999999865 45789999999999999999999999765443222


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+...   .+                    ..+                         ....++.++.+||.+||+.||
T Consensus       212 ~~~~~~---~~--------------------~~~-------------------------~~~~~~~~~~~~i~~~l~~~p  243 (277)
T cd06917         212 MLIPKS---KP--------------------PRL-------------------------EDNGYSKLLREFVAACLDEEP  243 (277)
T ss_pred             hccccC---CC--------------------CCC-------------------------CcccCCHHHHHHHHHHcCCCc
Confidence            111100   00                    000                         001256778999999999999


Q ss_pred             CCCCCHHHHhCCccccCC
Q 015867          380 SERLTARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~  397 (399)
                      .+|||+.+++.||||++.
T Consensus       244 ~~R~~~~~il~~~~~~~~  261 (277)
T cd06917         244 KERLSAEELLKSKWIKAH  261 (277)
T ss_pred             ccCcCHHHHhhChHhhcc
Confidence            999999999999999875

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=100.00  E-value=3.4e-41  Score=306.70  Aligned_cols=248  Identities=30%  Similarity=0.471  Sum_probs=203.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +|+..+.||+|+||.||+|.+..+++.|++|.+....      .....+..|+++++.+.      |+|++++++++...
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~   74 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQ------HPNIVQYLGTEREE   74 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcC------CCCchheeeeEecC
Confidence            4788899999999999999998899999999986532      12345667777777764      59999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      ...++||||+ +++|.+++.+..  .+++..+..++.||+.||.|||+.||+|+||+|+||+++                
T Consensus        75 ~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~----------------  136 (258)
T cd06632          75 DNLYIFLELVPGGSLAKLLKKYG--SFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD----------------  136 (258)
T ss_pred             CeEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC----------------
Confidence            9999999999 889999998765  589999999999999999999999999999999999993                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                              .++.++|+|||.+......  .....|+..|+|||.+.... ++.++|+||||+++|+|++|..||......
T Consensus       137 --------~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~  208 (258)
T cd06632         137 --------TNGVVKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGV  208 (258)
T ss_pred             --------CCCCEEEccCccceeccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHH
Confidence                    4667999999987653322  34567899999999998776 899999999999999999999999766543


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....+.... ..+                                               ..++.++..+.+||.+||.
T Consensus       209 ~~~~~~~~~~-~~~-----------------------------------------------~~~~~~~~~~~~li~~~l~  240 (258)
T cd06632         209 AAVFKIGRSK-ELP-----------------------------------------------PIPDHLSDEAKDFILKCLQ  240 (258)
T ss_pred             HHHHHHHhcc-cCC-----------------------------------------------CcCCCcCHHHHHHHHHHhh
Confidence            3333322100 000                                               1123456788999999999


Q ss_pred             cCCCCCCCHHHHhCCccc
Q 015867          377 YDPSERLTARQALNHPFF  394 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f  394 (399)
                      .||.+|||+.+++.|||+
T Consensus       241 ~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         241 RDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             cCcccCcCHHHHhcCCCC
Confidence            999999999999999997

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=100.00  E-value=2.4e-41  Score=311.52  Aligned_cols=248  Identities=28%  Similarity=0.480  Sum_probs=206.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|.+.+.||+|+||.||+|.+..+++.||+|++....    .....+..|.++++.+.     .|+||+++++++...+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~-----~~~~i~~~~~~~~~~~   75 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLN-----GHPGIIKLYYTFQDEE   75 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcc-----cCCCchhHHHHhcCCc
Confidence            36999999999999999999999999999999986522    22345566777777665     3699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++|||++ +++|.+++.+.+  .+++..+..++.|++.||.+||+.|++|+||||+||++.                 
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~-----------------  136 (280)
T cd05581          76 NLYFVLEYAPNGELLQYIRKYG--SLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD-----------------  136 (280)
T ss_pred             eEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC-----------------
Confidence            999999999 999999998875  599999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC-----------------------CcccccCCCccchhhhhCCCCCCcchhHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN-----------------------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVG  277 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~-----------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  277 (399)
                             .++.++|+|||++......                       .....|+..|+|||++.+..++.++|+||||
T Consensus       137 -------~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG  209 (280)
T cd05581         137 -------KDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALG  209 (280)
T ss_pred             -------CCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHH
Confidence                   4567899999976643221                       1234678999999999988899999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhh
Q 015867          278 CILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS  357 (399)
Q Consensus       278 ~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      ++++++++|..||...+.......+......                                                 
T Consensus       210 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------------------------  240 (280)
T cd05581         210 CIIYQMLTGKPPFRGSNEYLTFQKILKLEYS-------------------------------------------------  240 (280)
T ss_pred             HHHHHHHhCCCCCCCccHHHHHHHHHhcCCC-------------------------------------------------
Confidence            9999999999999877654444443322111                                                 


Q ss_pred             ccchhhhhHHHHHHHHccccCCCCCCCH----HHHhCCccc
Q 015867          358 LHVDRARSTLTDLLHGLLRYDPSERLTA----RQALNHPFF  394 (399)
Q Consensus       358 ~~~~~~~~~~~~li~~~L~~dP~~R~t~----~ell~hp~f  394 (399)
                       .+..++..+.+||.+||..||.+|||+    +++++||||
T Consensus       241 -~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         241 -FPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             -CCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence             112446778999999999999999999    999999998

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=100.00  E-value=5.4e-41  Score=309.60  Aligned_cols=275  Identities=33%  Similarity=0.572  Sum_probs=221.5

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      |++.+.||+|+||.||+|.+..+++.||+|++....   ........|+.+++.+.      |++++++++++.+.+..+
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~~   74 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELK------HPNIVKLLDVIHTERKLY   74 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcC------CCCHHHHHhhhhcCCceE
Confidence            677889999999999999999999999999997642   23345566888887775      599999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          145 IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       145 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      +||||++++|.+++.+.. ..+++..+..++.|++.||.|||+.||+|+||+|+||++                      
T Consensus        75 ~v~e~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~----------------------  131 (282)
T cd07829          75 LVFEYCDMDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILI----------------------  131 (282)
T ss_pred             EEecCcCcCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEE----------------------
Confidence            999999779999998763 259999999999999999999999999999999999999                      


Q ss_pred             cCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                        +.++.++|+|||.+......   .....++..|+|||.+.+. .++.++|+||||+++|++++|.+||...+..+.+.
T Consensus       132 --~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~  209 (282)
T cd07829         132 --NRDGVLKLADFGLARAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLF  209 (282)
T ss_pred             --cCCCCEEEecCCcccccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHH
Confidence              34677999999987654332   2234567889999999876 88999999999999999999999999988888888


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+....+......+........  + ......|+..                  ......+..+..+.++|.+||..||.
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~l~~~P~  268 (282)
T cd07829         210 KIFQILGTPTEESWPGVTKLPD--Y-KPTFPKFPPK------------------DLEKVLPRLDPEGIDLLSKMLQYNPA  268 (282)
T ss_pred             HHHHHhCCCcHHHHHhhccccc--c-cccccccCcc------------------chHHhcccccHHHHHHHHHhhccCcc
Confidence            8888888777776665533220  0 0000111110                  00111234477899999999999999


Q ss_pred             CCCCHHHHhCCccc
Q 015867          381 ERLTARQALNHPFF  394 (399)
Q Consensus       381 ~R~t~~ell~hp~f  394 (399)
                      +||++.++++||||
T Consensus       269 ~Rp~~~~~l~~p~~  282 (282)
T cd07829         269 KRISAKEALKHPYF  282 (282)
T ss_pred             cCCCHHHHhhCcCC
Confidence            99999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=100.00  E-value=1.5e-41  Score=321.94  Aligned_cols=285  Identities=33%  Similarity=0.516  Sum_probs=220.0

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+++.+|+|.+...   ......+..|+.+++.+.     +|+||+++++++.
T Consensus         3 ~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~ni~~~~~~~~   77 (337)
T cd07852           3 KHILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELG-----DHPNIVKLLNVIK   77 (337)
T ss_pred             chhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhc-----CCCCccceeeeec
Confidence            34567899999999999999999999889999999988532   222344566888888772     3599999999876


Q ss_pred             c--CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          139 Y--RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       139 ~--~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      .  ....|+||||++++|.+++...   .+++..+..++.||+.||.|||++||+|+||||+||++              
T Consensus        78 ~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill--------------  140 (337)
T cd07852          78 AENDKDIYLVFEYMETDLHAVIRAN---ILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILL--------------  140 (337)
T ss_pred             cCCCceEEEEecccccCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE--------------
Confidence            5  3478999999988999998765   48899999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCC--------CCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--------NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGE  287 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~  287 (399)
                                +.++.++|+|||.+.....        ......||..|+|||++.+ ..++.++|+||||+++|+|++|+
T Consensus       141 ----------~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~  210 (337)
T cd07852         141 ----------NSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGK  210 (337)
T ss_pred             ----------cCCCcEEEeeccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCC
Confidence                      4567899999998764322        2234568999999998765 46889999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHH
Q 015867          288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL  367 (399)
Q Consensus       288 ~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (399)
                      +||.+....+...++....+..+...+..........+.                 .... ....... ....+.++.++
T Consensus       211 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~-~~~~~~~-~~~~~~~~~~l  271 (337)
T cd07852         211 PLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATML-----------------DSLP-SRPRKPL-DELLPKASDDA  271 (337)
T ss_pred             CCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhh-----------------hhcc-cccccch-hhhccCCCHHH
Confidence            999988888888888777776665443333211111000                 0000 0000000 11223468889


Q ss_pred             HHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          368 TDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .+||.+||+.||.+|||+.++++||||++.
T Consensus       272 ~~li~~~l~~~P~~Rps~~~il~~~~~~~~  301 (337)
T cd07852         272 LDLLKKLLVFNPNKRLTAEEALEHPYVAQF  301 (337)
T ss_pred             HHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence            999999999999999999999999999875

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=100.00  E-value=1.2e-41  Score=326.49  Aligned_cols=248  Identities=22%  Similarity=0.331  Sum_probs=195.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEcc-----CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQ-----TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||+|+||.||+|.+..     +++.||+|+++...  .....+..|+++++.+.     .|+||+++++++.
T Consensus        38 ~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~-----~h~nIv~~~~~~~  112 (374)
T cd05106          38 DNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLG-----QHKNIVNLLGACT  112 (374)
T ss_pred             HHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhc-----cCCceeeEeeEec
Confidence            469999999999999999998643     34579999986532  23345667888888773     3699999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC-------------------------------------------------------
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNK-------------------------------------------------------  162 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~-------------------------------------------------------  162 (399)
                      ..+..++||||+ +++|.+++....                                                       
T Consensus       113 ~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  192 (374)
T cd05106         113 HGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSS  192 (374)
T ss_pred             CCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccc
Confidence            999999999999 999999986432                                                       


Q ss_pred             -------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCC
Q 015867          163 -------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS  229 (399)
Q Consensus       163 -------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (399)
                                   ...+++..+..++.||+.||.|||++||+||||||+|||++                        .+
T Consensus       193 ~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~------------------------~~  248 (374)
T cd05106         193 QSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT------------------------DG  248 (374)
T ss_pred             ccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe------------------------CC
Confidence                         12477888999999999999999999999999999999994                        45


Q ss_pred             CceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 015867          230 SAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME  303 (399)
Q Consensus       230 ~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~  303 (399)
                      ..++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ |..||...........+.
T Consensus       249 ~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~  328 (374)
T cd05106         249 RVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMV  328 (374)
T ss_pred             CeEEEeeceeeeeccCCcceeeccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHH
Confidence            679999999986532221     12234567999999999999999999999999999997 999997654433222222


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      .....                                                ...+...+.++.++|.+||+.||.+||
T Consensus       329 ~~~~~------------------------------------------------~~~~~~~~~~l~~li~~cl~~dp~~RP  360 (374)
T cd05106         329 KRGYQ------------------------------------------------MSRPDFAPPEIYSIMKMCWNLEPTERP  360 (374)
T ss_pred             HcccC------------------------------------------------ccCCCCCCHHHHHHHHHHcCCChhhCc
Confidence            11000                                                001123467889999999999999999


Q ss_pred             CHHHHhC
Q 015867          384 TARQALN  390 (399)
Q Consensus       384 t~~ell~  390 (399)
                      |+.++++
T Consensus       361 s~~~l~~  367 (374)
T cd05106         361 TFSQISQ  367 (374)
T ss_pred             CHHHHHH
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=100.00  E-value=3.9e-41  Score=314.90  Aligned_cols=253  Identities=26%  Similarity=0.379  Sum_probs=205.0

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ...+|++.+.||+|+||.||+|.+..+++.||+|.+....    .....+..|+++++.+.      |+|++++++++.+
T Consensus        13 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~niv~~~~~~~~   86 (307)
T cd06607          13 PEKLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLR------HPNTIEYKGCYLR   86 (307)
T ss_pred             cchhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCC------CCCEEEEEEEEEe
Confidence            3457999999999999999999998899999999986422    22234566777777764      5999999999999


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          140 RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       140 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      .+..++||||+.++|.+++..... .+++..+..++.|++.||.|||+.||+|+||+|+||+++                
T Consensus        87 ~~~~~lv~e~~~g~l~~~~~~~~~-~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~----------------  149 (307)
T cd06607          87 EHTAWLVMEYCLGSASDILEVHKK-PLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT----------------  149 (307)
T ss_pred             CCeEEEEHHhhCCCHHHHHHHccc-CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC----------------
Confidence            999999999998888888765433 589999999999999999999999999999999999993                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                              .++.++|+|||++...... ....|+..|+|||++.   ...++.++||||||+++|+|++|..||...+..
T Consensus       150 --------~~~~~kL~dfg~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~  220 (307)
T cd06607         150 --------EPGTVKLADFGSASLVSPA-NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  220 (307)
T ss_pred             --------CCCCEEEeecCcceecCCC-CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH
Confidence                    4667999999988654332 3457889999999874   356889999999999999999999999876655


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      .....+....  .+                                              ......++..+.+||.+||.
T Consensus       221 ~~~~~~~~~~--~~----------------------------------------------~~~~~~~~~~~~~li~~~l~  252 (307)
T cd06607         221 SALYHIAQND--SP----------------------------------------------TLSSNDWSDYFRNFVDSCLQ  252 (307)
T ss_pred             HHHHHHhcCC--CC----------------------------------------------CCCchhhCHHHHHHHHHHhc
Confidence            4433332110  00                                              00012346678999999999


Q ss_pred             cCCCCCCCHHHHhCCccccC
Q 015867          377 YDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~  396 (399)
                      .||.+||++.+++.||||..
T Consensus       253 ~~p~~Rp~~~~il~~~~~~~  272 (307)
T cd06607         253 KIPQDRPSSEELLKHRFVLR  272 (307)
T ss_pred             CChhhCcCHHHHhcChhhcc
Confidence            99999999999999999975

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=100.00  E-value=9.8e-42  Score=315.86  Aligned_cols=258  Identities=24%  Similarity=0.385  Sum_probs=200.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +|+..+.||+|+||.||++.+..+++.||+|.+....  .....+..|+.++..+.     +|+||+++++++..++..+
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~-----~~~~iv~~~~~~~~~~~~~   79 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSS-----DCPYIVKFYGALFREGDCW   79 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhc-----CCCCEeeeeeEEecCCcEE
Confidence            4677889999999999999999999999999986432  23345666777776664     3689999999999899999


Q ss_pred             EEEccCCCCHHHHHH---hcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          145 IVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       145 lv~e~~~~~L~~~l~---~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ++|||+++++.++..   ......+++..+..++.|++.||+|||+. ||+||||||+||+++                 
T Consensus        80 ~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~-----------------  142 (288)
T cd06616          80 ICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD-----------------  142 (288)
T ss_pred             EEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc-----------------
Confidence            999999777665443   22334699999999999999999999975 999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                             .++.++|+|||++.....  ......|+..|+|||++.+.   .++.++|+|||||++|+|++|..||.... 
T Consensus       143 -------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-  214 (288)
T cd06616         143 -------RNGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-  214 (288)
T ss_pred             -------cCCcEEEeecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-
Confidence                   456799999998765322  22344689999999999876   68999999999999999999999997644 


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                       .....+.+.....+..+                                          .......++.++.+||.+||
T Consensus       215 -~~~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~l~~li~~~l  251 (288)
T cd06616         215 -SVFDQLTQVVKGDPPIL------------------------------------------SNSEEREFSPSFVNFINLCL  251 (288)
T ss_pred             -hHHHHHhhhcCCCCCcC------------------------------------------CCcCCCccCHHHHHHHHHHc
Confidence             12222222111110000                                          00011246778899999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCC
Q 015867          376 RYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +.||.+|||++++++||||++.
T Consensus       252 ~~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         252 IKDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             cCChhhCcCHHHHhcChhhhch
Confidence            9999999999999999999874

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=100.00  E-value=5.2e-41  Score=306.45  Aligned_cols=249  Identities=24%  Similarity=0.410  Sum_probs=203.4

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--CC
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--RN  141 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--~~  141 (399)
                      +|++.+.||.|+||.||++.+..+++.||+|.+...   ......+..|+++++.+.      |+|++++++.+..  ..
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~   74 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELK------HPNIVRYYDRIIDRSNQ   74 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcC------CCccceeeeeeecCCCC
Confidence            589999999999999999999999999999998642   223345666777777775      5899999987753  46


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHH-----HCCccccCCCCCcEEEeecccccCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMH-----DLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH-----~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      ..+++|||+ +++|.+++...  ....+++..+..++.||+.||.|||     +.+++|+||||+||+++          
T Consensus        75 ~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~----------  144 (265)
T cd08217          75 TLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD----------  144 (265)
T ss_pred             EEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe----------
Confidence            789999999 89999999763  2236899999999999999999999     89999999999999994          


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                                    .++.++|+|||++......   .....|++.|+|||++.+..++.++|+||||+++|+|++|..||
T Consensus       145 --------------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  210 (265)
T cd08217         145 --------------ANNNVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPF  210 (265)
T ss_pred             --------------cCCCEEEecccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcc
Confidence                          4678999999987764332   23457899999999999888999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      ...+..+....+.....                                                 ...+..++..+.+|
T Consensus       211 ~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~l  241 (265)
T cd08217         211 TARNQLQLASKIKEGKF-------------------------------------------------RRIPYRYSSELNEV  241 (265)
T ss_pred             cCcCHHHHHHHHhcCCC-------------------------------------------------CCCccccCHHHHHH
Confidence            87664443333322110                                                 01113456788999


Q ss_pred             HHHccccCCCCCCCHHHHhCCccc
Q 015867          371 LHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      +.+||..||.+|||+.++++|||+
T Consensus       242 ~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         242 IKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             HHHHccCCcccCCCHHHHhhCCCC
Confidence            999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.4e-43  Score=326.86  Aligned_cols=253  Identities=26%  Similarity=0.454  Sum_probs=219.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .+++++..||-||||.|-++........+|+|++++.    .........|..|+....      .+.||++|-.|.++.
T Consensus       420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~------s~fIvrLYrTfrd~k  493 (732)
T KOG0614|consen  420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECR------SDFIVRLYRTFRDSK  493 (732)
T ss_pred             hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcC------chHHHHHHHHhccch
Confidence            4578888999999999999876655556999998753    244555677888888775      389999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      +.|++||-| ||.|+..++..+  .|+...++.|+..+++|++|||++|||+|||||+|+++                  
T Consensus       494 yvYmLmEaClGGElWTiLrdRg--~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllL------------------  553 (732)
T KOG0614|consen  494 YVYMLMEACLGGELWTILRDRG--SFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLL------------------  553 (732)
T ss_pred             hhhhhHHhhcCchhhhhhhhcC--CcccchhhhhHHHHHHHHHHHHhcCceeccCChhheee------------------
Confidence            999999999 999999999888  59999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                            +.++=+||.|||+|+....  .+-++||||.|.|||++.+.+.+.++|.||||+++|||++|.+||++.+++.+
T Consensus       554 ------d~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmkt  627 (732)
T KOG0614|consen  554 ------DNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKT  627 (732)
T ss_pred             ------ccCCceEEeehhhHHHhccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHH
Confidence                  4566699999999988544  45678999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +..|.++...                      +.|                          +..++..+.+||+++.+.+
T Consensus       628 Yn~ILkGid~----------------------i~~--------------------------Pr~I~k~a~~Lik~LCr~~  659 (732)
T KOG0614|consen  628 YNLILKGIDK----------------------IEF--------------------------PRRITKTATDLIKKLCRDN  659 (732)
T ss_pred             HHHHHhhhhh----------------------hhc--------------------------ccccchhHHHHHHHHHhcC
Confidence            9988776321                      122                          2456777889999999999


Q ss_pred             CCCCCC-----HHHHhCCccccCCC
Q 015867          379 PSERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t-----~~ell~hp~f~~~~  398 (399)
                      |.+|+.     +.+|..|.||.+.+
T Consensus       660 P~ERLG~~~~gI~DIkkH~Wf~gfd  684 (732)
T KOG0614|consen  660 PTERLGYQKGGINDIKKHRWFEGFD  684 (732)
T ss_pred             cHhhhccccCChHHHHhhhhhhcCC
Confidence            999996     88999999998864

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-43  Score=299.67  Aligned_cols=253  Identities=26%  Similarity=0.407  Sum_probs=205.0

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhh--hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +.+++..||.|+-|+||+++.+.+|...|||.++.+...  .++....+.++..-     ...|.||+.+++|..+...+
T Consensus        93 dl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s-----~dcpyIV~c~GyFi~n~dV~  167 (391)
T KOG0983|consen   93 DLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKS-----HDCPYIVQCFGYFITNTDVF  167 (391)
T ss_pred             HhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhc-----cCCCeeeeeeeEEeeCchHH
Confidence            346778899999999999999999999999999765332  22233333333221     24689999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +.||.|+.-+..++.+-+. ++++..+-.+...++.||.||-. +||+|||+||+|||+                     
T Consensus       168 IcMelMs~C~ekLlkrik~-piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILl---------------------  225 (391)
T KOG0983|consen  168 ICMELMSTCAEKLLKRIKG-PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL---------------------  225 (391)
T ss_pred             HHHHHHHHHHHHHHHHhcC-CchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEE---------------------
Confidence            9999998778787776554 69999999999999999999986 489999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCCCCC-CcHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH-ENLE  297 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~  297 (399)
                         +..+.+||||||++.+.-  ...+...|.+.|||||.+.-.   .|+..+||||||++++||.||+.||.+. .+.+
T Consensus       226 ---De~GniKlCDFGIsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe  302 (391)
T KOG0983|consen  226 ---DERGNIKLCDFGISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFE  302 (391)
T ss_pred             ---ccCCCEEeecccccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHH
Confidence               567889999999987633  334556799999999999743   6999999999999999999999999984 4667


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ++.+|.....+.   +                                            .....+|+++++|+..||+.
T Consensus       303 ~ltkvln~ePP~---L--------------------------------------------~~~~gFSp~F~~fv~~CL~k  335 (391)
T KOG0983|consen  303 VLTKVLNEEPPL---L--------------------------------------------PGHMGFSPDFQSFVKDCLTK  335 (391)
T ss_pred             HHHHHHhcCCCC---C--------------------------------------------CcccCcCHHHHHHHHHHhhc
Confidence            777765532211   0                                            11124789999999999999


Q ss_pred             CCCCCCCHHHHhCCccccC
Q 015867          378 DPSERLTARQALNHPFFRN  396 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~  396 (399)
                      |+.+||...+||+|||+..
T Consensus       336 d~r~RP~Y~~Ll~h~Fi~~  354 (391)
T KOG0983|consen  336 DHRKRPKYNKLLEHPFIKR  354 (391)
T ss_pred             CcccCcchHHHhcCcceee
Confidence            9999999999999999875

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=100.00  E-value=6.1e-41  Score=310.24  Aligned_cols=251  Identities=27%  Similarity=0.458  Sum_probs=205.0

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      .|...+.||+|++|.||++.+..+++.+++|.+.... .....+..|+.+++.+.      |+|++++++++...+..++
T Consensus        20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~------h~~vv~~~~~~~~~~~~~~   93 (285)
T cd06648          20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HPNIVEMYSSYLVGDELWV   93 (285)
T ss_pred             hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcC------CCChheEEEEEEcCCeEEE
Confidence            4666689999999999999998899999999886432 22344566777777664      5999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      |+||+ +++|.+++...   .++...+..++.|++.||+|||++||+||||||+||+++                     
T Consensus        94 v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---------------------  149 (285)
T cd06648          94 VMEFLEGGALTDIVTHT---RMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---------------------  149 (285)
T ss_pred             EEeccCCCCHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---------------------
Confidence            99999 99999999873   489999999999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM  301 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~  301 (399)
                         .++.++|+|||.+.....   ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.......
T Consensus       150 ---~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~  226 (285)
T cd06648         150 ---SDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR  226 (285)
T ss_pred             ---CCCcEEEcccccchhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHH
Confidence               466799999997654322   22345689999999999988899999999999999999999999987665555444


Q ss_pred             HHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCC
Q 015867          302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE  381 (399)
Q Consensus       302 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  381 (399)
                      +.....+.                                               ......++..+.+||.+||..||.+
T Consensus       227 ~~~~~~~~-----------------------------------------------~~~~~~~~~~l~~li~~~l~~~p~~  259 (285)
T cd06648         227 IRDNLPPK-----------------------------------------------LKNLHKVSPRLRSFLDRMLVRDPAQ  259 (285)
T ss_pred             HHhcCCCC-----------------------------------------------CcccccCCHHHHHHHHHHcccChhh
Confidence            33221000                                               0011235677899999999999999


Q ss_pred             CCCHHHHhCCccccCC
Q 015867          382 RLTARQALNHPFFRNL  397 (399)
Q Consensus       382 R~t~~ell~hp~f~~~  397 (399)
                      |||+.++++||||++.
T Consensus       260 Rpt~~~il~~~~~~~~  275 (285)
T cd06648         260 RATAAELLNHPFLAKA  275 (285)
T ss_pred             CcCHHHHccCcccccC
Confidence            9999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=100.00  E-value=2.6e-41  Score=308.52  Aligned_cols=245  Identities=33%  Similarity=0.558  Sum_probs=201.6

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      ||.|+||.||++.+..+++.|++|++.....    ....+..|.++++.+.      |+|++++++.+......|+||||
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~~~~lv~e~   74 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQ------SPYVVKLYYSFQGKKNLYLVMEY   74 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCC------CcchhHHHHheecCcEEEEEEec
Confidence            6899999999999998899999999865322    2344555666666664      59999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      + +++|.+++.+.+  .+++..+..++.||+.||+|||+.|++|+||+|+||++                        +.
T Consensus        75 ~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~------------------------~~  128 (265)
T cd05579          75 LPGGDLASLLENVG--SLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILI------------------------DS  128 (265)
T ss_pred             CCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEE------------------------cC
Confidence            9 889999998765  59999999999999999999999999999999999999                        44


Q ss_pred             CCceEEeecCCcccCCCC-----------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          229 SSAIKLIDFGSTAFDNQN-----------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                      ++.++|+|||++......           .....++..|+|||.+.+..++.++|+||||+++|++++|..||......+
T Consensus       129 ~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~  208 (265)
T cd05579         129 NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE  208 (265)
T ss_pred             CCCEEEEecccchhcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            667999999987653221           234568889999999998889999999999999999999999998777655


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+....                        ..||..                        ...+..+.+||.+||+.
T Consensus       209 ~~~~~~~~~------------------------~~~~~~------------------------~~~~~~~~~~i~~~l~~  240 (265)
T cd05579         209 IFQNILNGK------------------------IEWPED------------------------VEVSDEAIDLISKLLVP  240 (265)
T ss_pred             HHHHHhcCC------------------------cCCCcc------------------------ccCCHHHHHHHHHHhcC
Confidence            544443211                        112210                        11367789999999999


Q ss_pred             CCCCCCCH---HHHhCCccccCCC
Q 015867          378 DPSERLTA---RQALNHPFFRNLN  398 (399)
Q Consensus       378 dP~~R~t~---~ell~hp~f~~~~  398 (399)
                      ||.+|||+   .++++||||++++
T Consensus       241 ~p~~Rpt~~~~~~~l~~~~~~~~~  264 (265)
T cd05579         241 DPEKRLGAKSIEEIKNHPFFKGID  264 (265)
T ss_pred             CHhhcCCCccHHHHhcCccccCCC
Confidence            99999999   9999999999875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7.4e-44  Score=302.66  Aligned_cols=286  Identities=29%  Similarity=0.491  Sum_probs=225.4

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEec---chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--  139 (399)
                      .+.|+.+.+||+|.||.||+|+...+|+.||+|++--   .........+|+++|+.|.|      +|++.+++.+..  
T Consensus        16 ~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkH------env~nliEic~tk~   89 (376)
T KOG0669|consen   16 VSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKH------ENVVNLIEICRTKA   89 (376)
T ss_pred             chHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcc------hhHHHHHHHHhhcc
Confidence            4568899999999999999999999999999987532   23344566779999999875      788887776542  


Q ss_pred             ------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 ------RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                            ...+|+||++|..+|.-++..... +++...++.++.+++.||.|+|...|+|||+|++|+||           
T Consensus        90 Tp~~r~r~t~ylVf~~cehDLaGlLsn~~v-r~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLI-----------  157 (376)
T KOG0669|consen   90 TPTNRDRATFYLVFDFCEHDLAGLLSNRKV-RFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLI-----------  157 (376)
T ss_pred             CCcccccceeeeeHHHhhhhHHHHhcCccc-cccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEE-----------
Confidence                  346999999999999999976543 69999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHh
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~  285 (399)
                                   +.++.+||+|||+++.....       .+..+-|.+|++||.+.|. .|+++.|||..|||+.||++
T Consensus       158 -------------t~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwt  224 (376)
T KOG0669|consen  158 -------------TKDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWT  224 (376)
T ss_pred             -------------cCCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHc
Confidence                         45778999999998542221       2334569999999999876 69999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |.+.|.+.++..++..|....+.+.++.|+++..-.........  +.|.+..        ++   +++....+  .-.+
T Consensus       225 rspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~e--Pl~~~~~--------rk---v~n~~kp~--~kd~  289 (376)
T KOG0669|consen  225 RSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELE--PLPKGQK--------RK---VKNRLKPY--VKDD  289 (376)
T ss_pred             cCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCC--CCCcchh--------hh---hhhhcccc--cCCh
Confidence            99999999999999999999999998887776433222211111  1222111        00   11111111  1145


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ++.||+.+||..||.+|+++.++++|.||..
T Consensus       290 ~a~dLle~ll~~DP~kR~~ad~alnh~~F~k  320 (376)
T KOG0669|consen  290 EALDLLEKLLKLDPTKRIDADQALNHDFFWK  320 (376)
T ss_pred             hHHHHHHHHhccCcccCcchHhhhchhhhhc
Confidence            7789999999999999999999999999974

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=100.00  E-value=1.1e-40  Score=304.67  Aligned_cols=250  Identities=32%  Similarity=0.489  Sum_probs=202.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|++.+.||+|+||.||++.+..+++.|++|.++....   ....+..|+++++.+.      |+||+++++.+...+..
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~------~~~i~~~~~~~~~~~~~   74 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLK------HPNLVKYYGVEVHREKV   74 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCC------CCChhheeeeEecCCEE
Confidence            59999999999999999999988999999999875433   3456677888877775      58999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++|+||+ +++|.+++....  .+++..+..++.|++.||.|||+.||+|+||+|+||+++                   
T Consensus        75 ~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~-------------------  133 (264)
T cd06626          75 YIFMEYCSGGTLEELLEHGR--ILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD-------------------  133 (264)
T ss_pred             EEEEecCCCCcHHHHHhhcC--CCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC-------------------
Confidence            9999999 899999998765  588999999999999999999999999999999999993                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCCC-------cccccCCCccchhhhhCCC---CCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNH-------SSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                           .++.++|+|||++.......       ....++..|+|||++.+..   ++.++||||||+++|++++|..||..
T Consensus       134 -----~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~  208 (264)
T cd06626         134 -----HNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSE  208 (264)
T ss_pred             -----CCCCEEEcccccccccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccC
Confidence                 46779999999876533221       1346788999999998766   89999999999999999999999976


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+........... ...+                     ..|                        ....++..+.+||.
T Consensus       209 ~~~~~~~~~~~~~-~~~~---------------------~~~------------------------~~~~~~~~~~~li~  242 (264)
T cd06626         209 LDNEFQIMFHVGA-GHKP---------------------PIP------------------------DSLQLSPEGKDFLD  242 (264)
T ss_pred             CcchHHHHHHHhc-CCCC---------------------CCC------------------------cccccCHHHHHHHH
Confidence            5432221111110 1000                     011                        11234677889999


Q ss_pred             HccccCCCCCCCHHHHhCCccc
Q 015867          373 GLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      +||+.||.+|||+.+++.|||+
T Consensus       243 ~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         243 RCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             HHccCCcccCCCHHHHhcCCCC
Confidence            9999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=100.00  E-value=4e-41  Score=307.25  Aligned_cols=245  Identities=24%  Similarity=0.368  Sum_probs=201.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.++||+|+||.||+|.+. ++..||+|.+.........+..|+.+++.+.      |+||+++++.+...+..++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05072           6 ESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTMSVQAFLEEANLMKTLQ------HDKLVRLYAVVTKEEPIYI   78 (261)
T ss_pred             HHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCchhHHHHHHHHHHHHhCC------CCCeeeEEEEEcCCCCcEE
Confidence            57999999999999999999864 5567999998754444566778888888875      5999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++.+.....+++..+..++.|++.||+|||+.|++|+||||+||+++                     
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---------------------  137 (261)
T cd05072          79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---------------------  137 (261)
T ss_pred             EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---------------------
Confidence            99999 89999999876555689999999999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                         .++.++|+|||.+.......    ....++..|+|||++.+..++.++|+|||||++|+|++ |..||...+..+..
T Consensus       138 ---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~  214 (261)
T cd05072         138 ---ESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVM  214 (261)
T ss_pred             ---CCCcEEECCCccceecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHH
Confidence               45679999999886543221    22345678999999998889999999999999999998 99999876665554


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.....                         +                        .....++.++.+++.+||..||
T Consensus       215 ~~~~~~~~-------------------------~------------------------~~~~~~~~~~~~li~~~l~~~p  245 (261)
T cd05072         215 SALQRGYR-------------------------M------------------------PRMENCPDELYDIMKTCWKEKA  245 (261)
T ss_pred             HHHHcCCC-------------------------C------------------------CCCCCCCHHHHHHHHHHccCCc
Confidence            44432110                         0                        0112456778999999999999


Q ss_pred             CCCCCHHHHhC
Q 015867          380 SERLTARQALN  390 (399)
Q Consensus       380 ~~R~t~~ell~  390 (399)
                      .+|||++++++
T Consensus       246 ~~Rp~~~~i~~  256 (261)
T cd05072         246 EERPTFDYLQS  256 (261)
T ss_pred             ccCcCHHHHHH
Confidence            99999999865

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=100.00  E-value=1.7e-41  Score=315.84  Aligned_cols=250  Identities=25%  Similarity=0.454  Sum_probs=202.2

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      |.....||.|+||.||++.+..+++.||+|.+.... .....+..|+.+++.+      .|+|++++++.+..++..++|
T Consensus        23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l------~hp~i~~~~~~~~~~~~~~iv   96 (297)
T cd06659          23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDY------QHQNVVEMYKSYLVGEELWVL   96 (297)
T ss_pred             HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhC------CCCchhhhhhheeeCCeEEEE
Confidence            445567999999999999998899999999986422 2234455666666665      469999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|.+++...   .+++..+..++.|++.||.|||++|++|+||||+||++                       
T Consensus        97 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill-----------------------  150 (297)
T cd06659          97 MEFLQGGALTDIVSQT---RLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILL-----------------------  150 (297)
T ss_pred             EecCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEE-----------------------
Confidence            9999 88999987653   48999999999999999999999999999999999999                       


Q ss_pred             CCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                       +.++.++|+|||++.....   ......|+..|+|||++.+..++.++|+|||||++|+|++|..||...+..+....+
T Consensus       151 -~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~  229 (297)
T cd06659         151 -TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL  229 (297)
T ss_pred             -ccCCcEEEeechhHhhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence             3467799999998754322   223457899999999999889999999999999999999999999876655544433


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      .......                                               ......++..+.+||.+||+.||.+|
T Consensus       230 ~~~~~~~-----------------------------------------------~~~~~~~~~~l~~~i~~~l~~~P~~R  262 (297)
T cd06659         230 RDSPPPK-----------------------------------------------LKNAHKISPVLRDFLERMLTREPQER  262 (297)
T ss_pred             hccCCCC-----------------------------------------------ccccCCCCHHHHHHHHHHhcCCcccC
Confidence            2110000                                               00112456678999999999999999


Q ss_pred             CCHHHHhCCccccCC
Q 015867          383 LTARQALNHPFFRNL  397 (399)
Q Consensus       383 ~t~~ell~hp~f~~~  397 (399)
                      |+++++++||||.+.
T Consensus       263 ps~~~ll~~~~~~~~  277 (297)
T cd06659         263 ATAQELLDHPFLLQT  277 (297)
T ss_pred             cCHHHHhhChhhccC
Confidence            999999999999764

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=100.00  E-value=1e-41  Score=321.72  Aligned_cols=294  Identities=16%  Similarity=0.182  Sum_probs=198.4

Q ss_pred             eeeccc--cceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           72 SKMGEG--TFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        72 ~~lG~G--~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      ..||.|  +||+||++++..+|+.||+|++....   ...+.+..|+.+++.+      .|+||++++++|..++..++|
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l------~h~niv~~~~~~~~~~~~~~v   77 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFF------RHPNIMTSWTVFTTGSWLWVI   77 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhC------CCCCcceEeeeEecCCceEEE
Confidence            456666  99999999999999999999986432   2234455666666655      469999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|.+++.+.....+++..+..++.||+.||+|||+.||+||||||+|||+..                     
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~---------------------  136 (328)
T cd08226          78 SPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISG---------------------  136 (328)
T ss_pred             EecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeC---------------------
Confidence            9999 889999998765556999999999999999999999999999999999999953                     


Q ss_pred             CCCCCceEEeecCCcccCCC----------CCcccccCCCccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          226 LPKSSAIKLIDFGSTAFDNQ----------NHSSIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                         ++.++++||+.+.....          ......++..|+|||++.+.  .++.++|||||||++|+|++|..||...
T Consensus       137 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~  213 (328)
T cd08226         137 ---DGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM  213 (328)
T ss_pred             ---CCcEEEechHHHhhhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence               45678888864321100          01112356679999999764  5789999999999999999999999876


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      ........+.......|..... ...........  ...+..+..........................++..+.+||.+
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  290 (328)
T cd08226         214 LRTQMLLQKLKGPPYSPLDITT-FPCEESRMKNS--QSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVEL  290 (328)
T ss_pred             ChHHHHHHHhcCCCCCCccccc-cchhhhhhccc--hhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHH
Confidence            6554443333221111110000 00000000000  00000000000000000000000000111234567889999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ||+.||.+|||+.|+|+||||+++.
T Consensus       291 ~l~~dP~~Rpta~e~l~~~~~~~~~  315 (328)
T cd08226         291 CLQQDPEKRPSASSLLSHAFFKQVK  315 (328)
T ss_pred             HccCCcccCCCHHHHhhCHHHHHHH
Confidence            9999999999999999999998763

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=100.00  E-value=5.4e-41  Score=306.23  Aligned_cols=246  Identities=25%  Similarity=0.378  Sum_probs=200.9

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..++|++.++||+|+||.||+|.. .+++.||+|.+.........+..|+.+++.+.      |+|++++++++. .+..
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~-~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~-~~~~   75 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYY-NGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQ------HPRLVRLYAVVT-QEPI   75 (260)
T ss_pred             chHHceeeeeeccCccceEEeeec-CCCceEEEEEecCCCCcHHHHHHHHHHHHhcC------CcCeeeEEEEEc-cCCc
Confidence            456799999999999999999985 45678999999765555567778888888875      589999998764 4678


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.......+++..+..++.|++.||+|||+.|++|+||||+||+++                   
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~-------------------  136 (260)
T cd05067          76 YIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS-------------------  136 (260)
T ss_pred             EEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc-------------------
Confidence            9999999 89999999876655789999999999999999999999999999999999994                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  297 (399)
                           .++.++|+|||.+......    .....++..|+|||++.+..++.++|+||||+++|++++ |++||.+.+..+
T Consensus       137 -----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~  211 (260)
T cd05067         137 -----ETLCCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPE  211 (260)
T ss_pred             -----CCCCEEEccCcceeecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHH
Confidence                 4667999999987654321    123345678999999998899999999999999999999 999998776655


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+......                                                 ..+..++.++.++|.+||+.
T Consensus       212 ~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~~l~~  242 (260)
T cd05067         212 VIQNLERGYRM-------------------------------------------------PRPDNCPEELYELMRLCWKE  242 (260)
T ss_pred             HHHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHccC
Confidence            54443221100                                                 01123466789999999999


Q ss_pred             CCCCCCCHHHHhC
Q 015867          378 DPSERLTARQALN  390 (399)
Q Consensus       378 dP~~R~t~~ell~  390 (399)
                      ||.+|||++++++
T Consensus       243 ~p~~Rp~~~~l~~  255 (260)
T cd05067         243 KPEERPTFEYLRS  255 (260)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999876

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=100.00  E-value=4.2e-41  Score=309.94  Aligned_cols=248  Identities=28%  Similarity=0.457  Sum_probs=203.3

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      |++.+.||.|+||.||+|.+..+++.||||++....  .....+..|+.++..+.      |+|++++++++..++..++
T Consensus         6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~l   79 (277)
T cd06641           6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD------SPYVTKYYGSYLKDTKLWI   79 (277)
T ss_pred             hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcC------CCCEeEEEEEEEeCCeEEE
Confidence            788999999999999999998899999999876432  23345666777777664      5999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++...   .+++..+..++.|++.+|.+||+.|++|+||||+||+++                     
T Consensus        80 v~e~~~~~~l~~~i~~~---~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---------------------  135 (277)
T cd06641          80 IMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---------------------  135 (277)
T ss_pred             EEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---------------------
Confidence            99999 88999998754   489999999999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM  301 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~  301 (399)
                         .++.++|+|||++......   .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||...........
T Consensus       136 ---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~  212 (277)
T cd06641         136 ---EHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL  212 (277)
T ss_pred             ---CCCCEEEeecccceecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH
Confidence               4667999999987653322   2345688999999999888899999999999999999999999976554443333


Q ss_pred             HHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCC
Q 015867          302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE  381 (399)
Q Consensus       302 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  381 (399)
                      +....  .+                                               .....++.++.++|.+||..||.+
T Consensus       213 ~~~~~--~~-----------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~  243 (277)
T cd06641         213 IPKNN--PP-----------------------------------------------TLEGNYSKPLKEFVEACLNKEPSF  243 (277)
T ss_pred             HhcCC--CC-----------------------------------------------CCCcccCHHHHHHHHHHccCChhh
Confidence            21110  00                                               011245677899999999999999


Q ss_pred             CCCHHHHhCCccccCC
Q 015867          382 RLTARQALNHPFFRNL  397 (399)
Q Consensus       382 R~t~~ell~hp~f~~~  397 (399)
                      ||++.++++||||.+.
T Consensus       244 Rp~~~~~l~~~~~~~~  259 (277)
T cd06641         244 RPTAKELLKHKFIVRF  259 (277)
T ss_pred             CcCHHHHHhCHHHhhh
Confidence            9999999999999753

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=100.00  E-value=3.5e-41  Score=323.54  Aligned_cols=249  Identities=23%  Similarity=0.340  Sum_probs=196.0

Q ss_pred             CCEEEEeeeccccceEEEEEEE-----ccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWD-----RQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||+|+||.||+|.+     ..++..||||+++...  .....+..|+.++..+.     .||||+++++++.
T Consensus        35 ~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~-----~HpnIv~l~~~~~  109 (375)
T cd05104          35 NRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NHINIVNLLGACT  109 (375)
T ss_pred             HHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhc-----CCcceeeeeeeec
Confidence            4799999999999999999964     3467789999986432  23345677888888874     3699999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC------------------------------------------------------
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY------------------------------------------------------  163 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~------------------------------------------------------  163 (399)
                      ..+..++||||+ +|+|.+++.....                                                      
T Consensus       110 ~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  189 (375)
T cd05104         110 VGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSV  189 (375)
T ss_pred             cCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccccc
Confidence            999999999999 9999999865321                                                      


Q ss_pred             -------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          164 -------------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       164 -------------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                                         ..+++..+..++.||+.||+|||++||+||||||+|||++                     
T Consensus       190 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---------------------  248 (375)
T cd05104         190 RSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---------------------  248 (375)
T ss_pred             ccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---------------------
Confidence                               1467888999999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEH  298 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~  298 (399)
                         .+..++|+|||++.......     +...++..|+|||++.+..++.++|||||||++|+|++ |..||........
T Consensus       249 ---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~  325 (375)
T cd05104         249 ---HGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSK  325 (375)
T ss_pred             ---CCCcEEEecCccceeccCcccccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHH
Confidence               35679999999886533221     22334667999999999999999999999999999998 8999977554333


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ..++......                                                ...+...+.++.+||.+||+.|
T Consensus       326 ~~~~~~~~~~------------------------------------------------~~~~~~~~~~l~~li~~cl~~d  357 (375)
T cd05104         326 FYKMIKEGYR------------------------------------------------MLSPECAPSEMYDIMKSCWDAD  357 (375)
T ss_pred             HHHHHHhCcc------------------------------------------------CCCCCCCCHHHHHHHHHHccCC
Confidence            2222111000                                                0011234567899999999999


Q ss_pred             CCCCCCHHHHhCC
Q 015867          379 PSERLTARQALNH  391 (399)
Q Consensus       379 P~~R~t~~ell~h  391 (399)
                      |.+|||+.|+++.
T Consensus       358 P~~RPs~~eil~~  370 (375)
T cd05104         358 PLKRPTFKQIVQL  370 (375)
T ss_pred             hhHCcCHHHHHHH
Confidence            9999999999863

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=100.00  E-value=6.3e-42  Score=315.41  Aligned_cols=248  Identities=28%  Similarity=0.458  Sum_probs=201.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .|++.+.||+|+||.||+|.+..+++.||+|.+....  .....+..|+++++.+      .|+||+++++.+...+..|
T Consensus         5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~~~~~~   78 (277)
T cd06642           5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSPYITRYYGSYLKGTKLW   78 (277)
T ss_pred             HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcC------CCCccHhhhcccccCCceE
Confidence            4777889999999999999998899999999986432  2334566677777766      4699999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++...   .+++..+..++.||+.||.|||++|++|+||+|+||++.                    
T Consensus        79 lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~--------------------  135 (277)
T cd06642          79 IIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS--------------------  135 (277)
T ss_pred             EEEEccCCCcHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe--------------------
Confidence            999999 88999988653   489999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                          .++.++|+|||++......   .....|+..|+|||++.+..++.++|+||||+++|+|++|..||..........
T Consensus       136 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~  211 (277)
T cd06642         136 ----EQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLF  211 (277)
T ss_pred             ----CCCCEEEccccccccccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHh
Confidence                4567999999987653322   123468899999999999899999999999999999999999997654433322


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+....                          .+                       .....++.++.+||.+||+.||.
T Consensus       212 ~~~~~~--------------------------~~-----------------------~~~~~~~~~~~~li~~~l~~~p~  242 (277)
T cd06642         212 LIPKNS--------------------------PP-----------------------TLEGQYSKPFKEFVEACLNKDPR  242 (277)
T ss_pred             hhhcCC--------------------------CC-----------------------CCCcccCHHHHHHHHHHccCCcc
Confidence            211100                          00                       01123566789999999999999


Q ss_pred             CCCCHHHHhCCccccC
Q 015867          381 ERLTARQALNHPFFRN  396 (399)
Q Consensus       381 ~R~t~~ell~hp~f~~  396 (399)
                      +|||+.++++||||..
T Consensus       243 ~Rp~~~~il~~~~~~~  258 (277)
T cd06642         243 FRPTAKELLKHKFITR  258 (277)
T ss_pred             cCcCHHHHHHhHHHHH
Confidence            9999999999999975

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=100.00  E-value=6.6e-41  Score=304.97  Aligned_cols=244  Identities=24%  Similarity=0.354  Sum_probs=199.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.+.||+|+||.||++... .+..+|+|.+.........+..|+++++.+.      |+||+++++++...+..++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~i   76 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMSEEDFIEEAKVMMKLS------HPKLVQLYGVCTQQKPLYI   76 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCccHHHHHHHHHHHHHCC------CCCceeEEEEEccCCCEEE
Confidence            45899999999999999999765 4557999988754444566778999998875      5999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++..... .+++..+..++.|++.||+|||++||+|+||||+||+++                     
T Consensus        77 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---------------------  134 (256)
T cd05114          77 VTEFMENGCLLNYLRQRQG-KLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---------------------  134 (256)
T ss_pred             EEEcCCCCcHHHHHHhCcc-CCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---------------------
Confidence            99999 8999999976443 589999999999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                         .++.++|+|||.+.......    ....++..|+|||++.+..++.++|+||||+++|+|++ |+.||...+..+..
T Consensus       135 ---~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~  211 (256)
T cd05114         135 ---STGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVV  211 (256)
T ss_pred             ---CCCeEEECCCCCccccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence               45679999999876532211    12235668999999998899999999999999999999 99999887766665


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......                       ..                          +...+..+.+|+.+||+.||
T Consensus       212 ~~i~~~~~~-----------------------~~--------------------------~~~~~~~~~~li~~c~~~~p  242 (256)
T cd05114         212 EMISRGFRL-----------------------YR--------------------------PKLASMTVYEVMYSCWHEKP  242 (256)
T ss_pred             HHHHCCCCC-----------------------CC--------------------------CCCCCHHHHHHHHHHccCCc
Confidence            555332110                       00                          11235567899999999999


Q ss_pred             CCCCCHHHHhC
Q 015867          380 SERLTARQALN  390 (399)
Q Consensus       380 ~~R~t~~ell~  390 (399)
                      .+|||++++++
T Consensus       243 ~~Rps~~~l~~  253 (256)
T cd05114         243 EGRPTFAELLR  253 (256)
T ss_pred             ccCcCHHHHHH
Confidence            99999999975

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=100.00  E-value=1.1e-40  Score=308.90  Aligned_cols=255  Identities=24%  Similarity=0.366  Sum_probs=199.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|++.+.||+|+||.||+|...     ..+..||+|.+.....  ....+..|..+++.+.      |+||+++++++
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~   78 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFT------CHHVVRLLGVV   78 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCC------CCCeeeEEEEE
Confidence            468999999999999999998754     2356899998764321  2233455666666654      58999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKY--------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      ...+..|+||||+ +++|.+++.+...        ...+...+..++.|++.||.|||++||+||||||+|||++     
T Consensus        79 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~-----  153 (288)
T cd05061          79 SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA-----  153 (288)
T ss_pred             cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc-----
Confidence            9999999999999 9999999976321        2356678889999999999999999999999999999994     


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHH
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  283 (399)
                                         .++.++|+|||++.......     ....++..|+|||.+.+..++.++|+|||||++|+|
T Consensus       154 -------------------~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el  214 (288)
T cd05061         154 -------------------HDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEI  214 (288)
T ss_pred             -------------------CCCcEEECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHH
Confidence                               46679999999876432211     223456789999999988999999999999999999


Q ss_pred             Hh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh
Q 015867          284 CT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR  362 (399)
Q Consensus       284 l~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (399)
                      ++ |..||.+.+..+....+.....                       .                          .....
T Consensus       215 ~~~~~~p~~~~~~~~~~~~~~~~~~-----------------------~--------------------------~~~~~  245 (288)
T cd05061         215 TSLAEQPYQGLSNEQVLKFVMDGGY-----------------------L--------------------------DQPDN  245 (288)
T ss_pred             HhCCCCCCCCCCHHHHHHHHHcCCC-----------------------C--------------------------CCCCC
Confidence            98 8899987665554433321100                       0                          01123


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhC------CccccCCC
Q 015867          363 ARSTLTDLLHGLLRYDPSERLTARQALN------HPFFRNLN  398 (399)
Q Consensus       363 ~~~~~~~li~~~L~~dP~~R~t~~ell~------hp~f~~~~  398 (399)
                      ++..+.+++.+||+.||.+|||+.++++      ||||.+++
T Consensus       246 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~~  287 (288)
T cd05061         246 CPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVS  287 (288)
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCCC
Confidence            4567899999999999999999999987      99999875

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=100.00  E-value=4e-41  Score=310.93  Aligned_cols=247  Identities=21%  Similarity=0.308  Sum_probs=200.8

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCC-----eEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQ-----ERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||+|+||.||+|.....+     ..||+|.+....  .....+..|+.++..+.      |+||+++++++.
T Consensus         5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~   78 (283)
T cd05048           5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQ------HPNIVCLLGVCT   78 (283)
T ss_pred             HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcC------CcccceEEEEEc
Confidence            46999999999999999999876554     789999986432  23345667888877765      599999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY--------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLV  203 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~  203 (399)
                      ..+..+++|||+ +++|.+++.....              ..+++..+..++.||+.||.|||+.|++|+||||+||+++
T Consensus        79 ~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~  158 (283)
T cd05048          79 KEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG  158 (283)
T ss_pred             CCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc
Confidence            999999999999 8999999976421              3588899999999999999999999999999999999994


Q ss_pred             ecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCCCCcchhHHHHH
Q 015867          204 SSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGC  278 (399)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  278 (399)
                                              .++.++|+|||++.....     ......+++.|+|||.+.+..++.++|||||||
T Consensus       159 ------------------------~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~  214 (283)
T cd05048         159 ------------------------EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGV  214 (283)
T ss_pred             ------------------------CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHH
Confidence                                    456799999998764321     123345688899999999889999999999999


Q ss_pred             HHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhh
Q 015867          279 ILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS  357 (399)
Q Consensus       279 il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      ++|||++ |..||.+....+....+......                                                 
T Consensus       215 il~el~~~g~~p~~~~~~~~~~~~i~~~~~~-------------------------------------------------  245 (283)
T cd05048         215 VLWEIFSYGLQPYYGFSNQEVIEMIRSRQLL-------------------------------------------------  245 (283)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-------------------------------------------------
Confidence            9999998 99999887766555444322110                                                 


Q ss_pred             ccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       358 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      ..+..++.++.+|+.+||+.||.+|||+.|++++
T Consensus       246 ~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         246 PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            1123567889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=100.00  E-value=1.9e-40  Score=304.01  Aligned_cols=248  Identities=27%  Similarity=0.421  Sum_probs=195.8

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEc
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE  148 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e  148 (399)
                      ....||+|+||.||+|.+..++..||+|.+.... .....+..|+.+++.++      |+||+++++++..++..++|||
T Consensus        12 ~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~e   85 (268)
T cd06624          12 ERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLK------HRNIVQYLGSDSENGFFKIFME   85 (268)
T ss_pred             ceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcC------CCCeeeeeeeeccCCEEEEEEe
Confidence            3467999999999999998899999999886432 23345677888887775      5999999999999999999999


Q ss_pred             cC-CCCHHHHHHhcCCCCC--CHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          149 KL-GPSLFDFLKRNKYCPF--PVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       149 ~~-~~~L~~~l~~~~~~~~--~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |+ +++|.+++..... .+  +...+..++.||+.||+|||++||+||||||+||+++.                     
T Consensus        86 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~---------------------  143 (268)
T cd06624          86 QVPGGSLSALLRSKWG-PLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT---------------------  143 (268)
T ss_pred             cCCCCCHHHHHHHhcc-cCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC---------------------
Confidence            99 8999999986532 34  78889999999999999999999999999999999942                     


Q ss_pred             CCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                        ..+.++|+|||.+.....   ......|+..|+|||++.+.  .++.++|+||||+++|+|++|..||..........
T Consensus       144 --~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~  221 (268)
T cd06624         144 --YSGVVKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAM  221 (268)
T ss_pred             --CCCeEEEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhH
Confidence              245799999998765322   12334689999999998764  38899999999999999999999997543321111


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .......                                               .....+..++.++.+|+.+||..||.
T Consensus       222 ~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~~p~  254 (268)
T cd06624         222 FKVGMFK-----------------------------------------------IHPEIPESLSAEAKNFILRCFEPDPD  254 (268)
T ss_pred             hhhhhhc-----------------------------------------------cCCCCCcccCHHHHHHHHHHcCCCch
Confidence            0000000                                               00011234567889999999999999


Q ss_pred             CCCCHHHHhCCccc
Q 015867          381 ERLTARQALNHPFF  394 (399)
Q Consensus       381 ~R~t~~ell~hp~f  394 (399)
                      +|||+.|++.||||
T Consensus       255 ~Rpt~~~ll~~~~~  268 (268)
T cd06624         255 KRASAHDLLQDPFL  268 (268)
T ss_pred             hCCCHHHHHhCCCC
Confidence            99999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=100.00  E-value=1e-40  Score=308.81  Aligned_cols=256  Identities=29%  Similarity=0.470  Sum_probs=211.2

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ...+.|++.+.||+|++|.||++.+..++..|++|++.........+..|+++++.+.      |+|++++++.+...+.
T Consensus        16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~   89 (286)
T cd06614          16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCK------HPNIVDYYDSYLVGDE   89 (286)
T ss_pred             CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCC------CCCeeEEEEEEEECCE
Confidence            3456799999999999999999999888999999999765444456677888887775      5899999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++|+||+ +++|.+++.... ..++...+..++.|++.||.|||+.||+|+||||+||+++                  
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~------------------  150 (286)
T cd06614          90 LWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS------------------  150 (286)
T ss_pred             EEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc------------------
Confidence            99999999 799999998765 2599999999999999999999999999999999999993                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                            .++.++|+|||.+......   .....++..|+|||++.+..++.++|+||||+++|+|++|..||...+....
T Consensus       151 ------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~  224 (286)
T cd06614         151 ------KDGSVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRA  224 (286)
T ss_pred             ------CCCCEEECccchhhhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                  4667999999986543222   2344578899999999988899999999999999999999999987665544


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.....  +.                                             ......++..+.+||.+||+.|
T Consensus       225 ~~~~~~~~~--~~---------------------------------------------~~~~~~~~~~l~~li~~~l~~~  257 (286)
T cd06614         225 LFLITTKGI--PP---------------------------------------------LKNPEKWSPEFKDFLNKCLVKD  257 (286)
T ss_pred             HHHHHhcCC--CC---------------------------------------------CcchhhCCHHHHHHHHHHhccC
Confidence            333322100  00                                             0011235677899999999999


Q ss_pred             CCCCCCHHHHhCCccccC
Q 015867          379 PSERLTARQALNHPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~  396 (399)
                      |.+|||+.++++||||++
T Consensus       258 p~~Rpt~~~il~~~~~~~  275 (286)
T cd06614         258 PEKRPSAEELLQHPFLKK  275 (286)
T ss_pred             hhhCcCHHHHhhChHhhc
Confidence            999999999999999987

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.7e-42  Score=325.06  Aligned_cols=246  Identities=28%  Similarity=0.452  Sum_probs=208.1

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.+.|.+...+|.|+|+.|-.+.+..+++.+++|++.+.   ......|..++....     +|+|++.+.+.+.+..+
T Consensus       319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~---~~~~~~e~~~~~~~~-----~h~niv~~~~v~~~~~~  390 (612)
T KOG0603|consen  319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR---ADDNQDEIPISLLVR-----DHPNIVKSHDVYEDGKE  390 (612)
T ss_pred             CcchhhccccccCCCCccceeeeeccccccchhheecccc---ccccccccchhhhhc-----CCCcceeecceecCCce
Confidence            3567899999999999999999999999999999998654   233445666666655     58999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .|+|||.+ |+.+.+.+...+   .....+..|+.+|+.|+.|||++|+|||||||+|||+.                  
T Consensus       391 ~~~v~e~l~g~ell~ri~~~~---~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~------------------  449 (612)
T KOG0603|consen  391 IYLVMELLDGGELLRRIRSKP---EFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD------------------  449 (612)
T ss_pred             eeeeehhccccHHHHHHHhcc---hhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec------------------
Confidence            99999999 888888777665   33377888999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH-HHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL-EHLA  300 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~  300 (399)
                           +..++++|+|||.+...+....+.+-|..|.|||++....|++++||||||++||+||+|+.||...... ++..
T Consensus       450 -----~~~g~lrltyFG~a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~  524 (612)
T KOG0603|consen  450 -----GSAGHLRLTYFGFWSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT  524 (612)
T ss_pred             -----CCCCcEEEEEechhhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHH
Confidence                 2467799999999887666655667789999999999999999999999999999999999999876554 4443


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      +|...    +                                                ....+|..++|||++||+.||.
T Consensus       525 ~i~~~----~------------------------------------------------~s~~vS~~AKdLl~~LL~~dP~  552 (612)
T KOG0603|consen  525 RIQMP----K------------------------------------------------FSECVSDEAKDLLQQLLQVDPA  552 (612)
T ss_pred             hhcCC----c------------------------------------------------cccccCHHHHHHHHHhccCChh
Confidence            33211    0                                                0146789999999999999999


Q ss_pred             CCCCHHHHhCCccc
Q 015867          381 ERLTARQALNHPFF  394 (399)
Q Consensus       381 ~R~t~~ell~hp~f  394 (399)
                      +|+|+.+++.||||
T Consensus       553 ~Rl~~~~i~~h~w~  566 (612)
T KOG0603|consen  553 LRLGADEIGAHPWF  566 (612)
T ss_pred             hCcChhhhccCcch
Confidence            99999999999999

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=100.00  E-value=3.8e-41  Score=310.53  Aligned_cols=246  Identities=20%  Similarity=0.303  Sum_probs=200.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|.+.+.||+|+||.||+|.+.     .+++.||||.++....  ....+..|+++++.+.      |+||+++++++.
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~   78 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQ------HENIVKFYGVCT   78 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcC------CCCchheeeEEe
Confidence            46899999999999999999864     3467899999865332  2456777888888775      589999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeec
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSS  205 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~  205 (399)
                      .....++||||+ +++|.+++...+.            ..+++..+..++.|++.||.|||++|++||||||+||+++  
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~--  156 (280)
T cd05049          79 EGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG--  156 (280)
T ss_pred             cCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc--
Confidence            999999999999 9999999976531            3478889999999999999999999999999999999994  


Q ss_pred             ccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHH
Q 015867          206 EFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  280 (399)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  280 (399)
                                            .++.++|+|||++......     .....++..|+|||++.+..++.++|||||||++
T Consensus       157 ----------------------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  214 (280)
T cd05049         157 ----------------------YDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVL  214 (280)
T ss_pred             ----------------------CCCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHH
Confidence                                  4678999999987643211     1233457889999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhcc
Q 015867          281 VELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH  359 (399)
Q Consensus       281 ~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  359 (399)
                      |+|++ |..||...+..+....+......                                                 ..
T Consensus       215 ~e~~~~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------------------------~~  245 (280)
T cd05049         215 WEIFTYGKQPWYGLSNEEVIECITQGRLL-------------------------------------------------QR  245 (280)
T ss_pred             HHHHhcCCCCCCCCCHHHHHHHHHcCCcC-------------------------------------------------CC
Confidence            99998 99999877665554444321110                                                 11


Q ss_pred             chhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          360 VDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       360 ~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      +..++..+.+||.+||+.||.+|||+.|+++
T Consensus       246 ~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         246 PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            1245678899999999999999999999975

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.3e-40  Score=300.40  Aligned_cols=247  Identities=32%  Similarity=0.489  Sum_probs=206.4

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|++.+.||+|++|.||++.+..+++.|++|.+....   .....+..|++++..+.      |++++++++++.+.+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~   74 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLK------HPNIVKYIGSIETSDSL   74 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCC------CCCccEEEEEEEeCCEE
Confidence            5899999999999999999999899999999997644   23455667777777765      58999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++....  .+++..+..++.|++.||.+||+.||+|+||||+||+++                   
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~-------------------  133 (254)
T cd06627          75 YIILEYAENGSLRQIIKKFG--PFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT-------------------  133 (254)
T ss_pred             EEEEecCCCCcHHHHHHhcc--CCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC-------------------
Confidence            9999999 889999998764  699999999999999999999999999999999999993                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           .++.++|+|||.+.......   ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+.....
T Consensus       134 -----~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~  208 (254)
T cd06627         134 -----KDGVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAAL  208 (254)
T ss_pred             -----CCCCEEEeccccceecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHH
Confidence                 46679999999887644332   2456889999999998888999999999999999999999999876544433


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+...  ..                                               ...+..++..+.++|.+||..||
T Consensus       209 ~~~~~~--~~-----------------------------------------------~~~~~~~~~~~~~~i~~~l~~~p  239 (254)
T cd06627         209 FRIVQD--DH-----------------------------------------------PPLPEGISPELKDFLMQCFQKDP  239 (254)
T ss_pred             HHHhcc--CC-----------------------------------------------CCCCCCCCHHHHHHHHHHHhCCh
Confidence            332210  00                                               01113456788999999999999


Q ss_pred             CCCCCHHHHhCCccc
Q 015867          380 SERLTARQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~~ell~hp~f  394 (399)
                      ++|||+.+++.||||
T Consensus       240 ~~R~~~~~~l~~~~~  254 (254)
T cd06627         240 NLRPTAKQLLKHPWI  254 (254)
T ss_pred             hhCcCHHHHhcCCCC
Confidence            999999999999998

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=100.00  E-value=1.3e-40  Score=306.74  Aligned_cols=251  Identities=19%  Similarity=0.281  Sum_probs=200.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEcc-----CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQ-----TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|.+.+.||+|+||.||+|.+..     ++..||+|.+....  .....+..|+.+++.+.      |+||+++++++
T Consensus         5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~   78 (277)
T cd05036           5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFN------HQNIVRLIGVS   78 (277)
T ss_pred             HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEE
Confidence            3569999999999999999999876     77889999886432  22345666777777765      58999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKY-----CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~  211 (399)
                      .+.+..++||||+ +++|.+++...+.     ..+++..+..++.||+.||+|||++|++|+||||+||+++.++     
T Consensus        79 ~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~-----  153 (277)
T cd05036          79 FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKG-----  153 (277)
T ss_pred             ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccC-----
Confidence            9888999999999 9999999976542     2488999999999999999999999999999999999996532     


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-  285 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-  285 (399)
                                      ....++|+|||++.......     ....++..|+|||++.+..++.++|||||||++|+|++ 
T Consensus       154 ----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~  217 (277)
T cd05036         154 ----------------PGRVAKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSL  217 (277)
T ss_pred             ----------------CCcceEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcC
Confidence                            24568999999887542211     12233567999999999899999999999999999997 


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |..||...+..+....+.....                                                 ...+..++.
T Consensus       218 g~~pf~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~  248 (277)
T cd05036         218 GYMPYPGRTNQEVMEFVTGGGR-------------------------------------------------LDPPKGCPG  248 (277)
T ss_pred             CCCCCCCCCHHHHHHHHHcCCc-------------------------------------------------CCCCCCCCH
Confidence            9999987666544333321100                                                 011234567


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      .+.+|+.+||+.||.+|||+.++++|
T Consensus       249 ~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         249 PVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            78999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=100.00  E-value=3e-40  Score=298.87  Aligned_cols=249  Identities=31%  Similarity=0.515  Sum_probs=207.3

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      +|.+.+.||+|++|.||++.+..+++.+++|++..... ....+..|+++++.+.      |++++++++.+...+..++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~l   74 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCK------HPNIVKYYGSYLKKDELWI   74 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCC------CCCEeEEEEEEecCCeEEE
Confidence            48899999999999999999988999999999976433 4456777888887775      5899999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ++||+ +++|.+++.... ..+++..+..++.|++.||.+||+.|++|+||+|+||+++                     
T Consensus        75 ~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---------------------  132 (253)
T cd05122          75 VMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---------------------  132 (253)
T ss_pred             EEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---------------------
Confidence            99999 799999998763 2689999999999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC--cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                         .++.++|+|||.+.......  ....|+..|+|||.+.+..++.++|+||||+++|+|++|..||...+..+....+
T Consensus       133 ---~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~  209 (253)
T cd05122         133 ---SDGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKI  209 (253)
T ss_pred             ---cCCeEEEeeccccccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHH
Confidence               46679999999887655443  5667899999999999888999999999999999999999999876544443332


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      ...  ..+.                     .                        .....++..+.+||.+||+.||.+|
T Consensus       210 ~~~--~~~~---------------------~------------------------~~~~~~~~~~~~~i~~~l~~~p~~R  242 (253)
T cd05122         210 ATN--GPPG---------------------L------------------------RNPEKWSDEFKDFLKKCLQKNPEKR  242 (253)
T ss_pred             Hhc--CCCC---------------------c------------------------CcccccCHHHHHHHHHHccCChhhC
Confidence            220  0000                     0                        0111236778999999999999999


Q ss_pred             CCHHHHhCCcc
Q 015867          383 LTARQALNHPF  393 (399)
Q Consensus       383 ~t~~ell~hp~  393 (399)
                      ||+.++++|||
T Consensus       243 ~t~~~~l~~~~  253 (253)
T cd05122         243 PTAEQLLKHPF  253 (253)
T ss_pred             CCHHHHhcCCC
Confidence            99999999999

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=100.00  E-value=1.5e-40  Score=303.80  Aligned_cols=245  Identities=28%  Similarity=0.367  Sum_probs=197.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .++|++.++||+|+||.||+|.+..++ .||+|.++........+..|+++++.+.      |+||+++++.+. ++..+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~~~~~~-~~~~~   76 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQLYAVVS-EEPIY   76 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCc-eEEEEecccCccCHHHHHHHHHHHHhCC------CCCcceEEEEEC-CCCcE
Confidence            457999999999999999999876554 5999999764444456778888888875      589999998774 45689


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++.+.....+++..+..++.|++.||+|||+.|++|+||||+||+++                    
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~--------------------  136 (262)
T cd05071          77 IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG--------------------  136 (262)
T ss_pred             EEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc--------------------
Confidence            999999 88999999875544689999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~  298 (399)
                          .++.++|+|||.+.......    ....++..|+|||++.+..++.++|+||||+++|+|++ |..||......+.
T Consensus       137 ----~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~  212 (262)
T cd05071         137 ----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV  212 (262)
T ss_pred             ----CCCcEEeccCCceeeccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH
Confidence                46679999999886533222    22345678999999998899999999999999999999 8999987665554


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+..... .                                                .....++..+.+||.+||+.|
T Consensus       213 ~~~~~~~~~-~------------------------------------------------~~~~~~~~~l~~li~~~l~~~  243 (262)
T cd05071         213 LDQVERGYR-M------------------------------------------------PCPPECPESLHDLMCQCWRKE  243 (262)
T ss_pred             HHHHhcCCC-C------------------------------------------------CCccccCHHHHHHHHHHccCC
Confidence            443321100 0                                                011245677899999999999


Q ss_pred             CCCCCCHHHHhC
Q 015867          379 PSERLTARQALN  390 (399)
Q Consensus       379 P~~R~t~~ell~  390 (399)
                      |.+|||++++++
T Consensus       244 p~~Rp~~~~~~~  255 (262)
T cd05071         244 PEERPTFEYLQA  255 (262)
T ss_pred             cccCCCHHHHHH
Confidence            999999999865

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=100.00  E-value=1.5e-40  Score=302.76  Aligned_cols=245  Identities=24%  Similarity=0.349  Sum_probs=197.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.+.||+|+||.||++.+.. +..+|||.+.........+..|+.+++.+.      |+||+++++++...+..++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~-~~~~aik~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~l   76 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSMSEDEFIEEAKVMMKLS------HEKLVQLYGVCTKQRPIYI   76 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecC-CCcEEEEEcCCCcccHHHHHHHHHHHhcCC------CCCeeeEEEEEccCCCcEE
Confidence            469999999999999999997643 446999988754444456777888877764      5999999999999899999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++..... .+++..+..++.||+.||+|||+.|++|+||||+||+++                     
T Consensus        77 v~e~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---------------------  134 (256)
T cd05113          77 VTEYMSNGCLLNYLREHGK-RFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---------------------  134 (256)
T ss_pred             EEEcCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---------------------
Confidence            99999 8999999987543 589999999999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                         .++.+||+|||.+.......    ....++..|+|||++.+..++.++|+||||+++|+|++ |..||...+..+..
T Consensus       135 ---~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~  211 (256)
T cd05113         135 ---DQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETV  211 (256)
T ss_pred             ---CCCCEEECCCccceecCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHH
Confidence               46679999999876432221    12235567999999998889999999999999999998 99999876665544


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.......                                                 .....+..+.+++.+||+.||
T Consensus       212 ~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~li~~cl~~~p  242 (256)
T cd05113         212 EKVSQGLRLY-------------------------------------------------RPHLASEKVYAIMYSCWHEKA  242 (256)
T ss_pred             HHHhcCCCCC-------------------------------------------------CCCCCCHHHHHHHHHHcCCCc
Confidence            4443221100                                                 012346778999999999999


Q ss_pred             CCCCCHHHHhCC
Q 015867          380 SERLTARQALNH  391 (399)
Q Consensus       380 ~~R~t~~ell~h  391 (399)
                      .+|||+.+++.+
T Consensus       243 ~~Rp~~~~ll~~  254 (256)
T cd05113         243 EERPTFQQLLSS  254 (256)
T ss_pred             ccCCCHHHHHHh
Confidence            999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=100.00  E-value=5.5e-41  Score=317.65  Aligned_cols=249  Identities=20%  Similarity=0.313  Sum_probs=193.8

Q ss_pred             CCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||.|+||.||+|.+.     .+++.||+|+++...  .....+..|+++++.+.     .|+||+++++++.
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~-----~h~niv~~~~~~~   81 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIG-----HHLNVVNLLGACT   81 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhc-----cCcchhheeeeEe
Confidence            47999999999999999999743     345789999986432  22345566888887773     3689999998775


Q ss_pred             c-CCeEEEEEccC-CCCHHHHHHhcCC-----------------------------------------------------
Q 015867          139 Y-RNHICIVFEKL-GPSLFDFLKRNKY-----------------------------------------------------  163 (399)
Q Consensus       139 ~-~~~~~lv~e~~-~~~L~~~l~~~~~-----------------------------------------------------  163 (399)
                      . +..+++||||+ +++|.+++.....                                                     
T Consensus        82 ~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (337)
T cd05054          82 KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEE  161 (337)
T ss_pred             cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchh
Confidence            4 56789999999 9999999865321                                                     


Q ss_pred             ------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeec
Q 015867          164 ------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF  237 (399)
Q Consensus       164 ------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Df  237 (399)
                            ..+++..+..++.||+.||+|||++||+||||||+|||++                        .++.++|+||
T Consensus       162 ~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~------------------------~~~~vkL~Df  217 (337)
T cd05054         162 GDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS------------------------ENNVVKICDF  217 (337)
T ss_pred             hhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe------------------------CCCcEEEecc
Confidence                  2578899999999999999999999999999999999994                        3567999999


Q ss_pred             CCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCH
Q 015867          238 GSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPE  311 (399)
Q Consensus       238 g~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~  311 (399)
                      |++......     .+...++..|+|||++.+..++.++|||||||++|+|++ |..||.+....+...........   
T Consensus       218 G~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~---  294 (337)
T cd05054         218 GLARDIYKDPDYVRKGDARLPLKWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTR---  294 (337)
T ss_pred             ccchhcccCcchhhccCCCCCccccCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCC---
Confidence            998753221     223456778999999999999999999999999999998 99999764443322211110000   


Q ss_pred             HHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          312 HMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                                                                   ...+..++.++.+++.+||+.+|.+||++.|+++|
T Consensus       295 ---------------------------------------------~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~  329 (337)
T cd05054         295 ---------------------------------------------MRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI  329 (337)
T ss_pred             ---------------------------------------------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                                                         00112346678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=100.00  E-value=2.2e-40  Score=300.99  Aligned_cols=249  Identities=30%  Similarity=0.537  Sum_probs=207.1

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|.+.+.||.|+||.||++.+..+++.|++|++....   .....+..|+++++.+.      |+|++++.+.+...+..
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~~~~~~~~~~~~~~~   74 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLN------HPNIIKYYESFEEKGKL   74 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcC------CCChhheEEEEecCCEE
Confidence            5899999999999999999999899999999986532   33455677888887775      58999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ++|||++ +++|.+++....  ...+++..+..++.|++.||.+||+.|++|+||+|+||+++                 
T Consensus        75 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~-----------------  137 (258)
T cd08215          75 CIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT-----------------  137 (258)
T ss_pred             EEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc-----------------
Confidence            9999999 889999998753  24699999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                             .++.++|+|||.+......   .....|++.|+|||.+.+..++.++|+||+|+++|+|++|..||...+..+
T Consensus       138 -------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~  210 (258)
T cd08215         138 -------SNGLVKLGDFGISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLE  210 (258)
T ss_pred             -------CCCcEEECCccceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHH
Confidence                   4567999999987653332   234578999999999999899999999999999999999999998766544


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+.....                                                 ...+..++.++.++|.+||..
T Consensus       211 ~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~i~~~l~~  241 (258)
T cd08215         211 LALKILKGQY-------------------------------------------------PPIPSQYSSELRNLVSSLLQK  241 (258)
T ss_pred             HHHHHhcCCC-------------------------------------------------CCCCCCCCHHHHHHHHHHcCC
Confidence            4333321100                                                 001124567789999999999


Q ss_pred             CCCCCCCHHHHhCCccc
Q 015867          378 DPSERLTARQALNHPFF  394 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f  394 (399)
                      ||.+|||+.++|+||||
T Consensus       242 ~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         242 DPEERPSIAQILQSPFI  258 (258)
T ss_pred             ChhhCcCHHHHhcCCCC
Confidence            99999999999999998

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=100.00  E-value=1.6e-42  Score=290.70  Aligned_cols=279  Identities=27%  Similarity=0.527  Sum_probs=220.9

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC--C
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR--N  141 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~--~  141 (399)
                      -.++|++.+++|+|-|++||.|.+..+++.++||+++...  .+...+|+.||+.|.     +++||+.+++...+.  .
T Consensus        36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--kkKIkREikIL~nL~-----gg~NIi~L~DiV~Dp~Sk  108 (338)
T KOG0668|consen   36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--KKKIKREIKILQNLR-----GGPNIIKLLDIVKDPESK  108 (338)
T ss_pred             ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--HHHHHHHHHHHHhcc-----CCCCeeehhhhhcCcccc
Confidence            3468999999999999999999999999999999997643  367788999999987     679999999988774  5


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ...||+||+ ..+...+..     .++...++.++.|++.||.|||++||+|||+||.|++|+.                
T Consensus       109 tpaLiFE~v~n~Dfk~ly~-----tl~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh----------------  167 (338)
T KOG0668|consen  109 TPSLIFEYVNNTDFKQLYP-----TLTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDH----------------  167 (338)
T ss_pred             CchhHhhhhccccHHHHhh-----hhchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeech----------------
Confidence            789999999 555554433     4788889999999999999999999999999999999953                


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCC--cccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCC-CCCCcH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALF-QTHENL  296 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf-~~~~~~  296 (399)
                             ....++|+|||+|.+.....  +..+.+..|--||.+..- .|+.+-|+|||||++..|+..+-|| .+.++.
T Consensus       168 -------~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~  240 (338)
T KOG0668|consen  168 -------ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY  240 (338)
T ss_pred             -------hhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCH
Confidence                   46779999999999855443  455678899999999764 6899999999999999999977665 789999


Q ss_pred             HHHHHHHHHhCCCCHHHHHH---hcccc----cccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          297 EHLAMMERALGPLPEHMIRR---ASRGT----EKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~---~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      +++-+|.+.+|.-  ++..-   ..-..    .....+.++..|-.                  ...+...--+++++.|
T Consensus       241 DQLVkIakVLGt~--el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~------------------Fi~~~n~hl~~peaiD  300 (338)
T KOG0668|consen  241 DQLVKIAKVLGTD--ELYAYLNKYQIDLDPQFEDILGRHSRKPWSR------------------FINSENQHLVSPEAID  300 (338)
T ss_pred             HHHHHHHHHhChH--HHHHHHHHHccCCChhHhhHhhccccccHHH------------------hCCccccccCChHHHH
Confidence            9999999988752  22111   11111    11122233333321                  1122222345688999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      |+.++|..|-.+|+||.|++.||||..+
T Consensus       301 lldklLrYDHqeRlTakEam~HpyF~~~  328 (338)
T KOG0668|consen  301 LLDKLLRYDHQERLTAKEAMAHPYFAPV  328 (338)
T ss_pred             HHHHHHhhccccccchHHHhcCchHHHH
Confidence            9999999999999999999999999764

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=9.1e-42  Score=323.35  Aligned_cols=250  Identities=23%  Similarity=0.416  Sum_probs=208.0

Q ss_pred             CCE-EEEeeeccccceEEEEEEEccCCeEEEEEEEec-----chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRY-KILSKMGEGTFGRVLECWDRQTQERVAIKVVRS-----IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y-~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ++| +....||+|+|-+||+|.|..+|..||.-.++.     .......+..|+.+|+.|+      |+||++++++|.+
T Consensus        39 gRy~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~------H~NIirfy~SW~d  112 (632)
T KOG0584|consen   39 GRYLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLK------HPNIIRFYDSWVD  112 (632)
T ss_pred             CceeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCC------CCceeeeeeheec
Confidence            445 556789999999999999999999999866542     2333467888999998876      5999999999987


Q ss_pred             CC--eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccCCCCc
Q 015867          140 RN--HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       140 ~~--~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      ..  .+.+|.|.+ .|+|..|+++.+  .+....++.|++||+.||.|||++.  |+|||||.+||||+           
T Consensus       113 ~~n~~in~iTEL~TSGtLr~Y~kk~~--~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFin-----------  179 (632)
T KOG0584|consen  113 TDNKTINFITELFTSGTLREYRKKHR--RVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVN-----------  179 (632)
T ss_pred             CCCceeeeeeecccCCcHHHHHHHhc--cCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEc-----------
Confidence            54  589999999 999999999887  6999999999999999999999986  99999999999994           


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCCC-cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                  ...|.|||+|+|+|....... .+.+|||.|||||++. ..|+..+||||||+.|+||+|+..||...
T Consensus       180 ------------G~~G~VKIGDLGLAtl~r~s~aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC  246 (632)
T KOG0584|consen  180 ------------GNLGEVKIGDLGLATLLRKSHAKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSEC  246 (632)
T ss_pred             ------------CCcCceeecchhHHHHhhccccceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhh
Confidence                        457899999999998755443 4568999999999998 68999999999999999999999999987


Q ss_pred             CcHHHH-HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          294 ENLEHL-AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       294 ~~~~~~-~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..++ .++..  |..|..+-                                              .--.+++++||.
T Consensus       247 ~n~AQIYKKV~S--GiKP~sl~----------------------------------------------kV~dPevr~fIe  278 (632)
T KOG0584|consen  247 TNPAQIYKKVTS--GIKPAALS----------------------------------------------KVKDPEVREFIE  278 (632)
T ss_pred             CCHHHHHHHHHc--CCCHHHhh----------------------------------------------ccCCHHHHHHHH
Confidence            665544 33332  22232220                                              112467899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +||.. .++|+|+.|||.||||..
T Consensus       279 kCl~~-~~~R~sa~eLL~d~Ff~~  301 (632)
T KOG0584|consen  279 KCLAT-KSERLSAKELLKDPFFDE  301 (632)
T ss_pred             HHhcC-chhccCHHHHhhChhhcc
Confidence            99999 999999999999999976

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=100.00  E-value=4e-40  Score=308.82  Aligned_cols=251  Identities=27%  Similarity=0.387  Sum_probs=203.4

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .|...++||+|+||+||+|.+..+++.|++|.+.....    ....+..|+++++.+.      |+|++++++++.+...
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~   95 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLK------HPNTIEYKGCYLKEHT   95 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCC------CCCCccEEEEEEeCCE
Confidence            47788899999999999999999999999999864221    2234556777777664      5999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .|+||||+.++|.+++..... .+++..+..++.||+.||.|||++|++|+||||+||++.                   
T Consensus        96 ~~lv~e~~~~~l~~~l~~~~~-~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~-------------------  155 (313)
T cd06633          96 AWLVMEYCLGSASDLLEVHKK-PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT-------------------  155 (313)
T ss_pred             EEEEEecCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC-------------------
Confidence            999999998888888876443 589999999999999999999999999999999999993                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           .++.++|+|||++.... ......|+..|+|||++.   ...++.++|+|||||++|+|++|..||...+.....
T Consensus       156 -----~~~~~kL~dfg~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~  229 (313)
T cd06633         156 -----EPGQVKLADFGSASKSS-PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSAL  229 (313)
T ss_pred             -----CCCCEEEeecCCCcccC-CCCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHH
Confidence                 46679999999876433 234567899999999984   356889999999999999999999999877665555


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.....  +.                                              ...+.++..+.+||.+||+.+|
T Consensus       230 ~~~~~~~~--~~----------------------------------------------~~~~~~~~~l~~li~~~l~~~P  261 (313)
T cd06633         230 YHIAQNDS--PT----------------------------------------------LQSNEWTDSFRGFVDYCLQKIP  261 (313)
T ss_pred             HHHHhcCC--CC----------------------------------------------CCccccCHHHHHHHHHHccCCh
Confidence            44322110  00                                              0012345668899999999999


Q ss_pred             CCCCCHHHHhCCccccCC
Q 015867          380 SERLTARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~  397 (399)
                      .+||++.++++||||...
T Consensus       262 ~~Rp~~~~~l~~~~~~~~  279 (313)
T cd06633         262 QERPASAELLRHDFVRRD  279 (313)
T ss_pred             hhCcCHHHHhcCcccCCC
Confidence            999999999999999763

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.2e-40  Score=302.42  Aligned_cols=246  Identities=23%  Similarity=0.332  Sum_probs=201.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .++|++.+.||+|+||.||+|.+. +++.||+|.++........+..|+.+++.+.      |+|++++++++...+..+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~   77 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTMDPKDFLAEAQIMKKLR------HPKLIQLYAVCTLEEPIY   77 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcccHHHHHHHHHHHHHCC------CCCccceeEEEecCCCee
Confidence            357999999999999999999864 4578999998765444566778888888875      589999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++.......+++..+..++.|++.||.+||++||+|+||||+||+++                    
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~--------------------  137 (261)
T cd05068          78 IVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG--------------------  137 (261)
T ss_pred             eeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc--------------------
Confidence            999999 99999999876545689999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC-Ccccc---cCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN-HSSIV---STRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~---gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~  298 (399)
                          .++.++|+|||++...... .....   ++..|+|||++.+..++.++|+||||+++|+|++ |+.||.+.+....
T Consensus       138 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  213 (261)
T cd05068         138 ----ENNICKVADFGLARVIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEV  213 (261)
T ss_pred             ----CCCCEEECCcceEEEccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence                4667999999987654322 11122   2457999999999899999999999999999999 9999987766555


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+..... .                                                .....++..+.+++.+||+.|
T Consensus       214 ~~~~~~~~~-~------------------------------------------------~~~~~~~~~~~~li~~~l~~~  244 (261)
T cd05068         214 LQQVDQGYR-M------------------------------------------------PCPPGCPKELYDIMLDCWKED  244 (261)
T ss_pred             HHHHHcCCC-C------------------------------------------------CCCCcCCHHHHHHHHHHhhcC
Confidence            544432110 0                                                011245677899999999999


Q ss_pred             CCCCCCHHHHhC
Q 015867          379 PSERLTARQALN  390 (399)
Q Consensus       379 P~~R~t~~ell~  390 (399)
                      |.+||++.++++
T Consensus       245 P~~Rp~~~~l~~  256 (261)
T cd05068         245 PDDRPTFETLQW  256 (261)
T ss_pred             cccCCCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=100.00  E-value=2.7e-40  Score=306.55  Aligned_cols=255  Identities=26%  Similarity=0.460  Sum_probs=202.8

Q ss_pred             CEEEEeeeccccceEEEEEEEc---cCCeEEEEEEEecch-----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           67 RYKILSKMGEGTFGRVLECWDR---QTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      .|++.+.||+|+||.||+|++.   .+|+.||+|+++...     ........|+++++.+.     +|++|+.+++.++
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~~i~~~~~~~~   75 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-----QSPFLVTLHYAFQ   75 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcc-----cCCChhceeeEee
Confidence            4899999999999999999874   478899999987532     12344566888888775     3689999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      .+...|+||||+ +++|.+++....  .+++..+..++.|++.||.|||+.|++||||||+|||+               
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~---------------  138 (290)
T cd05613          76 TDTKLHLILDYINGGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILL---------------  138 (290)
T ss_pred             cCCeEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEE---------------
Confidence            999999999999 899999998765  58999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                               +.++.++|+|||++......    .....|+..|+|||.+.+.  .++.++|+||||+++|+|++|..||.
T Consensus       139 ---------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~  209 (290)
T cd05613         139 ---------DSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFT  209 (290)
T ss_pred             ---------CCCCCEEEeeCccceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCC
Confidence                     34677999999987653221    2345689999999998753  57889999999999999999999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..........+.....                                              ......++.++..+.+|+
T Consensus       210 ~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~~ll  243 (290)
T cd05613         210 VDGEKNSQAEISRRIL----------------------------------------------KSEPPYPQEMSALAKDII  243 (290)
T ss_pred             cCCccccHHHHHHHhh----------------------------------------------ccCCCCCccCCHHHHHHH
Confidence            5333222222211100                                              000011234567789999


Q ss_pred             HHccccCCCCCC-----CHHHHhCCccccCCC
Q 015867          372 HGLLRYDPSERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~R~-----t~~ell~hp~f~~~~  398 (399)
                      .+||+.||.+|+     ++.+++.||||+.++
T Consensus       244 ~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         244 QRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             HHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence            999999999997     899999999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=100.00  E-value=2e-40  Score=307.81  Aligned_cols=250  Identities=26%  Similarity=0.452  Sum_probs=203.0

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      |....+||+|+||.||++....+++.||||.+.... .....+..|+.+++.+.      |+|++++++.+...+..++|
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~lv   95 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HENVVEMYNSYLVGDELWVV   95 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcC------CcchhheeeEEEeCCEEEEE
Confidence            444578999999999999999999999999875322 23445666777777764      58999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|.+++...   .+++..+..++.|++.||+|||+.|++|+||||+||++                       
T Consensus        96 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv-----------------------  149 (292)
T cd06657          96 MEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILL-----------------------  149 (292)
T ss_pred             EecCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE-----------------------
Confidence            9999 88999987654   48999999999999999999999999999999999999                       


Q ss_pred             CCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM  302 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i  302 (399)
                       +.++.++|+|||++.....   ......|+..|+|||.+.+..++.++|+||+|+++|+|++|..||.+....+....+
T Consensus       150 -~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~  228 (292)
T cd06657         150 -THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMI  228 (292)
T ss_pred             -CCCCCEEEcccccceecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence             3466799999998754322   223456899999999998888999999999999999999999999876655544433


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      ......   .                    +                        .....++..+.++|.+||..||.+|
T Consensus       229 ~~~~~~---~--------------------~------------------------~~~~~~~~~l~~li~~~l~~~P~~R  261 (292)
T cd06657         229 RDNLPP---K--------------------L------------------------KNLHKVSPSLKGFLDRLLVRDPAQR  261 (292)
T ss_pred             HhhCCc---c--------------------c------------------------CCcccCCHHHHHHHHHHHhCCcccC
Confidence            221100   0                    0                        0112456778899999999999999


Q ss_pred             CCHHHHhCCccccCC
Q 015867          383 LTARQALNHPFFRNL  397 (399)
Q Consensus       383 ~t~~ell~hp~f~~~  397 (399)
                      |++.++++||||...
T Consensus       262 ~~~~~ll~~~~~~~~  276 (292)
T cd06657         262 ATAAELLKHPFLAKA  276 (292)
T ss_pred             cCHHHHhcChHHhcc
Confidence            999999999999864

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=100.00  E-value=1.9e-40  Score=302.67  Aligned_cols=248  Identities=26%  Similarity=0.383  Sum_probs=199.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .++|++.++||+|+||.||+|.+. ++..+|+|.+.........+..|+.+++.+.      |++++++++++. .+..+
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~------~~~i~~~~~~~~-~~~~~   76 (260)
T cd05070           5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMSPESFLEEAQIMKKLR------HDKLVQLYAVVS-EEPIY   76 (260)
T ss_pred             hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCCHHHHHHHHHHHHhcC------CCceEEEEeEEC-CCCcE
Confidence            457999999999999999999765 5566999999765444566778888888875      489999998875 45689


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++.......+++..+..++.|++.||.|||+.||+|+||||+||+++                    
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~--------------------  136 (260)
T cd05070          77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG--------------------  136 (260)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe--------------------
Confidence            999999 89999999876555689999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~  298 (399)
                          .++.++|+|||.+.......    ....++..|+|||++.+..++.++|+||||+++|+|++ |.+||.+.+..+.
T Consensus       137 ----~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~  212 (260)
T cd05070         137 ----DGLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREV  212 (260)
T ss_pred             ----CCceEEeCCceeeeeccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHH
Confidence                45679999999886533221    12235668999999998899999999999999999999 9999987766555


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+..... +                                                ..+...+..+.+|+.+||..|
T Consensus       213 ~~~~~~~~~-~------------------------------------------------~~~~~~~~~~~~li~~~l~~~  243 (260)
T cd05070         213 LEQVERGYR-M------------------------------------------------PCPQDCPISLHELMLQCWKKD  243 (260)
T ss_pred             HHHHHcCCC-C------------------------------------------------CCCCcCCHHHHHHHHHHcccC
Confidence            544422100 0                                                011245677899999999999


Q ss_pred             CCCCCCHHHHhCCcccc
Q 015867          379 PSERLTARQALNHPFFR  395 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~  395 (399)
                      |.+|||+.++++  |++
T Consensus       244 p~~Rpt~~~l~~--~l~  258 (260)
T cd05070         244 PEERPTFEYLQS--FLE  258 (260)
T ss_pred             cccCcCHHHHHH--HHh
Confidence            999999999864  544

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=100.00  E-value=3.1e-40  Score=304.11  Aligned_cols=249  Identities=20%  Similarity=0.326  Sum_probs=196.4

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      ..++|++.+.||+|+||.||+|.+.     .++..||||++....  .....+..|+.+++.+.      |+||++++++
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~------~~~iv~~~~~   77 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFN------CHHVVRLLGV   77 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCeeeEEEE
Confidence            4567999999999999999998764     245779999885432  23344666777777664      5999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCC--------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccc
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKY--------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEF  207 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~  207 (399)
                      +......++||||+ +++|.+++.+...        ..++...+..++.|++.||.|||+.|++|+||||+||+++    
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~----  153 (277)
T cd05062          78 VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA----  153 (277)
T ss_pred             EcCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc----
Confidence            99999999999999 8999999976331        2357788899999999999999999999999999999994    


Q ss_pred             ccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHH
Q 015867          208 IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE  282 (399)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  282 (399)
                                          .++.++|+|||++.......     ....++..|+|||++.+..++.++|+|||||++|+
T Consensus       154 --------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~e  213 (277)
T cd05062         154 --------------------EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWE  213 (277)
T ss_pred             --------------------CCCCEEECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHH
Confidence                                46679999999876432211     12345778999999999899999999999999999


Q ss_pred             HHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccch
Q 015867          283 LCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD  361 (399)
Q Consensus       283 ll~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (399)
                      |++ |..||.+.+..+....+......                                                 ..+.
T Consensus       214 l~~~~~~p~~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~  244 (277)
T cd05062         214 IATLAEQPYQGMSNEQVLRFVMEGGLL-------------------------------------------------DKPD  244 (277)
T ss_pred             HHcCCCCCCCCCCHHHHHHHHHcCCcC-------------------------------------------------CCCC
Confidence            999 78999876655444333221100                                                 0112


Q ss_pred             hhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          362 RARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       362 ~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      .++..+.+||.+||+.||.+|||+.|++++
T Consensus       245 ~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         245 NCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            456678999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=100.00  E-value=2.4e-40  Score=337.36  Aligned_cols=247  Identities=24%  Similarity=0.341  Sum_probs=195.2

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.++||+|+||.||+|++..+++.||||+++..    ......+..|++++..+.      ||||+++++++.+.+
T Consensus         2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~------HPNIVkl~~v~~d~~   75 (932)
T PRK13184          2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLI------HPGIVPVYSICSDGD   75 (932)
T ss_pred             CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCC------CcCcCeEEEEEeeCC
Confidence            5799999999999999999999999999999998642    223455777888888775      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNK---------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~---------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~  211 (399)
                      ..|+||||+ |++|.+++.+..         ...++...+..++.||+.||+|||++||+||||||+|||++        
T Consensus        76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd--------  147 (932)
T PRK13184         76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG--------  147 (932)
T ss_pred             EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc--------
Confidence            999999999 999999987521         12355677889999999999999999999999999999994        


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCC---------------------CCcccccCCCccchhhhhCCCCCCc
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ---------------------NHSSIVSTRHYRAPEVILGLGWSYP  270 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---------------------~~~~~~gt~~y~aPE~~~~~~~~~~  270 (399)
                                      .++.++|+|||++.....                     .....+||+.|+|||++.+..++.+
T Consensus       148 ----------------~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~k  211 (932)
T PRK13184        148 ----------------LFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASES  211 (932)
T ss_pred             ----------------CCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcH
Confidence                            466799999998765310                     0123579999999999999999999


Q ss_pred             chhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhh
Q 015867          271 CDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD  350 (399)
Q Consensus       271 ~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  350 (399)
                      +|||||||++|+|++|..||...+.......   .....|..+                                     
T Consensus       212 SDIWSLGVILyELLTG~~PF~~~~~~ki~~~---~~i~~P~~~-------------------------------------  251 (932)
T PRK13184        212 TDIYALGVILYQMLTLSFPYRRKKGRKISYR---DVILSPIEV-------------------------------------  251 (932)
T ss_pred             hHHHHHHHHHHHHHHCCCCCCCcchhhhhhh---hhccChhhc-------------------------------------
Confidence            9999999999999999999976443222111   000000000                                     


Q ss_pred             hhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHh
Q 015867          351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL  389 (399)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell  389 (399)
                             .....++..+.+++.+||+.||.+|++..+.+
T Consensus       252 -------~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeL  283 (932)
T PRK13184        252 -------APYREIPPFLSQIAMKALAVDPAERYSSVQEL  283 (932)
T ss_pred             -------cccccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence                   01124567789999999999999998765544

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=100.00  E-value=7.9e-41  Score=305.17  Aligned_cols=245  Identities=23%  Similarity=0.343  Sum_probs=202.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .+|++.+.||.|+||.||+|.+.. ++.+|+|++..... ....+..|+.+++.+.      |+|++++++++...+..+
T Consensus         6 ~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~   78 (261)
T cd05148           6 EEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLR------HKHLISLFAVCSVGEPVY   78 (261)
T ss_pred             HHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCC------CcchhheeeeEecCCCeE
Confidence            469999999999999999999877 88899999875433 3455677777777774      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++.+.....+++..+..++.||+.||.|||+.||+|+||||+||+++                    
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~--------------------  138 (261)
T cd05148          79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG--------------------  138 (261)
T ss_pred             EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc--------------------
Confidence            999999 88999999876655789999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                          .++.++|+|||.+......   .....++..|+|||++.+..++.++|+||||+++|+|++ |..||...+..+..
T Consensus       139 ----~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~  214 (261)
T cd05148         139 ----EDLVCKVADFGLARLIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVY  214 (261)
T ss_pred             ----CCceEEEccccchhhcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence                4667999999987654322   123345678999999998899999999999999999998 89999877765555


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......                                                 ..+..++..+.++|.+||+.||
T Consensus       215 ~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~i~~~l~~~p  245 (261)
T cd05148         215 DQITAGYRM-------------------------------------------------PCPAKCPQEIYKIMLECWAAEP  245 (261)
T ss_pred             HHHHhCCcC-------------------------------------------------CCCCCCCHHHHHHHHHHcCCCc
Confidence            544321100                                                 0113456778999999999999


Q ss_pred             CCCCCHHHHhC
Q 015867          380 SERLTARQALN  390 (399)
Q Consensus       380 ~~R~t~~ell~  390 (399)
                      .+|||+.++++
T Consensus       246 ~~Rpt~~~l~~  256 (261)
T cd05148         246 EDRPSFKALRE  256 (261)
T ss_pred             hhCcCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=100.00  E-value=2.6e-40  Score=307.88  Aligned_cols=248  Identities=20%  Similarity=0.294  Sum_probs=196.8

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCe--EEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQE--RVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~--~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|.+..++.  .+++|.++..  ......+..|++++..+.     .||||+++++++...+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~~~~~~~~~~   76 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLG-----HHPNIINLLGACENRG   76 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhc-----CCCchhheEEEEccCC
Confidence            469999999999999999998876654  4688887632  223345677888887774     3699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKY--------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                      ..++||||+ +++|.+++.....              ..+++..+..++.||+.||+|||+.||+||||||+|||++   
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~---  153 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG---  153 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC---
Confidence            999999999 8999999976421              2488899999999999999999999999999999999993   


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcc--cccCCCccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSS--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~--~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  284 (399)
                                           .+..+||+|||++.........  ...+..|+|||++.+..++.++|||||||++|+|+
T Consensus       154 ---------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~  212 (297)
T cd05089         154 ---------------------ENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIV  212 (297)
T ss_pred             ---------------------CCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHH
Confidence                                 4667999999987643222111  22355799999999989999999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhh
Q 015867          285 T-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA  363 (399)
Q Consensus       285 ~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (399)
                      + |..||......+....+.....                                                 ...+..+
T Consensus       213 t~g~~pf~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~  243 (297)
T cd05089         213 SLGGTPYCGMTCAELYEKLPQGYR-------------------------------------------------MEKPRNC  243 (297)
T ss_pred             cCCCCCCCCCCHHHHHHHHhcCCC-------------------------------------------------CCCCCCC
Confidence            7 9999987666554443321100                                                 0111346


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          364 RSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       364 ~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      +..+.+||.+||+.||.+|||++++++.
T Consensus       244 ~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         244 DDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            7788999999999999999999998654

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=100.00  E-value=3.3e-40  Score=337.20  Aligned_cols=142  Identities=24%  Similarity=0.392  Sum_probs=124.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|.++++||.|+||.||+|++..+++.||||+++...    .....+..|+.++..+.      |+||++++..+...+
T Consensus         4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~------hp~Iv~~~~~~~~~~   77 (669)
T cd05610           4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSK------SPFIVHLYYSLQSAN   77 (669)
T ss_pred             CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcC------CCCcCeEEEEEEECC
Confidence            57999999999999999999999999999999997532    12245566777776664      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      .+|+||||+ |++|.+++...+  .+++..++.|+.||+.||.|||++|||||||||+||||+.++.+++.||+.
T Consensus        78 ~~~lVmEy~~g~~L~~li~~~~--~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGl  150 (669)
T cd05610          78 NVYLVMEYLIGGDVKSLLHIYG--YFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGL  150 (669)
T ss_pred             EEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCC
Confidence            999999999 999999998765  589999999999999999999999999999999999999999888887754

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-41  Score=298.61  Aligned_cols=252  Identities=24%  Similarity=0.447  Sum_probs=209.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhh----hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY----RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|.+++.||+|+|+.|.+++..++.+.||+|++++.--.    -+..+.|..+.....     ++|.+|-++..|+.+.
T Consensus       250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~as-----n~pflvglhscfqtes  324 (593)
T KOG0695|consen  250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NNPFLVGLHSCFQTES  324 (593)
T ss_pred             ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhcc-----CCCeEEehhhhhcccc
Confidence            5799999999999999999999999999999999763222    233455666665544     5799999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+++|.||+ ||+|.-.+++..  ++++..++.+..+|+.||.|||+.||++||||.+|||+                  
T Consensus       325 rlffvieyv~ggdlmfhmqrqr--klpeeharfys~ei~lal~flh~rgiiyrdlkldnvll------------------  384 (593)
T KOG0695|consen  325 RLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLL------------------  384 (593)
T ss_pred             eEEEEEEEecCcceeeehhhhh--cCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEE------------------
Confidence            999999999 999988887766  69999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCccc---CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC-----
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAF---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT-----  292 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-----  292 (399)
                            +..+++||+|+|+++.   .+..++++||||.|.|||++.+..|+..+|+|+|||+++||+.|+.||+-     
T Consensus       385 ------daeghikltdygmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n  458 (593)
T KOG0695|consen  385 ------DAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDN  458 (593)
T ss_pred             ------ccCCceeecccchhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCC
Confidence                  5678899999999865   44556889999999999999999999999999999999999999999962     


Q ss_pred             --CCcHHHHHH-HHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          293 --HENLEHLAM-MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       293 --~~~~~~~~~-i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                        .+..+.+-+ |.+....+                                                  +...|-.+..
T Consensus       459 ~d~ntedylfqvilekqiri--------------------------------------------------prslsvkas~  488 (593)
T KOG0695|consen  459 PDMNTEDYLFQVILEKQIRI--------------------------------------------------PRSLSVKASH  488 (593)
T ss_pred             cccchhHHHHHHHhhhcccc--------------------------------------------------cceeehhhHH
Confidence              122233222 22222222                                                  2334555678


Q ss_pred             HHHHccccCCCCCCC------HHHHhCCccccCCC
Q 015867          370 LLHGLLRYDPSERLT------ARQALNHPFFRNLN  398 (399)
Q Consensus       370 li~~~L~~dP~~R~t------~~ell~hp~f~~~~  398 (399)
                      +++.-|..||.+|+.      ..++..|+||..++
T Consensus       489 vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~id  523 (593)
T KOG0695|consen  489 VLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSID  523 (593)
T ss_pred             HHHHhhcCCcHHhcCCCcccchhhhhcchhhhhCC
Confidence            999999999999984      78999999999764

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=100.00  E-value=2.4e-40  Score=301.38  Aligned_cols=245  Identities=22%  Similarity=0.332  Sum_probs=199.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      .+|++.+.||+|+||.||++.+. ++..+|+|++.........+..|+++++.+.      |+||+++++++...+..++
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~l   76 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMSEDDFIEEAKVMMKLS------HPNLVQLYGVCTKQRPIFI   76 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCCHHHHHHHHHHHHhCC------CCCEEEEEEEEcCCCceEE
Confidence            35899999999999999999875 4667999998754444456777888888765      5999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++..... .+++..+..++.||+.||.|||+.|++|+||||+||+++                     
T Consensus        77 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---------------------  134 (256)
T cd05059          77 VTEYMANGCLLNYLRERKG-KLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---------------------  134 (256)
T ss_pred             EEecCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---------------------
Confidence            99999 9999999986543 689999999999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC-c---ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH-S---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~-~---~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                         .++.++|+|||.+....... .   ...++..|+|||.+.+..++.++|+||||+++|+|++ |..||...+..+..
T Consensus       135 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~  211 (256)
T cd05059         135 ---EDNVVKVSDFGLARYVLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVV  211 (256)
T ss_pred             ---CCCcEEECCcccceecccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHH
Confidence               46679999999876533221 1   1123457999999999999999999999999999999 89999876665544


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.....                                                 ...+..++.++.+++.+||..||
T Consensus       212 ~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~li~~cl~~~p  242 (256)
T cd05059         212 ESVSAGYR-------------------------------------------------LYRPKLAPTEVYTIMYSCWHEKP  242 (256)
T ss_pred             HHHHcCCc-------------------------------------------------CCCCCCCCHHHHHHHHHHhcCCh
Confidence            44322110                                                 01113457788999999999999


Q ss_pred             CCCCCHHHHhCC
Q 015867          380 SERLTARQALNH  391 (399)
Q Consensus       380 ~~R~t~~ell~h  391 (399)
                      .+|||+.|+++.
T Consensus       243 ~~Rpt~~~~l~~  254 (256)
T cd05059         243 EDRPAFKKLLSQ  254 (256)
T ss_pred             hhCcCHHHHHHH
Confidence            999999999863

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=100.00  E-value=3.2e-40  Score=305.03  Aligned_cols=247  Identities=20%  Similarity=0.306  Sum_probs=197.1

Q ss_pred             CCEEEEeeeccccceEEEEEEE----ccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWD----RQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~----~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+|++.+.||+|+||.||+|.+    ..+++.||+|.+.....  ....+..|+++++.+.      |+||+++++++..
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~   78 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELH------HPNIVCLLGVVTQ   78 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCC------CCCeeeEEEEEec
Confidence            4699999999999999999985    34567899999864222  2245667888888775      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNK---------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLV  203 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~---------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~  203 (399)
                      .+..|+||||+ +++|.+++....               ...+++..+..++.||+.||.|||++||+|+||||+|||++
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~  158 (283)
T cd05090          79 EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG  158 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc
Confidence            99999999999 899999986432               12478889999999999999999999999999999999994


Q ss_pred             ecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHH
Q 015867          204 SSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGC  278 (399)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~  278 (399)
                                              .++.++|+|||++......     .....++..|+|||++.+..++.++|+||||+
T Consensus       159 ------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~  214 (283)
T cd05090         159 ------------------------EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGV  214 (283)
T ss_pred             ------------------------CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHH
Confidence                                    4567999999988653221     23344677899999999888999999999999


Q ss_pred             HHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhh
Q 015867          279 ILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS  357 (399)
Q Consensus       279 il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      ++|+|++ |..||.+....+....+..... +                                                
T Consensus       215 il~el~~~g~~p~~~~~~~~~~~~~~~~~~-~------------------------------------------------  245 (283)
T cd05090         215 VLWEIFSFGLQPYYGFSNQEVIEMVRKRQL-L------------------------------------------------  245 (283)
T ss_pred             HHHHHHcCCCCCCCCCCHHHHHHHHHcCCc-C------------------------------------------------
Confidence            9999998 9999987665444443322110 0                                                


Q ss_pred             ccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       358 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      ..+..++..+.++|.+||+.||.+||++.+++++
T Consensus       246 ~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         246 PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            0112456778999999999999999999999764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=6.1e-40  Score=299.30  Aligned_cols=246  Identities=26%  Similarity=0.338  Sum_probs=202.4

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .++|++.+.||+|+||.||+|.+. +++.||||.+.........+..|+.+++.+.      |+|++++++++......+
T Consensus         5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~   77 (261)
T cd05034           5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMSPEAFLQEAQIMKKLR------HDKLVQLYAVCSEEEPIY   77 (261)
T ss_pred             hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccCHHHHHHHHHHHhhCC------CCCEeeeeeeeecCCceE
Confidence            457999999999999999999875 4577999998765555566778888888875      589999999999889999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++.......+++..+..++.||+.||.|||++|++|+||||+||+++                    
T Consensus        78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~--------------------  137 (261)
T cd05034          78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG--------------------  137 (261)
T ss_pred             EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc--------------------
Confidence            999999 89999999876655799999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~  298 (399)
                          .++.++|+|||.+.......    ....++..|+|||.+.+..++.++|+||||+++|++++ |+.||.+.+....
T Consensus       138 ----~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~  213 (261)
T cd05034         138 ----ENLVCKIADFGLARLIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREV  213 (261)
T ss_pred             ----CCCCEEECccccceeccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence                46779999999876543211    12234568999999999899999999999999999998 9999987766555


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+......                                                 ..+...+.++.+++.+||..|
T Consensus       214 ~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~i~~~l~~~  244 (261)
T cd05034         214 LEQVERGYRM-------------------------------------------------PRPPNCPEELYDLMLQCWDKD  244 (261)
T ss_pred             HHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHcccC
Confidence            5544321100                                                 011234667899999999999


Q ss_pred             CCCCCCHHHHhC
Q 015867          379 PSERLTARQALN  390 (399)
Q Consensus       379 P~~R~t~~ell~  390 (399)
                      |.+||+++++++
T Consensus       245 p~~Rp~~~~l~~  256 (261)
T cd05034         245 PEERPTFEYLQS  256 (261)
T ss_pred             cccCCCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=100.00  E-value=2.8e-40  Score=318.65  Aligned_cols=249  Identities=20%  Similarity=0.273  Sum_probs=195.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEcc-----CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQ-----TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|++.+.||+|+||.||+|.+..     ++..||||+++...  .....+..|++++..+.     .||||+++++++
T Consensus        36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~-----~HpnIv~l~~~~  110 (400)
T cd05105          36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLG-----PHLNIVNLLGAC  110 (400)
T ss_pred             ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcC-----CCCCeeeEEEEE
Confidence            3468999999999999999998643     24579999986432  23455777888888774     369999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC------------------------------------------------------
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNK------------------------------------------------------  162 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~------------------------------------------------------  162 (399)
                      ...+..||||||| +|+|.+++....                                                      
T Consensus       111 ~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  190 (400)
T cd05105         111 TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVP  190 (400)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccch
Confidence            9999999999999 999999886532                                                      


Q ss_pred             ----------------------------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE
Q 015867          163 ----------------------------------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL  202 (399)
Q Consensus       163 ----------------------------------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll  202 (399)
                                                              ...+++..+..++.||+.||.|||+.||+|+||||+|||+
T Consensus       191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill  270 (400)
T cd05105         191 MLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLL  270 (400)
T ss_pred             hhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEE
Confidence                                                    1247778889999999999999999999999999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHH
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVG  277 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  277 (399)
                      +                        .+..++|+|||++......     .....++..|+|||++.+..++.++||||||
T Consensus       271 ~------------------------~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlG  326 (400)
T cd05105         271 A------------------------QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYG  326 (400)
T ss_pred             e------------------------CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHH
Confidence            4                        4567999999988653221     2234567889999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhh
Q 015867          278 CILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV  356 (399)
Q Consensus       278 ~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  356 (399)
                      |++|+|++ |..||..................                                                
T Consensus       327 vil~ellt~g~~P~~~~~~~~~~~~~~~~~~~------------------------------------------------  358 (400)
T cd05105         327 ILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYR------------------------------------------------  358 (400)
T ss_pred             HHHHHHHHCCCCCCcccchhHHHHHHHhcCCC------------------------------------------------
Confidence            99999997 99999765433322221111000                                                


Q ss_pred             hccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       357 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ...+..++.++.++|.+||+.||.+|||+.++.+
T Consensus       359 ~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~  392 (400)
T cd05105         359 MAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSD  392 (400)
T ss_pred             CCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHH
Confidence            0011345678899999999999999999998865

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=100.00  E-value=1.6e-40  Score=303.16  Aligned_cols=248  Identities=29%  Similarity=0.462  Sum_probs=198.6

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +|.+.+.||+|+||.||++.+..++..+++|+++...      ........|..+++.+.      |||++++++++.+.
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~   74 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD------HPAIVKFHASFLER   74 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCC------CCcHHHHHHHHhcC
Confidence            5999999999999999999988877778788775422      12223445666666654      69999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      ...++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.|++|+||||+||++.              
T Consensus        75 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~--------------  140 (260)
T cd08222          75 DAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK--------------  140 (260)
T ss_pred             CceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee--------------
Confidence            9999999999 88999988642  223689999999999999999999999999999999999983              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                                 ++.++|+|||.+.....   ......|+..|+|||.+.+..++.++|+||||+++|+|++|..||....
T Consensus       141 -----------~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~  209 (260)
T cd08222         141 -----------NNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN  209 (260)
T ss_pred             -----------cCCEeecccCceeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc
Confidence                       23599999998765322   2234568899999999988889999999999999999999999997665


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      .......+...  ..+                                               ..+..++.++.++|.+|
T Consensus       210 ~~~~~~~~~~~--~~~-----------------------------------------------~~~~~~~~~~~~li~~~  240 (260)
T cd08222         210 FLSVVLRIVEG--PTP-----------------------------------------------SLPETYSRQLNSIMQSM  240 (260)
T ss_pred             HHHHHHHHHcC--CCC-----------------------------------------------CCcchhcHHHHHHHHHH
Confidence            54443333211  100                                               01134567889999999


Q ss_pred             cccCCCCCCCHHHHhCCccc
Q 015867          375 LRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f  394 (399)
                      |..||.+||++.++++||||
T Consensus       241 l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         241 LNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             hcCChhhCcCHHHHhhCCCC
Confidence            99999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=100.00  E-value=4.2e-40  Score=299.67  Aligned_cols=243  Identities=23%  Similarity=0.345  Sum_probs=198.2

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee-ccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF-DYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~-~~~~~~~  144 (399)
                      ++|++.+.||+|+||.||++...  +..||+|.++.. .....+..|+.+++.+.      |++++++++++ ...+..+
T Consensus         6 ~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~-~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~   76 (256)
T cd05082           6 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKND-ATAQAFLAEASVMTQLR------HSNLVQLLGVIVEEKGGLY   76 (256)
T ss_pred             HhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCC-chHHHHHHHHHHHHhCC------CCCeeeEEEEEEcCCCceE
Confidence            36999999999999999999654  677999998643 23456777888888875      58999999865 4567899


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +++|.+++.......+++..+..++.|++.||+|||++|++||||||+||+++                    
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~--------------------  136 (256)
T cd05082          77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS--------------------  136 (256)
T ss_pred             EEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc--------------------
Confidence            999999 88999999876655689999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM  302 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i  302 (399)
                          .++.++|+|||++...........++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+....+
T Consensus       137 ----~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~  212 (256)
T cd05082         137 ----EDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV  212 (256)
T ss_pred             ----CCCcEEecCCccceeccccCCCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence                4667999999988765444445556778999999998899999999999999999998 99999876554444333


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      .....                                                 ....+.++..+.++|.+||+.||.+|
T Consensus       213 ~~~~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R  243 (256)
T cd05082         213 EKGYK-------------------------------------------------MDAPDGCPPVVYDVMKQCWHLDAATR  243 (256)
T ss_pred             hcCCC-------------------------------------------------CCCCCCCCHHHHHHHHHHhcCChhhC
Confidence            22100                                                 01113456788999999999999999


Q ss_pred             CCHHHHhC
Q 015867          383 LTARQALN  390 (399)
Q Consensus       383 ~t~~ell~  390 (399)
                      ||+.++++
T Consensus       244 pt~~~l~~  251 (256)
T cd05082         244 PSFLQLRE  251 (256)
T ss_pred             cCHHHHHH
Confidence            99999975

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=5.2e-40  Score=298.97  Aligned_cols=244  Identities=23%  Similarity=0.329  Sum_probs=201.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.+.||.|+||.||+|...  |+.||+|.+.........+..|+.+++.+.      |+|++++++++.+.+..++
T Consensus         6 ~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~   77 (256)
T cd05039           6 KELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDSTAAQAFLAEASVMTTLR------HPNLVQLLGVVLQGNPLYI   77 (256)
T ss_pred             hhccceeeeecCCCceEEEEEec--CcEEEEEEeccchhHHHHHHHHHHHHHhcC------CcceeeeEEEEcCCCCeEE
Confidence            46999999999999999999764  788999999765444566777888888875      4899999999998999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++                     
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---------------------  136 (256)
T cd05039          78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---------------------  136 (256)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---------------------
Confidence            99999 88999999876655699999999999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME  303 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~  303 (399)
                         .++.++|+|||.+...........++..|+|||++....++.++|+||||+++|++++ |..||...+..+....+.
T Consensus       137 ---~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~  213 (256)
T cd05039         137 ---EDLVAKVSDFGLAKEASQGQDSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVE  213 (256)
T ss_pred             ---CCCCEEEcccccccccccccccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHh
Confidence               4667999999988765444334445678999999988889999999999999999997 999998765544333222


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      ....                                                 ...+..++.++.++|.+||..||.+||
T Consensus       214 ~~~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp  244 (256)
T cd05039         214 KGYR-------------------------------------------------MEAPEGCPPEVYKVMKDCWELDPAKRP  244 (256)
T ss_pred             cCCC-------------------------------------------------CCCccCCCHHHHHHHHHHhccChhhCc
Confidence            1100                                                 011134567889999999999999999


Q ss_pred             CHHHHhC
Q 015867          384 TARQALN  390 (399)
Q Consensus       384 t~~ell~  390 (399)
                      |+.++++
T Consensus       245 ~~~~l~~  251 (256)
T cd05039         245 TFKQLRE  251 (256)
T ss_pred             CHHHHHH
Confidence            9999976

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=100.00  E-value=5.9e-40  Score=299.44  Aligned_cols=244  Identities=27%  Similarity=0.371  Sum_probs=197.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.+.||+|+||.||+|.+..++ .+|+|.+.........+..|+++++.+.      |++++++++++. .+..++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~-~~~~~~   77 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGTMMPEAFLQEAQIMKKLR------HDKLVPLYAVVS-EEPIYI   77 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCCccHHHHHHHHHHHHhCC------CCCeeeEEEEEc-CCCcEE
Confidence            57999999999999999999876554 5999988765444566777888888875      589999988775 456899


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++                     
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---------------------  136 (260)
T cd05069          78 VTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---------------------  136 (260)
T ss_pred             EEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---------------------
Confidence            99999 88999999876544689999999999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                         .++.++|+|||.+.......    ....++..|+|||.+.+..++.++|+||||+++|+|++ |..||.+....+..
T Consensus       137 ---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~  213 (260)
T cd05069         137 ---DNLVCKIADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVL  213 (260)
T ss_pred             ---CCCeEEECCCccceEccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence               46679999999886543221    12345678999999998899999999999999999999 99999876665544


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+..... .                                                ..+...+..+.+|+.+||+.||
T Consensus       214 ~~~~~~~~-~------------------------------------------------~~~~~~~~~~~~li~~~l~~~p  244 (260)
T cd05069         214 EQVERGYR-M------------------------------------------------PCPQGCPESLHELMKLCWKKDP  244 (260)
T ss_pred             HHHHcCCC-C------------------------------------------------CCCcccCHHHHHHHHHHccCCc
Confidence            43322100 0                                                0112346778999999999999


Q ss_pred             CCCCCHHHHhC
Q 015867          380 SERLTARQALN  390 (399)
Q Consensus       380 ~~R~t~~ell~  390 (399)
                      .+||+++++++
T Consensus       245 ~~Rp~~~~i~~  255 (260)
T cd05069         245 DERPTFEYIQS  255 (260)
T ss_pred             ccCcCHHHHHH
Confidence            99999999875

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=100.00  E-value=6.1e-40  Score=303.90  Aligned_cols=255  Identities=26%  Similarity=0.422  Sum_probs=200.4

Q ss_pred             CEEEEeeeccccceEEEEEEEc---cCCeEEEEEEEecch-----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           67 RYKILSKMGEGTFGRVLECWDR---QTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      +|++.+.||+|+||.||++++.   .+++.||||+++...     .....+..|++++..+.     +|++++.+++.+.
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~~~~i~~~~~~~~   75 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVR-----RCPFLVTLHYAFQ   75 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhcc-----CCcchhhhheeee
Confidence            4899999999999999999853   467889999987432     12344567888888775     3689999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      .....++||||+ +++|.+++....  .+++..++.++.|++.+|.|||+.|++|+||||+||+++              
T Consensus        76 ~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~--------------  139 (288)
T cd05583          76 TDTKLHLILDYVNGGELFTHLYQRE--HFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD--------------  139 (288)
T ss_pred             cCCEEEEEEecCCCCcHHHHHhhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC--------------
Confidence            999999999999 889999987654  589999999999999999999999999999999999993              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCC--CCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLG--WSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                .++.++|+|||++......    .....|+..|+|||.+.+..  .+.++|+||||+++|+|++|..||.
T Consensus       140 ----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~  209 (288)
T cd05583         140 ----------SEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFT  209 (288)
T ss_pred             ----------CCCCEEEEECccccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcc
Confidence                      4667999999987653222    22356899999999987664  7889999999999999999999996


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+.......+.+...                                              ......+..++..+.+||
T Consensus       210 ~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~l~~li  243 (288)
T cd05583         210 VDGEQNSQSEISRRIL----------------------------------------------KSKPPFPKTMSAEARDFI  243 (288)
T ss_pred             cCcccchHHHHHHHHH----------------------------------------------ccCCCCCcccCHHHHHHH
Confidence            4332211111111000                                              000011234567789999


Q ss_pred             HHccccCCCCCCC---HHHHhCCccccCCC
Q 015867          372 HGLLRYDPSERLT---ARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~R~t---~~ell~hp~f~~~~  398 (399)
                      .+||+.||++|||   +.++|+||||++++
T Consensus       244 ~~~l~~~p~~R~t~~~~~~~l~~~~~~~~~  273 (288)
T cd05583         244 QKLLEKDPKKRLGANGADEIKNHPFFQGID  273 (288)
T ss_pred             HHHhcCCHhhccCcchHHHHhcCcccccCC
Confidence            9999999999998   56789999999864

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=100.00  E-value=3.3e-40  Score=299.58  Aligned_cols=239  Identities=21%  Similarity=0.340  Sum_probs=191.0

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      +.||+|+||.||+|.+..+++.||+|.+...  ......+..|+++++.+.      |+||+++++++...+..++||||
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~   74 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYS------HPNIVRLIGVCTQKQPIYIVMEL   74 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEcCCCCeEEEEee
Confidence            4699999999999999989999999987542  223455777888887764      59999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      + +++|.+++...+. .+++..+..++.|++.||.|||++||+|+||||+|||++                        .
T Consensus        75 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~------------------------~  129 (252)
T cd05084          75 VQGGDFLTFLRTEGP-RLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT------------------------E  129 (252)
T ss_pred             ccCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc------------------------C
Confidence            9 8999999976542 589999999999999999999999999999999999994                        4


Q ss_pred             CCceEEeecCCcccCCCCCc-----ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 015867          229 SSAIKLIDFGSTAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM  302 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i  302 (399)
                      ++.++|+|||.+........     ...++..|+|||.+.+..++.++|+||||+++|+|++ |..||......+....+
T Consensus       130 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~  209 (252)
T cd05084         130 KNVLKISDFGMSREEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAI  209 (252)
T ss_pred             CCcEEECccccCcccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHH
Confidence            56799999998764322111     1122456999999998889999999999999999998 99999765544333322


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      .....                                                 ...+..++..+.+|+.+||+.||.+|
T Consensus       210 ~~~~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R  240 (252)
T cd05084         210 EQGVR-------------------------------------------------LPCPELCPDAVYRLMERCWEYDPGQR  240 (252)
T ss_pred             HcCCC-------------------------------------------------CCCcccCCHHHHHHHHHHcCCChhhC
Confidence            21100                                                 01123456788999999999999999


Q ss_pred             CCHHHHhC
Q 015867          383 LTARQALN  390 (399)
Q Consensus       383 ~t~~ell~  390 (399)
                      ||+.++++
T Consensus       241 ps~~~~~~  248 (252)
T cd05084         241 PSFSTVHQ  248 (252)
T ss_pred             cCHHHHHH
Confidence            99999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-39  Score=298.34  Aligned_cols=248  Identities=29%  Similarity=0.455  Sum_probs=201.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc------hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI------RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+|++.+.||+|+||.||+|.+..+++.||+|.+...      ......+..|+++++.+.      |+||+++++++.+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~------h~~i~~~~~~~~~   75 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLR------HDRIVQYYGCLRD   75 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcC------CCCcceEEEEEEc
Confidence            3699999999999999999999999999999987532      122345667888888775      4899999998865


Q ss_pred             C--CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          140 R--NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       140 ~--~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      .  ..+++||||+ +++|.+++...+  .+++..+..++.|++.||.|||+.|++|+||||+||+++             
T Consensus        76 ~~~~~~~~v~e~~~~~~L~~~~~~~~--~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~-------------  140 (264)
T cd06653          76 PEEKKLSIFVEYMPGGSIKDQLKAYG--ALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD-------------  140 (264)
T ss_pred             CCCCEEEEEEEeCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc-------------
Confidence            3  5789999999 899999998765  489999999999999999999999999999999999983             


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCC------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQ------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                                 .++.++|+|||++.....      ......|+..|+|||++.+..++.++|+|||||++|+|++|+.||
T Consensus       141 -----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~  209 (264)
T cd06653         141 -----------SAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPW  209 (264)
T ss_pred             -----------CCCCEEECccccccccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCC
Confidence                       466799999998865321      123456899999999999988999999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      ..........++..   ...                                             ....++.++..+.++
T Consensus       210 ~~~~~~~~~~~~~~---~~~---------------------------------------------~~~~p~~~~~~~~~~  241 (264)
T cd06653         210 AEYEAMAAIFKIAT---QPT---------------------------------------------KPMLPDGVSDACRDF  241 (264)
T ss_pred             CccCHHHHHHHHHc---CCC---------------------------------------------CCCCCcccCHHHHHH
Confidence            76554443332211   100                                             001224567888999


Q ss_pred             HHHccccCCCCCCCHHHHhCCccc
Q 015867          371 LHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      |.+||+ +|..|||+.++++|||.
T Consensus       242 i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         242 LKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             HHHHhc-CcccCccHHHHhcCCCC
Confidence            999999 67999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=8.8e-42  Score=318.64  Aligned_cols=233  Identities=27%  Similarity=0.394  Sum_probs=192.3

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL  150 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  150 (399)
                      ++-||+|+.|.||+++.  .++.||||.++..      ...+++-|++|      .|+||+.+.+.+.....+|||||||
T Consensus       129 LeWlGSGaQGAVF~Grl--~netVAVKKV~el------kETdIKHLRkL------kH~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  129 LEWLGSGAQGAVFLGRL--HNETVAVKKVREL------KETDIKHLRKL------KHPNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             hhhhccCcccceeeeec--cCceehhHHHhhh------hhhhHHHHHhc------cCcceeeEeeeecCCceeEEeeecc
Confidence            35699999999999975  4678999987431      22244444444      4699999999999999999999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCC
Q 015867          151 -GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS  229 (399)
Q Consensus       151 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (399)
                       .|.|+.+|+...  .+.......|..+|+.|++|||.+.|||||||.-||||.                        .+
T Consensus       195 a~GqL~~VLka~~--~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs------------------------~~  248 (904)
T KOG4721|consen  195 AQGQLYEVLKAGR--PITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILIS------------------------YD  248 (904)
T ss_pred             ccccHHHHHhccC--ccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEee------------------------cc
Confidence             999999998866  689999999999999999999999999999999999995                        46


Q ss_pred             CceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Q 015867          230 SAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG  307 (399)
Q Consensus       230 ~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~  307 (399)
                      ..|||+|||.+.....  ..-+++||..|||||++...+.+.|+|||||||+|||||||..||...+...+++-+-.   
T Consensus       249 d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIwGVGs---  325 (904)
T KOG4721|consen  249 DVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIWGVGS---  325 (904)
T ss_pred             ceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEEeccC---
Confidence            6799999998765333  33568999999999999999999999999999999999999999976555443332211   


Q ss_pred             CCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHH
Q 015867          308 PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQ  387 (399)
Q Consensus       308 ~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e  387 (399)
                                         ..-++                          +-+..++.-|+-||++||.-.|..||++.+
T Consensus       326 -------------------NsL~L--------------------------pvPstcP~GfklL~Kqcw~sKpRNRPSFrq  360 (904)
T KOG4721|consen  326 -------------------NSLHL--------------------------PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQ  360 (904)
T ss_pred             -------------------Ccccc--------------------------cCcccCchHHHHHHHHHHhcCCCCCccHHH
Confidence                               01122                          233477888999999999999999999999


Q ss_pred             HhCC
Q 015867          388 ALNH  391 (399)
Q Consensus       388 ll~h  391 (399)
                      +|.|
T Consensus       361 il~H  364 (904)
T KOG4721|consen  361 ILLH  364 (904)
T ss_pred             HHHH
Confidence            9998

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=100.00  E-value=9.9e-40  Score=296.76  Aligned_cols=249  Identities=27%  Similarity=0.418  Sum_probs=204.4

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +|++.+.||.|+||.||++.+..+++.||+|.+....   .....+..|+++++.+.      |+||+++++++......
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~   74 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVN------HPNIISYKEAFLDGNKL   74 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCC------CCCchhhhhhhccCCEE
Confidence            5899999999999999999999999999999987532   22344556777777665      58999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ++||||+ +++|.+++....  ...+++..+..++.|++.||.|||+.|++|+||+|+||+++                 
T Consensus        75 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~-----------------  137 (256)
T cd08530          75 CIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV-----------------  137 (256)
T ss_pred             EEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe-----------------
Confidence            9999999 999999987621  23589999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                             .++.++|+|||++..... ......|+..|+|||.+.+..++.++|+||||+++|+|++|+.||...+..+..
T Consensus       138 -------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~  210 (256)
T cd08530         138 -------ANDLVKIGDLGISKVLKKNMAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLR  210 (256)
T ss_pred             -------cCCcEEEeeccchhhhccCCcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                   356799999998765333 223456889999999999989999999999999999999999999877665444


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.....  +                                               .....++.++.++|.+||..||
T Consensus       211 ~~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~li~~~l~~~p  241 (256)
T cd08530         211 YKVQRGKY--P-----------------------------------------------PIPPIYSQDLQNFIRSMLQVKP  241 (256)
T ss_pred             HHHhcCCC--C-----------------------------------------------CCchhhCHHHHHHHHHHcCCCc
Confidence            33322110  0                                               0112456778999999999999


Q ss_pred             CCCCCHHHHhCCccc
Q 015867          380 SERLTARQALNHPFF  394 (399)
Q Consensus       380 ~~R~t~~ell~hp~f  394 (399)
                      .+|||+.++++||++
T Consensus       242 ~~Rp~~~~~l~~p~~  256 (256)
T cd08530         242 KLRPNCDKILASPAV  256 (256)
T ss_pred             ccCCCHHHHhcCCCC
Confidence            999999999999985

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=100.00  E-value=2.9e-40  Score=308.36  Aligned_cols=248  Identities=21%  Similarity=0.297  Sum_probs=195.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeE--EEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQER--VAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~--vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|.+..++..  +|+|.+...  ......+..|++++..+.     +|+||+++++++..++
T Consensus         7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~-----~h~~iv~~~~~~~~~~   81 (303)
T cd05088           7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHRG   81 (303)
T ss_pred             hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhc-----CCCCcceEEEEECCCC
Confidence            4699999999999999999998777654  577766532  223345667888888774     3699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          142 HICIVFEKL-GPSLFDFLKRNK--------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                      ..++||||+ +++|.+++....              ...+++..+..++.||+.||+|||++||+||||||+|||++   
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~---  158 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---  158 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec---
Confidence            999999999 899999997543              12478999999999999999999999999999999999994   


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCc--ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  284 (399)
                                           .++.++|+|||++........  ...++..|+|||++.+..++.++|||||||++|+|+
T Consensus       159 ---------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell  217 (303)
T cd05088         159 ---------------------ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV  217 (303)
T ss_pred             ---------------------CCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHH
Confidence                                 466799999998764322111  223456799999998888999999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhh
Q 015867          285 T-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA  363 (399)
Q Consensus       285 ~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (399)
                      + |..||...+..+....+....                         .+                        ..+..+
T Consensus       218 t~g~~p~~~~~~~~~~~~~~~~~-------------------------~~------------------------~~~~~~  248 (303)
T cd05088         218 SLGGTPYCGMTCAELYEKLPQGY-------------------------RL------------------------EKPLNC  248 (303)
T ss_pred             hcCCCCcccCChHHHHHHHhcCC-------------------------cC------------------------CCCCCC
Confidence            8 999998766544433221100                         00                        001234


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          364 RSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       364 ~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      +.++.+||.+||+.||.+||++.+++++
T Consensus       249 ~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         249 DDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            6678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=100.00  E-value=9.4e-40  Score=296.83  Aligned_cols=248  Identities=31%  Similarity=0.487  Sum_probs=206.0

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC--C
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR--N  141 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~--~  141 (399)
                      +|.+.+.||+|++|.||+|.+..+++.|++|++....   .....+..|+++++.+.      |++|+++++.+...  .
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~   74 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQ------HPNIVRYYGSERDEEKN   74 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcC------CCCEeeEEEEEecCCCC
Confidence            4889999999999999999999899999999987654   34566777888888875      59999999999888  8


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ +++|.+++.+..  .+++..+..++.|++.||+|||+.|++|+||+|+||+++                 
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~-----------------  135 (260)
T cd06606          75 TLNIFLEYVSGGSLSSLLKKFG--KLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD-----------------  135 (260)
T ss_pred             eEEEEEEecCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc-----------------
Confidence            999999999 999999998776  699999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                             .++.++|+|||.+......     .....++..|+|||.+.+..++.++|+||||+++|+|++|..||...+.
T Consensus       136 -------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  208 (260)
T cd06606         136 -------SDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN  208 (260)
T ss_pred             -------CCCCEEEcccccEEecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc
Confidence                   4677999999987654433     2345789999999999988899999999999999999999999987652


Q ss_pred             -HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          296 -LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       296 -~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                       ......+...                      ...                          ...+...+..+.+||.+|
T Consensus       209 ~~~~~~~~~~~----------------------~~~--------------------------~~~~~~~~~~l~~~i~~~  240 (260)
T cd06606         209 PMAALYKIGSS----------------------GEP--------------------------PEIPEHLSEEAKDFLRKC  240 (260)
T ss_pred             hHHHHHhcccc----------------------CCC--------------------------cCCCcccCHHHHHHHHHh
Confidence             2212111100                      000                          011124467889999999


Q ss_pred             cccCCCCCCCHHHHhCCccc
Q 015867          375 LRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f  394 (399)
                      |..||.+||++.++++||||
T Consensus       241 l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         241 LRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             CcCChhhCCCHHHHhhCCCC
Confidence            99999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=100.00  E-value=7.5e-40  Score=299.75  Aligned_cols=247  Identities=27%  Similarity=0.417  Sum_probs=198.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|++..+++.||||.+...    ......+..|+++++.+.      |+|++++++++...+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~   75 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN------HPNVIKYLDSFIEDN   75 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCC------CcceeeeeeeEEECC
Confidence            4799999999999999999999999999999987542    222344666888887775      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ..++||||+ +++|.+++...  ....+++..+..++.||+.||.|||++|++|+||||+||+++               
T Consensus        76 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---------------  140 (267)
T cd08228          76 ELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---------------  140 (267)
T ss_pred             eEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---------------
Confidence            999999999 88999988642  223589999999999999999999999999999999999994               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                               .++.++|+|||.+.......   ....|++.|+|||.+.+..++.++|+||||+++|+|++|..||.....
T Consensus       141 ---------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~  211 (267)
T cd08228         141 ---------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM  211 (267)
T ss_pred             ---------CCCCEEECccccceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc
Confidence                     45679999999876543322   245688999999999988899999999999999999999999965432


Q ss_pred             --HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          296 --LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       296 --~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                        .+....+...  ..|+                                              .....++..+.+||.+
T Consensus       212 ~~~~~~~~~~~~--~~~~----------------------------------------------~~~~~~~~~~~~li~~  243 (267)
T cd08228         212 NLFSLCQKIEQC--DYPP----------------------------------------------LPTEHYSEKLRELVSM  243 (267)
T ss_pred             cHHHHHHHHhcC--CCCC----------------------------------------------CChhhcCHHHHHHHHH
Confidence              1222221110  0000                                              0112456778999999


Q ss_pred             ccccCCCCCCCHHHHhC
Q 015867          374 LLRYDPSERLTARQALN  390 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~  390 (399)
                      ||..||.+|||+.++++
T Consensus       244 cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         244 CIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             HCCCCcccCcCHHHHHH
Confidence            99999999999999987

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=100.00  E-value=9.4e-40  Score=306.91  Aligned_cols=251  Identities=26%  Similarity=0.398  Sum_probs=202.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ..|...+.||+|+||.||++.+..++..||+|.+....    .....+..|+++++.+.      |+|++++++++..++
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~   98 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIK------HPNSIEYKGCYLREH   98 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCC------CCCEEEEEEEEeeCC
Confidence            34889999999999999999998899999999986432    12234556777776664      599999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          142 HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       142 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ..++||||+.++|.+++..... .+++..+..++.||+.||.|||+.||+|+||+|+||++                   
T Consensus        99 ~~~lv~e~~~g~l~~~~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~-------------------  158 (317)
T cd06635          99 TAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL-------------------  158 (317)
T ss_pred             eEEEEEeCCCCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEE-------------------
Confidence            9999999997788888765433 58999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           +.++.++|+|||++..... .....|+..|+|||++.   ...++.++|+|||||++|+|++|..||...+....
T Consensus       159 -----~~~~~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~  232 (317)
T cd06635         159 -----TEPGQVKLADFGSASIASP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA  232 (317)
T ss_pred             -----CCCCCEEEecCCCccccCC-cccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence                 3466799999998765432 33457899999999984   45688999999999999999999999987665554


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.....+.                                                .....++..+.+||.+||+.|
T Consensus       233 ~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~li~~~l~~~  264 (317)
T cd06635         233 LYHIAQNESPT------------------------------------------------LQSNEWSDYFRNFVDSCLQKI  264 (317)
T ss_pred             HHHHHhccCCC------------------------------------------------CCCccccHHHHHHHHHHccCC
Confidence            44443321100                                                001234567899999999999


Q ss_pred             CCCCCCHHHHhCCccccC
Q 015867          379 PSERLTARQALNHPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~  396 (399)
                      |.+|||+.++++|+|+..
T Consensus       265 p~~Rpt~~~il~~~~~~~  282 (317)
T cd06635         265 PQDRPTSEELLKHMFVLR  282 (317)
T ss_pred             cccCcCHHHHHhChhhhc
Confidence            999999999999999865

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=100.00  E-value=5.2e-40  Score=305.66  Aligned_cols=255  Identities=26%  Similarity=0.410  Sum_probs=198.8

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||||.++....  .......|..++...     .+|+||+++++++......
T Consensus        15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~-----~~~~~i~~~~~~~~~~~~~   89 (296)
T cd06618          15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKS-----HDCPYIVKCYGYFITDSDV   89 (296)
T ss_pred             chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhc-----cCCCchHhhheeeecCCeE
Confidence            569999999999999999999988899999999875321  223334455444333     2579999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||||++++|.+++..... .+++..+..++.||+.||+|||+ .||+||||+|+||++                    
T Consensus        90 ~~v~e~~~~~l~~l~~~~~~-~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill--------------------  148 (296)
T cd06618          90 FICMELMSTCLDKLLKRIQG-PIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL--------------------  148 (296)
T ss_pred             EEEeeccCcCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEE--------------------
Confidence            99999998888888766433 68999999999999999999997 599999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCC----CCCcchhHHHHHHHHHHHhCCCCCCCCCc-
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALFQTHEN-  295 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~ell~g~~Pf~~~~~-  295 (399)
                          +.++.++|+|||.+.....  ......++..|+|||.+.+..    ++.++|+||||+++|+|++|+.||..... 
T Consensus       149 ----~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~  224 (296)
T cd06618         149 ----DASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE  224 (296)
T ss_pred             ----cCCCCEEECccccchhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH
Confidence                3467799999998765322  123345788999999987653    88999999999999999999999975332 


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+.+..+.....                       ..++                        ....++.++.+||.+||
T Consensus       225 ~~~~~~~~~~~~-----------------------~~~~------------------------~~~~~~~~l~~li~~~l  257 (296)
T cd06618         225 FEVLTKILQEEP-----------------------PSLP------------------------PNEGFSPDFCSFVDLCL  257 (296)
T ss_pred             HHHHHHHhcCCC-----------------------CCCC------------------------CCCCCCHHHHHHHHHHc
Confidence            222222211100                       0000                        00135677899999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCC
Q 015867          376 RYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ..||.+|||+.++++||||+..
T Consensus       258 ~~~p~~Rp~~~~il~~~~~~~~  279 (296)
T cd06618         258 TKDHRKRPKYRELLQHPFIRRY  279 (296)
T ss_pred             cCChhhCCCHHHHhcChhhhcc
Confidence            9999999999999999999864

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=100.00  E-value=3.3e-40  Score=309.87  Aligned_cols=245  Identities=20%  Similarity=0.283  Sum_probs=193.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeE----EEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQER----VAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~----vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+|++.+.||+|+||.||+|.+..++..    ||+|+++..  ......+..|+.+++.+.      |+||+++++++..
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~~~g~~~~   80 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD------NPHVCRLLGICLT   80 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEcC
Confidence            4699999999999999999987665553    899998643  233445667777777764      5999999998876


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      . ..++|++|+ +|+|.+++..... .++...+..++.||+.||+|||++||+||||||+|||++               
T Consensus        81 ~-~~~~v~e~~~~g~l~~~l~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---------------  143 (316)
T cd05108          81 S-TVQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---------------  143 (316)
T ss_pred             C-CceeeeecCCCCCHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---------------
Confidence            4 567899999 9999999987543 588999999999999999999999999999999999994               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCCc-----ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT  292 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~  292 (399)
                               .++.+||+|||++........     ...++..|+|||++.+..++.++|||||||++|+|++ |..||.+
T Consensus       144 ---------~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~  214 (316)
T cd05108         144 ---------TPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG  214 (316)
T ss_pred             ---------CCCcEEEccccccccccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCC
Confidence                     456799999999876433221     2234668999999999999999999999999999998 9999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      ....+....+ .....+                                                ..++.++.++.+++.
T Consensus       215 ~~~~~~~~~~-~~~~~~------------------------------------------------~~~~~~~~~~~~li~  245 (316)
T cd05108         215 IPASEISSIL-EKGERL------------------------------------------------PQPPICTIDVYMIMV  245 (316)
T ss_pred             CCHHHHHHHH-hCCCCC------------------------------------------------CCCCCCCHHHHHHHH
Confidence            6544332221 111000                                                011245667889999


Q ss_pred             HccccCCCCCCCHHHHhCC
Q 015867          373 GLLRYDPSERLTARQALNH  391 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~h  391 (399)
                      +||..||.+|||+.+++.+
T Consensus       246 ~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         246 KCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             HHccCChhhCcCHHHHHHH
Confidence            9999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=100.00  E-value=7.1e-40  Score=303.54  Aligned_cols=246  Identities=21%  Similarity=0.322  Sum_probs=198.5

Q ss_pred             CCEEEEeeeccccceEEEEEEE-----ccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWD-----RQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+|.+.+.||.|+||.||++.+     ..++..+|+|.+.... .....+..|+++++.+.      |++++++++++..
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~   78 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ------HEHIVKFYGVCVE   78 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEec
Confidence            3699999999999999999975     3356779999986532 33455777888888775      5899999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCC-----------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccc
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKY-----------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEF  207 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~-----------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~  207 (399)
                      .+..++||||+ +++|.+++...+.           ..+++..+..++.||+.||+|||+.|++||||||+|||++    
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~----  154 (288)
T cd05093          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG----  154 (288)
T ss_pred             CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc----
Confidence            99999999999 8999999975431           2489999999999999999999999999999999999994    


Q ss_pred             ccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHH
Q 015867          208 IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE  282 (399)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  282 (399)
                                          .++.++|+|||++.......     ....++..|+|||++.+..++.++|+|||||++|+
T Consensus       155 --------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~  214 (288)
T cd05093         155 --------------------ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWE  214 (288)
T ss_pred             --------------------cCCcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHH
Confidence                                46679999999886533221     22345778999999999899999999999999999


Q ss_pred             HHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccch
Q 015867          283 LCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD  361 (399)
Q Consensus       283 ll~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (399)
                      |++ |..||......+....+......                                                 ....
T Consensus       215 l~t~g~~p~~~~~~~~~~~~i~~~~~~-------------------------------------------------~~~~  245 (288)
T cd05093         215 IFTYGKQPWYQLSNNEVIECITQGRVL-------------------------------------------------QRPR  245 (288)
T ss_pred             HHhCCCCCCCCCCHHHHHHHHHcCCcC-------------------------------------------------CCCC
Confidence            998 99999877665554444321100                                                 0012


Q ss_pred             hhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          362 RARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       362 ~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      .++.++.+|+.+||+.||.+|||+.+++.
T Consensus       246 ~~~~~l~~li~~~l~~~p~~Rpt~~~v~~  274 (288)
T cd05093         246 TCPKEVYDLMLGCWQREPHMRLNIKEIHS  274 (288)
T ss_pred             CCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            35677899999999999999999999854

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=100.00  E-value=7.6e-40  Score=299.69  Aligned_cols=246  Identities=22%  Similarity=0.304  Sum_probs=198.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccC---CeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQT---QERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ++|++.+.||+|+||.||+|.+..+   ...||||+++...  .....+..|+.+++.+.      |+||+++++++...
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~   77 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFD------HPNIIRLEGVVTKS   77 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCC------CCCcceEeEEEecC
Confidence            4699999999999999999987543   4579999886432  23345667888877775      58999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++..... .+++..+..++.|++.||+|||+.||+|+||||+|||++                
T Consensus        78 ~~~~iv~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~----------------  140 (266)
T cd05033          78 RPVMIITEYMENGSLDKFLRENDG-KFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN----------------  140 (266)
T ss_pred             CceEEEEEcCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc----------------
Confidence            9999999999 8999999977543 689999999999999999999999999999999999994                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTH  293 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~  293 (399)
                              .++.++|+|||++.......     ....++..|+|||.+.+..++.++|+||||+++|+|++ |..||...
T Consensus       141 --------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~  212 (266)
T cd05033         141 --------SNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDM  212 (266)
T ss_pred             --------CCCCEEECccchhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCC
Confidence                    46679999999887643211     12234678999999999899999999999999999998 99999776


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      ...+....+......                                                 .....++..+.+|+.+
T Consensus       213 ~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~  243 (266)
T cd05033         213 SNQDVIKAVEDGYRL-------------------------------------------------PPPMDCPSALYQLMLD  243 (266)
T ss_pred             CHHHHHHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHH
Confidence            655444433221100                                                 0112456778999999


Q ss_pred             ccccCCCCCCCHHHHhCC
Q 015867          374 LLRYDPSERLTARQALNH  391 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~h  391 (399)
                      ||+.||.+||++.+++++
T Consensus       244 cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         244 CWQKDRNERPTFSQIVST  261 (266)
T ss_pred             HcCCCcccCcCHHHHHHH
Confidence            999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=100.00  E-value=7.7e-40  Score=305.37  Aligned_cols=249  Identities=22%  Similarity=0.354  Sum_probs=199.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEE-----ccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWD-----RQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|.+.+.||+|+||.||++.+     ..++..||+|.++...  .....+..|+++++.+.     .|+||+++++++
T Consensus        34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~  108 (302)
T cd05055          34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLG-----NHENIVNLLGAC  108 (302)
T ss_pred             HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhcc-----CCCCcceEEEEE
Confidence            45799999999999999999975     3456689999886532  22345677888888873     369999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      ...+..++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+|+||||+|||++             
T Consensus       109 ~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~-------------  175 (302)
T cd05055         109 TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT-------------  175 (302)
T ss_pred             ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc-------------
Confidence            9999999999999 89999999875544589999999999999999999999999999999999993             


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALF  290 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf  290 (399)
                                 .++.++|+|||++......     .....++..|+|||++.+..++.++|||||||++|+|++ |..||
T Consensus       176 -----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~  244 (302)
T cd05055         176 -----------HGKIVKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPY  244 (302)
T ss_pred             -----------CCCeEEECCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCc
Confidence                       4567999999988653322     122346778999999999999999999999999999998 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      ......+....+......                                                ...+...+.++.+|
T Consensus       245 ~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~l  276 (302)
T cd05055         245 PGMPVDSKFYKLIKEGYR------------------------------------------------MAQPEHAPAEIYDI  276 (302)
T ss_pred             CCCCchHHHHHHHHcCCc------------------------------------------------CCCCCCCCHHHHHH
Confidence            876654433322211000                                                00112346678999


Q ss_pred             HHHccccCCCCCCCHHHHhC
Q 015867          371 LHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~  390 (399)
                      +.+||..||.+|||+.|+++
T Consensus       277 i~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         277 MKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             HHHHcCCCchhCcCHHHHHH
Confidence            99999999999999999975

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=100.00  E-value=7.4e-40  Score=306.23  Aligned_cols=249  Identities=18%  Similarity=0.288  Sum_probs=196.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEcc-------CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQ-------TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      .++|.+.+.||+|+||.||++.+..       +...+|+|.+....  .....+..|+++++.+.     +|+||+++++
T Consensus        17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~   91 (307)
T cd05098          17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLG   91 (307)
T ss_pred             hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhc-----CCCCEeeEEE
Confidence            4579999999999999999997643       23569999987532  22345666777777763     3699999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNKY--------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      ++...+..|+||||+ +++|.+++.....              ..+++..+..++.|++.||+|||+.|++||||||+||
T Consensus        92 ~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  171 (307)
T cd05098          92 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  171 (307)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHhe
Confidence            999999999999999 8899999976431              2478899999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWS  275 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diws  275 (399)
                      |++                        .++.++|+|||.+......     .....++..|+|||++.+..++.++|+||
T Consensus       172 ll~------------------------~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvws  227 (307)
T cd05098         172 LVT------------------------EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS  227 (307)
T ss_pred             EEc------------------------CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHH
Confidence            994                        4567999999987653321     11123456899999999989999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          276 VGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       276 lG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      |||++|+|++ |..||...+..+....+.....                                               
T Consensus       228 lG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-----------------------------------------------  260 (307)
T cd05098         228 FGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR-----------------------------------------------  260 (307)
T ss_pred             HHHHHHHHHcCCCCCCCcCCHHHHHHHHHcCCC-----------------------------------------------
Confidence            9999999998 8999976554443333321100                                               


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                        ...+..++.++.+||.+||..||.+|||+.+++++
T Consensus       261 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         261 --MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             --CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence              01112456788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=100.00  E-value=6e-40  Score=306.98  Aligned_cols=251  Identities=27%  Similarity=0.375  Sum_probs=202.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ..|...+.||.|+||.||+|++..+++.+|+|.+....    .....+..|+++++.+.      |+|++++++++....
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~   88 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR------HPNTIQYRGCYLREH   88 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCC------CCCcccEEEEEEcCC
Confidence            45888899999999999999999899999999986421    12234556777777764      589999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          142 HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       142 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ..++||||+.++|.+++..... .+++..+..++.|++.||.|||+.|++|+||||+||+++                  
T Consensus        89 ~~~lv~e~~~~~l~~~~~~~~~-~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~------------------  149 (308)
T cd06634          89 TAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS------------------  149 (308)
T ss_pred             eeEEEEEccCCCHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC------------------
Confidence            9999999997788888765442 589999999999999999999999999999999999993                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                            .++.++|+|||++..... .....|+..|+|||.+.   ...++.++|||||||++|+|++|..||...+..+.
T Consensus       150 ------~~~~~kl~dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~  222 (308)
T cd06634         150 ------EPGLVKLGDFGSASIMAP-ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA  222 (308)
T ss_pred             ------CCCcEEECCcccceeecC-cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHH
Confidence                  466799999998765433 23457899999999985   34688899999999999999999999976554444


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.....+.                                                .....++..+.+||.+||..+
T Consensus       223 ~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~li~~cl~~~  254 (308)
T cd06634         223 LYHIAQNESPA------------------------------------------------LQSGHWSEYFRNFVDSCLQKI  254 (308)
T ss_pred             HHHHhhcCCCC------------------------------------------------cCcccccHHHHHHHHHHhhCC
Confidence            33332211000                                                001245677899999999999


Q ss_pred             CCCCCCHHHHhCCccccC
Q 015867          379 PSERLTARQALNHPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~  396 (399)
                      |.+||++.++++|||+..
T Consensus       255 P~~Rp~~~~ll~~~~~~~  272 (308)
T cd06634         255 PQDRPTSEVLLKHRFVLR  272 (308)
T ss_pred             cccCCCHHHHhhCccccc
Confidence            999999999999999875

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-39  Score=299.90  Aligned_cols=247  Identities=22%  Similarity=0.351  Sum_probs=196.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccC-----CeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQT-----QERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|++.+.||+|+||.||+|.+...     +..||+|.+....  .....+..|+.+++.+.      |+|++++++++
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~   78 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFN------CHHVVRLLGVV   78 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCC------CCceeEEEEEE
Confidence            35799999999999999999987643     4789999986432  22334556777766654      58999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNK--------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      ......++||||+ +++|.+++....        ...+++..+..++.||+.||.|||+.||+|+||||+|||++     
T Consensus        79 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~-----  153 (277)
T cd05032          79 STGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA-----  153 (277)
T ss_pred             cCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc-----
Confidence            9999999999999 899999997532        12367889999999999999999999999999999999994     


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHH
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  283 (399)
                                         .++.++|+|||++......     .....++..|+|||.+.+..++.++|||||||++|++
T Consensus       154 -------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  214 (277)
T cd05032         154 -------------------EDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEM  214 (277)
T ss_pred             -------------------CCCCEEECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHh
Confidence                               4677999999987643221     2234567899999999988899999999999999999


Q ss_pred             Hh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh
Q 015867          284 CT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR  362 (399)
Q Consensus       284 l~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (399)
                      ++ |..||...+..+....+...  ..                     .                          ..+..
T Consensus       215 ~t~g~~p~~~~~~~~~~~~~~~~--~~---------------------~--------------------------~~~~~  245 (277)
T cd05032         215 ATLAEQPYQGLSNEEVLKFVIDG--GH---------------------L--------------------------DLPEN  245 (277)
T ss_pred             hccCCCCCccCCHHHHHHHHhcC--CC---------------------C--------------------------CCCCC
Confidence            98 99999876655544333211  00                     0                          01123


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          363 ARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       363 ~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ++.++.+||.+||+.||.+|||+.++++
T Consensus       246 ~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         246 CPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            4677899999999999999999999976

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=100.00  E-value=1.2e-39  Score=305.69  Aligned_cols=280  Identities=20%  Similarity=0.218  Sum_probs=197.7

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      +.+.+|.|  |.||.++...+++.||||+++..   ......+..|+++++.+.      |+||+++++.+...+..+++
T Consensus         6 i~~~~~~~--~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~------h~~i~~~~~~~~~~~~~~~~   77 (314)
T cd08216           6 IGKCFEDL--MIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQ------HPNILPYVTSFIVDSELYVV   77 (314)
T ss_pred             hhHhhcCC--ceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcC------CcchhhhhheeecCCeEEEE
Confidence            33444444  55566666778999999998653   233356777888888775      59999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|.+++.......+++..+..++.|++.||+|||++||+|+||||+||+++.                     
T Consensus        78 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~---------------------  136 (314)
T cd08216          78 SPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSG---------------------  136 (314)
T ss_pred             EeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEec---------------------
Confidence            9999 899999998765446899999999999999999999999999999999999953                     


Q ss_pred             CCCCCceEEeecCCcccCCC----------CCcccccCCCccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          226 LPKSSAIKLIDFGSTAFDNQ----------NHSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                         ++.++|+|||.+.....          ......++..|+|||++..  ..++.++|+|||||++|+|++|..||...
T Consensus       137 ---~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~  213 (314)
T cd08216         137 ---DGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDM  213 (314)
T ss_pred             ---CCceEEecCccceeeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCC
Confidence               56688999987643211          1123457888999999976  36889999999999999999999999875


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHH-HHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES-IKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .......  ....+..+..+...               .+|........ ....................++.++.+||.
T Consensus       214 ~~~~~~~--~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  276 (314)
T cd08216         214 PATQMLL--EKVRGTVPCLLDKS---------------TYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVE  276 (314)
T ss_pred             CHHHHHH--HHHhccCccccccC---------------chhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHH
Confidence            5433322  12222211110000               00000000000 000000000111112233456788999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||..||.+|||+.++|+||||+++.
T Consensus       277 ~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         277 LCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             HHhhcCCCcCcCHHHHhcCchHhhhc
Confidence            99999999999999999999999874

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=100.00  E-value=1.2e-39  Score=296.86  Aligned_cols=241  Identities=22%  Similarity=0.373  Sum_probs=198.7

Q ss_pred             eeeccccceEEEEEEEccC---CeEEEEEEEecchhh--hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQT---QERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      +.||+|+||.||+|.+...   +..|++|.+......  ...+..|+++++.+.      |+|++++++++......++|
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~~~~~lv   74 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLG------HPNVVRLLGVCTEEEPLYLV   74 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcC------CCChheeeeeecCCCceEEE
Confidence            4699999999999998765   889999999754332  455667777777764      59999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          147 FEKL-GPSLFDFLKRNK-------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~-------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      |||+ +++|.+++....       ...+++..+..++.|++.||+|||++|++|+||||+||++                
T Consensus        75 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili----------------  138 (262)
T cd00192          75 LEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV----------------  138 (262)
T ss_pred             EEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEE----------------
Confidence            9999 999999998751       2369999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT  292 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~  292 (399)
                              +.++.++|+|||.+......     .....++..|+|||.+....++.++|+||||+++|+|++ |..||..
T Consensus       139 --------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~  210 (262)
T cd00192         139 --------GEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPG  210 (262)
T ss_pred             --------CCCCcEEEcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCC
Confidence                    44678999999988764432     334567889999999998899999999999999999999 6999988


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      ....+....+....                                                 ....+..++.++.+++.
T Consensus       211 ~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~li~  241 (262)
T cd00192         211 LSNEEVLEYLRKGY-------------------------------------------------RLPKPEYCPDELYELML  241 (262)
T ss_pred             CCHHHHHHHHHcCC-------------------------------------------------CCCCCccCChHHHHHHH
Confidence            76555544443210                                                 00112345788999999


Q ss_pred             HccccCCCCCCCHHHHhCC
Q 015867          373 GLLRYDPSERLTARQALNH  391 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~h  391 (399)
                      +||..||.+|||+.+++++
T Consensus       242 ~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         242 SCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             HHccCCcccCcCHHHHHHh
Confidence            9999999999999999874

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.1e-39  Score=295.48  Aligned_cols=239  Identities=31%  Similarity=0.538  Sum_probs=200.1

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      ||.|+||.||++.+..+++.||+|++.....    ....+..|+++++.+.      |+|++++++.+..++..|+||||
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~~v~e~   74 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRIN------HPFIVKLHYAFQTEEKLYLVLEY   74 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcC------CCcHHHHHHHeecCCeeEEEEec
Confidence            6999999999999988899999999875332    2335666777777775      58999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      + +++|.+++....  .+++..+..++.|++.||.|||+.+++|+||||+||+++                        .
T Consensus        75 ~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~------------------------~  128 (250)
T cd05123          75 APGGELFSHLSKEG--RFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD------------------------A  128 (250)
T ss_pred             CCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc------------------------C
Confidence            9 999999998775  589999999999999999999999999999999999994                        4


Q ss_pred             CCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH
Q 015867          229 SSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA  305 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~  305 (399)
                      ++.++|+|||.+.....   ......|+..|+|||...+..++.++|+||||+++|++++|..||...+.......+...
T Consensus       129 ~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~  208 (250)
T cd05123         129 DGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKD  208 (250)
T ss_pred             CCcEEEeecCcceecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcC
Confidence            56799999998766433   234567899999999999888999999999999999999999999876654444333221


Q ss_pred             hCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCH
Q 015867          306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA  385 (399)
Q Consensus       306 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  385 (399)
                      ..                        .+                          +...+..+.+||.+||..||.+|||+
T Consensus       209 ~~------------------------~~--------------------------~~~~~~~l~~~i~~~l~~~p~~R~~~  238 (250)
T cd05123         209 PL------------------------RF--------------------------PEFLSPEARDLISGLLQKDPTKRLGS  238 (250)
T ss_pred             CC------------------------CC--------------------------CCCCCHHHHHHHHHHhcCCHhhCCCc
Confidence            11                        11                          12346778999999999999999999


Q ss_pred             ---HHHhCCccc
Q 015867          386 ---RQALNHPFF  394 (399)
Q Consensus       386 ---~ell~hp~f  394 (399)
                         +++++||||
T Consensus       239 ~~~~~l~~~~~f  250 (250)
T cd05123         239 GGAEEIKAHPFF  250 (250)
T ss_pred             ccHHHHHhCCCC
Confidence               999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=100.00  E-value=1.4e-39  Score=296.08  Aligned_cols=245  Identities=23%  Similarity=0.386  Sum_probs=199.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      .+|++.+.||+|+||.||++.+. .+..+|+|.+.........+..|+++++.+.      |++++++++++......++
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~   76 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMSEEDFIEEAQVMMKLS------HPKLVQLYGVCTERSPICL   76 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCCHHHHHHHHHHHHhCC------CCCeeeEEEEEccCCceEE
Confidence            36999999999999999999875 4668999998765444566778888888875      5899999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++..... .+++..+..++.|++.||++||+.|++|+||||+||+++                     
T Consensus        77 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---------------------  134 (256)
T cd05112          77 VFEFMEHGCLSDYLRAQRG-KFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---------------------  134 (256)
T ss_pred             EEEcCCCCcHHHHHHhCcc-CCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---------------------
Confidence            99999 8999999876543 588999999999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                         .++.++|+|||.+.......    ....++..|+|||.+.+..++.++|+||||+++|+|++ |..||......+..
T Consensus       135 ---~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~  211 (256)
T cd05112         135 ---ENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVV  211 (256)
T ss_pred             ---CCCeEEECCCcceeecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHH
Confidence               46679999999876432211    12235678999999998899999999999999999998 99999876665555


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......                                                 ..+...+..+.+|+.+||+.||
T Consensus       212 ~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~l~~~~l~~~p  242 (256)
T cd05112         212 ETINAGFRL-------------------------------------------------YKPRLASQSVYELMQHCWKERP  242 (256)
T ss_pred             HHHhCCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHcccCh
Confidence            444221100                                                 0012246678999999999999


Q ss_pred             CCCCCHHHHhCC
Q 015867          380 SERLTARQALNH  391 (399)
Q Consensus       380 ~~R~t~~ell~h  391 (399)
                      .+|||+.+++++
T Consensus       243 ~~Rp~~~~~l~~  254 (256)
T cd05112         243 EDRPSFSLLLHQ  254 (256)
T ss_pred             hhCCCHHHHHHh
Confidence            999999999863

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=100.00  E-value=1.2e-39  Score=302.73  Aligned_cols=249  Identities=20%  Similarity=0.313  Sum_probs=198.4

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccC-----CeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQT-----QERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|++.+.||+|+||.||++.....     ...+|+|.+....  .....+..|+++++.+.     .|+||+++++++
T Consensus        11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~~~~~   85 (293)
T cd05053          11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINLLGVC   85 (293)
T ss_pred             HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhc-----CCCCeeeEEEEE
Confidence            35799999999999999999987543     4789999986532  22344667888887763     369999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRN--------------KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL  202 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~--------------~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll  202 (399)
                      ...+..++||||+ +++|.+++...              ....+++..+..++.|++.||.|||+.||+||||||+|||+
T Consensus        86 ~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~  165 (293)
T cd05053          86 TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLV  165 (293)
T ss_pred             cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEE
Confidence            9999999999999 99999999753              22358899999999999999999999999999999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHH
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVG  277 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  277 (399)
                      +                        .++.++|+|||.+......     .....++..|+|||++.+..++.++||||||
T Consensus       166 ~------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  221 (293)
T cd05053         166 T------------------------EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFG  221 (293)
T ss_pred             c------------------------CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehh
Confidence            4                        4667999999988653321     1122346789999999998999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhh
Q 015867          278 CILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV  356 (399)
Q Consensus       278 ~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  356 (399)
                      |++|++++ |..||......+....+.....                       .                         
T Consensus       222 ~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-----------------------~-------------------------  253 (293)
T cd05053         222 VLLWEIFTLGGSPYPGIPVEELFKLLKEGYR-----------------------M-------------------------  253 (293)
T ss_pred             hHHHHHhcCCCCCCCCCCHHHHHHHHHcCCc-----------------------C-------------------------
Confidence            99999997 9999987665554433321100                       0                         


Q ss_pred             hccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       357 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                       ..+..++..+.+|+.+||..||.+|||+.|++++
T Consensus       254 -~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         254 -EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             -CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence             0112456778999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=100.00  E-value=1.1e-39  Score=298.58  Aligned_cols=247  Identities=27%  Similarity=0.411  Sum_probs=197.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||||.+....    .....+..|+.+++.+.      |+|++++++++...+
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~~~   75 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN------HPNVIKYYASFIEDN   75 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHcc------CCchhhhhheeEeCC
Confidence            46899999999999999999998899999999886422    22345666777777764      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ..++||||+ +++|.+++...  ....+++..+..++.||+.||.|||++|++|+||||+||+++               
T Consensus        76 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---------------  140 (267)
T cd08229          76 ELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---------------  140 (267)
T ss_pred             eEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---------------
Confidence            999999999 89999998742  223589999999999999999999999999999999999994               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                               .++.++|+|||++......   .....|+..|+|||.+.+..++.++|+||||+++|+|++|..||.+...
T Consensus       141 ---------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  211 (267)
T cd08229         141 ---------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM  211 (267)
T ss_pred             ---------CCCCEEECcchhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc
Confidence                     4667999999987654322   2345789999999999998999999999999999999999999975432


Q ss_pred             H--HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          296 L--EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       296 ~--~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      .  +....+....                          +|                      ......++..+.+||.+
T Consensus       212 ~~~~~~~~~~~~~--------------------------~~----------------------~~~~~~~~~~~~~li~~  243 (267)
T cd08229         212 NLYSLCKKIEQCD--------------------------YP----------------------PLPSDHYSEELRQLVNM  243 (267)
T ss_pred             hHHHHhhhhhcCC--------------------------CC----------------------CCCcccccHHHHHHHHH
Confidence            1  1111111000                          00                      00112457788999999


Q ss_pred             ccccCCCCCCCHHHHhC
Q 015867          374 LLRYDPSERLTARQALN  390 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~  390 (399)
                      ||+.||.+|||+.++++
T Consensus       244 ~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         244 CINPDPEKRPDITYVYD  260 (267)
T ss_pred             hcCCCcccCCCHHHHHH
Confidence            99999999999998764

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=100.00  E-value=2.9e-39  Score=294.91  Aligned_cols=246  Identities=26%  Similarity=0.375  Sum_probs=198.3

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..++|++.++||+|+||.||++.+. .+..+|+|.+.........+..|+++++.+.      |+|++++++.+.. ...
T Consensus         4 ~~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~-~~~   75 (260)
T cd05073           4 PRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ------HDKLVKLHAVVTK-EPI   75 (260)
T ss_pred             cccceeEEeEecCccceEEEEEEec-CCccEEEEecCCChhHHHHHHHHHHHHHhcC------CCCcceEEEEEcC-CCe
Confidence            3568999999999999999999754 4556999988765444566778888888775      4899999998887 788


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.+.....+++..+..++.|++.||.|||+.|++|+||||+||+++                   
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~-------------------  136 (260)
T cd05073          76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS-------------------  136 (260)
T ss_pred             EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc-------------------
Confidence            9999999 88999999876555688999999999999999999999999999999999993                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  297 (399)
                           .++.++|+|||.+......    .....++..|+|||++.+..++.++|+|||||++|++++ |..||...+..+
T Consensus       137 -----~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~  211 (260)
T cd05073         137 -----ASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE  211 (260)
T ss_pred             -----CCCcEEECCCcceeeccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHH
Confidence                 4667999999987643221    122345677999999998889999999999999999999 999998766544


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+.....                                                 .......+.++.+++.+||+.
T Consensus       212 ~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~~i~~~l~~  242 (260)
T cd05073         212 VIRALERGYR-------------------------------------------------MPRPENCPEELYNIMMRCWKN  242 (260)
T ss_pred             HHHHHhCCCC-------------------------------------------------CCCcccCCHHHHHHHHHHccc
Confidence            4433321100                                                 011134567789999999999


Q ss_pred             CCCCCCCHHHHhC
Q 015867          378 DPSERLTARQALN  390 (399)
Q Consensus       378 dP~~R~t~~ell~  390 (399)
                      ||.+||++.++++
T Consensus       243 ~p~~Rp~~~~l~~  255 (260)
T cd05073         243 RPEERPTFEYIQS  255 (260)
T ss_pred             CcccCcCHHHHHH
Confidence            9999999998864

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=100.00  E-value=1.8e-39  Score=301.80  Aligned_cols=253  Identities=21%  Similarity=0.309  Sum_probs=199.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCC----------------eEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQ----------------ERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGS  127 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~----------------~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~  127 (399)
                      ++|++.+.||+|+||.||+|.+..++                ..||+|.+....  .....+..|+++++.+.      |
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~------~   78 (296)
T cd05051           5 QPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLS------D   78 (296)
T ss_pred             hhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcC------C
Confidence            57999999999999999998876533                568999986532  33456677888888875      4


Q ss_pred             cceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 015867          128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY---------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKP  197 (399)
Q Consensus       128 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp  197 (399)
                      +||+++++++..++..++|||++ +++|.+++.....         ..+++..+..++.|++.||.|||+.||+|+||||
T Consensus        79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp  158 (296)
T cd05051          79 PNIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLAT  158 (296)
T ss_pred             CCEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccch
Confidence            89999999999999999999999 8999999976541         2589999999999999999999999999999999


Q ss_pred             CcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcch
Q 015867          198 ENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCD  272 (399)
Q Consensus       198 ~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~D  272 (399)
                      +||+++                        .++.++|+|||.+......     .....++..|+|||++.+..++.++|
T Consensus       159 ~Nili~------------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  214 (296)
T cd05051         159 RNCLVG------------------------KNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSD  214 (296)
T ss_pred             hceeec------------------------CCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccch
Confidence            999994                        4577999999987643221     23345678899999999888999999


Q ss_pred             hHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhh
Q 015867          273 MWSVGCILVELCT--GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD  350 (399)
Q Consensus       273 iwslG~il~ell~--g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  350 (399)
                      ||||||++|+|++  |..||...+..+.+..+.........                  .                    
T Consensus       215 v~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------------~--------------------  256 (296)
T cd05051         215 VWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGR------------------Q--------------------  256 (296)
T ss_pred             hhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccc------------------c--------------------
Confidence            9999999999998  78899776655554444322100000                  0                    


Q ss_pred             hhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                          .....++.++.++.+||.+||+.||.+|||+.|+++
T Consensus       257 ----~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         257 ----IYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             ----ccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence                000112345678999999999999999999999954

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=100.00  E-value=1.9e-39  Score=299.16  Aligned_cols=245  Identities=22%  Similarity=0.289  Sum_probs=191.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCe----EEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQE----RVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~----~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+|++.+.||+|+||+||+|.+..+++    .||+|+++...  .....+..|..+++.+      .|+||+.+++++.
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~------~~~~i~~~~~~~~   79 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV------GSPYVCRLLGICL   79 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhc------CCCCCceEEEEEc
Confidence            3579999999999999999998776665    48999986422  2234455666666655      4689999999886


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      . ...+++|+|+ +|+|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||+.              
T Consensus        80 ~-~~~~l~~~~~~~g~l~~~l~~~~~-~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~--------------  143 (279)
T cd05109          80 T-STVQLVTQLMPYGCLLDYVRENKD-RIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK--------------  143 (279)
T ss_pred             C-CCcEEEEEcCCCCCHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc--------------
Confidence            5 4578999999 8999999976432 589999999999999999999999999999999999993              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCCCc-----ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                                .++.+||+|||++........     ...++..|+|||.+.+..++.++|||||||++|||++ |..||.
T Consensus       144 ----------~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~  213 (279)
T cd05109         144 ----------SPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYD  213 (279)
T ss_pred             ----------CCCcEEECCCCceeecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCC
Confidence                      356699999998875432221     1234678999999999899999999999999999998 999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..........+......                                                 ..+..++.++.++|
T Consensus       214 ~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li  244 (279)
T cd05109         214 GIPAREIPDLLEKGERL-------------------------------------------------PQPPICTIDVYMIM  244 (279)
T ss_pred             CCCHHHHHHHHHCCCcC-------------------------------------------------CCCccCCHHHHHHH
Confidence            66554433333221000                                                 01124567789999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||..||.+||++.+++.
T Consensus       245 ~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         245 VKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             HHHcCCChhhCcCHHHHHH
Confidence            9999999999999999884

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=100.00  E-value=5.3e-40  Score=295.69  Aligned_cols=228  Identities=25%  Similarity=0.383  Sum_probs=183.8

Q ss_pred             ccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-CCCHH
Q 015867           77 GTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF  155 (399)
Q Consensus        77 G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~  155 (399)
                      |.+|.||+|++..+++.||+|.++....    ...|...+..      ..|+|++++++++...+..++||||+ +++|.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~~----~~~~~~~~~~------~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   73 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSSE----YSRERLTIIP------HCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLW   73 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchhh----hhhHHHHHHh------cCCCceeehhhheecCCeEEEEEecCCCCCHH
Confidence            8999999999999999999999876432    2222222221      24699999999999999999999999 89999


Q ss_pred             HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEe
Q 015867          156 DFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI  235 (399)
Q Consensus       156 ~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~  235 (399)
                      +++.+..  .+++..+..++.|++.||+|||++||+||||||+||+++                        .++.++++
T Consensus        74 ~~l~~~~--~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~------------------------~~~~~~l~  127 (237)
T cd05576          74 SHISKFL--NIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD------------------------DRGHIQLT  127 (237)
T ss_pred             HHHHHhc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc------------------------CCCCEEEe
Confidence            9997765  599999999999999999999999999999999999994                        45679999


Q ss_pred             ecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHH
Q 015867          236 DFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIR  315 (399)
Q Consensus       236 Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~  315 (399)
                      |||.+...........++..|+|||.+.+..++.++|+||+|+++|+|++|..||......     +.            
T Consensus       128 df~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~-----~~------------  190 (237)
T cd05576         128 YFSRWSEVEDSCDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG-----IN------------  190 (237)
T ss_pred             cccchhccccccccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh-----cc------------
Confidence            9998765544444556778899999998888999999999999999999999887532110     00            


Q ss_pred             HhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCH-----HHHhC
Q 015867          316 RASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA-----RQALN  390 (399)
Q Consensus       316 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-----~ell~  390 (399)
                                 ....                          ...++.++..+.+||.+||+.||.+|+|+     +++++
T Consensus       191 -----------~~~~--------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~  233 (237)
T cd05576         191 -----------THTT--------------------------LNIPEWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKS  233 (237)
T ss_pred             -----------cccc--------------------------cCCcccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHc
Confidence                       0000                          01113456788999999999999999986     99999


Q ss_pred             Cccc
Q 015867          391 HPFF  394 (399)
Q Consensus       391 hp~f  394 (399)
                      ||||
T Consensus       234 h~~~  237 (237)
T cd05576         234 HPFF  237 (237)
T ss_pred             CCCC
Confidence            9998

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=100.00  E-value=1.9e-39  Score=301.08  Aligned_cols=246  Identities=21%  Similarity=0.312  Sum_probs=197.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecchh-hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIRK-YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+|.+.+.||+|+||.||+|.+.     .++..+++|.+..... ....+..|+++++.+.      |+||+++++++..
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~   78 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ------HEHIVKFYGVCGD   78 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCC------CCCcceEEEEEcc
Confidence            46999999999999999999753     3466799998864332 2345667777777764      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEee
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKY--------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVS  204 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~  204 (399)
                      .+..++||||+ +++|.+++...+.              ..+++..+..++.||+.||+|||++||+||||||+|||++ 
T Consensus        79 ~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~-  157 (291)
T cd05094          79 GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG-  157 (291)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc-
Confidence            99999999999 9999999976431              2488999999999999999999999999999999999994 


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHH
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  279 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  279 (399)
                                             .++.++|+|||++......     .....++..|+|||++.+..++.++||||||++
T Consensus       158 -----------------------~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  214 (291)
T cd05094         158 -----------------------ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI  214 (291)
T ss_pred             -----------------------cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHH
Confidence                                   4667999999988653221     233456788999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          280 LVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       280 l~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      +|+|++ |..||...+..+....+....                          ++                       .
T Consensus       215 l~el~t~g~~p~~~~~~~~~~~~~~~~~--------------------------~~-----------------------~  245 (291)
T cd05094         215 LWEIFTYGKQPWFQLSNTEVIECITQGR--------------------------VL-----------------------E  245 (291)
T ss_pred             HHHHHhCCCCCCCCCCHHHHHHHHhCCC--------------------------CC-----------------------C
Confidence            999999 999997766555443322110                          00                       0


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ....++..+.+|+.+||+.||.+|||+.++++
T Consensus       246 ~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         246 RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            11235677899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=100.00  E-value=5e-39  Score=294.07  Aligned_cols=247  Identities=28%  Similarity=0.427  Sum_probs=198.2

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|.+..+|+.||+|.++...    .....+..|+++++.+.      |++++.+++.+...+
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~------~~~i~~~~~~~~~~~   75 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD------HPNVIKYLASFIENN   75 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCC------CCCeeeeeeeeecCC
Confidence            57999999999999999999999899999999886321    22455677888888775      589999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ..++||||+ +++|.+++...  ....+++..+..++.|++.||.|||+.||+|+||||+||+++               
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---------------  140 (267)
T cd08224          76 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---------------  140 (267)
T ss_pred             eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---------------
Confidence            999999999 89999998753  223589999999999999999999999999999999999993               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                               .++.++|+|||.+......   .....|+..|+|||.+.+..++.++|+|||||++|+|++|..||.....
T Consensus       141 ---------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~  211 (267)
T cd08224         141 ---------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM  211 (267)
T ss_pred             ---------CCCcEEEeccceeeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc
Confidence                     4667999999987653322   2345689999999999998999999999999999999999999965432


Q ss_pred             --HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          296 --LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       296 --~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                        .+....+....  .                        +                      ......++..+.++|.+
T Consensus       212 ~~~~~~~~~~~~~--~------------------------~----------------------~~~~~~~~~~~~~~i~~  243 (267)
T cd08224         212 NLYSLCKKIEKCD--Y------------------------P----------------------PLPADHYSEELRDLVSR  243 (267)
T ss_pred             cHHHHHhhhhcCC--C------------------------C----------------------CCChhhcCHHHHHHHHH
Confidence              11111111100  0                        0                      00112456778999999


Q ss_pred             ccccCCCCCCCHHHHhC
Q 015867          374 LLRYDPSERLTARQALN  390 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~  390 (399)
                      ||..||.+|||+.+|++
T Consensus       244 cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         244 CINPDPEKRPDISYVLQ  260 (267)
T ss_pred             HcCCCcccCCCHHHHHH
Confidence            99999999999999875

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=100.00  E-value=1.6e-39  Score=296.11  Aligned_cols=236  Identities=23%  Similarity=0.339  Sum_probs=188.8

Q ss_pred             eeccccceEEEEEEE--ccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           73 KMGEGTFGRVLECWD--RQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        73 ~lG~G~~g~V~~~~~--~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      .||+|+||.||+|.+  ..+++.+|+|+++...   .....+..|+.+++.+.      |+||+++++++. .+..++||
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~-~~~~~lv~   74 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLD------NPYIVRMIGICE-AESWMLVM   74 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCC------CCCcceEEEEEc-CCCcEEEE
Confidence            589999999999964  4568899999986432   23345667777777764      599999998875 45678999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ||+ +++|.+++....  .+++..+..++.|++.||+|||++||+||||||+||+++                       
T Consensus        75 e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~-----------------------  129 (257)
T cd05116          75 ELAELGPLNKFLQKNK--HVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV-----------------------  129 (257)
T ss_pred             ecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc-----------------------
Confidence            999 889999997655  589999999999999999999999999999999999994                       


Q ss_pred             CCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          227 PKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                       .++.++|+|||++.......      ....++..|+|||.+....++.++|+|||||++|||++ |..||...+..+..
T Consensus       130 -~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~  208 (257)
T cd05116         130 -TQHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVT  208 (257)
T ss_pred             -CCCeEEECCCccccccCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHH
Confidence             45679999999886543221      12234578999999988889999999999999999998 99999877666555


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.....                       .                          ..+..++.++.+||.+||+.||
T Consensus       209 ~~i~~~~~-----------------------~--------------------------~~~~~~~~~l~~li~~~~~~~p  239 (257)
T cd05116         209 QMIESGER-----------------------M--------------------------ECPQRCPPEMYDLMKLCWTYGV  239 (257)
T ss_pred             HHHHCCCC-----------------------C--------------------------CCCCCCCHHHHHHHHHHhccCc
Confidence            55432111                       0                          1113467788999999999999


Q ss_pred             CCCCCHHHHhC
Q 015867          380 SERLTARQALN  390 (399)
Q Consensus       380 ~~R~t~~ell~  390 (399)
                      .+||++.+|..
T Consensus       240 ~~Rp~~~~i~~  250 (257)
T cd05116         240 DERPGFAVVEL  250 (257)
T ss_pred             hhCcCHHHHHH
Confidence            99999998754

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.9e-39  Score=295.59  Aligned_cols=243  Identities=23%  Similarity=0.342  Sum_probs=192.1

Q ss_pred             eeeccccceEEEEEEEccCC---eEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQ---ERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~---~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      ++||+|+||.||+|....++   ..||+|.+.....  ....+..|+++++.+.      |+|++++++++. .+..++|
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~-~~~~~~v   73 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLD------HPCIVRLIGVCK-GEPLMLV   73 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcC------CCCeeeEEEEEc-CCceEEE
Confidence            46999999999999865544   7899999875433  3455667777777764      599999999776 4568999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|.+++.+..  .+++..+..++.|++.||.|||+.|++|+||||+|||++                      
T Consensus        74 ~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~----------------------  129 (257)
T cd05060          74 MELAPLGPLLKYLKKRR--EIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV----------------------  129 (257)
T ss_pred             EEeCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc----------------------
Confidence            9999 899999998766  689999999999999999999999999999999999994                      


Q ss_pred             CCCCCceEEeecCCcccCCCCCc------ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQNHS------SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEH  298 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~  298 (399)
                        .++.++|+|||.+........      ...++..|+|||.+.+..++.++||||||+++|+|++ |..||...+..+.
T Consensus       130 --~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~  207 (257)
T cd05060         130 --NRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEV  207 (257)
T ss_pred             --CCCcEEeccccccceeecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHH
Confidence              466799999998765322221      1123467999999998899999999999999999998 9999987665544


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.....                                                 ...+..++..+.++|.+||..|
T Consensus       208 ~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~li~~cl~~~  238 (257)
T cd05060         208 IAMLESGER-------------------------------------------------LPRPEECPQEIYSIMLSCWKYR  238 (257)
T ss_pred             HHHHHcCCc-------------------------------------------------CCCCCCCCHHHHHHHHHHhcCC
Confidence            443322100                                                 0112345678899999999999


Q ss_pred             CCCCCCHHHHhCCccccCCC
Q 015867          379 PSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~~  398 (399)
                      |.+|||+.++++  .|.++.
T Consensus       239 p~~Rp~~~~l~~--~l~~~~  256 (257)
T cd05060         239 PEDRPTFSELES--TFRRDP  256 (257)
T ss_pred             hhhCcCHHHHHH--HHHhcc
Confidence            999999999976  555443

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=100.00  E-value=3.6e-39  Score=302.58  Aligned_cols=248  Identities=19%  Similarity=0.295  Sum_probs=196.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-------cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-------QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-------~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      .++|.+.+.||+|+||.||+|.+.       .....+|+|.++...  .....+..|+++++.+.     .|+||+++++
T Consensus        11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~   85 (314)
T cd05099          11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIG-----KHKNIINLLG   85 (314)
T ss_pred             HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhcc-----CCCCeeeEEE
Confidence            357999999999999999999753       235579999986432  22344666777777663     3699999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNK--------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      ++...+..++||||+ +++|.+++....              ...+++..+..++.||+.||.|||++||+|+||||+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Ni  165 (314)
T cd05099          86 VCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNV  165 (314)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeE
Confidence            999999999999999 899999997642              12488889999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWS  275 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Diws  275 (399)
                      |++                        .++.++|+|||.+.......     ....++..|+|||++.+..++.++||||
T Consensus       166 ll~------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws  221 (314)
T cd05099         166 LVT------------------------EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWS  221 (314)
T ss_pred             EEc------------------------CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhH
Confidence            994                        45679999999886543211     1223456799999999989999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          276 VGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       276 lG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      ||+++|+|++ |..||...+..+....+.....                                               
T Consensus       222 lG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~-----------------------------------------------  254 (314)
T cd05099         222 FGILMWEIFTLGGSPYPGIPVEELFKLLREGHR-----------------------------------------------  254 (314)
T ss_pred             HHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-----------------------------------------------
Confidence            9999999999 8999987665554444322100                                               


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                        ...+..++.++.+||.+||..||.+|||+.++++
T Consensus       255 --~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         255 --MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             --CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence              0011345677899999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=100.00  E-value=1.6e-39  Score=295.54  Aligned_cols=242  Identities=22%  Similarity=0.323  Sum_probs=195.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.+.||+|+||.||++.  .+++.||+|.++... ....+..|+.+++.+.      |+|++++++++... ..++
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~--~~~~~~~iK~~~~~~-~~~~~~~e~~~l~~~~------~~~i~~~~~~~~~~-~~~~   75 (254)
T cd05083           6 QKLTLGEIIGEGEFGAVLQGE--YTGQKVAVKNIKCDV-TAQAFLEETAVMTKLH------HKNLVRLLGVILHN-GLYI   75 (254)
T ss_pred             HHceeeeeeccCCCCceEecc--cCCCceEEEeecCcc-hHHHHHHHHHHHHhCC------CCCcCeEEEEEcCC-CcEE
Confidence            469999999999999999985  467889999986532 3356677888887775      58999999988754 4799


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++.......+++..+..++.|++.||.|||+.|++||||||+||+++                     
T Consensus        76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---------------------  134 (254)
T cd05083          76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---------------------  134 (254)
T ss_pred             EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---------------------
Confidence            99999 89999999876655689999999999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME  303 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~  303 (399)
                         .++.++|+|||++............+..|+|||.+.+..++.++|+||||+++|+|++ |..||...+..+....+.
T Consensus       135 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  211 (254)
T cd05083         135 ---EDGVAKVSDFGLARVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVE  211 (254)
T ss_pred             ---CCCcEEECCCccceeccccCCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHh
Confidence               4567999999988654433333445678999999998899999999999999999998 999998766554433332


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      +...                                                 ......++..+.+|+.+||+.+|.+||
T Consensus       212 ~~~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp  242 (254)
T cd05083         212 KGYR-------------------------------------------------MEPPEGCPADVYVLMTSCWETEPKKRP  242 (254)
T ss_pred             CCCC-------------------------------------------------CCCCCcCCHHHHHHHHHHcCCChhhCc
Confidence            1100                                                 011134567889999999999999999


Q ss_pred             CHHHHhC
Q 015867          384 TARQALN  390 (399)
Q Consensus       384 t~~ell~  390 (399)
                      |++++++
T Consensus       243 ~~~~l~~  249 (254)
T cd05083         243 SFHKLRE  249 (254)
T ss_pred             CHHHHHH
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>PHA02882 putative serine/threonine kinase; Provisional

Probab=100.00  E-value=4.8e-39  Score=298.84  Aligned_cols=262  Identities=17%  Similarity=0.202  Sum_probs=188.8

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccC---CeEEEEEEEecchhhh-HH-----HHHHHHHHHHhhhcCCCCCccee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQT---QERVAIKVVRSIRKYR-DA-----AMIEIDVLQHLAKNDKGGSSHCV  131 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~-~~-----~~~e~~~l~~l~~~~~~~~~~iv  131 (399)
                      .+...++|++.+.||+|+||.||+|.+..+   +..+|+|+........ ..     ...+...+..+.......|++++
T Consensus         7 ~~i~~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~   86 (294)
T PHA02882          7 IDITGKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIP   86 (294)
T ss_pred             eccCCCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCC
Confidence            345567899999999999999999998777   6677888643221100 00     00111222223333445788999


Q ss_pred             eeceeeccCC----eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccc
Q 015867          132 QIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEF  207 (399)
Q Consensus       132 ~~~~~~~~~~----~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~  207 (399)
                      .+++.+....    ..+++|+++..++.+.+....  ..++..+..++.|++.||+|||+++|+||||||+|||++    
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~----  160 (294)
T PHA02882         87 KYYGCGSFKRCRMYYRFILLEKLVENTKEIFKRIK--CKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD----  160 (294)
T ss_pred             cEEEeeeEecCCceEEEEEEehhccCHHHHHHhhc--cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc----
Confidence            9887655432    558899998778888877644  468888999999999999999999999999999999993    


Q ss_pred             ccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCC----------CCCcccccCCCccchhhhhCCCCCCcchhHHHH
Q 015867          208 IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN----------QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVG  277 (399)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~----------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  277 (399)
                                          .++.++|+|||++....          .......||+.|+|||++.+..++.++||||||
T Consensus       161 --------------------~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG  220 (294)
T PHA02882        161 --------------------GNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLG  220 (294)
T ss_pred             --------------------CCCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHH
Confidence                                45679999999986532          112335799999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhh
Q 015867          278 CILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS  357 (399)
Q Consensus       278 ~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      |++|+|++|..||.+.............      .+.....+                                    ..
T Consensus       221 ~~l~el~~g~~P~~~~~~~~~~~~~~~~------~~~~~~~~------------------------------------~~  258 (294)
T PHA02882        221 YCMLKWAGIKLPWKGFGHNGNLIHAAKC------DFIKRLHE------------------------------------GK  258 (294)
T ss_pred             HHHHHHHhCCCCCCccccchHHHHHhHH------HHHHHhhh------------------------------------hh
Confidence            9999999999999876432221111110      00000000                                    00


Q ss_pred             ccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       358 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ...+.++.++.+++..|+..+|.+||++.++++
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        259 IKIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            112345677899999999999999999999875

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=6.1e-40  Score=309.43  Aligned_cols=210  Identities=26%  Similarity=0.334  Sum_probs=180.5

Q ss_pred             CCceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhh-hHHHHHHHHHHHHhhhcCCCCCccee
Q 015867           53 EGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY-RDAAMIEIDVLQHLAKNDKGGSSHCV  131 (399)
Q Consensus        53 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~~~~~~~~~~iv  131 (399)
                      ...+.+......+++|.-...||+|+||.||+|... ++..||||.+...... ..++..|++++..++      |+|+|
T Consensus        62 ~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~------H~Nlv  134 (361)
T KOG1187|consen   62 LRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQGEREFLNEVEILSRLR------HPNLV  134 (361)
T ss_pred             cceeeHHHHHHHHhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcchhHHHHHHHHHhcCC------CcCcc
Confidence            344566666667889999999999999999999765 4488999988765443 566999999998886      49999


Q ss_pred             eeceeeccCC-eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCCCcEEEeecc
Q 015867          132 QIRNWFDYRN-HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR---LIHTDLKPENILLVSSE  206 (399)
Q Consensus       132 ~~~~~~~~~~-~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g---ivH~Dikp~NIll~~~~  206 (399)
                      ++++|+.+.+ ..+||+||+ .|+|.+++.......++|....+|+.+++.||+|||...   |||||||++|||+    
T Consensus       135 ~LlGyC~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILL----  210 (361)
T KOG1187|consen  135 KLLGYCLEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILL----  210 (361)
T ss_pred             cEEEEEecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeE----
Confidence            9999999988 599999999 899999998755336899999999999999999999854   9999999999999    


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-CCcc--c-ccCCCccchhhhhCCCCCCcchhHHHHHHHHH
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSS--I-VSTRHYRAPEVILGLGWSYPCDMWSVGCILVE  282 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~--~-~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  282 (399)
                                          |.+..+||+|||+|..... ....  . .||.+|+|||++.....+.++|||||||+|.|
T Consensus       211 --------------------D~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllE  270 (361)
T KOG1187|consen  211 --------------------DEDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLE  270 (361)
T ss_pred             --------------------CCCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHH
Confidence                                5688999999999977654 3322  2 79999999999999899999999999999999


Q ss_pred             HHhCCCCCCCC
Q 015867          283 LCTGEALFQTH  293 (399)
Q Consensus       283 ll~g~~Pf~~~  293 (399)
                      +++|+.|.+..
T Consensus       271 litgr~~~d~~  281 (361)
T KOG1187|consen  271 LITGRKAVDQS  281 (361)
T ss_pred             HHhCCcccCCC
Confidence            99999888753

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=100.00  E-value=1.3e-39  Score=309.12  Aligned_cols=249  Identities=21%  Similarity=0.319  Sum_probs=192.6

Q ss_pred             CCEEEEeeeccccceEEEEEEE-----ccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWD-----RQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||+|+||.||+|.+     ..+++.||||+++...  .....+..|+.++..+.     +|+||+++++++.
T Consensus         7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~~~~~~~   81 (343)
T cd05103           7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-----HHLNVVNLLGACT   81 (343)
T ss_pred             hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhcc-----CCccHhhhcceee
Confidence            5799999999999999999974     3567899999996532  23345667888888875     3689999998776


Q ss_pred             c-CCeEEEEEccC-CCCHHHHHHhcCC-----------------------------------------------------
Q 015867          139 Y-RNHICIVFEKL-GPSLFDFLKRNKY-----------------------------------------------------  163 (399)
Q Consensus       139 ~-~~~~~lv~e~~-~~~L~~~l~~~~~-----------------------------------------------------  163 (399)
                      . ....++||||+ +++|.+++.....                                                     
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (343)
T cd05103          82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV  161 (343)
T ss_pred             cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence            5 45789999999 9999999875321                                                     


Q ss_pred             ------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCc
Q 015867          164 ------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA  231 (399)
Q Consensus       164 ------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (399)
                                  ..+++..+..++.||+.||+|||++||+||||||+|||++                        .++.
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~------------------------~~~~  217 (343)
T cd05103         162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS------------------------ENNV  217 (343)
T ss_pred             hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc------------------------CCCc
Confidence                        1367788889999999999999999999999999999993                        4667


Q ss_pred             eEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHH
Q 015867          232 IKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERA  305 (399)
Q Consensus       232 ~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~  305 (399)
                      ++|+|||++......     .....++..|+|||++.+..++.++||||||+++|+|++ |..||...............
T Consensus       218 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  297 (343)
T cd05103         218 VKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE  297 (343)
T ss_pred             EEEEecccccccccCcchhhcCCCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhc
Confidence            999999987653221     122345678999999999999999999999999999997 99999765432222111110


Q ss_pred             hCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCH
Q 015867          306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA  385 (399)
Q Consensus       306 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  385 (399)
                      ..                      ..                          ..+...+.++.+++.+||+.||.+|||+
T Consensus       298 ~~----------------------~~--------------------------~~~~~~~~~~~~~~~~cl~~~p~~Rps~  329 (343)
T cd05103         298 GT----------------------RM--------------------------RAPDYTTPEMYQTMLDCWHGEPSQRPTF  329 (343)
T ss_pred             cC----------------------CC--------------------------CCCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            00                      00                          0011245678899999999999999999


Q ss_pred             HHHhCC
Q 015867          386 RQALNH  391 (399)
Q Consensus       386 ~ell~h  391 (399)
                      .|+++|
T Consensus       330 ~eil~~  335 (343)
T cd05103         330 SELVEH  335 (343)
T ss_pred             HHHHHH
Confidence            999986

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=1.8e-39  Score=300.03  Aligned_cols=262  Identities=25%  Similarity=0.326  Sum_probs=194.5

Q ss_pred             CCE-EEEeeeccccceEEEEEE----EccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRY-KILSKMGEGTFGRVLECW----DRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y-~~~~~lG~G~~g~V~~~~----~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++| ++++.||+|+||+||++.    ...++..||+|+++...  .....+..|+++++.+.      |+||+++++++.
T Consensus         3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~   76 (283)
T cd05080           3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLY------HENIVKYKGCCS   76 (283)
T ss_pred             hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCC------CCCEeeEEEEEe
Confidence            456 999999999999998764    34568889999986532  23455677888888775      599999999876


Q ss_pred             c--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          139 Y--RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       139 ~--~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      .  ....++||||+ +++|.+++....   +++..+..++.|++.||.|||++||+|+||||+|||++            
T Consensus        77 ~~~~~~~~lv~e~~~~~~l~~~~~~~~---l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~------------  141 (283)
T cd05080          77 EQGGKGLQLIMEYVPLGSLRDYLPKHK---LNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD------------  141 (283)
T ss_pred             cCCCceEEEEecCCCCCCHHHHHHHcC---CCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc------------
Confidence            5  34689999999 999999997653   99999999999999999999999999999999999993            


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                  .++.++|+|||++.......      ....++..|+|||.+.+..++.++||||||+++|+|++|..|
T Consensus       142 ------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p  209 (283)
T cd05080         142 ------------NDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDS  209 (283)
T ss_pred             ------------CCCcEEEeecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCC
Confidence                        46679999999887543221      122456679999999988899999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHH-hCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          290 FQTHENLEHLAMMERA-LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      |......-  ..+... .+.....                             ......  ..  ......+..++.++.
T Consensus       210 ~~~~~~~~--~~~~~~~~~~~~~~-----------------------------~~~~~~--~~--~~~~~~~~~~~~~~~  254 (283)
T cd05080         210 KQSPPKKF--EEMIGPKQGQMTVV-----------------------------RLIELL--ER--GMRLPCPKNCPQEVY  254 (283)
T ss_pred             CCCCcchh--hhhhcccccccchh-----------------------------hhhhhh--hc--CCCCCCCCCCCHHHH
Confidence            86533210  000000 0000000                             000000  00  000111245678899


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +|+.+||+.||++|||++++++  +|+++
T Consensus       255 ~li~~cl~~~p~~Rps~~~i~~--~l~~~  281 (283)
T cd05080         255 ILMKNCWETEAKFRPTFRSLIP--ILKEM  281 (283)
T ss_pred             HHHHHHhccChhhCCCHHHHHH--HHHHh
Confidence            9999999999999999999986  55444

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=100.00  E-value=8.4e-40  Score=302.13  Aligned_cols=246  Identities=18%  Similarity=0.244  Sum_probs=195.9

Q ss_pred             CEEEEeeeccccceEEEEEEEcc-----CCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQ-----TQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      +|++.+.||+|+||.||+|.+..     .++.||||+++....  ....+..|..++..+.      |+||+++++++..
T Consensus         6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~------h~~iv~~~~~~~~   79 (283)
T cd05091           6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQ------HPNIVCLLGVVTK   79 (283)
T ss_pred             HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCC------CCCcCeEEEEEcC
Confidence            58888999999999999998654     357899999864322  2344556777766654      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEee
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNK--------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVS  204 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~  204 (399)
                      .+..++++||+ +++|.+++....              ...+++..+..++.|++.||.|||++||+||||||+|||+. 
T Consensus        80 ~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~-  158 (283)
T cd05091          80 EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF-  158 (283)
T ss_pred             CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec-
Confidence            99999999999 899999985321              12478888999999999999999999999999999999994 


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHH
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  279 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  279 (399)
                                             .++.+||+|||++......     .....+++.|+|||++.+..++.++|||||||+
T Consensus       159 -----------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~  215 (283)
T cd05091         159 -----------------------DKLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVV  215 (283)
T ss_pred             -----------------------CCCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHH
Confidence                                   3566999999987643221     123345788999999998889999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          280 LVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       280 l~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      +|||++ |..||.+....+....+......                                                 .
T Consensus       216 l~el~~~g~~p~~~~~~~~~~~~i~~~~~~-------------------------------------------------~  246 (283)
T cd05091         216 LWEVFSYGLQPYCGYSNQDVIEMIRNRQVL-------------------------------------------------P  246 (283)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcCCcC-------------------------------------------------C
Confidence            999998 88999877666555544332110                                                 1


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      .+..++..+.+|+.+||+.||.+||+++++++.
T Consensus       247 ~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~  279 (283)
T cd05091         247 CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSR  279 (283)
T ss_pred             CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHH
Confidence            123567778999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=100.00  E-value=2.2e-39  Score=299.08  Aligned_cols=247  Identities=21%  Similarity=0.321  Sum_probs=197.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+|.+.++||+|+||.||++...     .++..+|+|.+.... .....+..|+++++.+.      |+||+++++++.
T Consensus         4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~   77 (280)
T cd05092           4 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQ------HQHIVRFYGVCT   77 (280)
T ss_pred             hHhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCC------CCCCceEEEEEe
Confidence            356899999999999999999642     356789999876432 33455777888887775      589999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEee
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY-------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVS  204 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~  204 (399)
                      ..+..++||||+ +++|.+++...+.             ..+++..+..++.||+.||+|||+.|++|+||||+|||++ 
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~-  156 (280)
T cd05092          78 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG-  156 (280)
T ss_pred             cCCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc-
Confidence            999999999999 8999999976532             2488899999999999999999999999999999999994 


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHH
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  279 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  279 (399)
                                             .++.++|+|||++......     .....+++.|+|||++.+..++.++|||||||+
T Consensus       157 -----------------------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  213 (280)
T cd05092         157 -----------------------QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVV  213 (280)
T ss_pred             -----------------------CCCCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHH
Confidence                                   4667999999987643221     122345678999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          280 LVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       280 l~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      +|+|++ |.+||......+....+.....                                                 ..
T Consensus       214 l~el~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~~  244 (280)
T cd05092         214 LWEIFTYGKQPWYQLSNTEAIECITQGRE-------------------------------------------------LE  244 (280)
T ss_pred             HHHHHcCCCCCCccCCHHHHHHHHHcCcc-------------------------------------------------CC
Confidence            999998 9999977665554433322110                                                 01


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      .+..++..+.+||.+||+.||.+||++.++++
T Consensus       245 ~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         245 RPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             CCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            11245677899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=100.00  E-value=3.7e-39  Score=297.37  Aligned_cols=244  Identities=18%  Similarity=0.229  Sum_probs=187.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCe----EEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQE----RVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ++|++.+.||+|+||+||+|.+..+++    .+++|.+.....  ....+..|+.++..      ..|+||+++++++. 
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~------l~h~~iv~~~~~~~-   79 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGS------LDHAYIVRLLGICP-   79 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhc------CCCCCcceEEEEEC-
Confidence            469999999999999999999877765    467777643211  11233334444443      35799999999875 


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ....++|+||+ +++|.+++..... .+++..+..++.||+.||.|||++|++|+||||+|||+                
T Consensus        80 ~~~~~~i~e~~~~gsL~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili----------------  142 (279)
T cd05111          80 GASLQLVTQLSPLGSLLDHVRQHRD-SLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILL----------------  142 (279)
T ss_pred             CCccEEEEEeCCCCcHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEE----------------
Confidence            45578899999 9999999976543 58999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT  292 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~  292 (399)
                              +.++.+||+|||.+......     .....++..|+|||.+.+..++.++||||||+++||+++ |..||.+
T Consensus       143 --------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~  214 (279)
T cd05111         143 --------KSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAG  214 (279)
T ss_pred             --------cCCCcEEEcCCccceeccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCC
Confidence                    34677999999988653221     123456778999999998899999999999999999998 9999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .........+...... +                                                .+..++.++.+++.
T Consensus       215 ~~~~~~~~~~~~~~~~-~------------------------------------------------~~~~~~~~~~~li~  245 (279)
T cd05111         215 MRPHEVPDLLEKGERL-A------------------------------------------------QPQICTIDVYMVMV  245 (279)
T ss_pred             CCHHHHHHHHHCCCcC-C------------------------------------------------CCCCCCHHHHHHHH
Confidence            6554433222111100 0                                                01123456789999


Q ss_pred             HccccCCCCCCCHHHHhC
Q 015867          373 GLLRYDPSERLTARQALN  390 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~  390 (399)
                      +||..||.+|||+.|+++
T Consensus       246 ~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         246 KCWMIDENVRPTFKELAN  263 (279)
T ss_pred             HHcCCCcccCcCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=100.00  E-value=3.3e-39  Score=301.38  Aligned_cols=249  Identities=18%  Similarity=0.281  Sum_probs=198.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-------cCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-------QTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-------~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      .++|.+.+.||+|+||.||+|+..       ..+..||+|.+...  ......+..|+.+++.+.     .|+||+++++
T Consensus        14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~~~   88 (304)
T cd05101          14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINLLG   88 (304)
T ss_pred             HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhc-----cCCCchheeE
Confidence            457999999999999999999742       23557999998642  233355777888888773     3699999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNKY--------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      ++......++||||+ +++|.+++.+...              ..++...+..++.||+.||.|||++||+||||||+||
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  168 (304)
T cd05101          89 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNV  168 (304)
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceE
Confidence            999999999999999 8899999976421              2477888999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWS  275 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diws  275 (399)
                      |++                        .++.++|+|||.+......     .....++..|+|||++.+..++.++||||
T Consensus       169 li~------------------------~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  224 (304)
T cd05101         169 LVT------------------------ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS  224 (304)
T ss_pred             EEc------------------------CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHH
Confidence            994                        4567999999988654321     12234567899999999889999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          276 VGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       276 lG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      ||+++|+|++ |..||.+.+..+....+......                                              
T Consensus       225 lG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~----------------------------------------------  258 (304)
T cd05101         225 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM----------------------------------------------  258 (304)
T ss_pred             HHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC----------------------------------------------
Confidence            9999999998 88999876665554443221100                                              


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                         ..+..++.++.+||.+||+.+|.+|||+.|+++.
T Consensus       259 ---~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         259 ---DKPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             ---CCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence               0113457788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=100.00  E-value=6e-39  Score=294.02  Aligned_cols=245  Identities=20%  Similarity=0.309  Sum_probs=195.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCe---EEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQE---RVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .+|+..+.||+|+||.||+|.+..+++   .+|+|.+...  ......+..|++++..+.      |+|++++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~   78 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFS------HHNIIRLEGVVTKF   78 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCC------CCCeeEEEEEEccC
Confidence            468999999999999999999865554   7999988643  223345666777776664      58999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++.... ..+++..+..++.|++.||+|||+.|++|+||||+||+++                
T Consensus        79 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~----------------  141 (268)
T cd05063          79 KPAMIITEYMENGALDKYLRDHD-GEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN----------------  141 (268)
T ss_pred             CCcEEEEEcCCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc----------------
Confidence            9999999999 889999997643 2589999999999999999999999999999999999993                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCCc------ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHS------SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT  292 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~  292 (399)
                              .++.++|+|||++........      ....+..|+|||++.+..++.++|+|||||++|+|++ |..||..
T Consensus       142 --------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~  213 (268)
T cd05063         142 --------SNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWD  213 (268)
T ss_pred             --------CCCcEEECCCccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCc
Confidence                    466799999998764322111      1123457999999998889999999999999999997 9999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....+.... ..|                                                ....++.++.+|+.
T Consensus       214 ~~~~~~~~~i~~~~-~~~------------------------------------------------~~~~~~~~~~~li~  244 (268)
T cd05063         214 MSNHEVMKAINDGF-RLP------------------------------------------------APMDCPSAVYQLML  244 (268)
T ss_pred             CCHHHHHHHHhcCC-CCC------------------------------------------------CCCCCCHHHHHHHH
Confidence            66655554443211 000                                                01234667899999


Q ss_pred             HccccCCCCCCCHHHHhC
Q 015867          373 GLLRYDPSERLTARQALN  390 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~  390 (399)
                      +||+.||.+||++.++++
T Consensus       245 ~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         245 QCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             HHcCCCcccCcCHHHHHH
Confidence            999999999999999976

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.5e-39  Score=296.05  Aligned_cols=245  Identities=20%  Similarity=0.262  Sum_probs=191.5

Q ss_pred             EEEEeeeccccceEEEEEEEcc---CCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           68 YKILSKMGEGTFGRVLECWDRQ---TQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      |++.+.||+|+||.||.|....   ++..||+|.++...   .....+..|+++++.+.      |+||+++++++....
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~   74 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFD------HPNVMKLIGVCFEAS   74 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCC------CCCeeeEEeeeccCC
Confidence            5688999999999999998754   34789999986432   22345666777777764      599999998776544


Q ss_pred             ------eEEEEEccC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccC
Q 015867          142 ------HICIVFEKL-GPSLFDFLKRN----KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       142 ------~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~  210 (399)
                            ..++||||+ +++|..++...    ....+++..+..++.|++.||.|||+.|++||||||+||+++       
T Consensus        75 ~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~-------  147 (273)
T cd05035          75 SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR-------  147 (273)
T ss_pred             ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC-------
Confidence                  479999999 99999988543    223589999999999999999999999999999999999993       


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  285 (399)
                                       .++.++|+|||++.......     ....++..|+|||.+.+..++.++|||||||++|||++
T Consensus       148 -----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~  210 (273)
T cd05035         148 -----------------EDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIAT  210 (273)
T ss_pred             -----------------CCCeEEECCccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHh
Confidence                             46679999999876532211     12234678999999988899999999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          286 -GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       286 -g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                       |..||.+.+..+....+.....                                                 ...+..++
T Consensus       211 ~g~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~  241 (273)
T cd05035         211 RGQTPYPGVENHEIYDYLRHGNR-------------------------------------------------LKQPEDCL  241 (273)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCC-------------------------------------------------CCCCcCCC
Confidence             9999987665554433322100                                                 01113456


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      .++.++|.+||+.||.+|||+.|++.+
T Consensus       242 ~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         242 DELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            788999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=100.00  E-value=4.3e-39  Score=295.16  Aligned_cols=245  Identities=23%  Similarity=0.334  Sum_probs=196.8

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCe---EEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQE---RVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ..|++.+.||+|+||.||+|.+..+++   .||||.+...  ......+..|+.+++.+.      |+||+++++++..+
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~~~   77 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD------HPNIIHLEGVVTKS   77 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCC------CcCcceEEEEECCC
Confidence            459999999999999999999876654   6999998643  233456777888887775      59999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++..... .+++..+..++.|++.||.|||++|++|+||||+||++                 
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili-----------------  139 (269)
T cd05065          78 RPVMIITEFMENGALDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILV-----------------  139 (269)
T ss_pred             CceEEEEecCCCCcHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEE-----------------
Confidence            9999999999 8899999976543 58999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCCc------cccc--CCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHS------SIVS--TRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALF  290 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~g--t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf  290 (399)
                             +.+..++|+|||++........      ...|  +..|+|||++.+..++.++|||||||++||+++ |..||
T Consensus       140 -------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~  212 (269)
T cd05065         140 -------NSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPY  212 (269)
T ss_pred             -------cCCCcEEECCCccccccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCC
Confidence                   3466799999998765322111      1111  357999999999999999999999999999886 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      ...+..+....+.....                         +                        ..+..++..+.++
T Consensus       213 ~~~~~~~~~~~i~~~~~-------------------------~------------------------~~~~~~~~~~~~l  243 (269)
T cd05065         213 WDMSNQDVINAIEQDYR-------------------------L------------------------PPPMDCPTALHQL  243 (269)
T ss_pred             CCCCHHHHHHHHHcCCc-------------------------C------------------------CCcccCCHHHHHH
Confidence            87666555444422110                         0                        0112456678899


Q ss_pred             HHHccccCCCCCCCHHHHhC
Q 015867          371 LHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~  390 (399)
                      +.+||..||.+||++.++++
T Consensus       244 i~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         244 MLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=100.00  E-value=3.6e-39  Score=296.07  Aligned_cols=244  Identities=18%  Similarity=0.257  Sum_probs=189.6

Q ss_pred             EEEeeeccccceEEEEEEEccCCe--EEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc----
Q 015867           69 KILSKMGEGTFGRVLECWDRQTQE--RVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY----  139 (399)
Q Consensus        69 ~~~~~lG~G~~g~V~~~~~~~~~~--~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~----  139 (399)
                      .+.+.||+|+||.||+|.+..++.  .+|+|.++..   ......+..|.++++.+.      |+||+++++.+..    
T Consensus         2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~   75 (272)
T cd05075           2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFD------HPNVMRLIGVCLQTVES   75 (272)
T ss_pred             ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEccCCcc
Confidence            467889999999999999877664  6999988643   233345666777877774      5999999986532    


Q ss_pred             --CCeEEEEEccC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          140 --RNHICIVFEKL-GPSLFDFLKRN----KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       140 --~~~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                        ....++||||+ +++|.+++...    ....+++..+..++.||+.||+|||++||+||||||+|||+          
T Consensus        76 ~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~----------  145 (272)
T cd05075          76 EGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCML----------  145 (272)
T ss_pred             cCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEE----------
Confidence              23579999999 89999987432    12348899999999999999999999999999999999999          


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-C
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-G  286 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g  286 (399)
                                    +.++.++|+|||++.......     ....+++.|+|||.+.+..++.++||||||+++|+|++ |
T Consensus       146 --------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g  211 (272)
T cd05075         146 --------------NENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRG  211 (272)
T ss_pred             --------------cCCCCEEECCCCcccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCC
Confidence                          346779999999987543221     22345678999999999999999999999999999999 8


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       287 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      ..||.+....+....+.....                                                 ....+.++..
T Consensus       212 ~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~  242 (272)
T cd05075         212 QTPYPGVENSEIYDYLRQGNR-------------------------------------------------LKQPPDCLDG  242 (272)
T ss_pred             CCCCCCCCHHHHHHHHHcCCC-------------------------------------------------CCCCCCCCHH
Confidence            999987665544433322100                                                 0011245667


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCC
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      +.++|.+||+.||.+|||+.+++++
T Consensus       243 ~~~li~~~l~~~p~~Rps~~~l~~~  267 (272)
T cd05075         243 LYSLMSSCWLLNPKDRPSFETLRCE  267 (272)
T ss_pred             HHHHHHHHcCCCcccCcCHHHHHHH
Confidence            8999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=100.00  E-value=4.7e-39  Score=292.51  Aligned_cols=243  Identities=22%  Similarity=0.347  Sum_probs=198.9

Q ss_pred             EEEeeeccccceEEEEEEEccCC----eEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           69 KILSKMGEGTFGRVLECWDRQTQ----ERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        69 ~~~~~lG~G~~g~V~~~~~~~~~----~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++.+.||.|+||.||++.+...+    ..||+|++.....  ....+..|+.+++.+.      |+||+++++++.+.+.
T Consensus         2 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~   75 (258)
T smart00219        2 TLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLD------HPNIVKLLGVCTEEEP   75 (258)
T ss_pred             cccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcC------CCchheEEEEEcCCCe
Confidence            56789999999999999988766    8999999965432  3456777888887774      5899999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|.+++.......+++..+..++.|++.||++||+.|++|+||||+||+++                  
T Consensus        76 ~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~------------------  137 (258)
T smart00219       76 LMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG------------------  137 (258)
T ss_pred             eEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc------------------
Confidence            99999999 89999999876543389999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCCc----ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNHS----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENL  296 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~  296 (399)
                            .++.++|+|||.+........    ...++..|+|||.+.+..++.++|+||||+++|+|++ |.+||...+..
T Consensus       138 ------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~  211 (258)
T smart00219      138 ------ENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNE  211 (258)
T ss_pred             ------cCCeEEEcccCCceecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                  456799999998865433211    1236789999999988889999999999999999998 89999876665


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....+......                                                 ..+..++.++.+++.+||.
T Consensus       212 ~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~i~~~l~  242 (258)
T smart00219      212 EVLEYLKKGYRL-------------------------------------------------PKPENCPPEIYKLMLQCWA  242 (258)
T ss_pred             HHHHHHhcCCCC-------------------------------------------------CCCCcCCHHHHHHHHHHCc
Confidence            555444321100                                                 0112357788999999999


Q ss_pred             cCCCCCCCHHHHhC
Q 015867          377 YDPSERLTARQALN  390 (399)
Q Consensus       377 ~dP~~R~t~~ell~  390 (399)
                      .||.+|||+.++++
T Consensus       243 ~~p~~Rpt~~~ll~  256 (258)
T smart00219      243 EDPEDRPTFSELVE  256 (258)
T ss_pred             CChhhCcCHHHHHh
Confidence            99999999999986

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=3.8e-39  Score=299.70  Aligned_cols=253  Identities=21%  Similarity=0.295  Sum_probs=195.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccC--------------CeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQT--------------QERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSH  129 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~--------------~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~  129 (399)
                      .+|++.+.||+|+||.||+|++..+              ...||+|.++..  ......+..|+++++.+.      |+|
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~------h~~   78 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLK------NPN   78 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCC------CCC
Confidence            4799999999999999999987543              235999998653  223345777888888875      599


Q ss_pred             eeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCC----------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 015867          130 CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY----------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPE  198 (399)
Q Consensus       130 iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~----------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~  198 (399)
                      ++++++++...+..++||||+ +++|.+++.....          ..+++..+..++.|++.||+|||++|++|+||||+
T Consensus        79 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~  158 (295)
T cd05097          79 IIRLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATR  158 (295)
T ss_pred             cCeEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChh
Confidence            999999999999999999999 8999999865321          13688889999999999999999999999999999


Q ss_pred             cEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchh
Q 015867          199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDM  273 (399)
Q Consensus       199 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di  273 (399)
                      ||+++                        .++.+||+|||++......     .....++..|+|||++.+..++.++|+
T Consensus       159 Nill~------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv  214 (295)
T cd05097         159 NCLVG------------------------NHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDV  214 (295)
T ss_pred             hEEEc------------------------CCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhH
Confidence            99994                        4567999999987643221     122345678999999998899999999


Q ss_pred             HHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhh
Q 015867          274 WSVGCILVELCT--GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR  351 (399)
Q Consensus       274 wslG~il~ell~--g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  351 (399)
                      |||||++|+|++  |..||...+..+....+........                   ..                    
T Consensus       215 wSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-------------------~~--------------------  255 (295)
T cd05097         215 WAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQG-------------------RQ--------------------  255 (295)
T ss_pred             HHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhcc-------------------cc--------------------
Confidence            999999999998  6788887666554444322110000                   00                    


Q ss_pred             hhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                         ......+.++..+.+||.+||+.||.+|||+.++++
T Consensus       256 ---~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         256 ---IYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             ---ccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence               000112345678899999999999999999999965

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=100.00  E-value=1e-39  Score=297.85  Aligned_cols=243  Identities=26%  Similarity=0.412  Sum_probs=193.6

Q ss_pred             EEEeeeccccceEEEEEEEc----cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           69 KILSKMGEGTFGRVLECWDR----QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        69 ~~~~~lG~G~~g~V~~~~~~----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++.+.||.|.||.||+|...    ..+..|+||.++...  .....+..|+++++.++      |+||+++++++...+.
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~g~~~~~~~   75 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLR------HPNIVKLYGFCIENEP   75 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHS------BTTBE-EEEEEESSSS
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccc------cccccccccccccccc
Confidence            57889999999999999987    457789999996432  23567777888888775      5999999999998888


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|.+++.......++......|+.||+.||.|||+++++|+||+++|||++                  
T Consensus        76 ~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~------------------  137 (259)
T PF07714_consen   76 LFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLD------------------  137 (259)
T ss_dssp             EEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEE------------------
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc------------------
Confidence            99999999 89999999987444699999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCc
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHEN  295 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~  295 (399)
                            .++.+||+|||++.......     ....+...|+|||.+.+..++.++||||||+++||+++ |..||...+.
T Consensus       138 ------~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~  211 (259)
T PF07714_consen  138 ------SNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN  211 (259)
T ss_dssp             ------TTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH
T ss_pred             ------cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence                  46689999999876652211     22346778999999999889999999999999999999 7899988777


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+....+.....                                                 ...+..++..+.++|.+||
T Consensus       212 ~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~li~~C~  242 (259)
T PF07714_consen  212 EEIIEKLKQGQR-------------------------------------------------LPIPDNCPKDIYSLIQQCW  242 (259)
T ss_dssp             HHHHHHHHTTEE-------------------------------------------------TTSBTTSBHHHHHHHHHHT
T ss_pred             cccccccccccc-------------------------------------------------ceeccchhHHHHHHHHHHc
Confidence            665555533211                                                 1112456788899999999


Q ss_pred             ccCCCCCCCHHHHhC
Q 015867          376 RYDPSERLTARQALN  390 (399)
Q Consensus       376 ~~dP~~R~t~~ell~  390 (399)
                      ..||.+|||+.++++
T Consensus       243 ~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  243 SHDPEKRPSFQEILQ  257 (259)
T ss_dssp             -SSGGGS--HHHHHH
T ss_pred             CCChhhCcCHHHHHh
Confidence            999999999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=100.00  E-value=4.6e-39  Score=294.76  Aligned_cols=245  Identities=23%  Similarity=0.319  Sum_probs=196.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCC---eEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQ---ERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~---~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .+|++.+.||+|+||.||+|.+..++   ..+|+|.++..  ......+..|+.+++.+.      ||||+++++++..+
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~   77 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFD------HPNIIHLEGVVTKS   77 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEecC
Confidence            47999999999999999999876443   47999988642  223345677777777764      59999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++.+... .++...+..++.|++.||.|||++|++|+||||+|||+                 
T Consensus        78 ~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili-----------------  139 (267)
T cd05066          78 KPVMIVTEYMENGSLDAFLRKHDG-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILV-----------------  139 (267)
T ss_pred             CccEEEEEcCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEE-----------------
Confidence            9999999999 8999999987543 58999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCCc------ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHS------SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT  292 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~  292 (399)
                             +.++.++|+|||.+........      ...++..|+|||.+.+..++.++|+||||+++|++++ |..||..
T Consensus       140 -------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~  212 (267)
T cd05066         140 -------NSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWE  212 (267)
T ss_pred             -------CCCCeEEeCCCCcccccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCccc
Confidence                   3466799999998865432211      1123567999999998899999999999999999886 9999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....+..... +                                                .....++..+.+++.
T Consensus       213 ~~~~~~~~~~~~~~~-~------------------------------------------------~~~~~~~~~~~~li~  243 (267)
T cd05066         213 MSNQDVIKAIEEGYR-L------------------------------------------------PAPMDCPAALHQLML  243 (267)
T ss_pred             CCHHHHHHHHhCCCc-C------------------------------------------------CCCCCCCHHHHHHHH
Confidence            666554444432110 0                                                001234677899999


Q ss_pred             HccccCCCCCCCHHHHhC
Q 015867          373 GLLRYDPSERLTARQALN  390 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~  390 (399)
                      +||+.+|.+||++.++++
T Consensus       244 ~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         244 DCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             HHcccCchhCCCHHHHHH
Confidence            999999999999999875

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-41  Score=342.20  Aligned_cols=251  Identities=33%  Similarity=0.453  Sum_probs=208.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .-+|+-...||.|.||.||-|.+..+|...|+|-++...   +..+....|..++..+.      |||+|+.++.-.+.+
T Consensus      1234 ~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~ln------HpNlV~YyGVEvHRe 1307 (1509)
T KOG4645|consen 1234 TFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLN------HPNLVRYYGVEVHRE 1307 (1509)
T ss_pred             eeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhcc------CccccccCceeecHH
Confidence            347888899999999999999999999999999875422   33345667888888876      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..+|.|||| ||+|.++++..+  ..++...+.+..|++.||.|||++|||||||||.|||++                 
T Consensus      1308 kv~IFMEyC~~GsLa~ll~~gr--i~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld----------------- 1368 (1509)
T KOG4645|consen 1308 KVYIFMEYCEGGSLASLLEHGR--IEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLD----------------- 1368 (1509)
T ss_pred             HHHHHHHHhccCcHHHHHHhcc--hhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeee-----------------
Confidence            999999999 999999998876  588888999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCC-------cccccCCCccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNH-------SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                             .++.+|++|||.|.......       ....||+.|||||++.+.   +...++|||||||++.||+||+.||
T Consensus      1369 -------~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW 1441 (1509)
T KOG4645|consen 1369 -------FNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPW 1441 (1509)
T ss_pred             -------cCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCch
Confidence                   46689999999987643332       456899999999999864   5778999999999999999999999


Q ss_pred             CCCCcHH-HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          291 QTHENLE-HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       291 ~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      ...++.= +...+..+..  |                     +.                          +.++|.+.+|
T Consensus      1442 ~~~dne~aIMy~V~~gh~--P---------------------q~--------------------------P~~ls~~g~d 1472 (1509)
T KOG4645|consen 1442 AELDNEWAIMYHVAAGHK--P---------------------QI--------------------------PERLSSEGRD 1472 (1509)
T ss_pred             hhccchhHHHhHHhccCC--C---------------------CC--------------------------chhhhHhHHH
Confidence            8755432 2222222211  1                     11                          2357888899


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ||.+||+.||.+|+++.||++|-|=+.
T Consensus      1473 Fle~Cl~~dP~~Rw~~~qlle~~f~~~ 1499 (1509)
T KOG4645|consen 1473 FLEHCLEQDPKMRWTASQLLEHAFGKS 1499 (1509)
T ss_pred             HHHHHHhcCchhhhHHHHHHHhhcccc
Confidence            999999999999999999999998664

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=100.00  E-value=5.2e-39  Score=304.08  Aligned_cols=249  Identities=18%  Similarity=0.282  Sum_probs=197.1

Q ss_pred             CCCEEEEeeeccccceEEEEEEEcc-------CCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQ-------TQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~-------~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      ..+|++.+.||+|+||.||+|++..       .+..||+|+++..  ......+..|+++++.+.     +|+||+++++
T Consensus        11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~   85 (334)
T cd05100          11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIG-----KHKNIINLLG   85 (334)
T ss_pred             HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhc-----CCCCeeeeeE
Confidence            3479999999999999999997643       2346899988642  223456777888888774     3699999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNK--------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      ++...+..++||||+ +++|.+++.+..              ...++...+..++.||+.||.|||++||+||||||+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  165 (334)
T cd05100          86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV  165 (334)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence            999999999999999 889999997642              12477888899999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWS  275 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Diws  275 (399)
                      |++                        .++.++|+|||++.......     ....++..|+|||++.+..++.++||||
T Consensus       166 ll~------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  221 (334)
T cd05100         166 LVT------------------------EDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS  221 (334)
T ss_pred             EEc------------------------CCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHH
Confidence            994                        45679999999876533221     1223456799999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          276 VGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       276 lG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      ||+++|+|++ |..||.+.+..+....+.....                                               
T Consensus       222 lG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~-----------------------------------------------  254 (334)
T cd05100         222 FGVLLWEIFTLGGSPYPGIPVEELFKLLKEGHR-----------------------------------------------  254 (334)
T ss_pred             HHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-----------------------------------------------
Confidence            9999999998 8999987665554443322100                                               


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                        ...+..++.++.+||.+||+.+|.+|||+.|++++
T Consensus       255 --~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         255 --MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             --CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence              00112456778999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=100.00  E-value=4.8e-39  Score=309.90  Aligned_cols=249  Identities=22%  Similarity=0.293  Sum_probs=196.8

Q ss_pred             CCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|.+.+.||+|+||.||+|++.     .+++.||||+++...  .....+..|++++..+.     +|+||+++++++.
T Consensus        37 ~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~-----~H~niv~~~~~~~  111 (401)
T cd05107          37 DNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLG-----PHLNIVNLLGACT  111 (401)
T ss_pred             HHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcC-----CCCCeEEEEEEEc
Confidence            46889999999999999999853     356789999997532  22345667888888775     3699999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC------------------------------------------------------
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY------------------------------------------------------  163 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~------------------------------------------------------  163 (399)
                      ..+..++||||+ +|+|.+++...+.                                                      
T Consensus       112 ~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  191 (401)
T cd05107         112 KGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVP  191 (401)
T ss_pred             cCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccc
Confidence            999999999999 9999999975421                                                      


Q ss_pred             ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEE
Q 015867          164 ------------------------------------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENIL  201 (399)
Q Consensus       164 ------------------------------------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIl  201 (399)
                                                                ..+++..+..++.||+.||+|||+.||+||||||+|||
T Consensus       192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiL  271 (401)
T cd05107         192 MQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVL  271 (401)
T ss_pred             hhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEE
Confidence                                                      13567778899999999999999999999999999999


Q ss_pred             EeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCCCCcchhHHH
Q 015867          202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYPCDMWSV  276 (399)
Q Consensus       202 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  276 (399)
                      ++                        .++.++|+|||++.....     ......++..|+|||++.+..++.++|||||
T Consensus       272 l~------------------------~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dvwsl  327 (401)
T cd05107         272 IC------------------------EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSF  327 (401)
T ss_pred             Ee------------------------CCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHH
Confidence            94                        356799999999865321     1223457788999999998899999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhh
Q 015867          277 GCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM  355 (399)
Q Consensus       277 G~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  355 (399)
                      |+++|||++ |..||......+...........                                               
T Consensus       328 Gvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~-----------------------------------------------  360 (401)
T cd05107         328 GILLWEIFTLGGTPYPELPMNEQFYNAIKRGYR-----------------------------------------------  360 (401)
T ss_pred             HHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCC-----------------------------------------------
Confidence            999999998 89999765544433222111000                                               


Q ss_pred             hhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       356 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                       ...+..++.++.+||.+||..||.+||++.+|++.
T Consensus       361 -~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~  395 (401)
T cd05107         361 -MAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHL  395 (401)
T ss_pred             -CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence             01123456788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=100.00  E-value=5.1e-39  Score=298.08  Aligned_cols=245  Identities=18%  Similarity=0.316  Sum_probs=193.7

Q ss_pred             CEEEEeeeccccceEEEEEEEcc-----CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQ-----TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      +|++.+.||+|+||.||+|.+..     ....+++|.+....  .....+..|+.+++.+.      ||||+++++.+..
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~   74 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVN------HPHVIKLYGACSQ   74 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCC------CCCEeeEEEEEec
Confidence            48899999999999999998643     33679999886432  22345667888887774      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNK----------------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK  196 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~----------------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dik  196 (399)
                      ++..++||||+ +++|.+++....                      ...+++..+..++.|++.||+|||+.||+|||||
T Consensus        75 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dik  154 (290)
T cd05045          75 DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLA  154 (290)
T ss_pred             CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhh
Confidence            99999999999 899999986531                      1247888999999999999999999999999999


Q ss_pred             CCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcc
Q 015867          197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPC  271 (399)
Q Consensus       197 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~  271 (399)
                      |+|||+.                        .++.++|+|||++......     .....++..|+|||++.+..++.++
T Consensus       155 p~nill~------------------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~  210 (290)
T cd05045         155 ARNVLVA------------------------EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQS  210 (290)
T ss_pred             hheEEEc------------------------CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHh
Confidence            9999993                        4567999999988643221     1223456789999999888999999


Q ss_pred             hhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhh
Q 015867          272 DMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD  350 (399)
Q Consensus       272 DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  350 (399)
                      ||||||+++|+|++ |..||.+....+....+.....                         +                 
T Consensus       211 Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-------------------------~-----------------  248 (290)
T cd05045         211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYR-------------------------M-----------------  248 (290)
T ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC-------------------------C-----------------
Confidence            99999999999998 9999987655443332211100                         0                 


Q ss_pred             hhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                             ..+..++.++.+|+.+||+.||.+||++.++++
T Consensus       249 -------~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~  281 (290)
T cd05045         249 -------ERPENCSEEMYNLMLTCWKQEPDKRPTFADISK  281 (290)
T ss_pred             -------CCCCCCCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence                   111345678899999999999999999999876

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=100.00  E-value=9.4e-39  Score=297.21  Aligned_cols=253  Identities=21%  Similarity=0.319  Sum_probs=195.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEc----------------cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDR----------------QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGS  127 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~----------------~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~  127 (399)
                      ++|++.+.||+|+||.||++.+.                .++..||+|+++...  .....+..|+++++.+.      |
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~------~   78 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLK------D   78 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCC------C
Confidence            57999999999999999998543                235579999986432  23456778888888875      4


Q ss_pred             cceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCC---------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 015867          128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY---------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKP  197 (399)
Q Consensus       128 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~---------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp  197 (399)
                      +||+++++++...+..++||||+ +++|.+++.....         ..+++..+..++.||+.||+|||+.|++|+||||
T Consensus        79 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp  158 (296)
T cd05095          79 PNIIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLAT  158 (296)
T ss_pred             CCcceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCCh
Confidence            89999999999999999999999 8999999976432         2367788999999999999999999999999999


Q ss_pred             CcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcch
Q 015867          198 ENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCD  272 (399)
Q Consensus       198 ~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~D  272 (399)
                      +|||++                        .++.++|+|||++......     .+...++..|++||...+..++.++|
T Consensus       159 ~Nili~------------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~D  214 (296)
T cd05095         159 RNCLVG------------------------KNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASD  214 (296)
T ss_pred             heEEEc------------------------CCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhh
Confidence            999994                        4667999999988653221     12233467899999998889999999


Q ss_pred             hHHHHHHHHHHHh--CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhh
Q 015867          273 MWSVGCILVELCT--GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD  350 (399)
Q Consensus       273 iwslG~il~ell~--g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  350 (399)
                      +|||||++|||++  |..||...+..+...........        .          .....+                 
T Consensus       215 iwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~--------~----------~~~~~~-----------------  259 (296)
T cd05095         215 VWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRD--------Q----------GRQVYL-----------------  259 (296)
T ss_pred             hhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhh--------c----------cccccC-----------------
Confidence            9999999999998  78999766554443322111000        0          000000                 


Q ss_pred             hhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                             ..+..++..+.+||.+||+.||.+|||+.++++
T Consensus       260 -------~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         260 -------PKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             -------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                   112345678899999999999999999999864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=100.00  E-value=7.8e-39  Score=291.32  Aligned_cols=240  Identities=22%  Similarity=0.307  Sum_probs=193.0

Q ss_pred             eeeccccceEEEEEEEcc-CC--eEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQ-TQ--ERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~-~~--~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      +.||+|++|.||+|.+.. ++  ..||||.+.....  ....+..|+++++.+.      |+||+++++.+.. ...++|
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~-~~~~~v   73 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLD------HENLIRLYGVVLT-HPLMMV   73 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcC------CCCccceeEEEcC-CeEEEE
Confidence            468999999999998755 33  3699999875433  3455667777777775      5999999999888 899999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +++|.+++.+.....+++..+..++.|++.||+|||++|++|+||||+||+++                      
T Consensus        74 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~----------------------  131 (257)
T cd05040          74 TELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA----------------------  131 (257)
T ss_pred             EEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe----------------------
Confidence            9999 99999999876534689999999999999999999999999999999999994                      


Q ss_pred             CCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEH  298 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~  298 (399)
                        .++.++|+|||++......      .....++..|+|||++.+..++.++|||||||++|+|++ |..||...+..+.
T Consensus       132 --~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~  209 (257)
T cd05040         132 --SDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQI  209 (257)
T ss_pred             --cCCEEEeccccccccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence              4577999999987664332      123456788999999999999999999999999999998 9999987666555


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+......                        +                        ..+..++..+.+++.+||+.|
T Consensus       210 ~~~~~~~~~~------------------------~------------------------~~~~~~~~~~~~li~~~l~~~  241 (257)
T cd05040         210 LKKIDKEGER------------------------L------------------------ERPEACPQDIYNVMLQCWAHN  241 (257)
T ss_pred             HHHHHhcCCc------------------------C------------------------CCCccCCHHHHHHHHHHCCCC
Confidence            5444321100                        0                        011234677899999999999


Q ss_pred             CCCCCCHHHHhC
Q 015867          379 PSERLTARQALN  390 (399)
Q Consensus       379 P~~R~t~~ell~  390 (399)
                      |.+|||+.++++
T Consensus       242 p~~Rps~~~~~~  253 (257)
T cd05040         242 PADRPTFAALRE  253 (257)
T ss_pred             cccCCCHHHHHH
Confidence            999999999875

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=100.00  E-value=6.5e-39  Score=294.28  Aligned_cols=241  Identities=21%  Similarity=0.298  Sum_probs=189.8

Q ss_pred             eeeccccceEEEEEEEccCCe--EEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQE--RVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~--~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|.+..++.  .+++|.+...  ......+..|+++++.+.     .|+||+++++++...+..++||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~~~~~~~~~lv~   75 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHRGYLYLAI   75 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhc-----cCCCeeeEEEEEecCCCceEEE
Confidence            358999999999999877765  4688887642  233455677888888875     3699999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          148 EKL-GPSLFDFLKRNK--------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      ||+ +++|.+++....              ...+++..+..++.|++.||+|||+.|++|+||||+|||+          
T Consensus        76 e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili----------  145 (270)
T cd05047          76 EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILV----------  145 (270)
T ss_pred             EeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEE----------
Confidence            999 899999997643              1247889999999999999999999999999999999999          


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC--cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEAL  289 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~P  289 (399)
                                    +.++.++|+|||++.......  .....+..|+|||++.+..++.++|+||||+++|+|++ |..|
T Consensus       146 --------------~~~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~p  211 (270)
T cd05047         146 --------------GENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP  211 (270)
T ss_pred             --------------cCCCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCC
Confidence                          346679999999875322211  11223567999999988899999999999999999997 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+..+....+.....                                                 ...+..++.++.+
T Consensus       212 f~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~  242 (270)
T cd05047         212 YCGMTCAELYEKLPQGYR-------------------------------------------------LEKPLNCDDEVYD  242 (270)
T ss_pred             ccccCHHHHHHHHhCCCC-------------------------------------------------CCCCCcCCHHHHH
Confidence            977655444333211000                                                 0011234667889


Q ss_pred             HHHHccccCCCCCCCHHHHhC
Q 015867          370 LLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~  390 (399)
                      |+.+||+.||.+|||+.++++
T Consensus       243 li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         243 LMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             HHHHHcccChhhCCCHHHHHH
Confidence            999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=100.00  E-value=7e-39  Score=294.67  Aligned_cols=248  Identities=19%  Similarity=0.293  Sum_probs=198.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEcc-----CCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQ-----TQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||.|+||.||+|+...     +.+.|++|.+.....  ....+..|+++++.+.      |+|++++++++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~   78 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLS------HKNVVRLLGLCR   78 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcC------CcceeeeEEEEC
Confidence            469999999999999999998653     356799998864332  2456778888888875      489999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCC-------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYC-------PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~-------~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~  210 (399)
                      +.+..++||||+ +++|.+++......       .+++..+..++.||+.||+|||+.||+|+||||+||+++       
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~-------  151 (275)
T cd05046          79 EAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS-------  151 (275)
T ss_pred             CCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe-------
Confidence            999999999999 89999999865521       489999999999999999999999999999999999994       


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-  285 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-  285 (399)
                                       .++.++++|||++......    .....++..|+|||.+.+..++.++||||||+++|++++ 
T Consensus       152 -----------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~  214 (275)
T cd05046         152 -----------------SQREVKVSLLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQ  214 (275)
T ss_pred             -----------------CCCcEEEcccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhC
Confidence                             4567899999987643221    223456778999999988889999999999999999998 


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |..||...........+....                        ..|+                        ....++.
T Consensus       215 ~~~p~~~~~~~~~~~~~~~~~------------------------~~~~------------------------~~~~~~~  246 (275)
T cd05046         215 GELPFYGLSDEEVLNRLQAGK------------------------LELP------------------------VPEGCPS  246 (275)
T ss_pred             CCCCccccchHHHHHHHHcCC------------------------cCCC------------------------CCCCCCH
Confidence            889997655444333332110                        0111                        1134567


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      .+.++|.+||+.||.+|||+.+++.+
T Consensus       247 ~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         247 RLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             HHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            88999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=100.00  E-value=3.9e-40  Score=288.99  Aligned_cols=288  Identities=26%  Similarity=0.458  Sum_probs=230.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ..||.-++.+|.|.- .|-.|.+.-.++.||+|.+...   ....+....|..++..+.|      +|++.++++|.-..
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~------~nii~l~n~ftP~~   88 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNH------KNIISLLNVFTPQK   88 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcc------cceeeeeeccCccc
Confidence            457999999999998 7778888889999999987532   2233556678888887764      89999999987543


Q ss_pred             ------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          142 ------HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       142 ------~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                            ..|+|||++..+|.+.+.-    .++-..+.+++.|++.|+.|||+.||+||||||+||++             
T Consensus        89 ~l~~~~e~y~v~e~m~~nl~~vi~~----elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv-------------  151 (369)
T KOG0665|consen   89 TLEEFQEVYLVMELMDANLCQVILM----ELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVV-------------  151 (369)
T ss_pred             cHHHHHhHHHHHHhhhhHHHHHHHH----hcchHHHHHHHHHHHHHHHHHHhcceeecccCccccee-------------
Confidence                  5799999999999999883    37888999999999999999999999999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                 ..+..+||.|||+|......  .+.++.|..|.|||++.+.+|.+.+||||+||++.||++|..-|.+.
T Consensus       152 -----------~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~  220 (369)
T KOG0665|consen  152 -----------NSDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGK  220 (369)
T ss_pred             -----------cchhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCc
Confidence                       45778999999999875544  46788999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..++..++.+.++.+.+++..........+....+..  .. ....   ..+  .+..-.......+.-+..++|++.+
T Consensus       221 d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y--~~-~~f~---~~f--pD~~f~~~~e~~~~~~~~ardll~~  292 (369)
T KOG0665|consen  221 DHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQY--QA-ISFS---ELF--PDSLFPVVLEGSKLDCSLARDLLSK  292 (369)
T ss_pred             hHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHh--hc-cchh---hhC--CcccccccccCCccchHHHHHHHHH
Confidence            99999999999999999988887665444443321111  10 0000   000  0111111122223445678999999


Q ss_pred             ccccCCCCCCCHHHHhCCcccc
Q 015867          374 LLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      ||..||++|.++.++|+||||+
T Consensus       293 MLvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  293 MLVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hhccChhhcccHHHHhcCCeee
Confidence            9999999999999999999997

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=2.5e-39  Score=294.98  Aligned_cols=245  Identities=22%  Similarity=0.315  Sum_probs=188.2

Q ss_pred             eeeccccceEEEEEEEccCCe-------EEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           72 SKMGEGTFGRVLECWDRQTQE-------RVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~-------~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +.||.|+||.||+|.+...+.       .||+|.+.... .....+..|..+++.+.      |+|++++++++...+..
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~------h~~iv~~~~~~~~~~~~   74 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLS------HKHLVLNYGVCVCGDES   74 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCC------CCChhheeeEEEeCCCc
Confidence            369999999999998765443       48888875432 22344566777776654      59999999999998999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++...+. .+++..+..++.||+.||+|||++||+||||||+||+++.++..++            
T Consensus        75 ~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~------------  141 (258)
T cd05078          75 IMVQEYVKFGSLDTYLKKNKN-LINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKT------------  141 (258)
T ss_pred             EEEEecCCCCcHHHHHhcCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEeccccccc------------
Confidence            9999999 8999999987553 5899999999999999999999999999999999999977654332            


Q ss_pred             cccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhC-CCCCCCCCcHHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTG-EALFQTHENLEHLA  300 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g-~~Pf~~~~~~~~~~  300 (399)
                          .....++++|||.+..... .....++..|+|||++.+. .++.++|+||||+++|+|++| .+||...+......
T Consensus       142 ----~~~~~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~~  216 (258)
T cd05078         142 ----GNPPFIKLSDPGISITVLP-KEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKLQ  216 (258)
T ss_pred             ----CCCceEEecccccccccCC-chhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHHH
Confidence                2234589999998764332 2345788999999999874 589999999999999999998 56766544433221


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .. ....                                                  ..+...+.++.+||.+||+.||.
T Consensus       217 ~~-~~~~--------------------------------------------------~~~~~~~~~~~~li~~~l~~~p~  245 (258)
T cd05078         217 FY-EDRH--------------------------------------------------QLPAPKWTELANLINQCMDYEPD  245 (258)
T ss_pred             HH-Hccc--------------------------------------------------cCCCCCcHHHHHHHHHHhccChh
Confidence            11 1000                                                  01123345678999999999999


Q ss_pred             CCCCHHHHhCC
Q 015867          381 ERLTARQALNH  391 (399)
Q Consensus       381 ~R~t~~ell~h  391 (399)
                      +|||++++++.
T Consensus       246 ~Rps~~~il~~  256 (258)
T cd05078         246 FRPSFRAIIRD  256 (258)
T ss_pred             hCCCHHHHHHh
Confidence            99999999863

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=100.00  E-value=8.5e-39  Score=319.34  Aligned_cols=271  Identities=19%  Similarity=0.281  Sum_probs=178.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccC----CeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeecee----
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQT----QERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW----  136 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~----~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~----  136 (399)
                      .++|++.+.||+|+||.||+|++..+    +..||||.+.....      .|..+...+.+..   +.++..+...    
T Consensus       131 ~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~------~e~~~~e~l~~~~---~~~~~~~~~~~~~~  201 (566)
T PLN03225        131 KDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA------VEIWMNERVRRAC---PNSCADFVYGFLEP  201 (566)
T ss_pred             cCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch------hHHHHHHHHHhhc---hhhHHHHHHhhhcc
Confidence            46899999999999999999999888    89999998754211      1222222222211   0111111111    


Q ss_pred             --eccCCeEEEEEccC-CCCHHHHHHhcCCC------------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 015867          137 --FDYRNHICIVFEKL-GPSLFDFLKRNKYC------------------PFPVDLVREFGRQLLESVAYMHDLRLIHTDL  195 (399)
Q Consensus       137 --~~~~~~~~lv~e~~-~~~L~~~l~~~~~~------------------~~~~~~~~~i~~qi~~~L~~lH~~givH~Di  195 (399)
                        .......++||||+ +++|.+++......                  ......+..++.||+.||+|||++||+||||
T Consensus       202 ~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDL  281 (566)
T PLN03225        202 VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDV  281 (566)
T ss_pred             cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcC
Confidence              23466899999999 88999998754310                  1123456789999999999999999999999


Q ss_pred             CCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCC----CCCcccccCCCccchhhhhCCC-----
Q 015867          196 KPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN----QNHSSIVSTRHYRAPEVILGLG-----  266 (399)
Q Consensus       196 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~----~~~~~~~gt~~y~aPE~~~~~~-----  266 (399)
                      ||+|||++.                       .++.+||+|||++....    ......+||+.|+|||++....     
T Consensus       282 KP~NILl~~-----------------------~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~  338 (566)
T PLN03225        282 KPQNIIFSE-----------------------GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSA  338 (566)
T ss_pred             CHHHEEEeC-----------------------CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCC
Confidence            999999942                       35679999999986532    2235678999999999764322     


Q ss_pred             -----------------CCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCc
Q 015867          267 -----------------WSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGS  329 (399)
Q Consensus       267 -----------------~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~  329 (399)
                                       ++.++|||||||+||||+++..|+.  +....+..+....+.....+........        
T Consensus       339 ~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~~~~~--------  408 (566)
T PLN03225        339 PSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSD--SNLIQFNRQLKRNDYDLVAWRKLVEPRA--------  408 (566)
T ss_pred             ccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCc--hHHHHHHHHHHhcCCcHHHHHHhhcccc--------
Confidence                             3446699999999999999776643  2222332222222111111111110000        


Q ss_pred             ccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          330 RLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       330 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                               ..+....           ....+.......+||.+||+.||.+|||+.|+|+||||++.
T Consensus       409 ---------~~~~~~~-----------~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~  456 (566)
T PLN03225        409 ---------SPDLRRG-----------FEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDRE  456 (566)
T ss_pred             ---------chhhhhh-----------hhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCC
Confidence                     0000000           00011223456799999999999999999999999999874

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=100.00  E-value=8.2e-39  Score=296.34  Aligned_cols=246  Identities=19%  Similarity=0.295  Sum_probs=195.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||+|+||.||+|.+.     .++..||+|++....  .....+..|+.+++.+.      |+|++++++++.
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~------h~~iv~~~~~~~   78 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD------HPNIVKLLGVCA   78 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcC------CCchheEEEEEc
Confidence            56999999999999999999864     367889999986432  22355667888888774      599999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC--------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY--------------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKP  197 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~--------------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp  197 (399)
                      ..+..++||||+ +++|.+++.....                    ..+++..+..++.||+.||.|||++|++||||||
T Consensus        79 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p  158 (288)
T cd05050          79 VGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLAT  158 (288)
T ss_pred             CCCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccH
Confidence            999999999999 8899999975321                    2477888999999999999999999999999999


Q ss_pred             CcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcch
Q 015867          198 ENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCD  272 (399)
Q Consensus       198 ~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~D  272 (399)
                      +|||++                        .++.++|+|||++......     .....++..|+|||.+.+..++.++|
T Consensus       159 ~nil~~------------------------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~D  214 (288)
T cd05050         159 RNCLVG------------------------ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESD  214 (288)
T ss_pred             hheEec------------------------CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhH
Confidence            999983                        4667999999987643221     12233466799999999999999999


Q ss_pred             hHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhh
Q 015867          273 MWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR  351 (399)
Q Consensus       273 iwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~  351 (399)
                      +|||||++|+|++ |..||.+.+..+....+......                                           
T Consensus       215 v~slG~il~el~~~~~~p~~~~~~~~~~~~~~~~~~~-------------------------------------------  251 (288)
T cd05050         215 VWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVRDGNVL-------------------------------------------  251 (288)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCC-------------------------------------------
Confidence            9999999999998 88899776655544433221000                                           


Q ss_pred             hhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       352 ~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                            ..+..++.++.+||.+||+.||.+|||+.|+++
T Consensus       252 ------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         252 ------SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             ------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                  011245677899999999999999999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=100.00  E-value=1.4e-38  Score=289.87  Aligned_cols=237  Identities=24%  Similarity=0.338  Sum_probs=187.6

Q ss_pred             eeccccceEEEEEEEc--cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEc
Q 015867           73 KMGEGTFGRVLECWDR--QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE  148 (399)
Q Consensus        73 ~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e  148 (399)
                      .||+|+||.||+|.+.  .++..||+|++....  .....+..|+.+++.+.      |+||+++++++. ....++|||
T Consensus         2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~------h~~ii~~~~~~~-~~~~~lv~e   74 (257)
T cd05115           2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLD------NPYIVRMIGVCE-AEALMLVME   74 (257)
T ss_pred             ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcC------CCCeEEEEEEEc-CCCeEEEEE
Confidence            3899999999998764  456679999986532  22345777888888875      599999999876 457899999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCC
Q 015867          149 KL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP  227 (399)
Q Consensus       149 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~  227 (399)
                      |+ +++|.+++..... .+++..+..++.||+.||.|||++|++|+||||+|||++                        
T Consensus        75 ~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~------------------------  129 (257)
T cd05115          75 MASGGPLNKFLSGKKD-EITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV------------------------  129 (257)
T ss_pred             eCCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc------------------------
Confidence            99 8999999875432 589999999999999999999999999999999999993                        


Q ss_pred             CCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 015867          228 KSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLA  300 (399)
Q Consensus       228 ~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~  300 (399)
                      .++.++|+|||++.......      ....++..|+|||++.+..++.++|+||||+++|++++ |..||......+...
T Consensus       130 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~  209 (257)
T cd05115         130 NQHYAKISDFGLSKALGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMS  209 (257)
T ss_pred             CCCcEEeccCCccccccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHH
Confidence            46679999999886532221      11123568999999998889999999999999999996 999998776655444


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+.....                       .                          ..+..++.++.++|.+||..||.
T Consensus       210 ~~~~~~~-----------------------~--------------------------~~~~~~~~~l~~li~~c~~~~~~  240 (257)
T cd05115         210 FIEQGKR-----------------------L--------------------------DCPAECPPEMYALMKDCWIYKWE  240 (257)
T ss_pred             HHHCCCC-----------------------C--------------------------CCCCCCCHHHHHHHHHHcCCChh
Confidence            3322110                       0                          11134577889999999999999


Q ss_pred             CCCCHHHHhC
Q 015867          381 ERLTARQALN  390 (399)
Q Consensus       381 ~R~t~~ell~  390 (399)
                      +||++.++.+
T Consensus       241 ~Rp~~~~i~~  250 (257)
T cd05115         241 DRPNFAKVEE  250 (257)
T ss_pred             hCcCHHHHHH
Confidence            9999998865

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-39  Score=314.95  Aligned_cols=256  Identities=24%  Similarity=0.428  Sum_probs=219.4

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-----
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-----  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-----  139 (399)
                      ++.|+|.+.||.|.+|.||+++...+++..|+|++............|.++++.+.     .|||++.++++|-.     
T Consensus        18 ~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~-----~hpnv~~fyg~~~k~~~~~   92 (953)
T KOG0587|consen   18 ADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYS-----HHPNVATFYGAFIKKDPGN   92 (953)
T ss_pred             CCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhcc-----CCCCcceEEEEEEEecCCC
Confidence            45699999999999999999999999999999999887777888888888998877     48999999998854     


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ++.++|||||| ||+.-|+++......+.+..+.+|++.++.||.+||...++|||||-.|||++               
T Consensus        93 ~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT---------------  157 (953)
T KOG0587|consen   93 GDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLT---------------  157 (953)
T ss_pred             CCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEe---------------
Confidence            57999999999 99999999987777899999999999999999999999999999999999994               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCC-----CCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                               .++.|||+|||.+....   ...++.+||+.|||||++.-.     .|+..+|+||||++..||.-|.+|+
T Consensus       158 ---------~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl  228 (953)
T KOG0587|consen  158 ---------ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPL  228 (953)
T ss_pred             ---------ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCc
Confidence                     57789999999876533   335788999999999999643     5788999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      -.......+-.|-  ..++|.                                             .+.+...+.++.+|
T Consensus       229 ~DmHPmraLF~Ip--RNPPPk---------------------------------------------Lkrp~kWs~~FndF  261 (953)
T KOG0587|consen  229 CDMHPMRALFLIP--RNPPPK---------------------------------------------LKRPKKWSKKFNDF  261 (953)
T ss_pred             cCcchhhhhccCC--CCCCcc---------------------------------------------ccchhhHHHHHHHH
Confidence            7665544443332  222222                                             12334668889999


Q ss_pred             HHHccccCCCCCCCHHHHhCCccccC
Q 015867          371 LHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |..||..|-.+||+..++|.|||++.
T Consensus       262 Is~cL~Kd~e~RP~~~~ll~hpFi~e  287 (953)
T KOG0587|consen  262 ISTCLVKDYEQRPSTEELLKHPFITE  287 (953)
T ss_pred             HHHHHhhccccCcchhhhccCCcccc
Confidence            99999999999999999999999985

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=100.00  E-value=1.4e-38  Score=288.66  Aligned_cols=238  Identities=23%  Similarity=0.350  Sum_probs=191.6

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      ++||.|+||.||+|.+.. ++.||+|.+.....  ....+..|+++++.+.      |+||+.+++++......++||||
T Consensus         1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~------~~~i~~~~~~~~~~~~~~~v~e~   73 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYD------HPNIVKLIGVCVQKQPIYIVMEL   73 (251)
T ss_pred             CccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCeEEEEEEEecCCCeEEEEEc
Confidence            469999999999999877 89999998865322  3445667777777764      58999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      + +++|.+++..... .++...+..++.|++.||+|||++|++||||||+|||+                        +.
T Consensus        74 ~~~~~l~~~l~~~~~-~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili------------------------~~  128 (251)
T cd05041          74 VPGGSLLTFLRKKKN-RLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV------------------------GE  128 (251)
T ss_pred             CCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEE------------------------cC
Confidence            9 8999999976543 58899999999999999999999999999999999999                        34


Q ss_pred             CCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 015867          229 SSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM  302 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i  302 (399)
                      ++.++|+|||.+.......     ....++..|+|||++.+..++.++|+||||+++|+|++ |..||...........+
T Consensus       129 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~  208 (251)
T cd05041         129 NNVLKISDFGMSREEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERI  208 (251)
T ss_pred             CCcEEEeeccccccccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHH
Confidence            6679999999886543211     12233567999999998899999999999999999999 89999876654433333


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      .....                                                 ...+..++.++.+||.+||..||.+|
T Consensus       209 ~~~~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~R  239 (251)
T cd05041         209 ESGYR-------------------------------------------------MPAPQLCPEEIYRLMLQCWAYDPENR  239 (251)
T ss_pred             hcCCC-------------------------------------------------CCCCccCCHHHHHHHHHHhccChhhC
Confidence            21100                                                 00112456778999999999999999


Q ss_pred             CCHHHHhC
Q 015867          383 LTARQALN  390 (399)
Q Consensus       383 ~t~~ell~  390 (399)
                      ||+.|+++
T Consensus       240 p~~~ell~  247 (251)
T cd05041         240 PSFSEIYN  247 (251)
T ss_pred             cCHHHHHH
Confidence            99999986

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=1.1e-38  Score=294.81  Aligned_cols=259  Identities=23%  Similarity=0.355  Sum_probs=192.7

Q ss_pred             CEEEEeeeccccceEEEEEEE----ccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           67 RYKILSKMGEGTFGRVLECWD----RQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      -|++++.||+|+||.||+|..    ..+++.||+|.++...  .....+..|+++++.+.      |+|++++++++...
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~   78 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY------HENIVKYKGICTED   78 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCC------CCCeeeeeeEEecC
Confidence            379999999999999999974    4568899999986432  22345677888888775      59999999988764


Q ss_pred             --CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          141 --NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       141 --~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                        ...++||||+ |++|.+++.+... .+++..+..++.||+.||+|||+.|++||||||+||+++              
T Consensus        79 ~~~~~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~--------------  143 (284)
T cd05079          79 GGNGIKLIMEFLPSGSLKEYLPRNKN-KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE--------------  143 (284)
T ss_pred             CCCceEEEEEccCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc--------------
Confidence              6789999999 9999999976542 589999999999999999999999999999999999994              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                .++.++|+|||++......      .....|+..|+|||++.+..++.++||||||+++|+|+++..|+.
T Consensus       144 ----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~  213 (284)
T cd05079         144 ----------SEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSES  213 (284)
T ss_pred             ----------CCCCEEECCCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCc
Confidence                      4567999999988654322      123456778999999998889999999999999999999887653


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ....  ...   ...++.+....                        ..........     ......+..++..+.+||
T Consensus       214 ~~~~--~~~---~~~~~~~~~~~------------------------~~~~~~~~~~-----~~~~~~~~~~~~~~~~li  259 (284)
T cd05079         214 SPMT--LFL---KMIGPTHGQMT------------------------VTRLVRVLEE-----GKRLPRPPNCPEEVYQLM  259 (284)
T ss_pred             cccc--hhh---hhccccccccc------------------------HHHHHHHHHc-----CccCCCCCCCCHHHHHHH
Confidence            3211  000   00010000000                        0000000000     000112245678899999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||+.||.+|||+.++++
T Consensus       260 ~~~l~~~p~~Rpt~~~il~  278 (284)
T cd05079         260 RKCWEFQPSKRTTFQNLIE  278 (284)
T ss_pred             HHHccCCcccCcCHHHHHH
Confidence            9999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=100.00  E-value=2e-38  Score=290.89  Aligned_cols=244  Identities=24%  Similarity=0.334  Sum_probs=194.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccC---CeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQT---QERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ++|.+.+.||+|+||.||+|.+...   ...||||......  .....+..|+.+++.+.      |+||+++++++.+ 
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~------h~~i~~~~~~~~~-   78 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFD------HPHIVKLIGVITE-   78 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCC------CCchhceeEEEcC-
Confidence            4699999999999999999986543   3569999886432  33456677888877774      5899999998875 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++..... .+++..+..++.|++.||+|||+.|++|+||||+|||++                
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~----------------  141 (270)
T cd05056          79 NPVWIVMELAPLGELRSYLQVNKY-SLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS----------------  141 (270)
T ss_pred             CCcEEEEEcCCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe----------------
Confidence            4578999999 9999999987543 589999999999999999999999999999999999994                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHE  294 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~  294 (399)
                              .++.++|+|||++.......    ....++..|+|||.+....++.++|+||||+++|++++ |..||...+
T Consensus       142 --------~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~  213 (270)
T cd05056         142 --------SPDCVKLGDFGLSRYLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVK  213 (270)
T ss_pred             --------cCCCeEEccCceeeecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCC
Confidence                    45679999999876533221    12234568999999988899999999999999999996 999998777


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....+......                                                 ..++.++..+.+||.+|
T Consensus       214 ~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~~  244 (270)
T cd05056         214 NNDVIGRIENGERL-------------------------------------------------PMPPNCPPTLYSLMTKC  244 (270)
T ss_pred             HHHHHHHHHcCCcC-------------------------------------------------CCCCCCCHHHHHHHHHH
Confidence            65554443221100                                                 11235577889999999


Q ss_pred             cccCCCCCCCHHHHhC
Q 015867          375 LRYDPSERLTARQALN  390 (399)
Q Consensus       375 L~~dP~~R~t~~ell~  390 (399)
                      |..||.+|||+.+++.
T Consensus       245 l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         245 WAYDPSKRPRFTELKA  260 (270)
T ss_pred             cCCChhhCcCHHHHHH
Confidence            9999999999999875

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=100.00  E-value=1.3e-38  Score=291.78  Aligned_cols=245  Identities=20%  Similarity=0.323  Sum_probs=191.8

Q ss_pred             eeeccccceEEEEEEEccCC------eEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           72 SKMGEGTFGRVLECWDRQTQ------ERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~------~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +.||+|+||.||+|++....      +.+|||.+....  .....+..|+.+++.+.      |+||+++++++...+..
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~   74 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFN------HPNIVKLLGVCLLNEPQ   74 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcC------CCCeeeEeeeecCCCCe
Confidence            36899999999999875433      789999886432  23445667777777764      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNK-----YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      ++||||+ +++|.+++.+..     ...+++..+..++.|++.||.|||+++++|+||||+||+++.++.          
T Consensus        75 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~----------  144 (269)
T cd05044          75 YIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGY----------  144 (269)
T ss_pred             EEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCC----------
Confidence            9999999 899999997532     224788999999999999999999999999999999999965320          


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                               +....++|+|||++......     .....++..|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus       145 ---------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~  215 (269)
T cd05044         145 ---------DADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYP  215 (269)
T ss_pred             ---------CCCcceEECCcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCc
Confidence                     23447999999987643221     123345788999999999899999999999999999998 999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+.....                                                 ......++..+.+||
T Consensus       216 ~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~li  246 (269)
T cd05044         216 ALNNQEVLQHVTAGGR-------------------------------------------------LQKPENCPDKIYQLM  246 (269)
T ss_pred             ccCHHHHHHHHhcCCc-------------------------------------------------cCCcccchHHHHHHH
Confidence            7665554443321100                                                 011134567789999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||..||.+||++.++++
T Consensus       247 ~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         247 TNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             HHHcCCCcccCCCHHHHHH
Confidence            9999999999999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=100.00  E-value=2.4e-38  Score=291.19  Aligned_cols=243  Identities=24%  Similarity=0.324  Sum_probs=183.4

Q ss_pred             eeccccceEEEEEEEccC------------------------CeEEEEEEEecchh-hhHHHHHHHHHHHHhhhcCCCCC
Q 015867           73 KMGEGTFGRVLECWDRQT------------------------QERVAIKVVRSIRK-YRDAAMIEIDVLQHLAKNDKGGS  127 (399)
Q Consensus        73 ~lG~G~~g~V~~~~~~~~------------------------~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~  127 (399)
                      .||+|+||.||+|....+                        ...|++|++..... ....+..|+.+++.+      .|
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l------~h   75 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQV------SH   75 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcC------CC
Confidence            599999999999874321                        24588998864322 223455566666655      46


Q ss_pred             cceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       128 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                      +||+++++++......++||||+ +++|..++.+... .+++..+..++.||+.||+|||++||+||||||+|||++..+
T Consensus        76 ~niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~  154 (274)
T cd05076          76 IHLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG-RVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLG  154 (274)
T ss_pred             CCeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccC
Confidence            99999999999999999999999 8999998876432 689999999999999999999999999999999999997543


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHH-
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELC-  284 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell-  284 (399)
                      ..+                 .....++++|||.+...... ....++..|+|||.+.+ ..++.++|+||||+++|+++ 
T Consensus       155 ~~~-----------------~~~~~~kl~d~g~~~~~~~~-~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~  216 (274)
T cd05076         155 LAE-----------------GTSPFIKLSDPGVSFTALSR-EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICF  216 (274)
T ss_pred             ccc-----------------CccceeeecCCccccccccc-cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHh
Confidence            211                 12445899999987543222 23467889999998875 56899999999999999985 


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       285 ~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                      +|..||......+....+.. ....                                                  +...+
T Consensus       217 ~g~~p~~~~~~~~~~~~~~~-~~~~--------------------------------------------------~~~~~  245 (274)
T cd05076         217 DGEVPLKERTPSEKERFYEK-KHRL--------------------------------------------------PEPSC  245 (274)
T ss_pred             CCCCCccccChHHHHHHHHh-ccCC--------------------------------------------------CCCCC
Confidence            69999976554332221111 0000                                                  01224


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      ..+.++|.+||+.||.+|||+.+++++
T Consensus       246 ~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         246 KELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             hHHHHHHHHHcccChhhCcCHHHHHHh
Confidence            567899999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=100.00  E-value=3.6e-38  Score=285.73  Aligned_cols=238  Identities=21%  Similarity=0.331  Sum_probs=189.8

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      +.||+|+||.||+|... ++..+|+|.+....  .....+..|+++++.+.      |+|++++++++...+..++||||
T Consensus         1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~lv~e~   73 (250)
T cd05085           1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDLPQELKIKFLSEARILKQYD------HPNIVKLIGVCTQRQPIYIVMEL   73 (250)
T ss_pred             CccCCCCCceEEEEEec-CCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCC------CCCcCeEEEEEecCCccEEEEEC
Confidence            36899999999999854 67889999986432  22334666777777764      69999999999999999999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCC
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK  228 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (399)
                      + +++|.+++..... .+++..+..++.|++.+|.|||+.|++|+||||+||+++                        .
T Consensus        74 ~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~------------------------~  128 (250)
T cd05085          74 VPGGDFLSFLRKKKD-ELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG------------------------E  128 (250)
T ss_pred             CCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc------------------------C
Confidence            9 9999999876543 588999999999999999999999999999999999994                        4


Q ss_pred             CCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHH
Q 015867          229 SSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME  303 (399)
Q Consensus       229 ~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~  303 (399)
                      ++.++|+|||++.......    ....++..|+|||++.+..++.++|+||||+++|++++ |..||...........+.
T Consensus       129 ~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~  208 (250)
T cd05085         129 NNVLKISDFGMSRQEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVE  208 (250)
T ss_pred             CCeEEECCCccceeccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence            5679999999876532221    12234567999999998889999999999999999998 999998766554443332


Q ss_pred             HHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCC
Q 015867          304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL  383 (399)
Q Consensus       304 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~  383 (399)
                      ....                                                 ...+..++..+.+|+.+||..||.+||
T Consensus       209 ~~~~-------------------------------------------------~~~~~~~~~~~~~li~~~l~~~p~~Rp  239 (250)
T cd05085         209 KGYR-------------------------------------------------MSCPQKCPDDVYKVMQRCWDYKPENRP  239 (250)
T ss_pred             cCCC-------------------------------------------------CCCCCCCCHHHHHHHHHHcccCcccCC
Confidence            2100                                                 011134567889999999999999999


Q ss_pred             CHHHHhC
Q 015867          384 TARQALN  390 (399)
Q Consensus       384 t~~ell~  390 (399)
                      |+.++++
T Consensus       240 ~~~~l~~  246 (250)
T cd05085         240 KFSELQK  246 (250)
T ss_pred             CHHHHHH
Confidence            9999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-40  Score=283.59  Aligned_cols=279  Identities=27%  Similarity=0.465  Sum_probs=224.3

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC-----Ce
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-----NH  142 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-----~~  142 (399)
                      -+.||.|+||.||.+.+..+|+.||+|.+....   ...+.+.+|.++|..++      |.|++..++..+-.     ..
T Consensus        58 DRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFk------HdNVLSaLDILQPph~dfFqE  131 (449)
T KOG0664|consen   58 DRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFR------HDNVLSLLDILQPANPSFFQE  131 (449)
T ss_pred             CCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhc------cccHHHHHHhcCCCCchHHHH
Confidence            366999999999999999999999999885321   22355666777776665      47888777766543     25


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      +|+|.|.+..+|...|.+-.  .++...++-++.||+.||.|||+.+|.||||||.|+|+                    
T Consensus       132 iYV~TELmQSDLHKIIVSPQ--~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLV--------------------  189 (449)
T KOG0664|consen  132 LYVLTELMQSDLHKIIVSPQ--ALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLV--------------------  189 (449)
T ss_pred             HHHHHHHHHhhhhheeccCC--CCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEe--------------------
Confidence            68899999889999887654  69999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                          +++-.+||||||+++.....    .+.-+-|.+|+|||++.|. .|+.++||||+|||+.|++..+..|...+..+
T Consensus       190 ----NSNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Piq  265 (449)
T KOG0664|consen  190 ----NSNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIE  265 (449)
T ss_pred             ----ccCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHH
Confidence                56788999999999864433    2344678999999999986 69999999999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ++..|-..++.+..+..+.++++...-..++... -|+...             +.  ....+.....+..+++.+||..
T Consensus       266 QL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k-~Ps~~v-------------LY--tlsS~~~~~heav~~~~~~l~~  329 (449)
T KOG0664|consen  266 QLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLR-APDTQR-------------LY--KIASPDDKNHEAVDLLQKLLHF  329 (449)
T ss_pred             HHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCC-CCCccc-------------ee--eecCCcccchHHHHHHHHHhCC
Confidence            9999999999999988888887766555554332 121110             00  0111223345678999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|++.++.+.|+++.++
T Consensus       330 d~dkris~~~A~~~~~~~e~  349 (449)
T KOG0664|consen  330 DPDKRISVEEALQHRYLEEG  349 (449)
T ss_pred             CCcccccHhhhccccccccc
Confidence            99999999999999998764

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=100.00  E-value=4e-38  Score=290.39  Aligned_cols=245  Identities=21%  Similarity=0.302  Sum_probs=195.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCe----EEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQE----RVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+|++.+.||+|+||.||+|.+..+|+    .+|+|.......  ....+..|+.+++.+.      |+|++++++++.
T Consensus         6 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~   79 (279)
T cd05057           6 ETELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVD------HPHVVRLLGICL   79 (279)
T ss_pred             HHHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCC------CCCcceEEEEEe
Confidence            3579999999999999999998766654    589998765432  2345667777887764      599999999887


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      . ...++||||+ +++|.+++.+... .+++..+..++.||+.||+|||+.||+|+||||+||+++              
T Consensus        80 ~-~~~~~v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~--------------  143 (279)
T cd05057          80 S-SQVQLITQLMPLGCLLDYVRNHKD-NIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK--------------  143 (279)
T ss_pred             c-CceEEEEecCCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc--------------
Confidence            6 7899999999 9999999987543 489999999999999999999999999999999999994              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCCCc-----ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                                .++.++|+|||.+........     ...++..|+|||.+....++.++|+||||+++|++++ |..||.
T Consensus       144 ----------~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~  213 (279)
T cd05057         144 ----------TPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYE  213 (279)
T ss_pred             ----------CCCeEEECCCcccccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCC
Confidence                      456799999998865432221     1123567999999988899999999999999999998 999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +....+....+..... .                                                ..+..++.++.+++
T Consensus       214 ~~~~~~~~~~~~~~~~-~------------------------------------------------~~~~~~~~~~~~~~  244 (279)
T cd05057         214 GIPAVEIPDLLEKGER-L------------------------------------------------PQPPICTIDVYMVL  244 (279)
T ss_pred             CCCHHHHHHHHhCCCC-C------------------------------------------------CCCCCCCHHHHHHH
Confidence            7765554443332110 0                                                01123456788999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||..||.+|||+.++++
T Consensus       245 ~~~l~~~p~~Rp~~~~l~~  263 (279)
T cd05057         245 VKCWMIDAESRPTFKELIN  263 (279)
T ss_pred             HHHcCCChhhCCCHHHHHH
Confidence            9999999999999998864

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=100.00  E-value=4.2e-38  Score=290.35  Aligned_cols=247  Identities=20%  Similarity=0.248  Sum_probs=195.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEcc----CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQ----TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      .++|++.+.||+|+||.||+|.+..    ++..|++|++....  .....+..|..+++.+.      |+|++++++++.
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~------h~ni~~~~~~~~   78 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLS------HQNILPILHVCI   78 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEe
Confidence            4579999999999999999998765    36889999886432  22344566777777664      699999999765


Q ss_pred             c-CCeEEEEEccC-CCCHHHHHHhcCC------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccC
Q 015867          139 Y-RNHICIVFEKL-GPSLFDFLKRNKY------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       139 ~-~~~~~lv~e~~-~~~L~~~l~~~~~------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~  210 (399)
                      . ....+++++|+ +++|.+++.....      ..+++..+..++.||+.||+|||+.+++|+||||+||+++       
T Consensus        79 ~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~-------  151 (280)
T cd05043          79 EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID-------  151 (280)
T ss_pred             cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc-------
Confidence            5 57889999999 8999999976432      3589999999999999999999999999999999999994       


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  285 (399)
                                       .++.++|+|||++.......     ....++..|+|||++.+..++.++||||||+++|++++
T Consensus       152 -----------------~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~  214 (280)
T cd05043         152 -----------------EELQVKITDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMT  214 (280)
T ss_pred             -----------------CCCcEEECCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhc
Confidence                             45779999999986532211     12345678999999999899999999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          286 -GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       286 -g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                       |.+||...+..+....+....                       ..                          .....++
T Consensus       215 ~g~~p~~~~~~~~~~~~~~~~~-----------------------~~--------------------------~~~~~~~  245 (280)
T cd05043         215 LGQTPYVEIDPFEMAAYLKDGY-----------------------RL--------------------------AQPINCP  245 (280)
T ss_pred             CCCCCcCcCCHHHHHHHHHcCC-----------------------CC--------------------------CCCCcCC
Confidence             999998766554433322110                       00                          0112456


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      .++.+++.+||..||++|||+.++++
T Consensus       246 ~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         246 DELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             HHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            77899999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=100.00  E-value=5.7e-38  Score=290.08  Aligned_cols=261  Identities=24%  Similarity=0.308  Sum_probs=191.3

Q ss_pred             CCEEEEeeeccccceEEEEEE----EccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-
Q 015867           66 PRYKILSKMGEGTFGRVLECW----DRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-  139 (399)
                      .+|++++.||+|+||.||++.    +..+++.||+|.+.... .....+..|+++++.+.      |+||+++++++.. 
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~   77 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQ------HDNIVKYKGVCYSA   77 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC------CCCeeEEEEEEccC
Confidence            469999999999999999987    34578899999986532 22345677888888775      5999999887643 


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          140 -RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       140 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                       ....++||||+ +++|.+++.+... .+++..+..++.|++.||+|||+.||+||||||+||+++              
T Consensus        78 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~--------------  142 (284)
T cd05081          78 GRRNLRLVMEYLPYGSLRDYLQKHRE-RLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE--------------  142 (284)
T ss_pred             CCCceEEEEEecCCCCHHHHHHhcCc-CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC--------------
Confidence             45789999999 9999999976532 589999999999999999999999999999999999993              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCCCc------ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS------SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~------~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                .++.++|+|||++........      ...++..|+|||++.+..++.++|+||||+++|||++|..|+.
T Consensus       143 ----------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~  212 (284)
T cd05081         143 ----------SENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSC  212 (284)
T ss_pred             ----------CCCeEEECCCcccccccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCC
Confidence                      466799999998875433221      1223456999999998899999999999999999999887764


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      .... .....+.... ..+.                          ............     ........++.++.+||
T Consensus       213 ~~~~-~~~~~~~~~~-~~~~--------------------------~~~~~~~~~~~~-----~~~~~~~~~~~~~~~li  259 (284)
T cd05081         213 SPPA-EFMRMMGNDK-QGQM--------------------------IVYHLIELLKNN-----GRLPAPPGCPAEIYAIM  259 (284)
T ss_pred             Ccch-hhhhhccccc-cccc--------------------------chHHHHHHHhcC-----CcCCCCCCCCHHHHHHH
Confidence            3221 1111000000 0000                          000000000000     00112245677899999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||..||.+|||+.|+++
T Consensus       260 ~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         260 KECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHHccCChhhCCCHHHHHH
Confidence            9999999999999999976

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=100.00  E-value=3.7e-38  Score=288.05  Aligned_cols=244  Identities=22%  Similarity=0.264  Sum_probs=183.7

Q ss_pred             eeeccccceEEEEEEEcc------------CCeEEEEEEEecchh-hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           72 SKMGEGTFGRVLECWDRQ------------TQERVAIKVVRSIRK-YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~------------~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      +.||+|+||.||+|+...            ....+++|++..... ....+..|..++..+.      ||||+++++++.
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~------hp~iv~~~~~~~   74 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVS------HKHIVLLYGVCV   74 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCC------CCCEeeEEEEEe
Confidence            368999999999998532            233588998764322 2234555666666664      699999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      .....++||||+ +++|..++.+... .+++..+..++.||+.||+|||++||+||||||+|||+..++...        
T Consensus        75 ~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~--------  145 (262)
T cd05077          75 RDVENIMVEEFVEFGPLDLFMHRKSD-VLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDG--------  145 (262)
T ss_pred             cCCCCEEEEecccCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccC--------
Confidence            989999999999 8899888875432 589999999999999999999999999999999999996543110        


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhh-CCCCCCcchhHHHHHHHHHHH-hCCCCCCCCCc
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELC-TGEALFQTHEN  295 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell-~g~~Pf~~~~~  295 (399)
                               .....++++|||.+..... .....|+..|+|||.+. +..++.++|||||||++|+|+ .|..||.....
T Consensus       146 ---------~~~~~~~l~d~g~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~  215 (262)
T cd05077         146 ---------ECGPFIKLSDPGIPITVLS-RQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL  215 (262)
T ss_pred             ---------CCCceeEeCCCCCCccccC-cccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch
Confidence                     1234589999998765432 23456888999999987 467899999999999999998 58899876543


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+... +.....                                                  ......+.++.+||.+||
T Consensus       216 ~~~~~-~~~~~~--------------------------------------------------~~~~~~~~~~~~li~~cl  244 (262)
T cd05077         216 AEKER-FYEGQC--------------------------------------------------MLVTPSCKELADLMTHCM  244 (262)
T ss_pred             hHHHH-HHhcCc--------------------------------------------------cCCCCChHHHHHHHHHHc
Confidence            22211 100000                                                  001123456789999999


Q ss_pred             ccCCCCCCCHHHHhCC
Q 015867          376 RYDPSERLTARQALNH  391 (399)
Q Consensus       376 ~~dP~~R~t~~ell~h  391 (399)
                      +.||.+||++.+|+++
T Consensus       245 ~~dp~~Rp~~~~il~~  260 (262)
T cd05077         245 NYDPNQRPFFRAIMRD  260 (262)
T ss_pred             CCChhhCcCHHHHHHh
Confidence            9999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=100.00  E-value=3.7e-38  Score=288.92  Aligned_cols=248  Identities=23%  Similarity=0.388  Sum_probs=194.6

Q ss_pred             CEEEEeeeccccceEEEEEEEcc-CCeEEEEEEEecchh-----------hhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQ-TQERVAIKVVRSIRK-----------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~-----------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      .|++.+.||+|+||.||++.+.. +++.+|+|.+.....           ....+..|+.++..     ...|+|+++++
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~-----~~~h~~i~~~~   75 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKE-----QLRHPNIVRYY   75 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhh-----cCCCCCeeeEE
Confidence            38889999999999999999877 688999998853211           11223344444433     23579999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccC
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~  210 (399)
                      +++...+..++||||+ +++|.+++...  ....+++..++.++.|++.||.|||+ .|++|+||||+||++        
T Consensus        76 ~~~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~--------  147 (269)
T cd08528          76 KTFLENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIML--------  147 (269)
T ss_pred             eeEccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEE--------
Confidence            9999999999999999 88999988542  22358999999999999999999996 789999999999999        


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                                      +.++.++|+|||.+......  .....|+..|+|||.+.+..++.++|+||||+++|+|++|..
T Consensus       148 ----------------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~  211 (269)
T cd08528         148 ----------------GEDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQP  211 (269)
T ss_pred             ----------------CCCCcEEEecccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCC
Confidence                            34667999999987653332  235568999999999998889999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||...+.......+......+                                                .....++..+.
T Consensus       212 p~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~  243 (269)
T cd08528         212 PFYSTNMLSLATKIVEAVYEP------------------------------------------------LPEGMYSEDVT  243 (269)
T ss_pred             cccccCHHHHHHHHhhccCCc------------------------------------------------CCcccCCHHHH
Confidence            997665544444332211100                                                00123567789


Q ss_pred             HHHHHccccCCCCCCCHHHHhCC
Q 015867          369 DLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      +||.+||+.||.+||++.|+.++
T Consensus       244 ~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         244 DVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             HHHHHHCCCCCccCCCHHHHHHH
Confidence            99999999999999999998753

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=3.1e-38  Score=287.52  Aligned_cols=242  Identities=24%  Similarity=0.311  Sum_probs=186.9

Q ss_pred             eeeccccceEEEEEEEccCC----------eEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           72 SKMGEGTFGRVLECWDRQTQ----------ERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~----------~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      +.||+|+||.||+|.+..++          ..+++|++.........+..|+.+++.+.      |+||+++++++.. .
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~-~   73 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLS------HKHLVKLYGVCVR-D   73 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCC------CcchhheeeEEec-C
Confidence            46999999999999987766          35888887654333456667777777664      5999999998887 7


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ +++|.+++..... .++...+..++.||+.||.|||++||+|+||||+|||++.++.-            
T Consensus        74 ~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~------------  140 (259)
T cd05037          74 ENIMVEEYVKFGPLDVFLHREKN-NVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLN------------  140 (259)
T ss_pred             CcEEEEEcCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccc------------
Confidence            789999999 9999999987653 58999999999999999999999999999999999999653310            


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCC--CCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILVELCT-GEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  297 (399)
                           ......++|+|||++..... .....++..|+|||++.+.  .++.++|+||||+++|+|++ |..||...+..+
T Consensus       141 -----~~~~~~~kl~Dfg~a~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~  214 (259)
T cd05037         141 -----EGYVPFIKLSDPGIPITVLS-REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSE  214 (259)
T ss_pred             -----cCCceeEEeCCCCccccccc-ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchh
Confidence                 01233699999998876443 3345677889999999876  78999999999999999999 688887654322


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....... ..                        .+|                          ......+.+||.+||..
T Consensus       215 ~~~~~~~-~~------------------------~~~--------------------------~~~~~~~~~li~~~l~~  243 (259)
T cd05037         215 KERFYQD-QH------------------------RLP--------------------------MPDCAELANLINQCWTY  243 (259)
T ss_pred             HHHHHhc-CC------------------------CCC--------------------------CCCchHHHHHHHHHhcc
Confidence            2211110 00                        000                          01125678999999999


Q ss_pred             CCCCCCCHHHHhC
Q 015867          378 DPSERLTARQALN  390 (399)
Q Consensus       378 dP~~R~t~~ell~  390 (399)
                      ||.+|||+.++++
T Consensus       244 ~p~~Rpt~~~il~  256 (259)
T cd05037         244 DPTKRPSFRAILR  256 (259)
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=100.00  E-value=3.2e-39  Score=309.75  Aligned_cols=201  Identities=27%  Similarity=0.398  Sum_probs=174.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC---
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR---  140 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~---  140 (399)
                      .-|...+.||+|+||.||+++++.+|+.||||.++..  ....+....|++++++++|      +|||++++.-+..   
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh------~NIVk~f~iee~~~~~   86 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNH------PNIVKLFDIEETKFLG   86 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCc------hhhhhhcccCCccccC
Confidence            3478889999999999999999999999999999763  3556778899999999974      9999998866543   


Q ss_pred             ---CeEEEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          141 ---NHICIVFEKL-GPSLFDFLKRNK-YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       141 ---~~~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                         ....+||||| ||+|...+++-. ...+++.....++..+..||.|||++|||||||||.||++....         
T Consensus        87 ~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Ge---------  157 (732)
T KOG4250|consen   87 LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGE---------  157 (732)
T ss_pred             cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecC---------
Confidence               3568999999 999999997632 23699999999999999999999999999999999999995432         


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                 +.....||+|||.|+-.+  ....+++||..|.+||++.. ..|+..+|.|||||++|+++||..||..
T Consensus       158 -----------dgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  158 -----------DGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             -----------CCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence                       456678999999998744  34578899999999999995 7899999999999999999999999964

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=5.3e-39  Score=314.93  Aligned_cols=245  Identities=20%  Similarity=0.321  Sum_probs=209.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ..+-+..+.||+|+||+||+|+..     .....||||.++...  ..+..|.+|++++..|.|      +|||++++.+
T Consensus       485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H------~nIVrLlGVC  558 (774)
T KOG1026|consen  485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQH------PNIVRLLGVC  558 (774)
T ss_pred             hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccC------CCeEEEEEEE
Confidence            446788899999999999999843     345679999997533  357889999999999975      9999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC--------CCC----CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEee
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNK--------YCP----FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVS  204 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~----~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~  204 (399)
                      ..++.+|+|+||| .|+|.++|....        ...    ++..+...|+.||+.|++||-++.+|||||-..|+||  
T Consensus       559 ~~~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLV--  636 (774)
T KOG1026|consen  559 REGDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLV--  636 (774)
T ss_pred             ccCCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhcee--
Confidence            9999999999999 999999997532        122    7888999999999999999999999999999999999  


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccc-----cCCCccchhhhhCCCCCCcchhHHHHHH
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIV-----STRHYRAPEVILGLGWSYPCDMWSVGCI  279 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~-----gt~~y~aPE~~~~~~~~~~~DiwslG~i  279 (399)
                                            ..+..|||+|||+++..-...--.+     =...|||||.+....|++++||||+||+
T Consensus       637 ----------------------ge~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVv  694 (774)
T KOG1026|consen  637 ----------------------GENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVV  694 (774)
T ss_pred             ----------------------ccceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhh
Confidence                                  5688899999999876333221112     2568999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          280 LVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       280 l~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      |||+++ |..||.+..+.+++..|.+...                                                 ..
T Consensus       695 LWEIFsyG~QPy~glSn~EVIe~i~~g~l-------------------------------------------------L~  725 (774)
T KOG1026|consen  695 LWEIFSYGKQPYYGLSNQEVIECIRAGQL-------------------------------------------------LS  725 (774)
T ss_pred             hhhhhccccCcccccchHHHHHHHHcCCc-------------------------------------------------cc
Confidence            999998 9999999999999998876532                                                 12


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHH
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQA  388 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~el  388 (399)
                      -+++++.++.+|+..||+.+|.+||+++||
T Consensus       726 ~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  726 CPENCPTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             CCCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            346889999999999999999999999986

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.1e-38  Score=303.04  Aligned_cols=245  Identities=24%  Similarity=0.346  Sum_probs=204.0

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCe---E-EEEEEEec----chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQE---R-VAIKVVRS----IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~---~-vaiK~~~~----~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      +-.+.++||+|+||.||+|.....+.   . ||+|..+.    .......+..|.++++.+.      |+|||++|++..
T Consensus       158 ~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~------H~NVVr~yGVa~  231 (474)
T KOG0194|consen  158 DIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLN------HPNVVRFYGVAV  231 (474)
T ss_pred             CccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCC------CCCEEEEEEEEc
Confidence            34556899999999999998765422   3 89999873    3455677889999999986      599999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      .+..+++|||+| ||+|.++|++.+. .++......++.+.+.||+|||+++++||||-..|+|++              
T Consensus       232 ~~~Pl~ivmEl~~gGsL~~~L~k~~~-~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~--------------  296 (474)
T KOG0194|consen  232 LEEPLMLVMELCNGGSLDDYLKKNKK-SLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYS--------------  296 (474)
T ss_pred             CCCccEEEEEecCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheec--------------
Confidence            999999999999 9999999998875 599999999999999999999999999999999999994              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCCC--c-ccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNH--S-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTH  293 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~-~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~  293 (399)
                                .+..+||+|||++.......  . ...-...|+|||.+....|++++|||||||++||+++ |..||.+.
T Consensus       297 ----------~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~  366 (474)
T KOG0194|consen  297 ----------KKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGM  366 (474)
T ss_pred             ----------CCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCC
Confidence                      45568999999987654211  1 1123568999999999999999999999999999999 89999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+....|.......+                                                .+...+.++..++.+
T Consensus       367 ~~~~v~~kI~~~~~r~~------------------------------------------------~~~~~p~~~~~~~~~  398 (474)
T KOG0194|consen  367 KNYEVKAKIVKNGYRMP------------------------------------------------IPSKTPKELAKVMKQ  398 (474)
T ss_pred             CHHHHHHHHHhcCccCC------------------------------------------------CCCCCHHHHHHHHHH
Confidence            99988888854322211                                                112446677899999


Q ss_pred             ccccCCCCCCCHHHHhC
Q 015867          374 LLRYDPSERLTARQALN  390 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~  390 (399)
                      |+..||.+|||+.++.+
T Consensus       399 c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  399 CWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             hccCChhhccCHHHHHH
Confidence            99999999999998754

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=100.00  E-value=9.3e-38  Score=286.33  Aligned_cols=244  Identities=19%  Similarity=0.251  Sum_probs=183.1

Q ss_pred             eeeccccceEEEEEEEc--cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDR--QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|...  .....+|+|.+....  .....+..|+++++.+      .|+||+++++.+......++||
T Consensus         1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~h~nii~~~~~~~~~~~~~lv~   74 (269)
T cd05042           1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYREL------NHPNVLQCLGQCIESIPYLLVL   74 (269)
T ss_pred             CcCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhC------CCCCcceEEEEECCCCceEEEE
Confidence            36999999999999643  245578888775432  2233455677776665      4699999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          148 EKL-GPSLFDFLKRNKY---CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ||+ +++|.+++.....   ...++..+..++.||+.||+|||++||+||||||+|||+                     
T Consensus        75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill---------------------  133 (269)
T cd05042          75 EFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQL---------------------  133 (269)
T ss_pred             EeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEe---------------------
Confidence            999 8999999977542   235678889999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhC-------CCCCCcchhHHHHHHHHHHHh-CCCCC
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILG-------LGWSYPCDMWSVGCILVELCT-GEALF  290 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG~il~ell~-g~~Pf  290 (399)
                         +.++.++|+|||++......     .....++..|+|||++..       ..++.++|||||||++|+|++ |..||
T Consensus       134 ---~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~  210 (269)
T cd05042         134 ---TADLSVKIGDYGLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPY  210 (269)
T ss_pred             ---cCCCcEEEeccccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCC
Confidence               34667999999987542211     123345778999999753       357889999999999999999 88999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      ......+.+..+......                       .+|.                     ......++..+.++
T Consensus       211 ~~~~~~~~~~~~~~~~~~-----------------------~~~~---------------------~~~~~~~~~~~~~~  246 (269)
T cd05042         211 PDLSDEQVLKQVVREQDI-----------------------KLPK---------------------PQLDLKYSDRWYEV  246 (269)
T ss_pred             CcCCHHHHHHHHhhccCc-----------------------cCCC---------------------CcccccCCHHHHHH
Confidence            876665544443222110                       0000                     00113456777889


Q ss_pred             HHHccccCCCCCCCHHHHhC
Q 015867          371 LHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~  390 (399)
                      +..|+ .||.+|||+++|++
T Consensus       247 ~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         247 MQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             HHHHh-cCcccccCHHHHHH
Confidence            99998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=100.00  E-value=1.4e-37  Score=285.26  Aligned_cols=244  Identities=18%  Similarity=0.218  Sum_probs=183.3

Q ss_pred             eeeccccceEEEEEEEc--cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDR--QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||+|...  .++..+|+|.++...  .....+..|+.+++.+.      |+||+++++++.+....++||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~   74 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQ------HSNLLQCLGQCTEVTPYLLVM   74 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCC------CCCEeeEEEEEcCCCCcEEEE
Confidence            36899999999999754  356779999886533  22235666777777764      599999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          148 EKL-GPSLFDFLKRNKY---CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ||+ +++|.+++.....   ...++..+..++.|++.||+|||+.|++|+||||+||+++                    
T Consensus        75 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~--------------------  134 (269)
T cd05087          75 EFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT--------------------  134 (269)
T ss_pred             ECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc--------------------
Confidence            999 8999999975431   2356778889999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCC-------CCCCcchhHHHHHHHHHHHh-CCCCC
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGL-------GWSYPCDMWSVGCILVELCT-GEALF  290 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~-------~~~~~~DiwslG~il~ell~-g~~Pf  290 (399)
                          .++.++|+|||.+......     .....|+..|+|||++.+.       .++.++|+||||+++|+|++ |..||
T Consensus       135 ----~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~  210 (269)
T cd05087         135 ----ADLTVKIGDYGLSHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPY  210 (269)
T ss_pred             ----CCCcEEECCccccccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCC
Confidence                4567999999987643221     1234578889999998643       36889999999999999996 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      ...+..+...........                       .++.                     .......+..+.++
T Consensus       211 ~~~~~~~~~~~~~~~~~~-----------------------~~~~---------------------~~~~~~~~~~~~~l  246 (269)
T cd05087         211 RHLSDEQVLTYTVREQQL-----------------------KLPK---------------------PRLKLPLSDRWYEV  246 (269)
T ss_pred             CCCChHHHHHHHhhcccC-----------------------CCCC---------------------CccCCCCChHHHHH
Confidence            876554433222111000                       0000                     00011345667899


Q ss_pred             HHHccccCCCCCCCHHHHhC
Q 015867          371 LHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~  390 (399)
                      +..|+ .||.+|||++||+.
T Consensus       247 ~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         247 MQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             HHHHh-cCcccCCCHHHHHH
Confidence            99999 68999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=100.00  E-value=7.3e-38  Score=292.20  Aligned_cols=244  Identities=20%  Similarity=0.270  Sum_probs=189.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCe----EEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQE----RVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ++|++.+.||+|+||.||+|.+..++.    .||+|.+.....  ....+..|+.+++.+.      |+||+++++++..
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~------h~niv~~~~~~~~   80 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMD------HPHLVRLLGVCLS   80 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCcccEEEEEcC
Confidence            468999999999999999999877765    478888764322  2234556777776664      6999999998865


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      . ..++|+||+ +|+|.+++..... .+++..+..++.||+.||.|||++||+|+||||+||++.               
T Consensus        81 ~-~~~~v~e~~~~g~l~~~~~~~~~-~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---------------  143 (303)
T cd05110          81 P-TIQLVTQLMPHGCLLDYVHEHKD-NIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---------------  143 (303)
T ss_pred             C-CceeeehhcCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---------------
Confidence            4 567999999 8999999876543 589999999999999999999999999999999999993               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT  292 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~  292 (399)
                               .++.+||+|||++.......     ....++..|+|||.+.+..++.++||||||+++|+|++ |..||.+
T Consensus       144 ---------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~  214 (303)
T cd05110         144 ---------SPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDG  214 (303)
T ss_pred             ---------CCCceEEccccccccccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCC
Confidence                     45679999999887533221     22345678999999999999999999999999999997 9999977


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      ....+....+... ..+                                                ..++.++.++.+++.
T Consensus       215 ~~~~~~~~~~~~~-~~~------------------------------------------------~~~~~~~~~~~~li~  245 (303)
T cd05110         215 IPTREIPDLLEKG-ERL------------------------------------------------PQPPICTIDVYMVMV  245 (303)
T ss_pred             CCHHHHHHHHHCC-CCC------------------------------------------------CCCCCCCHHHHHHHH
Confidence            5543332222110 000                                                001234567889999


Q ss_pred             HccccCCCCCCCHHHHhC
Q 015867          373 GLLRYDPSERLTARQALN  390 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~  390 (399)
                      +||..||.+||++.++++
T Consensus       246 ~c~~~~p~~Rp~~~~l~~  263 (303)
T cd05110         246 KCWMIDADSRPKFKELAA  263 (303)
T ss_pred             HHcCCChhhCcCHHHHHH
Confidence            999999999999999876

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=100.00  E-value=1.4e-37  Score=283.84  Aligned_cols=239  Identities=19%  Similarity=0.276  Sum_probs=181.9

Q ss_pred             eeeccccceEEEEEEEcc---CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec-cCCeEEE
Q 015867           72 SKMGEGTFGRVLECWDRQ---TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD-YRNHICI  145 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~-~~~~~~l  145 (399)
                      +.||+|+||.||+|.+..   .+..||||.+....  .....+..|..+++.+      .|+|++++++++. .++..++
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~~~~~~~~~~l   74 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDF------SHPNVLSLLGICLPSEGSPLV   74 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccC------CCCCcceEEEEeecCCCCcEE
Confidence            368999999999998643   34679999875422  2234455666666655      4699999999664 4667899


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++.+... ..++..+..++.|++.||+|||+.+++||||||+|||++                     
T Consensus        75 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---------------------  132 (262)
T cd05058          75 VLPYMKHGDLRNFIRSETH-NPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---------------------  132 (262)
T ss_pred             EEecCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---------------------
Confidence            99999 9999999976543 467778889999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENL  296 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~  296 (399)
                         .++.+||+|||++......       .....++..|+|||.+.+..++.++||||||+++|+|++ |.+||...+..
T Consensus       133 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~  209 (262)
T cd05058         133 ---ESFTVKVADFGLARDIYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSF  209 (262)
T ss_pred             ---CCCcEEECCccccccccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHH
Confidence               4567999999987643211       123345778999999998899999999999999999999 56778765544


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....+....                       ...                          .+..++..+.+++.+||.
T Consensus       210 ~~~~~~~~~~-----------------------~~~--------------------------~~~~~~~~~~~li~~cl~  240 (262)
T cd05058         210 DITVYLLQGR-----------------------RLL--------------------------QPEYCPDPLYEVMLSCWH  240 (262)
T ss_pred             HHHHHHhcCC-----------------------CCC--------------------------CCCcCCHHHHHHHHHHcC
Confidence            4333221110                       000                          012345678899999999


Q ss_pred             cCCCCCCCHHHHhC
Q 015867          377 YDPSERLTARQALN  390 (399)
Q Consensus       377 ~dP~~R~t~~ell~  390 (399)
                      .||.+||++.++++
T Consensus       241 ~~p~~Rp~~~~il~  254 (262)
T cd05058         241 PKPEMRPTFSELVS  254 (262)
T ss_pred             CChhhCCCHHHHHH
Confidence            99999999999986

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=100.00  E-value=9.3e-38  Score=288.30  Aligned_cols=260  Identities=24%  Similarity=0.338  Sum_probs=194.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEc----cCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDR----QTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~----~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+|++.+.||+|+||.||++...    .+++.||||++.....  ....+..|+++++.+.      |+|++++++++..
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~------~~~i~~~~~~~~~   77 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLD------HENIVKYKGVCEK   77 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCC------CCChheEEeeeec
Confidence            45889999999999999999854    3488999999975443  3456777888887775      5899999998877


Q ss_pred             --CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          140 --RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       140 --~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                        ....++||||+ +++|.+++..... .+++..+..++.||+.||+|||++|++|+||||+||++              
T Consensus        78 ~~~~~~~lv~e~~~~~~l~~~l~~~~~-~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~--------------  142 (284)
T cd05038          78 PGGRSLRLIMEYLPSGSLRDYLQRHRD-QINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILV--------------  142 (284)
T ss_pred             CCCCceEEEEecCCCCCHHHHHHhCcc-ccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEE--------------
Confidence              56899999999 8999999987543 58999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                                +.++.++|+|||.+.......      ....++..|+|||.+.+..++.++|+||||+++|+|++|..||
T Consensus       143 ----------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~  212 (284)
T cd05038         143 ----------ESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPS  212 (284)
T ss_pred             ----------cCCCCEEEcccccccccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCc
Confidence                      346789999999887644221      1223456799999999889999999999999999999999998


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .........  +   .+.....                        ..............     ....+..++.++.+|
T Consensus       213 ~~~~~~~~~--~---~~~~~~~------------------------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l  258 (284)
T cd05038         213 QSPPAEFLR--M---IGIAQGQ------------------------MIVTRLLELLKEGE-----RLPRPPSCPDEVYDL  258 (284)
T ss_pred             ccccchhcc--c---ccccccc------------------------ccHHHHHHHHHcCC-----cCCCCccCCHHHHHH
Confidence            653221100  0   0000000                        00000000000000     001123456788999


Q ss_pred             HHHccccCCCCCCCHHHHhC
Q 015867          371 LHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~  390 (399)
                      +.+||+.||.+|||+.|+++
T Consensus       259 i~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         259 MKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHHhccChhhCCCHHHHHH
Confidence            99999999999999999986

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=100.00  E-value=1.1e-38  Score=320.89  Aligned_cols=252  Identities=28%  Similarity=0.400  Sum_probs=189.6

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec---
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD---  138 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~---  138 (399)
                      ...+|+.++.||+||||.||+++++-+|..||||.+...  ........+|+.++..|.|      ||||+++..|.   
T Consensus       477 Y~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnH------pNVVRYysAWVEs~  550 (1351)
T KOG1035|consen  477 YLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNH------PNVVRYYSAWVEST  550 (1351)
T ss_pred             HhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCC------cceeeeehhhhccC
Confidence            345689999999999999999999999999999999765  3444556678888888864      88888765430   


Q ss_pred             -----------------------------------------------------c--------------------------
Q 015867          139 -----------------------------------------------------Y--------------------------  139 (399)
Q Consensus       139 -----------------------------------------------------~--------------------------  139 (399)
                                                                           .                          
T Consensus       551 ~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~  630 (1351)
T KOG1035|consen  551 AELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNL  630 (1351)
T ss_pred             CccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccc
Confidence                                                                 0                          


Q ss_pred             -----------------------------C--------CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q 015867          140 -----------------------------R--------NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES  181 (399)
Q Consensus       140 -----------------------------~--------~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~  181 (399)
                                                   +        -.+||=|||| ..+|.+++.++... -....++++++||++|
T Consensus       631 S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~-~~~d~~wrLFreIlEG  709 (1351)
T KOG1035|consen  631 SNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN-SQRDEAWRLFREILEG  709 (1351)
T ss_pred             ccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc-hhhHHHHHHHHHHHHH
Confidence                                         0        1368999999 66667777766521 1477899999999999


Q ss_pred             HHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccC------------------
Q 015867          182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD------------------  243 (399)
Q Consensus       182 L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~------------------  243 (399)
                      |.|+|++|||||||||.|||+                        +.+..|||+|||++...                  
T Consensus       710 LaYIH~~giIHRDLKP~NIFL------------------------d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~  765 (1351)
T KOG1035|consen  710 LAYIHDQGIIHRDLKPRNIFL------------------------DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRA  765 (1351)
T ss_pred             HHHHHhCceeeccCCcceeEE------------------------cCCCCeeecccccchhhhhhhhhHhhccCcccccc
Confidence            999999999999999999999                        45778999999987540                  


Q ss_pred             ---CCCCcccccCCCccchhhhhCCC---CCCcchhHHHHHHHHHHHhCCCCCCC-CCcHHHHHHHHHHhCCCCHHHHHH
Q 015867          244 ---NQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEALFQT-HENLEHLAMMERALGPLPEHMIRR  316 (399)
Q Consensus       244 ---~~~~~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~ell~g~~Pf~~-~~~~~~~~~i~~~~~~~p~~~~~~  316 (399)
                         ....++.+||..|+|||++.+..   |+.|+||||||+||+||+.   ||.. .+-..++..+..+..+.|..    
T Consensus       766 g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~~~----  838 (1351)
T KOG1035|consen  766 GSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEPAD----  838 (1351)
T ss_pred             CCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCCcc----
Confidence               01224568999999999998654   9999999999999999986   4643 22223333333222222210    


Q ss_pred             hcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCcccc
Q 015867          317 ASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       317 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                                                               ...+.++. -..+|+.||+.||.+||||.|||+|.||.
T Consensus       839 -----------------------------------------f~~~~~~~-e~slI~~Ll~hdP~kRPtA~eLL~s~llp  875 (1351)
T KOG1035|consen  839 -----------------------------------------FFDPEHPE-EASLIRWLLSHDPSKRPTATELLNSELLP  875 (1351)
T ss_pred             -----------------------------------------cccccchH-HHHHHHHHhcCCCccCCCHHHHhhccCCC
Confidence                                                     01112222 25899999999999999999999999997

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-40  Score=280.34  Aligned_cols=257  Identities=23%  Similarity=0.366  Sum_probs=200.3

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +.+-+..||.|+||+|++..++.+|+..|||.++.+..  ...++..|.++...-     ...|+||++|+..-.++..+
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks-----~~cp~IVkfyGa~F~EGdcW  139 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKS-----SNCPNIVKFYGALFSEGDCW  139 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhh-----cCCcHHHHHhhhhhcCCcee
Confidence            45566789999999999999999999999999987543  334455555544332     24589999999988899999


Q ss_pred             EEEccCCCCHHHHHH---hcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          145 IVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       145 lv~e~~~~~L~~~l~---~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      +.||.|..+|..+..   .-....+++..+..|..-.+.||.||-. ..||||||||+|||+                  
T Consensus       140 iCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILl------------------  201 (361)
T KOG1006|consen  140 ICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILL------------------  201 (361)
T ss_pred             eeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEE------------------
Confidence            999999888765443   2233469999999999999999999975 579999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCCCCCCC-c
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILVELCTGEALFQTHE-N  295 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf~~~~-~  295 (399)
                            +..+.+||||||.+...-.  ..+.-+|...|||||.+...  +|+.++|+||||++|||+.||..||.+-+ .
T Consensus       202 ------dr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~sv  275 (361)
T KOG1006|consen  202 ------DRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSV  275 (361)
T ss_pred             ------ecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHH
Confidence                  5677899999998865322  23445788999999999743  69999999999999999999999998744 3


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+++.++..+..  | .+                  ..+                       ..--.++..+..||.-||
T Consensus       276 feql~~Vv~gdp--p-~l------------------~~~-----------------------~~~~~~s~~~~~fintCl  311 (361)
T KOG1006|consen  276 FEQLCQVVIGDP--P-IL------------------LFD-----------------------KECVHYSFSMVRFINTCL  311 (361)
T ss_pred             HHHHHHHHcCCC--C-ee------------------cCc-----------------------ccccccCHHHHHHHHHHh
Confidence            444444443221  1 10                  000                       011246778899999999


Q ss_pred             ccCCCCCCCHHHHhCCccccC
Q 015867          376 RYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~  396 (399)
                      .+|-+.||...+|+.+||++.
T Consensus       312 ~Kd~~~Rpky~~Lk~~~fyr~  332 (361)
T KOG1006|consen  312 IKDRSDRPKYDDLKKFPFYRM  332 (361)
T ss_pred             hcccccCcchhhhhcCchhhh
Confidence            999999999999999999875

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=100.00  E-value=9.8e-37  Score=279.53  Aligned_cols=244  Identities=19%  Similarity=0.222  Sum_probs=182.1

Q ss_pred             eeeccccceEEEEEEEccC--CeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQT--QERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~--~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +.||+|+||.||++....+  ...+++|.+....  .....+..|+.+++.+      .|+|++++++.+......|+||
T Consensus         1 ~~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~h~~iv~~~~~~~~~~~~~lv~   74 (268)
T cd05086           1 QEIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRIL------QHPNILQCLGQCVEAIPYLLVF   74 (268)
T ss_pred             CcCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhcc------CCcchhheEEEecCCCccEEEE
Confidence            3599999999999975433  3346677665432  2334566666666655      4699999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          148 EKL-GPSLFDFLKRNKY--CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||+ +++|.+++.+...  ..++...+..++.||+.||+|||+++++||||||+|||++                     
T Consensus        75 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---------------------  133 (268)
T cd05086          75 EYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---------------------  133 (268)
T ss_pred             ecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---------------------
Confidence            999 8999999986432  2467778889999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhC-------CCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILG-------LGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                         .++.++|+|||++.....     ......|+..|+|||++..       ..++.++||||||+++|+|++ |..||.
T Consensus       134 ---~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~  210 (268)
T cd05086         134 ---SDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYS  210 (268)
T ss_pred             ---CCccEEecccccccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCC
Confidence               466799999998754211     1234568899999999853       246789999999999999997 678998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+.......                       .+                     .......++..+.+++
T Consensus       211 ~~~~~~~~~~~~~~~~~~-----------------------~~---------------------~~~~~~~~~~~~~~l~  246 (268)
T cd05086         211 HLSDREVLNHVIKDQQVK-----------------------LF---------------------KPQLELPYSERWYEVL  246 (268)
T ss_pred             CCCHHHHHHHHHhhcccc-----------------------cC---------------------CCccCCCCcHHHHHHH
Confidence            766655555443221100                       00                     0001123566788999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      ..|| .||.+|||++++++
T Consensus       247 ~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         247 QFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             HHHh-hCcccCCCHHHHHH
Confidence            9999 68999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=100.00  E-value=1.5e-38  Score=288.83  Aligned_cols=295  Identities=26%  Similarity=0.428  Sum_probs=218.5

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEcc---CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQ---TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ...+.+.|.++.+||.|+|++||++.+..   .++.||+|.+..+.. ......|+++|..+.     ++.||+.+.+.+
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-p~ri~~El~~L~~~g-----G~~ni~~~~~~~  104 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-PSRILNELEMLYRLG-----GSDNIIKLNGCF  104 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-chHHHHHHHHHHHhc-----cchhhhcchhhh
Confidence            34456679999999999999999999877   788999999876433 356788999999986     578999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      ...+..++||||+ ..+..++...     ++...++.|++.++.||.++|.+|||||||||+|+|.+             
T Consensus       105 rnnd~v~ivlp~~~H~~f~~l~~~-----l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n-------------  166 (418)
T KOG1167|consen  105 RNNDQVAIVLPYFEHDRFRDLYRS-----LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYN-------------  166 (418)
T ss_pred             ccCCeeEEEecccCccCHHHHHhc-----CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccc-------------
Confidence            9999999999999 7777777763     78899999999999999999999999999999999984             


Q ss_pred             CCCCCCcccCCCCCceEEeecCCccc-----------C------CC------------------------------CCcc
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAF-----------D------NQ------------------------------NHSS  249 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~-----------~------~~------------------------------~~~~  249 (399)
                                ...+.-.|+|||++..           .      ..                              ..-.
T Consensus       167 ----------~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~an  236 (418)
T KOG1167|consen  167 ----------RRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERAN  236 (418)
T ss_pred             ----------cccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecc
Confidence                      3456667778877641           0      00                              0012


Q ss_pred             cccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCC-CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccC
Q 015867          250 IVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQ-THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR  327 (399)
Q Consensus       250 ~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~-~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~  327 (399)
                      ..||++|+|||++... ..++++||||.|||++-+++++.||- ..++.+.+..|..+.+.-.  |...+     ..+..
T Consensus       237 rAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~--mrk~A-----~l~g~  309 (418)
T KOG1167|consen  237 RAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAE--MRKCA-----ALPGR  309 (418)
T ss_pred             cCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHH--HHHHh-----hcCCc
Confidence            3699999999999876 57899999999999999999999975 4566777888877776532  22211     11111


Q ss_pred             --Ccc-cCCCCCccchHHHHHHHhh--hhhhh-----hh-hccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          328 --GSR-LNWPEGAVSRESIKAVKKL--DRLKN-----MV-SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       328 --~~~-~~~p~~~~~~~~~~~~~~~--~~~~~-----~~-~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                        .+. .++|...   +....+...  ..+.+     .. ....+-.+..+.||+.+||..||.+|+||+++|.||||..
T Consensus       310 ~~l~~ksn~~~~~---e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~  386 (418)
T KOG1167|consen  310 ILLWQKSNIPTIP---ELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDE  386 (418)
T ss_pred             eeeeccccccccH---HHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcc
Confidence              000 1111111   111111111  11111     11 1223445557899999999999999999999999999997


Q ss_pred             CCC
Q 015867          397 LNE  399 (399)
Q Consensus       397 ~~e  399 (399)
                      .+|
T Consensus       387 ~~~  389 (418)
T KOG1167|consen  387 ADR  389 (418)
T ss_pred             hhh
Confidence            653

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=100.00  E-value=4.5e-37  Score=282.24  Aligned_cols=244  Identities=17%  Similarity=0.261  Sum_probs=188.9

Q ss_pred             EEEEeeeccccceEEEEEEEc---cCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           68 YKILSKMGEGTFGRVLECWDR---QTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      |.+.+.||+|+||.||+|.+.   .+++.||||++...   ......+..|+++++.+.      |+|++++++++....
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~   74 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFD------HPNVIKLIGVSLRSR   74 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCC------CCCcceEEEEEccCC
Confidence            567889999999999999854   35789999998642   223345667777777774      599999999876432


Q ss_pred             ------eEEEEEccC-CCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccC
Q 015867          142 ------HICIVFEKL-GPSLFDFLKRNK----YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       142 ------~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~  210 (399)
                            ..+++++|+ +++|.+++....    ...++...+..++.|++.||+|||+.||+|+||||+||+++       
T Consensus        75 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~-------  147 (273)
T cd05074          75 AKGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN-------  147 (273)
T ss_pred             CCCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc-------
Confidence                  357899999 899998875321    12478899999999999999999999999999999999993       


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  285 (399)
                                       .++.++|+|||.+......     .....++..|++||.+.+..++.++||||||+++|+|++
T Consensus       148 -----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~  210 (273)
T cd05074         148 -----------------ENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMT  210 (273)
T ss_pred             -----------------CCCCEEECcccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhh
Confidence                             4667999999987653221     123345678999999999899999999999999999999


Q ss_pred             -CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          286 -GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       286 -g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                       |.+||.+.+..+....+....                       ..                          ...+.++
T Consensus       211 ~g~~p~~~~~~~~~~~~~~~~~-----------------------~~--------------------------~~~~~~~  241 (273)
T cd05074         211 RGQTPYAGVENSEIYNYLIKGN-----------------------RL--------------------------KQPPDCL  241 (273)
T ss_pred             CCCCCCCCCCHHHHHHHHHcCC-----------------------cC--------------------------CCCCCCC
Confidence             899998766544333332110                       00                          0112456


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ..+.+++.+||..+|.+|||+.++++
T Consensus       242 ~~~~~l~~~~l~~~p~~Rps~~~~~~  267 (273)
T cd05074         242 EDVYELMCQCWSPEPKCRPSFQHLRD  267 (273)
T ss_pred             HHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            77899999999999999999999876

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.8e-39  Score=291.26  Aligned_cols=266  Identities=26%  Similarity=0.443  Sum_probs=211.4

Q ss_pred             eeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhh--------HHHHHHHHHHHHhhhcCCCCCc
Q 015867           57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR--------DAAMIEIDVLQHLAKNDKGGSS  128 (399)
Q Consensus        57 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--------~~~~~e~~~l~~l~~~~~~~~~  128 (399)
                      -|.....+.++|-++..||+|||+.||+|.+....+.||+|+-.....++        +...+|..|-+.|      .||
T Consensus       454 QFkDHptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeL------DHp  527 (775)
T KOG1151|consen  454 QFKDHPTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKEL------DHP  527 (775)
T ss_pred             hhccCcchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhcc------Ccc
Confidence            45666778889999999999999999999999999999999976544443        2344566666665      569


Q ss_pred             ceeeeceeecc-CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEee
Q 015867          129 HCVQIRNWFDY-RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVS  204 (399)
Q Consensus       129 ~iv~~~~~~~~-~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~  204 (399)
                      .||++|++|.- .+.+|-|+||| |.+|.-+++.++  .+++..++.|+.||+.||.||....  |||-||||.|||+..
T Consensus       528 RIVKlYDyfslDtdsFCTVLEYceGNDLDFYLKQhk--lmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~  605 (775)
T KOG1151|consen  528 RIVKLYDYFSLDTDSFCTVLEYCEGNDLDFYLKQHK--LMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVN  605 (775)
T ss_pred             eeeeeeeeeeeccccceeeeeecCCCchhHHHHhhh--hhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEec
Confidence            99999999975 57899999999 889999999887  6999999999999999999999875  999999999999954


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC----------CcccccCCCccchhhhhCC----CCCCc
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN----------HSSIVSTRHYRAPEVILGL----GWSYP  270 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~----~~~~~  270 (399)
                      .                     ...+.+||+|||++......          ++...||-+|.+||.+.-.    ..+.+
T Consensus       606 G---------------------tacGeIKITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnK  664 (775)
T KOG1151|consen  606 G---------------------TACGEIKITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNK  664 (775)
T ss_pred             C---------------------cccceeEeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccc
Confidence            3                     35788999999998763322          2345799999999998643    47889


Q ss_pred             chhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhh
Q 015867          271 CDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD  350 (399)
Q Consensus       271 ~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  350 (399)
                      +||||+|||+|.++.|+.||........+.+-..+                    .......+|                
T Consensus       665 VDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTI--------------------lkAtEVqFP----------------  708 (775)
T KOG1151|consen  665 VDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTI--------------------LKATEVQFP----------------  708 (775)
T ss_pred             eeeEeeehhhhhhhccCCCCCCchhHHHHHhhhch--------------------hcceeccCC----------------
Confidence            99999999999999999999754332222111110                    001111222                


Q ss_pred             hhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCcccc
Q 015867          351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                              .-+.++.++.+||++||++--.+|....+|-.||||.
T Consensus       709 --------~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyll  745 (775)
T KOG1151|consen  709 --------PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLL  745 (775)
T ss_pred             --------CCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCcccc
Confidence                    2256788999999999999999999999999999985

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7e-37  Score=310.22  Aligned_cols=247  Identities=20%  Similarity=0.326  Sum_probs=204.4

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccC-----CeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQT-----QERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ...-++.+.||+|+||.||.|.....     ...||||.++..  ......+..|..++..+.      ||||+++++..
T Consensus       691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~------HpNiv~liGv~  764 (1025)
T KOG1095|consen  691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFD------HPNIVSLIGVC  764 (1025)
T ss_pred             hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCC------CcceeeEEEee
Confidence            34678899999999999999986433     234999999764  344566778888888775      59999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC-----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNK-----YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~  211 (399)
                      -+....+|++||| ||+|..+|+...     ...++......++.||+.|++||+++++|||||-..|+|++        
T Consensus       765 l~~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~--------  836 (1025)
T KOG1095|consen  765 LDSGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLD--------  836 (1025)
T ss_pred             cCCCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeec--------
Confidence            9999999999999 999999998762     23588899999999999999999999999999999999994        


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccC-CCCCcccc--c--CCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD-NQNHSSIV--S--TRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-  285 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~--g--t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-  285 (399)
                                      ....+||+|||+|+.. ........  +  ...|||||.+....++.++|||||||+|||+++ 
T Consensus       837 ----------------~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifsl  900 (1025)
T KOG1095|consen  837 ----------------ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSL  900 (1025)
T ss_pred             ----------------ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhC
Confidence                            4578999999999842 22211111  2  357999999999999999999999999999999 


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |..||...++.+++....+.                       +++..                          +..|+.
T Consensus       901 G~~PY~~~~n~~v~~~~~~g-----------------------gRL~~--------------------------P~~CP~  931 (1025)
T KOG1095|consen  901 GATPYPSRSNFEVLLDVLEG-----------------------GRLDP--------------------------PSYCPE  931 (1025)
T ss_pred             CCCCCCCcchHHHHHHHHhC-----------------------CccCC--------------------------CCCCCh
Confidence            99999999988877655432                       12222                          356788


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      .+-++|..||+.+|++||++..|++
T Consensus       932 ~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  932 KLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HHHHHHHHHccCChhhCccHHHHHh
Confidence            8899999999999999999998875

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=100.00  E-value=4.8e-36  Score=292.70  Aligned_cols=270  Identities=22%  Similarity=0.343  Sum_probs=183.1

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc----------------cCCeEEEEEEEecchh-h--------------hHHHHHHH
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR----------------QTQERVAIKVVRSIRK-Y--------------RDAAMIEI  113 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~----------------~~~~~vaiK~~~~~~~-~--------------~~~~~~e~  113 (399)
                      .++|++.++||+|+||.||+|...                ..++.||||.+..... .              ......|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            458999999999999999999742                2356799999864221 1              11223355


Q ss_pred             HHHHHhhhcCCCCCcceeeeceeecc--------CCeEEEEEccC-CCCHHHHHHhcCC---------------------
Q 015867          114 DVLQHLAKNDKGGSSHCVQIRNWFDY--------RNHICIVFEKL-GPSLFDFLKRNKY---------------------  163 (399)
Q Consensus       114 ~~l~~l~~~~~~~~~~iv~~~~~~~~--------~~~~~lv~e~~-~~~L~~~l~~~~~---------------------  163 (399)
                      .++..+.+.. ..+.+++.+++++..        .+..+|||||+ +++|.+++.....                     
T Consensus       224 ~~l~~l~~~~-l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~  302 (507)
T PLN03224        224 YMCAKIKRNP-IAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP  302 (507)
T ss_pred             HHHHHhhccc-chhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence            5666665432 234466777776643        35689999999 9999999864211                     


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCccc
Q 015867          164 -CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       164 -~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                       ..+++..++.++.|++.+|.|||+++|+||||||+|||++                        .++.++|+|||++..
T Consensus       303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~------------------------~~~~~kL~DFGla~~  358 (507)
T PLN03224        303 QDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVT------------------------VDGQVKIIDFGAAVD  358 (507)
T ss_pred             cccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEEC------------------------CCCcEEEEeCcCccc
Confidence             1245677889999999999999999999999999999993                        456799999999864


Q ss_pred             CCCC--Ccc--cccCCCccchhhhhCCC--------------------CC--CcchhHHHHHHHHHHHhCCC-CCCCCCc
Q 015867          243 DNQN--HSS--IVSTRHYRAPEVILGLG--------------------WS--YPCDMWSVGCILVELCTGEA-LFQTHEN  295 (399)
Q Consensus       243 ~~~~--~~~--~~gt~~y~aPE~~~~~~--------------------~~--~~~DiwslG~il~ell~g~~-Pf~~~~~  295 (399)
                      ....  ...  ..+|+.|+|||++....                    |+  .+.|+||+||++|+|++|.. ||.....
T Consensus       359 ~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~  438 (507)
T PLN03224        359 MCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRL  438 (507)
T ss_pred             cccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhh
Confidence            3221  122  23478999999986432                    12  24799999999999999885 7754322


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      ....  +... .. ....|......         ..                        .-...+..+....||+.+||
T Consensus       439 f~~~--~~~~-~~-~~~~~r~~~~~---------~~------------------------~~~~~d~~s~~~~dLi~~LL  481 (507)
T PLN03224        439 FNTE--LRQY-DN-DLNRWRMYKGQ---------KY------------------------DFSLLDRNKEAGWDLACKLI  481 (507)
T ss_pred             hhhH--Hhhc-cc-hHHHHHhhccc---------CC------------------------CcccccccChHHHHHHHHHh
Confidence            1110  0000 00 00000000000         00                        01123456788999999999


Q ss_pred             ccCC---CCCCCHHHHhCCccccC
Q 015867          376 RYDP---SERLTARQALNHPFFRN  396 (399)
Q Consensus       376 ~~dP---~~R~t~~ell~hp~f~~  396 (399)
                      ..+|   .+|+|++|+|+||||..
T Consensus       482 ~~~~~~~~~RlSa~eaL~Hp~f~~  505 (507)
T PLN03224        482 TKRDQANRGRLSVGQALSHRFFLP  505 (507)
T ss_pred             ccCCCCcccCCCHHHHhCCCCcCC
Confidence            9866   78999999999999964

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=100.00  E-value=1.9e-35  Score=265.55  Aligned_cols=238  Identities=37%  Similarity=0.612  Sum_probs=194.2

Q ss_pred             cceEEEEEEEccCCeEEEEEEEecchhh--hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-CCCH
Q 015867           78 TFGRVLECWDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSL  154 (399)
Q Consensus        78 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L  154 (399)
                      +||.||+|.+..+++.+|+|++......  ...+..|++.++.+      .|++++++++++......+++||++ +++|
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l------~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L   74 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKL------KHPNIVRLYDVFEDEDKLYLVMEYCDGGDL   74 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhC------CCCcHHHHHhheeeCCEEEEEEeCCCCCCH
Confidence            5899999999888999999998653322  46677788888877      4589999999999999999999999 6699


Q ss_pred             HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEE
Q 015867          155 FDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL  234 (399)
Q Consensus       155 ~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl  234 (399)
                      .+++....  .++...+..++.+++.+|.+||+.|++|+||+|+||+++                        .++.++|
T Consensus        75 ~~~~~~~~--~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~------------------------~~~~~~l  128 (244)
T smart00220       75 FDLLKKRG--RLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD------------------------EDGHVKL  128 (244)
T ss_pred             HHHHHhcc--CCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC------------------------CCCcEEE
Confidence            99998755  389999999999999999999999999999999999994                        4578999


Q ss_pred             eecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCH
Q 015867          235 IDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE-HLAMMERALGPLPE  311 (399)
Q Consensus       235 ~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~p~  311 (399)
                      +|||.+.....  ......++..|++||.+.+..++.++|+||||+++|++++|..||......+ ....+........ 
T Consensus       129 ~d~~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~-  207 (244)
T smart00220      129 ADFGLARQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFP-  207 (244)
T ss_pred             ccccceeeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCCc-
Confidence            99998876444  3455678999999999998889999999999999999999999998743333 2222221111000 


Q ss_pred             HHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          312 HMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       312 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                                                                    .....++.++.+++.+||..||.+||++.++++|
T Consensus       208 ----------------------------------------------~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~  241 (244)
T smart00220      208 ----------------------------------------------PPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQH  241 (244)
T ss_pred             ----------------------------------------------cccccCCHHHHHHHHHHccCCchhccCHHHHhhC
Confidence                                                          0001156778999999999999999999999999


Q ss_pred             ccc
Q 015867          392 PFF  394 (399)
Q Consensus       392 p~f  394 (399)
                      |||
T Consensus       242 ~~~  244 (244)
T smart00220      242 PFF  244 (244)
T ss_pred             CCC
Confidence            997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-37  Score=296.45  Aligned_cols=245  Identities=22%  Similarity=0.341  Sum_probs=215.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCC---eEEEEEEEec--chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQ---ERVAIKVVRS--IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~---~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ...|.+.||.|.||.|++|+.+..|   ..||||.++.  +.+.+..|..|..|+-++.      ||||++|.+......
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFd------HPNIIrLEGVVTks~  703 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFD------HPNIIRLEGVVTKSK  703 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCC------CCcEEEEEEEEecCc
Confidence            4688899999999999999987655   5699999985  4566777888888888775      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ...||.||| .|+|..+|+.+.. .|+..++.-+++.|+.|+.||-++|+|||||-..|||+                  
T Consensus       704 PvMIiTEyMENGsLDsFLR~~DG-qftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILV------------------  764 (996)
T KOG0196|consen  704 PVMIITEYMENGSLDSFLRQNDG-QFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILV------------------  764 (996)
T ss_pred             eeEEEhhhhhCCcHHHHHhhcCC-ceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheee------------------
Confidence            999999999 9999999998876 49999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCC----ccccc--CCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNH----SSIVS--TRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTH  293 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~g--t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~  293 (399)
                            +.+..+|++|||+++......    ++..|  ...|.|||.+....++.++||||+|++|||.++ |..||...
T Consensus       765 ------NsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdm  838 (996)
T KOG0196|consen  765 ------NSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM  838 (996)
T ss_pred             ------ccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCccccc
Confidence                  568899999999998753333    22233  468999999999999999999999999999987 99999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      .+.+++..|.+..+-+|+                                                 ..|+..+.+|+..
T Consensus       839 SNQdVIkaIe~gyRLPpP-------------------------------------------------mDCP~aL~qLMld  869 (996)
T KOG0196|consen  839 SNQDVIKAIEQGYRLPPP-------------------------------------------------MDCPAALYQLMLD  869 (996)
T ss_pred             chHHHHHHHHhccCCCCC-------------------------------------------------CCCcHHHHHHHHH
Confidence            999999999887654442                                                 4788999999999


Q ss_pred             ccccCCCCCCCHHHHhCC
Q 015867          374 LLRYDPSERLTARQALNH  391 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~h  391 (399)
                      ||++|..+||++.+|+++
T Consensus       870 CWqkdR~~RP~F~qiV~~  887 (996)
T KOG0196|consen  870 CWQKDRNRRPKFAQIVST  887 (996)
T ss_pred             HHHHHhhcCCCHHHHHHH
Confidence            999999999999998763

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-36  Score=274.01  Aligned_cols=202  Identities=22%  Similarity=0.302  Sum_probs=167.3

Q ss_pred             CCCCCceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcc
Q 015867           50 DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH  129 (399)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~  129 (399)
                      +.+....++.++..++.+.++.+.||+|.||+||+|.++  |+.||||++...  ....+.+|.+|.+..--    .|+|
T Consensus       195 SGSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~sr--dE~SWfrEtEIYqTvmL----RHEN  266 (513)
T KOG2052|consen  195 SGSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSR--DERSWFRETEIYQTVML----RHEN  266 (513)
T ss_pred             CCCCCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEeccc--chhhhhhHHHHHHHHHh----ccch
Confidence            344566778888999999999999999999999999875  677999999764  34667778888877543    5799


Q ss_pred             eeeeceeeccCC----eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-----C---CccccCCC
Q 015867          130 CVQIRNWFDYRN----HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-----L---RLIHTDLK  196 (399)
Q Consensus       130 iv~~~~~~~~~~----~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-----~---givH~Dik  196 (399)
                      |+.+++.-..++    .++||.+|. .|+|+|+|.++.   ++.....+++..++.||+|||.     +   .|.|||||
T Consensus       267 ILgFIaaD~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t---v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlK  343 (513)
T KOG2052|consen  267 ILGFIAADNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT---VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLK  343 (513)
T ss_pred             hhhhhhccccCCCceEEEEEeeecccCCcHHHHHhhcc---CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccc
Confidence            999887654432    689999999 999999999864   9999999999999999999995     2   39999999


Q ss_pred             CCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCCC---
Q 015867          197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGLG---  266 (399)
Q Consensus       197 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~---  266 (399)
                      ..|||+                        .+++.+.|+|+|+|......       .+..+||..|||||++...-   
T Consensus       344 SKNILV------------------------Kkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~  399 (513)
T KOG2052|consen  344 SKNILV------------------------KKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMK  399 (513)
T ss_pred             cccEEE------------------------ccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChh
Confidence            999999                        56888999999998653333       35679999999999997541   


Q ss_pred             ---CCCcchhHHHHHHHHHHHhC
Q 015867          267 ---WSYPCDMWSVGCILVELCTG  286 (399)
Q Consensus       267 ---~~~~~DiwslG~il~ell~g  286 (399)
                         .-..+||||||.++||+...
T Consensus       400 ~Fesyk~ADIYafgLVlWEiarR  422 (513)
T KOG2052|consen  400 HFESYKRADIYAFGLVLWEIARR  422 (513)
T ss_pred             hhhhhhHHHHHHHHHHHHHHHHH
Confidence               22468999999999998763

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4e-36  Score=283.34  Aligned_cols=243  Identities=19%  Similarity=0.323  Sum_probs=213.9

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      +..+..+||-|.||.||.+.+++-.-.||||.++.......+|..|..+++.+.|      ||+|++++.+..+..+|||
T Consensus       268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikH------pNLVqLLGVCT~EpPFYIi  341 (1157)
T KOG4278|consen  268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKH------PNLVQLLGVCTHEPPFYII  341 (1157)
T ss_pred             heeeeeccCCCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcC------ccHHHHhhhhccCCCeEEE
Confidence            4567789999999999999999888899999998877778899999999999965      9999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      .||| .|+|.++|+......++.....+++.||..|++||..+++|||||-..|.|+                       
T Consensus       342 TEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLV-----------------------  398 (1157)
T KOG4278|consen  342 TEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV-----------------------  398 (1157)
T ss_pred             EecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccc-----------------------
Confidence            9999 9999999998777678888999999999999999999999999999999999                       


Q ss_pred             CCCCCceEEeecCCcccCCCCCcc-ccc---CCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQNHSS-IVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLA  300 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~~~~~-~~g---t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~  300 (399)
                       ..+..+|++|||+++.....+-+ ..|   ...|.|||-+..+.++.++|||+|||+|||+.| |-.||.+.+...++.
T Consensus       399 -gEnhiVKvADFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~  477 (1157)
T KOG4278|consen  399 -GENHIVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYG  477 (1157)
T ss_pred             -cccceEEeeccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHH
Confidence             46788999999999886655433 233   567999999999999999999999999999998 999999988776666


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .+.+...                                                 ...+..|++.+-+|++.||+.+|+
T Consensus       478 LLEkgyR-------------------------------------------------M~~PeGCPpkVYeLMraCW~WsPs  508 (1157)
T KOG4278|consen  478 LLEKGYR-------------------------------------------------MDGPEGCPPKVYELMRACWNWSPS  508 (1157)
T ss_pred             HHhcccc-------------------------------------------------ccCCCCCCHHHHHHHHHHhcCCcc
Confidence            5544321                                                 122357888899999999999999


Q ss_pred             CCCCHHHH
Q 015867          381 ERLTARQA  388 (399)
Q Consensus       381 ~R~t~~el  388 (399)
                      +||++.|+
T Consensus       509 DRPsFaei  516 (1157)
T KOG4278|consen  509 DRPSFAEI  516 (1157)
T ss_pred             cCccHHHH
Confidence            99999987

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=100.00  E-value=7.6e-37  Score=297.47  Aligned_cols=252  Identities=24%  Similarity=0.279  Sum_probs=192.3

Q ss_pred             EEEeeeccccceE-EEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           69 KILSKMGEGTFGR-VLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        69 ~~~~~lG~G~~g~-V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      .-.+.+|.|+-|+ ||+|..  .|+.||||.+-.  ...+...+|+..|++-.     .|||||+.++.-.++.+.||..
T Consensus       512 ~~~eilG~Gs~Gt~Vf~G~y--e~R~VAVKrll~--e~~~~A~rEi~lL~eSD-----~H~NviRyyc~E~d~qF~YIal  582 (903)
T KOG1027|consen  512 SPKEILGYGSNGTVVFRGVY--EGREVAVKRLLE--EFFDFAQREIQLLQESD-----EHPNVIRYYCSEQDRQFLYIAL  582 (903)
T ss_pred             ccHHHcccCCCCcEEEEEee--CCceehHHHHhh--HhHHHHHHHHHHHHhcc-----CCCceEEEEeeccCCceEEEEe
Confidence            3346789999985 688864  578999997633  33456677888887754     6899999999999999999999


Q ss_pred             ccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          148 EKLGPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       148 e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |.|..+|.+++...  ..........+.++.|++.||+|||+.+||||||||.||||....                   
T Consensus       583 ELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~-------------------  643 (903)
T KOG1027|consen  583 ELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPS-------------------  643 (903)
T ss_pred             hHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccC-------------------
Confidence            99999999999884  111111144578999999999999999999999999999996532                   


Q ss_pred             CCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhC-CCCCCCCCcHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG-EALFQTHENLEH  298 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~Pf~~~~~~~~  298 (399)
                      .+....++|+|||+++......      .+..||-+|+|||++....-+.++|||||||++|+.++| ..||...-..+ 
T Consensus       644 ~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~-  722 (903)
T KOG1027|consen  644 ADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQ-  722 (903)
T ss_pred             CCcceeEEecccccccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhh-
Confidence            1346789999999998754433      455799999999999998888899999999999999995 99997533211 


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                       ..|......                                           +  ......+.+  ++.|||.+||.+|
T Consensus       723 -~NIl~~~~~-------------------------------------------L--~~L~~~~d~--eA~dLI~~ml~~d  754 (903)
T KOG1027|consen  723 -ANILTGNYT-------------------------------------------L--VHLEPLPDC--EAKDLISRMLNPD  754 (903)
T ss_pred             -hhhhcCccc-------------------------------------------e--eeeccCchH--HHHHHHHHhcCCC
Confidence             111111000                                           0  000011111  6789999999999


Q ss_pred             CCCCCCHHHHhCCccccCC
Q 015867          379 PSERLTARQALNHPFFRNL  397 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~  397 (399)
                      |..||+|.++|.||||..-
T Consensus       755 P~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  755 PQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             cccCCCHHHHhCCCccCCh
Confidence            9999999999999999763

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=100.00  E-value=6.3e-36  Score=280.41  Aligned_cols=257  Identities=22%  Similarity=0.300  Sum_probs=209.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+...+.++||+|-||.|.+|.-. .+..||+|+++..  ...+..+..|+++|.+|+      ||||+.+++.+..++.
T Consensus       537 Rs~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLk------hPNIveLvGVC~~DeP  609 (807)
T KOG1094|consen  537 RSRLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDATKNARNDFLKEIKILSRLK------HPNIVELLGVCVQDDP  609 (807)
T ss_pred             hhheehhhhhcCcccceeEEEEec-CceEEEEeecCcccchhHHHHHHHHHHHHhccC------CCCeeEEEeeeecCCc
Confidence            456789999999999999999753 4688999999853  345678899999999986      4999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +++|+||+ .|+|.+++..+.-..........|+.||+.|++||.+.++|||||.+.|+|+                   
T Consensus       610 icmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv-------------------  670 (807)
T KOG1094|consen  610 LCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLV-------------------  670 (807)
T ss_pred             hHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceee-------------------
Confidence            99999999 9999999998753234555667799999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh--CCCCCCCCC
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT--GEALFQTHE  294 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~--g~~Pf~~~~  294 (399)
                           +.+.++||+|||+++..-..     .+..+-...|||+|.+.-..++.++|+|+||+++||+++  ...||...+
T Consensus       671 -----~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt  745 (807)
T KOG1094|consen  671 -----DGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLT  745 (807)
T ss_pred             -----cCcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhh
Confidence                 67889999999998742222     233445789999999999999999999999999999875  889998877


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      +.+............+.                   ..+                       ...++-++..+-++|.+|
T Consensus       746 ~e~vven~~~~~~~~~~-------------------~~~-----------------------l~~P~~cp~~lyelml~C  783 (807)
T KOG1094|consen  746 DEQVVENAGEFFRDQGR-------------------QVV-----------------------LSRPPACPQGLYELMLRC  783 (807)
T ss_pred             HHHHHHhhhhhcCCCCc-------------------cee-----------------------ccCCCcCcHHHHHHHHHH
Confidence            76666555444322221                   111                       123466788889999999


Q ss_pred             cccCCCCCCCHHHHhCCccccC
Q 015867          375 LRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |..|-.+||+++++  |-+|++
T Consensus       784 w~~es~~RPsFe~l--h~~lq~  803 (807)
T KOG1094|consen  784 WRRESEQRPSFEQL--HLFLQE  803 (807)
T ss_pred             hchhhhcCCCHHHH--HHHHHH
Confidence            99999999999998  556554

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-36  Score=283.45  Aligned_cols=241  Identities=22%  Similarity=0.364  Sum_probs=199.4

Q ss_pred             EEEeeeccccceEEEEEEEccC----CeEEEEEEEec--chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           69 KILSKMGEGTFGRVLECWDRQT----QERVAIKVVRS--IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        69 ~~~~~lG~G~~g~V~~~~~~~~----~~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.++||.|-||.||+|....-    .--||||+.+.  .......+..|..+++.+.      ||||+++++.+.+ ..
T Consensus       392 tl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfd------HphIikLIGv~~e-~P  464 (974)
T KOG4257|consen  392 TLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFD------HPHIIKLIGVCVE-QP  464 (974)
T ss_pred             cHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCC------Ccchhheeeeeec-cc
Confidence            4457899999999999985322    34589999875  2334566888888888875      5999999998864 56


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++|||.+ -|.|.++++.++. .++......++.||..||.|||++.+|||||-..|||+.                  
T Consensus       465 ~WivmEL~~~GELr~yLq~nk~-sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVs------------------  525 (974)
T KOG4257|consen  465 MWIVMELAPLGELREYLQQNKD-SLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVS------------------  525 (974)
T ss_pred             eeEEEecccchhHHHHHHhccc-cchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeec------------------
Confidence            78999999 9999999998876 699999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCC--ccccc--CCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNH--SSIVS--TRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENL  296 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~g--t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~  296 (399)
                            +..++||+|||++++.....  ....|  ..-|||||-+.-.+++.++|||.|||.+||++. |..||.+-.+.
T Consensus       526 ------Sp~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNs  599 (974)
T KOG4257|consen  526 ------SPQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNS  599 (974)
T ss_pred             ------CcceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCcccccccc
Confidence                  46789999999998755442  11123  457999999999999999999999999999997 99999998887


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +++..|.++.                       ++                          +.+++|++.+-.|+.+||+
T Consensus       600 DVI~~iEnGe-----------------------Rl--------------------------P~P~nCPp~LYslmskcWa  630 (974)
T KOG4257|consen  600 DVIGHIENGE-----------------------RL--------------------------PCPPNCPPALYSLMSKCWA  630 (974)
T ss_pred             ceEEEecCCC-----------------------CC--------------------------CCCCCCChHHHHHHHHHhc
Confidence            7776665432                       22                          2346889999999999999


Q ss_pred             cCCCCCCCHHHHhC
Q 015867          377 YDPSERLTARQALN  390 (399)
Q Consensus       377 ~dP~~R~t~~ell~  390 (399)
                      +||.+||++.|+..
T Consensus       631 yeP~kRPrftei~~  644 (974)
T KOG4257|consen  631 YEPSKRPRFTEIKA  644 (974)
T ss_pred             cCcccCCcHHHHHH
Confidence            99999999888653

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=100.00  E-value=6.9e-36  Score=279.87  Aligned_cols=197  Identities=27%  Similarity=0.490  Sum_probs=175.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHH---------HHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA---------AMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~---------~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      .+|..++.+|.|+||.|++|.++.+...|+||.+.+.+.-.+.         ...|++||..++.+   .|+||++++++
T Consensus       561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~---sH~NIlKlLdf  637 (772)
T KOG1152|consen  561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKH---SHENILKLLDF  637 (772)
T ss_pred             ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhc---Cccchhhhhhe
Confidence            3699999999999999999999999999999998765433333         33499999999854   57999999999


Q ss_pred             eccCCeEEEEEccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          137 FDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       137 ~~~~~~~~lv~e~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      |++++++||+||--  |.+|+++|..++  .+++..++.|++|++.|+++||++||||||||-+||.+            
T Consensus       638 FEddd~yyl~te~hg~gIDLFd~IE~kp--~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenviv------------  703 (772)
T KOG1152|consen  638 FEDDDYYYLETEVHGEGIDLFDFIEFKP--RMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIV------------  703 (772)
T ss_pred             eecCCeeEEEecCCCCCcchhhhhhccC--ccchHHHHHHHHHHHhccccccccCceecccccccEEE------------
Confidence            99999999999988  779999999988  59999999999999999999999999999999999998            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCccc-CCCCCcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAF-DNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~-~~~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                  +.++.+||+|||++.. .+.....++||..|.|||++.|..| +..-|||+||++||.++....||.
T Consensus       704 ------------d~~g~~klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy  770 (772)
T KOG1152|consen  704 ------------DSNGFVKLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY  770 (772)
T ss_pred             ------------ecCCeEEEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence                        5678899999998765 4455678899999999999999876 577899999999999999999985

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=100.00  E-value=3.7e-35  Score=242.84  Aligned_cols=213  Identities=21%  Similarity=0.380  Sum_probs=172.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+....+..||+|+||.|-+.++..+|...|+|.++..-  ...++...|+.+...     ....|.+|.+|+.+-....
T Consensus        45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r-----~~~CPf~V~FyGa~~regd  119 (282)
T KOG0984|consen   45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMR-----TVDCPFTVHFYGALFREGD  119 (282)
T ss_pred             hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhcc-----CCCCCeEEEeehhhhcccc
Confidence            345667788999999999999999999999999986532  333444444444433     2356899999999888999


Q ss_pred             EEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      .++.||.|..+|..+-+.  .....+++..+-+|+..++.||.|||++ .++|||+||+|||+                 
T Consensus       120 vwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLI-----------------  182 (282)
T KOG0984|consen  120 VWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILI-----------------  182 (282)
T ss_pred             EEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEE-----------------
Confidence            999999998898876543  2233699999999999999999999986 79999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCC-CCC-cccccCCCccchhhhhC----CCCCCcchhHHHHHHHHHHHhCCCCCCC-
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDN-QNH-SSIVSTRHYRAPEVILG----LGWSYPCDMWSVGCILVELCTGEALFQT-  292 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~-~~~~gt~~y~aPE~~~~----~~~~~~~DiwslG~il~ell~g~~Pf~~-  292 (399)
                             +..+++|+||||.+.... ... +...|...|||||.+..    ..|+.++||||||+++.||.+++.||+. 
T Consensus       183 -------n~~GqVKiCDFGIsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w  255 (282)
T KOG0984|consen  183 -------NYDGQVKICDFGISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW  255 (282)
T ss_pred             -------ccCCcEEEcccccceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc
Confidence                   567889999999987633 222 33678899999999863    3799999999999999999999999975 


Q ss_pred             CCcHHHHHHHHHHh
Q 015867          293 HENLEHLAMMERAL  306 (399)
Q Consensus       293 ~~~~~~~~~i~~~~  306 (399)
                      .++.+++.++.+..
T Consensus       256 ~tpF~qLkqvVeep  269 (282)
T KOG0984|consen  256 GTPFQQLKQVVEEP  269 (282)
T ss_pred             CCHHHHHHHHhcCC
Confidence            66777777776643

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-35  Score=279.82  Aligned_cols=247  Identities=23%  Similarity=0.321  Sum_probs=208.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccC---CeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQT---QERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ++..+.++||+|.||.|++|.+...   ...||||.++....  .-+.|..|+.++..|+|      +|++++|+...+ 
T Consensus       110 e~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H------~hliRLyGvVl~-  182 (1039)
T KOG0199|consen  110 EQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQH------PHLIRLYGVVLD-  182 (1039)
T ss_pred             HHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccC------cceeEEeeeecc-
Confidence            3567789999999999999987532   34699999975332  45678889988888864      999999998877 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      ....+|||++ .|+|.+.|++.....|.......|+.||+.|+.||.++++|||||-..|+|+.                
T Consensus       183 qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNllla----------------  246 (1039)
T KOG0199|consen  183 QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLA----------------  246 (1039)
T ss_pred             chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheec----------------
Confidence            7889999999 99999999986666799999999999999999999999999999999999994                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCCcccc------cCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIV------STRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT  292 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~------gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~  292 (399)
                              ....+||+|||+.+..+.....++      -...|.|||.+....++.++|+|++||++|||++ |+.||.+
T Consensus       247 --------sprtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G  318 (1039)
T KOG0199|consen  247 --------SPRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVG  318 (1039)
T ss_pred             --------ccceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCC
Confidence                    356799999999887655544332      2457999999999999999999999999999998 8999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .....++..|.+..                       +                          ...++.|+.++-+++.
T Consensus       319 ~~g~qIL~~iD~~e-----------------------r--------------------------LpRPk~csedIY~imk  349 (1039)
T KOG0199|consen  319 CRGIQILKNIDAGE-----------------------R--------------------------LPRPKYCSEDIYQIMK  349 (1039)
T ss_pred             CCHHHHHHhccccc-----------------------c--------------------------CCCCCCChHHHHHHHH
Confidence            99988888775321                       1                          1233578999999999


Q ss_pred             HccccCCCCCCCHHHHhCCc
Q 015867          373 GLLRYDPSERLTARQALNHP  392 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp  392 (399)
                      .||..+|.+|||+..|.+.-
T Consensus       350 ~cWah~paDRptFsair~~~  369 (1039)
T KOG0199|consen  350 NCWAHNPADRPTFSAIREDL  369 (1039)
T ss_pred             HhccCCccccccHHHHHHhH
Confidence            99999999999999886543

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-34  Score=264.68  Aligned_cols=189  Identities=23%  Similarity=0.294  Sum_probs=156.6

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC----Ce
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR----NH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~----~~  142 (399)
                      ..++.+.||+|.||.||+|..  +++.||||++...  ....+..|.+|......    .|+||++++..-...    ..
T Consensus       211 pl~l~eli~~Grfg~V~KaqL--~~~~VAVKifp~~--~kqs~~~Ek~Iy~lp~m----~h~nIl~Fi~~ekr~t~~~~e  282 (534)
T KOG3653|consen  211 PLQLLELIGRGRFGCVWKAQL--DNRLVAVKIFPEQ--EKQSFQNEKNIYSLPGM----KHENILQFIGAEKRGTADRME  282 (534)
T ss_pred             chhhHHHhhcCccceeehhhc--cCceeEEEecCHH--HHHHHHhHHHHHhccCc----cchhHHHhhchhccCCccccc
Confidence            467889999999999999964  5689999999653  34677888888877643    789999998865543    37


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH---------CCccccCCCCCcEEEeecccccCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD---------LRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~---------~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      ++||++|. .|+|.++|..+.   +++....+++..|+.||+|||+         ..|+|||||..||||          
T Consensus       283 ywLVt~fh~kGsL~dyL~~nt---isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLv----------  349 (534)
T KOG3653|consen  283 YWLVTEFHPKGSLCDYLKANT---ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLV----------  349 (534)
T ss_pred             eeEEeeeccCCcHHHHHHhcc---ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEE----------
Confidence            99999999 999999999876   9999999999999999999996         359999999999999          


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCC-CCC-----CcchhHHHHHHHH
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGL-GWS-----YPCDMWSVGCILV  281 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~-~~~-----~~~DiwslG~il~  281 (399)
                                    ..++.+.|+|||+|.....     ..-..+||..|||||++.+. .+.     .+.||||+|.+||
T Consensus       350 --------------K~DlTccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLW  415 (534)
T KOG3653|consen  350 --------------KNDLTCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLW  415 (534)
T ss_pred             --------------ccCCcEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHH
Confidence                          4578899999999865332     22346899999999999875 222     4689999999999


Q ss_pred             HHHhCCCCC
Q 015867          282 ELCTGEALF  290 (399)
Q Consensus       282 ell~g~~Pf  290 (399)
                      ||++...-+
T Consensus       416 Ei~SRC~~~  424 (534)
T KOG3653|consen  416 EIASRCTDA  424 (534)
T ss_pred             HHHhhcccc
Confidence            999975444

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=100.00  E-value=9.4e-34  Score=303.59  Aligned_cols=186  Identities=17%  Similarity=0.255  Sum_probs=152.6

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      .|...+.||+|+||.||+|.+..+++.||+|.+.....   ....|+++++.+      .||||+++++++.+.+..++|
T Consensus       691 ~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~~l~~l------~HpnIv~~~~~~~~~~~~~lv  761 (968)
T PLN00113        691 SLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS---IPSSEIADMGKL------QHPNIVKLIGLCRSEKGAYLI  761 (968)
T ss_pred             hCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc---ccHHHHHHHhhC------CCCCcceEEEEEEcCCCCEEE
Confidence            46667889999999999999988999999998864322   122345666655      469999999999999999999


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH---DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |||+ +++|.++++     .+++..+..++.|++.||+|||   +.+|+||||||+||+++.                  
T Consensus       762 ~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~------------------  818 (968)
T PLN00113        762 HEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDG------------------  818 (968)
T ss_pred             EeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECC------------------
Confidence            9999 999999996     3889999999999999999999   679999999999999953                  


Q ss_pred             cccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                            +...++. ||....... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus       819 ------~~~~~~~-~~~~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~  880 (968)
T PLN00113        819 ------KDEPHLR-LSLPGLLCT-DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADA  880 (968)
T ss_pred             ------CCceEEE-ecccccccc-CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCc
Confidence                  3334443 444332211 1234689999999999999999999999999999999999999953

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.9e-34  Score=274.25  Aligned_cols=254  Identities=27%  Similarity=0.414  Sum_probs=206.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhh-hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY-RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ++|.++.++|+|+||.||++++..+++..|+|+++..... ..-.+.|+-+++..      .|+||+-+++.+...+.++
T Consensus        15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc------~h~nivay~gsylr~dklw   88 (829)
T KOG0576|consen   15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDC------RHPNIVAYFGSYLRRDKLW   88 (829)
T ss_pred             cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecC------CCcChHHHHhhhhhhcCcE
Confidence            5799999999999999999999999999999999764332 12233454455444      5699999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++|||| ||+|.+.-.-.+  .+++.++.+..++.+.||+|||++|=+|||||-.|||++                    
T Consensus        89 icMEycgggslQdiy~~Tg--plselqiayvcRetl~gl~ylhs~gk~hRdiKGanillt--------------------  146 (829)
T KOG0576|consen   89 ICMEYCGGGSLQDIYHVTG--PLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLT--------------------  146 (829)
T ss_pred             EEEEecCCCcccceeeecc--cchhHHHHHHHhhhhccchhhhcCCcccccccccceeec--------------------
Confidence            999999 889998776655  799999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                          ..+.+|++|||.+..+...   ...+.||++|||||+..   ...|...+|+|++|+...|+-.-++|.-......
T Consensus       147 ----d~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr  222 (829)
T KOG0576|consen  147 ----DEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMR  222 (829)
T ss_pred             ----ccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHH
Confidence                4667999999987664432   35789999999999975   4579999999999999999988888865555555


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      .+..+-+-...+|.                                             .+...+.++.|.+|++.+|..
T Consensus       223 ~l~LmTkS~~qpp~---------------------------------------------lkDk~kws~~fh~fvK~altk  257 (829)
T KOG0576|consen  223 ALFLMTKSGFQPPT---------------------------------------------LKDKTKWSEFFHNFVKGALTK  257 (829)
T ss_pred             HHHHhhccCCCCCc---------------------------------------------ccCCccchHHHHHHHHHHhcC
Confidence            44444333222221                                             111234577889999999999


Q ss_pred             CCCCCCCHHHHhCCccccC
Q 015867          378 DPSERLTARQALNHPFFRN  396 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~  396 (399)
                      ||.+|||++.+|+|||..+
T Consensus       258 npKkRptaeklL~h~fvs~  276 (829)
T KOG0576|consen  258 NPKKRPTAEKLLQHPFVSQ  276 (829)
T ss_pred             CCccCCChhhheeceeecc
Confidence            9999999999999999875

>PLN00181 protein SPA1-RELATED; Provisional

Probab=100.00  E-value=2e-33  Score=293.89  Aligned_cols=211  Identities=16%  Similarity=0.185  Sum_probs=160.2

Q ss_pred             ceeeeceeec-------cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEE
Q 015867          129 HCVQIRNWFD-------YRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENIL  201 (399)
Q Consensus       129 ~iv~~~~~~~-------~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIl  201 (399)
                      ||..++++|.       ....++++||+++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||
T Consensus        34 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiL  112 (793)
T PLN00181         34 YVRSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLDNPD-RSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFV  112 (793)
T ss_pred             HHHHhhcccCCccccccccchhhhhhccCCccHHHHHhccc-ccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEE
Confidence            5556666552       234678899999999999997543 35999999999999999999999999999999999999


Q ss_pred             EeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-------------------CCcccccCCCccchhhh
Q 015867          202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-------------------NHSSIVSTRHYRAPEVI  262 (399)
Q Consensus       202 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------------------~~~~~~gt~~y~aPE~~  262 (399)
                      |...+.+++.+|+......     .+.+..+|++|||++.....                   .....+||+.|||||++
T Consensus       113 l~~~~~~k~~d~~~~~~~~-----~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~  187 (793)
T PLN00181        113 MSSFNHVSFIESASCSDSG-----SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED  187 (793)
T ss_pred             EcccCcEEEeeccccCccc-----ccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence            9999999999886554332     13467899999998864211                   01124689999999999


Q ss_pred             hCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHH
Q 015867          263 LGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES  342 (399)
Q Consensus       263 ~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  342 (399)
                      .+..|+.++|||||||+||||++|.+|+....  .....+....  .|...                             
T Consensus       188 ~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~--~~~~~~~~~~--~~~~~-----------------------------  234 (793)
T PLN00181        188 NGSSSNCASDVYRLGVLLFELFCPVSSREEKS--RTMSSLRHRV--LPPQI-----------------------------  234 (793)
T ss_pred             ccCCCCchhhhhhHHHHHHHHhhCCCchhhHH--HHHHHHHHhh--cChhh-----------------------------
Confidence            99999999999999999999999988875321  1111111110  11100                             


Q ss_pred             HHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          343 IKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                                        ........+++.+||+.||.+|||+.|+++||||.+
T Consensus       235 ------------------~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~  270 (793)
T PLN00181        235 ------------------LLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINE  270 (793)
T ss_pred             ------------------hhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhh
Confidence                              001233468999999999999999999999999976

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.98  E-value=2.1e-33  Score=241.37  Aligned_cols=258  Identities=23%  Similarity=0.279  Sum_probs=194.6

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeece-eeccCCe
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN-WFDYRNH  142 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~-~~~~~~~  142 (399)
                      +.+.|.|.+.||+|.||.+-+|+++.++..+++|.+.........+.+|..---.|.     .|.||+.-|+ .|+..+.
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls-----~H~hIi~tY~vaFqt~d~   96 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLS-----PHQHIIDTYEVAFQTSDA   96 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeec-----cchhhhHHHHHHhhcCce
Confidence            567899999999999999999999999999999999776555566666654433333     4678887765 5788899


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ++++|||+ -|+|.+-+...+   +.+...+.++.|+++||.|||++++||||||.+||||-+.                
T Consensus        97 YvF~qE~aP~gdL~snv~~~G---igE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~----------------  157 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEAAG---IGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDA----------------  157 (378)
T ss_pred             EEEeeccCccchhhhhcCccc---ccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecC----------------
Confidence            99999999 899998877655   8999999999999999999999999999999999999653                


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCC-----CCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                            ....+||||||.+...+....-.--+..|.+||.+...     ...+.+|+|.||+++|.++||.+||......
T Consensus       158 ------df~rvKlcDFG~t~k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~  231 (378)
T KOG1345|consen  158 ------DFYRVKLCDFGLTRKVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIM  231 (378)
T ss_pred             ------CccEEEeeecccccccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhcc
Confidence                  25589999999987655544444456779999988643     3578899999999999999999999743221


Q ss_pred             HH-HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          297 EH-LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       297 ~~-~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      +. +....+-.+...                                           -........+++.+..+.++-|
T Consensus       232 d~~Y~~~~~w~~rk~-------------------------------------------~~~P~~F~~fs~~a~r~Fkk~l  268 (378)
T KOG1345|consen  232 DKPYWEWEQWLKRKN-------------------------------------------PALPKKFNPFSEKALRLFKKSL  268 (378)
T ss_pred             CchHHHHHHHhcccC-------------------------------------------ccCchhhcccCHHHHHHHHHhc
Confidence            11 111111000000                                           0011122456778889999999


Q ss_pred             ccCCCCC---CCHHHHhCCccc
Q 015867          376 RYDPSER---LTARQALNHPFF  394 (399)
Q Consensus       376 ~~dP~~R---~t~~ell~hp~f  394 (399)
                      ..+|.+|   .+++......|.
T Consensus       269 t~~~~drcki~~~kk~rk~~w~  290 (378)
T KOG1345|consen  269 TPRFKDRCKIWTAKKMRKCLWK  290 (378)
T ss_pred             CCcccccchhHHHHHHHHHHHH
Confidence            9999999   566655555554

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.98  E-value=2.3e-31  Score=268.40  Aligned_cols=246  Identities=22%  Similarity=0.389  Sum_probs=197.3

Q ss_pred             CEEEEeeeccccceEEEEEEEc---c----CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           67 RYKILSKMGEGTFGRVLECWDR---Q----TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~---~----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      +..+.+.||+|.||.|++|...   .    ....||||.++...  .....+..|+++++.+.     .|+||+.+++.+
T Consensus       297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g-----~H~niv~llG~~  371 (609)
T KOG0200|consen  297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELG-----KHPNIVNLLGAC  371 (609)
T ss_pred             hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhc-----CCcchhhheeee
Confidence            4466779999999999998732   1    25679999987533  44667888999999886     489999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC------------C--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNK------------Y--CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL  202 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~------------~--~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll  202 (399)
                      ...+..++|+||+ .|+|.++++..+            .  ..++......++.||+.|++||+++.+|||||-..|||+
T Consensus       372 t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi  451 (609)
T KOG0200|consen  372 TQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLI  451 (609)
T ss_pred             ccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEe
Confidence            9999999999999 999999998766            0  138888999999999999999999999999999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC----ccccc--CCCccchhhhhCCCCCCcchhHHH
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH----SSIVS--TRHYRAPEVILGLGWSYPCDMWSV  276 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~g--t~~y~aPE~~~~~~~~~~~Diwsl  276 (399)
                                              ..+..+||+|||+++......    ....|  ...|||||.+....|+.++||||+
T Consensus       452 ------------------------~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSf  507 (609)
T KOG0200|consen  452 ------------------------TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSF  507 (609)
T ss_pred             ------------------------cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHH
Confidence                                    456789999999998532221    11122  234999999999999999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCC-cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          277 GCILVELCT-GEALFQTHE-NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       277 G~il~ell~-g~~Pf~~~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      |++|||+++ |..||.+.. ..+....+..+.                       +.                       
T Consensus       508 GI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~-----------------------r~-----------------------  541 (609)
T KOG0200|consen  508 GILLWEIFTLGGTPYPGIPPTEELLEFLKEGN-----------------------RM-----------------------  541 (609)
T ss_pred             HHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCC-----------------------CC-----------------------
Confidence            999999999 999998744 333333333221                       11                       


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                         ..+..++.++-+++..||+.+|.+||++.++.+
T Consensus       542 ---~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~  574 (609)
T KOG0200|consen  542 ---EQPEHCSDEIYDLMKSCWNADPEDRPTFSECVE  574 (609)
T ss_pred             ---CCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence               122456888899999999999999999998865

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.97  E-value=4.5e-30  Score=225.06  Aligned_cols=180  Identities=39%  Similarity=0.628  Sum_probs=155.4

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-  150 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-  150 (399)
                      ||+|++|.||++....+++.+++|++.....  ....+..|+++++.+.+      ++++++++++......+++||++ 
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~------~~i~~~~~~~~~~~~~~~~~e~~~   74 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNH------PNIVKLYGVFEDENHLYLVMEYCE   74 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCC------CCeeeEeeeeecCCeEEEEEecCC
Confidence            6899999999999988899999999976543  24667788888888864      89999999999999999999999 


Q ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCC
Q 015867          151 GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS  230 (399)
Q Consensus       151 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (399)
                      +++|.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||++..                       .+.
T Consensus        75 ~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~-----------------------~~~  130 (215)
T cd00180          75 GGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS-----------------------DNG  130 (215)
T ss_pred             CCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC-----------------------CCC
Confidence            699999998752 25899999999999999999999999999999999999942                       156


Q ss_pred             ceEEeecCCcccCCCC---CcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHH
Q 015867          231 AIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       231 ~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~el  283 (399)
                      .++|+|||.+......   .....+...|++||.+... .++.+.|+|++|++++++
T Consensus       131 ~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l  187 (215)
T cd00180         131 KVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL  187 (215)
T ss_pred             cEEEecCCceEEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH
Confidence            7999999988765443   3445688899999999887 888999999999999998

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.97  E-value=2.2e-31  Score=258.45  Aligned_cols=241  Identities=19%  Similarity=0.236  Sum_probs=196.2

Q ss_pred             EEEEeeeccccceEEEEEEEccCC----eEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQ----ERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~----~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .+..++||+|+||+||+|.+-..|    .+||||++.....  ...++..|+-++..+.      |+|++++++++..+.
T Consensus       698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masld------Hpnl~RLLgvc~~s~  771 (1177)
T KOG1025|consen  698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLD------HPNLLRLLGVCMLST  771 (1177)
T ss_pred             hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCC------CchHHHHhhhcccch
Confidence            556789999999999999875444    4588998865433  3456666777776664      699999999887655


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                       ..||.+|+ +|+|.++++.++. .+.......|..||+.|+.|||.+++|||||-..||||.                 
T Consensus       772 -~qlvtq~mP~G~LlDyvr~hr~-~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVk-----------------  832 (1177)
T KOG1025|consen  772 -LQLVTQLMPLGCLLDYVREHRD-NIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVK-----------------  832 (1177)
T ss_pred             -HHHHHHhcccchHHHHHHHhhc-cccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeec-----------------
Confidence             88999999 9999999998765 688999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCccc---cc--CCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSI---VS--TRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHE  294 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~---~g--t~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~  294 (399)
                             +..++||+|||++.........+   .|  .+.|||-|.+....|+.++|||||||++||++| |..||.+..
T Consensus       833 -------sP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~  905 (1177)
T KOG1025|consen  833 -------SPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIP  905 (1177)
T ss_pred             -------CCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCC
Confidence                   56779999999988754443222   22  467999999999999999999999999999999 999999877


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..++-..+....                       +                          ...++.++-++--++.+|
T Consensus       906 ~~eI~dlle~ge-----------------------R--------------------------LsqPpiCtiDVy~~mvkC  936 (1177)
T KOG1025|consen  906 AEEIPDLLEKGE-----------------------R--------------------------LSQPPICTIDVYMVMVKC  936 (1177)
T ss_pred             HHHhhHHHhccc-----------------------c--------------------------CCCCCCccHHHHHHHHHH
Confidence            766544443321                       1                          123467888889999999


Q ss_pred             cccCCCCCCCHHHHh
Q 015867          375 LRYDPSERLTARQAL  389 (399)
Q Consensus       375 L~~dP~~R~t~~ell  389 (399)
                      |..|+..||+++++.
T Consensus       937 wmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  937 WMIDADSRPTFKELA  951 (1177)
T ss_pred             hccCcccCccHHHHH
Confidence            999999999999864

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.97  E-value=1.4e-29  Score=225.12  Aligned_cols=206  Identities=35%  Similarity=0.567  Sum_probs=172.7

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      |.+.+.||.|++|.||++....+++.+|+|.+.....  ....+..|++.++.+.      |+|++++++++......++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~------~~~i~~~~~~~~~~~~~~~   74 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLK------HPNIVKLYGVFEDPEPLYL   74 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCC------CCChhhheeeeecCCceEE
Confidence            5678999999999999999988899999999975432  3556777888887774      5899999999998899999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ++|++ +++|.+++..... .+++..+..++.+++.+|.+||+.+++|+||+|+||+++                     
T Consensus        75 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---------------------  132 (225)
T smart00221       75 VMEYCEGGDLFDYLRKKGG-KLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---------------------  132 (225)
T ss_pred             EEeccCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---------------------
Confidence            99999 7799999987652 188999999999999999999999999999999999993                     


Q ss_pred             cCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhh-hCCCCCCcchhHHHHHHHHHHHhCCCCCCC-CCcH-H
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVI-LGLGWSYPCDMWSVGCILVELCTGEALFQT-HENL-E  297 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~-~~~~~~~~~DiwslG~il~ell~g~~Pf~~-~~~~-~  297 (399)
                         .+..++|+|||.+.......    ....++..|++||.+ ....++.++|+|+||+++++|++|+.||.. .+.. .
T Consensus       133 ---~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~  209 (225)
T smart00221      133 ---MDGLVKLADFGLARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSL  209 (225)
T ss_pred             ---CCCCEEEeeCceeeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHH
Confidence               45789999999877654432    456788899999999 666788899999999999999999999977 4444 4


Q ss_pred             HHHHHHH
Q 015867          298 HLAMMER  304 (399)
Q Consensus       298 ~~~~i~~  304 (399)
                      ....|..
T Consensus       210 ~~~~~~~  216 (225)
T smart00221      210 LSDVWSF  216 (225)
T ss_pred             HHHHHhc
Confidence            4444443

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.97  E-value=1.7e-28  Score=230.42  Aligned_cols=215  Identities=30%  Similarity=0.373  Sum_probs=176.4

Q ss_pred             CEEEEeeeccccceEEEEEEEccCC-eEEEEEEEecchhh-hHHHHHHHHHHHHhhhcCCCCCcceeeeceee-ccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQ-ERVAIKVVRSIRKY-RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF-DYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~-~~~~~~  143 (399)
                      +|++.++||+|+||.||.|.+..++ ..+|+|+....... ...+..|..++..+..  ..+..++..+++.+ ....+.
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~--~~~~~~~~~~~~~G~~~~~~~   96 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEK--KNGPSHFPKLLDHGRSTEDFN   96 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhh--hcCCCCCCEEEEeccCCCcee
Confidence            7999999999999999999987764 67999988764322 2267889999999986  22335888888888 578899


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||+.+|.+|.++......+.++..++..++.|++.+|++||+.|++||||||+|+++...+                 
T Consensus        97 ~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~-----------------  159 (322)
T KOG1164|consen   97 FIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSS-----------------  159 (322)
T ss_pred             EEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCC-----------------
Confidence            999999999999999777666899999999999999999999999999999999999995421                 


Q ss_pred             ccCCCCCceEEeecCCcc--c----CCC------C-CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          224 RCLPKSSAIKLIDFGSTA--F----DNQ------N-HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~--~----~~~------~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                        ......++|.|||+++  .    .+.      . ...+.||..|+++....+...+.+.|+||+++++.+++.|.+||
T Consensus       160 --~~~~~~~~llDfGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW  237 (322)
T KOG1164|consen  160 --RSEVRTLYLLDFGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPW  237 (322)
T ss_pred             --CcccceEEEEecCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCC
Confidence              0112569999999997  2    110      0 12355999999999999999999999999999999999999999


Q ss_pred             CCCCcHHHHHHH
Q 015867          291 QTHENLEHLAMM  302 (399)
Q Consensus       291 ~~~~~~~~~~~i  302 (399)
                      ...........+
T Consensus       238 ~~~~~~~~~~~~  249 (322)
T KOG1164|consen  238 EALEMTDLKSKF  249 (322)
T ss_pred             ccccccchHHHH
Confidence            776654443333

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.97  E-value=9.2e-29  Score=218.51  Aligned_cols=220  Identities=25%  Similarity=0.351  Sum_probs=185.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ...|++.++||.|+||.++.|.+.-++++||||.-.. .....++..|.+..+.|..     .+.|..++.+...+.+-.
T Consensus        27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPr-kS~APQLrdEYr~YKlL~g-----~~GIP~vYYFGqeG~~Ni  100 (449)
T KOG1165|consen   27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPR-KSEAPQLRDEYRTYKLLGG-----TEGIPQVYYFGQEGKYNI  100 (449)
T ss_pred             cccceeccccccCcceeeecccccccCceEEEEeccc-cCCcchHHHHHHHHHHHcC-----CCCCCceeeeccccchhh
Confidence            4569999999999999999999999999999997643 2334567778888888873     478999999999999999


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          145 IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       145 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||++|.+|.|+..-.+. .|+...+.-++.||+.-++++|++.+|+|||||+|+||...+                  
T Consensus       101 LVidLLGPSLEDLFD~CgR-~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~------------------  161 (449)
T KOG1165|consen  101 LVIDLLGPSLEDLFDLCGR-RFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPG------------------  161 (449)
T ss_pred             hhhhhhCcCHHHHHHHhcC-cccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCC------------------
Confidence            9999999999999987765 699999999999999999999999999999999999997654                  


Q ss_pred             cCCCCCceEEeecCCcccCCC----------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC--
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQ----------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT--  292 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~--  292 (399)
                       ......+.|+|||+|+....          ...+..||..||+-....+...+...|+-|||-+++++|-|.+||.+  
T Consensus       162 -~k~~n~IhiiDFGmAK~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLK  240 (449)
T KOG1165|consen  162 -TKDANVIHIIDFGMAKEYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLK  240 (449)
T ss_pred             -CCCCceEEEEeccchhhhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCcccccc
Confidence             24566789999999976332          23467899999999999999999999999999999999999999987  


Q ss_pred             -CCcHHHHHHHHHHhCCCC
Q 015867          293 -HENLEHLAMMERALGPLP  310 (399)
Q Consensus       293 -~~~~~~~~~i~~~~~~~p  310 (399)
                       .+..+.+.+|-......|
T Consensus       241 A~tnK~kYeKIGe~Kr~T~  259 (449)
T KOG1165|consen  241 ADTNKEKYEKIGETKRSTP  259 (449)
T ss_pred             CcchHHHHHHhccccccCC
Confidence             445555666654444433

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.96  E-value=7.7e-29  Score=210.00  Aligned_cols=219  Identities=26%  Similarity=0.367  Sum_probs=180.8

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..++|+++++||+|+||.+|.|....+|..||||+-+... ....+..|..+.+.|++-     ..|+.+..++.+..+-
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a-~hpqL~yEskvY~iL~~g-----~GiP~i~~y~~e~~yn   86 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA-KHPQLLYESKVYRILQGG-----VGIPHIRHYGTEKDYN   86 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC-CCcchhHHHHHHHHhccC-----CCCchhhhhccccccc
Confidence            4578999999999999999999999999999999876543 345677799999998852     4677777888889999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      .+|||.+|.+|.++..-... .|+..++.-++-|++.-++|+|.+++|||||||+|+|+.-..                 
T Consensus        87 vlVMdLLGPsLEdLfnfC~R-~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgr-----------------  148 (341)
T KOG1163|consen   87 VLVMDLLGPSLEDLFNFCSR-RFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGR-----------------  148 (341)
T ss_pred             eeeeeccCccHHHHHHHHhh-hhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeecccc-----------------
Confidence            99999999999998875433 699999999999999999999999999999999999995332                 


Q ss_pred             ccCCCCCceEEeecCCcccCCCC----------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN----------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                          ....+.|+|||+|+.....          .....||..|++-....+...+...|+-|+|.+|.++..|.+||.+.
T Consensus       149 ----h~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQgl  224 (341)
T KOG1163|consen  149 ----HCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGL  224 (341)
T ss_pred             ----ccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCccccc
Confidence                3566899999999763322          23568999999999988888899999999999999999999999985


Q ss_pred             CcHH---HHHHHHHHhCCCC
Q 015867          294 ENLE---HLAMMERALGPLP  310 (399)
Q Consensus       294 ~~~~---~~~~i~~~~~~~p  310 (399)
                      ....   ...+|.+.....|
T Consensus       225 ka~tk~QKyEkI~EkK~s~~  244 (341)
T KOG1163|consen  225 KAATKKQKYEKISEKKMSTP  244 (341)
T ss_pred             chhhHHHHHHHHHHhhcCCC
Confidence            5443   4445555444443

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.96  E-value=2.8e-29  Score=215.23  Aligned_cols=167  Identities=24%  Similarity=0.288  Sum_probs=126.9

Q ss_pred             CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCc
Q 015867          152 PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA  231 (399)
Q Consensus       152 ~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (399)
                      |+|.+++...+. .+++..++.++.||+.||+|||+++      ||+|||++                        .++.
T Consensus         1 GsL~~~l~~~~~-~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~------------------------~~~~   49 (176)
T smart00750        1 VSLADILEVRGR-PLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT------------------------WDGL   49 (176)
T ss_pred             CcHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc------------------------Cccc
Confidence            689999986542 5999999999999999999999999      99999984                        4566


Q ss_pred             eEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCC
Q 015867          232 IKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL-EHLAMMERALGPLP  310 (399)
Q Consensus       232 ~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~p  310 (399)
                      +++  ||++......  ...||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+..+........
T Consensus        50 ~~~--fG~~~~~~~~--~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~  125 (176)
T smart00750       50 LKL--DGSVAFKTPE--QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADD  125 (176)
T ss_pred             eee--ccceEeeccc--cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCC
Confidence            777  9987764433  236899999999999999999999999999999999999999764432 22222222111000


Q ss_pred             HHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh--HHHHHHHHccccCCCCCCCHHHH
Q 015867          311 EHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS--TLTDLLHGLLRYDPSERLTARQA  388 (399)
Q Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~li~~~L~~dP~~R~t~~el  388 (399)
                                             +..                    ......++.  ++.+||.+||..||.+|||+.|+
T Consensus       126 -----------------------~~~--------------------~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~l  162 (176)
T smart00750      126 -----------------------PRD--------------------RSNLESVSAARSFADFMRVCASRLPQRREAANHY  162 (176)
T ss_pred             -----------------------ccc--------------------cccHHHHHhhhhHHHHHHHHHhcccccccCHHHH
Confidence                                   000                    000112233  58899999999999999999999


Q ss_pred             hCCccccC
Q 015867          389 LNHPFFRN  396 (399)
Q Consensus       389 l~hp~f~~  396 (399)
                      ++|+|+..
T Consensus       163 l~~~~~~~  170 (176)
T smart00750      163 LAHCRALF  170 (176)
T ss_pred             HHHHHHHH
Confidence            99999753

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.96  E-value=5.6e-29  Score=223.99  Aligned_cols=248  Identities=18%  Similarity=0.186  Sum_probs=190.3

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccC-----CeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQT-----QERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      -..|+++.-.+-+|.||.||.|.++..     .+.|.+|.++....  +-..+..|.-      ......|+|+..+.+.
T Consensus       282 ~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~------lly~~sH~nll~V~~V  355 (563)
T KOG1024|consen  282 QRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESM------LLYGASHPNLLSVLGV  355 (563)
T ss_pred             hhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHH------HHhcCcCCCccceeEE
Confidence            356788889999999999999976533     23355555532211  1111222222      2334468999998887


Q ss_pred             ecc-CCeEEEEEccC-CCCHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          137 FDY-RNHICIVFEKL-GPSLFDFLKRN------KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       137 ~~~-~~~~~lv~e~~-~~~L~~~l~~~------~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      ..+ ....++++.++ -|+|..++...      .-+.++..+...++.|++.|++|||+.|+||.||-..|.+|      
T Consensus       356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvI------  429 (563)
T KOG1024|consen  356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVI------  429 (563)
T ss_pred             EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhccee------
Confidence            654 56788889999 78999999832      22347777888999999999999999999999999999999      


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCccccc-----CCCccchhhhhCCCCCCcchhHHHHHHHHHH
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVS-----TRHYRAPEVILGLGWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~g-----t~~y~aPE~~~~~~~~~~~DiwslG~il~el  283 (399)
                                        +....+||+|=.+++..-...-...|     ...|||||.+....|+.++|+|||||+||||
T Consensus       430 ------------------dd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWEL  491 (563)
T KOG1024|consen  430 ------------------DDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWEL  491 (563)
T ss_pred             ------------------hhheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHH
Confidence                              44678999998888764333322223     5689999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh
Q 015867          284 CT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR  362 (399)
Q Consensus       284 l~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (399)
                      +| |+.||...++.|+...+..+.                       ++.-|                          -+
T Consensus       492 mtlg~~PyaeIDPfEm~~ylkdGy-----------------------RlaQP--------------------------~N  522 (563)
T KOG1024|consen  492 MTLGKLPYAEIDPFEMEHYLKDGY-----------------------RLAQP--------------------------FN  522 (563)
T ss_pred             HhcCCCCccccCHHHHHHHHhccc-----------------------eecCC--------------------------CC
Confidence            98 999999999988887776543                       22222                          37


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          363 ARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       363 ~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      |++++-.++..||+.+|++||+.+|++.
T Consensus       523 CPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  523 CPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             CcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            8999999999999999999999999864

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.95  E-value=5e-29  Score=248.56  Aligned_cols=263  Identities=22%  Similarity=0.333  Sum_probs=194.7

Q ss_pred             CCE-EEEeeeccccceEEEEEEEccCCeEEEEEEEe----cchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           66 PRY-KILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        66 ~~y-~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~----~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +.| .....+|.|++|.|+.+......+.++.|.++    ......+.   ...+..++.......|+|++..+..+.+.
T Consensus       317 ~~y~~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~---~~~i~sE~~i~~~l~h~~~~e~l~~~~~~  393 (601)
T KOG0590|consen  317 EKYGKPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKY---NYNITSEFCIGSSLSHPNIIETLDIVQEI  393 (601)
T ss_pred             cccCCccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHH---hhhhhhheeecccccCCchhhhHHHHhhc
Confidence            445 56678999999988888877777667777654    21111111   11266666666677889988877776665


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          141 NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       141 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ....-+||||.++|+.++.+.+  .+....+..++.|++.|+.|||++||.|||+|++|+++.                 
T Consensus       394 ~~~~~~mE~~~~Dlf~~~~~~~--~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~-----------------  454 (601)
T KOG0590|consen  394 DGILQSMEYCPYDLFSLVMSNG--KLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT-----------------  454 (601)
T ss_pred             ccchhhhhcccHHHHHHHhccc--ccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe-----------------
Confidence            5555559999339999999874  488899999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCC-------CCCcccccCCCccchhhhhCCCCCC-cchhHHHHHHHHHHHhCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDN-------QNHSSIVSTRHYRAPEVILGLGWSY-PCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~-~~DiwslG~il~ell~g~~Pf~~  292 (399)
                             .++.+||+|||.+....       ......+|+..|+|||++.+..|++ .+||||.|++++.|++|+.||..
T Consensus       455 -------~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~  527 (601)
T KOG0590|consen  455 -------ENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKV  527 (601)
T ss_pred             -------cCCceEEeecCcceeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccc
Confidence                   46689999999765421       1234678999999999999999986 58999999999999999999976


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      ....+...  ....                       ...|-                ............++...+.+|.
T Consensus       528 a~~~~~~~--~~~~-----------------------~~~~~----------------~~~~~~~~~~~~lp~~~~~~~~  566 (601)
T KOG0590|consen  528 AKKSDNSF--KTNN-----------------------YSDQR----------------NIFEGPNRLLSLLPRETRIIIY  566 (601)
T ss_pred             ccccccch--hhhc-----------------------ccccc----------------ccccChHHHHHhchhhHHHHHH
Confidence            54432211  0000                       00000                0000011222456777899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||++||.+|.|+++|++.+||+.++
T Consensus       567 ~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  567 RMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHccCChhheecHHHHhhChHhhhcc
Confidence            99999999999999999999999875

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.94  E-value=3.2e-28  Score=232.35  Aligned_cols=237  Identities=26%  Similarity=0.412  Sum_probs=195.1

Q ss_pred             eccccceEEEEEE---EccCCeEEEEEEEecchhh---hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           74 MGEGTFGRVLECW---DRQTQERVAIKVVRSIRKY---RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        74 lG~G~~g~V~~~~---~~~~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      +|+|+||.|++++   ....+..||+|+.++....   ......|..++....     .++.++++...|+.+...++++
T Consensus         2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~-----~~~f~v~lhyafqt~~kl~l~l   76 (612)
T KOG0603|consen    2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVH-----NTPFLVKLHYAFQTDGKLYLIL   76 (612)
T ss_pred             CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhcc-----CCCceeeeeeeeccccchhHhh
Confidence            7999999999865   2355788999998653211   113344666666665     4689999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      ++. |+.|+..+....  .+.+...+.+...++.+++++|+.||+|||+|++||++                        
T Consensus        77 d~~rgg~lft~l~~~~--~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enill------------------------  130 (612)
T KOG0603|consen   77 DFLRGGDLFTRLSKEV--MFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLL------------------------  130 (612)
T ss_pred             hhcccchhhhccccCC--chHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceee------------------------
Confidence            999 889998887665  58888999999999999999999999999999999998                        


Q ss_pred             CCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHh
Q 015867          227 PKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL  306 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~  306 (399)
                      +.+|++++.|||+++..-..... |||..|||||++.  ....++|+||+|+++++|+||..||.+    ++...|.+..
T Consensus       131 d~~Ghi~~tdfglske~v~~~~~-cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~  203 (612)
T KOG0603|consen  131 LLEGHIKLTDFGLSKEAVKEKIA-CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAE  203 (612)
T ss_pred             cccCccccCCchhhhHhHhhhhc-ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhc
Confidence            56778999999988764333222 9999999999998  678899999999999999999999987    6666666655


Q ss_pred             CCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCH-
Q 015867          307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA-  385 (399)
Q Consensus       307 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~-  385 (399)
                      ...|.                                                  ..+..+++++..++..||..|... 
T Consensus       204 ~~~p~--------------------------------------------------~l~~~a~~~~~~l~~r~p~nrLg~~  233 (612)
T KOG0603|consen  204 LEMPR--------------------------------------------------ELSAEARSLFRQLFKRNPENRLGAG  233 (612)
T ss_pred             cCCch--------------------------------------------------hhhHHHHHHHHHHHhhCHHHHhccC
Confidence            44444                                                  446667899999999999999864 


Q ss_pred             ----HHHhCCccccCCC
Q 015867          386 ----RQALNHPFFRNLN  398 (399)
Q Consensus       386 ----~ell~hp~f~~~~  398 (399)
                          .|+++|+||+.++
T Consensus       234 ~~~~~eik~h~f~~~i~  250 (612)
T KOG0603|consen  234 PDGVDEIKQHEFFQSID  250 (612)
T ss_pred             cchhHHHhccchheeee
Confidence                6999999999875

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.94  E-value=6e-27  Score=234.07  Aligned_cols=221  Identities=31%  Similarity=0.514  Sum_probs=167.0

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ...+|..++.|-.|+||.||.++++.+.+.+|+|+-+.+           -|++.  +....+.|.+|            
T Consensus        81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~-----------lilRn--ilt~a~npfvv------------  135 (1205)
T KOG0606|consen   81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN-----------LILRN--ILTFAGNPFVV------------  135 (1205)
T ss_pred             CccccceeEeeccCCCCceeeeeccccccchhhcccccc-----------hhhhc--cccccCCccee------------
Confidence            345799999999999999999999999999999653221           12221  11111122222            


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                              |+=...++..+  .++...        +.+++|||+.||||||+||+|++|+.                   
T Consensus       136 --------gDc~tllk~~g--~lPvdm--------vla~Eylh~ygivhrdlkpdnllIT~-------------------  178 (1205)
T KOG0606|consen  136 --------GDCATLLKNIG--PLPVDM--------VLAVEYLHSYGIVHRDLKPDNLLITS-------------------  178 (1205)
T ss_pred             --------chhhhhcccCC--CCcchh--------hHHhHhhccCCeecCCCCCCcceeee-------------------
Confidence                    44445555544  344332        78899999999999999999999965                   


Q ss_pred             ccCCCCCceEEeecCCcccCCCC------------------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN------------------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  285 (399)
                           -+++|++|||+++.....                  ....+||+.|.|||++..++|+..+|+|++|+|+|+.+.
T Consensus       179 -----mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLV  253 (1205)
T KOG0606|consen  179 -----MGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLV  253 (1205)
T ss_pred             -----cccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHhe
Confidence                 556777788765431110                  124589999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |..||.+.+..+.+.++....+                        .||+..                       ..++.
T Consensus       254 gcvpffGdtpeelfg~visd~i------------------------~wpE~d-----------------------ea~p~  286 (1205)
T KOG0606|consen  254 GCVPFFGDTPEELFGQVISDDI------------------------EWPEED-----------------------EALPP  286 (1205)
T ss_pred             eeeeccCCCHHHHHhhhhhhhc------------------------cccccC-----------------------cCCCH
Confidence            9999999999888887766543                        355422                       35678


Q ss_pred             HHHHHHHHccccCCCCCC---CHHHHhCCccccCCC
Q 015867          366 TLTDLLHGLLRYDPSERL---TARQALNHPFFRNLN  398 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~---t~~ell~hp~f~~~~  398 (399)
                      +++++|.++|+.||..|.   ++-++.+|+||+.++
T Consensus       287 Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD  322 (1205)
T KOG0606|consen  287 EAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD  322 (1205)
T ss_pred             HHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence            889999999999999997   467899999999875

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.93  E-value=7.3e-24  Score=198.25  Aligned_cols=255  Identities=34%  Similarity=0.514  Sum_probs=195.3

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      |.+.+.||.|+||.||.+.+.   ..+++|.+.....    ....+..|..++..+.+     +++++.+.+.+......
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~-----~~~i~~~~~~~~~~~~~   73 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNH-----PPNIVKLYDFFQDEGSL   73 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccC-----CcceeeEEEEEecCCEE
Confidence            788999999999999999877   6789999865332    24556777777777764     22799999999777789


Q ss_pred             EEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKY-CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +++++++ ++++.+++..... ..++...+..++.|++.+|.++|+.|++|||+||+||++..                 
T Consensus        74 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~-----------------  136 (384)
T COG0515          74 YLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR-----------------  136 (384)
T ss_pred             EEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC-----------------
Confidence            9999999 8999977766532 15899999999999999999999999999999999999943                 


Q ss_pred             CcccCCCCC-ceEEeecCCcccCCC---------CCcccccCCCccchhhhhC---CCCCCcchhHHHHHHHHHHHhCCC
Q 015867          222 PFRCLPKSS-AIKLIDFGSTAFDNQ---------NHSSIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       222 ~~~~~~~~~-~~kl~Dfg~a~~~~~---------~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~g~~  288 (399)
                             .. .++++|||.+.....         ......||..|+|||.+.+   ..++...|+||+|++++++++|..
T Consensus       137 -------~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~  209 (384)
T COG0515         137 -------DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLP  209 (384)
T ss_pred             -------CCCeEEEeccCcceecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCC
Confidence                   34 699999998764322         2356789999999999988   578999999999999999999999


Q ss_pred             CCCCCCc----HHHHHHHHHHhCC-CCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhh
Q 015867          289 LFQTHEN----LEHLAMMERALGP-LPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA  363 (399)
Q Consensus       289 Pf~~~~~----~~~~~~i~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (399)
                      ||.....    ......+.....+ ....                    ...                      ......
T Consensus       210 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~----------------------~~~~~~  247 (384)
T COG0515         210 PFEGEKNSSATSQTLKIILELPTPSLASP--------------------LSP----------------------SNPELI  247 (384)
T ss_pred             CCCCCCccccHHHHHHHHHhcCCcccccc--------------------cCc----------------------cccchh
Confidence            9877664    2222222222111 0000                    000                      000122


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          364 RSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       364 ~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ...+.+++.+++..+|..|.+..+...++|...
T Consensus       248 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~  280 (384)
T COG0515         248 SKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAH  280 (384)
T ss_pred             hHHHHHHHHHHHhcCchhcCCHHHHhhchHhhC
Confidence            356789999999999999999998888766554

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.93  E-value=5.2e-25  Score=206.73  Aligned_cols=160  Identities=19%  Similarity=0.181  Sum_probs=122.4

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEcc-CCeEEEEEEEecc------hhhhHHHHHHHHHHHHhhhcCCCCCccee-ee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQ-TQERVAIKVVRSI------RKYRDAAMIEIDVLQHLAKNDKGGSSHCV-QI  133 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv-~~  133 (399)
                      ..+.++|.+.+.||+|+||+||+|++.. +++.||||+....      ......+..|+++++.+.|      ++++ .+
T Consensus        14 ~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h------~~iv~~l   87 (365)
T PRK09188         14 PALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRG------IGVVPQL   87 (365)
T ss_pred             ccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccC------CCCCcEE
Confidence            3456789999999999999999998776 6788899986432      1234557889999999864      6666 44


Q ss_pred             ceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC-CCCcEEEeecccccCC
Q 015867          134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDL-KPENILLVSSEFIKLP  211 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Di-kp~NIll~~~~~~~~~  211 (399)
                      +.+    +..|+||||+ |++|.. +.  .   ..   ...++.|++.+|.|||++||+|||| ||+|||++        
T Consensus        88 ~~~----~~~~LVmE~~~G~~L~~-~~--~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~--------  146 (365)
T PRK09188         88 LAT----GKDGLVRGWTEGVPLHL-AR--P---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG--------  146 (365)
T ss_pred             EEc----CCcEEEEEccCCCCHHH-hC--c---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc--------
Confidence            432    4579999999 888863 21  1   11   1467899999999999999999999 99999993        


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----------cccccCCCccchhhhhC
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----------SSIVSTRHYRAPEVILG  264 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----------~~~~gt~~y~aPE~~~~  264 (399)
                                      .++.++|+|||++.......           .+..+++.|+|||.+..
T Consensus       147 ----------------~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        147 ----------------PDGEAAVIDFQLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             ----------------CCCCEEEEECccceecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence                            45679999999987532211           34568889999999864

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.91  E-value=2e-23  Score=188.00  Aligned_cols=204  Identities=21%  Similarity=0.286  Sum_probs=127.4

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhh----hHHHHHHHHHHHHhhhcCCC----CCcc------eee
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY----RDAAMIEIDVLQHLAKNDKG----GSSH------CVQ  132 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~e~~~l~~l~~~~~~----~~~~------iv~  132 (399)
                      .+...+.||.|+++.||.+.+..+++.+|+|++......    -+.+..|.-....+......    .+-.      +++
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~   92 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR   92 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence            367788999999999999999999999999998643211    12222222122111110000    0001      111


Q ss_pred             ece---eeccC---C-----eEEEEEccCCCCHHHHHHh---cCCC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 015867          133 IRN---WFDYR---N-----HICIVFEKLGPSLFDFLKR---NKYC--PFPVDLVREFGRQLLESVAYMHDLRLIHTDLK  196 (399)
Q Consensus       133 ~~~---~~~~~---~-----~~~lv~e~~~~~L~~~l~~---~~~~--~~~~~~~~~i~~qi~~~L~~lH~~givH~Dik  196 (399)
                      +.+   ++...   .     ..+++|+-+.++|.+++..   ....  .+.......+..|++..+++||+.|+||+|||
T Consensus        93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~  172 (288)
T PF14531_consen   93 IPGKPPFFERGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIK  172 (288)
T ss_dssp             ETTS-SEEEECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-S
T ss_pred             EcCCCcceecCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccc
Confidence            110   11111   1     2478899888899887642   2211  12222334567999999999999999999999


Q ss_pred             CCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCC--------CCC
Q 015867          197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL--------GWS  268 (399)
Q Consensus       197 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~--------~~~  268 (399)
                      |+|+|+                        +.++.++|+||+.....+........+..|.+||.....        .++
T Consensus       173 ~~nfll------------------------~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t  228 (288)
T PF14531_consen  173 PENFLL------------------------DQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYT  228 (288)
T ss_dssp             GGGEEE-------------------------TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-
T ss_pred             eeeEEE------------------------cCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceee
Confidence            999999                        457889999998766554433323456789999987542        478


Q ss_pred             CcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          269 YPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       269 ~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                      .+.|.|+||+++|.+++|..||....
T Consensus       229 ~~~DaW~LG~~ly~lWC~~lPf~~~~  254 (288)
T PF14531_consen  229 FATDAWQLGITLYSLWCGRLPFGLSS  254 (288)
T ss_dssp             HHHHHHHHHHHHHHHHHSS-STCCCG
T ss_pred             eccCHHHHHHHHHHHHHccCCCCCCC
Confidence            89999999999999999999997543

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=2.7e-23  Score=188.11  Aligned_cols=188  Identities=23%  Similarity=0.337  Sum_probs=142.7

Q ss_pred             CCCcceeeeceeecc---------------------------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHH
Q 015867          125 GGSSHCVQIRNWFDY---------------------------RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQ  177 (399)
Q Consensus       125 ~~~~~iv~~~~~~~~---------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~q  177 (399)
                      ..|||||.+..+|.+                           ...+|+||..+..+|.+++..+.   .+....+-++.|
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~tLr~yl~~~~---~s~r~~~~~laQ  349 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQTLREYLWTRH---RSYRTGRVILAQ  349 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhhHHHHHhcCC---CchHHHHHHHHH
Confidence            479999999887743                           23679999999999999998765   677778889999


Q ss_pred             HHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC---------CCc
Q 015867          178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ---------NHS  248 (399)
Q Consensus       178 i~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---------~~~  248 (399)
                      +++|+.|||.+||.|||+|.+|||+.-++                    |.-..+.++|||.+-....         ..-
T Consensus       350 lLEav~hL~~hgvAhRDlKSDNiL~Eldd--------------------D~~P~LVvaDFGCcLAd~~hGlqlpy~S~~V  409 (598)
T KOG4158|consen  350 LLEAVTHLHKHGVAHRDLKSDNILLELDD--------------------DEIPQLVVADFGCCLADDNHGLQLPYESDEV  409 (598)
T ss_pred             HHHHHHHHHHccchhhcccccceEEEecC--------------------CCCcEEEEcccceeeeccccccccccccccc
Confidence            99999999999999999999999995443                    4556689999997643222         112


Q ss_pred             ccccCCCccchhhhhCCC------CCCcchhHHHHHHHHHHHhCCCCCCCCCcHH--HHHHHHHHhCCCCHHHHHHhccc
Q 015867          249 SIVSTRHYRAPEVILGLG------WSYPCDMWSVGCILVELCTGEALFQTHENLE--HLAMMERALGPLPEHMIRRASRG  320 (399)
Q Consensus       249 ~~~gt~~y~aPE~~~~~~------~~~~~DiwslG~il~ell~g~~Pf~~~~~~~--~~~~i~~~~~~~p~~~~~~~~~~  320 (399)
                      ...|....||||+....+      --.++|.|+.|.+.||++....||.+....-  ...--...+              
T Consensus       410 d~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qL--------------  475 (598)
T KOG4158|consen  410 DLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQL--------------  475 (598)
T ss_pred             cCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhC--------------
Confidence            345788999999987543      1257999999999999999999997633211  100000000              


Q ss_pred             ccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCH
Q 015867          321 TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA  385 (399)
Q Consensus       321 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~  385 (399)
                                                          ...++.+++.+++|+..+|+.||++|+++
T Consensus       476 ------------------------------------Palp~~vpp~~rqlV~~lL~r~pskRvsp  504 (598)
T KOG4158|consen  476 ------------------------------------PALPSRVPPVARQLVFDLLKRDPSKRVSP  504 (598)
T ss_pred             ------------------------------------CCCcccCChHHHHHHHHHhcCCccccCCc
Confidence                                                11234678889999999999999999984

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.89  E-value=3.8e-23  Score=180.88  Aligned_cols=170  Identities=12%  Similarity=0.146  Sum_probs=124.7

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhH----------HHHHHHHHHHHhhhcCCCCCcceee
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----------AAMIEIDVLQHLAKNDKGGSSHCVQ  132 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~----------~~~~e~~~l~~l~~~~~~~~~~iv~  132 (399)
                      .+.++|++++.||.|+||.||++..  ++..+|||+++.......          .+..|++.+..+.+      ++|..
T Consensus        28 ~l~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~------~GI~~   99 (232)
T PRK10359         28 FLSYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRS------EGLAS   99 (232)
T ss_pred             HhhCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHH------CCCCc
Confidence            4578999999999999999999754  466799999964221111          24678778888865      66666


Q ss_pred             eceeecc--------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 015867          133 IRNWFDY--------RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLV  203 (399)
Q Consensus       133 ~~~~~~~--------~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~  203 (399)
                      +.+++..        .+..+|||||+ |.+|.++..      +++    ....+++.+|..||+.|++|||+||+||+++
T Consensus       100 ~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~------~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~  169 (232)
T PRK10359        100 LNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPE------ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVS  169 (232)
T ss_pred             ceEeeeecccccccccCCeEEEEEEECCccHHHhhh------ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEe
Confidence            6665443        24689999999 789988732      333    3466999999999999999999999999994


Q ss_pred             ecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHH
Q 015867          204 SSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  283 (399)
                      .                        ++ ++|+|||..........         ...+.....|+.++|+||||+++..+
T Consensus       170 ~------------------------~g-i~liDfg~~~~~~e~~a---------~d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        170 K------------------------NG-LRIIDLSGKRCTAQRKA---------KDRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             C------------------------CC-EEEEECCCcccccchhh---------HHHHHHHhHhcccccccceeEeehHH
Confidence            3                        44 99999997654321111         01133445677899999999998765


Q ss_pred             H
Q 015867          284 C  284 (399)
Q Consensus       284 l  284 (399)
                      .
T Consensus       216 ~  216 (232)
T PRK10359        216 K  216 (232)
T ss_pred             H
Confidence            4

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.89  E-value=8.9e-24  Score=211.82  Aligned_cols=244  Identities=23%  Similarity=0.329  Sum_probs=172.8

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .|...+.||++.|=+|.+|++. .|. |+||++-+..  ..-..+..+++-++    .....+||++.+--+...+...|
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik----~~l~~~pn~lPfqk~~~t~kAAy   97 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK----FALMKAPNCLPFQKVLVTDKAAY   97 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH----HHhhcCCcccchHHHHHhhHHHH
Confidence            6888999999999999999764 344 8999985432  11122222222222    22235699999887777788889


Q ss_pred             EEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          145 IVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       145 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||-+|...+|+|.+..+.  -+...+.+.|+.||+.||.-+|..||+|||||.+||||++                    
T Consensus        98 lvRqyvkhnLyDRlSTRP--FL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS--------------------  155 (1431)
T KOG1240|consen   98 LVRQYVKHNLYDRLSTRP--FLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS--------------------  155 (1431)
T ss_pred             HHHHHHhhhhhhhhccch--HHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee--------------------
Confidence            999999889999998776  4788888999999999999999999999999999999954                    


Q ss_pred             cCCCCCceEEeecCCccc--C---C-CCCccccc----CCCccchhhhhCC----------C-CCCcchhHHHHHHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAF--D---N-QNHSSIVS----TRHYRAPEVILGL----------G-WSYPCDMWSVGCILVEL  283 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~--~---~-~~~~~~~g----t~~y~aPE~~~~~----------~-~~~~~DiwslG~il~el  283 (399)
                          -.=+.|+||..=+.  .   + ...+-+..    -..|.|||.+...          + .+++-||||+||+++||
T Consensus       156 ----WNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaEL  231 (1431)
T KOG1240|consen  156 ----WNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAEL  231 (1431)
T ss_pred             ----echhhhhcccccCCccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHH
Confidence                33478888875332  1   1 11112222    3479999998642          2 67889999999999999


Q ss_pred             Hh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh
Q 015867          284 CT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR  362 (399)
Q Consensus       284 l~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (399)
                      ++ |++||.-    .++-.........+......+                                             
T Consensus       232 f~Eg~PlF~L----SQL~aYr~~~~~~~e~~Le~I---------------------------------------------  262 (1431)
T KOG1240|consen  232 FLEGRPLFTL----SQLLAYRSGNADDPEQLLEKI---------------------------------------------  262 (1431)
T ss_pred             HhcCCCcccH----HHHHhHhccCccCHHHHHHhC---------------------------------------------
Confidence            98 8999952    222222111111111111111                                             


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          363 ARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       363 ~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      .+..++++|..|++.||++|++|++.|+-
T Consensus       263 ed~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  263 EDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             cCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            12356899999999999999999999864

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.88  E-value=1.1e-22  Score=207.40  Aligned_cols=199  Identities=25%  Similarity=0.373  Sum_probs=159.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ...|.|.+.||.|+||+||+|.... |+.||||+-+....+  .+..-.+++.+|+-   .-.+.|..+...+...+..+
T Consensus       697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W--EfYI~~q~~~RLk~---~~~~~~~~~~~a~~~~~~S~  770 (974)
T KOG1166|consen  697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW--EFYICLQVMERLKP---QMLPSIMHISSAHVFQNASV  770 (974)
T ss_pred             ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce--eeeehHHHHHhhch---hhhcchHHHHHHHccCCcce
Confidence            4579999999999999999998766 999999997654433  33334455555541   01145666666677788899


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ||+||. .|+|.+++...+  .+++..+..+..||+..+++||.++|||+||||+|+||...-..               
T Consensus       771 lv~ey~~~Gtlld~~N~~~--~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~---------------  833 (974)
T KOG1166|consen  771 LVSEYSPYGTLLDLINTNK--VMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICA---------------  833 (974)
T ss_pred             eeeeccccccHHHhhccCC--CCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCC---------------
Confidence            999999 999999998555  69999999999999999999999999999999999999542211               


Q ss_pred             ccCCCCCceEEeecCCccc-----CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          224 RCLPKSSAIKLIDFGSTAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                        .+.+..++|+|||.+..     .+......++|-.+-.+|+..|.+++..+|.|.|+.+++.||.|+.
T Consensus       834 --~~~~~~l~lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  834 --DSDSKGLYLIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             --CCcccceEEEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence              12367799999998754     1223355678999999999999999999999999999999999963

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.88  E-value=2e-22  Score=174.12  Aligned_cols=137  Identities=20%  Similarity=0.224  Sum_probs=101.7

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecchhh---------------------------hHHHHHHHHHHHHhhhcC
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY---------------------------RDAAMIEIDVLQHLAKND  123 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~e~~~l~~l~~~~  123 (399)
                      .+.||+|+||.||+|.+. +|+.||||+++.....                           ......|.+++..+.+..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05147           2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG   80 (190)
T ss_pred             CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence            467999999999999886 8999999999753210                           011234888888887532


Q ss_pred             CCCCcceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HHCCccccCCCCCcEE
Q 015867          124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM-HDLRLIHTDLKPENIL  201 (399)
Q Consensus       124 ~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~l-H~~givH~Dikp~NIl  201 (399)
                      . ..|+++.      . ...+|||||+ |+++...+....  .++...+..++.|++.+|.++ |+.||+||||||+|||
T Consensus        81 v-~~p~~~~------~-~~~~iVmE~i~g~~l~~~~~~~~--~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIl  150 (190)
T cd05147          81 I-PCPEPIL------L-KSHVLVMEFIGDDGWAAPRLKDA--PLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLL  150 (190)
T ss_pred             C-CCCcEEE------e-cCCEEEEEEeCCCCCcchhhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEE
Confidence            2 2333321      1 1238999999 555554433333  589999999999999999999 7999999999999999


Q ss_pred             EeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccC
Q 015867          202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD  243 (399)
Q Consensus       202 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  243 (399)
                      ++                         ++.++|+|||+|...
T Consensus       151 i~-------------------------~~~v~LiDFG~a~~~  167 (190)
T cd05147         151 YH-------------------------DGKLYIIDVSQSVEH  167 (190)
T ss_pred             EE-------------------------CCcEEEEEccccccC
Confidence            94                         346999999998643

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.88  E-value=9.4e-22  Score=168.52  Aligned_cols=182  Identities=17%  Similarity=0.166  Sum_probs=135.7

Q ss_pred             EEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhH-----HHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD-----AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        69 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~-----~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      -+...|++|+||+||.+..  .+..++.+.+.....+..     .+..|+++++.|.+     ++++++++++    +..
T Consensus         5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~-----~~~vP~ll~~----~~~   73 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDG-----LPRTPRLLHW----DGR   73 (218)
T ss_pred             ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCC-----CCCCCEEEEE----cCE
Confidence            3567899999999997754  667788777654433222     46789999999864     3567777765    447


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC-CCCcEEEeecccccCCCCcCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDL-KPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Di-kp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +++|+|+ |.+|.+.+..        . ...++.|++.+|.++|++||+|||| ||+|||++                  
T Consensus        74 ~lvmeyI~G~~L~~~~~~--------~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~------------------  126 (218)
T PRK12274         74 HLDRSYLAGAAMYQRPPR--------G-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ------------------  126 (218)
T ss_pred             EEEEeeecCccHHhhhhh--------h-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc------------------
Confidence            9999999 8888754321        1 1357889999999999999999999 79999993                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCCc----------------ccccCCCccchhhhhCC-CCC-CcchhHHHHHHHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNHS----------------SIVSTRHYRAPEVILGL-GWS-YPCDMWSVGCILVEL  283 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~~----------------~~~gt~~y~aPE~~~~~-~~~-~~~DiwslG~il~el  283 (399)
                            .++.++|+|||++........                -...++.|++|+...-. ..+ ...++++.|+-+|.+
T Consensus       127 ------~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~  200 (218)
T PRK12274        127 ------EDGSPAVIDFQLAVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRF  200 (218)
T ss_pred             ------CCCCEEEEECCCceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHH
Confidence                  456799999999875443221                01247788888865433 333 667999999999999


Q ss_pred             HhCCCCCCCCC
Q 015867          284 CTGEALFQTHE  294 (399)
Q Consensus       284 l~g~~Pf~~~~  294 (399)
                      +|+..|..+.+
T Consensus       201 ~~~~~~~~~~~  211 (218)
T PRK12274        201 VTRRVLHWEDN  211 (218)
T ss_pred             HhccCCccccC
Confidence            99999886544

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.87  E-value=2.5e-21  Score=167.82  Aligned_cols=137  Identities=19%  Similarity=0.143  Sum_probs=100.6

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecchhh---------------------------hHHHHHHHHHHHHhhhcC
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY---------------------------RDAAMIEIDVLQHLAKND  123 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---------------------------~~~~~~e~~~l~~l~~~~  123 (399)
                      .+.||+|+||.||+|.+. +|+.||||+++.....                           ......|.+.+..+.+..
T Consensus         2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~   80 (190)
T cd05145           2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG   80 (190)
T ss_pred             CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence            468999999999999887 8999999998753210                           111245777788876532


Q ss_pred             CCCCcceeeeceeeccCCeEEEEEccC-CCCHHH-HHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcE
Q 015867          124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENI  200 (399)
Q Consensus       124 ~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~-~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NI  200 (399)
                      .    .++..+..  .  ..+|||||+ |+++.. .+.. .  .++...+..++.|++.+|.+||+ .||+||||||+||
T Consensus        81 i----~~p~~~~~--~--~~~lVmE~~~g~~~~~~~l~~-~--~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NI  149 (190)
T cd05145          81 V----PVPEPILL--K--KNVLVMEFIGDDGSPAPRLKD-V--PLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNI  149 (190)
T ss_pred             C----CCceEEEe--c--CCEEEEEEecCCCchhhhhhh-c--cCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhE
Confidence            1    11222221  1  248999999 554433 3433 2  47888999999999999999999 9999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCC
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN  244 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  244 (399)
                      |++                         ++.++|+|||++....
T Consensus       150 ll~-------------------------~~~~~liDFG~a~~~~  168 (190)
T cd05145         150 LYH-------------------------DGKPYIIDVSQAVELD  168 (190)
T ss_pred             EEE-------------------------CCCEEEEEcccceecC
Confidence            993                         4569999999986543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>PRK10345 hypothetical protein; Provisional

Probab=99.86  E-value=8.5e-21  Score=165.56  Aligned_cols=139  Identities=20%  Similarity=0.201  Sum_probs=108.7

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecc-hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC---e-EEE
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSI-RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN---H-ICI  145 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~---~-~~l  145 (399)
                      .+.||+|+||.||.  +..++.. +||++... .........|+.+++.+.+ ....||||++++++++++.   . +.+
T Consensus         7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~-~~~~h~nIvr~yg~~et~~g~g~v~~~   82 (210)
T PRK10345          7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSR-RLIDWSGIPRYYGTVETDCGTGYVYDV   82 (210)
T ss_pred             cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhc-cCCCCcccceeeEEEEeCCCCeEEEEE
Confidence            46799999999995  5666655 69988653 2234668889999999976 3457899999999998863   4 347


Q ss_pred             EEccC---CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHH-HHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          146 VFEKL---GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV-AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       146 v~e~~---~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L-~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ||||+   +++|.+++.+.   .+++.  ..++.|++.++ +|||+++||||||||+|||++..+               
T Consensus        83 I~e~~G~~~~tL~~~l~~~---~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~---------------  142 (210)
T PRK10345         83 IADFDGKPSITLTEFAEQC---RYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRIS---------------  142 (210)
T ss_pred             EecCCCCcchhHHHHHHcc---cccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccC---------------
Confidence            89995   58999999764   36665  35688888888 999999999999999999996532               


Q ss_pred             CcccCCCCCceEEeecC
Q 015867          222 PFRCLPKSSAIKLIDFG  238 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg  238 (399)
                           +.+..++|+||+
T Consensus       143 -----~~~~~~~LiDg~  154 (210)
T PRK10345        143 -----ESEVIPVVCDNI  154 (210)
T ss_pred             -----CCCCcEEEEECC
Confidence                 235589999954

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.84  E-value=2.1e-21  Score=167.77  Aligned_cols=240  Identities=15%  Similarity=0.189  Sum_probs=178.7

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEec---chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +..++-+|.....|+.|++++..+.  ++.|++..   +......+..|.-.|+      ...||||+.+++.+.....+
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqgnd--ivakil~vr~~t~risrdfneefp~lr------ifshpnilpvlgacnsppnl  262 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQGND--IVAKILNVREVTARISRDFNEEFPALR------IFSHPNILPVLGACNSPPNL  262 (448)
T ss_pred             hhhhhhhhccCCCcccccccccCcc--hhhhhhhhhhcchhhcchhhhhCccee------eecCCchhhhhhhccCCCCc
Confidence            4567788999999999999886554  66777643   2222233444444444      44679999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .++..|| .++|+.++.....--++..++.+++.+|+.|++|||+..  |----|....++++++-              
T Consensus       263 v~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedl--------------  328 (448)
T KOG0195|consen  263 VIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDL--------------  328 (448)
T ss_pred             eEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchh--------------
Confidence            9999999 999999998877656788899999999999999999986  43446788889985432              


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCC---CcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWS---YPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                              ...+.++|--++.   +. ....-.|.||+||.+...+-+   .++|+|||++++||+.|...||..-.+.+
T Consensus       329 --------tarismad~kfsf---qe-~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspme  396 (448)
T KOG0195|consen  329 --------TARISMADTKFSF---QE-VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPME  396 (448)
T ss_pred             --------hhheecccceeee---ec-cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchh
Confidence                    2222333322221   11 122347899999999877543   57999999999999999999999888877


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      .-.+|.-                                                +.+....++.++..+..|++-|+.-
T Consensus       397 cgmkial------------------------------------------------eglrv~ippgis~hm~klm~icmne  428 (448)
T KOG0195|consen  397 CGMKIAL------------------------------------------------EGLRVHIPPGISRHMNKLMNICMNE  428 (448)
T ss_pred             hhhhhhh------------------------------------------------ccccccCCCCccHHHHHHHHHHhcC
Confidence            6555422                                                1222234467888999999999999


Q ss_pred             CCCCCCCHHHH
Q 015867          378 DPSERLTARQA  388 (399)
Q Consensus       378 dP~~R~t~~el  388 (399)
                      ||.+||.+..+
T Consensus       429 dpgkrpkfdmi  439 (448)
T KOG0195|consen  429 DPGKRPKFDMI  439 (448)
T ss_pred             CCCcCCCccee
Confidence            99999988765

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.83  E-value=6.8e-21  Score=179.05  Aligned_cols=176  Identities=29%  Similarity=0.418  Sum_probs=132.4

Q ss_pred             CeEEEEEccC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRN-KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .++|+.|++| ..+|.+||.+. .....+......++.|++.|+.|   +|.+|+|+||.||++.               
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---------------  390 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---------------  390 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---------------
Confidence            3689999999 99999999743 33357788899999999999999   9999999999999983               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCC---------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQ---------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEA  288 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~  288 (399)
                               .+..+||.|||+......         ..+..+||..||+||++.+..|+.++||||||+||+|+++ -..
T Consensus       391 ---------~d~q~kIgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T  461 (516)
T KOG1033|consen  391 ---------DDDQLKIGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFST  461 (516)
T ss_pred             ---------cchhhhhhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhcc
Confidence                     355799999998654222         2355689999999999999999999999999999999998 333


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      .|...   .....+.  .+.+|+.++.                                              +++. -.
T Consensus       462 ~~er~---~t~~d~r--~g~ip~~~~~----------------------------------------------d~p~-e~  489 (516)
T KOG1033|consen  462 QFERI---ATLTDIR--DGIIPPEFLQ----------------------------------------------DYPE-EY  489 (516)
T ss_pred             HHHHH---Hhhhhhh--cCCCChHHhh----------------------------------------------cCcH-HH
Confidence            33211   1111111  1223322211                                              1111 24


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCcccc
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      +|+.+||...|.+||++.+.-.|+|.+
T Consensus       490 ~ll~~lls~~p~~RP~~~~~~~~~~~~  516 (516)
T KOG1033|consen  490 TLLQQLLSPSPEERPSAIEVALHEFLQ  516 (516)
T ss_pred             HHHHHhcCCCcccCchHHHHhhhhhcC
Confidence            899999999999999988888888863

>smart00090 RIO RIO-like kinase

Probab=99.82  E-value=5.1e-20  Score=164.54  Aligned_cols=141  Identities=21%  Similarity=0.160  Sum_probs=107.1

Q ss_pred             EEEEeeeccccceEEEEEE-EccCCeEEEEEEEecchh-------------------------hhHHHHHHHHHHHHhhh
Q 015867           68 YKILSKMGEGTFGRVLECW-DRQTQERVAIKVVRSIRK-------------------------YRDAAMIEIDVLQHLAK  121 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~-~~~~~~~vaiK~~~~~~~-------------------------~~~~~~~e~~~l~~l~~  121 (399)
                      |.+.+.||+|+||.||+|. +..+|+.||||+++....                         .......|.+++..+.+
T Consensus        30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~  109 (237)
T smart00090       30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE  109 (237)
T ss_pred             HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence            8899999999999999998 667899999999874321                         01224578889988874


Q ss_pred             cCCCCCcceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC-ccccCCCCCc
Q 015867          122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR-LIHTDLKPEN  199 (399)
Q Consensus       122 ~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g-ivH~Dikp~N  199 (399)
                      .    ...++.++.+    ...++||||+ |.+|........  .+....+..++.||+.+|++||+.| |+|+||||+|
T Consensus       110 ~----~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~N  179 (237)
T smart00090      110 A----GVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV--EPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYN  179 (237)
T ss_pred             c----CCCCCeeeEe----cCceEEEEEecCCcccccccccC--CcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhh
Confidence            2    1233344432    2358999999 667766543332  3666677899999999999999999 9999999999


Q ss_pred             EEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccC
Q 015867          200 ILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD  243 (399)
Q Consensus       200 Ill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  243 (399)
                      |+++                         ++.++|+|||.+...
T Consensus       180 Ili~-------------------------~~~i~LiDFg~a~~~  198 (237)
T smart00090      180 ILVH-------------------------DGKVVIIDVSQSVEL  198 (237)
T ss_pred             EEEE-------------------------CCCEEEEEChhhhcc
Confidence            9993                         456999999987643

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.78  E-value=3.3e-18  Score=150.93  Aligned_cols=133  Identities=24%  Similarity=0.288  Sum_probs=103.1

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch---------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +.||+|++|.||+|..  .|..+++|+.....         ........|..++..+.+      ++++....++...+.
T Consensus         2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------~~i~~p~~~~~~~~~   73 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARK------AGVNVPAVYFVDPEN   73 (211)
T ss_pred             cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHH------CCCCCCeEEEEeCCC
Confidence            5799999999999976  56679999864311         112346678888888865      344333334445677


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ |++|.+++....     . ....++.+++.+|.+||+.|++|+|++|+|||+.                  
T Consensus        74 ~~lv~e~~~G~~L~~~~~~~~-----~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~------------------  129 (211)
T PRK14879         74 FIIVMEYIEGEPLKDLINSNG-----M-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS------------------  129 (211)
T ss_pred             CEEEEEEeCCcCHHHHHHhcc-----H-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE------------------
Confidence            89999999 899999987533     2 7788999999999999999999999999999993                  


Q ss_pred             CcccCCCCCceEEeecCCcccC
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFD  243 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~  243 (399)
                             ++.++|+|||.+...
T Consensus       130 -------~~~~~liDf~~a~~~  144 (211)
T PRK14879        130 -------GGKIYLIDFGLAEFS  144 (211)
T ss_pred             -------CCCEEEEECCcccCC
Confidence                   456899999988753

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.74  E-value=1.7e-17  Score=144.90  Aligned_cols=135  Identities=24%  Similarity=0.245  Sum_probs=100.4

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-----------------------hhHHHHHHHHHHHHhhhcCC
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-----------------------YRDAAMIEIDVLQHLAKNDK  124 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------------------~~~~~~~e~~~l~~l~~~~~  124 (399)
                      |.+.+.||+|+||.||++... +|+.||||+++....                       .......|..++..+.+.. 
T Consensus        17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~-   94 (198)
T cd05144          17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG-   94 (198)
T ss_pred             hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC-
Confidence            888899999999999999864 789999998764210                       0112455777777775521 


Q ss_pred             CCCcceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 015867          125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLV  203 (399)
Q Consensus       125 ~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~  203 (399)
                         ..++..++    ....++||||+ |++|......        .....++.+++.++.++|+.||+|+||||+||++ 
T Consensus        95 ---i~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~--------~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill-  158 (198)
T cd05144          95 ---FPVPKPID----WNRHAVVMEYIDGVELYRVRVL--------EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILV-  158 (198)
T ss_pred             ---CCCCceee----cCCceEEEEEeCCcchhhcccc--------ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEE-
Confidence               12333332    24558999999 8888765321        3356788999999999999999999999999999 


Q ss_pred             ecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccC
Q 015867          204 SSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD  243 (399)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  243 (399)
                                             +.++.++|+|||.+...
T Consensus       159 -----------------------~~~~~~~liDfg~~~~~  175 (198)
T cd05144         159 -----------------------DDDEKIYIIDWPQMVST  175 (198)
T ss_pred             -----------------------cCCCcEEEEECCccccC
Confidence                                   34678999999988543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.74  E-value=3.3e-17  Score=143.24  Aligned_cols=128  Identities=21%  Similarity=0.240  Sum_probs=97.2

Q ss_pred             eeccccceEEEEEEEccCCeEEEEEEEecch---------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIR---------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        73 ~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      .||+|+||.||++..  ++..+++|......         ........|.+++..+.+..    -+++.++.  ...+..
T Consensus         1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~----i~~p~~~~--~~~~~~   72 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAG----VNTPVVYD--VDPDNK   72 (199)
T ss_pred             CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCC----CCCCEEEE--EECCCC
Confidence            389999999999973  56789999864311         11244567888998887632    12333333  345567


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ |++|.+++....   .      .++.|++.+|.+||+.|++|+|+||.||++.                   
T Consensus        73 ~lv~e~~~g~~l~~~~~~~~---~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-------------------  124 (199)
T TIGR03724        73 TIVMEYIEGKPLKDVIEEGN---D------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-------------------  124 (199)
T ss_pred             EEEEEEECCccHHHHHhhcH---H------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-------------------
Confidence            8999999 999998876532   1      7899999999999999999999999999993                   


Q ss_pred             cccCCCCCceEEeecCCccc
Q 015867          223 FRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~  242 (399)
                            ++.++++|||.+..
T Consensus       125 ------~~~~~liDfg~a~~  138 (199)
T TIGR03724       125 ------DDKLYLIDFGLGKY  138 (199)
T ss_pred             ------CCcEEEEECCCCcC
Confidence                  45699999998765

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.74  E-value=1.9e-19  Score=179.98  Aligned_cols=256  Identities=23%  Similarity=0.338  Sum_probs=188.7

Q ss_pred             CEEEEeeeccccceEEEEEEEc-cCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           67 RYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .|.+.+.||+|+|+.|-.+... .....+|.|.+.....   .......|..+-+.+.     .|.|++.+++...+.+.
T Consensus        21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s-----~h~n~~~~~~~~~~~~~   95 (601)
T KOG0590|consen   21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLS-----KHSNTVHMIEPSSSPRS   95 (601)
T ss_pred             cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCcccccccccc-----ccccccccCCccCCCcc
Confidence            4888888999999999887653 3344566665543321   1122222433333333     28899999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH-DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH-~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .++++++. |+++++.+........+...+..++.|+..+|.|+| ..++.|+||||+|.+++.                
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~----------------  159 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE----------------  159 (601)
T ss_pred             cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc----------------
Confidence            99999999 999998884222224777888899999999999999 999999999999999843                


Q ss_pred             CCcccCCCCC-ceEEeecCCcccCCC-C-----Cccccc-CCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          221 MPFRCLPKSS-AIKLIDFGSTAFDNQ-N-----HSSIVS-TRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       221 ~~~~~~~~~~-~~kl~Dfg~a~~~~~-~-----~~~~~g-t~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                              .+ ..++.|||+|..... .     ....+| ++.|+|||...+. ...+..|+||.|+++.-+++|..|+.
T Consensus       160 --------s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~  231 (601)
T KOG0590|consen  160 --------SGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWD  231 (601)
T ss_pred             --------CCCcccCCCchhhccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcc
Confidence                    44 799999999876443 1     134578 9999999999985 56788999999999999999999997


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ........                              ...|.+..               .......+...+....+++
T Consensus       232 ~~~~~~~~------------------------------~~~~~~~~---------------~~~~~~~~~~~~~~~~~~l  266 (601)
T KOG0590|consen  232 FPSRKDGR------------------------------YSSWKSNK---------------GRFTQLPWNSISDQAHDLL  266 (601)
T ss_pred             cccccccc------------------------------ceeecccc---------------cccccCccccCChhhhhcc
Confidence            54432210                              00111100               0011223345677788999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      .+++..+|..|.+.+++..+||+..
T Consensus       267 ~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  267 HKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             cccccCCchhccccccccccccccc
Confidence            9999999999999999999999987

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.73  E-value=6.1e-17  Score=162.30  Aligned_cols=143  Identities=22%  Similarity=0.205  Sum_probs=106.2

Q ss_pred             eeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEec-c-h-------hhhHHHHHHHHHHHHhhhcCCCCC
Q 015867           57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS-I-R-------KYRDAAMIEIDVLQHLAKNDKGGS  127 (399)
Q Consensus        57 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~-~-~-------~~~~~~~~e~~~l~~l~~~~~~~~  127 (399)
                      .+.........|...+.||+|+||+||++.....+  +++|+... . .       .....+..|+++++.+.+      
T Consensus       324 ~~~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~------  395 (535)
T PRK09605        324 TWIKEEEVKRRKIPDHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARR------  395 (535)
T ss_pred             eeccccccccccCccceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcc------
Confidence            34444444556678899999999999998765443  44443211 1 0       112446678888888865      


Q ss_pred             cceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       128 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                      ++++....+.......++||||+ |++|.+++.          ....++.|++.+|.+||+.|++||||||+|||+.   
T Consensus       396 ~~i~~p~~~~~~~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~---  462 (535)
T PRK09605        396 AGVPTPVIYDVDPEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR---  462 (535)
T ss_pred             cCCCeeEEEEEeCCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE---
Confidence            55555444555566788999999 999999875          2457899999999999999999999999999992   


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCccc
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                                            ++.++|+|||++..
T Consensus       463 ----------------------~~~~~liDFGla~~  476 (535)
T PRK09605        463 ----------------------DDRLYLIDFGLGKY  476 (535)
T ss_pred             ----------------------CCcEEEEeCccccc
Confidence                                  45699999999864

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.72  E-value=4.1e-17  Score=156.38  Aligned_cols=196  Identities=20%  Similarity=0.267  Sum_probs=148.0

Q ss_pred             CCCcceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-cccCCCCCcEEE
Q 015867          125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL-IHTDLKPENILL  202 (399)
Q Consensus       125 ~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~gi-vH~Dikp~NIll  202 (399)
                      ..|.|+.++++...++...+.|.+|| -|+|.+.+.... ..++......++++|+.||+|||...| +|+.++..|.++
T Consensus         4 l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~-~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClv   82 (484)
T KOG1023|consen    4 LDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED-IKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLV   82 (484)
T ss_pred             cchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc-cCccHHHHHHHHHHHHHHHHHHhcCcceeeeeecccccee
Confidence            35789999999999999999999999 999999998743 368888999999999999999998876 899999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCC---C----CCCc
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGL---G----WSYP  270 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~---~----~~~~  270 (399)
                                              +..-.+||+|||+......     ......-...|.|||.+.+.   .    .+.+
T Consensus        83 ------------------------d~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~  138 (484)
T KOG1023|consen   83 ------------------------DSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQK  138 (484)
T ss_pred             ------------------------eeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhccccccccccccccc
Confidence                                    4567799999998765432     11122234579999999764   1    4677


Q ss_pred             chhHHHHHHHHHHHhCCCCCCCCCc----HHHHHHHHH-HhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHH
Q 015867          271 CDMWSVGCILVELCTGEALFQTHEN----LEHLAMMER-ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA  345 (399)
Q Consensus       271 ~DiwslG~il~ell~g~~Pf~~~~~----~~~~~~i~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  345 (399)
                      .|+||+|++++|+++...||.....    .+....+.. ...++-+.+                                
T Consensus       139 gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i--------------------------------  186 (484)
T KOG1023|consen  139 GDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSI--------------------------------  186 (484)
T ss_pred             CCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcch--------------------------------
Confidence            9999999999999999999976322    234444433 110010000                                


Q ss_pred             HHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHh
Q 015867          346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL  389 (399)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell  389 (399)
                                  .......+++..++..||.-+|.+||+++++-
T Consensus       187 ------------~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~  218 (484)
T KOG1023|consen  187 ------------ELLNELPPELLLLVARCWEEIPEKRPSIEQIR  218 (484)
T ss_pred             ------------hhhhhcchHHHHHHHHhcccChhhCccHHHHH
Confidence                        00012334678999999999999999998763

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.69  E-value=1.9e-16  Score=136.87  Aligned_cols=134  Identities=25%  Similarity=0.243  Sum_probs=91.0

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecchhhh---HH----------------------HHHHHHHHHHhhhcCCC
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR---DA----------------------AMIEIDVLQHLAKNDKG  125 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~---~~----------------------~~~e~~~l~~l~~~~~~  125 (399)
                      .+.||+|+||+||+|.+. +++.||||+++......   ..                      ...|.+.+..+....  
T Consensus         2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~--   78 (187)
T cd05119           2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAG--   78 (187)
T ss_pred             CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcC--
Confidence            467999999999999876 78899999986532111   11                      123445555554311  


Q ss_pred             CCcceeeeceeeccCCeEEEEEccC-CCCHH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEE
Q 015867          126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILL  202 (399)
Q Consensus       126 ~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~-~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll  202 (399)
                        ..+...+..    ...++||||+ ++++. ..+....   .. ..+..++.+++.++.++|. .||+|+||||+||++
T Consensus        79 --~~~~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~---~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili  148 (187)
T cd05119          79 --VPVPKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR---LL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILV  148 (187)
T ss_pred             --CCCCceEec----CCCEEEEEEeCCCCccChhhhhhh---hc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEE
Confidence              123333322    2458999999 53321 1121111   11 5678899999999999999 999999999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCccc
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                      +                         ++.++|+|||.+..
T Consensus       149 ~-------------------------~~~~~liDfg~a~~  163 (187)
T cd05119         149 D-------------------------DGKVYIIDVPQAVE  163 (187)
T ss_pred             E-------------------------CCcEEEEECccccc
Confidence            3                         56699999998854

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.69  E-value=1.2e-17  Score=167.95  Aligned_cols=278  Identities=22%  Similarity=0.318  Sum_probs=200.1

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCC----CCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK----GGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~----~~~~~iv~~~~~~~~~  140 (399)
                      .+.+.+.+.+-+|+++.++.+.-..+|..+++|+......-....      .+.+.....    ..+|.++...-.+...
T Consensus       803 ~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~------~~s~r~~s~~~i~p~~P~v~~~~~s~~~r  876 (1205)
T KOG0606|consen  803 PDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTND------YESIRSKSNILITPRSPAVVRSFPSFPCR  876 (1205)
T ss_pred             CccceecccccCCCCcccccCCccccccccchhhhccchhhcccc------ccccCCccCccccCCCCceecccCCCCCC
Confidence            456888889999999999999888888778888765432211110      111111111    2335555555445567


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC-CC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS-SS  218 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~-~~  218 (399)
                      ...+|||+|+ +++|...++..+  ..+...++.+...+..++++||+..++|+|++|.|+|...+++.+++++... ..
T Consensus       877 sP~~L~~~~~~~~~~~Skl~~~~--~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v  954 (1205)
T KOG0606|consen  877 SPLPLVGHYLNGGDLPSKLHNSG--CLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV  954 (1205)
T ss_pred             CCcchhhHHhccCCchhhhhcCC--CcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCcccccccc
Confidence            8899999999 889999998877  5777888889999999999999999999999999999999999999887522 11


Q ss_pred             CCCCcccCCCCCc---eEEeecCCcccCC-------CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          219 GEMPFRCLPKSSA---IKLIDFGSTAFDN-------QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       219 ~~~~~~~~~~~~~---~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                      +..... .+..+.   ...-+++.+...+       .......||+.|.+||.+.+...+..+|+|++|+++++.++|.+
T Consensus       955 g~~~p~-~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~p 1033 (1205)
T KOG0606|consen  955 GLIPPT-TDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIP 1033 (1205)
T ss_pred             ccccCc-CCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCC
Confidence            211111 011111   1111222221111       11234579999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||.......+...|...                        ...||.+.                       ...+.+++
T Consensus      1034 p~na~tpq~~f~ni~~~------------------------~~~~p~g~-----------------------~~~s~~aq 1066 (1205)
T KOG0606|consen 1034 PFNAETPQQIFENILNR------------------------DIPWPEGP-----------------------EEGSYEAQ 1066 (1205)
T ss_pred             CCCCcchhhhhhccccC------------------------CCCCCCCc-----------------------cccChhhh
Confidence            99987776655444332                        34576654                       34567789


Q ss_pred             HHHHHccccCCCCCCCHH---HHhCCccccCCC
Q 015867          369 DLLHGLLRYDPSERLTAR---QALNHPFFRNLN  398 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~---ell~hp~f~~~~  398 (399)
                      +++..+|..+|.+|.++.   ++-.||||+.++
T Consensus      1067 ~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~ 1099 (1205)
T KOG0606|consen 1067 DLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVD 1099 (1205)
T ss_pred             hhhhhhhccCchhccCcccccccccCCccCCCC
Confidence            999999999999999987   999999999864

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.66  E-value=2.4e-15  Score=134.71  Aligned_cols=134  Identities=21%  Similarity=0.224  Sum_probs=96.1

Q ss_pred             eeec-cccceEEEEEEEccCCeEEEEEEEecch--------------hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           72 SKMG-EGTFGRVLECWDRQTQERVAIKVVRSIR--------------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        72 ~~lG-~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      ..|| .||.|+||.+...  +..++||.+....              ........|++++..+.+..    ..++..+++
T Consensus        37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~g----i~vP~pl~~  110 (239)
T PRK01723         37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAG----LPVPRPIAA  110 (239)
T ss_pred             ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCC----CCCceeEee
Confidence            4577 7888888888653  6679999884310              12245677999999997632    123444444


Q ss_pred             ecc-CC---eEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccC
Q 015867          137 FDY-RN---HICIVFEKL-G-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       137 ~~~-~~---~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~  210 (399)
                      ... ..   ..++|||++ | .+|.+++...   .++..    .+.||+.+|.+||+.||+|+||||.|||++       
T Consensus       111 ~~~~~~~~~~~~lV~e~l~G~~~L~~~l~~~---~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~-------  176 (239)
T PRK01723        111 RVVRHGLFYRADILIERIEGARDLVALLQEA---PLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLD-------  176 (239)
T ss_pred             eeeecCcceeeeEEEEecCCCCCHHHHHhcC---CCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEc-------
Confidence            322 22   235999999 5 5899888653   35554    367899999999999999999999999994       


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCccc
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                                       .++.++|+|||.+..
T Consensus       177 -----------------~~~~v~LIDfg~~~~  191 (239)
T PRK01723        177 -----------------PDGKFWLIDFDRGEL  191 (239)
T ss_pred             -----------------CCCCEEEEECCCccc
Confidence                             345799999998754

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.65  E-value=1.5e-16  Score=152.66  Aligned_cols=254  Identities=22%  Similarity=0.298  Sum_probs=186.8

Q ss_pred             cCCCEEEEeeecc--ccceEEEEEEE--ccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           64 LTPRYKILSKMGE--GTFGRVLECWD--RQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        64 ~~~~y~~~~~lG~--G~~g~V~~~~~--~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      +...+.+.+.+|.  |.+|.||.+..  ..++..+|+|.-+...   .....-.+|+     ..+.+...|+++++.+..
T Consensus       112 ~~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~-----~s~~~i~~~~~~v~~~~~  186 (524)
T KOG0601|consen  112 FDQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREF-----LSHHKIDSHENPVRDSPA  186 (524)
T ss_pred             hhhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchh-----hcccccCccccccccCcc
Confidence            3456889999999  99999999988  8889999999743211   1112222232     334455578899998899


Q ss_pred             eccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH----HHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE----SVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       137 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~----~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      ++..+..++-.|+|+.+|.++..... ..++...++.++.+...    ||.++|+.+++|-|+||+||++..+       
T Consensus       187 ~e~~~~lfiqtE~~~~sl~~~~~~~~-~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~-------  258 (524)
T KOG0601|consen  187 WEGSGILFIQTELCGESLQSYCHTPC-NFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSD-------  258 (524)
T ss_pred             cccCCcceeeeccccchhHHhhhccc-ccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccc-------
Confidence            99999999999999999988876543 24889999999999999    9999999999999999999998442       


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC--------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH--------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  284 (399)
                                      ...++++|||+........        ....|...|++||...+ -++...|++++|.++.+..
T Consensus       259 ----------------~~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~-l~~~~~di~sl~ev~l~~~  321 (524)
T KOG0601|consen  259 ----------------WTSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNG-LATFASDIFSLGEVILEAI  321 (524)
T ss_pred             ----------------cceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhcc-ccchHhhhcchhhhhHhhH
Confidence                            1668888888765433221        11257788999999766 5789999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       285 ~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                      ++..+...... ....++....  .|.                                              ++-...+
T Consensus       322 l~~~~~~~g~~-~~W~~~r~~~--ip~----------------------------------------------e~~~~~s  352 (524)
T KOG0601|consen  322 LGSHLPSVGKN-SSWSQLRQGY--IPL----------------------------------------------EFCEGGS  352 (524)
T ss_pred             hhcccccCCCC-CCcccccccc--Cch----------------------------------------------hhhcCcc
Confidence            98766643311 0000000000  111                                              1112334


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      .++...+..|++.+|..|++++.+++|++.+.
T Consensus       353 ~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  353 SSLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence            55666999999999999999999999999864

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=99.64  E-value=1.9e-15  Score=125.40  Aligned_cols=133  Identities=23%  Similarity=0.301  Sum_probs=106.7

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      +++.||.|.++.||++....  ..+++|....... ...+..|..+++.+.+.    ..++++++.++...+..+++|||
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~-~~~~~~e~~~~~~l~~~----~~~~p~~~~~~~~~~~~~~v~e~   74 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD--EDYVLKINPSREK-GADREREVAILQLLARK----GLPVPKVLASGESDGWSYLLMEW   74 (155)
T ss_pred             cceecccccccceEEEEecC--CeEEEEecCCCCc-hhHHHHHHHHHHHHHHc----CCCCCeEEEEcCCCCccEEEEEe
Confidence            45789999999999998643  6799999865433 45678899999999874    24677777877777899999999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL---RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      + |..+..+         +......++.+++.+|..||..   +++|+|++|+||+++                      
T Consensus        75 ~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~----------------------  123 (155)
T cd05120          75 IEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD----------------------  123 (155)
T ss_pred             cCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE----------------------
Confidence            9 6655533         4455667899999999999985   699999999999994                      


Q ss_pred             CCCCCceEEeecCCccc
Q 015867          226 LPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~  242 (399)
                        ..+.++++|||.+..
T Consensus       124 --~~~~~~l~Df~~~~~  138 (155)
T cd05120         124 --DGKILGIIDWEYAGY  138 (155)
T ss_pred             --CCcEEEEEecccccC
Confidence              356799999998753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=99.52  E-value=1.9e-14  Score=141.55  Aligned_cols=150  Identities=19%  Similarity=0.270  Sum_probs=94.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-----------------------------------hhHH--
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-----------------------------------YRDA--  108 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----------------------------------~~~~--  108 (399)
                      ..|.. +.||+|++|+||+|+...+|+.||||+.++...                                   ....  
T Consensus       120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~  198 (537)
T PRK04750        120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH  198 (537)
T ss_pred             HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence            45776 789999999999999888899999999964310                                   1111  


Q ss_pred             ----HHHHHHHHHHhhhcCCCCCcceeeeceeec-cCCeEEEEEccC-CCCHHHHH--HhcCC--CCCCHHHHHHHHHHH
Q 015867          109 ----AMIEIDVLQHLAKNDKGGSSHCVQIRNWFD-YRNHICIVFEKL-GPSLFDFL--KRNKY--CPFPVDLVREFGRQL  178 (399)
Q Consensus       109 ----~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~-~~~~~~lv~e~~-~~~L~~~l--~~~~~--~~~~~~~~~~i~~qi  178 (399)
                          +..|...+.++..+-  .+...+.+-..+. .....+|||||+ |+.+.++.  ...+.  ..+....+..++.|+
T Consensus       199 ~ElD~~~Ea~N~~~~~~~f--~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi  276 (537)
T PRK04750        199 DELDLMREAANASQLRRNF--EDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV  276 (537)
T ss_pred             HhhCHHHHHHHHHHHHHHc--cCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence                222333333333221  1122233323222 245678999999 88998753  33221  013334444555555


Q ss_pred             HHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC
Q 015867          179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ  245 (399)
Q Consensus       179 ~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~  245 (399)
                      +       ..|++|+|+||.||+++.++                    ...+.++++|||++...+.
T Consensus       277 f-------~~GffHaDpHPGNIlv~~~g--------------------~~~~~i~llDFGivg~l~~  316 (537)
T PRK04750        277 F-------RDGFFHADMHPGNIFVSYDP--------------------PENPRYIALDFGIVGSLNK  316 (537)
T ss_pred             H-------hCCeeeCCCChHHeEEecCC--------------------CCCCeEEEEecceEEECCH
Confidence            4       59999999999999996543                    2345899999998765443

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=99.49  E-value=3.2e-13  Score=131.32  Aligned_cols=142  Identities=19%  Similarity=0.221  Sum_probs=92.9

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchhhh-----------------------------------------HHHH
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-----------------------------------------DAAM  110 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-----------------------------------------~~~~  110 (399)
                      +.||+|++|.||+|+. .+|+.||||+.+......                                         -.+.
T Consensus       123 ~plasaSigQVh~A~l-~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~  201 (437)
T TIGR01982       123 KPLAAASIAQVHRARL-VDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR  201 (437)
T ss_pred             cceeeeehhheEEEEe-cCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence            5799999999999986 478999999986421000                                         0123


Q ss_pred             HHHHHHHHhhhcCCCCCcceeeeceee-ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHH-HHHHHHH
Q 015867          111 IEIDVLQHLAKNDKGGSSHCVQIRNWF-DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE-SVAYMHD  187 (399)
Q Consensus       111 ~e~~~l~~l~~~~~~~~~~iv~~~~~~-~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~-~L~~lH~  187 (399)
                      .|.+.+..+...-. +++++ .+...+ ......+|||||+ |++|.++...... ..+   ...++.+++. .+..+|.
T Consensus       202 ~Ea~n~~~~~~~~~-~~~~v-~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~-~~~---~~~ia~~~~~~~l~ql~~  275 (437)
T TIGR01982       202 REAANASELGENFK-NDPGV-YVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEA-GLD---RKALAENLARSFLNQVLR  275 (437)
T ss_pred             HHHHHHHHHHHhcC-CCCCE-EeCCEehhhcCCceEEEEeECCcccccHHHHHhc-CCC---HHHHHHHHHHHHHHHHHh
Confidence            34444444443211 22222 222222 2245579999999 8899887654221 122   2345555555 4678999


Q ss_pred             CCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCC
Q 015867          188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN  244 (399)
Q Consensus       188 ~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~  244 (399)
                      .|++|+|+||.||++.                        .++.++++|||++...+
T Consensus       276 ~g~~H~D~hPgNilv~------------------------~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       276 DGFFHADLHPGNIFVL------------------------KDGKIIALDFGIVGRLS  308 (437)
T ss_pred             CCceeCCCCcccEEEC------------------------CCCcEEEEeCCCeeECC
Confidence            9999999999999993                        45679999999876544

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=99.47  E-value=6.4e-13  Score=114.03  Aligned_cols=136  Identities=19%  Similarity=0.229  Sum_probs=96.5

Q ss_pred             EeeeccccceEEEEEEEcc------CCeEEEEEEEecch-----------------------hhhHHHH----HHHHHHH
Q 015867           71 LSKMGEGTFGRVLECWDRQ------TQERVAIKVVRSIR-----------------------KYRDAAM----IEIDVLQ  117 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~------~~~~vaiK~~~~~~-----------------------~~~~~~~----~e~~~l~  117 (399)
                      ...||.|--+.||.|....      .+..+|||+.+...                       .......    .|.+.|+
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3579999999999997543      35789999985210                       1112222    6888888


Q ss_pred             HhhhcCCCCCcceeeeceeeccCCeEEEEEccCCCC-HH-HHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HHCCccccC
Q 015867          118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-LF-DFLKRNKYCPFPVDLVREFGRQLLESVAYM-HDLRLIHTD  194 (399)
Q Consensus       118 ~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~-L~-~~l~~~~~~~~~~~~~~~i~~qi~~~L~~l-H~~givH~D  194 (399)
                      .+....    -+++..+.+    ...+|||||++++ +. ..++..   .++...+..+..+++.+|..| |..||||+|
T Consensus        82 rl~~~G----v~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~---~~~~~~~~~i~~~i~~~l~~l~H~~glVHGD  150 (197)
T cd05146          82 RMQKAG----IPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA---KLNDEEMKNAYYQVLSMMKQLYKECNLVHAD  150 (197)
T ss_pred             HHHHcC----CCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc---ccCHHHHHHHHHHHHHHHHHHHHhCCeecCC
Confidence            887643    244555543    5678999999543 32 122221   355666778899999999998 899999999


Q ss_pred             CCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCccc
Q 015867          195 LKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       195 ikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                      |++.|||+.                         ++.++|+|||.+..
T Consensus       151 Ls~~NIL~~-------------------------~~~v~iIDF~qav~  173 (197)
T cd05146         151 LSEYNMLWH-------------------------DGKVWFIDVSQSVE  173 (197)
T ss_pred             CCHHHEEEE-------------------------CCcEEEEECCCcee
Confidence            999999983                         35699999997653

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05151 ChoK Choline Kinase (ChoK)

Probab=99.44  E-value=8.1e-13  Score=112.21  Aligned_cols=127  Identities=17%  Similarity=0.158  Sum_probs=92.7

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL  150 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  150 (399)
                      ++.|+.|.++.||++...  ++.|++|+.............|..+++.+....     .+++++.+..  ...++||||+
T Consensus         3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~-----~~P~~~~~~~--~~~~lv~e~i   73 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTELLINRENEAENSKLAAEAG-----IGPKLYYFDP--ETGVLITEFI   73 (170)
T ss_pred             eeecCCcccCceEEEEEC--CeEEEEEeCCCCcccccCHHHHHHHHHHHHHhC-----CCCceEEEeC--CCCeEEEEec
Confidence            467899999999998753  778999997654322344677899999887532     2344444433  3457999999


Q ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCc-----cccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          151 -GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL-----IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       151 -~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~gi-----vH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                       |.++.+.    .   .   ....++.+++.+|..||+.++     +|+|++|.||+++                     
T Consensus        74 ~G~~l~~~----~---~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~---------------------  122 (170)
T cd05151          74 EGSELLTE----D---F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD---------------------  122 (170)
T ss_pred             CCCccccc----c---c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE---------------------
Confidence             7666542    0   1   123467899999999999985     9999999999994                     


Q ss_pred             cCCCCCceEEeecCCcc
Q 015867          225 CLPKSSAIKLIDFGSTA  241 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~  241 (399)
                          ++.++++|||.+.
T Consensus       123 ----~~~~~liDf~~a~  135 (170)
T cd05151         123 ----DGRLWLIDWEYAG  135 (170)
T ss_pred             ----CCeEEEEeccccc
Confidence                3458999999864

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.40  E-value=1.3e-13  Score=122.82  Aligned_cols=194  Identities=21%  Similarity=0.297  Sum_probs=135.1

Q ss_pred             CcceeeeceeeccC-----CeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCC
Q 015867          127 SSHCVQIRNWFDYR-----NHICIVFEKL-GPSLFDFLKRNKY--CPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLK  196 (399)
Q Consensus       127 ~~~iv~~~~~~~~~-----~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dik  196 (399)
                      |.|+++++.++.+.     ....++.||+ .|+|.++|++.+.  ..+.....++|+.||+.||.|||+..  |+|+++.
T Consensus       126 HsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlT  205 (458)
T KOG1266|consen  126 HSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLT  205 (458)
T ss_pred             HHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcc
Confidence            46899999888764     3578999999 9999999986442  35777888999999999999999985  9999999


Q ss_pred             CCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCccc-------CCCCCcccccCCCccchhhhhCCCCCC
Q 015867          197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-------DNQNHSSIVSTRHYRAPEVILGLGWSY  269 (399)
Q Consensus       197 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~-------~~~~~~~~~gt~~y~aPE~~~~~~~~~  269 (399)
                      .+-|++..+|.+|                        +.--.....       .....+...|-++|.|||.=.....+.
T Consensus       206 c~tifiq~ngLIk------------------------ig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~  261 (458)
T KOG1266|consen  206 CDTIFIQHNGLIK------------------------IGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTG  261 (458)
T ss_pred             hhheeecCCceEE------------------------ecccCccccchhhhhhhHhhhhccccCCccccCCcCccccccc
Confidence            9999996555433                        321111100       011122335678899999766667788


Q ss_pred             cchhHHHHHHHHHHHhCCCC-CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHh
Q 015867          270 PCDMWSVGCILVELCTGEAL-FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK  348 (399)
Q Consensus       270 ~~DiwslG~il~ell~g~~P-f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  348 (399)
                      ++|||++|....+|..+..- -.+....+.-..|....            .+..                          
T Consensus       262 a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i------------~~le--------------------------  303 (458)
T KOG1266|consen  262 ASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVI------------IGLE--------------------------  303 (458)
T ss_pred             chhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhhe------------eecc--------------------------
Confidence            99999999999999887643 22222211111111110            0000                          


Q ss_pred             hhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                                     ..--+++|.+||+-.|..||++.+++-||-+-++
T Consensus       304 ---------------n~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeV  337 (458)
T KOG1266|consen  304 ---------------NGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEV  337 (458)
T ss_pred             ---------------CccccCcCcccccCCCCCCcchhhhhcCceeeec
Confidence                           0011579999999999999999999999986553

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.37  E-value=6.7e-13  Score=127.74  Aligned_cols=250  Identities=19%  Similarity=0.135  Sum_probs=172.9

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEc-cCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ...+|..+..||.|.|+.|+.+..+ .++-.|++|-+....   ..+.....|+.+...+.     -|.+++..+..|..
T Consensus       263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~-----~~~~~~g~~~~W~~  337 (524)
T KOG0601|consen  263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILG-----SHLPSVGKNSSWSQ  337 (524)
T ss_pred             ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhh-----cccccCCCCCCccc
Confidence            3567999999999999999987654 677889998764321   12222333554544444     35677777777776


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ....|+=.||| ++++...+...  ..+.+...+.+..|++.++.++|++.++|.|+||+||++..+             
T Consensus       338 ~r~~~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~-------------  402 (524)
T KOG0601|consen  338 LRQGYIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND-------------  402 (524)
T ss_pred             cccccCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc-------------
Confidence            67777999999 87766555322  257888899999999999999999999999999999999542             


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCcc--chhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~--aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                                ....++.|||......-......+...+.  +++......+..+.|++|||..+.+.++|..--..... 
T Consensus       403 ----------~~~~~~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~~-  471 (524)
T KOG0601|consen  403 ----------GFFSKLGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGVQ-  471 (524)
T ss_pred             ----------hhhhhccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCccccc-
Confidence                      25678888887653222222233333444  55556667899999999999999999998643221111 


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                        ...|..                                                  ......+....++..+...++.
T Consensus       472 --~~~i~~--------------------------------------------------~~~p~~~~~~~~~q~~~kv~~~  499 (524)
T KOG0601|consen  472 --SLTIRS--------------------------------------------------GDTPNLPGLKLQLQVLLKVMIN  499 (524)
T ss_pred             --ceeeec--------------------------------------------------ccccCCCchHHhhhhhhhhhcC
Confidence              000100                                                  0011223334667889999999


Q ss_pred             cCCCCCCCHHHHhCCccccC
Q 015867          377 YDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~  396 (399)
                      .++..|+.+.++..|+=|..
T Consensus       500 ~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  500 PDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             Cccccchhhhhhcccchhhh
Confidence            99999999999988876643

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=99.33  E-value=3.7e-11  Score=99.37  Aligned_cols=144  Identities=24%  Similarity=0.201  Sum_probs=106.1

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEec---------chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---------IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .+..|-+|+-+.|+++..  .|+.+.||.=..         ....+.....|.+++..+.....    .++.+  +|.+.
T Consensus        11 ~l~likQGAEArv~~~~~--~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI----~~P~l--~~~D~   82 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSF--SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGI----PAPRL--IFIDT   82 (229)
T ss_pred             cceeeeccceeeEeeecc--CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC----CCceE--EEEec
Confidence            567889999999998864  577788875311         12234556678888888876421    23333  34556


Q ss_pred             CeEEEEEccCCC--CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          141 NHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       141 ~~~~lv~e~~~~--~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ..-.|+|||+.|  ++.+++...-...........++.+|-..+.-||..+|+|+||..+||++.+++            
T Consensus        83 ~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~------------  150 (229)
T KOG3087|consen   83 YGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDG------------  150 (229)
T ss_pred             CCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCC------------
Confidence            667899999955  899988776544444444578999999999999999999999999999997654            


Q ss_pred             CCCCcccCCCCCceEEeecCCccc
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                               ....+.++|||++..
T Consensus       151 ---------~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  151 ---------NQITPILIDFGLSSV  165 (229)
T ss_pred             ---------CcCceEEEeecchhc
Confidence                     344569999998753

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=99.31  E-value=2.7e-11  Score=118.05  Aligned_cols=181  Identities=15%  Similarity=0.204  Sum_probs=120.5

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      |.+ ...+-++.+..-.|..+.++.+|.|.+.+....     .....+.+.+.+.+...||+|+++++.++.++..|||.
T Consensus        15 Y~l-e~~~~~~~a~~~~~t~k~~~~~vsVF~~~~~~~-----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvT   88 (690)
T KOG1243|consen   15 YDL-EETAFSSEALWPDGTRKADGGPVSVFVYKRSNG-----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVT   88 (690)
T ss_pred             ccc-ccccCCCcccccccceeccCCceEEEEEeCCCc-----hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEe
Confidence            444 333333333222455667788888888865433     11223444455555567799999999999999999999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          148 EKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH-DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       148 e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH-~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      |.+. .|..+++.     +....+...+.||+.||.||| +.+++|++|.-+.|+|+.                      
T Consensus        89 ErV~-Pl~~~lk~-----l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~----------------------  140 (690)
T KOG1243|consen   89 ERVR-PLETVLKE-----LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNE----------------------  140 (690)
T ss_pred             eccc-cHHHHHHH-----hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcC----------------------
Confidence            9983 34455554     346667788999999999998 567999999999999965                      


Q ss_pred             CCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhC
Q 015867          227 PKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG  286 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  286 (399)
                        .+..||++|..+.......   ....---.|..|+.+....  -..|.|.|||++++++.|
T Consensus       141 --~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s~--~s~D~~~Lg~li~el~ng  199 (690)
T KOG1243|consen  141 --SGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPSE--WSIDSWGLGCLIEELFNG  199 (690)
T ss_pred             --CCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCccc--cchhhhhHHHHHHHHhCc
Confidence              4556666666543322111   1111122355666544333  357999999999999999

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.27  E-value=7e-11  Score=98.18  Aligned_cols=131  Identities=21%  Similarity=0.226  Sum_probs=93.6

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEec---------chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRS---------IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---------~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ..+++|+-+.+|.+...  |..+++|.=.+         ..........|..++..+.....    +++.+++  .+.+.
T Consensus         2 ~~i~~GAEa~i~~~~~~--g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV----~~P~v~d--vD~~~   73 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL--GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGV----PVPIVYD--VDPDN   73 (204)
T ss_pred             chhhCCcceeEEeeecc--CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCC----CCCeEEE--EcCCC
Confidence            35789999999988542  33466664211         11123456678999988876431    3444443  45667


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      ..|+|||+ |..|.+.+....         ..++..+-.-+.-||..||||+||.++||++.                  
T Consensus        74 ~~I~me~I~G~~lkd~l~~~~---------~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~------------------  126 (204)
T COG3642          74 GLIVMEYIEGELLKDALEEAR---------PDLLREVGRLVGKLHKAGIVHGDLTTSNIILS------------------  126 (204)
T ss_pred             CEEEEEEeCChhHHHHHHhcc---------hHHHHHHHHHHHHHHhcCeecCCCccceEEEe------------------
Confidence            78999999 777787887641         35778888889999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCC
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDN  244 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~  244 (399)
                             ++.+.++|||++.+..
T Consensus       127 -------~~~i~~IDfGLg~~s~  142 (204)
T COG3642         127 -------GGRIYFIDFGLGEFSD  142 (204)
T ss_pred             -------CCcEEEEECCcccccc
Confidence                   3349999999986443

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=99.16  E-value=1.9e-10  Score=101.94  Aligned_cols=107  Identities=18%  Similarity=0.156  Sum_probs=73.9

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC---CeEEEE
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR---NHICIV  146 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~---~~~~lv  146 (399)
                      +.|+.|..+.||++... +|+.+++|+......  .......|.++++.+....    ..+++++.+....   +..++|
T Consensus         4 ~~l~~G~~n~~~~v~~~-~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~----~~vp~~~~~~~~~~~~~~~~~v   78 (223)
T cd05154           4 RQLSGGQSNLTYLLTAG-GGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTG----VPVPKVLALCEDPSVLGTPFYV   78 (223)
T ss_pred             eecCCCccceEEEEEec-CCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCC----CCCCCEEEECCCCCccCCceEE
Confidence            67899999999999764 357899999765432  3456788999999987631    2345555555443   367899


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH  186 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH  186 (399)
                      |||+ |.++.+.+..   ..++......++.+++.+|..||
T Consensus        79 ~e~i~G~~l~~~~~~---~~~~~~~~~~i~~~i~~~l~~lH  116 (223)
T cd05154          79 MERVDGRVLRDRLLR---PELSPEERRALARALADTLAALH  116 (223)
T ss_pred             EEEeCCEecCCCCCC---CCCCHHHHHHHHHHHHHHHHHHh
Confidence            9999 7777654421   13566666667777777777776

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=99.13  E-value=1.3e-09  Score=98.77  Aligned_cols=131  Identities=18%  Similarity=0.085  Sum_probs=89.9

Q ss_pred             CCeEEEEEEEecch------------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-----CCeEEEEEccCCC
Q 015867           90 TQERVAIKVVRSIR------------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-----RNHICIVFEKLGP  152 (399)
Q Consensus        90 ~~~~vaiK~~~~~~------------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-----~~~~~lv~e~~~~  152 (399)
                      .|+.|.||......            ........|...+..+..... ..|   ..+.+++.     ....+||||++++
T Consensus        44 ~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GI-ptP---~pVa~~e~~~~~~~~~s~LVte~l~~  119 (268)
T PRK15123         44 AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGV-DTM---TGVAFGERGSNPATRTSFIITEDLAP  119 (268)
T ss_pred             CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCC-CCC---CeeEEEEecCCCccceeEEEEeeCCC
Confidence            46678888663221            011136788999888876432 223   33333332     2357899999943


Q ss_pred             --CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCC
Q 015867          153 --SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS  230 (399)
Q Consensus       153 --~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (399)
                        +|.+++........+......++.+++..+..||..||+|+|+++.|||+..+..                 ......
T Consensus       120 ~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~-----------------~~~~~~  182 (268)
T PRK15123        120 TISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFP-----------------GREEDL  182 (268)
T ss_pred             CccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEecccc-----------------CCCCCc
Confidence              7999986432234667778899999999999999999999999999999963100                 002356


Q ss_pred             ceEEeecCCcc
Q 015867          231 AIKLIDFGSTA  241 (399)
Q Consensus       231 ~~kl~Dfg~a~  241 (399)
                      .+.|+||+.+.
T Consensus       183 ~~~LIDl~r~~  193 (268)
T PRK15123        183 KLSVIDLHRAQ  193 (268)
T ss_pred             eEEEEECCccc
Confidence            79999999764

>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]

Probab=99.09  E-value=5.4e-09  Score=99.29  Aligned_cols=166  Identities=17%  Similarity=0.250  Sum_probs=118.8

Q ss_pred             ceEEEEEEEccCCeEEEEEEEecchhhh-HHHHHHHHHHHHhhhcCCCCCcceeeeceeecc----CCeEEEEEccC--C
Q 015867           79 FGRVLECWDRQTQERVAIKVVRSIRKYR-DAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY----RNHICIVFEKL--G  151 (399)
Q Consensus        79 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~----~~~~~lv~e~~--~  151 (399)
                      -.+.|+|+...+|..|++|.+....... .....-++.++++.      |.|+|.+.+.|..    +..+++|++|+  .
T Consensus       289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~------h~NvV~frevf~t~tF~D~SlvlvYDYyP~s  362 (655)
T KOG3741|consen  289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLC------HTNVVPFREVFLTYTFGDLSLVLVYDYYPSS  362 (655)
T ss_pred             cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhc------cCceeehhhhhhhhccCcceEEEEEecCCCC
Confidence            3578999999999999999984322111 12223456666665      4899999998873    45789999999  5


Q ss_pred             CCHHHHHHhcC-------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          152 PSLFDFLKRNK-------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       152 ~~L~~~l~~~~-------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ++|.++--...             ....++..++.|+.|+..||.++|+.|+.-+-|.|.+||+.               
T Consensus       363 ~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~---------------  427 (655)
T KOG3741|consen  363 PTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVT---------------  427 (655)
T ss_pred             chHHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEee---------------
Confidence            68888663211             12478899999999999999999999999999999999994               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                               ....++|...|.........    +       |.+.+   -.+-|.=.||.+++.|.||..
T Consensus       428 ---------G~~RIriS~C~i~Dvl~~d~----~-------~~le~---~Qq~D~~~lG~ll~aLAt~~~  474 (655)
T KOG3741|consen  428 ---------GKMRIRISGCGIMDVLQEDP----T-------EPLES---QQQNDLRDLGLLLLALATGTE  474 (655)
T ss_pred             ---------CcceEEEecccceeeecCCC----C-------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence                     33456666666543222221    0       11111   235699999999999999953

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=99.01  E-value=8.9e-10  Score=94.31  Aligned_cols=126  Identities=26%  Similarity=0.337  Sum_probs=76.8

Q ss_pred             EEEEEEEccCCeEEEEEEEecch---------------------------hhhHHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           81 RVLECWDRQTQERVAIKVVRSIR---------------------------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        81 ~V~~~~~~~~~~~vaiK~~~~~~---------------------------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      .||.|.. .+|..+|||+.+...                           ........|.+.|..+....    -+++..
T Consensus         1 ~Vy~~~~-~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~G----v~vP~p   75 (188)
T PF01163_consen    1 DVYHAID-PDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAG----VPVPKP   75 (188)
T ss_dssp             EEEEEEE-CTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-----SS--E
T ss_pred             CEEEEEC-CCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCC----ccCCcE
Confidence            3888865 567789999984210                           01223455888888876532    245555


Q ss_pred             ceeeccCCeEEEEEccCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHH-HHHCCccccCCCCCcEEEeecccccC
Q 015867          134 RNWFDYRNHICIVFEKLG--PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY-MHDLRLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~-lH~~givH~Dikp~NIll~~~~~~~~  210 (399)
                      +.+.    ..+|||||++  |.....+....   ++......++.+++..+.. +|..||||+|+.+.|||+..      
T Consensus        76 ~~~~----~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~------  142 (188)
T PF01163_consen   76 YDYN----RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDD------  142 (188)
T ss_dssp             EEEE----TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEET------
T ss_pred             EEEe----CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeec------
Confidence            5432    3579999996  64333333322   2234456788888886555 57999999999999999942      


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccC
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD  243 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~  243 (399)
                                         +.+.++|||.+...
T Consensus       143 -------------------~~~~iIDf~qav~~  156 (188)
T PF01163_consen  143 -------------------GKVYIIDFGQAVDS  156 (188)
T ss_dssp             -------------------TCEEE--GTTEEET
T ss_pred             -------------------ceEEEEecCcceec
Confidence                               37999999987543

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=98.99  E-value=1.7e-10  Score=113.01  Aligned_cols=163  Identities=21%  Similarity=0.360  Sum_probs=107.6

Q ss_pred             HHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCC
Q 015867          176 RQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR  254 (399)
Q Consensus       176 ~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~  254 (399)
                      .++..||.|+|.. ++||+.|.|++|.++..+.+|+++|..+-....+     .+       |-+..+.........-..
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~-----~~-------~p~~~yd~~lp~~~~~~~  173 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGP-----TE-------YPFSEYDPPLPLLLQPHL  173 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCC-----Cc-------cccccCCCCCChhhccCc
Confidence            3444999999964 8999999999999976666555554322211100     00       111111222222334567


Q ss_pred             CccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCC
Q 015867          255 HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW  333 (399)
Q Consensus       255 ~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  333 (399)
                      .|.|||++.+...++++|+||||+++|.+.. |+.-+...+.......- ......+.                      
T Consensus       174 ~f~apE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~~~-~~~~~~~~----------------------  230 (700)
T KOG2137|consen  174 NFLAPEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYSFS-RNLLNAGA----------------------  230 (700)
T ss_pred             ccccchhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhhhh-hccccccc----------------------
Confidence            8999999999889999999999999999984 55555544332222111 11000000                      


Q ss_pred             CCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          334 PEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       334 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                                             .-...+++.++++=|.++|..|+..||++.+++..|||.+
T Consensus       231 -----------------------~~~s~~~p~el~~~l~k~l~~~~~~rp~~~~l~~~~ff~D  270 (700)
T KOG2137|consen  231 -----------------------FGYSNNLPSELRESLKKLLNGDSAVRPTLDLLLSIPFFSD  270 (700)
T ss_pred             -----------------------ccccccCcHHHHHHHHHHhcCCcccCcchhhhhcccccCC
Confidence                                   0111467889999999999999999999999999999987

>PRK09902 hypothetical protein; Provisional

Probab=98.84  E-value=1.8e-07  Score=80.65  Aligned_cols=139  Identities=12%  Similarity=0.157  Sum_probs=101.5

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEec-------chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec---c--CC
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRS-------IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD---Y--RN  141 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~---~--~~  141 (399)
                      -|.||.+.|+....  .|+.|-+|....       .......+..|...++.+.....   | ++... ++.   .  .-
T Consensus        26 ~~rgG~SgV~r~~~--~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~Gv---P-VP~pv-f~~~~k~~~~~   98 (216)
T PRK09902         26 YRRNGMSGVQCVER--NGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGV---I-VPKIV-FGEAVKIEGEW   98 (216)
T ss_pred             cCCCCcceEEEEEe--CCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCC---C-CCccc-eeeeeccCCce
Confidence            35688888887643  344688887641       12356778899999999987553   2 33433 222   1  22


Q ss_pred             eEEEEEccCC--CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          142 HICIVFEKLG--PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       142 ~~~lv~e~~~--~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      ..+||+|-++  .+|.+++........+......++.+++..|.-||+.|+.|+|+.+.|||+..++             
T Consensus        99 rA~LVTe~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g-------------  165 (216)
T PRK09902         99 RALLVTEDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEG-------------  165 (216)
T ss_pred             EEEEEEEeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCC-------------
Confidence            5789999885  6899998775544567777889999999999999999999999999999995321             


Q ss_pred             CCCcccCCCCCceEEeecCCcc
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTA  241 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~  241 (399)
                               ...+.++||.-+.
T Consensus       166 ---------~~~v~lIDlEk~r  178 (216)
T PRK09902        166 ---------KAEAGFLDLEKSR  178 (216)
T ss_pred             ---------CeeEEEEEhhccc
Confidence                     2359999997553

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.80  E-value=9.3e-08  Score=88.95  Aligned_cols=189  Identities=16%  Similarity=0.238  Sum_probs=119.5

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeecee------eccC-Ce
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW------FDYR-NH  142 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~------~~~~-~~  142 (399)
                      ..+.||+|+-+.+|-.-.  -+. .+-|++.........     +....|..  ...||-+..-+.|      ..++ ..
T Consensus        15 ~gr~LgqGgea~ly~l~e--~~d-~VAKIYh~Pppa~~a-----qk~a~la~--~p~~p~~~~rvaWPqa~L~G~~~~~~   84 (637)
T COG4248          15 PGRPLGQGGEADLYTLGE--VRD-QVAKIYHAPPPAAQA-----QKVAELAA--TPDAPLLNYRVAWPQATLHGGRRGKV   84 (637)
T ss_pred             CCccccCCccceeeecch--hhc-hhheeecCCCchHHH-----HHHHHhcc--CCCCcchhhhhcccHHHhhCCCccce
Confidence            346799999999996422  222 345887643221111     11222221  1122322211111      1222 34


Q ss_pred             EEEEEccC-CC-CHHHHHH----hcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          143 ICIVFEKL-GP-SLFDFLK----RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       143 ~~lv~e~~-~~-~L~~~l~----~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      +-++|..+ |. .+..+..    +.......+..+.+.++.|+.+.+.||..|.+-+|++++|+|+.+++.         
T Consensus        85 iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~---------  155 (637)
T COG4248          85 IGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSK---------  155 (637)
T ss_pred             eEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCce---------
Confidence            78999998 43 3333332    112224778899999999999999999999999999999999966544         


Q ss_pred             CCCCCCcccCCCCCceEEeecCCccc--CCCCCcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhC-CC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTG-EA  288 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~--~~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g-~~  288 (399)
                                     +.|+|=..-..  .+...-..+|...|.+||...     +..-+...|.|.||+++++++.| +.
T Consensus       156 ---------------V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrH  220 (637)
T COG4248         156 ---------------VVLVDSDSFQINANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRH  220 (637)
T ss_pred             ---------------EEEEcccceeeccCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCC
Confidence                           45554332111  112223457899999999876     33556789999999999999986 99


Q ss_pred             CCCC
Q 015867          289 LFQT  292 (399)
Q Consensus       289 Pf~~  292 (399)
                      ||.+
T Consensus       221 PysG  224 (637)
T COG4248         221 PYSG  224 (637)
T ss_pred             CCCc
Confidence            9986

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=98.73  E-value=1.6e-07  Score=82.25  Aligned_cols=110  Identities=28%  Similarity=0.349  Sum_probs=81.7

Q ss_pred             hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC----CeEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHH
Q 015867          106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR----NHICIVFEKL-G-PSLFDFLKRNKYCPFPVDLVREFGRQLL  179 (399)
Q Consensus       106 ~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~----~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~  179 (399)
                      ......|...+..|..... ..|.   .+.+.+..    ...+||+|++ + .+|.+++.....  .+......++.+++
T Consensus        55 ~~ra~~E~~~~~~L~~~Gi-~tP~---pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~--~~~~~~~~ll~~l~  128 (206)
T PF06293_consen   55 RSRAKREWRNLQRLREAGI-PTPE---PVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ--LDPSQRRELLRALA  128 (206)
T ss_pred             chHHHHHHHHHHHHHHcCC-CCCc---EEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc--cchhhHHHHHHHHH
Confidence            3456778888888876432 2333   33333331    3568999999 4 379999887542  66677889999999


Q ss_pred             HHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCccc
Q 015867          180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       180 ~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                      ..+.-||..||+|+|+++.|||+..++                     ....+.++||+.+..
T Consensus       129 ~~i~~lH~~gi~H~Dl~~~NILv~~~~---------------------~~~~~~lIDld~~~~  170 (206)
T PF06293_consen  129 RLIAKLHDAGIYHGDLNPSNILVDPDD---------------------GQYRFYLIDLDRMRF  170 (206)
T ss_pred             HHHHHHHHCcCCCCCCCcccEEEeCCC---------------------CceeEEEEcchhcee
Confidence            999999999999999999999996432                     245799999997654

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=98.73  E-value=1.6e-07  Score=81.25  Aligned_cols=138  Identities=17%  Similarity=0.255  Sum_probs=88.2

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-hh---------HHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-YR---------DAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~---------~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      +.++|.+.+.+-......|.+.  ..+|+.+++|..+.... ..         ....+.+..+..+....   ......+
T Consensus        29 ~~~~~~~~kv~k~~~r~~ValI--ei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g---~~~~~~~  103 (229)
T PF06176_consen   29 LDNNYKIIKVFKNTKRNYVALI--EIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEG---FTEPADP  103 (229)
T ss_pred             HhCCceEEEeecCCCccEEEEE--EECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcC---ccccccc
Confidence            4678999999988777767665  45677899998864221 11         11223333333443221   1122221


Q ss_pred             ce-----eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccc
Q 015867          134 RN-----WFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEF  207 (399)
Q Consensus       134 ~~-----~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~  207 (399)
                      +.     .+......+|||||+ |..|.+...      +++    .+...+.+++.-||+.|++|+|.+|.|+++.    
T Consensus       104 yl~~ekk~~~~~~~~~ll~EYIeG~~l~d~~~------i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~----  169 (229)
T PF06176_consen  104 YLAAEKKIFRYTSSYVLLMEYIEGVELNDIED------IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVS----  169 (229)
T ss_pred             eeeeeeeeccceeEEEEEEEEecCeecccchh------cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEE----
Confidence            11     122234667999999 877776532      332    2456677889999999999999999999984    


Q ss_pred             ccCCCCcCCCCCCCCcccCCCCCceEEeecCCcc
Q 015867          208 IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA  241 (399)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~  241 (399)
                                           ++.++++||+...
T Consensus       170 ---------------------~~~i~iID~~~k~  182 (229)
T PF06176_consen  170 ---------------------NNGIRIIDTQGKR  182 (229)
T ss_pred             ---------------------CCcEEEEECcccc
Confidence                                 3449999998643

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>COG0661 AarF Predicted unusual protein kinase [General function prediction only]

Probab=98.69  E-value=6.1e-08  Score=95.23  Aligned_cols=143  Identities=20%  Similarity=0.279  Sum_probs=88.6

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch-----------------------------------hhhH------HHH
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----------------------------------KYRD------AAM  110 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------------------------~~~~------~~~  110 (399)
                      ..|+.++-|.||+|+.. +|+.||||+.+..-                                   ...+      .+.
T Consensus       131 ~PiAsASIaQVH~A~L~-sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~  209 (517)
T COG0661         131 EPIASASIAQVHRAVLK-SGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR  209 (517)
T ss_pred             CchhhhhHhhheeEEec-CCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence            56999999999999875 49999999984310                                   0011      133


Q ss_pred             HHHHHHHHhhhcCCCCCcceeeece-eeccCCeEEEEEccC-CCCHHHH--HHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015867          111 IEIDVLQHLAKNDKGGSSHCVQIRN-WFDYRNHICIVFEKL-GPSLFDF--LKRNKYCPFPVDLVREFGRQLLESVAYMH  186 (399)
Q Consensus       111 ~e~~~l~~l~~~~~~~~~~iv~~~~-~~~~~~~~~lv~e~~-~~~L~~~--l~~~~~~~~~~~~~~~i~~qi~~~L~~lH  186 (399)
                      .|...+.+++.+-. +.+.+ .+-. +++....-.|+|||+ |..+.+.  ++..+   ++...+...+.++.  +..+=
T Consensus       210 ~EA~n~~~~~~nf~-~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g---~d~k~ia~~~~~~f--~~q~~  282 (517)
T COG0661         210 REAANAERFRENFK-DDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAG---IDRKELAELLVRAF--LRQLL  282 (517)
T ss_pred             HHHHHHHHHHHHcC-CCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhcC---CCHHHHHHHHHHHH--HHHHH
Confidence            35555555554332 22222 2222 234467789999999 8788777  44433   55333222211111  22223


Q ss_pred             HCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC
Q 015867          187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN  246 (399)
Q Consensus       187 ~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~  246 (399)
                      ..|++|.|.+|.||++.                        .++.+.+.|||+....+..
T Consensus       283 ~dgffHaDpHpGNi~v~------------------------~~g~i~~lDfGi~g~l~~~  318 (517)
T COG0661         283 RDGFFHADPHPGNILVR------------------------SDGRIVLLDFGIVGRLDPK  318 (517)
T ss_pred             hcCccccCCCccceEEe------------------------cCCcEEEEcCcceecCCHH
Confidence            38999999999999994                        4678999999987654443

>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]

Probab=98.64  E-value=3.8e-07  Score=80.72  Aligned_cols=134  Identities=27%  Similarity=0.286  Sum_probs=94.0

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecc-----------------------hhhhHHHHHHHHHHHHhhhcCC
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI-----------------------RKYRDAAMIEIDVLQHLAKNDK  124 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------------------~~~~~~~~~e~~~l~~l~~~~~  124 (399)
                      +.+...||-|--+.||.|.+. .|.++|||.=+..                       ...+.....|.++|+.|.... 
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~-~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G-  170 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDP-KGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEG-  170 (304)
T ss_pred             HhhccccccCccceEEEEECC-CCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcC-
Confidence            467789999999999999865 6778999974210                       011234556888888886431 


Q ss_pred             CCCcceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 015867          125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLV  203 (399)
Q Consensus       125 ~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~  203 (399)
                         -.++.-++    -+..++|||++ |..|...-       ++......++..|+.-+..+-..||||+|+.+=||+++
T Consensus       171 ---~~VP~P~~----~nRHaVvMe~ieG~eL~~~r-------~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~  236 (304)
T COG0478         171 ---VKVPKPIA----WNRHAVVMEYIEGVELYRLR-------LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVT  236 (304)
T ss_pred             ---CCCCCccc----cccceeeeehcccceeeccc-------CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEe
Confidence               12333222    46789999999 76665431       23444556677777777777789999999999999994


Q ss_pred             ecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcc
Q 015867          204 SSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA  241 (399)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~  241 (399)
                                              .++.+.++||--+.
T Consensus       237 ------------------------~dg~~~vIDwPQ~v  250 (304)
T COG0478         237 ------------------------EDGDIVVIDWPQAV  250 (304)
T ss_pred             ------------------------cCCCEEEEeCcccc
Confidence                                    46679999997553

>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily

Probab=98.52  E-value=2.1e-06  Score=76.53  Aligned_cols=79  Identities=19%  Similarity=0.258  Sum_probs=56.0

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee---ccCCeEEEEE
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF---DYRNHICIVF  147 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~---~~~~~~~lv~  147 (399)
                      ++.|+.|..+.||++....  ..+++|..... ........|..+++.+.....    .++.++.+.   ......+++|
T Consensus         2 i~~l~~G~~n~~~~v~~~~--~~~vlK~~~~~-~~~~~~~~e~~~~~~l~~~~~----pvP~~~~~~~~~~~~~~~~~~~   74 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD--GRYVLKFYRPP-DAAERLRREAAVLRQLAEHGI----PVPRVLAFDTSDEFNGFPYLLM   74 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT--SEEEEEEESSH-HHHHHHHHHHHHHHHHHHTTS----BS--EEEEEEETEETSEEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC--cEEEEEEeCCC-CCHHHHHHHHHHHHHHHhcCC----CCceEEeecccccccccceEEE
Confidence            5789999999999997654  47999998654 455677789999999986433    244444422   2345689999


Q ss_pred             ccC-CCCHHH
Q 015867          148 EKL-GPSLFD  156 (399)
Q Consensus       148 e~~-~~~L~~  156 (399)
                      +++ |..+..
T Consensus        75 ~~i~g~~~~~   84 (239)
T PF01636_consen   75 EYIPGRPLDD   84 (239)
T ss_dssp             EEESSEEHHH
T ss_pred             EEeccccccc
Confidence            999 666666

; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....

>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]

Probab=98.49  E-value=2.7e-06  Score=74.63  Aligned_cols=136  Identities=18%  Similarity=0.177  Sum_probs=86.8

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecchhhh-------------------------HHHHHHHHHHHHhhhcCC
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------------------------DAAMIEIDVLQHLAKNDK  124 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-------------------------~~~~~e~~~l~~l~~~~~  124 (399)
                      +...|.+|--+.||+|.. .++..+|+|+++......                         .....|..-|.++.....
T Consensus        52 ~~g~istGKEA~Vy~a~~-~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGV  130 (268)
T COG1718          52 LVGCISTGKEANVYLAET-GDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGV  130 (268)
T ss_pred             eEeeecCCcceEEEeecc-CCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence            344677788889999864 567889999986422111                         112234444544443211


Q ss_pred             CCCcceeeeceeeccCCeEEEEEccCCCCH--HHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEE
Q 015867          125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSL--FDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENIL  201 (399)
Q Consensus       125 ~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L--~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIl  201 (399)
                          .+++=+.+    ..-.|||||+|...  .-.|+.-   .++...+..+..+++..+.-|-. .|+||+||..=|||
T Consensus       131 ----rvP~Pi~~----~~nVLvMEfIg~~g~pAP~LkDv---~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL  199 (268)
T COG1718         131 ----RVPEPIAF----RNNVLVMEFIGDDGLPAPRLKDV---PLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNIL  199 (268)
T ss_pred             ----CCCCceee----cCCeEEEEeccCCCCCCCCcccC---CcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheE
Confidence                11111111    23579999996541  1111111   23334678889999999998876 89999999999999


Q ss_pred             EeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCccc
Q 015867          202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       202 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                      +.                         .+.+.|+|||-|..
T Consensus       200 ~~-------------------------~~~p~iID~~QaV~  215 (268)
T COG1718         200 VH-------------------------DGEPYIIDVSQAVT  215 (268)
T ss_pred             EE-------------------------CCeEEEEECccccc
Confidence            83                         56799999997754

>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172

Probab=98.42  E-value=5e-06  Score=73.87  Aligned_cols=72  Identities=13%  Similarity=0.159  Sum_probs=50.9

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-  150 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-  150 (399)
                      ..||+|..+.||+.    .+..+++|...... .......|.++++.+.... .   .+++.+.+....+...+|||++ 
T Consensus         7 ~~i~~G~t~~~y~~----~~~~~VlR~~~~~~-~~~~i~~E~~~l~~l~~~g-l---pvP~~~~~~~~~~~~glv~e~i~   77 (226)
T TIGR02172         7 TQTGEGGNGESYTH----KTGKWMLKLYNPGF-DKETIKREFDASRKVFSLG-I---PTPHPFDLVEDGGRLGLIYELIV   77 (226)
T ss_pred             eeecCCCCcceeEe----cCCCEEEEeCCCCC-CHHHHHHHHHHHHHHHHcC-C---CCCceEEEEecCCeeeeeeeecC
Confidence            56899999999974    24457899876532 2345678999999987432 1   2455566666677788999999 


Q ss_pred             CC
Q 015867          151 GP  152 (399)
Q Consensus       151 ~~  152 (399)
                      |.
T Consensus        78 G~   79 (226)
T TIGR02172        78 GK   79 (226)
T ss_pred             Cc
Confidence            54

This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=98.39  E-value=5.6e-08  Score=94.73  Aligned_cols=185  Identities=16%  Similarity=0.101  Sum_probs=134.6

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcc-eeeeceeeccCCeEEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH-CVQIRNWFDYRNHICI  145 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~-iv~~~~~~~~~~~~~l  145 (399)
                      -|.....+++|+++.+++.+...+...+ .+.+...    -....++++|.++++      || .+..++.++.+.+..+
T Consensus       243 ws~~fh~fvK~altknpKkRptaeklL~-h~fvs~~----l~~rl~~eLLdK~n~------P~~~v~~~~d~~~E~~~~i  311 (829)
T KOG0576|consen  243 WSEFFHNFVKGALTKNPKKRPTAEKLLQ-HPFVSQT----LSRRLAIELLDKVNN------PNPVVRYLEDYDGEDYLWI  311 (829)
T ss_pred             chHHHHHHHHHHhcCCCccCCChhhhee-ceeeccc----hhhHHHHHHHHHccC------CCCcccccccCCcccccch
Confidence            3666778999999999999776655444 6665432    333446777777764      77 5555666666789999


Q ss_pred             EEccC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          146 VFEKL-GP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       146 v~e~~-~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +|+++ ++ +......... ..+...+...+.+.-+.+|+++|+..=+|+|    ||+.                     
T Consensus       312 ~~~i~s~~rs~~~~~~~se-~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~---------------------  365 (829)
T KOG0576|consen  312 PMRICSTGRSSALEMTVSE-IALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILG---------------------  365 (829)
T ss_pred             hhhhhcCCccccccCChhh-HhhhhhhhhhhhhhhcccccccccccccCcc----cccc---------------------
Confidence            99999 44 2222111111 1244555667788888999999998778999    8875                     


Q ss_pred             ccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                          .++..+..||+........  ..+..+|+.++|||+.....+....|.|++|+-..++--|-+|-..
T Consensus       366 ----s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~~  432 (829)
T KOG0576|consen  366 ----SEEEVKLLDFAVPPQLTRTMKPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRSS  432 (829)
T ss_pred             ----cccccccccccCCcccCcccccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCCC
Confidence                4566889999987665544  5678899999999999999999999999999877777777776543

>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP

Probab=98.36  E-value=1.4e-05  Score=69.01  Aligned_cols=125  Identities=21%  Similarity=0.286  Sum_probs=90.2

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch-----------------hhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----------------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ..||+|+.-.||.-  ..+ ...+||+++...                 ...+....|+.....+.......+.+|.+++
T Consensus         7 ~~i~~G~~R~cy~H--P~d-p~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~   83 (199)
T PF10707_consen    7 DLIAQGGERDCYQH--PDD-PNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY   83 (199)
T ss_pred             cccccCCCceEEEC--CCC-CCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence            46999999999954  333 336899987644                 2245566677777777633445667999999


Q ss_pred             eeeccCCeEEEEEccC---C----CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          135 NWFDYRNHICIVFEKL---G----PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~---~----~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                      ++.+++.-..+|+|.+   .    .+|.+++....   ++. .   +...+-.-..+|-+.+|+.+|++|.||++...+
T Consensus        84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~---~~~-~---~~~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~  155 (199)
T PF10707_consen   84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG---LTE-E---LRQALDEFKRYLLDHHIVIRDLNPHNIVVQRRD  155 (199)
T ss_pred             EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC---ccH-H---HHHHHHHHHHHHHHcCCeecCCCcccEEEEecC
Confidence            9999988889999976   2    37888886554   555 3   333344445677889999999999999997653

PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].

>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2

Probab=98.24  E-value=6.8e-05  Score=64.39  Aligned_cols=116  Identities=21%  Similarity=0.289  Sum_probs=81.1

Q ss_pred             CCEEEEeeeccccc-eEEEEEEEccCCeEEEEEEEec------------ch----------hhhHHHHHHHHHHHHhhhc
Q 015867           66 PRYKILSKMGEGTF-GRVLECWDRQTQERVAIKVVRS------------IR----------KYRDAAMIEIDVLQHLAKN  122 (399)
Q Consensus        66 ~~y~~~~~lG~G~~-g~V~~~~~~~~~~~vaiK~~~~------------~~----------~~~~~~~~e~~~l~~l~~~  122 (399)
                      .+++.++.||.|.- |.||+++.  .|+.||||+++.            ..          .....+..|-+...+|...
T Consensus        37 ~~I~flefLg~g~~~~~V~kv~I--~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   37 DDIEFLEFLGHGSHDGYVFKVEI--DGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CcEeeeeecCCCCceeEEEEEEE--CCeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            67999999999999 99999965  577999999421            00          1123456677777777654


Q ss_pred             CCCCCcce--eeeceeeccC------------------CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q 015867          123 DKGGSSHC--VQIRNWFDYR------------------NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES  181 (399)
Q Consensus       123 ~~~~~~~i--v~~~~~~~~~------------------~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~  181 (399)
                      .   ..++  ++.++|+.-.                  ....||.||+ ...           .+..    .-+.+|+.-
T Consensus       115 ~---~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-----------~~~~----~~~~~~~~d  176 (207)
T PF13095_consen  115 G---REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-----------PLQI----RDIPQMLRD  176 (207)
T ss_pred             c---ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------ccch----hHHHHHHHH
Confidence            3   2344  7777776211                  1346788877 322           1222    346778888


Q ss_pred             HHHHHHCCccccCCCCCcEE
Q 015867          182 VAYMHDLRLIHTDLKPENIL  201 (399)
Q Consensus       182 L~~lH~~givH~Dikp~NIl  201 (399)
                      |..+|..||+-+|+|+.|..
T Consensus       177 l~~~~k~gI~~~Dv~~~ny~  196 (207)
T PF13095_consen  177 LKILHKLGIVPRDVKPRNYR  196 (207)
T ss_pred             HHHHHHCCeeeccCcccccc
Confidence            99999999999999999986

>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]

Probab=98.23  E-value=1.3e-05  Score=78.93  Aligned_cols=146  Identities=15%  Similarity=0.136  Sum_probs=87.1

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecch--------------------------------hhhHHH------HHHH
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--------------------------------KYRDAA------MIEI  113 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------------------------~~~~~~------~~e~  113 (399)
                      +.||..+.|.||+|+.+. |+.||||+.+..-                                .....+      ..|.
T Consensus       167 ~piaaASlaQVhrA~L~~-G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA  245 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKN-GEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA  245 (538)
T ss_pred             chhhhcchhheEEEEecC-CCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence            579999999999998754 9999999974310                                011112      2233


Q ss_pred             HHHHHh----hhcCCCCCcceeeeceeeccCCeEEEEEccC-CCCHHH--HHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015867          114 DVLQHL----AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD--FLKRNKYCPFPVDLVREFGRQLLESVAYMH  186 (399)
Q Consensus       114 ~~l~~l----~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~--~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH  186 (399)
                      +-..++    .+.+....-.|++++-  .......|+|||| |..+.+  .|.+.+   ++...+..-+.+...  +-|=
T Consensus       246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~--~~st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~~--~qIf  318 (538)
T KOG1235|consen  246 KNAERFRENFKDFSLLTYVLVPKVYW--DLSTKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAYL--EQIF  318 (538)
T ss_pred             HhHHHHHHHHHhcccccceeCCeehh--hcCcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHHH--HHHH
Confidence            222222    2221111112333332  3356789999999 765544  455554   565544333222222  2233


Q ss_pred             HCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC
Q 015867          187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ  245 (399)
Q Consensus       187 ~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~  245 (399)
                      ..|++|+|=+|-||++..++                    ..+..+.+.|||+......
T Consensus       319 ~~GffHaDPHPGNilv~~~~--------------------~~~~~ivllDhGl~~~is~  357 (538)
T KOG1235|consen  319 KTGFFHADPHPGNILVRPNP--------------------EGDEEIVLLDHGLYAVISH  357 (538)
T ss_pred             hcCCccCCCCCCcEEEecCC--------------------CCCccEEEEcccccccccH
Confidence            47899999999999997543                    3477899999998765443

>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members

Probab=98.21  E-value=1.2e-05  Score=71.96  Aligned_cols=75  Identities=12%  Similarity=0.067  Sum_probs=46.0

Q ss_pred             Eeeeccccce-EEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC---CeEEEE
Q 015867           71 LSKMGEGTFG-RVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR---NHICIV  146 (399)
Q Consensus        71 ~~~lG~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~---~~~~lv  146 (399)
                      ++.|+.|+.. .||+..     ..+++|..+. .........|.++++.+........|.++   ......   ...++|
T Consensus         2 ~~~~~~gG~~n~vy~~~-----~~~VlR~~~~-~~~~~~~~~E~~~l~~L~~~~~v~vP~~~---~~~~~~~~~~~~~~l   72 (235)
T cd05155           2 IEPVDSGGTDNATFRLG-----DDMSVRLPSA-AGYAGQVRKEQRWLPRLAPHLPLPVPEPL---GKGEPGEGYPWPWSV   72 (235)
T ss_pred             ceeccCCCcccceEEcC-----CceEEEcCCc-cchHHHHHHHHHHHHHHhccCCCCCCcee---ecCCCccCCCcceEE
Confidence            3567877776 588751     2477887654 22345788899999998753223334433   322221   245889


Q ss_pred             EccC-CCCH
Q 015867          147 FEKL-GPSL  154 (399)
Q Consensus       147 ~e~~-~~~L  154 (399)
                      |+++ |.++
T Consensus        73 ~~~i~G~~l   81 (235)
T cd05155          73 YRWLEGETA   81 (235)
T ss_pred             EEeecCCCC
Confidence            9998 6554

The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=98.18  E-value=1.9e-05  Score=71.16  Aligned_cols=75  Identities=13%  Similarity=0.085  Sum_probs=51.0

Q ss_pred             eeccccc-eEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-
Q 015867           73 KMGEGTF-GRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-  150 (399)
Q Consensus        73 ~lG~G~~-g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-  150 (399)
                      .|-.|.+ +.||++...  +..+.||+.....  ......|+++++.+...  .   -+++++.+....+..++||+++ 
T Consensus         5 ~~~~g~~~~~v~~~~~~--~~~~~vk~~~~~~--~~~~~~E~~~l~~l~~~--~---~vP~v~~~~~~~~~~~lv~e~i~   75 (244)
T cd05150           5 RVTEGQSGATVYRLDGK--NPGLYLKIAPSGP--TYELEREAERLRWLAGK--L---PVPEVIDYGSDDGRAWLLTSAVP   75 (244)
T ss_pred             ecCCCCCcCeEEEEcCC--CCcEEEEecCCCc--ccchHHHHHHHHHHHhc--C---CCCeEEEEEecCCccEEEEEeeC
Confidence            3445555 789988543  3568889875432  34567799999998753  2   3555666666666789999999 


Q ss_pred             CCCHHH
Q 015867          151 GPSLFD  156 (399)
Q Consensus       151 ~~~L~~  156 (399)
                      |.+|.+
T Consensus        76 G~~l~~   81 (244)
T cd05150          76 GVPAAA   81 (244)
T ss_pred             CccHhH
Confidence            766654

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]

Probab=98.17  E-value=2.1e-05  Score=65.36  Aligned_cols=129  Identities=24%  Similarity=0.273  Sum_probs=89.4

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      -+..+.||+|.+|.||++.+.  |..+|+|+-+. +..+..+..|.++|+.+....     .-.+++.+..    .++.|
T Consensus        24 ~~v~~~L~KG~~s~Vyl~~~~--~~~~a~Kvrr~-ds~r~~l~kEakiLeil~g~~-----~~p~vy~yg~----~~i~m   91 (201)
T COG2112          24 LRVEKELAKGTTSVVYLGEWR--GGEVALKVRRR-DSPRRNLEKEAKILEILAGEG-----VTPEVYFYGE----DFIRM   91 (201)
T ss_pred             hhhhhhhhcccccEEEEeecc--CceEEEEEecC-CcchhhHHHHHHHHHHhhhcC-----CCceEEEech----hhhhh
Confidence            356678999999999999764  55799998654 456678889999999987532     2234444333    23459


Q ss_pred             ccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCC--CcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          148 EKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKP--ENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp--~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||+ |..|.++-...     +    +.-+..+++.---|-..||-|+.|.-  .||++                      
T Consensus        92 e~i~G~~L~~~~~~~-----~----rk~l~~vlE~a~~LD~~GI~H~El~~~~k~vlv----------------------  140 (201)
T COG2112          92 EYIDGRPLGKLEIGG-----D----RKHLLRVLEKAYKLDRLGIEHGELSRPWKNVLV----------------------  140 (201)
T ss_pred             hhhcCcchhhhhhcc-----c----HHHHHHHHHHHHHHHHhccchhhhcCCceeEEe----------------------
Confidence            999 77888765421     2    22344555555557778999999874  46666                      


Q ss_pred             cCCCCCceEEeecCCccc
Q 015867          225 CLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~  242 (399)
                         .+..+.|+||..|++
T Consensus       141 ---~~~~~~iIDFd~At~  155 (201)
T COG2112         141 ---NDRDVYIIDFDSATF  155 (201)
T ss_pred             ---cCCcEEEEEccchhh
Confidence               233799999998874

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=98.09  E-value=3.8e-05  Score=80.30  Aligned_cols=189  Identities=24%  Similarity=0.299  Sum_probs=124.1

Q ss_pred             CCcceeeeceeeccCCeE----EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          126 GSSHCVQIRNWFDYRNHI----CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       126 ~~~~iv~~~~~~~~~~~~----~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      .|+|++.++.|...+...    .+..++| +.++...++.-.  ..+...++.+..+++.||.++|+.       +..|+
T Consensus       240 ~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q~v~--~i~~~~~r~~~~~~~~GL~~~h~~-------~l~~v  310 (1351)
T KOG1035|consen  240 AHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQSVG--SIPLETLRILHQKLLEGLAYLHSL-------SLEHV  310 (1351)
T ss_pred             ccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHhhcc--ccCHHHHHHHHHHHhhhHHHHHHh-------cccee
Confidence            457888877766543322    3344577 778888888766  589999999999999999999998       44455


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEe--ecCCcccCCCCCc--ccccCCCccchhhhhCCCCCCc--chhH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGSTAFDNQNHS--SIVSTRHYRAPEVILGLGWSYP--CDMW  274 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~--Dfg~a~~~~~~~~--~~~gt~~y~aPE~~~~~~~~~~--~Diw  274 (399)
                      .+........              +.+..+.+.++  ||+.+........  ...-+..+.++|......+..+  .|+|
T Consensus       311 ~L~~s~~~~~--------------~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~~~~e~~~~~~~~~~r~~dL~  376 (1351)
T KOG1035|consen  311 VLSASSSKES--------------TVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIRNADEDLKENTAKKSRLTDLW  376 (1351)
T ss_pred             EEeccccccc--------------ccCccceeecchhhhcccccCCCcccchhhcCccccccccccccccchhhhhhHHH
Confidence            5433211000              11344555555  8887765444332  2234556778888877665554  7999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          275 SVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       275 slG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      .+|..+..+..|..+-.....              +..+..                                       
T Consensus       377 ~lgll~~~~~~~~~i~~~~~~--------------~~~~l~---------------------------------------  403 (1351)
T KOG1035|consen  377 CLGLLLLQLSQGEDISEKSAV--------------PVSLLD---------------------------------------  403 (1351)
T ss_pred             HHHHHHhhhhhcCcccccccc--------------hhhhhc---------------------------------------
Confidence            999999999887644221110              000000                                       


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                            ........+++.+|+.-++++|+++.+++.|+|.+-
T Consensus       404 ------~~~~~~~~d~~~~~~~~~~~~Rl~~~~ll~~~f~~~  439 (1351)
T KOG1035|consen  404 ------VLSTSELLDALPKCLDEDSEERLSALELLTHPFLRF  439 (1351)
T ss_pred             ------cccchhhhhhhhhhcchhhhhccchhhhhhchhccc
Confidence                  001114568999999999999999999999999763

>PLN02876 acyl-CoA dehydrogenase

Probab=98.06  E-value=7.7e-05  Score=79.00  Aligned_cols=80  Identities=15%  Similarity=0.130  Sum_probs=52.9

Q ss_pred             EEeeeccccceEEEEEEEccCC--eEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC---Ce
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQ--ERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR---NH  142 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~--~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~---~~  142 (399)
                      -++.|+.|.++.+|+......+  ..+++|+.....  .....+..|.++++.+.....   ..+++++.++.+.   +.
T Consensus        42 ~v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~---vpVP~v~~~~~d~~v~G~  118 (822)
T PLN02876         42 KVSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTD---VPVPKVYCLCTDASVIGT  118 (822)
T ss_pred             eEEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCC---CCCCcEEEEecCCCcCCC
Confidence            3577899999999998654332  467888764322  123467789999999863222   2345556655553   46


Q ss_pred             EEEEEccC-CC
Q 015867          143 ICIVFEKL-GP  152 (399)
Q Consensus       143 ~~lv~e~~-~~  152 (399)
                      .|+||||+ |.
T Consensus       119 ~flVME~v~G~  129 (822)
T PLN02876        119 AFYIMEYLEGR  129 (822)
T ss_pred             ceEEEEecCCc
Confidence            78999999 54

>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes

Probab=97.94  E-value=0.00014  Score=64.99  Aligned_cols=75  Identities=15%  Similarity=0.286  Sum_probs=47.2

Q ss_pred             EeeeccccceEEEEEEEcc-CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           71 LSKMGEGTFGRVLECWDRQ-TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      ++.|..|-...+|++.... .++.|++|+.............|..+++.+.....     .++++..+..    .+||||
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl-----~P~v~~~~~~----~~l~e~   73 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGL-----APKLYATFQN----GLIYEF   73 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCC-----CCeEEEEeCC----cEEEEe
Confidence            4667888888999986443 35678899875432222233468888888875432     3344443321    379999


Q ss_pred             C-CCCH
Q 015867          150 L-GPSL  154 (399)
Q Consensus       150 ~-~~~L  154 (399)
                      + |.++
T Consensus        74 i~G~~l   79 (235)
T cd05157          74 IPGRTL   79 (235)
T ss_pred             eCCCcC
Confidence            9 6544

ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo

>PRK09550 mtnK methylthioribose kinase; Reviewed

Probab=97.83  E-value=0.00064  Score=65.20  Aligned_cols=75  Identities=21%  Similarity=0.243  Sum_probs=52.7

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecc--------hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--------RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.||.|.+..||++.....++.++||.-...        .........|.+.|+.+.....   .++++++.+  +.+.
T Consensus        31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p---~~VPkV~~~--D~~~  105 (401)
T PRK09550         31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVP---DLVPKVYHY--DEEL  105 (401)
T ss_pred             eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCC---CCCCeEEEE--CCCC
Confidence            46799999999999987644467999985311        1123556778888888765432   356666665  4466


Q ss_pred             EEEEEccC
Q 015867          143 ICIVFEKL  150 (399)
Q Consensus       143 ~~lv~e~~  150 (399)
                      .++|||++
T Consensus       106 ~~lVME~L  113 (401)
T PRK09550        106 AVTVMEDL  113 (401)
T ss_pred             CEEEEecC
Confidence            88999998

>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]

Probab=97.80  E-value=0.00029  Score=65.40  Aligned_cols=136  Identities=21%  Similarity=0.265  Sum_probs=93.0

Q ss_pred             EEEeeeccccceEEEEEEEccCCeEEEEEEEecch-----------------------hh----hHHHHHHHHHHHHhhh
Q 015867           69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----------------------KY----RDAAMIEIDVLQHLAK  121 (399)
Q Consensus        69 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----------------------~~----~~~~~~e~~~l~~l~~  121 (399)
                      .|-.+|..|--+.||-|. ..+|..+|||+++..-                       ..    .-....|++-|.++..
T Consensus       147 ~inGCiSTGKEANVYHat-~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~  225 (520)
T KOG2270|consen  147 EINGCISTGKEANVYHAT-EEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNN  225 (520)
T ss_pred             ecccccccCccceeEeee-cCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHh
Confidence            566789999999999986 4677889999984200                       00    1123346667777765


Q ss_pred             cCCCCCcceeeeceeeccCCeEEEEEccCCCCHH--HHHHhcCCCCCCHHHHHHHHHHHHHHHHHH-HHCCccccCCCCC
Q 015867          122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF--DFLKRNKYCPFPVDLVREFGRQLLESVAYM-HDLRLIHTDLKPE  198 (399)
Q Consensus       122 ~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~~~L~--~~l~~~~~~~~~~~~~~~i~~qi~~~L~~l-H~~givH~Dikp~  198 (399)
                      .. ...|--+.+       ....|||+++|.+-+  -.|+..   .++...+..+..|++.-+.-| |..++||.||.-=
T Consensus       226 aG-IP~PePIlL-------k~hVLVM~FlGrdgw~aPkLKd~---~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEf  294 (520)
T KOG2270|consen  226 AG-IPCPEPILL-------KNHVLVMEFLGRDGWAAPKLKDA---SLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEF  294 (520)
T ss_pred             cC-CCCCCceee-------ecceEeeeeccCCCCcCcccccc---cCChHHHHHHHHHHHHHHHHHHHHhceeccchhhh
Confidence            43 222222222       246799999964322  222222   377778888888888888877 4568999999999


Q ss_pred             cEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcc
Q 015867          199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA  241 (399)
Q Consensus       199 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~  241 (399)
                      |+|+                         .++.++|+|-+-+.
T Consensus       295 N~Ly-------------------------hdG~lyiIDVSQSV  312 (520)
T KOG2270|consen  295 NLLY-------------------------HDGKLYIIDVSQSV  312 (520)
T ss_pred             hheE-------------------------ECCEEEEEEccccc
Confidence            9998                         46789999988654

>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]

Probab=97.75  E-value=0.00012  Score=70.52  Aligned_cols=91  Identities=22%  Similarity=0.237  Sum_probs=65.8

Q ss_pred             CcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHh
Q 015867          269 YPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK  348 (399)
Q Consensus       269 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  348 (399)
                      +++||||+|.++.++..|..-+......+....|.+..-. +.+....++                              
T Consensus       110 pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~~~~-d~~~~~~a~------------------------------  158 (725)
T KOG1093|consen  110 PKSDVWSLGFIILELYLGISLEAELTESEYLEILLKYYTD-DQELLSTAM------------------------------  158 (725)
T ss_pred             cchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhccC-chhHHHHHH------------------------------
Confidence            4999999999999999999888777777777666654322 222111110                              


Q ss_pred             hhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                             .+...-.++..+.++..+|+-..|..||...++..++-|.++
T Consensus       159 -------e~~~~~~~d~~~~~~~~~c~~~~~~ir~l~~~~~k~~i~~ev  200 (725)
T KOG1093|consen  159 -------EHLIQLLADKKRLPLLKKCLWLEPIIRPLPMELSKRCSFTEV  200 (725)
T ss_pred             -------HHHHHHhhhHhHHHHhccCCccccccccchhHHhcCccHHHH
Confidence                   111223456677899999999999999999999999888653

>cd05153 HomoserineK_II Homoserine Kinase, type II

Probab=97.63  E-value=0.00037  Score=64.62  Aligned_cols=79  Identities=13%  Similarity=0.106  Sum_probs=49.2

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeec-e--eeccCCeEEEE
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR-N--WFDYRNHICIV  146 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~-~--~~~~~~~~~lv  146 (399)
                      -++.|..|....+|+...  .+..+++|+...  ........|.++++.+..... ..|.++... +  +....+..++|
T Consensus        18 ~i~~i~~G~~n~~y~v~~--~~~~~vLr~~~~--~~~~~~~~e~~~l~~L~~~g~-~vp~~i~~~~g~~~~~~~~~~~~l   92 (296)
T cd05153          18 SFEGISAGIENTNYFVTT--DSGRYVLTLFEK--VSAEELPFFLALLDHLAERGL-PVPRPIADRDGEYLSELAGKPAAL   92 (296)
T ss_pred             heecccCccccceEEEEe--CCCcEEEEEcCC--CChHhccHHHHHHHHHHHCCC-CCCccccCCCCcEeeeeCCceEEE
Confidence            356788888889998753  334689998764  233556678889998876432 122222211 0  11234567899


Q ss_pred             EccC-CCC
Q 015867          147 FEKL-GPS  153 (399)
Q Consensus       147 ~e~~-~~~  153 (399)
                      ++++ |..
T Consensus        93 ~~~i~G~~  100 (296)
T cd05153          93 VEFLAGEH  100 (296)
T ss_pred             EEeCCCCC
Confidence            9999 544

Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.

>TIGR02721 ycfN_thiK thiamine kinase

Probab=97.62  E-value=0.00024  Score=64.45  Aligned_cols=70  Identities=14%  Similarity=0.069  Sum_probs=43.4

Q ss_pred             eccccceEEEEEEEccCCeEEEEEEEecchhhh-HHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-C
Q 015867           74 MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-DAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-G  151 (399)
Q Consensus        74 lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~  151 (399)
                      +..|-.+.+|+..  .+++.+++|......... .....|.++++.+.....  .|.++   ....    -++||||+ |
T Consensus         4 ~~~G~tn~~y~~~--~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~--~P~~i---~~~~----~~~v~e~i~G   72 (256)
T TIGR02721         4 LSGGLTNRSWRIE--HPGISFVWRPQSPVCKALGVDRQREYQILQALSALGL--APKPI---LVNE----HWLLVEWLEG   72 (256)
T ss_pred             CCCcCcCCeEEEE--eCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCC--CCceE---EEeC----CEEEEEeccC
Confidence            5567778899875  456678899764332211 235678999999876432  24433   2221    36899999 6


Q ss_pred             CCH
Q 015867          152 PSL  154 (399)
Q Consensus       152 ~~L  154 (399)
                      ..+
T Consensus        73 ~~~   75 (256)
T TIGR02721        73 EVI   75 (256)
T ss_pred             ccc
Confidence            443

Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.

>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes

Probab=97.56  E-value=0.00085  Score=62.44  Aligned_cols=75  Identities=16%  Similarity=0.130  Sum_probs=47.3

Q ss_pred             EeeeccccceEEEEEEEcc------CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           71 LSKMGEGTFGRVLECWDRQ------TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ++.|..|-...||++....      .++.|++|+.............|.++++.+.....     .++++.++..    .
T Consensus         3 i~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~-----~P~~~~~~~~----~   73 (302)
T cd05156           3 VSKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNL-----GPKLYGIFPN----G   73 (302)
T ss_pred             EEEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCC-----CCceEEEeCC----C
Confidence            3556667777889886533      25789999976543333556778899999886432     2344444432    3


Q ss_pred             EEEccC-CCCH
Q 015867          145 IVFEKL-GPSL  154 (399)
Q Consensus       145 lv~e~~-~~~L  154 (399)
                      +|++|+ |..+
T Consensus        74 ~v~e~i~G~~l   84 (302)
T cd05156          74 RIEEFIPSRTL   84 (302)
T ss_pred             chhheeCCCcC
Confidence            578888 5544

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer

>PRK05231 homoserine kinase; Provisional

Probab=97.47  E-value=0.003  Score=59.25  Aligned_cols=77  Identities=14%  Similarity=0.099  Sum_probs=46.5

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeece---eeccCCeEEEEE
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN---WFDYRNHICIVF  147 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~---~~~~~~~~~lv~  147 (399)
                      ++.|+.|....+|+.... +| .+++|++..  ........|..+++.|.... ...|.++.-.+   +....+..++++
T Consensus        27 ~~~l~~G~~n~~y~v~t~-~g-~~vLK~~~~--~~~~~l~~~~~~l~~L~~~g-lpvP~~i~~~~G~~~~~~~g~~~~l~  101 (319)
T PRK05231         27 LKGIAEGIENSNFFLTTT-QG-EYVLTLFER--LTAEDLPFFLGLMQHLAARG-VPVPAPVARRDGAALGELAGKPAAIV  101 (319)
T ss_pred             cchhccccccceEEEEeC-CC-cEEEEEecc--CChHHhHHHHHHHHHHHHCC-CCCCcceeCCCCCEeeeeCCEEEEEE
Confidence            455777887899988642 33 589998752  22344555778888887543 22334332110   112356689999


Q ss_pred             ccC-CC
Q 015867          148 EKL-GP  152 (399)
Q Consensus       148 e~~-~~  152 (399)
                      +|+ |.
T Consensus       102 ~~l~G~  107 (319)
T PRK05231        102 TFLEGK  107 (319)
T ss_pred             EecCCC
Confidence            999 54

>TIGR00938 thrB_alt homoserine kinase, Neisseria type

Probab=97.39  E-value=0.0039  Score=58.21  Aligned_cols=80  Identities=15%  Similarity=0.074  Sum_probs=47.9

Q ss_pred             EEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeece---eeccCCeEEE
Q 015867           69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN---WFDYRNHICI  145 (399)
Q Consensus        69 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~---~~~~~~~~~l  145 (399)
                      ..++.++.|....+|++.. .++ .+++|+..... .......|.+++..|..... ..|.++...+   +....+..++
T Consensus        25 ~~i~~~~~G~~n~~y~v~t-~~~-~~vLK~~~~~~-~~~~i~~e~~~l~~L~~~g~-pvp~~i~t~~g~~~~~~~g~~~~  100 (307)
T TIGR00938        25 LSLKGIAEGVENSNYLLTT-DVG-RYILTLYEKRV-KAEELPFFLALTTHLAARGL-PVPKPVKSRDGRQLSTLAGKPAC  100 (307)
T ss_pred             eeccccCCccccceEEEEe-CCC-cEEEEEecCCC-CHHHHHHHHHHHHHHHHCCC-CCCccccCCCCCeehhcCCeEEE
Confidence            3456677787789998853 334 58889875421 13445567788888865432 2333333211   1122467799


Q ss_pred             EEccC-CC
Q 015867          146 VFEKL-GP  152 (399)
Q Consensus       146 v~e~~-~~  152 (399)
                      ||+|+ |.
T Consensus       101 l~e~i~G~  108 (307)
T TIGR00938       101 LVEFLQGL  108 (307)
T ss_pred             EEEeCCCC
Confidence            99998 53

Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.

>TIGR01767 MTRK 5-methylthioribose kinase

Probab=97.28  E-value=0.004  Score=58.64  Aligned_cols=81  Identities=19%  Similarity=0.157  Sum_probs=51.6

Q ss_pred             eeccccceEEEEEEEccCCeEEEEEEEecc--------hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           73 KMGEGTFGRVLECWDRQTQERVAIKVVRSI--------RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        73 ~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .||.|....||++.+...++.++||.-...        .....+...|.+.|+.......   ..+++++.  -+.+...
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P---~~vP~vy~--~D~e~~~   76 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVP---HLVPRIFH--FDTEMAV   76 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCc---cccCeEEE--Eccccce
Confidence            479999999999987544467999975321        1223445568888877665332   24555544  4456777


Q ss_pred             EEEccC--CCCHHHHH
Q 015867          145 IVFEKL--GPSLFDFL  158 (399)
Q Consensus       145 lv~e~~--~~~L~~~l  158 (399)
                      +|||++  ...|.+.+
T Consensus        77 ~vMEdL~~~~ilR~~L   92 (370)
T TIGR01767        77 TVMEDLSHHKIARKGL   92 (370)
T ss_pred             ehHhhCccchHHHHHH
Confidence            999998  33444444

This enzyme is involved in the methionine salvage pathway in certain bacteria.

>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]

Probab=97.15  E-value=0.0006  Score=62.33  Aligned_cols=121  Identities=20%  Similarity=0.217  Sum_probs=79.1

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-------hh----------------hHHHHHHHHHHHHhhhcCC
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KY----------------RDAAMIEIDVLQHLAKNDK  124 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~----------------~~~~~~e~~~l~~l~~~~~  124 (399)
                      +.+...||-|--+.||.+-+ ..|.+.++|.=+...       ..                +-....|...++.|.....
T Consensus        94 ~svGnqIGVGKESDIY~v~d-~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gf  172 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVAD-EEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGF  172 (465)
T ss_pred             hhhccccccccccceEEEec-CCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCC
Confidence            67888999999999999865 457788998642111       00                1123346666666654221


Q ss_pred             CCCcceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 015867          125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLV  203 (399)
Q Consensus       125 ~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~  203 (399)
                          -++.-+    +-+..|+|||++ |-.|.+.-.-        ..+..+...+..-+--|-..|+||+|.+-=||++.
T Consensus       173 ----pVPkpi----D~~RH~Vvmelv~g~Pl~~v~~v--------~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~  236 (465)
T KOG2268|consen  173 ----PVPKPI----DHNRHCVVMELVDGYPLRQVRHV--------EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVK  236 (465)
T ss_pred             ----CCCCcc----cccceeeHHHhhcccceeeeeec--------CChHHHHHHHHHHHHHHHHcCceecccchheeEEe
Confidence                122222    246789999999 7777654321        12334566667777788899999999999999995


Q ss_pred             ec
Q 015867          204 SS  205 (399)
Q Consensus       204 ~~  205 (399)
                      ++
T Consensus       237 dd  238 (465)
T KOG2268|consen  237 DD  238 (465)
T ss_pred             cC
Confidence            43

>PRK10593 hypothetical protein; Provisional

Probab=97.13  E-value=0.0047  Score=57.29  Aligned_cols=108  Identities=15%  Similarity=0.120  Sum_probs=73.8

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec---cCCeEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD---YRNHIC  144 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~---~~~~~~  144 (399)
                      -.-.+.||.|..+.||..... ++ .+.+|..+. ......+..|.+.++.+......   .++++++++.   ..+..+
T Consensus        16 ~~~~~~i~~G~~~~vy~~~~~-~~-~~~~k~~~~-~~~~~~~~~Ea~~L~~L~~~~~v---pVP~V~~~~~~~~~~g~~~   89 (297)
T PRK10593         16 LSRVECISEQPYAALWALYDS-QG-NPMPLMARS-FSTPGVAQQEAWKLSMLARSGTV---RMPTVYGVMTHEQSPGPDV   89 (297)
T ss_pred             hheeeecCCccceeEEEEEcC-CC-CEEEEEecc-cccchHHHHHHHHHHHHccCCCC---CcCcEEEEeccCCcCCCeE
Confidence            345678999999999988532 23 467787543 22346788899999999764322   4555555443   346799


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL  188 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~  188 (399)
                      ||||++ |.++.+.       .........+..+++.+|..||+.
T Consensus        90 LVmE~i~G~~~~~~-------~~~~~~~~~l~~~l~~~La~LH~~  127 (297)
T PRK10593         90 LLLERLRGVSVEAP-------ARTPERWEQLKDQIVEGLLAWHRI  127 (297)
T ss_pred             EEEeccCCEecCCC-------CCCHHHHHHHHHHHHHHHHHHhCC
Confidence            999999 7666641       123444556778889999999975

>PRK12396 5-methylribose kinase; Reviewed

Probab=97.01  E-value=0.0073  Score=57.59  Aligned_cols=75  Identities=24%  Similarity=0.300  Sum_probs=51.5

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEec----c---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRS----I---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~----~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++.||.|.-.-||++.+...++.|+||.-..    .   ....++...|.+.|+.+.....   .++++++.  -+.+..
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P---~~VP~vy~--~D~e~~  108 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAP---GLVPKVYL--FDSVMN  108 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCC---CcCCeEEE--ECcHHh
Confidence            6778999999999998744456799997521    1   1223556678889988776443   24555544  456677


Q ss_pred             EEEEccC
Q 015867          144 CIVFEKL  150 (399)
Q Consensus       144 ~lv~e~~  150 (399)
                      .+|||++
T Consensus       109 ~~vMEdL  115 (409)
T PRK12396        109 CCVMEDL  115 (409)
T ss_pred             hHHHHhC
Confidence            8899988

>PLN02236 choline kinase

Probab=97.00  E-value=0.0091  Score=56.65  Aligned_cols=76  Identities=11%  Similarity=0.038  Sum_probs=45.3

Q ss_pred             EEeeeccccceEEEEEEEcc----CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           70 ILSKMGEGTFGRVLECWDRQ----TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~----~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      -+..|-.|-...+|++....    .++.|++|+........-....|..+++.+.....     -.++++.+...    .
T Consensus        40 ~i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~idR~~E~~~~~~l~~~gl-----~P~~~~~~~~g----~  110 (344)
T PLN02236         40 QVIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFDRDDEIRTFECMSRHGQ-----GPRLLGRFPNG----R  110 (344)
T ss_pred             EEEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeechHHHHHHHHHHHHcCC-----CCceEEEECCc----e
Confidence            33455557778899886432    24679999886533332334668889998876433     22334444332    5


Q ss_pred             EEccC-CCCH
Q 015867          146 VFEKL-GPSL  154 (399)
Q Consensus       146 v~e~~-~~~L  154 (399)
                      |.+|+ +.+|
T Consensus       111 v~efi~g~~l  120 (344)
T PLN02236        111 VEEFIHARTL  120 (344)
T ss_pred             EEEeeCCCCC
Confidence            78887 5444

>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]

Probab=96.96  E-value=0.0003  Score=75.75  Aligned_cols=140  Identities=13%  Similarity=-0.006  Sum_probs=102.2

Q ss_pred             Ccceeeeceeecc--CCeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---C--ccccCCC
Q 015867          127 SSHCVQIRNWFDY--RNHICIVFEKL-GPSLFDFLKRNKY--CPFPVDLVREFGRQLLESVAYMHDL---R--LIHTDLK  196 (399)
Q Consensus       127 ~~~iv~~~~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---g--ivH~Dik  196 (399)
                      |+++...+.-...  ....+.+++|+ +|.+++.|-+.-.  ..+....+-....+.+.+..-+|+.   |  -+|+++|
T Consensus      1288 h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lk 1367 (2724)
T KOG1826|consen 1288 HYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLTNLGNTNVSKSLK 1367 (2724)
T ss_pred             ceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcccCCccchhhhhh
Confidence            3555443332222  34668999999 9999999876432  2244444444555557777777764   2  7899999


Q ss_pred             CCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchh
Q 015867          197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDM  273 (399)
Q Consensus       197 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~Di  273 (399)
                      +-|.+|.                        .+..+++.++|+.+..+.   ..+..++++.|++|++.....++.++|+
T Consensus      1368 f~lpmIV------------------------tny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N~ik~t~rsdi 1423 (2724)
T KOG1826|consen 1368 FTLPMIV------------------------TNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKNEIKFTKRSDI 1423 (2724)
T ss_pred             hhcccee------------------------cCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHHHHhhhhHHHH
Confidence            9999984                        467799999999873222   2356678999999999999899999999


Q ss_pred             HHHHHHHHHHHhCCCCC
Q 015867          274 WSVGCILVELCTGEALF  290 (399)
Q Consensus       274 wslG~il~ell~g~~Pf  290 (399)
                      |..|+.+|..-.|..+|
T Consensus      1424 lr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1424 LRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred             HHHHHHHHHHhcccHHH
Confidence            99999999988887665

>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2')

Probab=96.84  E-value=0.015  Score=53.42  Aligned_cols=46  Identities=17%  Similarity=0.083  Sum_probs=29.1

Q ss_pred             ccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhc
Q 015867           75 GEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN  122 (399)
Q Consensus        75 G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~  122 (399)
                      ++|-...|+.+. ..+|+.+++|.-+.. ........|.+++..+...
T Consensus        20 ~~g~~~~v~~i~-~~~g~~~VlR~p~~~-~~~~~l~rE~~vL~~L~~~   65 (276)
T cd05152          20 ESGLDFQVVFAK-DTDGVPWVLRIPRRP-DVSERAAAEKRVLALVRKH   65 (276)
T ss_pred             CCcceeEEEEEE-cCCCCeEEEEecCCH-HHHHHHHHHHHHHHHHHhc
Confidence            444444556552 235678889977532 2235578899999999753

MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported

>PLN02421 phosphotransferase, alcohol group as acceptor/kinase

Probab=96.83  E-value=0.014  Score=55.02  Aligned_cols=75  Identities=12%  Similarity=0.224  Sum_probs=44.0

Q ss_pred             EeeeccccceEEEEEEEccC---CeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           71 LSKMGEGTFGRVLECWDRQT---QERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      ++.|..|-...+|++.....   +..|++|+........-....|..+++.+......     ++++.++.. +   +|.
T Consensus        19 i~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~~IdR~~E~~il~~l~~~gl~-----P~~l~~~~~-G---~i~   89 (330)
T PLN02421         19 VERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDYVIDRERELQAIKYLSAAGFG-----AKLLGVFGN-G---MIQ   89 (330)
T ss_pred             EEEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCeEechHHHHHHHHHHHhcCCC-----CceeEEeCC-c---Eee
Confidence            34454466678898864332   33788998754333333345688899988764432     334444432 2   478


Q ss_pred             ccC-CCCH
Q 015867          148 EKL-GPSL  154 (399)
Q Consensus       148 e~~-~~~L  154 (399)
                      +|+ |.+|
T Consensus        90 ~fi~g~~l   97 (330)
T PLN02421         90 SFINARTL   97 (330)
T ss_pred             hhhcCCCC
Confidence            887 5443

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=96.70  E-value=0.006  Score=52.43  Aligned_cols=96  Identities=22%  Similarity=0.205  Sum_probs=69.9

Q ss_pred             HHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-CCCHHHH---HHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015867          111 IEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF---LKRNKYCPFPVDLVREFGRQLLESVAYMH  186 (399)
Q Consensus       111 ~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~---l~~~~~~~~~~~~~~~i~~qi~~~L~~lH  186 (399)
                      .|.-+++.+...     ++++++++++..    ++|.||. .+++...   +....  .-++....+|+.+++..+++++
T Consensus         8 ~E~lll~~l~~~-----~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~--~~~w~~R~~iA~~lL~~l~~l~   76 (188)
T PF12260_consen    8 NEPLLLQLLQGS-----EPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFL--QSPWEQRAKIALQLLELLEELD   76 (188)
T ss_pred             cHHHHHHHcCCC-----CCCCCeeeECCC----EEEEEeecCcccccccccccccc--ccCHHHHHHHHHHHHHHHHHHh
Confidence            367778887752     488999997732    5688998 4555321   11111  3688999999999999999998


Q ss_pred             H---CCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcc
Q 015867          187 D---LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA  241 (399)
Q Consensus       187 ~---~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~  241 (399)
                      .   ..+.-.|++++|+-+++                        ++.+|++|.....
T Consensus        77 ~~~~~~~~lcDv~~~nfgv~~------------------------~~~lk~iDld~v~  110 (188)
T PF12260_consen   77 HGPLGFFYLCDVSPDNFGVND------------------------DGRLKLIDLDDVF  110 (188)
T ss_pred             cCCCCcEEEeecchHHeEEeC------------------------CCcEEEEechhcc
Confidence            7   34778999999999954                        4568888887543

Proteins in this uncharacterised family are described as transmembrane proteins.

>PRK11768 serine/threonine protein kinase; Provisional

Probab=96.48  E-value=0.094  Score=49.35  Aligned_cols=71  Identities=17%  Similarity=0.115  Sum_probs=42.2

Q ss_pred             cceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeece--eeccCCeEEEEEccC
Q 015867           78 TFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN--WFDYRNHICIVFEKL  150 (399)
Q Consensus        78 ~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~--~~~~~~~~~lv~e~~  150 (399)
                      .-..||+... .++..+++|+.+...........|.+.+..|...... .+-.+..-+  ....++..+.|++++
T Consensus        37 ~eN~vy~v~~-~~~~~~vlKv~r~~~~~~~~i~~E~~~l~~L~~~gip-v~~p~~~~G~~~~~~~g~~~~l~~~~  109 (325)
T PRK11768         37 YENRVYQFGD-EDGRRVVAKFYRPERWSDAQILEEHAFALELAEAEIP-VVAPLAFNGQTLHEHQGFRFALFPRR  109 (325)
T ss_pred             ccceEEEEec-CCCCEEEEEEcCcccCCHHHHHHHHHHHHHHHHCCCC-CCCCccCCCCEEEEECCEEEEEEeee
Confidence            3457888753 3456799998864433455667788898888764321 111111111  122356788899998

>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]

Probab=96.44  E-value=0.041  Score=51.58  Aligned_cols=79  Identities=18%  Similarity=0.158  Sum_probs=48.1

Q ss_pred             eeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee--ccCC--eEEEEEc
Q 015867           73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF--DYRN--HICIVFE  148 (399)
Q Consensus        73 ~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~--~~~~--~~~lv~e  148 (399)
                      .|.+ .-..||+.... +|+ +++|+.+.. ........|...++.|......-..-+..+-+-.  .-..  +.+-|++
T Consensus        33 ~l~s-~eN~~f~~~~~-~g~-~iLki~~~~-~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~  108 (331)
T COG2334          33 GLNS-EENSNFRVQTE-DGR-YILKIYRPG-WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFE  108 (331)
T ss_pred             cccc-ccCceEEEEec-CCC-eEEEEecCC-CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEE
Confidence            3444 45578887543 333 599999876 5667788889999998865432111122222211  1234  7888999


Q ss_pred             cC-CCCHH
Q 015867          149 KL-GPSLF  155 (399)
Q Consensus       149 ~~-~~~L~  155 (399)
                      |+ |..+.
T Consensus       109 ~l~G~~~~  116 (331)
T COG2334         109 YLPGRPLE  116 (331)
T ss_pred             ecCCcCcC
Confidence            99 55544

>TIGR02906 spore_CotS spore coat protein, CotS family

Probab=96.43  E-value=0.11  Score=48.51  Aligned_cols=67  Identities=13%  Similarity=0.276  Sum_probs=39.1

Q ss_pred             EEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeece---eeccCCeEEEEEccC-CCC
Q 015867           81 RVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN---WFDYRNHICIVFEKL-GPS  153 (399)
Q Consensus        81 ~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~---~~~~~~~~~lv~e~~-~~~  153 (399)
                      .||++.. ..| .+++|++...   ......+..++..|..... ..|.++...+   +...++..++|++|+ |.+
T Consensus        11 ~v~~v~t-~~g-~~~LK~~~~~---~~~~~~~~~~~~~L~~~g~-~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~   81 (313)
T TIGR02906        11 NVYKVET-DSG-NKCLKKINYP---PERLLFILGAQEHLRKNGF-NIPKILKTKDGELYVKYNGDLYVLTEWIEGRE   81 (313)
T ss_pred             cEEEEEe-CCC-CeEEEEcCCC---HHHHHHHHHHHHHHHHcCC-CCCceeecCCCCEEEEECCEEEEEehhccCcC
Confidence            4888753 233 5899987532   2345557778888865433 3334433211   112356789999999 533

Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.

>PLN02756 S-methyl-5-thioribose kinase

Probab=96.34  E-value=0.046  Score=52.54  Aligned_cols=74  Identities=15%  Similarity=0.156  Sum_probs=48.6

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEec-----ch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRS-----IR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ..+.||.|....||+..+.  ++.|+||.-..     ..   ........|...|+.+.....   .++++++.+..  +
T Consensus        36 ~~~eiggGn~N~VyrV~~~--~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p---~~VPkVy~~de--d  108 (418)
T PLN02756         36 KIKEVGDGNLNFVYIVVSS--SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCP---DHVPEVYHFDR--T  108 (418)
T ss_pred             eEEEcCCCceeeEEEEEcC--CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCC---CCCCeEEEECC--C
Confidence            4678999999999998763  44689997641     11   123344556777776654322   35666666554  5


Q ss_pred             eEEEEEccC
Q 015867          142 HICIVFEKL  150 (399)
Q Consensus       142 ~~~lv~e~~  150 (399)
                      ..+++||++
T Consensus       109 ~~vlvME~L  117 (418)
T PLN02756        109 MALIGMRYL  117 (418)
T ss_pred             CCEEEEeec
Confidence            578889999

>PRK06148 hypothetical protein; Provisional

Probab=96.05  E-value=0.092  Score=57.04  Aligned_cols=82  Identities=13%  Similarity=0.097  Sum_probs=46.3

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhc-CCCCCcceeeece-----eecc-CC--e
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN-DKGGSSHCVQIRN-----WFDY-RN--H  142 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~-~~~~~~~iv~~~~-----~~~~-~~--~  142 (399)
                      +.|+ |..-.+|+... .+|..|++|+.+... .......|.+++..|... .....|.++...+     .... ++  .
T Consensus        31 ~~L~-s~~d~nf~v~~-~~g~~yVLKi~~~~~-~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~  107 (1013)
T PRK06148         31 TPLD-GERDLNFRLTT-DDGADYILKIVNPSE-PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR  107 (1013)
T ss_pred             eecC-CcCCceEEEEe-CCCCeEEEEEcCCcc-chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence            4454 34567777753 456679999987532 233445566778777654 2233444444321     1111 22  5


Q ss_pred             EEEEEccC-CCCHHH
Q 015867          143 ICIVFEKL-GPSLFD  156 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~  156 (399)
                      .+.+++|+ |..+.+
T Consensus       108 ~vrLl~~l~G~~l~~  122 (1013)
T PRK06148        108 LLRLLSWLPGTPLAE  122 (1013)
T ss_pred             EEEEEeccCCCcHHh
Confidence            67889999 656544

>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2

Probab=95.80  E-value=0.028  Score=49.23  Aligned_cols=54  Identities=17%  Similarity=0.126  Sum_probs=31.8

Q ss_pred             CeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-CCC
Q 015867           91 QERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPS  153 (399)
Q Consensus        91 ~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~  153 (399)
                      ++.|+|++.............|..+++.+....     .-+.+++.+...    .|.+|+ |.+
T Consensus         2 ~~~~~~Ri~g~~t~~~idr~~E~~~~~~l~~~g-----~~p~~~~~~~~g----~v~e~i~g~~   56 (211)
T PF01633_consen    2 PEKYLVRIPGEGTENFIDRENENEALKLLSEAG-----LGPKIIYFFENG----RVEEFIEGRT   56 (211)
T ss_dssp             TSEEEEEEEESCGCSHHHHHHHHHHHHHHHHTT-----SSS-EEEEETTE----EEEE--SSEE
T ss_pred             CCEEEEEeCCCCcccccCHHHHHHHHHHHHHcC-----CCCeEEEEcCCC----cEEEEecccc
Confidence            356888988766555566677889999888643     234445544332    455777 433

7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....

>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]

Probab=95.62  E-value=0.11  Score=48.31  Aligned_cols=75  Identities=15%  Similarity=0.092  Sum_probs=38.3

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEec---chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC--eEE
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN--HIC  144 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--~~~  144 (399)
                      +++.+-.|-.-.+|....  +++.+++. ...   ..........|.++++.+....    .-+...+..+.++.  ..+
T Consensus        29 ~v~~~~~G~sn~t~~~~~--~~~~~vlR-~P~~~~~~~~~~~~~re~~~i~~l~~~~----vP~p~~~~~~~~~~~g~pf  101 (321)
T COG3173          29 IVEEISGGWSNDTFRLGD--TGQKYVLR-KPPRGDPVESAHDEKREYRVIAALLDVD----VPVPRAFGLCGEGYLGTPF  101 (321)
T ss_pred             eeeeccCCcccceEEEec--CCceEEEe-cCCccccchhhhHHHhHHHHHHHhcCCC----CCCcccccccccCCCCCce
Confidence            344443333334444433  26667777 221   1122244455777777765421    12334455555444  779


Q ss_pred             EEEccC-C
Q 015867          145 IVFEKL-G  151 (399)
Q Consensus       145 lv~e~~-~  151 (399)
                      .||+|+ |
T Consensus       102 ~v~~~veG  109 (321)
T COG3173         102 YVMEWVEG  109 (321)
T ss_pred             EEEEEecc
Confidence            999999 5

>PTZ00384 choline kinase; Provisional

Probab=95.38  E-value=0.2  Score=48.12  Aligned_cols=76  Identities=18%  Similarity=0.227  Sum_probs=41.6

Q ss_pred             EEeeeccccceEEEEEEEccC-CeE-----EEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           70 ILSKMGEGTFGRVLECWDRQT-QER-----VAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~-~~~-----vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      .++.|..|-...+|++..... +..     |.+++........-.-..|.++++.+....     .-.++++.+..    
T Consensus        54 ~i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~~~l~IdR~~E~~i~~~Ls~~g-----lgP~l~~~f~~----  124 (383)
T PTZ00384         54 EIKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTYNSLVIDNDLQYNIAKLLGDNN-----FGPKIIGRFGD----  124 (383)
T ss_pred             EEEEeCCcccceEEEEEecCCCCCccccceEEEEeccCCCceEeccHHHHHHHHHHHhCC-----CCCeEEEecCC----
Confidence            344565677789998864332 122     344432111111222355888888887543     23455555542    


Q ss_pred             EEEEccC-CCCH
Q 015867          144 CIVFEKL-GPSL  154 (399)
Q Consensus       144 ~lv~e~~-~~~L  154 (399)
                      ++|.||+ |.+|
T Consensus       125 g~l~efIeGr~l  136 (383)
T PTZ00384        125 FTIQEWVEGNTM  136 (383)
T ss_pred             EEEEEEeccccC
Confidence            5888988 5543

>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]

Probab=95.24  E-value=0.075  Score=50.55  Aligned_cols=62  Identities=24%  Similarity=0.378  Sum_probs=45.9

Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCccccCCCCCcEEEeecc
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH-DLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH-~~givH~Dikp~NIll~~~~  206 (399)
                      ...||-+|. |.++..++....   .++...+.++.-...||--|- -.+++|.|++|.||++.-..
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~~~---~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlirf~~  382 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKWKS---QPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIRFNK  382 (565)
T ss_pred             cceeeeeccccccHHhhhhccc---ChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEEecC
Confidence            345666777 888988887654   567777777777777765543 46799999999999996543

>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]

Probab=94.33  E-value=0.28  Score=46.12  Aligned_cols=73  Identities=16%  Similarity=0.203  Sum_probs=56.2

Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      ...+.|++|++-|+++.-.-      .-...++..++.+.+..|.-+..+ ..-|||+..+||||               
T Consensus       297 e~~y~yl~~kdhgt~is~ik------~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLI---------------  355 (488)
T COG5072         297 ETLYLYLHFKDHGTPISIIK------ADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILI---------------  355 (488)
T ss_pred             CceEEEEEEecCCceeeeee------cccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceee---------------
Confidence            34578999999888775321      245667778888888877777655 58899999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCccc
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                               + +|.+.|+||-+++.
T Consensus       356 ---------d-~GnvtLIDfklsRl  370 (488)
T COG5072         356 ---------D-EGNVTLIDFKLSRL  370 (488)
T ss_pred             ---------e-cCceEEEEeeeeec
Confidence                     3 77899999998874

>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []

Probab=94.33  E-value=0.36  Score=44.42  Aligned_cols=98  Identities=16%  Similarity=0.151  Sum_probs=62.4

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      -+-.+.++.|....+|+..  .+++.+.||+-.  ......+..|.+-|+.|.....   -.+++++.+....+..+|||
T Consensus        19 i~~~~~v~GG~i~~a~~~~--~~~~~~FvK~~~--~~~~~~f~~Ea~gL~~L~~~~~---~~vP~vi~~G~~~~~~fLll   91 (288)
T PF03881_consen   19 ITSIEPVSGGDINEAYRLD--TDGGSYFVKVNS--ESGRDMFEGEAEGLKALAEANP---IRVPKVIAWGEYDDDAFLLL   91 (288)
T ss_dssp             --EEEEE--SSSSEEEEEE--TTS-EEEEEEEE--GGGCCHHHHHHHHHHHHCHTTT---SBS--EEEEEE-SSCCEEEE
T ss_pred             eeeeEecCCCChhheEEEE--CCCccEEEEecC--hhhHHHHHHHHHHHHHHHhcCC---CCCCeEEEEEeecCCceEEE
Confidence            3456779999999999875  677789999876  3445678889999999966443   35677777777777779999


Q ss_pred             ccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015867          148 EKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD  187 (399)
Q Consensus       148 e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~  187 (399)
                      ||+...-     ..    .      .-...+...|+.||+
T Consensus        92 e~l~~~~-----~~----~------~~~~~lg~~LA~LH~  116 (288)
T PF03881_consen   92 EFLEMGS-----PS----P------PDWEELGRQLAALHQ  116 (288)
T ss_dssp             E-----------------C------CHHHHHHHHHHHHHH
T ss_pred             EeecCCC-----CC----c------hhHHHHHHHHHHHhh
Confidence            9983221     00    1      124567788889998

Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.

>PTZ00296 choline kinase; Provisional

Probab=94.29  E-value=0.56  Score=46.05  Aligned_cols=74  Identities=18%  Similarity=0.162  Sum_probs=44.3

Q ss_pred             EEeeeccccceEEEEEEEcc--------CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           70 ILSKMGEGTFGRVLECWDRQ--------TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~--------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      -++.|..|-.-.+|++....        .++.|.+++.-.....--....|..+++.+.....+     .++++.+.   
T Consensus       109 ~i~~l~gGlTN~~f~v~~~~~~~~~~~~~~~~~lvRiyG~~te~lIdR~~E~~v~~~ls~~gi~-----P~l~~~f~---  180 (442)
T PTZ00296        109 RVNQILSGLTNQLFEVSLKEETANNYPSIRRRVLFRIYGKDVDELYNPISEFEVYKTMSKYRIA-----PQLLNTFS---  180 (442)
T ss_pred             EEEEecCcccCceEEEEecCCCCccccCcCceEEEEecCCCccceeCHHHHHHHHHHHHHCCCC-----CceEEEeC---
Confidence            45667667667888886432        146788998754333223445688888888764432     23444443   


Q ss_pred             eEEEEEccC-CC
Q 015867          142 HICIVFEKL-GP  152 (399)
Q Consensus       142 ~~~lv~e~~-~~  152 (399)
                       -+.|.+|+ |.
T Consensus       181 -gg~I~efi~g~  191 (442)
T PTZ00296        181 -GGRIEEWLYGD  191 (442)
T ss_pred             -CCEEEEeeCCc
Confidence             23467777 54

>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]

Probab=93.27  E-value=0.87  Score=40.15  Aligned_cols=72  Identities=19%  Similarity=0.220  Sum_probs=50.7

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL  150 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  150 (399)
                      +.+-.|-.-..|...+  ....|.+|+-.  ......+..|+.-|+.+...+.   ..+.+++.+..+.++.|+||||+
T Consensus        22 ~~v~gG~inea~~v~d--g~~~~FvK~n~--~~~~~~f~AEa~gL~~la~s~t---i~VP~vi~~G~~~~~sylVle~L   93 (286)
T COG3001          22 EEVSGGDINEAWRLRD--GTDPFFVKCNQ--REQLSMFTAEADGLELLARSNT---ITVPKVIAVGASRDHSYLVLEYL   93 (286)
T ss_pred             cccCCccccceeEeec--CCcceEEEecc--hhhHHHHHHHHHHHHHHHhcCC---ccccceEEecCCCCeeEEEEeec
Confidence            4455555556665533  34568888643  3344677889998998887653   36677778888899999999998

>PF07387 Seadorna_VP7: Seadornavirus VP7; InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length

Probab=92.89  E-value=0.6  Score=40.90  Aligned_cols=96  Identities=19%  Similarity=0.264  Sum_probs=60.6

Q ss_pred             EEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHH
Q 015867           94 VAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL  170 (399)
Q Consensus        94 vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~  170 (399)
                      ..+|.+++..-  ...-+..+..++..+.        .|+++..  ++.-.+-+++|+| .....           ..  
T Consensus        88 L~lKKi~slp~~~~~~~y~nky~v~Armh--------GilrL~N--Dn~~~yGvIlE~Cy~~~i~-----------~~--  144 (308)
T PF07387_consen   88 LFLKKIRSLPCCINDALYFNKYRVFARMH--------GILRLKN--DNNYKYGVILERCYKIKIN-----------FS--  144 (308)
T ss_pred             hhhhhccCCCcccchhhhhhhhhHHHHhh--------heeEeec--CCCceeEEEEeeccCcccc-----------hh--
Confidence            44565554332  2344566777887764        6777774  2444677999998 33211           11  


Q ss_pred             HHHHHHHHHHHHHHHHH--CCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecC
Q 015867          171 VREFGRQLLESVAYMHD--LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG  238 (399)
Q Consensus       171 ~~~i~~qi~~~L~~lH~--~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg  238 (399)
                        .++.-=+.+|.-.|+  .+.+|+|..|+|||-                        ++.+-+||.|-+
T Consensus       145 --N~i~agi~~L~~fH~~~~~~lHGD~np~NiM~------------------------D~~G~lKlVDP~  188 (308)
T PF07387_consen  145 --NFITAGIKDLMDFHSENQHCLHGDCNPDNIMC------------------------DKFGYLKLVDPV  188 (308)
T ss_pred             --HHHHHhHHHHHHhhccCCCeecCCCChhheee------------------------cCCCCEEecChh
Confidence              111112456778884  469999999999996                        567778888866

The function of this family is unknown.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	399
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		2e-93
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		2e-86
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		3e-86
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		3e-86
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		1e-85
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		2e-84
3llt_A	360	Crystal Structure Of Pf14_0431, Kinase Domain Lengt		4e-69
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		6e-53
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		7e-53
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-52
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		2e-50
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		3e-50
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-49
2x7g_A	389	Structure Of Human Serine-Arginine-Rich Protein-Spe		1e-39
1wbp_A	397	Srpk1 Bound To 9mer Docking Motif Peptide Length =		1e-39
3beg_A	381	Crystal Structure Of Sr Protein Kinase 1 Complexed		1e-39
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		1e-38
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		1e-38
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		6e-31
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		8e-31
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		8e-31
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		2e-30
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-30
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-30
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-30
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		3e-30
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		3e-30
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		3e-30
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		4e-30
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		4e-30
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		4e-30
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		4e-30
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		4e-30
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		5e-30
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		6e-30
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-30
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		6e-30
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		6e-30
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		6e-30
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		7e-30
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		7e-30
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		7e-30
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		7e-30
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		7e-30
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		8e-30
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		8e-30
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		8e-30
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		8e-30
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		9e-30
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		1e-29
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		1e-29
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		2e-29
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		2e-29
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-27
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		5e-27
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		7e-27
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		8e-27
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		9e-27
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-26
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		1e-26
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		2e-26
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		2e-26
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		2e-26
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		2e-26
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		2e-26
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		2e-26
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		2e-26
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		2e-26
2oza_B	366	Structure Of P38alpha Complex Length = 366		2e-26
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		2e-26
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		3e-26
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		3e-26
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		3e-26
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		3e-26
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		3e-26
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		3e-26
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		3e-26
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		3e-26
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		3e-26
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		3e-26
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		3e-26
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		3e-26
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		3e-26
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		3e-26
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		3e-26
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		3e-26
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		3e-26
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		3e-26
3hec_A	348	P38 In Complex With Imatinib Length = 348		3e-26
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		4e-26
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		4e-26
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		4e-26
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		4e-26
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		4e-26
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		4e-26
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		4e-26
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		4e-26
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		4e-26
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		4e-26
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		4e-26
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		4e-26
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		4e-26
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		6e-26
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		6e-26
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		6e-26
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		6e-26
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		7e-26
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		8e-26
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-26
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		9e-26
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		2e-25
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		2e-25
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		3e-25
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		3e-25
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		4e-25
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		4e-25
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		5e-25
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-25
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-24
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-24
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		3e-24
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		9e-24
4exu_A	371	Mapk13, Inactive Form Length = 371		1e-23
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		1e-23
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-23
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		5e-23
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		9e-23
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		1e-22
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		2e-22
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		2e-22
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		2e-22
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		2e-22
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		3e-22
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		4e-22
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-22
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		6e-22
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		6e-22
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-22
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-22
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		6e-22
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		6e-22
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		6e-22
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		6e-22
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		6e-22
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		6e-22
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		6e-22
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		7e-22
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		7e-22
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		7e-22
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		7e-22
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		7e-22
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		7e-22
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		8e-22
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		8e-22
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		1e-21
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		1e-21
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		1e-21
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		1e-21
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		1e-21
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		1e-21
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-21
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-21
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		2e-21
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-21
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-21
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		2e-21
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		3e-21
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-21
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		4e-21
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		5e-21
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		5e-21
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		7e-21
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		7e-21
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		8e-21
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		8e-21
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		8e-21
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		8e-21
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		8e-21
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		9e-21
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		1e-20
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-20
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		1e-20
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		1e-20
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		1e-20
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-20
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		1e-20
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-20
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-20
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-20
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		1e-20
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		2e-20
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		2e-20
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		2e-20
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-20
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		3e-20
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-20
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		3e-20
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		3e-20
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		3e-20
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		4e-20
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		4e-20
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-20
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		1e-19
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		2e-19
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-19
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		2e-19
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		2e-19
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		2e-19
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		3e-19
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		3e-19
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		4e-19
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		4e-19
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		4e-19
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		5e-19
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		5e-19
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-19
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		6e-19
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		8e-19
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		8e-19
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		8e-19
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		9e-19
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		1e-18
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		3e-18
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		3e-18
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		4e-18
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-18
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		5e-18
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		7e-18
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		7e-18
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		8e-18
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		9e-18
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-17
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-17
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-17
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-17
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-17
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-17
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-17
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-17
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		2e-17
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		2e-17
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-17
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		3e-17
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		4e-17
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		4e-17
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		4e-17
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		6e-17
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		8e-17
2oza_A	356	Structure Of P38alpha Complex Length = 356		8e-17
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		9e-17
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		9e-17
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		1e-16
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		1e-16
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		1e-16
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		1e-16
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		1e-16
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		1e-16
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		2e-16
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		2e-16
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-16
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		2e-16
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		2e-16
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		2e-16
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-16
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		2e-16
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		2e-16
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		2e-16
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		2e-16
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		3e-16
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		3e-16
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		3e-16
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		3e-16
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		3e-16
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		3e-16
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		3e-16
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		5e-16
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		5e-16
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		5e-16
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		5e-16
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		6e-16
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		7e-16
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		1e-15
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		1e-15
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		1e-15
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-15
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		1e-15
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-15
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-15
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-15
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-15
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-15
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		1e-15
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-15
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-15
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		1e-15
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-15
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		1e-15
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-15
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		1e-15
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		2e-15
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		2e-15
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		2e-15
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		2e-15
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-15
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		2e-15
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		2e-15
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		2e-15
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		2e-15
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		2e-15
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		2e-15
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		2e-15
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		2e-15
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		2e-15
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		3e-15
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		3e-15
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		3e-15
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		3e-15
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		4e-15
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		4e-15
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		4e-15
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		5e-15
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		6e-15
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		6e-15
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		6e-15
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		6e-15
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		6e-15
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		6e-15
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		7e-15
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		8e-15
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		9e-15
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		1e-14
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		1e-14
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		1e-14
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		1e-14
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		1e-14
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		1e-14
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		1e-14
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-14
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		2e-14
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		2e-14
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		2e-14
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		4e-14
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		4e-14
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		5e-14
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		5e-14
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		5e-14
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		5e-14
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		5e-14
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		5e-14
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		6e-14
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		7e-14
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		8e-14
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		1e-13
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		1e-13
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		1e-13
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		1e-13
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-13
3g51_A	325	Structural Diversity Of The Active Conformation Of		2e-13
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		2e-13
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		2e-13
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		2e-13
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		2e-13
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		3e-13
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		3e-13
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		3e-13
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		3e-13
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		4e-13
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		4e-13
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		5e-13
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		6e-13
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		6e-13
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		6e-13
3a7f_A	303	Human Mst3 Kinase Length = 303		7e-13
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		7e-13
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		7e-13
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		7e-13
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		7e-13
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		8e-13
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		1e-12
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		1e-12
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		1e-12
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		1e-12
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		2e-12
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		2e-12
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		2e-12
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-12
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		2e-12
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		2e-12
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		3e-12
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		3e-12
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		3e-12
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		4e-12
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		4e-12
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		4e-12
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		5e-12
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		6e-12
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		6e-12
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		6e-12
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-12
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		6e-12
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-12
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		6e-12
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		6e-12
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-12
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		6e-12
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		6e-12
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		6e-12
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		6e-12
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		7e-12
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		7e-12
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		7e-12
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		7e-12
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		7e-12
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		8e-12
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		8e-12
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		8e-12
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-11
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-11
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-11
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		1e-11
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		2e-11
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		2e-11
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		2e-11
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		2e-11
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-11
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-11
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-11
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		2e-11
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-11
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		3e-11
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		3e-11
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		3e-11
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-11
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		3e-11
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		3e-11
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		3e-11
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		4e-11
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		4e-11
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		4e-11
4ae6_A	343	Structure And Function Of The Human Sperm-specific		4e-11
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		4e-11
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		4e-11
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		5e-11
4ae9_A	343	Structure And Function Of The Human Sperm-specific		5e-11
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		5e-11
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		5e-11
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		6e-11
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		6e-11
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		6e-11
3kk8_A	284	Camkii Substrate Complex A Length = 284		6e-11
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		6e-11
3kk9_A	282	Camkii Substrate Complex B Length = 282		6e-11
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		7e-11
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		8e-11
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		8e-11
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		8e-11
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		8e-11
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		8e-11
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		8e-11
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		8e-11
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		9e-11
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		9e-11
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		9e-11
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		9e-11
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-10
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		1e-10
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		1e-10
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		1e-10
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		1e-10
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		1e-10
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-10
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		1e-10
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		1e-10
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		1e-10
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		1e-10
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		1e-10
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		1e-10
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		1e-10
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		1e-10
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		1e-10
1qcf_A	454	Crystal Structure Of Hck In Complex With A Src Fami		1e-10
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		1e-10
4fie_A	423	Full-Length Human Pak4 Length = 423		1e-10
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		1e-10
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		2e-10
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		2e-10
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-10
2hk5_A	270	Hck Kinase In Complex With Lck Targetted Inhibitor		2e-10
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-10
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		2e-10
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		2e-10
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		2e-10
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		2e-10
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		2e-10
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		2e-10
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		2e-10
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-10
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		2e-10
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		2e-10
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		2e-10
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		2e-10
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		2e-10
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		2e-10
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-10
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		2e-10
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-10
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		2e-10
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		2e-10
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-10
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-10
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		3e-10
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		3e-10
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		3e-10
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		3e-10
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		3e-10
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		3e-10
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		3e-10
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		3e-10
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		3e-10
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		3e-10
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		3e-10
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		3e-10
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		3e-10
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		3e-10
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		3e-10
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		3e-10
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		3e-10
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		3e-10
1ad5_A	438	Src Family Kinase Hck-Amp-Pnp Complex Length = 438		3e-10
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		3e-10
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		4e-10
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		4e-10
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		4e-10
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		4e-10
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-10
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		4e-10
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		4e-10
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		4e-10
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		4e-10
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		4e-10
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		5e-10
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		5e-10
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		5e-10
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		5e-10
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		5e-10
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		5e-10
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		5e-10
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		6e-10
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		6e-10
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		6e-10
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		6e-10
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		6e-10
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		6e-10
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		6e-10
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		6e-10
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		7e-10
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		7e-10
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		7e-10
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		7e-10
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		7e-10
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		7e-10
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		7e-10
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		7e-10
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		7e-10
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		7e-10
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		7e-10
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		7e-10
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		7e-10
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		8e-10
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		9e-10
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		9e-10
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-09
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		1e-09
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		1e-09
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		1e-09
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-09
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		1e-09
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		1e-09
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		1e-09
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		1e-09
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		1e-09
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-09
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		1e-09
3soa_A	444	Full-Length Human Camkii Length = 444		1e-09
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		2e-09
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-09
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-09
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		2e-09
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		2e-09
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		2e-09
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		2e-09
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		3e-09
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		3e-09
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		3e-09
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		3e-09
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		4e-09
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		4e-09
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		4e-09
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		4e-09
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		4e-09
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		4e-09
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		5e-09
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		5e-09
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		5e-09
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		6e-09
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		7e-09
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		7e-09
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		8e-09
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		8e-09
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		8e-09
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		8e-09
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		8e-09
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		9e-09
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		9e-09
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		9e-09
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		9e-09
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		9e-09
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		1e-08
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-08
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		1e-08
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		1e-08
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		1e-08
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		1e-08
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		1e-08
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		1e-08
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		1e-08
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		1e-08
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-08
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		2e-08
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		2e-08
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-08
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		2e-08
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		2e-08
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		2e-08
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		2e-08
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-08
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		3e-08
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		3e-08
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		3e-08
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		3e-08
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-08
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		3e-08
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		3e-08
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		3e-08
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-08
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		3e-08
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		4e-08
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-08
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		4e-08
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		5e-08
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		5e-08
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		5e-08
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		5e-08
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		5e-08
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		5e-08
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		5e-08
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		6e-08
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		6e-08
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		6e-08
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		7e-08
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		8e-08
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		8e-08
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		8e-08
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		1e-07
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		1e-07
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-07
4g3g_A	350	Crystal Structure Of Murine Nf-kappab Inducing Kina		1e-07
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		1e-07
4g3c_A	352	Crystal Structure Of Apo Murine Nf-kappab Inducing		2e-07
2h8h_A	535	Src Kinase In Complex With A Quinazoline Inhibitor		2e-07
4g3f_A	336	Crystal Structure Of Murine Nf-kappab Inducing Kina		2e-07
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		2e-07
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		2e-07
1ckj_A	317	Casein Kinase I Delta Truncation Mutant Containing		3e-07
3uys_A	296	Crystal Structure Of Apo Human Ck1d Length = 296		3e-07
2dq7_X	283	Crystal Structure Of Fyn Kinase Domain Complexed Wi		3e-07
1yi6_A	276	C-Term Tail Segment Of Human Tyrosine Kinase (258-5		3e-07
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		3e-07
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		4e-07
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		4e-07
1y57_A	452	Structure Of Unphosphorylated C-Src In Complex With		4e-07
1fmk_A	452	Crystal Structure Of Human Tyrosine-Protein Kinase		4e-07
2bdf_A	279	Src Kinase In Complex With Inhibitor Ap23451 Length		5e-07
1ksw_A	452	Structure Of Human C-Src Tyrosine Kinase (Thr338gly		6e-07
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		6e-07
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		6e-07
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		6e-07
1yol_A	283	Crystal Structure Of Src Kinase Domain In Complex W		6e-07
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		6e-07
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-07
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		7e-07
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		8e-07
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		8e-07
4hgl_A	330	Crystal Structure Of Ck1g3 With Compound 1 Length =		8e-07
1yoj_A	283	Crystal Structure Of Src Kinase Domain Length = 283		8e-07
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		1e-06
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-06
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-06
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		1e-06
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		1e-06
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		1e-06
3kxz_A	287	The Complex Crystal Structure Of Lck With A Probe M		1e-06
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		1e-06
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-06
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-06
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		1e-06
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-06
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		1e-06
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		1e-06
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		2e-06
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		2e-06
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		2e-06
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		2e-06
2zm1_A	285	Crystal Structure Of Imidazo Pyrazin 1 Bound To The		2e-06
2pl0_A	289	Lck Bound To Imatinib Length = 289		2e-06
1qpe_A	279	Structural Analysis Of The Lymphocyte-Specific Kina		2e-06
3kmm_A	288	Structure Of Human Lck Kinase With A Small Molecule		2e-06
3a4o_X	286	Lyn Kinase Domain Length = 286		2e-06
2ofu_A	273	X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam		2e-06
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		2e-06
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		2e-06
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		2e-06
3bym_A	272	X-Ray Co-Crystal Structure Aminobenzimidazole Triaz		2e-06
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-06
3lck_A	271	The Kinase Domain Of Human Lymphocyte Kinase (Lck),		2e-06
3bys_A	277	Co-Crystal Structure Of Lck And Aminopyrimidine Ami		3e-06
2og8_A	265	Crystal Structure Of Aminoquinazoline 36 Bound To L		3e-06
2ofv_A	277	Crystal Structure Of Aminoquinazoline 1 Bound To Lc		3e-06
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-06
2of2_A	271	Crystal Structure Of Furanopyrimidine 8 Bound To Lc		3e-06
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		3e-06
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		4e-06
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		4e-06
2izr_A	330	Structure Of Casein Kinase Gamma 3 In Complex With		5e-06
2chl_A	351	Structure Of Casein Kinase 1 Gamma 3 Length = 351		5e-06
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		5e-06
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		6e-06
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		6e-06
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		6e-06
3mpm_A	267	Lck Complexed With A Pyrazolopyrimidine Length = 26		6e-06
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		7e-06
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		7e-06
2zv7_A	279	Lyn Tyrosine Kinase Domain, Apo Form Length = 279		8e-06
4hni_A	296	Crystal Structure Of Ck1e In Complex With Pf4800567		9e-06
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		1e-05
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		1e-05
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		2e-05
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		2e-05
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		2e-05
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		3e-05
1u54_A	291	Crystal Structures Of The Phosphorylated And Unphos		3e-05
1u46_A	291	Crystal Structure Of The Unphosphorylated Kinase Do		3e-05
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		4e-05
4ewh_B	275	Co-Crystal Structure Of Ack1 With Inhibitor Length		4e-05
4hge_A	300	Jak2 Kinase (Jh1 Domain) In Complex With Compound 8		4e-05
4hzr_A	277	Crystal Structure Of Ack1 Kinase Domain Length = 27		5e-05
4hzs_A	341	Crystal Structure Of Ack1 Kinase Domain With C-term		5e-05
3tjc_A	298	Co-Crystal Structure Of Jak2 With Thienopyridine 8		5e-05
4e4m_A	302	Jak2 Kinase (Jh1 Domain) In Complex With Compound 3		5e-05
3ugc_A	295	Structural Basis Of Jak2 Inhibition By The Type Ii		5e-05
4aqc_A	301	Triazolopyridine-Based Inhibitor Of Janus Kinase 2		5e-05
2w1i_A	326	Structure Determination Of Aurora Kinase In Complex		5e-05
3io7_A	313	2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel		5e-05
3jy9_A	311	Janus Kinase 2 Inhibitors Length = 311		5e-05
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		5e-05
3e62_A	293	Fragment Based Discovery Of Jak-2 Inhibitors Length		5e-05
4id7_A	273	Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-		6e-05
3q32_A	301	Structure Of Janus Kinase 2 With A Pyrrolotriazine		6e-05
3eqp_B	276	Crystal Structure Of Ack1 With Compound T95 Length		6e-05
3rvg_A	303	Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido		6e-05
3lpb_A	295	Crystal Structure Of Jak2 Complexed With A Potent 2		6e-05
3k54_A	283	Structures Of Human Bruton's Tyrosine Kinase In Act		6e-05
3lco_A	324	Inhibitor Bound To A Dfg-Out Structure Of The Kinas		6e-05
2b7a_A	293	The Structural Basis Of Janus Kinase 2 Inhibition B		6e-05
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		7e-05
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		8e-05
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		8e-05
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		8e-05
3c7q_A	316	Structure Of Vegfr2 Kinase Domain In Complex With B		8e-05
1qpd_A	279	Structural Analysis Of The Lymphocyte-specific Kina		8e-05
3gen_A	283	The 1.6 A Crystal Structure Of Human Bruton's Tyros		9e-05
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		9e-05
1x8b_A	289	Structure Of Human Wee1a Kinase: Kinase Domain Comp		1e-04
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-04
4agc_A	353	Crystal Structure Of Vegfr2 (Juxtamembrane And Kina		1e-04
3bi6_A	287	Wee1 Kinase Complex With Inhibitor Pd352396 Length		1e-04
2in6_A	287	Wee1 Kinase Complex With Inhibitor Pd311839 Length		1e-04
2z2w_A	285	Humand Wee1 Kinase Complexed With Inhibitor Pf03357		1e-04
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		1e-04
3pix_A	274	Crystal Structure Of Btk Kinase Domain Complexed Wi		1e-04
3vnt_A	318	Crystal Structure Of The Kinase Domain Of Human Veg		1e-04
3d7t_A	269	Structural Basis For The Recognition Of C-Src By It		1e-04
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		1e-04
1k2p_A	263	Crystal Structure Of Bruton's Tyrosine Kinase Domai		2e-04
4e4l_A	302	Jak1 Kinase (Jh1 Domain) In Complex With Compound 3		2e-04
3ocs_A	271	Crystal Structure Of Bruton's Tyrosine Kinase In Co		2e-04
2xir_A	316	Crystal Structure Of The Vegfr2 Kinase Domain In Co		2e-04
3p08_A	267	Crystal Structure Of The Human Btk Kinase Domain Le		2e-04
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-04
4bbe_A	298	Aminoalkylpyrimidine Inhibitor Complexes With Jak2		2e-04
3eyg_A	290	Crystal Structures Of Jak1 And Jak2 Inhibitor Compl		2e-04
4e6d_A	298	Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W		2e-04
3lcd_A	329	Inhibitor Bound To A Dfg-In Structure Of The Kinase		2e-04
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		2e-04
2ogv_A	317	Crystal Structure Of The Autoinhibited Human C-Fms		2e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		2e-04
3ewh_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
2p2i_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
3u6j_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		3e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		4e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		4e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		4e-04
1ywn_A	316	Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p		4e-04
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		5e-04
1vr2_A	316	Human Vascular Endothelial Growth Factor Receptor 2		5e-04
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		5e-04
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		6e-04
2xa4_A	298	Inhibitors Of Jak2 Kinase Domain Length = 298		6e-04
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		6e-04
2p2h_A	314	Crystal Structure Of The Vegfr2 Kinase Domain In Co		7e-04
3cjg_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		7e-04
3oct_A	265	Crystal Structure Of Bruton's Tyrosine Kinase Mutan		7e-04

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score =  339 bits (869), Expect = 2e-93,   Method: Compositional matrix adjust.
 Identities = 170/354 (48%), Positives = 240/354 (67%), Gaps = 20/354 (5%)
Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVRSIRKYRD 107
           +DD EGH ++++G+ L  RY+I+S +GEGTFGRV++C D R+   RVA+K+++++ KY++
Sbjct: 16  EDDAEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKE 75
Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           AA +EI+VL+ + + D    + CVQ+ +WFDY  H+CI FE LG S FDFLK N Y P+P
Sbjct: 76  AARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYP 135
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           +  VR    QL ++V ++HD +L HTDLKPENIL V+S++      ++            
Sbjct: 136 IHQVRHMAFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSV----- 190
Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           KS+A++++DFGS  FD+++HS+IVSTRHYRAPEVIL LGWS PCD+WS+GCI+ E   G 
Sbjct: 191 KSTAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGF 250
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESI 343
            LFQTH+N EHLAMMER LGP+P  MIR+  +  +KYF RG RL+W E    G   RE+ 
Sbjct: 251 TLFQTHDNREHLAMMERILGPIPSRMIRKTRK--QKYFYRG-RLDWDENTSAGRYVRENC 307
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           K +++   L +    H       L DL+  +L Y+P++RLT  +AL HPFF  L
Sbjct: 308 KPLRRY--LTSEAEEH-----HQLFDLIESMLEYEPAKRLTLGEALQHPFFARL 354

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score =  315 bits (808), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 159/355 (44%), Positives = 234/355 (65%), Gaps = 20/355 (5%)
Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRKYRD 107
           +DD+EGH V  +G+ L  RY+I+  +GEGTFG+V+EC D  + + +VA+K++R++ KYR+
Sbjct: 34  EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 93
Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           AA +EI+VL+ + + DK     CV + +WF++  H+CI FE LG + F+FLK N + P+P
Sbjct: 94  AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 153
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           +  VR    QL  ++ ++H+ +L HTDLKPENIL V+SEF  L    +S   +       
Sbjct: 154 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV----- 208
Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           K+++I++ DFGS  FD+++H++IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E   G 
Sbjct: 209 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 268
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESI 343
            LFQTHEN EHL MME+ LGP+P HMI R  +  +KYF +G  L W E    G   +E+ 
Sbjct: 269 TLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGG-LVWDENSSDGRYVKENC 325
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
           K +K       M+   ++  +  L DL+  +L +DP++R+T  +AL HPFF  L 
Sbjct: 326 KPLKSY-----MLQDSLEHVQ--LFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 373

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score =  315 bits (807), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 159/355 (44%), Positives = 230/355 (64%), Gaps = 20/355 (5%)
Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRKYRD 107
           +DD+EGH V  +G+ L  RY+I+  +GEGTFG+V+EC D  + + +VA+K++R++ KYR+
Sbjct: 11  EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 70
Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           AA +EI+VL+ + + DK     CV + +WF++  H+CI FE LG + F+FLK N + P+P
Sbjct: 71  AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 130
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           +  VR    QL  ++ ++H+ +L HTDLKPENIL V+SEF  L    +S   +       
Sbjct: 131 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV----- 185
Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           K+++I++ DFGS  FD+++H++IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E   G 
Sbjct: 186 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 245
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESI 343
            LFQTHEN EHL MME+ LGP+P HMI R  +  +KYF +G  L W E    G   +E+ 
Sbjct: 246 TLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGG-LVWDENSSDGRYVKENC 302
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
           K +K          L        L DL+  +L +DP++R+T  +AL HPFF  L 
Sbjct: 303 KPLKS-------YMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLT 350

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score =  315 bits (807), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 159/354 (44%), Positives = 230/354 (64%), Gaps = 20/354 (5%)
Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRKYRD 107
           +DD+EGH V  +G+ L  RY+I+  +GEGTFG+V+EC D  + + +VA+K++R++ KYR+
Sbjct: 2   EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 61
Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           AA +EI+VL+ + + DK     CV + +WF++  H+CI FE LG + F+FLK N + P+P
Sbjct: 62  AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 121
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           +  VR    QL  ++ ++H+ +L HTDLKPENIL V+SEF  L    +S   +       
Sbjct: 122 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSV----- 176
Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           K+++I++ DFGS  FD+++H++IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E   G 
Sbjct: 177 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 236
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE----GAVSRESI 343
            LFQTHEN EHL MME+ LGP+P HMI R  +  +KYF +G  L W E    G   +E+ 
Sbjct: 237 TLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKGG-LVWDENSSDGRYVKENC 293
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           K +K          L        L DL+  +L +DP++R+T  +AL HPFF  L
Sbjct: 294 KPLKS-------YMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score =  313 bits (802), Expect = 1e-85,   Method: Compositional matrix adjust.
 Identities = 160/344 (46%), Positives = 226/344 (65%), Gaps = 18/344 (5%)
Query: 55  HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRDAAMIEI 113
           H +   G+ L+ RY+I+  +GEG FG+V+EC D +   R VA+K+V+++ +Y +AA  EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 114 DVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
            VL+HL   D   +  CVQ+  WF++  HICIVFE LG S +DF+K N + PF +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--PGYKRSSSGEMPFRCLPKSSA 231
              Q+ +SV ++H  +L HTDLKPENIL V S++ +   P  KR     +       +  
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI-------NPD 175
Query: 232 IKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
           IK++DFGS  +D+++HS++VSTRHYRAPEVIL LGWS PCD+WS+GCIL+E   G  +F 
Sbjct: 176 IKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP 235
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE-GAVSRESIKAVKKLD 350
           TH++ EHLAMMER LGPLP+HMI++  +   KYF    RL+W E  +  R   +A K L 
Sbjct: 236 THDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHH-DRLDWDEHSSAGRYVSRACKPLK 292
Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
               M+S  V+  R  L DL+  +L YDP++R+T R+AL HPFF
Sbjct: 293 EF--MLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score =  309 bits (792), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 158/344 (45%), Positives = 224/344 (65%), Gaps = 18/344 (5%)
Query: 55  HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRDAAMIEI 113
           H +   G+ L+ RY+I+  +GEG FG+V+EC D +   R VA+K+V+++ +Y +AA  EI
Sbjct: 3   HLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEI 62
Query: 114 DVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
            VL+HL   D   +  CVQ+  WF++  HICIVFE LG S +DF+K N + PF +D +R+
Sbjct: 63  QVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRK 122
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--PGYKRSSSGEMPFRCLPKSSA 231
              Q+ +SV ++H  +L HTDLKPENIL V S++ +   P  KR     +       +  
Sbjct: 123 MAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLI-------NPD 175
Query: 232 IKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
           IK++DFGS  +D+++HS++V  RHYRAPEVIL LGWS PCD+WS+GCIL+E   G  +F 
Sbjct: 176 IKVVDFGSATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFP 235
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE-GAVSRESIKAVKKLD 350
           TH++ EHLAMMER LGPLP+HMI++  +   KYF    RL+W E  +  R   +A K L 
Sbjct: 236 THDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHH-DRLDWDEHSSAGRYVSRACKPLK 292
Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
               M+S  V+  R  L DL+  +L YDP++R+T R+AL HPFF
Sbjct: 293 EF--MLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFF 332

>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain Length = 360

Iteration: 1
 Score =  258 bits (659), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 143/348 (41%), Positives = 210/348 (60%), Gaps = 10/348 (2%)
Query: 50  DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA 109
           DD   H+ +  G  L   + ++ KMG+GTFGRVL C     ++  A+KVVR+I+KY  +A
Sbjct: 19  DDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSA 78
Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
            IE D+L+ + +ND   +++ V+    F Y +H+C++FE LGPSL++ + RN Y  F ++
Sbjct: 79  KIEADILKKI-QNDDINNNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIE 137
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK-LPGYKRSSSGEMPFRCLPK 228
            ++ +  ++L+++ Y+  + L HTDLKPENILL    F K L   +R + G+       K
Sbjct: 138 DIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTK 197
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA 288
           S+ IKLIDFG   F +  H SI++TR YRAPEVIL LGW    DMWS GC+L EL TG  
Sbjct: 198 STGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSL 257
Query: 289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGT-EKYFRRGS-RLNWPEGAVSRESIKAV 346
           LF+THE++EHLAMME  + P+P++M+  A++    KY  +   +L WPE A S  SIK V
Sbjct: 258 LFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHV 317
Query: 347 KKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           KK   L  ++            D L+ +L+ DP+ R +  + L H F 
Sbjct: 318 KKCLPLYKIIK------HELFCDFLYSILQIDPTLRPSPAELLKHKFL 359

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score =  204 bits (519), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 189/372 (50%), Gaps = 65/372 (17%)
Query: 50  DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA 109
           DD +G YV    +++  RY++L  +G+G+FG+V++ +D +  + VA+K+VR+ +++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
             EI +L+HL K DK  + + + +   F +RNHIC+ FE L  +L++ +K+NK+  F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
           LVR+F   +L+ +  +H  R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ----------------------GR 238
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
           S IK+IDFGS+ +++Q   + + +R YRAPEVILG  +  P DMWS+GCIL EL TG  L
Sbjct: 239 SGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298
Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYF------------------------ 325
               +  + LA M   LG +P   +  AS+  + +                         
Sbjct: 299 LPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGG 357
Query: 326 --RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL 383
             RRG     PE   SRE   A+K  D                  D L   L +DP+ R+
Sbjct: 358 RSRRGKLRGPPE---SREWGNALKGCD-------------DPLFLDFLKQCLEWDPAVRM 401
Query: 384 TARQALNHPFFR 395
           T  QAL HP+ R
Sbjct: 402 TPGQALRHPWLR 413

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score =  204 bits (519), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 189/372 (50%), Gaps = 65/372 (17%)
Query: 50  DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA 109
           DD +G YV    +++  RY++L  +G+G+FG+V++ +D +  + VA+K+VR+ +++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
             EI +L+HL K DK  + + + +   F +RNHIC+ FE L  +L++ +K+NK+  F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
           LVR+F   +L+ +  +H  R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ----------------------GR 238
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
           S IK+IDFGS+ +++Q   + + +R YRAPEVILG  +  P DMWS+GCIL EL TG  L
Sbjct: 239 SGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298
Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYF------------------------ 325
               +  + LA M   LG +P   +  AS+  + +                         
Sbjct: 299 LPGEDEGDQLACMIELLG-MPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGG 357
Query: 326 --RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL 383
             RRG     PE   SRE   A+K  D                  D L   L +DP+ R+
Sbjct: 358 RSRRGKLRGPPE---SREWGNALKGCD-------------DPLFLDFLKQCLEWDPAVRM 401
Query: 384 TARQALNHPFFR 395
           T  QAL HP+ R
Sbjct: 402 TPGQALRHPWLR 413

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/372 (33%), Positives = 187/372 (50%), Gaps = 65/372 (17%)
Query: 50  DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA 109
           DD +G YV    +++  RY++L  +G+G FG+V++ +D +  + VA+K+VR+ +++   A
Sbjct: 81  DDDQGSYVQVPHDHVAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQA 140
Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
             EI +L+HL K DK  + + + +   F +RNHIC+ FE L  +L++ +K+NK+  F + 
Sbjct: 141 AEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLP 200
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
           LVR+F   +L+ +  +H  R+IH DLKPENILL                           
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQ----------------------GR 238
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
           S IK+IDFGS+ +++Q     + +R YRAPEVILG  +  P DMWS+GCIL EL TG  L
Sbjct: 239 SGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPL 298
Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYF------------------------ 325
               +  + LA M   LG +P   +  AS+  + +                         
Sbjct: 299 LPGEDEGDQLACMIELLG-MPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLNGG 357
Query: 326 --RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL 383
             RRG     PE   SRE   A+K  D                  D L   L +DP+ R+
Sbjct: 358 RSRRGKLRGPPE---SREWGNALKGCD-------------DPLFLDFLKQCLEWDPAVRM 401
Query: 384 TARQALNHPFFR 395
           T  QAL HP+ R
Sbjct: 402 TPGQALRHPWLR 413

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score =  196 bits (498), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 189/357 (52%), Gaps = 50/357 (14%)
Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
           GE    RY+I S +G+G+FG+V++ +DR  QE VAIK++++ + + + A IE+ +L+ + 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           K+D     + V ++  F +RNH+C+VFE L  +L+D L+   +    ++L R+F +Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 181 SVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           ++ ++   +L +IH DLKPENILL                      C PK SAIK++DFG
Sbjct: 169 ALLFLATPELSIIHCDLKPENILL----------------------CNPKRSAIKIVDFG 206
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
           S+    Q     + +R YR+PEV+LG+ +    DMWS+GCILVE+ TGE LF     ++ 
Sbjct: 207 SSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQ 266
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK------LDRL 352
           +  +   LG  P H++ +A +   K+F +      P+G  + +  K  K+        +L
Sbjct: 267 MNKIVEVLGIPPAHILDQAPKA-RKFFEK-----LPDGTWNLKKTKDGKREYKPPGTRKL 320
Query: 353 KNMVSL--------------HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
            N++ +              H         DL+  +L YDP  R+    AL H FF+
Sbjct: 321 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score =  196 bits (497), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 115/357 (32%), Positives = 189/357 (52%), Gaps = 50/357 (14%)
Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
           GE    RY+I S +G+G+FG+V++ +DR  QE VAIK++++ + + + A IE+ +L+ + 
Sbjct: 30  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 89
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           K+D     + V ++  F +RNH+C+VFE L  +L+D L+   +    ++L R+F +Q+  
Sbjct: 90  KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 149
Query: 181 SVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           ++ ++   +L +IH DLKPENILL                      C PK SAIK++DFG
Sbjct: 150 ALLFLATPELSIIHCDLKPENILL----------------------CNPKRSAIKIVDFG 187
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
           S+    Q     + +R YR+PEV+LG+ +    DMWS+GCILVE+ TGE LF     ++ 
Sbjct: 188 SSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQ 247
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK------LDRL 352
           +  +   LG  P H++ +A +   K+F +      P+G  + +  K  K+        +L
Sbjct: 248 MNKIVEVLGIPPAHILDQAPKA-RKFFEK-----LPDGTWNLKKTKDGKREYKPPGTRKL 301
Query: 353 KNMVSL--------------HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
            N++ +              H         DL+  +L YDP  R+    AL H FF+
Sbjct: 302 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 358

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score =  194 bits (492), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 114/357 (31%), Positives = 188/357 (52%), Gaps = 50/357 (14%)
Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
           GE    RY+I S +G+G+FG+V++ +DR  QE VAIK++++ + + + A IE+ +L+ + 
Sbjct: 49  GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMN 108
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           K+D     + V ++  F +RNH+C+VFE L  +L+D L+   +    ++L R+F +Q+  
Sbjct: 109 KHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCT 168
Query: 181 SVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           ++ ++   +L +IH DLKPENILL                      C PK  AIK++DFG
Sbjct: 169 ALLFLATPELSIIHCDLKPENILL----------------------CNPKRXAIKIVDFG 206
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
           S+    Q     + +R YR+PEV+LG+ +    DMWS+GCILVE+ TGE LF     ++ 
Sbjct: 207 SSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQ 266
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK------LDRL 352
           +  +   LG  P H++ +A +   K+F +      P+G  + +  K  K+        +L
Sbjct: 267 MNKIVEVLGIPPAHILDQAPKA-RKFFEK-----LPDGTWNLKKTKDGKREYKPPGTRKL 320
Query: 353 KNMVSL--------------HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
            N++ +              H         DL+  +L YDP  R+    AL H FF+
Sbjct: 321 HNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFK 377

>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific Kinase 2 (Srpk2) Bound To Purvalanol B Length = 389

Iteration: 1
 Score =  160 bits (406), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 188/382 (49%), Gaps = 46/382 (12%)
Query: 52  REGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI 111
           + G++   +G+    RY ++ K+G G F  V  CWD Q +  VA+KVV+S + Y + A+ 
Sbjct: 17  KGGYHPVKIGDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALD 76
Query: 112 EIDVLQHLAKNDKGGSSHCVQIRNWFDYR------NHICIVFEKLGPSLFDFLKRNKYCP 165
           EI +L+ + ++D    +  + ++   D++       H+C+VFE LG  L  ++ ++ Y  
Sbjct: 77  EIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQG 136
Query: 166 FPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILL-VSSEFIK-------------L 210
            PV  V+   RQ+L+ + Y+H   ++IHTD+KPENIL+ V   +++              
Sbjct: 137 LPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGA 196
Query: 211 PGYKRSSSGEMPFRCL------PKSSA---IKLIDFGSTAFDNQNHSSIVSTRHYRAPEV 261
           P    S+    P   L      P+++    +K+ D G+  + +++ +  + TR YR+ EV
Sbjct: 197 PPPSGSAVSTAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEV 256
Query: 262 ILGLGWSYPCDMWSVGCILVELCTGEALFQTHE------NLEHLAMMERALGPLPEHMIR 315
           ++G G+S P D+WS  C+  EL TG+ LF+ H       + +H+A +   LG +P H   
Sbjct: 257 LIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
Query: 316 RASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL-HVDRARSTLTDLLHGL 374
                 E + RRG   +          +K     D L       H D A+   TD L  +
Sbjct: 317 SGKYSREFFNRRGELRH-------ITKLKPWSLFDVLVEKYGWPHEDAAQ--FTDFLIPM 367
Query: 375 LRYDPSERLTARQALNHPFFRN 396
           L   P +R +A + L HP+  +
Sbjct: 368 LEMVPEKRASAGECLRHPWLNS 389

>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide Length = 397

Iteration: 1
 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 198/396 (50%), Gaps = 58/396 (14%)
Query: 49  DDDRE--------GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR 100
           DD++E        G+++  +G+    RY ++ K+G G F  V   WD Q ++ VA+KVV+
Sbjct: 12  DDEQEDPNDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVK 71
Query: 101 SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR------NHICIVFEKLGPSL 154
           S   Y + A+ EI +L+ +  +D    +  + ++   D++       HIC+VFE LG  L
Sbjct: 72  SAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHL 131
Query: 155 FDFLKRNKYCPFPVDLVREFGRQLLESVAYMH-DLRLIHTDLKPENILL-VSSEFIK--- 209
             ++ ++ Y   P+  V++  +Q+L+ + Y+H   R+IHTD+KPENILL V+ ++I+   
Sbjct: 132 LKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLA 191
Query: 210 --LPGYKRS---------------SSGEMPFRCL-PKSS---AIKLIDFGSTAFDNQNHS 248
                ++RS               ++G      L PK++    +K+ D G+  + +++ +
Sbjct: 192 AEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFT 251
Query: 249 SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE------HLAMM 302
             + TR YR+ EV++G G++ P D+WS  C+  EL TG+ LF+ H   E      H+A++
Sbjct: 252 EDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALI 311
Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH--V 360
              LG +P  +I       E + ++G            + I  +K     + +V  +   
Sbjct: 312 IELLGKVPRKLIVAGKYSKEFFTKKG----------DLKHITKLKPWGLFEVLVEKYEWS 361
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
               +  TD L  +L   P +R TA + L HP+  +
Sbjct: 362 QEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS 397

>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its Substrate AsfSF2 Length = 381

Iteration: 1
 Score =  160 bits (405), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 195/388 (50%), Gaps = 50/388 (12%)
Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA 108
           D  + G+++  +G+    RY ++ K+G G F  V   WD Q ++ VA+KVV+S   Y + 
Sbjct: 4   DYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTET 63
Query: 109 AMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR------NHICIVFEKLGPSLFDFLKRNK 162
           A+ EI +L+ +  +D    +  + ++   D++       HIC+VFE LG  L  ++ ++ 
Sbjct: 64  ALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSN 123
Query: 163 YCPFPVDLVREFGRQLLESVAYMH-DLRLIHTDLKPENILL-VSSEFIK-----LPGYKR 215
           Y   P+  V++  +Q+L+ + Y+H   R+IHTD+KPENILL V+ ++I+        ++R
Sbjct: 124 YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQR 183
Query: 216 S---------------SSGEMPFRCL-PKSS---AIKLIDFGSTAFDNQNHSSIVSTRHY 256
           S               ++G      L PK++    +K+ D G+  + +++ +  + TR Y
Sbjct: 184 SGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQY 243
Query: 257 RAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE------HLAMMERALGPLP 310
           R+ EV++G G++ P D+WS  C+  EL TG+ LF+ H   E      H+A++   LG +P
Sbjct: 244 RSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVP 303
Query: 311 EHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH--VDRARSTLT 368
             +I       E + ++G            + I  +K     + +V  +       +  T
Sbjct: 304 RKLIVAGKYSKEFFTKKG----------DLKHITKLKPWGLFEVLVEKYEWSQEEAAGFT 353
Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRN 396
           D L  +L   P +R TA + L HP+  +
Sbjct: 354 DFLLPMLELIPEKRATAAECLRHPWLNS 381

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 177/352 (50%), Gaps = 54/352 (15%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-----AK 121
           RY ++ K+G G F  V    D      VA+K+VR  + Y +AA  EI +LQ +      K
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 122 NDKGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
            D  G++H +++ + F+++     H+ +VFE LG +L   +K+ ++   P+  V++  +Q
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 178 LLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           LL  + YMH    +IHTD+KPEN+L+   E +  P                    IK+ D
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSP---------------ENLIQIKIAD 181
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE-- 294
            G+  + ++++++ + TR YR+PEV+LG  W    D+WS  C++ EL TG+ LF+  E  
Sbjct: 182 LGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
Query: 295 ----NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRG-----SRLN-WPEGAVSRESIK 344
               + +H+A +   LG LP +++R        +  RG     S+L  WP   V  E  K
Sbjct: 242 SYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK 301
Query: 345 AVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
             K             D A+  ++D L  +L+ DP +R  A   +NHP+ ++
Sbjct: 302 FSK-------------DEAKE-ISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score =  157 bits (396), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/352 (30%), Positives = 177/352 (50%), Gaps = 54/352 (15%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-----AK 121
           RY ++ K+G G F  V    D      VA+K+VR  + Y +AA  EI +LQ +      K
Sbjct: 20  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 122 NDKGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
            D  G++H +++ + F+++     H+ +VFE LG +L   +K+ ++   P+  V++  +Q
Sbjct: 80  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 139
Query: 178 LLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           LL  + YMH    +IHTD+KPEN+L+   E +  P                    IK+ D
Sbjct: 140 LLLGLDYMHRRCGIIHTDIKPENVLM---EIVDSP---------------ENLIQIKIAD 181
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE-- 294
            G+  + ++++++ + TR YR+PEV+LG  W    D+WS  C++ EL TG+ LF+  E  
Sbjct: 182 LGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 241
Query: 295 ----NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRG-----SRLN-WPEGAVSRESIK 344
               + +H+A +   LG LP +++R        +  RG     S+L  WP   V  E  K
Sbjct: 242 SYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYK 301
Query: 345 AVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
             K             D A+  ++D L  +L+ DP +R  A   +NHP+ ++
Sbjct: 302 FSK-------------DEAKE-ISDFLSPMLQLDPRKRADAGGLVNHPWLKD 339

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score =  131 bits (330), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L DF+  +     P+ L++ +  QLL+ +A+
Sbjct: 60  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKPEN LL+++E                        AIKL DFG + AF 
Sbjct: 119 CHSHRVLHRDLKPEN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 169/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 61
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L DF+  +     P+ L++ +  QLL+ +A+
Sbjct: 62  -NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 121 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 156
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 217 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 259
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 260 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 294

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 163/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L DF+  +     P+ L++ +  QLL+ +A+
Sbjct: 63  -NHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
            H  R++H DLKP+N LL+++E                        AIKL DFG   +  
Sbjct: 122 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 66
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 67  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 126 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 161
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 162 VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 222 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 264
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 265 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 299

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 63  -NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKPEN LL+++E                        AIKL DFG + AF 
Sbjct: 122 CHSHRVLHRDLKPEN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  129 bits (325), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 60
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 61  -NHPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKPEN LL+++E                        AIKL DFG + AF 
Sbjct: 120 CHSHRVLHRDLKPEN-LLINTE-----------------------GAIKLADFGLARAFG 155
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 216 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 258
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 259 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 293

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 61
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 62  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKPEN LL+++E                        AIKL DFG + AF 
Sbjct: 121 CHSHRVLHRDLKPEN-LLINTE-----------------------GAIKLADFGLARAFG 156
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 217 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 259
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 260 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 294

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 60  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 60
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 61  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKPEN LL+++E                        AIKL DFG + AF 
Sbjct: 120 CHSHRVLHRDLKPEN-LLINTE-----------------------GAIKLADFGLARAFG 155
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 216 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 258
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 259 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 293

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score =  129 bits (323), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 63
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 64  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 123 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 158
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 159 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 219 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 261
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 262 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 296

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 60
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 61  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 120 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 155
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 156 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 216 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 258
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 259 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 293

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 167/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 12  FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 66
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 67  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 125
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
            H  R++H DLKP+N LL+++E                        AIKL DFG   +  
Sbjct: 126 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 161
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 162 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 221
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 222 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 264
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 265 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 299

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 169/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 60  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score =  128 bits (322), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 60  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score =  128 bits (322), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 59  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score =  128 bits (322), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 59  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  128 bits (321), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE +   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 59  -NHPNIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score =  128 bits (321), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 63  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 122 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score =  128 bits (321), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 61
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 62  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 121 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 156
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 217 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 259
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 260 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 294

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  128 bits (321), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/339 (29%), Positives = 166/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 63  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
            H  R++H DLKP+N LL+++E                        AIKL DFG   +  
Sbjct: 122 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score =  128 bits (321), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 7   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 61
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 62  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 121 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 156
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 157 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 216
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 217 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 259
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 260 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 294

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score =  128 bits (321), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 63  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 122 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score =  128 bits (321), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 9   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 63
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 64  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 123 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 158
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 159 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 218
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 219 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 261
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 262 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 296

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score =  128 bits (321), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 60  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score =  127 bits (320), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 60
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 61  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 120 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 155
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 216 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 258
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 259 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 293

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score =  127 bits (320), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 162/339 (47%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 60  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
            H  R++H DLKP+N LL+++E                        AIKL DFG   +  
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score =  127 bits (320), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 59  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 154 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score =  127 bits (320), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 8   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 62
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE +   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 63  -NHPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 122 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 157
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 158 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 217
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 218 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 260
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 261 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 295

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score =  127 bits (320), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 60  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score =  127 bits (320), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 168/339 (49%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 6   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 60
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 61  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 120 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 155
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 156 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 215
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y     + ++P+ A  ++  K V  LD          
Sbjct: 216 RIFRTLG-TPDEVVWPGVTSMPDY-----KPSFPKWA-RQDFSKVVPPLD---------- 258
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 259 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 293

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score =  127 bits (320), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 102/339 (30%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 59  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 154 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 165/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +++
Sbjct: 60  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 162/336 (48%), Gaps = 58/336 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L     
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 60  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + +   V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 155 VPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
           +  RS L+ +LH    YDP++R++A+ AL HPFF++
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQD 289

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+  +R           A+ EI +L+ L     
Sbjct: 5   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL----- 59
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 60  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 119 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 154
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 155 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 214
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 215 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 257
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 258 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 292

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/339 (29%), Positives = 164/339 (48%), Gaps = 58/339 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++ + K+GEGT+G V +  ++ T E VA+  +R           A+ EI +L+ L     
Sbjct: 4   FQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL----- 58
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A+
Sbjct: 59  -NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
            H  R++H DLKP+N LL+++E                        AIKL DFG + AF 
Sbjct: 118 CHSHRVLHRDLKPQN-LLINTE-----------------------GAIKLADFGLARAFG 153
Query: 244 --NQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L 
Sbjct: 154 VPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLF 213
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG  P+ ++         Y  + S   W     S    K V  LD          
Sbjct: 214 RIFRTLG-TPDEVVWPGVTSMPDY--KPSFPKWARQDFS----KVVPPLD---------- 256
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  RS L+ +LH    YDP++R++A+ AL HPFF+++ +
Sbjct: 257 EDGRSLLSQMLH----YDPNKRISAKAALAHPFFQDVTK 291

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score =  120 bits (302), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 156/343 (45%), Gaps = 63/343 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +Y+ + K+GEG++G V +C +R T + VAIK      +  D  +I+   L+ +    +  
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIK---KFLESEDDPVIKKIALREIRMLKQLK 60
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
             + V +   F  +  + +VFE    ++   L R +    P  LV+    Q L++V + H
Sbjct: 61  HPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG-VPEHLVKSITWQTLQAVNFCH 119
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-------- 238
               IH D+KPENIL+                         K S IKL DFG        
Sbjct: 120 KHNCIHRDVKPENILIT------------------------KHSVIKLCDFGFARLLTGP 155
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
           S  +D++     V+TR YR+PE+++G   +  P D+W++GC+  EL +G  L+    +++
Sbjct: 156 SDYYDDE-----VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD 210
Query: 298 HLAMMERALGPL-PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
            L ++ + LG L P H   +    T +YF  G ++  PE     E               
Sbjct: 211 QLYLIRKTLGDLIPRH---QQVFSTNQYFS-GVKIPDPEDMEPLE--------------- 251
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
            L           LL G L  DP+ERLT  Q L+HP+F N+ E
Sbjct: 252 -LKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 156/337 (46%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + + S +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDSELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LCRHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 156/337 (46%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 79
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 80  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 136
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + + S +K++DFG
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDSELKILDFG 172
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 233 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 274
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 275 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score =  117 bits (294), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 156/337 (46%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 84  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + + S +K++DFG
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDSELKILDFG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 237 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 278
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 279 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  117 bits (294), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDXELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score =  117 bits (292), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 96
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 97  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 153
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 189
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 250 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 291
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 292 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score =  117 bits (292), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 73
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 74  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 166
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 167 LARHTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 227 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 268
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 269 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 97
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 98  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 154
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 190
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 251 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 292
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 293 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 73
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 74  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 166
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 227 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 268
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 269 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 88
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 89  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 145
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDXELKILDFG 181
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 242 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 283
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 284 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 28  RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 82
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 83  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDXELKILDFG 175
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 236 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 277
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 278 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 84  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 237 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 278
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 279 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score =  116 bits (290), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 73
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 74  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTD---DHVQFLIYQI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 166
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 227 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 268
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 269 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 82
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 83  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDXELKILDFG 175
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 236 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 277
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 278 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYR-----ELRLLKH 89
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 90  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 146
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 243 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 284
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 285 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 89
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 90  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 146
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 243 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 284
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 285 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 35  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 89
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 90  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 146
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 147 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 183 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 242
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 243 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 284
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 285 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 320

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 97
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 98  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 154
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 190
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +      V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 191 LARHTDDEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 251 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 292
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 293 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 43  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 97
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 98  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 154
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 155 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 190
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 191 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 250
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 251 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 292
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 293 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 328

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 34  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 88
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 89  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 145
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 146 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 181
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 182 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 241
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 242 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 283
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 284 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 319

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 84  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 237 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 278
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 279 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 21  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 75
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 76  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 132
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 133 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 168
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 169 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 228
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 229 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 270
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 271 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 306

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 79
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 80  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 136
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 172
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 233 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 274
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 275 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 100
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 101 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 157
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 193
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 194 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 254 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 295
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 296 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 84
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 85  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 178 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 238 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 279
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 280 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 42  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 96
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 97  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 153
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 154 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 189
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 190 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 249
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 250 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 291
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 292 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 327

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 74
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 75  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 131
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 167
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 228 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 269
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 270 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 79
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 80  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 136
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 172
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 233 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 274
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 275 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 19  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 73
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 74  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 131 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 166
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 167 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 226
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 227 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 268
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 269 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 304

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 25  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 79
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 80  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 136
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 137 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 172
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 173 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 232
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 233 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 274
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 275 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 310

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score =  115 bits (289), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 82
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 83  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 175
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 236 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 277
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 278 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ L+ +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 33  RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 87
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 88  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 144
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 145 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 180
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 181 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 240
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 241 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLAQMPKM-NFAN 282
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 283 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 318

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 22  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 76
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 77  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 133
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 134 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 169
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 170 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 229
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 230 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 271
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 272 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 307

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 20  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 74
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 75  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 131
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 132 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 167
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 168 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 227
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 228 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 269
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 270 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 305

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 28  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 82
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 83  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 140 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 175
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 176 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 235
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 236 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 277
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 278 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 313

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score =  115 bits (288), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 29  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 84  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 141 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 177 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 236
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 237 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 278
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 279 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 314

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 46  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 100
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 101 MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 157
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 158 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 193
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +      V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 194 LARHTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 253
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 254 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 295
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 296 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 331

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 84
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 85  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                    +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 238 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 279
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 280 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 84
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 85  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                    +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 238 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 279
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 280 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 158/341 (46%), Gaps = 59/341 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRD---AAMIEIDVLQHLAKN 122
           +Y+ ++++GEG +G+V +  D +   R VA+K VR          + + E+ VL+HL   
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 123 DKGGSSH----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +          C   R   D    + +VFE +   L  +L +      P + +++   QL
Sbjct: 72  EHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLID 236
           L  + ++H  R++H DLKP+NIL+ SS  IKL   G  R  S +M               
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL------------- 176
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                      +S+V T  YRAPEV+L   ++ P D+WSVGCI  E+   + LF+   ++
Sbjct: 177 -----------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           + L  +   +G LP         G E + R    +  P  A   +S + ++K        
Sbjct: 226 DQLGKILDVIG-LP---------GEEDWPR---DVALPRQAFHSKSAQPIEKF------- 265
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
              V        DLL   L ++P++R++A  AL+HP+F++L
Sbjct: 266 ---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score =  114 bits (286), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 30  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 84
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 85  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 142 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                    +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 178 LARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 237
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 238 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 279
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 280 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 315

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score =  114 bits (285), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/342 (25%), Positives = 151/342 (44%), Gaps = 60/342 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D ++  ++A+K        ++ + R YR     E+ +L+H
Sbjct: 52  RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 106
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 107 MKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 163
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DFG
Sbjct: 164 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFG 199
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   +++ 
Sbjct: 200 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHIN 259
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L  + R  G  P  +I R                      +R  I ++ ++ + +N   
Sbjct: 260 QLQQIMRLTGTPPASVISRMPSHE-----------------ARNYINSLPQMPK-RNFAD 301
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           + +  A     DLL  +L  D  +R+TA +AL HP+F   ++
Sbjct: 302 VFIG-ANPLAVDLLEKMLVLDTDKRITASEALAHPYFSQYHD 342

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  114 bits (285), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++D+G
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDYG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score =  114 bits (285), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 158/342 (46%), Gaps = 59/342 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRD---AAMIEIDVLQHLAKN 122
           +Y+ ++++GEG +G+V +  D +   R VA+K VR          + + E+ VL+HL   
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 123 DKGGSSH----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +          C   R   D    + +VFE +   L  +L +      P + +++   QL
Sbjct: 72  EHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLID 236
           L  + ++H  R++H DLKP+NIL+ SS  IKL   G  R  S +M               
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL------------- 176
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                      +S+V T  YRAPEV+L   ++ P D+WSVGCI  E+   + LF+   ++
Sbjct: 177 -----------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           + L  +   +G LP         G E + R    +  P  A   +S + ++K        
Sbjct: 226 DQLGKILDVIG-LP---------GEEDWPR---DVALPRQAFHSKSAQPIEKF------- 265
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
              V        DLL   L ++P++R++A  AL+HP+F++L 
Sbjct: 266 ---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLE 304

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 156/339 (46%), Gaps = 58/339 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDK 124
           ++K L K+G GT+  V +  ++ T   VA+K V+  S       A+ EI +++ L   + 
Sbjct: 6   QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN- 64
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP----VDLVREFGRQLLE 180
                 V++ +     N + +VFE +   L  ++        P    ++LV+ F  QLL+
Sbjct: 65  -----IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQ 119
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
            +A+ H+ +++H DLKP+N+L                        + K   +KL DFG  
Sbjct: 120 GLAFCHENKILHRDLKPQNLL------------------------INKRGQLKLGDFGLA 155
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENL 296
            +        SS V T  YRAP+V++G   +S   D+WS GCIL E+ TG+ LF    + 
Sbjct: 156 RAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDE 215
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           E L ++   +G  P   +  +     KY                 +I+     D L+ ++
Sbjct: 216 EQLKLIFDIMG-TPNESLWPSVTKLPKY---------------NPNIQQRPPRD-LRQVL 258
Query: 357 SLHVDRA-RSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
             H        L D LHGLL+ +P  RL+A+QAL+HP+F
Sbjct: 259 QPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWF 297

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score =  113 bits (282), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++DF 
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDFY 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++ FG
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILGFG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score =  112 bits (281), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 157/376 (41%), Gaps = 90/376 (23%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-- 119
           E  + +Y +   +G G+FG V E +D ++ +R A+K V    +Y++  +  + VL H+  
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVLDHVNI 62
Query: 120 ----------------------------AKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG 151
                                        KN+   + H   I N      ++ ++ E + 
Sbjct: 63  IKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNP-SQNKYLNVIMEYVP 121
Query: 152 PSLFDFLKRNKYC--PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
            +L   LK         P++L+  +  QL  +V ++H L + H D+KP+N+L+ S     
Sbjct: 122 DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS----- 176
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQNHSSIVSTRHYRAPEVILGLGW 267
                             K + +KL DFGS      ++   + + +R YRAPE++LG   
Sbjct: 177 ------------------KDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATE 218
Query: 268 SYP-CDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYF 325
             P  D+WS+GC+  EL  G+ LF    +++ L  + + +G P  E MIR     TE  F
Sbjct: 219 YTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRF 278
Query: 326 RRGSRLNW----PEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE 381
                 +W    PEG                            S   DLL  +LRY+P  
Sbjct: 279 PTLKAKDWRKILPEG--------------------------TPSLAIDLLEQILRYEPDL 312
Query: 382 RLTARQALNHPFFRNL 397
           R+   +A+ HPFF +L
Sbjct: 313 RINPYEAMAHPFFDHL 328

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++D G
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDAG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score =  112 bits (279), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/339 (27%), Positives = 156/339 (46%), Gaps = 59/339 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRD---AAMIEIDVLQHLAKN 122
           +Y+ ++++GEG +G+V +  D +   R VA+K VR          + + E+ VL+HL   
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 123 DKGGSSH----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +          C   R   D    + +VFE +   L  +L +      P + +++   QL
Sbjct: 72  EHPNVVRLFDVCTVSRT--DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQL 129
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLID 236
           L  + ++H  R++H DLKP+NIL+ SS  IKL   G  R  S +M               
Sbjct: 130 LRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMAL------------- 176
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                      +S+V T  YRAPEV+L   ++ P D+WSVGCI  E+   + LF+   ++
Sbjct: 177 -----------TSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV 225
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           + L  +   +G LP         G E + R    +  P  A   +S + ++K        
Sbjct: 226 DQLGKILDVIG-LP---------GEEDWPR---DVALPRQAFHSKSAQPIEKF------- 265
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
              V        DLL   L ++P++R++A  AL+HP+F+
Sbjct: 266 ---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  112 bits (279), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++D G
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDGG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score =  111 bits (278), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 154/337 (45%), Gaps = 60/337 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           RY+ LS +G G +G V   +D +T  RVA+K        ++ + R YR     E+ +L+H
Sbjct: 23  RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-----ELRLLKH 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +   +  G           +  N + +V   +G  L + +K  K      D V+    Q+
Sbjct: 78  MKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD---DHVQFLIYQI 134
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + +   +K++D G
Sbjct: 135 LRGLKYIHSADIIHRDLKPSNL------------------------AVNEDCELKILDRG 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +   +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL TG  LF   ++++
Sbjct: 171 LARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID 230
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            L ++ R +G     ++++ S  +                 +R  I+++ ++ ++ N  +
Sbjct: 231 QLKLILRLVGTPGAELLKKISSES-----------------ARNYIQSLTQMPKM-NFAN 272
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           + +  A     DLL  +L  D  +R+TA QAL H +F
Sbjct: 273 VFIG-ANPLAVDLLEKMLVLDSDKRITAAQALAHAYF 308

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score =  110 bits (275), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 150/336 (44%), Gaps = 50/336 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRK--YRDAAMIEIDVLQHLAKNDK 124
           Y+ L  +G G +G V    D +T  +VAIK + R  +   +   A  E+ +L+H+   + 
Sbjct: 27  YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            G           D      +V   +G  L   +K  K      D ++    Q+L+ + Y
Sbjct: 87  IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGE---DRIQFLVYQMLKGLRY 143
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H   +IH DLKP N+                         + +   +K++DFG     +
Sbjct: 144 IHAAGIIHRDLKPGNL------------------------AVNEDCELKILDFGLARQAD 179
Query: 245 QNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
                 V TR YRAPEVIL  + ++   D+WSVGCI+ E+ TG+ LF+  ++L+ L  + 
Sbjct: 180 SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 239
Query: 304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA 363
           +  G  P   ++R      K + +G     PE  + ++   ++     L N   L V   
Sbjct: 240 KVTGTPPAEFVQRLQSDEAKNYMKG----LPE--LEKKDFASI-----LTNASPLAV--- 285
Query: 364 RSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                +LL  +L  D  +R+TA +AL HP+F +L++
Sbjct: 286 -----NLLEKMLVLDAEQRVTAGEALAHPYFESLHD 316

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 158/359 (44%), Gaps = 87/359 (24%)
Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
           GE     Y     +G G+FG V +    ++ E VAIK V   +++++  +  + +++H  
Sbjct: 35  GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKH-- 91
Query: 121 KNDKGGSSHCVQIRNWFDYRN-------HICIVFEKLGPSLF----DFLKRNKYCPFPVD 169
                   + V ++ +F Y N        + +V E +  +++     + K  +    P+ 
Sbjct: 92  -------PNVVDLKAFF-YSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQT--MPML 141
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
           L++ +  QLL S+AY+H + + H D+KP+N+LL                        P S
Sbjct: 142 LIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLD-----------------------PPS 178
Query: 230 SAIKLIDFGSTA--FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTG 286
             +KLIDFGS       + + S + +R+YRAPE+I G   ++   D+WS GC++ EL  G
Sbjct: 179 GVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQG 238
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
           + LF     ++ L  + + L                             G  SRE IK +
Sbjct: 239 QPLFPGESGIDQLVEIIKVL-----------------------------GTPSREQIKTM 269
Query: 347 K------KLDRLKNMVSLHVDRARST--LTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                  K  +++      V R R+     DL+  LL Y PS RLTA +AL HPFF  L
Sbjct: 270 NPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFDEL 328

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score =  109 bits (272), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/337 (27%), Positives = 146/337 (43%), Gaps = 55/337 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD--AAMIEIDVLQHLAKNDKG 125
           Y  L K+GEGT+  V +   + T   VA+K +R   +      A+ E+ +L+ L      
Sbjct: 4   YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK----- 58
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQLLESVA 183
             ++ V + +       + +VFE L   L  +L     C   +++  V+ F  QLL  +A
Sbjct: 59  -HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDD---CGNIINMHNVKLFLFQLLRGLA 114
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
           Y H  +++H DLKP+N+L+     +KL  +  + +  +P                +  +D
Sbjct: 115 YCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP----------------TKTYD 158
Query: 244 NQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
           N+     V T  YR P+++LG   +S   DMW VGCI  E+ TG  LF      E L  +
Sbjct: 159 NE-----VVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFI 213
Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
            R LG   E                     WP G +S E  K           +  H  R
Sbjct: 214 FRILGTPTEE-------------------TWP-GILSNEEFKTYNYPKYRAEALLSHAPR 253
Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
             S   DLL  LL+++   R++A  A+ HPFF +L E
Sbjct: 254 LDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 167/347 (48%), Gaps = 30/347 (8%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDA--AMIEIDVLQHLAKND 123
           +Y+++ K+G+G +G V +  DR+T E VA+K +  + +   DA     EI +L  L+   
Sbjct: 10  KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS--- 66
Query: 124 KGGSSHCVQIRNWF--DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             G  + V + N    D    + +VF+ +   L   ++ N   P     V     QL++ 
Sbjct: 67  --GHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYV---VYQLIKV 121
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL-IDFGST 240
           + Y+H   L+H D+KP NILL +   +K+  +  S S     R    ++ I L I+  + 
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRV---TNNIPLSINENTE 178
Query: 241 AFDNQNH--SSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
            FD+     +  V+TR YRAPE++LG   ++   DMWS+GCIL E+  G+ +F     + 
Sbjct: 179 NFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIK--AVKKLDRLKNM 355
            L   ER +G + +          +  F +    +  E    R+S K     K   L   
Sbjct: 239 QL---ERIIGVI-DFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLK 294
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF---FRNLNE 399
           ++   D     L DLL  LL+++P++R++A  AL HPF   F N NE
Sbjct: 295 INPKADCNEEAL-DLLDKLLQFNPNKRISANDALKHPFVSIFHNPNE 340

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 69/336 (20%)
Query: 72  SKMGEGTFGRVLECWDRQTQERVAIKV--------VRSIRKYRDAAMIEIDVLQHLAKND 123
           + +G G +G V    D+++ E+VAIK         + + R YR     E+ +L+H+   +
Sbjct: 48  THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-----ELLLLKHMQHEN 102
Query: 124 KGG----SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
             G     +    +RN++D        F  + P +   L++     F  + ++    Q+L
Sbjct: 103 VIGLLDVFTPASSLRNFYD--------FYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQML 154
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           + + Y+H   ++H DLKP N+                         + +   +K++DFG 
Sbjct: 155 KGLKYIHSAGVVHRDLKPGNL------------------------AVNEDCELKILDFGL 190
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
               +   +  V TR YRAPEVIL  + ++   D+WSVGCI+ E+ TG+ LF+  + L+ 
Sbjct: 191 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 250
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
           L  + +  G +P         GTE       +LN      ++  I+++ +  R K+   L
Sbjct: 251 LTQILKVTG-VP---------GTEFV----QKLN---DKAAKSYIQSLPQTPR-KDFTQL 292
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
              RA     DLL  +L  D  +RLTA QAL HPFF
Sbjct: 293 -FPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 327

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 154/336 (45%), Gaps = 69/336 (20%)
Query: 72  SKMGEGTFGRVLECWDRQTQERVAIKV--------VRSIRKYRDAAMIEIDVLQHLAKND 123
           + +G G +G V    D+++ E+VAIK         + + R YR     E+ +L+H+   +
Sbjct: 30  THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-----ELLLLKHMQHEN 84
Query: 124 KGG----SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
             G     +    +RN++D        F  + P +   L++     F  + ++    Q+L
Sbjct: 85  VIGLLDVFTPASSLRNFYD--------FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQML 136
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           + + Y+H   ++H DLKP N+                         + +   +K++DFG 
Sbjct: 137 KGLKYIHSAGVVHRDLKPGNL------------------------AVNEDCELKILDFGL 172
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
               +   +  V TR YRAPEVIL  + ++   D+WSVGCI+ E+ TG+ LF+  + L+ 
Sbjct: 173 ARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 232
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
           L  + +  G +P         GTE       +LN      ++  I+++ +  R K+   L
Sbjct: 233 LTQILKVTG-VP---------GTEFV----QKLN---DKAAKSYIQSLPQTPR-KDFTQL 274
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
              RA     DLL  +L  D  +RLTA QAL HPFF
Sbjct: 275 -FPRASPQAADLLEKMLELDVDKRLTAAQALTHPFF 309

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 155/342 (45%), Gaps = 66/342 (19%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
           +Y+ L K+GEGT+G V +  +R+T E VA+K VR          +A+ EI +L+ L    
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--- 59
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD--LVREFGRQLLES 181
                + V++ +       + +VFE     L  +      C   +D  +V+ F  QLL+ 
Sbjct: 60  ---HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKG 113
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + + H   ++H DLKP+N+L+  +  +KL  +  + +  +P RC                
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC---------------- 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-GEALFQTHENLEHL 299
                +S+ V T  YR P+V+ G   +S   DMWS GCI  EL   G  LF  ++  + L
Sbjct: 158 -----YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQL 212
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRL----NWPEGAVSRESIKAVKKLDRLKNM 355
             + R LG             TE+ +   ++L     +P    +   +  V KL+     
Sbjct: 213 KRIFRLLG-----------TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN----- 256
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                    +T  DLL  LL+ +P +R++A +AL HP+F + 
Sbjct: 257 ---------ATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score =  105 bits (262), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/352 (26%), Positives = 157/352 (44%), Gaps = 86/352 (24%)
Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMI 111
           G ++ +   +L+  Y+ + K+G G +G VL C D+ T    AIK++R  S+    ++ ++
Sbjct: 25  GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84
Query: 112 E-IDVLQHLAKNDKGGSSHCVQIRNWF-DYRNHICIVFEKLGPSLFD-FLKRNKYCPFPV 168
           E + VL+ L         + +++ ++F D RN+  ++    G  LFD  + R K+     
Sbjct: 85  EEVAVLKLL------DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDA 138
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
            ++    +Q+L  V Y+H   ++H DLKPEN+LL S E                     K
Sbjct: 139 AVII---KQVLSGVTYLHKHNIVHRDLKPENLLLESKE---------------------K 174
Query: 229 SSAIKLIDFG-STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
            + IK++DFG S  F+NQ      + T +Y APEV L   +   CD+WS+G IL  L  G
Sbjct: 175 DALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEV-LRKKYDEKCDVWSIGVILFILLAG 233
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
              F                G   + ++R+  +G  KY F      N  EGA        
Sbjct: 234 YPPFG---------------GQTDQEILRKVEKG--KYTFDSPEWKNVSEGA-------- 268
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                                  DL+  +L++D   R++A+QAL HP+ + +
Sbjct: 269 ----------------------KDLIKQMLQFDSQRRISAQQALEHPWIKEM 298

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score =  104 bits (259), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/342 (26%), Positives = 154/342 (45%), Gaps = 66/342 (19%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
           +Y+ L K+GEGT+G V +  +R+T E VA+K VR          +A+ EI +L+ L    
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--- 59
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD--LVREFGRQLLES 181
                + V++ +       + +VFE     L  +      C   +D  +V+ F  QLL+ 
Sbjct: 60  ---HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS---CNGDLDPEIVKSFLFQLLKG 113
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + + H   ++H DLKP+N+L+  +  +KL  +  + +  +P RC                
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC---------------- 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-GEALFQTHENLEHL 299
                +S+ V T  YR P+V+ G   +S   DMWS GCI  EL      LF  ++  + L
Sbjct: 158 -----YSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQL 212
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRL----NWPEGAVSRESIKAVKKLDRLKNM 355
             + R LG             TE+ +   ++L     +P    +   +  V KL+     
Sbjct: 213 KRIFRLLG-----------TPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLN----- 256
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                    +T  DLL  LL+ +P +R++A +AL HP+F + 
Sbjct: 257 ---------ATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 63/346 (18%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQH 118
           + L  +Y+ L K+GEGT+G V +  D Q +  VA+K +R           A+ EI +L+ 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           L         + V + +       + +VFE +   L   L  NK        ++ +  QL
Sbjct: 76  LHH------PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQL 128
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  VA+ H  R++H DLKP+N+L+ S   +KL  +  + +  +P R              
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-------------- 174
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                  +++  V T  YRAP+V++G   +S   D+WS+GCI  E+ TG+ LF    + +
Sbjct: 175 -------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
Query: 298 HLAMMERALG-PLPEH--MIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDRL 352
            L  +   LG P P     ++      ++ F+   +  W        +E I         
Sbjct: 228 QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGI--------- 278
Query: 353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
                           DLL  +L +DP++R++AR A+NHP+F++L+
Sbjct: 279 ----------------DLLSNMLCFDPNKRISARDAMNHPYFKDLD 308

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 151/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 38  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++       ++ + +V   +G  L+  LK         D +  F
Sbjct: 94  ILLRFRHENIIGINDIIRAPTIEQMKD-VYLVTHLMGADLYKLLKTQH---LSNDHICYF 149
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 185
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 186 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 246 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 276
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 277 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 156/346 (45%), Gaps = 63/346 (18%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQH 118
           + L  +Y+ L K+GEGT+G V +  D Q +  VA+K +R           A+ EI +L+ 
Sbjct: 17  QGLMEKYQKLEKVGEGTYGVVYKAKDSQGR-IVALKRIRLDAEDEGIPSTAIREISLLKE 75
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           L         + V + +       + +VFE +   L   L  NK        ++ +  QL
Sbjct: 76  LHH------PNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKIYLYQL 128
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  VA+ H  R++H DLKP+N+L+ S   +KL  +  + +  +P R              
Sbjct: 129 LRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-------------- 174
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                  +++  V T  YRAP+V++G   +S   D+WS+GCI  E+ TG+ LF    + +
Sbjct: 175 -------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
Query: 298 HLAMMERALG-PLPEH--MIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDRL 352
            L  +   LG P P     ++      ++ F+   +  W        +E I         
Sbjct: 228 QLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGI--------- 278
Query: 353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
                           DLL  +L +DP++R++AR A+NHP+F++L+
Sbjct: 279 ----------------DLLSNMLCFDPNKRISARDAMNHPYFKDLD 308

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 94/348 (27%), Positives = 156/348 (44%), Gaps = 63/348 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           R+++    G+GTFG V    ++ T   VAIK V    ++R+    E+ ++Q LA      
Sbjct: 24  RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQDLAVLHH-- 78
Query: 127 SSHCVQIRNWF------DYRNHICIVFEKLGPSLFDFLKRNKY----CPFPVDLVREFGR 176
             + VQ++++F      D R+    V  +  P       RN Y     P P+ L++ F  
Sbjct: 79  -PNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPI-LIKVFLF 136
Query: 177 QLLESVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
           QL+ S+  +H   + + H D+KP N+L+  ++                         +KL
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEAD-----------------------GTLKL 173
Query: 235 IDFGSTA--FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQ 291
            DFGS      ++ + + + +R+YRAPE+I G   ++   D+WSVGCI  E+  GE +F+
Sbjct: 174 CDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFR 233
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
              +   L  + R LG     ++R              +LN     V   + K +     
Sbjct: 234 GDNSAGQLHEIVRVLGCPSREVLR--------------KLNPSHTDVDLYNSKGIP---- 275
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
             N+ S H  +      DLL  LL+Y P ER+   +AL HP+F  L++
Sbjct: 276 WSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELHD 323

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  103 bits (256), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 146/340 (42%), Gaps = 84/340 (24%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHL 119
               RY I+  +G+G+FG VL+C DR TQ+  A+KV+ ++  K +D + I  E+++L+ L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFPVDLVREFGRQ 177
                    + +++    +  +   IV E   G  LFD  +KR ++     D  R   +Q
Sbjct: 79  ------DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH--DAAR-IIKQ 129
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +   + YMH   ++H DLKPENILL S E                     K   IK+IDF
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKE---------------------KDCDIKIIDF 168
Query: 238 G-STAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           G ST F  N      + T +Y APEV+ G  +   CD+WS G IL  L +G   F     
Sbjct: 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPF----- 222
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
                      G     +++R   G  KY       + P+     +  K           
Sbjct: 223 ----------YGKNEYDILKRVETG--KY-----AFDLPQWRTISDDAK----------- 254
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                        DL+  +L + PS R+TA Q L HP+ +
Sbjct: 255 -------------DLIRKMLTFHPSLRITATQCLEHPWIQ 281

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/338 (27%), Positives = 144/338 (42%), Gaps = 59/338 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV----RSIRK--YRDAAMIEIDVLQHLA 120
           RY+ L  +GEG F  V +  D+ T + VAIK +    RS  K      A+ EI +LQ L+
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS 70
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                   + + + + F ++++I +VF+ +   L   +K N     P   ++ +    L+
Sbjct: 71  H------PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH-IKAYMLMTLQ 123
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            + Y+H   ++H DLKP N+LL  +  +KL  +  + S                  FGS 
Sbjct: 124 GLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKS------------------FGSP 165
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
              N+ +   V TR YRAPE++ G   +    DMW+VGCIL EL           +L+ L
Sbjct: 166 ---NRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL 222
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
             +   LG   E                     WP+      S+           +   H
Sbjct: 223 TRIFETLGTPTEE-------------------QWPDMC----SLPDYVTFKSFPGIPLHH 259
Query: 360 V-DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
           +   A   L DL+ GL  ++P  R+TA QAL   +F N
Sbjct: 260 IFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSN 297

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 78  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 169
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 149/351 (42%), Gaps = 68/351 (19%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 76  ILLAFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 131
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +S +K+
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TSDLKI 167
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 168 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
Query: 288 ALFQTHENLEHLAMMERALG-PLPEHM---IRRASRGTEKYFRRGSRLNWPEGAVSRESI 343
            +F     L+ L  +   LG P  E +   I   +R         +++ W          
Sbjct: 228 PIFPGKHYLDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPW---------- 277
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                 +RL          A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 278 ------NRL-------FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 74  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 129
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 165
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 166 XDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 226 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNXII 256
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 38  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 93
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 94  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 149
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 150 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 185
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 186 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 246 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 276
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 277 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 333

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 76  ILLAFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 131
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 167
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 168 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 228 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 258
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 20  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 75
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 76  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 131
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 132 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 167
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 168 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 228 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 258
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 259 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 315

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 74  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 129
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 165
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 226 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNXII 256
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 23  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 79  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 134
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 170
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 171 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 231 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 261
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 262 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 24  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 79
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 80  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 135
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 136 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 171
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 172 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 232 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 262
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 263 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 319

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 15  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 70
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 71  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 126
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 127 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 162
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 163 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 223 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 253
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 254 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 310

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 78  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 169
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 16  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 72  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 127
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 163
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 164 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 224 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 254
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 255 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score =  101 bits (252), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 145/340 (42%), Gaps = 84/340 (24%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHL 119
               RY I+  +G+G+FG VL+C DR TQ+  A+KV+ ++  K +D + I  E+++L+ L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFPVDLVREFGRQ 177
                    + +++    +  +   IV E   G  LFD  +KR ++     D  R   +Q
Sbjct: 79  ------DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH--DAAR-IIKQ 129
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +   + YMH   ++H DLKPENILL S E                     K   IK+IDF
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKE---------------------KDCDIKIIDF 168
Query: 238 G-STAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           G ST F  N      + T +Y APEV+ G  +   CD+WS G IL  L +G   F     
Sbjct: 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNE 227
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
            + L  +E                 T KY       + P+     +  K           
Sbjct: 228 YDILKRVE-----------------TGKY-----AFDLPQWRTISDDAK----------- 254
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                        DL+  +L + PS R+TA Q L HP+ +
Sbjct: 255 -------------DLIRKMLTFHPSLRITATQCLEHPWIQ 281

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 97/340 (28%), Positives = 145/340 (42%), Gaps = 84/340 (24%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHL 119
               RY I+  +G+G+FG VL+C DR TQ+  A+KV+ ++  K +D + I  E+++L+ L
Sbjct: 19  TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFPVDLVREFGRQ 177
                    + +++    +  +   IV E   G  LFD  +KR ++     D  R   +Q
Sbjct: 79  ------DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEH--DAAR-IIKQ 129
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +   + YMH   ++H DLKPENILL S E                     K   IK+IDF
Sbjct: 130 VFSGITYMHKHNIVHRDLKPENILLESKE---------------------KDCDIKIIDF 168
Query: 238 G-STAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           G ST F  N      + T +Y APEV+ G  +   CD+WS G IL  L +G   F     
Sbjct: 169 GLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNE 227
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
            + L  +E                 T KY       + P+     +  K           
Sbjct: 228 YDILKRVE-----------------TGKY-----AFDLPQWRTISDDAK----------- 254
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                        DL+  +L + PS R+TA Q L HP+ +
Sbjct: 255 -------------DLIRKMLTFHPSLRITATQCLEHPWIQ 281

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 26  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 81
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 82  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 137
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 138 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 173
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 174 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 234 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 264
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 265 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 321

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 74  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 129
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 165
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 226 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 256
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 78  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 169
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score =  101 bits (252), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 74  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 129
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 165
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 226 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 256
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 18  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIK 73
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 74  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 129
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 130 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TXDLKI 165
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 166 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 226 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 256
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 257 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 313

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 145/349 (41%), Gaps = 65/349 (18%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----------SIRKYRDA 108
           LG   T RY+ ++++G G +G V +  D  +   VA+K VR            I   R+ 
Sbjct: 3   LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREV 62
Query: 109 AMIE-IDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           A++  ++  +H   N       C   R   D    + +VFE +   L  +L +      P
Sbjct: 63  ALLRRLEAFEH--PNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLP 118
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
            + +++  RQ L  + ++H   ++H DLKPENIL+ S                       
Sbjct: 119 AETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG---------------------- 156
Query: 228 KSSAIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
               +KL DFG     +     + +V T  YRAPEV+L   ++ P DMWSVGCI  E+  
Sbjct: 157 --GTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR 214
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
            + LF  +   + L  +   +G  PE    R              ++ P GA      + 
Sbjct: 215 RKPLFCGNSEADQLGKIFDLIGLPPEDDWPR-------------DVSLPRGAFPPRGPRP 261
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           V+ +          V     +   LL  +L ++P +R++A +AL H + 
Sbjct: 262 VQSV----------VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score =  101 bits (251), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 92/352 (26%), Positives = 148/352 (42%), Gaps = 70/352 (19%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 16  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 71
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 72  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 127
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 128 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 163
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 164 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
Query: 288 ALFQTHENLEHLAMMERALGPLPEH-----MIRRASRGTEKYFRRGSRLNWPEGAVSRES 342
            +F     L+ L  +   LG  PE      +I   +R         +++ W         
Sbjct: 224 PIFPGKHYLDQLNHILGILGS-PEQEDLNCIINLKARNYLLSLPHKNKVPW--------- 273
Query: 343 IKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  +RL          A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 274 -------NRL-------FPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 311

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 149/357 (41%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 78  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 169
Query: 235 IDFGSTAFDNQNHS------SIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H         V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 170 CDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 149/357 (41%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 23  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 78
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 79  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 134
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 135 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 170
Query: 235 IDFGSTAFDNQNHS------SIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H         V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 171 CDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 231 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 261
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 262 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 318

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/357 (26%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAIK +     + Y    + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 78  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKCQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 169
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 160/377 (42%), Gaps = 96/377 (25%)
Query: 31  GHEGATAAAAK---HVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD 87
           GH   T+       H +P        G +V +     + RYK    +G+G+FG V+ C D
Sbjct: 20  GHAAGTSGGPGDHLHATP--------GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKD 71
Query: 88  RQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI 143
           + T +  A+KV+  R +++  D   +  E+ +L+ L         + +++  +F+ + + 
Sbjct: 72  KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL------DHPNIMKLYEFFEDKGYF 125
Query: 144 CIVFE-KLGPSLFD-FLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENIL 201
            +V E   G  LFD  + R ++    VD  R   RQ+L  + YMH  +++H DLKPEN+L
Sbjct: 126 YLVGEVYTGGELFDEIISRKRFSE--VDAARII-RQVLSGITYMHKNKIVHRDLKPENLL 182
Query: 202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAP 259
           L S                       K + I++IDFG ST F+ ++     + T +Y AP
Sbjct: 183 LESK---------------------SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 221
Query: 260 EVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASR 319
           EV+ G  +   CD+WS G IL  L +G   F      + L  +E+               
Sbjct: 222 EVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG-------------- 266
Query: 320 GTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP 379
              KY         P+     ES K                        DL+  +L Y P
Sbjct: 267 ---KY-----TFELPQWKKVSESAK------------------------DLIRKMLTYVP 294
Query: 380 SERLTARQALNHPFFRN 396
           S R++AR AL+H + + 
Sbjct: 295 SMRISARDALDHEWIQT 311

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 92/357 (25%), Positives = 150/357 (42%), Gaps = 80/357 (22%)
Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEID 114
           VF++G    PRY  LS +GEG +G V   +D   + RVAI+ +     + Y    + EI 
Sbjct: 22  VFDVG----PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIK 77
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L      +  G +  ++     +    + IV + +   L+  LK         D +  F
Sbjct: 78  ILLRFRHENIIGINDIIRAPT-IEQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYF 133
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+L  + Y+H   ++H DLKP N+LL +                        +  +K+
Sbjct: 134 LYQILRGLKYIHSANVLHRDLKPSNLLLNT------------------------TCDLKI 169
Query: 235 IDFGSTAFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE 287
            DFG     + +H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +  
Sbjct: 170 CDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            +F     L+ L      LG L                          G+ S+E +  + 
Sbjct: 230 PIFPGKHYLDQL---NHILGIL--------------------------GSPSQEDLNCII 260
Query: 348 KLDRLKNMVSL-HVDR---------ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            L     ++SL H ++         A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 261 NLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 160/377 (42%), Gaps = 96/377 (25%)
Query: 31  GHEGATAAAAK---HVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWD 87
           GH   T+       H +P        G +V +     + RYK    +G+G+FG V+ C D
Sbjct: 19  GHAAGTSGGPGDHLHATP--------GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKD 70
Query: 88  RQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI 143
           + T +  A+KV+  R +++  D   +  E+ +L+ L         + +++  +F+ + + 
Sbjct: 71  KITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL------DHPNIMKLYEFFEDKGYF 124
Query: 144 CIVFE-KLGPSLFD-FLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENIL 201
            +V E   G  LFD  + R ++    VD  R   RQ+L  + YMH  +++H DLKPEN+L
Sbjct: 125 YLVGEVYTGGELFDEIISRKRFSE--VDAARII-RQVLSGITYMHKNKIVHRDLKPENLL 181
Query: 202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAP 259
           L S                       K + I++IDFG ST F+ ++     + T +Y AP
Sbjct: 182 LESK---------------------SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAP 220
Query: 260 EVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASR 319
           EV+ G  +   CD+WS G IL  L +G   F      + L  +E+               
Sbjct: 221 EVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG-------------- 265
Query: 320 GTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP 379
              KY         P+     ES K                        DL+  +L Y P
Sbjct: 266 ---KY-----TFELPQWKKVSESAK------------------------DLIRKMLTYVP 293
Query: 380 SERLTARQALNHPFFRN 396
           S R++AR AL+H + + 
Sbjct: 294 SMRISARDALDHEWIQT 310

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 148/345 (42%), Gaps = 72/345 (20%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKND 123
           +Y  L K+GEGT+G V +       E  A+K +R  ++        + EI +L+ L    
Sbjct: 3   KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK--- 58
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLV--REFGRQLLES 181
               S+ V++ +    +  + +VFE L   L   L     C   ++ V  + F  QLL  
Sbjct: 59  ---HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLNG 112
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           +AY HD R++H DLKP+N+L+     +K+  +  + +  +P R                 
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR----------------- 155
Query: 242 FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                ++  V T  YRAP+V++G   +S   D+WSVGCI  E+  G  LF      + L 
Sbjct: 156 ----KYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLM 211
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG                     +  NWP       ++  + K D   N      
Sbjct: 212 RIFRILG-------------------TPNSKNWP-------NVTELPKYD--PNFTVYEP 243
Query: 361 DRARSTL-------TDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
               S L        DLL  +L+ DP++R+TA+QAL H +F+  N
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 65  TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--------SIRKYRDAAMIE-IDV 115
           T RY+ ++++G G +G V +  D  +   VA+K VR         I   R+ A++  ++ 
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 175
            +H   N       C   R   D    + +VFE +   L  +L +      P + +++  
Sbjct: 63  FEH--PNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           RQ L  + ++H   ++H DLKPENIL+ S                           +KL 
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSG------------------------GTVKLA 154
Query: 236 DFGSTAFDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
           DFG     +   +   +V T  YRAPEV+L   ++ P DMWSVGCI  E+   + LF  +
Sbjct: 155 DFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 214
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
              + L  +   +G  PE    R              ++ P GA      + V+ +    
Sbjct: 215 SEADQLGKIFDLIGLPPEDDWPR-------------DVSLPRGAFPPRGPRPVQSV---- 257
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                 V     +   LL  +L ++P +R++A +AL H + 
Sbjct: 258 ------VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 148/345 (42%), Gaps = 72/345 (20%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKND 123
           +Y  L K+GEGT+G V +       E  A+K +R  ++        + EI +L+ L    
Sbjct: 3   KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK--- 58
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLV--REFGRQLLES 181
               S+ V++ +    +  + +VFE L   L   L     C   ++ V  + F  QLL  
Sbjct: 59  ---HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLNG 112
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           +AY HD R++H DLKP+N+L+     +K+  +  + +  +P R                 
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR----------------- 155
Query: 242 FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                ++  V T  YRAP+V++G   +S   D+WSVGCI  E+  G  LF      + L 
Sbjct: 156 ----KYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG                     +  NWP       ++  + K D   N      
Sbjct: 212 RIFRILG-------------------TPNSKNWP-------NVTELPKYD--PNFTVYEP 243
Query: 361 DRARSTL-------TDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
               S L        DLL  +L+ DP++R+TA+QAL H +F+  N
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 65  TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--------SIRKYRDAAMIE-IDV 115
           T RY+ ++++G G +G V +  D  +   VA+K VR         I   R+ A++  ++ 
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 175
            +H   N       C   R   D    + +VFE +   L  +L +      P + +++  
Sbjct: 63  FEH--PNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           RQ L  + ++H   ++H DLKPENIL+ S                           +KL 
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSG------------------------GTVKLA 154
Query: 236 DFGSTAFDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
           DFG     +   +   +V T  YRAPEV+L   ++ P DMWSVGCI  E+   + LF  +
Sbjct: 155 DFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 214
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
              + L  +   +G  PE    R              ++ P GA      + V+ +    
Sbjct: 215 SEADQLGKIFDLIGLPPEDDWPR-------------DVSLPRGAFPPRGPRPVQSV---- 257
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                 V     +   LL  +L ++P +R++A +AL H + 
Sbjct: 258 ------VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 143/341 (41%), Gaps = 62/341 (18%)
Query: 65  TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--------SIRKYRDAAMIE-IDV 115
           T RY+ ++++G G +G V +  D  +   VA+K VR         I   R+ A++  ++ 
Sbjct: 3   TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEA 62
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 175
            +H   N       C   R   D    + +VFE +   L  +L +      P + +++  
Sbjct: 63  FEH--PNVVRLMDVCATSRT--DREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 118
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           RQ L  + ++H   ++H DLKPENIL+ S                           +KL 
Sbjct: 119 RQFLRGLDFLHANCIVHRDLKPENILVTSG------------------------GTVKLA 154
Query: 236 DFGSTAFDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
           DFG     +   +   +V T  YRAPEV+L   ++ P DMWSVGCI  E+   + LF  +
Sbjct: 155 DFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGN 214
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
              + L  +   +G  PE    R              ++ P GA      + V+ +    
Sbjct: 215 SEADQLGKIFDLIGLPPEDDWPR-------------DVSLPRGAFPPRGPRPVQSV---- 257
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                 V     +   LL  +L ++P +R++A +AL H + 
Sbjct: 258 ------VPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 154/343 (44%), Gaps = 62/343 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           R + L  +G G +G V   +D + +++VA+K        ++ + R YR     E+ +L+H
Sbjct: 29  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           L   +  G           +  + + +V   +G  L + +K         + V+    QL
Sbjct: 84  LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSD---EHVQFLVYQL 140
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + Y+H   +IH DLKP N+                         + + S ++++DFG
Sbjct: 141 LRGLKYIHSAGIIHRDLKPSNV------------------------AVNEDSELRILDFG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                ++  +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL  G+ALF   + ++
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236
Query: 298 HLA-MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
            L  +ME    P PE + + +S     Y +  S    P+        K +  + R  N +
Sbjct: 237 QLKRIMEVVGTPSPEVLAKISSEHARTYIQ--SLPPMPQ--------KDLSSIFRGANPL 286
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           ++          DLL  +L  D  +R++A +AL H +F   ++
Sbjct: 287 AI----------DLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 319

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 99.4 bits (246), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 148/345 (42%), Gaps = 72/345 (20%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKND 123
           +Y  L K+GEGT+G V +       E  A+K +R  ++        + EI +L+ L    
Sbjct: 3   KYHGLEKIGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK--- 58
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLV--REFGRQLLES 181
               S+ V++ +    +  + +VFE L   L   L     C   ++ V  + F  QLL  
Sbjct: 59  ---HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLD---VCEGGLESVTAKSFLLQLLNG 112
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           +AY HD R++H DLKP+N+L+     +K+  +  + +  +P R                 
Sbjct: 113 IAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR----------------- 155
Query: 242 FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                ++  + T  YRAP+V++G   +S   D+WSVGCI  E+  G  LF      + L 
Sbjct: 156 ----KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R LG                     +  NWP       ++  + K D   N      
Sbjct: 212 RIFRILG-------------------TPNSKNWP-------NVTELPKYD--PNFTVYEP 243
Query: 361 DRARSTL-------TDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
               S L        DLL  +L+ DP++R+TA+QAL H +F+  N
Sbjct: 244 LPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 155/351 (44%), Gaps = 85/351 (24%)
Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
           G +V +     + RYK    +G+G+FG V+ C D+ T +  A+KV+  R +++  D   +
Sbjct: 14  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 112 --EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFP 167
             E+ +L+ L         + +++  +F+ + +  +V E   G  LFD  + R ++    
Sbjct: 74  LREVQLLKQL------DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-- 125
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           VD  R   RQ+L  + YMH  +++H DLKPEN+LL S                       
Sbjct: 126 VDAARII-RQVLSGITYMHKNKIVHRDLKPENLLLESK---------------------S 163
Query: 228 KSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           K + I++IDFG ST F+ ++     + T +Y APEV+ G  +   CD+WS G IL  L +
Sbjct: 164 KDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 222
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
           G   F                G     ++++  +G  KY         P+     ES K 
Sbjct: 223 GCPPFN---------------GANEYDILKKVEKG--KY-----TFELPQWKKVSESAK- 259
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                  DL+  +L Y PS R++AR AL+H + + 
Sbjct: 260 -----------------------DLIRKMLTYVPSMRISARDALDHEWIQT 287

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 99.0 bits (245), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 146/345 (42%), Gaps = 64/345 (18%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLA 120
           ++ PRY  L  +GEG +G V   +D   + RVAIK +     + Y    + EI +L    
Sbjct: 40  DVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFR 99
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
             +  G    ++       R+ + IV + +   L+  LK  +      D +  F  Q+L 
Sbjct: 100 HENVIGIRDILRASTLEAMRD-VYIVQDLMETDLYKLLKSQQ---LSNDHICYFLYQILR 155
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            + Y+H   ++H DLKP N+L+ +                        +  +K+ DFG  
Sbjct: 156 GLKYIHSANVLHRDLKPSNLLINT------------------------TCDLKICDFGLA 191
Query: 241 AFDNQNH------SSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTH 293
              +  H      +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +   +F   
Sbjct: 192 RIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 251
Query: 294 ENLEHLAMMERALG-PLPEHM---IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
             L+ L  +   LG P  E +   I   +R   +     +++ W          K   K 
Sbjct: 252 HYLDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAW---------AKLFPKS 302
Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           D              S   DLL  +L ++P++R+T  +AL HP+ 
Sbjct: 303 D--------------SKALDLLDRMLTFNPNKRITVEEALAHPYL 333

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 155/344 (45%), Gaps = 64/344 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           R + L  +G G +G V   +D + +++VA+K        ++ + R YR     E+ +L+H
Sbjct: 29  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-----ELRLLKH 83
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL-VREFGRQ 177
           L   +  G           +  + + +V   +G  L + +K    C    D  V+    Q
Sbjct: 84  LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK----CQALSDEHVQFLVYQ 139
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           LL  + Y+H   +IH DLKP N+                         + + S ++++DF
Sbjct: 140 LLRGLKYIHSAGIIHRDLKPSNV------------------------AVNEDSELRILDF 175
Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
           G     ++  +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL  G+ALF   + +
Sbjct: 176 GLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYI 235
Query: 297 EHLA-MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           + L  +ME    P PE + + +S     Y +  S    P+        K +  + R  N 
Sbjct: 236 DQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--SLPPMPQ--------KDLSSIFRGANP 285
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +++          DLL  +L  D  +R++A +AL H +F   ++
Sbjct: 286 LAI----------DLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 319

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 152/341 (44%), Gaps = 67/341 (19%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHL-AKN 122
           +Y+ L  +GEG++G V++C ++ T   VAIK        +  +  AM EI +L+ L  +N
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHEN 85
Query: 123 DKGGSSHCVQIRNW---FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                  C + + W   F++ +H  +   +L P+  D+            +V+++  Q++
Sbjct: 86  LVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDY-----------QVVQKYLFQII 134
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
             + + H   +IH D+KPENIL                        + +S  +KL DFG 
Sbjct: 135 NGIGFCHSHNIIHRDIKPENIL------------------------VSQSGVVKLCDFGF 170
Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
             + A   + +   V+TR YRAPE+++G + +    D+W++GC++ E+  GE LF    +
Sbjct: 171 ARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD 230
Query: 296 LEHLAMMERALGPL-PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
           ++ L  +   LG L P H         ++ F +          V    IK  + L+R   
Sbjct: 231 IDQLYHIMMCLGNLIPRH---------QELFNKNPVF----AGVRLPEIKEREPLER--- 274
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                  +    + DL    L  DP +R    + L+H FF+
Sbjct: 275 ----RYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQ 311

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 110
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 169
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 170 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 206
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 207 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 266
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 267 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 319
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 320 ---------------LLEYTPTARLTPLEACAHSFFDELRD 345

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 98.2 bits (243), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 66  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 114
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 173
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 174 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 210
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 211 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 270
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 271 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 323
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 324 ---------------LLEYTPTARLTPLEACAHSFFDELRD 349

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score = 98.2 bits (243), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 94/354 (26%), Positives = 154/354 (43%), Gaps = 85/354 (24%)
Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
           G +V +     + RYK    +G+G+FG V+ C D+ T +  A+KV+  R +++  D   +
Sbjct: 20  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 79
Query: 112 --EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFP 167
             E+ +L+ L         + +++  +F+ + +  +V E   G  LFD  + R ++    
Sbjct: 80  LREVQLLKQL------DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-- 131
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           VD  R   RQ+L  + YMH  +++H DLKPEN+LL S                       
Sbjct: 132 VDAARII-RQVLSGITYMHKNKIVHRDLKPENLLLESK---------------------S 169
Query: 228 KSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           K + I++IDFG ST F+ ++     + T +Y APEV+ G  +   CD+WS G IL  L +
Sbjct: 170 KDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 228
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
           G   F      + L  +E+                  KY         P+     ES K 
Sbjct: 229 GCPPFNGANEYDILKKVEKG-----------------KY-----TFELPQWKKVSESAK- 265
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                                  DL+  +L Y PS R++AR AL+H + +   +
Sbjct: 266 -----------------------DLIRKMLTYVPSMRISARDALDHEWIQTYTK 296

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 98.2 bits (243), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 33  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 81
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 82  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 140
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 141 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 177
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 178 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 237
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 238 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 290
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 291 ---------------LLEYTPTARLTPLEACAHSFFDELRD 316

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 97.8 bits (242), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 155
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 214
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 215 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 251
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 252 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 311
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 312 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 364
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 365 ---------------LLEYTPTARLTPLEACAHSFFDELRD 390

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 97.8 bits (242), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 56  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 104
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 163
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 164 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 200
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 201 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 260
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 261 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 313
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 314 ---------------LLEYTPTARLTPLEACAHSFFDELRD 339

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 97.8 bits (242), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 62  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 110
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 169
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 170 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 206
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 207 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 266
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 267 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 319
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 320 ---------------LLEYTPTARLTPLEACAHSFFDELRD 345

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 97.8 bits (242), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 64  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 112
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 171
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 172 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 208
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 209 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 268
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 269 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 321
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 322 ---------------LLEYTPTARLTPLEACAHSFFDELRD 347

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 88
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 89  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 147
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 148 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 184
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 185 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 244
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 245 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 297
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 298 ---------------LLEYTPTARLTPLEACAHSFFDELRD 323

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 40  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 88
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 89  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 147
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 148 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 184
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 185 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 244
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 245 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 297
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 298 ---------------LLEYTPTARLTPLEACAHSFFDELRD 323

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 36  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 84
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 85  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 143
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 144 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 180
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 181 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 240
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 241 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 293
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 294 ---------------LLEYTPTARLTPLEACAHSFFDELRD 319

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 41  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 89
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 90  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 148
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 149 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 185
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 186 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 245
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 246 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 298
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 299 ---------------LLEYTPTARLTPLEACAHSFFDELRD 324

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 47  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 95
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 96  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 154
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 155 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 191
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 192 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 251
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 252 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 304
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 305 ---------------LLEYTPTARLTPLEACAHSFFDELRD 330

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 29  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 77
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 78  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 136
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 137 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 173
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 174 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 233
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 234 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 286
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 287 ---------------LLEYTPTARLTPLEACAHSFFDELRD 312

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 32  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 80
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 81  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 139
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 140 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 176
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 177 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 236
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 237 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 289
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 290 ---------------LLEYTPTARLTPLEACAHSFFDELRD 315

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 77  RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 147/341 (43%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   +++++    E+ +++ L         HC  +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 145/332 (43%), Gaps = 48/332 (14%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
           RY+ ++K+GEGT+G V +  D  T E VAIK +R           A+ E+ +L+ L   +
Sbjct: 35  RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                  +++++   + + + ++FE     L  ++ +N      V  ++ F  QL+  V 
Sbjct: 95  ------IIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRV--IKSFLYQLINGVN 146
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
           + H  R +H DLKP+N+LL  S+  + P  K    G      L ++  I +  F      
Sbjct: 147 FCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG------LARAFGIPIRQF------ 194
Query: 244 NQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
              H  I  T  YR PE++LG   +S   D+WS+ CI  E+     LF     ++ L  +
Sbjct: 195 --THEII--TLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI 250
Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
              LG LP+                     WP G  +    K      R K +  +    
Sbjct: 251 FEVLG-LPDDT------------------TWP-GVTALPDWKQSFPKFRGKTLKRVLGAL 290
Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                 DLL  +L  DP +R++A+ AL HP+F
Sbjct: 291 LDDEGLDLLTAMLEMDPVKRISAKNALEHPYF 322

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 40/342 (11%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLA 120
           N++  +++ S +GEG +G V     + T E VAIK +    K  +    + EI +L+H  
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF- 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           K++   +   +Q  + F+  N + I+ E +   L   +          D ++ F  Q L 
Sbjct: 67  KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFIYQTLR 123
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           +V  +H   +IH DLKP N+L+ S+  +K+  +  +       R + +S+A    D    
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA-------RIIDESAA----DNSEP 172
Query: 241 AFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
                  +  V+TR YRAPEV+L    +S   D+WS GCIL EL     +F   +    L
Sbjct: 173 TGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR--LKNMVS 357
            ++   +G                     + L   E   +RE IK++       L+ M  
Sbjct: 233 LLIFGIIGTP----------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP 276
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
               R      DLL  +L +DP++R+TA++AL HP+ +  ++
Sbjct: 277 ----RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   + +++    E+ +++ L         HC  +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 173 LVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 154/342 (45%), Gaps = 40/342 (11%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLA 120
           N++  +++ S +GEG +G V     + T E VAIK +    K  +    + EI +L+H  
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF- 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           K++   +   +Q  + F+  N + I+ E +   L   +          D ++ F  Q L 
Sbjct: 67  KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFIYQTLR 123
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           +V  +H   +IH DLKP N+L+ S+  +K+  +  +       R + +S+A    D    
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA-------RIIDESAA----DNSEP 172
Query: 241 AFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
                  +  V+TR YRAPEV+L    +S   D+WS GCIL EL     +F   +    L
Sbjct: 173 TGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR--LKNMVS 357
            ++   +G                     + L   E   +RE IK++       L+ M  
Sbjct: 233 LLIFGIIGTP----------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP 276
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
               R      DLL  +L +DP++R+TA++AL HP+ +  ++
Sbjct: 277 ----RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   + +++    E+ +++ L         HC  +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 154/344 (44%), Gaps = 64/344 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVRSIRKYRDAAMIEIDVLQH 118
           R + L  +G G +G V   +D + +++VA+K        ++ + R YR     E+ +L+H
Sbjct: 21  RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYR-----ELRLLKH 75
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL-VREFGRQ 177
           L   +  G           +  + + +V   +G  L + +K    C    D  V+    Q
Sbjct: 76  LKHENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVK----CQALSDEHVQFLVYQ 131
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           LL  + Y+H   +IH DLKP N+                         + +   ++++DF
Sbjct: 132 LLRGLKYIHSAGIIHRDLKPSNV------------------------AVNEDCELRILDF 167
Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
           G     ++  +  V+TR YRAPE++L  + ++   D+WSVGCI+ EL  G+ALF   + +
Sbjct: 168 GLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYI 227
Query: 297 EHLA-MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           + L  +ME    P PE + + +S     Y +  S    P+        K +  + R  N 
Sbjct: 228 DQLKRIMEVVGTPSPEVLAKISSEHARTYIQ--SLPPMPQ--------KDLSSIFRGANP 277
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +++          DLL  +L  D  +R++A +AL H +F   ++
Sbjct: 278 LAI----------DLLGRMLVLDSDQRVSAAEALAHAYFSQYHD 311

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 90/342 (26%), Positives = 153/342 (44%), Gaps = 40/342 (11%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLA 120
           N++  +++ S +GEG +G V     + T E VAIK +    K  +    + EI +L+H  
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHF- 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           K++   +   +Q  + F+  N + I+ E +   L   +          D ++ F  Q L 
Sbjct: 67  KHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD---DHIQYFIYQTLR 123
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           +V  +H   +IH DLKP N+L+ S+  +K+  +  +       R + +S+A    D    
Sbjct: 124 AVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLA-------RIIDESAA----DNSEP 172
Query: 241 AFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
                     V+TR YRAPEV+L    +S   D+WS GCIL EL     +F   +    L
Sbjct: 173 TGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQL 232
Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR--LKNMVS 357
            ++   +G                     + L   E   +RE IK++       L+ M  
Sbjct: 233 LLIFGIIGTP----------------HSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFP 276
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
               R      DLL  +L +DP++R+TA++AL HP+ +  ++
Sbjct: 277 ----RVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHD 314

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 72/341 (21%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G+FG V +     + E VAIK V   + +++    E+ +++ L         HC  +
Sbjct: 28  IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR---ELQIMRKL--------DHCNIV 76
Query: 134 R-NWFDYRN-------HICIVFEKLGPSLFDFLK---RNKYCPFPVDLVREFGRQLLESV 182
           R  +F Y +       ++ +V + +  +++   +   R K    PV  V+ +  QL  S+
Sbjct: 77  RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQT-LPVIYVKLYMYQLFRSL 135
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
           AY+H   + H D+KP+N+LL                        P ++ +KL DFGS   
Sbjct: 136 AYIHSFGICHRDIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQ 172
Query: 242 -FDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L
Sbjct: 173 LVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQL 232
Query: 300 AMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             + + LG      IR  +   TE  F +     W +    R   +A+    R       
Sbjct: 233 VEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR------- 285
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                          LL Y P+ RLT  +A  H FF  L +
Sbjct: 286 ---------------LLEYTPTARLTPLEACAHSFFDELRD 311

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 95.9 bits (237), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 152/333 (45%), Gaps = 53/333 (15%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           Y+++ K+G G +  V E  +    E+V +K+++ ++K  +    EI +L++L    +GG 
Sbjct: 39  YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK--NKIKREIKILENL----RGGP 92
Query: 128 SHCVQIRNWFDYRNHI-CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           +         D  +    +VFE +  + F  L    Y       +R +  ++L+++ Y H
Sbjct: 93  NIITLADIVKDPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH 148
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DN 244
            + ++H D+KP N++ +  E  KL                      +LID+G   F    
Sbjct: 149 SMGIMHRDVKPHNVM-IDHEHRKL----------------------RLIDWGLAEFYHPG 185
Query: 245 QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
           Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N + L  +
Sbjct: 186 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 245
Query: 303 ERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
            + LG              +KY      R N   G  SR      K+ +R  +  + H+ 
Sbjct: 246 AKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR------KRWERFVHSENQHL- 292
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 293 -VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 75/370 (20%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 5   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++  V+ H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 62  QNQTHAKRAYRELVLMK--VVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLVGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                               + +K++DFG   TA  +   +  V TR+YRAPEVILG+G+
Sbjct: 163 --------------------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVGCI+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
                N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
             +AL HP+ 
Sbjct: 312 VDEALQHPYI 321

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/351 (26%), Positives = 150/351 (42%), Gaps = 85/351 (24%)
Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
           G +V +     + RYK    +G+G+FG V+ C D+ T +  A+KV+  R +++  D   +
Sbjct: 14  GXFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73
Query: 112 --EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFD-FLKRNKYCPFP 167
             E+ +L+ L         +  ++  +F+ + +  +V E   G  LFD  + R ++    
Sbjct: 74  LREVQLLKQL------DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE-- 125
Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           VD  R   RQ+L  + Y H  +++H DLKPEN+LL S                       
Sbjct: 126 VDAARII-RQVLSGITYXHKNKIVHRDLKPENLLLESK---------------------S 163
Query: 228 KSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           K + I++IDFG ST F+ ++     + T +Y APEV+ G  +   CD+WS G IL  L +
Sbjct: 164 KDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLS 222
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
           G   F      + L  +E+                  KY         P+     ES K 
Sbjct: 223 GCPPFNGANEYDILKKVEKG-----------------KY-----TFELPQWKKVSESAK- 259
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                  DL+   L Y PS R++AR AL+H + + 
Sbjct: 260 -----------------------DLIRKXLTYVPSXRISARDALDHEWIQT 287

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 166/370 (44%), Gaps = 75/370 (20%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 5   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++  V+ H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 62  QNQTHAKRAYRELVLMK--VVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                               + +K++DFG   TA  +   +  V TR+YRAPEVILG+G+
Sbjct: 163 --------------------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVGCI+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
                N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
             +AL HP+ 
Sbjct: 312 VDEALQHPYI 321

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 62/351 (17%)
Query: 58  FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA---MIEID 114
           F++  ++   Y+I+  +G G +G V     R T ++VAIK + +       A   + E+ 
Sbjct: 47  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L+H   ++       ++    +     + +V + +   L   +  ++  P  ++ VR F
Sbjct: 107 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYF 164
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             QLL  + YMH  ++IH DLKP N+L+                         ++  +K+
Sbjct: 165 LYQLLRGLKYMHSAQVIHRDLKPSNLLVN------------------------ENCELKI 200
Query: 235 IDFG-------STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTG 286
            DFG       S A      +  V+TR YRAPE++L L  ++   D+WSVGCI  E+   
Sbjct: 201 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 260
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
             LF     +  L ++   LG     +I+                     AV  E ++A 
Sbjct: 261 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQ---------------------AVGAERVRAY 299
Query: 347 KKLDRLKNMV---SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            +    +  V   +++    R  L+ LL  +LR++PS R++A  AL HPF 
Sbjct: 300 IQSLPPRQPVPWETVYPGADRQALS-LLGRMLRFEPSARISAAAALRHPFL 349

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 145/340 (42%), Gaps = 85/340 (25%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQH 118
            L+ RY+ + K+G G +G VL C D+ T    AIK+++    +      A + E+ VL+ 
Sbjct: 1   GLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQ 60
Query: 119 LAKNDKGGSSHCVQIRNWF-DYRNHICIVFEKLGPSLFD-FLKRNKYCPFPVDLVREFGR 176
           L         + +++  +F D RN+  ++    G  LFD  + R K+      ++    +
Sbjct: 61  L------DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM---K 111
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L    Y+H   ++H DLKPEN+LL S                       + + IK++D
Sbjct: 112 QVLSGTTYLHKHNIVHRDLKPENLLLESK---------------------SRDALIKIVD 150
Query: 237 FGSTA-FD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG +A F+        + T +Y APEV L   +   CD+WS G IL  L  G   F    
Sbjct: 151 FGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG--- 206
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
                       G   + +++R  +G   +       +W + +            D  K 
Sbjct: 207 ------------GQTDQEILKRVEKGKFSF----DPPDWTQVS------------DEAKQ 238
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           +V L               +L Y+PS+R++A +ALNHP+ 
Sbjct: 239 LVKL---------------MLTYEPSKRISAEEALNHPWI 263

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 166/370 (44%), Gaps = 75/370 (20%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V+  +D   +  VAIK +    
Sbjct: 5   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++  V+ H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 62  QNQTHAKRAYRELVLMK--VVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLVGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                               + +K++DFG   TA  +   +  V TR+YRAPEVILG+G+
Sbjct: 163 --------------------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVG I+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
                N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
             +AL HP+ 
Sbjct: 312 VDEALQHPYI 321

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/351 (24%), Positives = 152/351 (43%), Gaps = 62/351 (17%)
Query: 58  FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA---MIEID 114
           F++  ++   Y+I+  +G G +G V     R T ++VAIK + +       A   + E+ 
Sbjct: 46  FDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           +L+H   ++       ++    +     + +V + +   L   +  ++  P  ++ VR F
Sbjct: 106 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYF 163
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             QLL  + YMH  ++IH DLKP N+L                        + ++  +K+
Sbjct: 164 LYQLLRGLKYMHSAQVIHRDLKPSNLL------------------------VNENCELKI 199
Query: 235 IDFG-------STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTG 286
            DFG       S A      +  V+TR YRAPE++L L  ++   D+WSVGCI  E+   
Sbjct: 200 GDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 259
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
             LF     +  L ++   LG     +I+                     AV  E ++A 
Sbjct: 260 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQ---------------------AVGAERVRAY 298
Query: 347 KKLDRLKNMV---SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            +    +  V   +++    R  L+ LL  +LR++PS R++A  AL HPF 
Sbjct: 299 IQSLPPRQPVPWETVYPGADRQALS-LLGRMLRFEPSARISAAAALRHPFL 348

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/341 (25%), Positives = 146/341 (42%), Gaps = 85/341 (24%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQ 117
           + L+ RY+ + K+G G +G VL C D+ T    AIK+++    +      A + E+ VL+
Sbjct: 17  QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 118 HLAKNDKGGSSHCVQIRNWF-DYRNHICIVFEKLGPSLFD-FLKRNKYCPFPVDLVREFG 175
            L         + +++  +F D RN+  ++    G  LFD  + R K+      ++    
Sbjct: 77  QL------DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIM--- 127
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           +Q+L    Y+H   ++H DLKPEN+LL S                       + + IK++
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLLESK---------------------SRDALIKIV 166
Query: 236 DFGSTA-FD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
           DFG +A F+        + T +Y APEV L   +   CD+WS G IL  L  G   F   
Sbjct: 167 DFGLSAHFEVGGKMKERLGTAYYIAPEV-LRKKYDEKCDVWSCGVILYILLCGYPPFG-- 223
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
                        G   + +++R  +G   +       +W + +            D  K
Sbjct: 224 -------------GQTDQEILKRVEKGKFSF----DPPDWTQVS------------DEAK 254
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            +V L               +L Y+PS+R++A +ALNHP+ 
Sbjct: 255 QLVKL---------------MLTYEPSKRISAEEALNHPWI 280

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 34/225 (15%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +GEG+F    +C  +++ +  A+K++   ++       EI  L+        G  + V++
Sbjct: 19  LGEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKEITALKLCE-----GHPNIVKL 71
Query: 134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIH 192
              F  + H  +V E L G  LF+ +K+ K+  F         R+L+ +V++MHD+ ++H
Sbjct: 72  HEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVH 129
Query: 193 TDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHSS 249
            DLKPEN+L                           +  IK+IDFG       DNQ   +
Sbjct: 130 RDLKPENLLFTDEN---------------------DNLEIKIIDFGFARLKPPDNQPLKT 168
Query: 250 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
              T HY APE++   G+   CD+WS+G IL  + +G+  FQ+H+
Sbjct: 169 PCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD 213

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 104/227 (45%), Gaps = 48/227 (21%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 169
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  N   +  V TR+YRAPEVILG+G++   D+WSVGCI+ EL  G  +FQ  +
Sbjct: 170 FGLARTACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTD 229
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
           +++    +   LG P  E M      +R       KY        +P+     ES +   
Sbjct: 230 HIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESER--- 286
Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
             D++K           S   DLL  +L  DP +R++  +AL HP+ 
Sbjct: 287 --DKIKT----------SQARDLLSKMLVIDPDKRISVDEALRHPYI 321

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 75/370 (20%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 5   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 62  QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                               + +K++DFG   TA  +   +  V TR+YRAPEVILG+G+
Sbjct: 163 --------------------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVGCI+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
                N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
             +AL HP+ 
Sbjct: 312 VDEALQHPYI 321

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 75/370 (20%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 5   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++  V+ H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 62  QNQTHAKRAYRELVLMK--VVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLVGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                               + +K++DFG   TA  +   +  V TR+YRAPEVILG+G+
Sbjct: 163 --------------------ATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVG I+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
                N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
             +AL HP+ 
Sbjct: 312 VDEALQHPYI 321

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 75/370 (20%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 6   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 62
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 63  QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 117
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 118 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 163
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                                 +K++DFG   TA  +   +  V TR+YRAPEVILG+G+
Sbjct: 164 --------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 203
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVGCI+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 204 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE 262
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
                N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++
Sbjct: 263 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 312
Query: 385 ARQALNHPFF 394
             +AL HP+ 
Sbjct: 313 VDEALQHPYI 322

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 92.4 bits (228), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 163/369 (44%), Gaps = 73/369 (19%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 5   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 62  QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                                 +K++DFG   TA  +   +  V TR+YRAPEVILG+G+
Sbjct: 163 --------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVGCI+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGA-VSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA 385
                N P+ A  S E +      D L    S H     S   DLL  +L  D S+R++ 
Sbjct: 262 -----NRPKYAGYSFEKLFP----DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISV 312
Query: 386 RQALNHPFF 394
            +AL HP+ 
Sbjct: 313 DEALQHPYI 321

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 163/370 (44%), Gaps = 75/370 (20%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 7   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 63
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 64  QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 118
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 119 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 164
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                                 +K++DFG   TA  +      V TR+YRAPEVILG+G+
Sbjct: 165 --------------------CTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGY 204
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVGCI+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 205 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE 263
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
                N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++
Sbjct: 264 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 313
Query: 385 ARQALNHPFF 394
             +AL HP+ 
Sbjct: 314 VDEALQHPYI 323

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 75/370 (20%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 5   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 62  QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                                 +K++DFG   TA  +   +  V TR+YRAPEVILG+G+
Sbjct: 163 --------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVGCI+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
                N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
             +AL HP+ 
Sbjct: 312 VDEALQHPYI 321

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 164/370 (44%), Gaps = 75/370 (20%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 5   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 62  QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLS 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                                 +K++DFG   TA  +   +  V TR+YRAPEVILG+G+
Sbjct: 163 --------------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVGCI+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
                N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++
Sbjct: 262 -----NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRIS 311
Query: 385 ARQALNHPFF 394
             +AL HP+ 
Sbjct: 312 VDEALQHPYI 321

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 66/346 (19%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
           +Y+ L+K+G+GTFG V +   R+T ++VA+K V        +   A+ EI +LQ L   +
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 124 KGGSSHCVQIRN--WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   + +   +   +  I +VF+     L   L  N    F +  ++   + LL  
Sbjct: 79  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNG 137
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--- 238
           + Y+H  +++H D+K  N+L+                         +   +KL DFG   
Sbjct: 138 LYYIHRNKILHRDMKAANVLIT------------------------RDGVLKLADFGLAR 173
Query: 239 --STAFDNQ--NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
             S A ++Q   + + V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +
Sbjct: 174 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
                LA++ +  G +   +                   WP    + ++ +  +KL+ +K
Sbjct: 234 TEQHQLALISQLCGSITPEV-------------------WP----NVDNYELYEKLELVK 270
Query: 354 NMVSLHVDRARSTL-----TDLLHGLLRYDPSERLTARQALNHPFF 394
                  DR ++ +      DL+  LL  DP++R+ +  ALNH FF
Sbjct: 271 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 91.3 bits (225), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/227 (29%), Positives = 102/227 (44%), Gaps = 48/227 (21%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 167
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  N   +  V TR+YRAPEVILG+G+    D+WSVGCI+ EL  G  +FQ  +
Sbjct: 168 FGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTD 227
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
           +++    +   LG P  E M      +R        Y        +P+     ES +   
Sbjct: 228 HIDQWNKVIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESER--- 284
Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
             D++K           S   DLL  +L  DP +R++  +AL HP+ 
Sbjct: 285 --DKIKT----------SQARDLLSKMLVIDPDKRISVDEALRHPYI 319

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 91.3 bits (225), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 66/346 (19%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
           +Y+ L+K+G+GTFG V +   R+T ++VA+K V        +   A+ EI +LQ L   +
Sbjct: 18  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 124 KGGSSHCVQIRN--WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   + +   +   +  I +VF+     L   L  N    F +  ++   + LL  
Sbjct: 78  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNG 136
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--- 238
           + Y+H  +++H D+K  N+L+                         +   +KL DFG   
Sbjct: 137 LYYIHRNKILHRDMKAANVLIT------------------------RDGVLKLADFGLAR 172
Query: 239 --STAFDNQ--NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
             S A ++Q   + + V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +
Sbjct: 173 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 232
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
                LA++ +  G +   +                   WP    + ++ +  +KL+ +K
Sbjct: 233 TEQHQLALISQLCGSITPEV-------------------WP----NVDNYELYEKLELVK 269
Query: 354 NMVSLHVDRARSTL-----TDLLHGLLRYDPSERLTARQALNHPFF 394
                  DR ++ +      DL+  LL  DP++R+ +  ALNH FF
Sbjct: 270 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 315

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 91.3 bits (225), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 66/346 (19%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
           +Y+ L+K+G+GTFG V +   R+T ++VA+K V        +   A+ EI +LQ L   +
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 124 KGGSSHCVQIRN--WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   + +   +   +  I +VF+     L   L  N    F +  ++   + LL  
Sbjct: 79  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNG 137
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--- 238
           + Y+H  +++H D+K  N+L+                         +   +KL DFG   
Sbjct: 138 LYYIHRNKILHRDMKAANVLIT------------------------RDGVLKLADFGLAR 173
Query: 239 --STAFDNQ--NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
             S A ++Q   + + V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +
Sbjct: 174 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
                LA++ +  G +   +                   WP    + ++ +  +KL+ +K
Sbjct: 234 TEQHQLALISQLCGSITPEV-------------------WP----NVDNYELYEKLELVK 270
Query: 354 NMVSLHVDRARSTL-----TDLLHGLLRYDPSERLTARQALNHPFF 394
                  DR ++ +      DL+  LL  DP++R+ +  ALNH FF
Sbjct: 271 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 91.3 bits (225), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 99/369 (26%), Positives = 163/369 (44%), Gaps = 73/369 (19%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 5   KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 61
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 62  QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 116
Query: 156 DFLK------RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
             ++      R  Y  +          Q+L  + ++H   +IH DLKP NI++ S     
Sbjct: 117 QVIQMELDHERMSYLLY----------QMLCGIKHLHSAGIIHRDLKPSNIVVKSD---- 162
Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGW 267
                                 +K++DFG   TA  +   +  V TR+YRAPEVILG+G+
Sbjct: 163 --------------------CTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGY 202
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
               D+WSVGCI+ E+  G  LF   ++++    +   LG P PE M ++       Y  
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE 261
Query: 327 RGSRLNWPEGA-VSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA 385
                N P+ A  S E +      D L    S H     S   DLL  +L  D S+R++ 
Sbjct: 262 -----NRPKYAGYSFEKLFP----DVLFPADSEHNALKASQARDLLSKMLVIDASKRISV 312
Query: 386 RQALNHPFF 394
            +AL HP+ 
Sbjct: 313 DEALQHPYI 321

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/346 (24%), Positives = 151/346 (43%), Gaps = 66/346 (19%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKND 123
           +Y+ L+K+G+GTFG V +   R+T ++VA+K V        +   A+ EI +LQ L   +
Sbjct: 19  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 124 KGGSSHCVQIRN--WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   + +   +   +  I +VF+     L   L  N    F +  ++   + LL  
Sbjct: 79  VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLS-NVLVKFTLSEIKRVMQMLLNG 137
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--- 238
           + Y+H  +++H D+K  N+L+                         +   +KL DFG   
Sbjct: 138 LYYIHRNKILHRDMKAANVLIT------------------------RDGVLKLADFGLAR 173
Query: 239 --STAFDNQ--NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
             S A ++Q   + + V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +
Sbjct: 174 AFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 233
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
                LA++ +  G +   +                   WP    + ++ +  +KL+ +K
Sbjct: 234 TEQHQLALISQLCGSITPEV-------------------WP----NVDNYELYEKLELVK 270
Query: 354 NMVSLHVDRARSTL-----TDLLHGLLRYDPSERLTARQALNHPFF 394
                  DR ++ +      DL+  LL  DP++R+ +  ALNH FF
Sbjct: 271 GQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFF 316

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 161/363 (44%), Gaps = 61/363 (16%)
Query: 47  RRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---- 99
           +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +    
Sbjct: 10  KRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPF 66
Query: 100 ----RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
                + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E +  +L 
Sbjct: 67  QNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLC 121
Query: 156 DFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR 215
             ++         + +     Q+L  + ++H   +IH DLKP NI++ S           
Sbjct: 122 QVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD---------- 167
Query: 216 SSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDM 273
                           +K++DFG   TA  +   +  V TR+YRAPEVILG+G+    D+
Sbjct: 168 --------------CTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDL 213
Query: 274 WSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLN 332
           WSVGCI+ E+   + LF   + ++    +   LG P PE M ++       Y       N
Sbjct: 214 WSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE-----N 267
Query: 333 WPEGA-VSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
            P+ A  S E +      D L    S H     S   DLL  +L  D S+R++  +AL H
Sbjct: 268 RPKYAGYSFEKLFP----DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 323
Query: 392 PFF 394
           P+ 
Sbjct: 324 PYI 326

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/340 (27%), Positives = 150/340 (44%), Gaps = 55/340 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--------RSIRKYRDAAMIEIDVLQH 118
           RY+ L  +G G  G V   +D   +  VAIK +         + R YR+  +++   + H
Sbjct: 19  RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK--CVNH 76
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
             KN  G  +     ++  ++++ + IV E +  +L   ++         + +     Q+
Sbjct: 77  --KNIIGLLNVFTPQKSLEEFQD-VYIVMELMDANLCQVIQME----LDHERMSYLLYQM 129
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  + ++H   +IH DLKP NI++ S                           +K++DFG
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILDFG 165
Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
              TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + +
Sbjct: 166 LARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYI 225
Query: 297 EHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGA-VSRESIKAVKKLDRLKN 354
           +    +   LG P PE M ++       Y       N P+ A  S E +      D L  
Sbjct: 226 DQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE-----NRPKYAGYSFEKLFP----DVLFP 275
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
             S H     S   DLL  +L  D S+R++  +AL HP+ 
Sbjct: 276 ADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYI 315

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score = 89.0 bits (219), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 42/288 (14%)
Query: 20  SEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSK---MGE 76
           S A+    + V  +  +A A    +PP   D    H +    +     +  +SK   +G 
Sbjct: 44  SNADLTERMPVKSKRTSALAVDIPAPPAPFD----HRIVTAKQGAVNSFYTVSKTEILGG 99
Query: 77  GTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKGGSSHCVQIR 134
           G FG+V +C +  T  ++A K++++ R  +D   +  EI V+  L        ++ +Q+ 
Sbjct: 100 GRFGQVHKCEETATGLKLAAKIIKT-RGMKDKEEVKNEISVMNQL------DHANLIQLY 152
Query: 135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHT 193
           + F+ +N I +V E + G  LFD +    Y    +D +  F +Q+ E + +MH + ++H 
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTIL-FMKQICEGIRHMHQMYILHL 211
Query: 194 DLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI-V 251
           DLKPENIL V+ +                      +  IK+IDFG +  +  +    +  
Sbjct: 212 DLKPENILCVNRD----------------------AKQIKIIDFGLARRYKPREKLKVNF 249
Query: 252 STRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
            T  + APEV+     S+P DMWSVG I   L +G + F    + E L
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETL 297

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 171/373 (45%), Gaps = 65/373 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEID-VLQHLAKNDKG 125
           RY+I   +G G++G V E +D+  +  VAIK +  +R + D  +I+   +L+ +A  ++ 
Sbjct: 54  RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKI--LRVFED--LIDCKRILREIAILNRL 109
Query: 126 GSSHCVQIRNWF-----DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL----VREFGR 176
              H V++ +       +  + + +V E +  S F  L R      PV L    ++    
Sbjct: 110 NHDHVVKVLDIVIPKDVEKFDELYVVLE-IADSDFKKLFRT-----PVYLTELHIKTLLY 163
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------PGYKRSSSGEMPFRCLPK 228
            LL  V Y+H   ++H DLKP N L+     +K+          Y  + + ++P    P+
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPIS--PR 221
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGE 287
              + L+ F  T    +  +  V TR YRAPE+IL    ++   D+WS+GCI  EL    
Sbjct: 222 EDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL---- 277
Query: 288 ALFQTHENLEHLAMMERALGPL-------PEHMIRRASRGTEKYFRRGSR--LNWP---E 335
            L    EN+ + A      GPL       P    ++A     K+  RG+R  LN      
Sbjct: 278 -LNMIKENVAYHA----DRGPLFPGSSCFPLSPDQKAGNDF-KFHTRGNRDQLNVIFNIL 331
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD-----------LLHGLLRYDPSERLT 384
           G  S E I+A++K D  K  + +   R  + L +           LL  +L ++P++R+T
Sbjct: 332 GTPSEEDIEALEKED-AKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRIT 390
Query: 385 ARQALNHPFFRNL 397
             + L HPFF+ +
Sbjct: 391 INECLAHPFFKEV 403

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 88.6 bits (218), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 144/348 (41%), Gaps = 71/348 (20%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDA--AMIEIDVLQHLAKND 123
           RY+ L  +G G  G V   +D      VAIK + R  +    A  A  E+ +++ +   +
Sbjct: 25  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLK------RNKYCPFPVDLVREFGRQ 177
                +    +   +    + +V E +  +L   ++      R  Y  +          Q
Sbjct: 85  IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY----------Q 134
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +L  + ++H   +IH DLKP NI++ S                           +K++DF
Sbjct: 135 MLXGIKHLHSAGIIHRDLKPSNIVVKSD------------------------XTLKILDF 170
Query: 238 G--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           G   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + 
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
Query: 296 LEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
           ++    +   LG P PE M      +R       KY    + L +P             K
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP-------------K 273
Query: 349 L--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           L  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 143/365 (39%), Gaps = 105/365 (28%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--------RSIRKYRDAAMIEIDVLQH 118
           RY+ L  +G G  G V   +D      VAIK +         + R YR+  +++      
Sbjct: 25  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 78
Query: 119 LAKNDKGGSSHCVQIRNWFDYRN------------HICIVFEKLGPSLFDFLK------R 160
                      CV  +N     N             + +V E +  +L   ++      R
Sbjct: 79  -----------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER 127
Query: 161 NKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE 220
             Y  +          Q+L  + ++H   +IH DLKP NI++ S                
Sbjct: 128 MSYLLY----------QMLXGIKHLHSAGIIHRDLKPSNIVVKSD--------------- 162
Query: 221 MPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGC 278
                      +K++DFG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGC
Sbjct: 163 ---------XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 279 ILVELCTGEALFQTHENLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRL 331
           I+ E+   + LF   + ++    +   LG P PE M      +R       KY    + L
Sbjct: 214 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGL 269
Query: 332 NWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL 389
            +P             KL  D L    S H     S   DLL  +L  DP++R++   AL
Sbjct: 270 TFP-------------KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 316
Query: 390 NHPFF 394
            HP+ 
Sbjct: 317 QHPYI 321

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 88.2 bits (217), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 94/365 (25%), Positives = 143/365 (39%), Gaps = 105/365 (28%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--------RSIRKYRDAAMIEIDVLQH 118
           RY+ L  +G G  G V   +D      VAIK +         + R YR+  +++      
Sbjct: 18  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK------ 71
Query: 119 LAKNDKGGSSHCVQIRNWFDYRN------------HICIVFEKLGPSLFDFLK------R 160
                      CV  +N     N             + +V E +  +L   ++      R
Sbjct: 72  -----------CVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHER 120
Query: 161 NKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE 220
             Y  +          Q+L  + ++H   +IH DLKP NI++ S                
Sbjct: 121 MSYLLY----------QMLXGIKHLHSAGIIHRDLKPSNIVVKSD--------------- 155
Query: 221 MPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGC 278
                      +K++DFG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGC
Sbjct: 156 ---------XTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGC 206
Query: 279 ILVELCTGEALFQTHENLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRL 331
           I+ E+   + LF   + ++    +   LG P PE M      +R       KY    + L
Sbjct: 207 IMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGL 262
Query: 332 NWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL 389
            +P             KL  D L    S H     S   DLL  +L  DP++R++   AL
Sbjct: 263 TFP-------------KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDAL 309
Query: 390 NHPFF 394
            HP+ 
Sbjct: 310 QHPYI 314

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 163/368 (44%), Gaps = 63/368 (17%)
Query: 43  VSPPRRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV 99
           +S  +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +
Sbjct: 1   MSRSKRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL 57
Query: 100 --------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG 151
                    + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E + 
Sbjct: 58  SRPFQNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMD 112
Query: 152 PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP 211
            +L   ++         + +     Q+L  + ++H   +IH DLKP NI++ S       
Sbjct: 113 ANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD------ 162
Query: 212 GYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSY 269
                               +K++DFG   TA  +      V TR+YRAPEVILG+G+  
Sbjct: 163 ------------------CTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 270 PCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRG 328
             D+WSVGCI+ E+   + LF   + ++    +   LG P PE M ++       Y    
Sbjct: 205 NVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFM-KKLQPTVRTYVE-- 261
Query: 329 SRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTAR 386
              N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++  
Sbjct: 262 ---NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 387 QALNHPFF 394
           +AL HP+ 
Sbjct: 314 EALQHPYI 321

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 87.8 bits (216), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 155/389 (39%), Gaps = 97/389 (24%)
Query: 40  AKHVSPPRRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAI 96
           AKH +  +   D +  Y   +G++   +  RY+ L  +G G  G V   +D      VAI
Sbjct: 34  AKHYNMSKSKVDNQ-FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI 92
Query: 97  KVV--------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN------- 141
           K +         + R YR+  +++                 CV  +N     N       
Sbjct: 93  KKLSRPFQNQTHAKRAYRELVLMK-----------------CVNHKNIISLLNVFTPQKT 135
Query: 142 -----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
                 + +V E +  +L   ++         + +     Q+L  + ++H   +IH DLK
Sbjct: 136 LEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 191
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTR 254
           P NI++ S                           +K++DFG   TA  +   +  V TR
Sbjct: 192 PSNIVVKSD------------------------CTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 255 HYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHM 313
           +YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    +   LG P PE M
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 287
Query: 314 ------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARS 365
                 +R       KY    + L +P             KL  D L    S H     S
Sbjct: 288 KKLQPTVRNYVENRPKY----AGLTFP-------------KLFPDSLFPADSEHNKLKAS 330
Query: 366 TLTDLLHGLLRYDPSERLTARQALNHPFF 394
              DLL  +L  DP++R++   AL HP+ 
Sbjct: 331 QARDLLSKMLVIDPAKRISVDDALQHPYI 359

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 155/389 (39%), Gaps = 97/389 (24%)
Query: 40  AKHVSPPRRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAI 96
           AKH +  +   D +  Y   +G++   +  RY+ L  +G G  G V   +D      VAI
Sbjct: 34  AKHYNMSKSKVDNQ-FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAI 92
Query: 97  KVV--------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN------- 141
           K +         + R YR+  +++                 CV  +N     N       
Sbjct: 93  KKLSRPFQNQTHAKRAYRELVLMK-----------------CVNHKNIISLLNVFTPQKT 135
Query: 142 -----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
                 + +V E +  +L   ++         + +     Q+L  + ++H   +IH DLK
Sbjct: 136 LEEFQDVYLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLK 191
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTR 254
           P NI++ S                           +K++DFG   TA  +   +  V TR
Sbjct: 192 PSNIVVKSD------------------------CTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 255 HYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHM 313
           +YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    +   LG P PE M
Sbjct: 228 YYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM 287
Query: 314 ------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARS 365
                 +R       KY    + L +P             KL  D L    S H     S
Sbjct: 288 KKLQPTVRNYVENRPKY----AGLTFP-------------KLFPDSLFPADSEHNKLKAS 330
Query: 366 TLTDLLHGLLRYDPSERLTARQALNHPFF 394
              DLL  +L  DP++R++   AL HP+ 
Sbjct: 331 QARDLLSKMLVIDPAKRISVDDALQHPYI 359

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 170
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   +
Sbjct: 171 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 230
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            ++    +   LG P PE M      +R       KY    + L +P             
Sbjct: 231 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 273
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           KL  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 274 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 169
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   +
Sbjct: 170 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            ++    +   LG P PE M      +R       KY    + L +P             
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 272
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           KL  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 169
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   +
Sbjct: 170 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            ++    +   LG P PE M      +R       KY    + L +P             
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 272
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           KL  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 163
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   +
Sbjct: 164 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 223
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            ++    +   LG P PE M      +R       KY    + L +P             
Sbjct: 224 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 266
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           KL  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 267 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 170
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   +
Sbjct: 171 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 230
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            ++    +   LG P PE M      +R       KY    + L +P             
Sbjct: 231 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 273
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           KL  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 274 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 322

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 163
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   +
Sbjct: 164 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 223
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            ++    +   LG P PE M      +R       KY    + L +P             
Sbjct: 224 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 266
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           KL  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 267 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 315

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 168
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   +
Sbjct: 169 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 228
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            ++    +   LG P PE M      +R       KY    + L +P             
Sbjct: 229 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 271
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           KL  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 272 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 320

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------XTLKILD 169
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   +
Sbjct: 170 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 229
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            ++    +   LG P PE M      +R       KY    + L +P             
Sbjct: 230 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 272
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           KL  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 273 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 144/348 (41%), Gaps = 71/348 (20%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDA--AMIEIDVLQHLAKND 123
           RY+ L  +G G  G V   +D      VAIK + R  +    A  A  E+ +++ +   +
Sbjct: 25  RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKN 84
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLK------RNKYCPFPVDLVREFGRQ 177
                +    +   +    + +V E +  +L   ++      R  Y  +          Q
Sbjct: 85  IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLY----------Q 134
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +L  + ++H   +IH DLKP NI++ S                           +K++DF
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------XTLKILDF 170
Query: 238 G--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           G   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + 
Sbjct: 171 GLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDY 230
Query: 296 LEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
           ++    +   LG P PE M      +R       KY    + L +P             K
Sbjct: 231 IDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP-------------K 273
Query: 349 L--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           L  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 274 LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 321

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 102/229 (44%), Gaps = 52/229 (22%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L  + ++H   +IH DLKP NI++ S                           +K++D
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSD------------------------CTLKILD 162
Query: 237 FG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           FG   TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   +
Sbjct: 163 FGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRD 222
Query: 295 NLEHLAMMERALG-PLPEHM------IRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            ++    +   LG P PE M      +R       KY    + L +P             
Sbjct: 223 YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKY----AGLTFP------------- 265
Query: 348 KL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           KL  D L    S H     S   DLL  +L  DP++R++   AL HP+ 
Sbjct: 266 KLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYI 314

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score = 85.9 bits (211), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 143/341 (41%), Gaps = 88/341 (25%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQ------HLAK 121
           Y++   +G+G F  V  C +R+T ++ A+K+V  + K+  +  +  + L+      H+ K
Sbjct: 26  YELCEVIGKGAFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSL-FDFLKR-NKYCPFPVDLVREFGRQL 178
           +      H V++   +     + +VFE + G  L F+ +KR +    +   +   + RQ+
Sbjct: 85  H-----PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           LE++ Y HD  +IH D+KPEN+LL S E                      S+ +KL DFG
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKE---------------------NSAPVKLGDFG 178
Query: 239 STAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG-EALFQTHE 294
                 ++       V T H+ APEV+    +  P D+W  G IL  L +G    + T E
Sbjct: 179 VAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
            L                         E   +   ++N  + +   ES K          
Sbjct: 239 RL------------------------FEGIIKGKYKMNPRQWSHISESAK---------- 264
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                         DL+  +L  DP+ER+T  +ALNHP+ +
Sbjct: 265 --------------DLVRRMLMLDPAERITVYEALNHPWLK 291

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 133/329 (40%), Gaps = 78/329 (23%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G  G+VLEC+ R+T ++ A+K++    K R     E+D   H   +   G  H V I
Sbjct: 18  LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVD--HHWQAS---GGPHIVCI 68
Query: 134 RNWFDYRNH----ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            + ++  +H    + I+ E + G  LF  ++      F      E  R +  ++ ++H  
Sbjct: 69  LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 128
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH- 247
            + H D+KPEN+L  S E                     K + +KL DFG      QN  
Sbjct: 129 NIAHRDVKPENLLYTSKE---------------------KDAVLKLTDFGFAKETTQNAL 167
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG 307
            +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++          +A+ 
Sbjct: 168 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAIS 219
Query: 308 PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL 367
           P  +  IR    G             PE +   E  K + +L                  
Sbjct: 220 PGMKRRIRLGQYGFPN----------PEWSEVSEDAKQLIRL------------------ 251
Query: 368 TDLLHGLLRYDPSERLTARQALNHPFFRN 396
                 LL+ DP+ERLT  Q +NHP+   
Sbjct: 252 ------LLKTDPTERLTITQFMNHPWINQ 274

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 85.9 bits (211), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 162/368 (44%), Gaps = 63/368 (17%)
Query: 43  VSPPRRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV 99
           +S  +RD++    Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK +
Sbjct: 1   MSRSKRDNN---FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKL 57
Query: 100 --------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG 151
                    + R YR+  +++   + H  KN  G  +     ++  ++++ + IV E + 
Sbjct: 58  SRPFQNQTHAKRAYRELVLMK--CVNH--KNIIGLLNVFTPQKSLEEFQD-VYIVMELMD 112
Query: 152 PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP 211
            +L   ++         + +     Q+L  + ++H   +IH DLKP NI++ S       
Sbjct: 113 ANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD------ 162
Query: 212 GYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSY 269
                               +K++DFG   TA  +      V TR+YRAPEVILG+G+  
Sbjct: 163 ------------------CTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKE 204
Query: 270 PCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRG 328
             D+WSVGCI+ E+   + LF   + ++    +   LG P P  M ++       Y    
Sbjct: 205 NVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPAFM-KKLQPTVRNYVE-- 261
Query: 329 SRLNWPEGAVSRESIKAVKKL--DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTAR 386
              N P+ A       + +KL  D L    S H     S   DLL  +L  D S+R++  
Sbjct: 262 ---NRPKYAGY-----SFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVD 313
Query: 387 QALNHPFF 394
           +AL HP+ 
Sbjct: 314 EALQHPYI 321

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score = 85.5 bits (210), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 133/329 (40%), Gaps = 78/329 (23%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G  G+VLEC+ R+T ++ A+K++    K R     E+D   H   +   G  H V I
Sbjct: 37  LGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQ----EVD--HHWQAS---GGPHIVCI 87
Query: 134 RNWFDYRNH----ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            + ++  +H    + I+ E + G  LF  ++      F      E  R +  ++ ++H  
Sbjct: 88  LDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH 147
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH- 247
            + H D+KPEN+L  S E                     K + +KL DFG      QN  
Sbjct: 148 NIAHRDVKPENLLYTSKE---------------------KDAVLKLTDFGFAKETTQNAL 186
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG 307
            +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++          +A+ 
Sbjct: 187 QTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTG--------QAIS 238
Query: 308 PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL 367
           P  +  IR    G             PE +   E  K + +L                  
Sbjct: 239 PGMKRRIRLGQYGFPN----------PEWSEVSEDAKQLIRL------------------ 270
Query: 368 TDLLHGLLRYDPSERLTARQALNHPFFRN 396
                 LL+ DP+ERLT  Q +NHP+   
Sbjct: 271 ------LLKTDPTERLTITQFMNHPWINQ 293

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score = 85.1 bits (209), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 69  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 119
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 120 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 179
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 180 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 217
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 218 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 275
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 276 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 306
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 307 ------------LIRNLLKTEPTQRMTITEFMNHPWI 331

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 63  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 113
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 173
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 211
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 212 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 269
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 270 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 300
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 301 ------------LIRNLLKTEPTQRMTITEFMNHPWI 325

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 69
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 70  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 167
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 168 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 225
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 226 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 256
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 257 ------------LIRNLLKTEPTQRMTITEFMNHPWI 281

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score = 84.7 bits (208), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 33  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 83
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 84  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 143
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 144 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 181
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 182 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 239
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 240 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 270
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 271 ------------LIRNLLKTEPTQRMTITEFMNHPWI 295

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score = 84.3 bits (207), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 17  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 67
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 68  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 165
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 166 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 223
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 224 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 254
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 255 ------------LIRNLLKTEPTQRMTITEFMNHPWI 279

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 18  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 68
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 69  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 128
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 129 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 166
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 167 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 224
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 225 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 255
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 256 ------------LIRNLLKTEPTQRMTITEFMNHPWI 280

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 24  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 74
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 75  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 135 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 172
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 173 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 230
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 231 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 261
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 262 ------------LIRNLLKTEPTQRMTITEFMNHPWI 286

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 25  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 75
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 76  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 136 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 173
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 174 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 231
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 232 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 262
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 263 ------------LIRNLLKTEPTQRMTITEFMNHPWI 287

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 69
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 70  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 167
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 168 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 225
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 226 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 256
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 257 ------------LIRNLLKTEPTQRMTITEFMNHPWI 281

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 143/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 23  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 73
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 74  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 134 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 171
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 172 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 229
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 230 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 260
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 261 ------------LIRNLLKTEPTQRMTITEFMNHPWI 285

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/337 (25%), Positives = 142/337 (42%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 17  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 67
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 68  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 127
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 128 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 165
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+     T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 166 KETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL-- 223
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 224 ------AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM------------ 254
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 255 ------------LIRNLLKTEPTQRMTITEFMNHPWI 279

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 146/356 (41%), Gaps = 74/356 (20%)
Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAMIEIDVLQHL 119
           G +L  RY  L  +G G  G V    D    +RVAIK +V +  +    A+ EI +++ L
Sbjct: 6   GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL 65
Query: 120 AKND---------KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL 170
             ++           GS     + +  +  N + IV E +   L + L++    P   + 
Sbjct: 66  DHDNIVKVFEILGPSGSQLTDDVGSLTEL-NSVYIVQEYMETDLANVLEQG---PLLEEH 121
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
            R F  QLL  + Y+H   ++H DLKP N+ + + + +                      
Sbjct: 122 ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV---------------------- 159
Query: 231 AIKLIDFG-----STAFDNQNH-SSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVEL 283
            +K+ DFG        + ++ H S  + T+ YR+P ++L    ++   DMW+ GCI  E+
Sbjct: 160 -LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEM 218
Query: 284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSR-----LNWPEGAV 338
            TG+ LF     LE + ++  ++  + E   +        Y R         L      +
Sbjct: 219 LTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGI 278
Query: 339 SRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           SRE++                         D L  +L + P +RLTA +AL+HP+ 
Sbjct: 279 SREAV-------------------------DFLEQILTFSPMDRLTAEEALSHPYM 309

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70  ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
           I+SK +G G  G V   ++R+T ++VAIK++ S RK+        D A+    EI++L+ 
Sbjct: 19  IMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKK 77
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           L           ++I+N+FD  ++  ++    G  LFD +  NK         + +  Q+
Sbjct: 78  L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 129
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L +V Y+H+  +IH DLKPEN+LL S E                     +   IK+ DFG
Sbjct: 130 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 168
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
            +    +     ++  T  Y APEV++ +   G++   D WS+G IL    +G   F  H
Sbjct: 169 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 228
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
                                 R     +     G     PE    VS +++  VKK   
Sbjct: 229 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 263
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                 LL  DP  R T  +AL HP+ ++
Sbjct: 264 ----------------------LLVVDPKARFTTEEALRHPWLQD 286

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70  ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
           I+SK +G G  G V   ++R+T ++VAIK++ S RK+        D A+    EI++L+ 
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           L           ++I+N+FD  ++  ++    G  LFD +  NK         + +  Q+
Sbjct: 72  L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L +V Y+H+  +IH DLKPEN+LL S E                     +   IK+ DFG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 162
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
            +    +     ++  T  Y APEV++ +   G++   D WS+G IL    +G   F  H
Sbjct: 163 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
                                 R     +     G     PE    VS +++  VKK   
Sbjct: 223 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 257
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                 LL  DP  R T  +AL HP+ ++
Sbjct: 258 ----------------------LLVVDPKARFTTEEALRHPWLQD 280

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70  ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
           I+SK +G G  G V   ++R+T ++VAIK++ S RK+        D A+    EI++L+ 
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           L           ++I+N+FD  ++  ++    G  LFD +  NK         + +  Q+
Sbjct: 72  L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L +V Y+H+  +IH DLKPEN+LL S E                     +   IK+ DFG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 162
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
            +    +     ++  T  Y APEV++ +   G++   D WS+G IL    +G   F  H
Sbjct: 163 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
                                 R     +     G     PE    VS +++  VKK   
Sbjct: 223 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 257
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                 LL  DP  R T  +AL HP+ ++
Sbjct: 258 ----------------------LLVVDPKARFTTEEALRHPWLQD 280

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70  ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
           I+SK +G G  G V   ++R+T ++VAIK++ S RK+        D A+    EI++L+ 
Sbjct: 12  IMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKK 70
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           L           ++I+N+FD  ++  ++    G  LFD +  NK         + +  Q+
Sbjct: 71  L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L +V Y+H+  +IH DLKPEN+LL S E                     +   IK+ DFG
Sbjct: 123 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 161
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
            +    +     ++  T  Y APEV++ +   G++   D WS+G IL    +G   F  H
Sbjct: 162 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 221
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
                                 R     +     G     PE    VS +++  VKK   
Sbjct: 222 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 256
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                 LL  DP  R T  +AL HP+ ++
Sbjct: 257 ----------------------LLVVDPKARFTTEEALRHPWLQD 279

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70  ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
           I+SK +G G  G V   ++R+T ++VAIK++ S RK+        D A+    EI++L+ 
Sbjct: 13  IMSKTLGSGACGEVKLAFERKTCKKVAIKII-SKRKFAIGSAREADPALNVETEIEILKK 71
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           L           ++I+N+FD  ++  ++    G  LFD +  NK         + +  Q+
Sbjct: 72  L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L +V Y+H+  +IH DLKPEN+LL S E                     +   IK+ DFG
Sbjct: 124 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 162
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
            +    +     ++  T  Y APEV++ +   G++   D WS+G IL    +G   F  H
Sbjct: 163 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 222
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
                                 R     +     G     PE    VS +++  VKK   
Sbjct: 223 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 257
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                 LL  DP  R T  +AL HP+ ++
Sbjct: 258 ----------------------LLVVDPKARFTTEEALRHPWLQD 280

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score = 83.2 bits (204), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 66  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 117
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 157
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 158 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 66  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 117
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 157
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 158 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 217 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 253

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQH------PNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQH------PNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 138/338 (40%), Gaps = 84/338 (24%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHL 119
           + L+  +++ S++G G    V  C  + TQ+  A+KV   ++K  D  ++  EI VL  L
Sbjct: 49  DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKV---LKKTVDKKIVRTEIGVLLRL 105
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           +        + ++++  F+    I +V E + G  LFD +    Y  +      +  +Q+
Sbjct: 106 SH------PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQI 157
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           LE+VAY+H+  ++H DLKPEN+L  +                         + +K+ DFG
Sbjct: 158 LEAVAYLHENGIVHRDLKPENLLYATPA---------------------PDAPLKIADFG 196
Query: 239 -STAFDNQN-HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI-LVELCTGEALFQTHEN 295
            S   ++Q    ++  T  Y APE++ G  +    DMWSVG I  + LC  E  +     
Sbjct: 197 LSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD---- 252
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
                                  RG +  FRR     +                      
Sbjct: 253 ----------------------ERGDQFMFRRILNCEY--------------------YF 270
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
           +S   D       DL+  L+  DP +RLT  QAL HP+
Sbjct: 271 ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 87/359 (24%), Positives = 138/359 (38%), Gaps = 97/359 (27%)
Query: 55  HYVFNLGENLTPR------------YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--- 99
           +YVF++ +   P+            Y I  ++G G FG V    +R T    A K V   
Sbjct: 28  NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 87
Query: 100 -RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
             S ++     +  + VL+H            V + + F+  N + +++E + G  LF+ 
Sbjct: 88  HESDKETVRKEIQTMSVLRHPT---------LVNLHDAFEDDNEMVMIYEFMSGGELFEK 138
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS 217
           +  +++     D   E+ RQ+ + + +MH+   +H DLKPENI+  +             
Sbjct: 139 VA-DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK------------ 185
Query: 218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVS--TRHYRAPEVILGLGWSYPCDMWS 275
                     +S+ +KLIDFG TA  +   S  V+  T  + APEV  G    Y  DMWS
Sbjct: 186 ----------RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWS 235
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
           VG +   L +G + F                                             
Sbjct: 236 VGVLSYILLSGLSPFG-------------------------------------------- 251
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           G    E+++ VK  D   NM             D +  LL  DP+ R+T  QAL HP+ 
Sbjct: 252 GENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWL 308

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 139/363 (38%), Gaps = 97/363 (26%)
Query: 55  HYVFNLGENLTPR------------YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--- 99
           +YVF++ +   P+            Y I  ++G G FG V    +R T    A K V   
Sbjct: 134 NYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTP 193
Query: 100 -RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
             S ++     +  + VL+H            V + + F+  N + +++E + G  LF+ 
Sbjct: 194 HESDKETVRKEIQTMSVLRHPT---------LVNLHDAFEDDNEMVMIYEFMSGGELFEK 244
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS 217
           +  +++     D   E+ RQ+ + + +MH+   +H DLKPENI+  +             
Sbjct: 245 VA-DEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTK------------ 291
Query: 218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVS--TRHYRAPEVILGLGWSYPCDMWS 275
                     +S+ +KLIDFG TA  +   S  V+  T  + APEV  G    Y  DMWS
Sbjct: 292 ----------RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWS 341
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
           VG +   L +G + F                                             
Sbjct: 342 VGVLSYILLSGLSPFG-------------------------------------------- 357
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
           G    E+++ VK  D   NM             D +  LL  DP+ R+T  QAL HP+  
Sbjct: 358 GENDDETLRNVKSCDW--NMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415
Query: 396 NLN 398
             N
Sbjct: 416 PGN 418

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 117/277 (42%), Gaps = 40/277 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 67  ILKEIQ------HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE--SLTEEEATE 118
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+                    R +PK   IK
Sbjct: 119 FLKQILNGVYYLHSLQIAHFDLKPENIMLLD-------------------RNVPKPR-IK 158
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           +IDFG      F N+   +I  T  + APE++         DMWS+G I   L +G + F
Sbjct: 159 IIDFGLAHKIDFGNE-FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                 E LA +        +      S   + + RR
Sbjct: 218 LGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRR 254

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N+L +  E  KL                    
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVL-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 136/361 (37%), Gaps = 100/361 (27%)
Query: 55  HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV----------RSIRK 104
           H      EN  P+      +G G    V  C  + T +  A+K++            +++
Sbjct: 10  HSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQE 65
Query: 105 YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKY 163
            R+A + E+D+L+ ++     G  + +Q+++ ++      +VF+ +    LFD+L     
Sbjct: 66  LREATLKEVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-- 118
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
                   R+  R LLE +  +H L ++H DLKPENIL                      
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL---------------------- 156
Query: 224 RCLPKSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGL------GWSYPCDMWS 275
             L     IKL DFG S   D  +   S+  T  Y APE+I         G+    DMWS
Sbjct: 157 --LDDDMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
            G I+  L  G   F   + +                M+R    G  ++   GS    PE
Sbjct: 215 TGVIMYTLLAGSPPFWHRKQM---------------LMLRMIMSGNYQF---GS----PE 252
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                                    D    T+ DL+   L   P +R TA +AL HPFF+
Sbjct: 253 W------------------------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
Query: 396 N 396
Sbjct: 289 Q 289

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 114/253 (45%), Gaps = 40/253 (15%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAM-IEIDVLQHLAKNDKGGSSH 129
           +G+G F +  E  D  T+E  A KVV     ++ ++   M  EI + + L       + H
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL------DNPH 103
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V    +F+  + + +V E     SL +  KR K    P    R F RQ ++ V Y+H+ 
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNN 161
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
           R+IH DLK  N+ L               + +M          +K+ DFG      FD +
Sbjct: 162 RVIHRDLKLGNLFL---------------NDDM---------DVKIGDFGLATKIEFDGE 197
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
              ++  T +Y APEV+   G S+  D+WS+GCIL  L  G+  F+T    E    +++ 
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 306 LGPLPEHMIRRAS 318
              +P H+   AS
Sbjct: 258 EYSVPRHINPVAS 270

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELC-TG 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 131 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 169
Query: 231 AIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F +  Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 170 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 227
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 228 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 276
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 277 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 107/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F +  Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 170
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 171 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 229 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 277
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 278 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 132 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 170
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 171 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 228
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 229 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 277
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 278 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 138 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 176
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 177 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 234
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 235 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 283
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 284 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 106/229 (46%), Gaps = 42/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R +  ++L+++ Y H + ++H D+KP N++ +  E  KL                    
Sbjct: 133 IRFYMYEILKALDYCHSMGIMHRDVKPHNVM-IDHEHRKL-------------------- 171
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-G 286
             +LID+G   F    Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    
Sbjct: 172 --RLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRK 229
Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
           E  F  H+N + L  + + LG              +KY      R N   G  SR     
Sbjct: 230 EPFFHGHDNYDQLVRIAKVLG------TEDLYDYIDKYNIELDPRFNDILGRHSR----- 278
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            K+ +R  +  + H+        D L  LLRYD   RLTAR+A+ HP+F
Sbjct: 279 -KRWERFVHSENQHL--VSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 43/237 (18%)
Query: 63  NLTPR--YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
           +L P   ++I+ ++G+G FG+V +  +++T    A KV+  +S  +  D  M+EID+L  
Sbjct: 32  DLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILAS 90
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                     + V++ + F Y N++ I+ E       D +      P     ++   +Q 
Sbjct: 91  C------DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 144
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L+++ Y+HD ++IH DLK  NIL        L G                   IKL DFG
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFT------LDG------------------DIKLADFG 180
Query: 239 STAFDN---QNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
            +A +    Q   S + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 181 VSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 119/276 (43%), Gaps = 38/276 (13%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KYRDAAMIEID 114
           E++   Y++  ++G G F  V +C  + T +  A K ++  R         R+    E++
Sbjct: 8   EDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + + + F+ +  + ++ E + G  LFDFL   +      D   +
Sbjct: 68  ILREIR------HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQ 119
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L+ V Y+H  R+ H DLKPENI+L+                    + +P +  IK
Sbjct: 120 FLKQILDGVHYLHSKRIAHFDLKPENIMLLD-------------------KNVP-NPRIK 159
Query: 234 LIDFG-STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
           LIDFG +   +  N   +I  T  + APE++         DMWS+G I   L +G + F 
Sbjct: 160 LIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 219
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
                E L  +        E      S   + + RR
Sbjct: 220 GETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRR 255

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 40/253 (15%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAM-IEIDVLQHLAKNDKGGSSH 129
           +G+G F +  E  D  T+E  A KVV     ++ ++   M  EI + + L       + H
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL------DNPH 103
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V    +F+  + + +V E     SL +  KR K    P    R F RQ ++ V Y+H+ 
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNN 161
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
           R+IH DLK  N+ L               + +M          +K+ DFG      FD +
Sbjct: 162 RVIHRDLKLGNLFL---------------NDDM---------DVKIGDFGLATKIEFDGE 197
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
               +  T +Y APEV+   G S+  D+WS+GCIL  L  G+  F+T    E    +++ 
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 306 LGPLPEHMIRRAS 318
              +P H+   AS
Sbjct: 258 EYSVPRHINPVAS 270

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
           F+Y N+    F+ L P+L D+             +R +  +LL+++ Y H   ++H D+K
Sbjct: 128 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 173
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
           P N++ +  E  KL                      +LID+G   F    + ++  V++R
Sbjct: 174 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 210
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
           +++ PE+++ L  + Y  DMWS+GC+   +    E  F  H+N + L  + + LG     
Sbjct: 211 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 265
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                + G   Y  +      P  E  V R S K       LK M + +         D 
Sbjct: 266 -----TDGLNAYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 315
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
           L  LLRYD  ERLTA +A+ HP+F+ +
Sbjct: 316 LDKLLRYDHQERLTALEAMTHPYFQQV 342

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 80.5 bits (197), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 43/237 (18%)
Query: 63  NLTPR--YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
           +L P   ++I+ ++G+G FG+V +  +++T    A KV+  +S  +  D  M+EID+L  
Sbjct: 32  DLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILAS 90
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                     + V++ + F Y N++ I+ E       D +      P     ++   +Q 
Sbjct: 91  C------DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 144
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L+++ Y+HD ++IH DLK  NIL        L G                   IKL DFG
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFT------LDG------------------DIKLADFG 180
Query: 239 STAFDN---QNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
            +A +    Q   S + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 181 VSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/345 (25%), Positives = 141/345 (40%), Gaps = 95/345 (27%)
Query: 70  ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
           I+SK +G G  G V   ++R+T ++VAI+++ S RK+        D A+    EI++L+ 
Sbjct: 138 IMSKTLGSGACGEVKLAFERKTCKKVAIRII-SKRKFAIGSAREADPALNVETEIEILKK 196
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           L           ++I+N+FD  ++  ++    G  LFD +  NK         + +  Q+
Sbjct: 197 L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 248
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L +V Y+H+  +IH DLKPEN+LL S E                     +   IK+ DFG
Sbjct: 249 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 287
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
            +    +     ++  T  Y APEV++ +   G++   D WS+G IL    +G   F  H
Sbjct: 288 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 347
Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--GAVSRESIKAVKKLDR 351
                                 R     +     G     PE    VS +++  VKK   
Sbjct: 348 ----------------------RTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKK--- 382
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                 LL  DP  R T  +AL HP+ ++
Sbjct: 383 ----------------------LLVVDPKARFTTEEALRHPWLQD 405

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 143/345 (41%), Gaps = 95/345 (27%)
Query: 70  ILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-------DAAM---IEIDVLQH 118
           I+SK +G G  G V   ++R+T ++VAI+++ S RK+        D A+    EI++L+ 
Sbjct: 152 IMSKTLGSGACGEVKLAFERKTCKKVAIRII-SKRKFAIGSAREADPALNVETEIEILKK 210
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
           L           ++I+N+FD  ++  ++    G  LFD +  NK         + +  Q+
Sbjct: 211 L------NHPCIIKIKNFFDAEDYYIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQM 262
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L +V Y+H+  +IH DLKPEN+LL S E                     +   IK+ DFG
Sbjct: 263 LLAVQYLHENGIIHRDLKPENVLLSSQE---------------------EDCLIKITDFG 301
Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQTH 293
            +    +     ++  T  Y APEV++ +   G++   D WS+G IL    +G   F  H
Sbjct: 302 HSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH 361
Query: 294 ENLEHL--AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
                L   +       +PE                     W E  VS +++  VKK   
Sbjct: 362 RTQVSLKDQITSGKYNFIPEV--------------------WAE--VSEKALDLVKK--- 396
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                 LL  DP  R T  +AL HP+ ++
Sbjct: 397 ----------------------LLVVDPKARFTTEEALRHPWLQD 419

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
           F+Y N+    F+ L P+L D+             +R +  +LL+++ Y H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
           P N++ +  E  KL                      +LID+G   F    + ++  V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
           +++ PE+++ L  + Y  DMWS+GC+   +    E  F  H+N + L  + + LG     
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                + G   Y  +      P  E  V R S K       LK M + +         D 
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
           L  LLRYD  ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
           F+Y N+    F+ L P+L D+             +R +  +LL+++ Y H   ++H D+K
Sbjct: 108 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
           P N++ +  E  KL                      +LID+G   F    + ++  V++R
Sbjct: 154 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 190
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
           +++ PE+++ L  + Y  DMWS+GC+   +    E  F  H+N + L  + + LG     
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 245
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                + G   Y  +      P  E  V R S K       LK M + +         D 
Sbjct: 246 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 295
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
           L  LLRYD  ERLTA +A+ HP+F+ +
Sbjct: 296 LDKLLRYDHQERLTALEAMTHPYFQQV 322

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 113/253 (44%), Gaps = 40/253 (15%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAM-IEIDVLQHLAKNDKGGSSH 129
           +G+G F +  E  D  T+E  A KVV     ++ ++   M  EI + + L       + H
Sbjct: 50  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSL------DNPH 103
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V    +F+  + + +V E     SL +  KR K    P    R F RQ ++ V Y+H+ 
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNN 161
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
           R+IH DLK  N+ L               + +M          +K+ DFG      FD +
Sbjct: 162 RVIHRDLKLGNLFL---------------NDDM---------DVKIGDFGLATKIEFDGE 197
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
               +  T +Y APEV+   G S+  D+WS+GCIL  L  G+  F+T    E    +++ 
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 306 LGPLPEHMIRRAS 318
              +P H+   AS
Sbjct: 258 EYSVPRHINPVAS 270

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
           F+Y N+    F+ L P+L D+             +R +  +LL+++ Y H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
           P N++ +  E  KL                      +LID+G   F    + ++  V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
           +++ PE+++ L  + Y  DMWS+GC+   +    E  F  H+N + L  + + LG     
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                + G   Y  +      P  E  V R S K       LK M + +         D 
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
           L  LLRYD  ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 111/251 (44%), Gaps = 36/251 (14%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRS--IRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           +G+G F +  E  D  T+E  A KVV    + K      +  ++  H + ++     H V
Sbjct: 34  LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN----PHVV 89
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
               +F+  + + +V E     SL +  KR K    P    R F RQ ++ V Y+H+ R+
Sbjct: 90  GFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPE--ARYFMRQTIQGVQYLHNNRV 147
Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQNH 247
           IH DLK  N+ L               + +M          +K+ DFG      FD +  
Sbjct: 148 IHRDLKLGNLFL---------------NDDM---------DVKIGDFGLATKIEFDGERK 183
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG 307
             +  T +Y APEV+   G S+  D+WS+GCIL  L  G+  F+T    E    +++   
Sbjct: 184 KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEY 243
Query: 308 PLPEHMIRRAS 318
            +P H+   AS
Sbjct: 244 SVPRHINPVAS 254

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
           F+Y N+    F+ L P+L D+             +R +  +LL+++ Y H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
           P N++ +  E  KL                      +LID+G   F    + ++  V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
           +++ PE+++ L  + Y  DMWS+GC+   +    E  F  H+N + L  + + LG     
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                + G   Y  +      P  E  V R S K       LK M + +         D 
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
           L  LLRYD  ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
           F+Y N+    F+ L P+L D+             +R +  +LL+++ Y H   ++H D+K
Sbjct: 108 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 153
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
           P N++ +  E  KL                      +LID+G   F    + ++  V++R
Sbjct: 154 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 190
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
           +++ PE+++ L  + Y  DMWS+GC+   +    E  F  H+N + L  + + LG     
Sbjct: 191 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 245
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                + G   Y  +      P  E  V R S K       LK M + +         D 
Sbjct: 246 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 295
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
           L  LLRYD  ERLTA +A+ HP+F+ +
Sbjct: 296 LDKLLRYDHQERLTALEAMTHPYFQQV 322

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
           F+Y N+    F+ L P+L D+             +R +  +LL+++ Y H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
           P N++ +  E  KL                      +LID+G   F    + ++  V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
           +++ PE+++ L  + Y  DMWS+GC+   +    E  F  H+N + L  + + LG     
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                + G   Y  +      P  E  V R S K       LK M + +         D 
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
           L  LLRYD  ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
           F+Y N+    F+ L P+L D+             +R +  +LL+++ Y H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
           P N++ +  E  KL                      +LID+G   F    + ++  V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
           +++ PE+++ L  + Y  DMWS+GC+   +    E  F  H+N + L  + + LG     
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                + G   Y  +      P  E  V R S K       LK M + +         D 
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
           L  LLRYD  ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 143/341 (41%), Gaps = 88/341 (25%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQ------HLAK 121
           Y++   +G+G F  V  C +R+T ++ A+K+V  + K+  +  +  + L+      H+ K
Sbjct: 28  YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 86
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSL-FDFLKR-NKYCPFPVDLVREFGRQL 178
           +      H V++   +     + +VFE + G  L F+ +KR +    +   +   + RQ+
Sbjct: 87  H-----PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 141
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEF---IKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           LE++ Y HD  +IH D+KP  +LL S E    +KL G+                 AI+L 
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF---------------GVAIQLG 186
Query: 236 DFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG-EALFQTHE 294
           + G  A         V T H+ APEV+    +  P D+W  G IL  L +G    + T E
Sbjct: 187 ESGLVA------GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 240
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
            L                         E   +   ++N  + +   ES K          
Sbjct: 241 RL------------------------FEGIIKGKYKMNPRQWSHISESAK---------- 266
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                         DL+  +L  DP+ER+T  +ALNHP+ +
Sbjct: 267 --------------DLVRRMLMLDPAERITVYEALNHPWLK 293

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
           F+Y N+    F+ L P+L D+             +R +  +LL+++ Y H   ++H D+K
Sbjct: 107 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 152
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
           P N++ +  E  KL                      +LID+G   F    + ++  V++R
Sbjct: 153 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 189
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
           +++ PE+++ L  + Y  DMWS+GC+   +    E  F  H+N + L  + + LG     
Sbjct: 190 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 244
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                + G   Y  +      P  E  V R S K       LK M + +         D 
Sbjct: 245 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 294
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
           L  LLRYD  ERLTA +A+ HP+F+ +
Sbjct: 295 LDKLLRYDHQERLTALEAMTHPYFQQV 321

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 119/267 (44%), Gaps = 58/267 (21%)
Query: 137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK 196
           F+Y N+    F+ L P+L D+             +R +  +LL+++ Y H   ++H D+K
Sbjct: 109 FEYVNNTD--FKVLYPTLTDYD------------IRYYIYELLKALDYCHSQGIMHRDVK 154
Query: 197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTR 254
           P N++ +  E  KL                      +LID+G   F    + ++  V++R
Sbjct: 155 PHNVM-IDHELRKL----------------------RLIDWGLAEFYHPGKEYNVRVASR 191
Query: 255 HYRAPEVILGL-GWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEH 312
           +++ PE+++ L  + Y  DMWS+GC+   +    E  F  H+N + L  + + LG     
Sbjct: 192 YFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLG----- 246
Query: 313 MIRRASRGTEKYFRRGSRLNWP--EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                + G   Y  +      P  E  V R S K       LK M + +         D 
Sbjct: 247 -----TDGLNVYLNKYRIELDPQLEALVGRHSRKP-----WLKFMNADNQHLVSPEAIDF 296
Query: 371 LHGLLRYDPSERLTARQALNHPFFRNL 397
           L  LLRYD  ERLTA +A+ HP+F+ +
Sbjct: 297 LDKLLRYDHQERLTALEAMTHPYFQQV 323

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 87/361 (24%), Positives = 135/361 (37%), Gaps = 100/361 (27%)
Query: 55  HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV----------RSIRK 104
           H      EN  P+      +G G    V  C  + T +  A+K++            +++
Sbjct: 10  HSTHGFYENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQE 65
Query: 105 YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKY 163
            R+A + E+D+L+ ++     G  + +Q+++ ++      +VF+ +    LFD+L     
Sbjct: 66  LREATLKEVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK-- 118
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
                   R+  R LLE +  +H L ++H DLKPENIL                      
Sbjct: 119 VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENIL---------------------- 156
Query: 224 RCLPKSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGL------GWSYPCDMWS 275
             L     IKL DFG S   D  +    +  T  Y APE+I         G+    DMWS
Sbjct: 157 --LDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWS 214
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
            G I+  L  G   F   + +                M+R    G  ++   GS    PE
Sbjct: 215 TGVIMYTLLAGSPPFWHRKQM---------------LMLRMIMSGNYQF---GS----PE 252
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                                    D    T+ DL+   L   P +R TA +AL HPFF+
Sbjct: 253 W------------------------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 288
Query: 396 N 396
Sbjct: 289 Q 289

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score = 79.3 bits (194), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 143/341 (41%), Gaps = 88/341 (25%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQ------HLAK 121
           Y++   +G+G F  V  C +R+T ++ A+K+V  + K+  +  +  + L+      H+ K
Sbjct: 26  YELCEVIGKGPFSVVRRCINRETGQQFAVKIV-DVAKFTSSPGLSTEDLKREASICHMLK 84
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSL-FDFLKR-NKYCPFPVDLVREFGRQL 178
           +      H V++   +     + +VFE + G  L F+ +KR +    +   +   + RQ+
Sbjct: 85  H-----PHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEF---IKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           LE++ Y HD  +IH D+KP  +LL S E    +KL G+                 AI+L 
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF---------------GVAIQLG 184
Query: 236 DFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG-EALFQTHE 294
           + G  A         V T H+ APEV+    +  P D+W  G IL  L +G    + T E
Sbjct: 185 ESGLVA------GGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTKE 238
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
            L                         E   +   ++N  + +   ES K          
Sbjct: 239 RL------------------------FEGIIKGKYKMNPRQWSHISESAK---------- 264
Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                         DL+  +L  DP+ER+T  +ALNHP+ +
Sbjct: 265 --------------DLVRRMLMLDPAERITVYEALNHPWLK 291

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY-------RDAAMIEIDVLQHLA 120
           Y++  ++G G F  V +C  + T +  A K ++  R         R+    E+++L+ + 
Sbjct: 28  YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                   + + + + F+ +  + ++ E + G  LFDFL   +      D   +F +Q+L
Sbjct: 88  H------PNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQIL 139
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           + V Y+H  R+ H DLKPENI+L+                    + +P +  IKLIDFG 
Sbjct: 140 DGVHYLHSKRIAHFDLKPENIMLLD-------------------KNVP-NPRIKLIDFGI 179
Query: 239 STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
           +   +  N   +I  T  + APE++         DMWS+G I   L +G + F      E
Sbjct: 180 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 239
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
            L  +        E      S   + + RR
Sbjct: 240 TLTNISAVNYDFDEEYFSNTSELAKDFIRR 269

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/354 (24%), Positives = 134/354 (37%), Gaps = 100/354 (28%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV----------RSIRKYRDAAMI 111
           EN  P+      +G G    V  C  + T +  A+K++            +++ R+A + 
Sbjct: 4   ENYEPK----EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 59
Query: 112 EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDL 170
           E+D+L+ ++     G  + +Q+++ ++      +VF+ +    LFD+L            
Sbjct: 60  EVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKE 112
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
            R+  R LLE +  +H L ++H DLKPENIL                        L    
Sbjct: 113 TRKIMRALLEVICALHKLNIVHRDLKPENIL------------------------LDDDM 148
Query: 231 AIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGL------GWSYPCDMWSVGCILVE 282
            IKL DFG S   D  +    +  T  Y APE+I         G+    DMWS G I+  
Sbjct: 149 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 208
Query: 283 LCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES 342
           L  G   F   + +                M+R    G  ++   GS    PE       
Sbjct: 209 LLAGSPPFWHRKQM---------------LMLRMIMSGNYQF---GS----PEW------ 240
Query: 343 IKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                             D    T+ DL+   L   P +R TA +AL HPFF+ 
Sbjct: 241 ------------------DDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score = 79.0 bits (193), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KYRDAAMIEIDVLQHLA 120
           Y++  ++G G F  V +C  + T +  A K ++  R         R+    E+++L+ + 
Sbjct: 7   YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                   + + + + F+ +  + ++ E + G  LFDFL   +      D   +F +Q+L
Sbjct: 67  ------HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQIL 118
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           + V Y+H  R+ H DLKPENI+L+                    + +P +  IKLIDFG 
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLD-------------------KNVP-NPRIKLIDFGI 158
Query: 239 STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
           +   +  N   +I  T  + APE++         DMWS+G I   L +G + F      E
Sbjct: 159 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQE 218
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
            L  +        E      S   + + RR
Sbjct: 219 TLTNISAVNYDFDEEYFSNTSELAKDFIRR 248

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 79.0 bits (193), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           +G+GT+G V    D   Q R+AIK +     +Y      EI + +HL   +       VQ
Sbjct: 30  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN------IVQ 83
Query: 133 IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYMHDLRL 190
               F     I I  E++       L R+K+ P   +   +  + +Q+LE + Y+HD ++
Sbjct: 84  YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST---AFDNQNH 247
           +H D+K +N+L+ +                        S  +K+ DFG++   A  N   
Sbjct: 144 VHRDIKGDNVLINTY-----------------------SGVLKISDFGTSKRLAGINPCT 180
Query: 248 SSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALF 290
            +   T  Y APE+I     G+    D+WS+GC ++E+ TG+  F
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 43/237 (18%)
Query: 63  NLTPR--YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
           +L P   ++I+ ++G+G FG+V +  +++T    A KV+  +S  +  D  M+EID+L  
Sbjct: 32  DLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY-MVEIDILAS 90
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                     + V++ + F Y N++ I+ E       D +      P     ++   +Q 
Sbjct: 91  C------DHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQT 144
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L+++ Y+HD ++IH DLK  NIL        L G                   IKL DFG
Sbjct: 145 LDALNYLHDNKIIHRDLKAGNILFT------LDG------------------DIKLADFG 180
Query: 239 STAFDN---QNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
            +A +    Q     + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 181 VSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 237

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
           Y I  ++G G F  V +C ++ T    A K +     R+ R+   R+    E+ +L+ + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
            ++       + + + ++ R  + ++ E + G  LFDFL + +      +    F +Q+L
Sbjct: 74  HHN------VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           + V Y+H  ++ H DLKPENI+L+    I +P                    IKLIDFG 
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                D     +I  T  + APE++         DMWS+G I   L +G + F      E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
            LA +        E    + S   + + R+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 116/270 (42%), Gaps = 38/270 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
           Y I  ++G G F  V +C ++ T    A K +     R+ R+   R+    E+ +L+ + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
            ++       + + + ++ R  + ++ E + G  LFDFL + +      +    F +Q+L
Sbjct: 74  HHN------VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           + V Y+H  ++ H DLKPENI+L+    I +P                    IKLIDFG 
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                D     +I  T  + APE++         DMWS+G I   L +G + F      E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
            LA +        E    + S   + + R+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           +G+GT+G V    D   Q R+AIK +     +Y      EI + +HL   +       VQ
Sbjct: 16  LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKN------IVQ 69
Query: 133 IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYMHDLRL 190
               F     I I  E++       L R+K+ P   +   +  + +Q+LE + Y+HD ++
Sbjct: 70  YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 129
Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST---AFDNQNH 247
           +H D+K +N+L+ +                        S  +K+ DFG++   A  N   
Sbjct: 130 VHRDIKGDNVLINTY-----------------------SGVLKISDFGTSKRLAGINPCT 166
Query: 248 SSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALF 290
            +   T  Y APE+I     G+    D+WS+GC ++E+ TG+  F
Sbjct: 167 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
           Y I  ++G G F  V +C ++ T    A K +     R+ R+   R+    E+ +L+ + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
            ++       + + + ++ R  + ++ E + G  LFDFL + +      +    F +Q+L
Sbjct: 74  HHN------VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           + V Y+H  ++ H DLKPENI+L+    I +P                    IKLIDFG 
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                D     +I  T  + APE++         DMWS+G I   L +G + F      E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
            LA +        E      S   + + R+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 83/346 (23%), Positives = 129/346 (37%), Gaps = 95/346 (27%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---------SIRKYRDAAMIEIDVLQ 117
           +Y     +G G    V  C  R T    A+K++           + + R+A   E  +L+
Sbjct: 95  KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
            +A     G  H + + + ++  + + +VF+ +    LFD+L   +         R   R
Sbjct: 155 QVA-----GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMR 207
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            LLE+V+++H   ++H DLKPENIL                        L  +  I+L D
Sbjct: 208 SLLEAVSFLHANNIVHRDLKPENIL------------------------LDDNMQIRLSD 243
Query: 237 FGSTAF--DNQNHSSIVSTRHYRAPEVI------LGLGWSYPCDMWSVGCILVELCTGEA 288
           FG +      +    +  T  Y APE++         G+    D+W+ G IL  L  G  
Sbjct: 244 FGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSP 303
Query: 289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
            F     +                M+R    G  ++    S   W               
Sbjct: 304 PFWHRRQI---------------LMLRMIMEGQYQF----SSPEW--------------- 329
Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       D   ST+ DL+  LL+ DP  RLTA QAL HPFF
Sbjct: 330 ------------DDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score = 78.2 bits (191), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
           Y I  ++G G F  V +C ++ T    A K +     R+ R+   R+    E+ +L+ + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
            ++       + + + ++ R  + ++ E + G  LFDFL + +      +    F +Q+L
Sbjct: 74  HHN------VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           + V Y+H  ++ H DLKPENI+L+    I +P                    IKLIDFG 
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                D     +I  T  + APE++         DMWS+G I   L +G + F      E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
            LA +        E      S   + + R+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
           Y I  ++G G F  V +C ++ T    A K +     R+ R+   R+    E+ +L+ + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
            ++       + + + ++ R  + ++ E + G  LFDFL + +      +    F +Q+L
Sbjct: 74  HHN------VITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           + V Y+H  ++ H DLKPENI+L+    I +P                    IKLIDFG 
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                D     +I  T  + APE++         DMWS+G I   L +G + F      E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
            LA +        E      S   + + R+
Sbjct: 226 TLANITSVSYDFDEEFFSHTSELAKDFIRK 255

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 60/235 (25%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG- 126
           Y+I+  +GEG+FG+V   +   T ++VA+K++                 + LAK+D  G 
Sbjct: 16  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 60
Query: 127 ------------SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL-KRNKYCPFPVDLVRE 173
                         H +++ +    ++ I +V E  G  LFD++ +R+K         R 
Sbjct: 61  IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARR 117
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q++ +V Y H  +++H DLKPEN+L                        L +   +K
Sbjct: 118 FFQQIISAVEYCHRHKIVHRDLKPENLL------------------------LDEHLNVK 153
Query: 234 LIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCIL-VELC 284
           + DFG +    D     +   + +Y APEVI G  ++ P  D+WS G IL V LC
Sbjct: 154 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 208

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 37/239 (15%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL 119
           +G+ +  RYKI+ K+G G    V    D     +VAIK +    + ++  +   +  + +
Sbjct: 5   IGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFE--REV 62
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
             + +    + V + +  +  +   +V E + GP+L ++++   + P  VD    F  Q+
Sbjct: 63  HNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIE--SHGPLSVDTAINFTNQI 120
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L+ + + HD+R++H D+KP+NIL+ S++                         +K+ DFG
Sbjct: 121 LDGIKHAHDMRIVHRDIKPQNILIDSNK------------------------TLKIFDFG 156
Query: 239 ------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
                  T+    NH  ++ T  Y +PE   G       D++S+G +L E+  GE  F 
Sbjct: 157 IAKALSETSLTQTNH--VLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFN 213

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 60/235 (25%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG- 126
           Y+I+  +GEG+FG+V   +   T ++VA+K++                 + LAK+D  G 
Sbjct: 15  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 59
Query: 127 ------------SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL-KRNKYCPFPVDLVRE 173
                         H +++ +    ++ I +V E  G  LFD++ +R+K         R 
Sbjct: 60  IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARR 116
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q++ +V Y H  +++H DLKPEN+L                        L +   +K
Sbjct: 117 FFQQIISAVEYCHRHKIVHRDLKPENLL------------------------LDEHLNVK 152
Query: 234 LIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCIL-VELC 284
           + DFG +    D     +   + +Y APEVI G  ++ P  D+WS G IL V LC
Sbjct: 153 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 207

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 85/337 (25%), Positives = 138/337 (40%), Gaps = 84/337 (24%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K ++   K R    +     Q         
Sbjct: 63  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQ--------- 113
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 114 CPHIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEA 173
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG  A
Sbjct: 174 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG-FA 211
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            +  +H+S+ +   T +Y APEV+    +   CD WS+G I   L  G   F ++  L  
Sbjct: 212 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPFYSNHGL-- 269
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                 A+ P           G +   R G      PE +   E +K             
Sbjct: 270 ------AISP-----------GXKTRIRXGQYEFPNPEWSEVSEEVKX------------ 300
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                       L+  LL+ +P++R T  +  NHP+ 
Sbjct: 301 ------------LIRNLLKTEPTQRXTITEFXNHPWI 325

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 60/235 (25%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG- 126
           Y+I+  +GEG+FG+V   +   T ++VA+K++                 + LAK+D  G 
Sbjct: 6   YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 50
Query: 127 ------------SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL-KRNKYCPFPVDLVRE 173
                         H +++ +    ++ I +V E  G  LFD++ +R+K         R 
Sbjct: 51  IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARR 107
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q++ +V Y H  +++H DLKPEN+L                        L +   +K
Sbjct: 108 FFQQIISAVEYCHRHKIVHRDLKPENLL------------------------LDEHLNVK 143
Query: 234 LIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCIL-VELC 284
           + DFG +    D     +   + +Y APEVI G  ++ P  D+WS G IL V LC
Sbjct: 144 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 198

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 60/235 (25%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG- 126
           Y+I+  +GEG+FG+V   +   T ++VA+K++                 + LAK+D  G 
Sbjct: 10  YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINK---------------KVLAKSDMQGR 54
Query: 127 ------------SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL-KRNKYCPFPVDLVRE 173
                         H +++ +    ++ I +V E  G  LFD++ +R+K         R 
Sbjct: 55  IEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSE---QEARR 111
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q++ +V Y H  +++H DLKPEN+L                        L +   +K
Sbjct: 112 FFQQIISAVEYCHRHKIVHRDLKPENLL------------------------LDEHLNVK 147
Query: 234 LIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCIL-VELC 284
           + DFG +    D     +   + +Y APEVI G  ++ P  D+WS G IL V LC
Sbjct: 148 IADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLC 202

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 133/334 (39%), Gaps = 83/334 (24%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKNDK 124
           Y IL ++G G FG V  C ++ T      K + +   + KY      EI ++  L     
Sbjct: 53  YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKY--TVKNEISIMNQLH---- 106
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                 + + + F+ +  + ++ E L G  LFD +    Y     +++  + RQ  E + 
Sbjct: 107 --HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVIN-YMRQACEGLK 163
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
           +MH+  ++H D+KPENI+  +                       K+S++K+IDFG     
Sbjct: 164 HMHEHSIVHLDIKPENIMCETK----------------------KASSVKIIDFGLATKL 201
Query: 244 NQNHSSIVS--TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
           N +    V+  T  + APE++      +  DMW++G +   L +G + F   ++LE L  
Sbjct: 202 NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQN 261
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           ++R                            + E A S  S +A                
Sbjct: 262 VKRC------------------------DWEFDEDAFSSVSPEA---------------- 281
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                  D +  LL+ +P +RLT   AL HP+ +
Sbjct: 282 ------KDFIKNLLQKEPRKRLTVHDALEHPWLK 309

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 115/270 (42%), Gaps = 38/270 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRK--YRDAAMIEIDVLQHLA 120
           Y I  ++G G F  V +C ++ T    A K +     R+ R+   R+    E+ +L+ + 
Sbjct: 14  YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL 73
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                   + + + + ++ R  + ++ E + G  LFDFL + +      +    F +Q+L
Sbjct: 74  ------HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQIL 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           + V Y+H  ++ H DLKPENI+L+    I +P                    IKLIDFG 
Sbjct: 126 DGVNYLHTKKIAHFDLKPENIMLLDKN-IPIP-------------------HIKLIDFGL 165
Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                D     +I  T  + APE++         DMWS+G I   L +G + F      E
Sbjct: 166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQE 225
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRR 327
            LA +        E    + S   + + R+
Sbjct: 226 TLANITAVSYDFDEEFFSQTSELAKDFIRK 255

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 134/335 (40%), Gaps = 80/335 (23%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAM-IEIDVLQHLAK 121
           N+   +  +  +G G F  V     R T +  A+K ++    +RD+++  EI VL+ +  
Sbjct: 6   NIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKH 65
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGRQLL 179
            +       V + + ++   H  +V + + G  LFD  L+R  Y      LV +   Q+L
Sbjct: 66  EN------IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVL 116
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            +V Y+H+  ++H DLKPEN+L ++ E                     ++S I + DFG 
Sbjct: 117 SAVKYLHENGIVHRDLKPENLLYLTPE---------------------ENSKIMITDFGL 155
Query: 240 TAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
           +  + N   S+   T  Y APEV+    +S   D WS+G I   L  G   F  +E  E 
Sbjct: 156 SKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF--YEETES 213
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
                           +   +  E Y+   S   W                         
Sbjct: 214 ----------------KLFEKIKEGYYEFESPF-W------------------------- 231
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
             D    +  D +  LL  DP+ER T  +AL+HP+
Sbjct: 232 --DDISESAKDFICHLLEKDPNERYTCEKALSHPW 264

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 136/332 (40%), Gaps = 81/332 (24%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           Y +   +G G++     C  + T    A+KV+   +  RD +  EI++L        G  
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKVID--KSKRDPSE-EIEILLRY-----GQH 80
Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
            + + +++ +D   H+ +V E + G  L D + R K+  F           + ++V Y+H
Sbjct: 81  PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLH 138
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
              ++H DLKP NIL V            S + E    CL      ++ DFG        
Sbjct: 139 SQGVVHRDLKPSNILYVD----------ESGNPE----CL------RICDFGFAKQLRAE 178
Query: 247 HSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
           +  +++   T ++ APEV+   G+   CD+WS+G +L  +  G   F             
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF------------- 225
Query: 304 RALGP--LPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
            A GP   PE ++ R   G  K+   G   NW                    N VS    
Sbjct: 226 -ANGPSDTPEEILTRIGSG--KFTLSGG--NW--------------------NTVS---- 256
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
               T  DL+  +L  DP +RLTA+Q L HP+
Sbjct: 257 ---ETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 136/332 (40%), Gaps = 81/332 (24%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           Y +   +G G++     C  + T    A+KV+   +  RD +  EI++L        G  
Sbjct: 29  YVVKETIGVGSYSECKRCVHKATNMEYAVKVID--KSKRDPSE-EIEILLRY-----GQH 80
Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
            + + +++ +D   H+ +V E + G  L D + R K+  F           + ++V Y+H
Sbjct: 81  PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKF--FSEREASFVLHTIGKTVEYLH 138
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
              ++H DLKP NIL V            S + E    CL      ++ DFG        
Sbjct: 139 SQGVVHRDLKPSNILYVD----------ESGNPE----CL------RICDFGFAKQLRAE 178
Query: 247 HSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
           +  +++   T ++ APEV+   G+   CD+WS+G +L  +  G   F             
Sbjct: 179 NGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF------------- 225
Query: 304 RALGP--LPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
            A GP   PE ++ R   G  K+   G   NW                    N VS    
Sbjct: 226 -ANGPSDTPEEILTRIGSG--KFTLSGG--NW--------------------NTVS---- 256
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
               T  DL+  +L  DP +RLTA+Q L HP+
Sbjct: 257 ---ETAKDLVSKMLHVDPHQRLTAKQVLQHPW 285

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score = 76.6 bits (187), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 136/343 (39%), Gaps = 88/343 (25%)
Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
            E++   Y     +G G F  V+   D++TQ+ VAIK +  +++     +   EI VL  
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 72
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGR 176
           +         + V + + ++   H+ ++ + + G  LFD  +++  Y        R+  R
Sbjct: 73  IKH------PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASR 120
Query: 177 ---QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
              Q+L++V Y+HDL ++H DLKPEN+L  S                     L + S I 
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---------------------LDEDSKIM 159
Query: 234 LIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
           + DFG +  ++     S+   T  Y APEV+    +S   D WS+G I   L  G   F 
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
              + +   + E+ L                                     KA  + D 
Sbjct: 220 DENDAK---LFEQIL-------------------------------------KAEYEFD- 238
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                S + D    +  D +  L+  DP +R T  QAL HP+ 
Sbjct: 239 -----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 152/337 (45%), Gaps = 61/337 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           Y+++ K+G G +  V E  +    ERV +K+++           +I     + +N +GG+
Sbjct: 40  YQLVRKLGRGKYSEVFEAINITNNERVVVKILKP------VKKKKIKREVKILENLRGGT 93
Query: 128 SHCVQIRNWFDYRNHI-CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           +    I    D  +    +VFE +  + F    +  Y       +R +  +LL+++ Y H
Sbjct: 94  NIIKLIDTVKDPVSKTPALVFEYINNTDF----KQLYQILTDFDIRFYMYELLKALDYCH 149
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-- 244
              ++H D+KP N+++   +                         ++LID+G   F +  
Sbjct: 150 SKGIMHRDVKPHNVMIDHQQ-----------------------KKLRLIDWGLAEFYHPA 186
Query: 245 QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
           Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F   +N + L  +
Sbjct: 187 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 246
Query: 303 ERALGPLPEH-MIRRASRGTEKYFR----RGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            + LG    +  +++     + +F     + SR  W E  +  E+          +++VS
Sbjct: 247 AKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRW-ENFIHSEN----------RHLVS 295
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                      DLL  LLRYD  +RLTA++A+ HP+F
Sbjct: 296 -------PEALDLLDKLLRYDHQQRLTAKEAMEHPYF 325

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score = 75.5 bits (184), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 138/343 (40%), Gaps = 88/343 (25%)
Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAM-IEIDVLQH 118
            E++   Y     +G G F  V+   D++TQ+ VAIK + +   + ++ +M  EI VL  
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGR 176
           +         + V + + ++   H+ ++ + + G  LFD  +++  Y        R+  R
Sbjct: 73  IKH------PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASR 120
Query: 177 ---QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
              Q+L++V Y+HDL ++H DLKPEN+L  S                     L + S I 
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---------------------LDEDSKIM 159
Query: 234 LIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
           + DFG +  ++     S+   T  Y APEV+    +S   D WS+G I   L  G   F 
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
              + +   + E+ L                                     KA  + D 
Sbjct: 220 DENDAK---LFEQIL-------------------------------------KAEYEFD- 238
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                S + D    +  D +  L+  DP +R T  QAL HP+ 
Sbjct: 239 -----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G F +  E  D  T+E  A K+V +S+      R+   +EI + + LA        H
Sbjct: 29  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 82
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V    +F+  + + +V E     SL +  KR K    P    R + RQ++    Y+H  
Sbjct: 83  VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 140
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
           R+IH DLK  N+ L                         +   +K+ DFG      +D +
Sbjct: 141 RVIHRDLKLGNLFLN------------------------EDLEVKIGDFGLATKVEYDGE 176
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
              ++  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++ 
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
              +P+H+   A+   +K  +
Sbjct: 237 EYSIPKHINPVAASLIQKMLQ 257

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 152/337 (45%), Gaps = 61/337 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           Y+++ K+G G +  V E  +    ERV +K+++           +I     + +N +GG+
Sbjct: 45  YQLVRKLGRGKYSEVFEAINITNNERVVVKILKP------VKKKKIKREVKILENLRGGT 98
Query: 128 SHCVQIRNWFDYRNHI-CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           +    I    D  +    +VFE +  + F    +  Y       +R +  +LL+++ Y H
Sbjct: 99  NIIKLIDTVKDPVSKTPALVFEYINNTDF----KQLYQILTDFDIRFYMYELLKALDYCH 154
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-- 244
              ++H D+KP N+++   +                         ++LID+G   F +  
Sbjct: 155 SKGIMHRDVKPHNVMIDHQQ-----------------------KKLRLIDWGLAEFYHPA 191
Query: 245 QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
           Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F   +N + L  +
Sbjct: 192 QEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 251
Query: 303 ERALGPLPEH-MIRRASRGTEKYFR----RGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
            + LG    +  +++     + +F     + SR  W E  +  E+          +++VS
Sbjct: 252 AKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRW-ENFIHSEN----------RHLVS 300
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                      DLL  LLRYD  +RLTA++A+ HP+F
Sbjct: 301 -------PEALDLLDKLLRYDHQQRLTAKEAMEHPYF 330

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 46/263 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI---EIDVLQHLAKND 123
           Y I   +GEG+FG+V      +TQ++VA+K + R + K  D  M    EI  L+ L    
Sbjct: 11  YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR--- 67
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                H +++ +       I +V E  G  LFD++   K      D  R F +Q++ ++ 
Sbjct: 68  ---HPHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKKR--MTEDEGRRFFQQIICAIE 122
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF- 242
           Y H  +++H DLKPEN+L                        L  +  +K+ DFG +   
Sbjct: 123 YCHRHKIVHRDLKPENLL------------------------LDDNLNVKIADFGLSNIM 158
Query: 243 -DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTH--ENL-- 296
            D     +   + +Y APEVI G  ++ P  D+WS G +L  +  G   F      NL  
Sbjct: 159 TDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK 218
Query: 297 ---EHLAMMERALGPLPEHMIRR 316
                + +M   L P  + +IRR
Sbjct: 219 KVNSCVYVMPDFLSPGAQSLIRR 241

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 138/343 (40%), Gaps = 88/343 (25%)
Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAM-IEIDVLQH 118
            E++   Y     +G G F  V+   D++TQ+ VAIK + +   + ++ +M  EI VL  
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGR 176
           +         + V + + ++   H+ ++ + + G  LFD  +++  Y        R+  R
Sbjct: 73  IK------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASR 120
Query: 177 ---QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
              Q+L++V Y+HDL ++H DLKPEN+L  S                     L + S I 
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---------------------LDEDSKIM 159
Query: 234 LIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
           + DFG +  ++     S+   T  Y APEV+    +S   D WS+G I   L  G   F 
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
             EN                                       +  +  + +KA  + D 
Sbjct: 220 D-EN---------------------------------------DAKLFEQILKAEYEFD- 238
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                S + D    +  D +  L+  DP +R T  QAL HP+ 
Sbjct: 239 -----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 138/343 (40%), Gaps = 88/343 (25%)
Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAM-IEIDVLQH 118
            E++   Y     +G G F  V+   D++TQ+ VAIK + +   + ++ +M  EI VL  
Sbjct: 13  AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGR 176
           +         + V + + ++   H+ ++ + + G  LFD  +++  Y        R+  R
Sbjct: 73  IKH------PNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASR 120
Query: 177 ---QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
              Q+L++V Y+HDL ++H DLKPEN+L  S                     L + S I 
Sbjct: 121 LIFQVLDAVKYLHDLGIVHRDLKPENLLYYS---------------------LDEDSKIM 159
Query: 234 LIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
           + DFG +  ++     S+   T  Y APEV+    +S   D WS+G I   L  G   F 
Sbjct: 160 ISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFY 219
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
              + +   + E+ L                                     KA  + D 
Sbjct: 220 DENDAK---LFEQIL-------------------------------------KAEYEFD- 238
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                S + D    +  D +  L+  DP +R T  QAL HP+ 
Sbjct: 239 -----SPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWI 276

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G F +  E  D  T+E  A K+V +S+      R+   +EI + + LA        H
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 78
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V    +F+  + + +V E     SL +  KR K    P    R + RQ++    Y+H  
Sbjct: 79  VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 136
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
           R+IH DLK  N+ L                         +   +K+ DFG      +D +
Sbjct: 137 RVIHRDLKLGNLFLN------------------------EDLEVKIGDFGLATKVEYDGE 172
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
              ++  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++ 
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
              +P+H+   A+   +K  +
Sbjct: 233 EYSIPKHINPVAASLIQKMLQ 253

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 115/261 (44%), Gaps = 40/261 (15%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G F +  E  D  T+E  A K+V +S+      R+   +EI + + LA        H
Sbjct: 25  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 78
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V    +F+  + + +V E     SL +  KR K    P    R + RQ++    Y+H  
Sbjct: 79  VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 136
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
           R+IH DLK  N+ L                         +   +K+ DFG      +D +
Sbjct: 137 RVIHRDLKLGNLFLN------------------------EDLEVKIGDFGLATKVEYDGE 172
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
              ++  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++ 
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
              +P+H+   A+   +K  +
Sbjct: 233 EYSIPKHINPVAASLIQKMLQ 253

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 134/297 (45%), Gaps = 46/297 (15%)
Query: 55  HYVFNLGENLTP-RYKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVR-SIRKYRDA- 108
           H+V    E   P  +++L  +G+G+FG+V    +     +    A+KV++ +  K RD  
Sbjct: 16  HHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRV 75
Query: 109 -AMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPF 166
              +E D+L  +           V++   F     + ++ + L G  LF  L  +K   F
Sbjct: 76  RTKMERDILADV------NHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKEVMF 127
Query: 167 PVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL 226
             + V+ +  +L   + ++H L +I+ DLKPENILL                        
Sbjct: 128 TEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL------------------------ 163
Query: 227 PKSSAIKLIDFGST--AFDNQNHS-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
            +   IKL DFG +  A D++  + S   T  Y APEV+   G S+  D WS G ++ E+
Sbjct: 164 DEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEM 223
Query: 284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR--GSRL-NWPEGA 337
            TG   FQ  +  E + ++ +A   +P+ +   A       F+R   +RL + P+GA
Sbjct: 224 LTGSLPFQGKDRKETMTLILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGA 280

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 74.7 bits (182), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 163/361 (45%), Gaps = 51/361 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHLAKNDK 124
           Y I   +G G++G V   +D+ T++ VAIK V R      D   I  EI +L  L K+D 
Sbjct: 28  YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDY 86
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA- 183
               + + I +     + + IV E     L    K       P+ L  E  + +L ++  
Sbjct: 87  IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEEHIKTILYNLLL 140
Query: 184 ---YMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAI--KLID 236
              ++H+  +IH DLKP N LL     +K+   G  R+ + E       K + I   L +
Sbjct: 141 GENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE-------KDTNIVNDLEE 193
Query: 237 FGSTAFDNQN----HSSIVSTRHYRAPEVI-LGLGWSYPCDMWSVGCILVELCTGEALFQ 291
                  N+N     +S V TR YRAPE+I L   ++   D+WS GCI  EL     + Q
Sbjct: 194 NEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN---MLQ 250
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSR--LNW---PEGAVSRESIKAV 346
           +H N          L P          R ++K   + +R  LN      G  + + +K +
Sbjct: 251 SHIN---DPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNI 307
Query: 347 KKLDRLKNM------VSLHVDRARSTLTD----LLHGLLRYDPSERLTARQALNHPFFRN 396
            K + +K +        +++ +   +++D    LL  +L+++P++R+T  QAL+HP+ ++
Sbjct: 308 NKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKD 367
Query: 397 L 397
           +
Sbjct: 368 V 368

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 40/261 (15%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G F +  E  D  T+E  A K+V +S+      R+   +EI + + LA        H
Sbjct: 49  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 102
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V    +F+  + + +V E     SL +  KR K    P    R + RQ++    Y+H  
Sbjct: 103 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 160
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
           R+IH DLK  N+ L                         +   +K+ DFG      +D +
Sbjct: 161 RVIHRDLKLGNLFLN------------------------EDLEVKIGDFGLATKVEYDGE 196
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
               +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++ 
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
              +P+H+   A+   +K  +
Sbjct: 257 EYSIPKHINPVAASLIQKMLQ 277

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 102/250 (40%), Gaps = 58/250 (23%)
Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
            P  +V+    Q+L+ + Y+H   ++H DLKP NIL++       P   R    +M F  
Sbjct: 125 LPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG----PERGRVKIADMGFAR 180
Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELC 284
           L  S    L D             +V T  YRAPE++LG   ++   D+W++GCI  EL 
Sbjct: 181 LFNSPLKPLADL----------DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELL 230
Query: 285 TGEALFQTHE------NLEHLAMMERALG--------------PLPEHMIRRASRGTEKY 324
           T E +F   +      N  H   ++R                  +PEH          K 
Sbjct: 231 TSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEH------STLMKD 284
Query: 325 FRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT 384
           FRR +  N             +K +++       H  +  S    LL  LL  DP +R+T
Sbjct: 285 FRRNTYTN----------CSLIKYMEK-------HKVKPDSKAFHLLQKLLTMDPIKRIT 327
Query: 385 ARQALNHPFF 394
           + QA+  P+F
Sbjct: 328 SEQAMQDPYF 337

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 40/261 (15%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G F +  E  D  T+E  A K+V +S+      R+   +EI + + LA        H
Sbjct: 47  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 100
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V    +F+  + + +V E     SL +  KR K    P    R + RQ++    Y+H  
Sbjct: 101 VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 158
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
           R+IH DLK  N+ L                         +   +K+ DFG      +D +
Sbjct: 159 RVIHRDLKLGNLFLN------------------------EDLEVKIGDFGLATKVEYDGE 194
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
               +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++ 
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
              +P+H+   A+   +K  +
Sbjct: 255 EYSIPKHINPVAASLIQKMLQ 275

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 119/273 (43%), Gaps = 40/273 (14%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIK---VVRSIRKYRDAAMIEIDVLQHLAKND 123
           +Y  L K+GEG+FG+ +     +   +  IK   + R   K R+ +  E+ VL ++    
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKH-- 82
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                + VQ R  F+    + IV +   G  LF  +   K   F  D + ++  Q+  ++
Sbjct: 83  ----PNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL 138
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++HD +++H D+K +NI L                         K   ++L DFG    
Sbjct: 139 KHVHDRKILHRDIKSQNIFLT------------------------KDGTVQLGDFGIARV 174
Query: 243 DNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ--THENLE 297
            N       + + T +Y +PE+     ++   D+W++GC+L ELCT +  F+  + +NL 
Sbjct: 175 LNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV 234
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSR 330
            L ++  +  P+  H          + F+R  R
Sbjct: 235 -LKIISGSFPPVSLHYSYDLRSLVSQLFKRNPR 266

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 114/261 (43%), Gaps = 40/261 (15%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV-RSI---RKYRDAAMIEIDVLQHLAKNDKGGSSH 129
           +G+G F +  E  D  T+E  A K+V +S+      R+   +EI + + LA        H
Sbjct: 23  LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQ------H 76
Query: 130 CVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            V    +F+  + + +V E     SL +  KR K    P    R + RQ++    Y+H  
Sbjct: 77  VVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPE--ARYYLRQIVLGCQYLHRN 134
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQ 245
           R+IH DLK  N+ L                         +   +K+ DFG      +D +
Sbjct: 135 RVIHRDLKLGNLFL------------------------NEDLEVKIGDFGLATKVEYDGE 170
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
               +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T    E    +++ 
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 306 LGPLPEHMIRRASRGTEKYFR 326
              +P+H+   A+   +K  +
Sbjct: 231 EYSIPKHINPVAASLIQKMLQ 251

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 49/304 (16%)
Query: 52  REGHYVFNLGENLTP-RYKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVR-SIRKYR 106
           +EGH      E   P ++++L  +G+G+FG+V    +      ++  A+KV++ +  K R
Sbjct: 15  KEGH------EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR 68
Query: 107 DA--AMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY 163
           D     +E D+L  +           V++   F     + ++ + L G  LF  L  +K 
Sbjct: 69  DRVRTKMERDILVEV------NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKE 120
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
             F  + V+ +  +L  ++ ++H L +I+ DLKPENILL                     
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL--------------------- 159
Query: 224 RCLPKSSAIKLIDFGST--AFDNQNHS-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
               +   IKL DFG +  + D++  + S   T  Y APEV+   G +   D WS G ++
Sbjct: 160 ---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR 340
            E+ TG   FQ  +  E + M+ +A   +P+ +   A       F+R        G    
Sbjct: 217 FEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 276
Query: 341 ESIK 344
           E IK
Sbjct: 277 EEIK 280

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 49/304 (16%)
Query: 52  REGHYVFNLGENLTP-RYKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVR-SIRKYR 106
           +EGH      E   P ++++L  +G+G+FG+V    +      ++  A+KV++ +  K R
Sbjct: 16  KEGH------EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR 69
Query: 107 DAA--MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY 163
           D     +E D+L  +           V++   F     + ++ + L G  LF  L  +K 
Sbjct: 70  DRVRTKMERDILVEV------NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKE 121
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
             F  + V+ +  +L  ++ ++H L +I+ DLKPENILL                     
Sbjct: 122 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL--------------------- 160
Query: 224 RCLPKSSAIKLIDFGST--AFDNQNHS-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
               +   IKL DFG +  + D++  + S   T  Y APEV+   G +   D WS G ++
Sbjct: 161 ---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 217
Query: 281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR 340
            E+ TG   FQ  +  E + M+ +A   +P+ +   A       F+R        G    
Sbjct: 218 FEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 277
Query: 341 ESIK 344
           E IK
Sbjct: 278 EEIK 281

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 133/304 (43%), Gaps = 49/304 (16%)
Query: 52  REGHYVFNLGENLTP-RYKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVR-SIRKYR 106
           +EGH      E   P ++++L  +G+G+FG+V    +      ++  A+KV++ +  K R
Sbjct: 15  KEGH------EKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVR 68
Query: 107 DAA--MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY 163
           D     +E D+L  +           V++   F     + ++ + L G  LF  L  +K 
Sbjct: 69  DRVRTKMERDILVEV------NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRL--SKE 120
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
             F  + V+ +  +L  ++ ++H L +I+ DLKPENILL                     
Sbjct: 121 VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL--------------------- 159
Query: 224 RCLPKSSAIKLIDFGST--AFDNQNHS-SIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
               +   IKL DFG +  + D++  + S   T  Y APEV+   G +   D WS G ++
Sbjct: 160 ---DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLM 216
Query: 281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR 340
            E+ TG   FQ  +  E + M+ +A   +P+ +   A       F+R        G    
Sbjct: 217 FEMLTGTLPFQGKDRKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGV 276
Query: 341 ESIK 344
           E IK
Sbjct: 277 EEIK 280

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 69/272 (25%), Positives = 117/272 (43%), Gaps = 59/272 (21%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA---------AMIEIDVLQ 117
           +Y  +S +G G FG V    D++  + V +K ++  +   D            +EI +L 
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSL--FDFLKRNKYCPFPVDLVREFG 175
            +        ++ +++ + F+ +    +V EK G  L  F F+ R+     P  L     
Sbjct: 85  RVEH------ANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEP--LASYIF 136
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           RQL+ +V Y+    +IH D+K ENI +++ +F                        IKLI
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENI-VIAEDF-----------------------TIKLI 172
Query: 236 DFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALF-Q 291
           DFGS A+  +     +   T  Y APEV++G  +  P  +MWS+G  L  L   E  F +
Sbjct: 173 DFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE 232
Query: 292 THENLEH------------LAMMERALGPLPE 311
             E +E             ++++   L P+PE
Sbjct: 233 LEETVEAAIHPPYLVSKELMSLVSGLLQPVPE 264

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 84/355 (23%), Positives = 150/355 (42%), Gaps = 95/355 (26%)
Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR------------- 100
           G YV      +   Y  + K+G G +G VL C ++      AIKV++             
Sbjct: 24  GMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDN 83
Query: 101 -SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFD-F 157
            +I K+ +    EI +L+ L         + +++ + F+ + +  +V E   G  LF+  
Sbjct: 84  KNIEKFHEEIYNEISLLKSL------DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI 137
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS 217
           + R+K+       +    +Q+L  + Y+H   ++H D+KPENILL +   +         
Sbjct: 138 INRHKFDECDAANIM---KQILSGICYLHKHNIVHRDIKPENILLENKNSL--------- 185
Query: 218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWS 275
                         IK++DFG ++F ++++     + T +Y APEV L   ++  CD+WS
Sbjct: 186 ------------LNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEV-LKKKYNEKCDVWS 232
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
            G I+  L  G   F                G   + +I++  +G  KY+   +  +W  
Sbjct: 233 CGVIMYILLCGYPPFG---------------GQNDQDIIKKVEKG--KYYFDFN--DW-- 271
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN 390
                            KN+     D A+    +L+  +L YD ++R TA +ALN
Sbjct: 272 -----------------KNI----SDEAK----ELIKLMLTYDYNKRCTAEEALN 301

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 100/225 (44%), Gaps = 23/225 (10%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           +K+ + +G+G+F  V       T   VAIK++     Y+ A M++  V   +  + +   
Sbjct: 13  FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYK-AGMVQ-RVQNEVKIHCQLKH 70
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
              +++ N+F+  N++ +V E       +   +N+  PF  +  R F  Q++  + Y+H 
Sbjct: 71  PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHS 130
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
             ++H DL   N+LL  +  IK+  +  ++  +MP                     ++ H
Sbjct: 131 HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP---------------------HEKH 169
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT 292
            ++  T +Y +PE+          D+WS+GC+   L  G   F T
Sbjct: 170 YTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT 214

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 43/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           ++ F   +L  +  +H+  ++H DL P NILL  +  I +  +  +              
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE------------ 183
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEAL 289
                    TA  N+ H   V+ R YRAPE+++   G++   DMWS GC++ E+   +AL
Sbjct: 184 --------DTADANKTH--YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233
Query: 290 FQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
           F+       L  +   +G P  E ++  +S     Y R  S  N P  A +     AV  
Sbjct: 234 FRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLR-NSLSNVPARAWT-----AV-- 285
Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                      V  A     DL+  +L ++P  R++  QAL HP+F +L
Sbjct: 286 -----------VPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/338 (23%), Positives = 133/338 (39%), Gaps = 81/338 (23%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN 122
             T  Y++   +G G++     C  + T    A+K+   I K +     EI++L      
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRY--- 72
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             G   + + +++ +D   ++ +V E + G  L D + R K+  F           + ++
Sbjct: 73  --GQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKT 128
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           V Y+H   ++H DLKP NIL V              SG       P+S  I++ DFG   
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDE------------SGN------PES--IRICDFGFAK 168
Query: 242 FDNQNHSSIVS---TRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
                +  +++   T ++ APEV+   G+   CD+WS+G +L  + TG   F        
Sbjct: 169 QLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF-------- 220
Query: 299 LAMMERALGP--LPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
                 A GP   PE ++ R   G+ K+   G   N                        
Sbjct: 221 ------ANGPDDTPEEILARI--GSGKFSLSGGYWN------------------------ 248
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                    T  DL+  +L  DP +RLTA   L HP+ 
Sbjct: 249 -----SVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 99/229 (43%), Gaps = 43/229 (18%)
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           ++ F   +L  +  +H+  ++H DL P NILL  +  I +  +  +              
Sbjct: 136 IQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLARE------------ 183
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEAL 289
                    TA  N+ H   V+ R YRAPE+++   G++   DMWS GC++ E+   +AL
Sbjct: 184 --------DTADANKTH--YVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKAL 233
Query: 290 FQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK 348
           F+       L  +   +G P  E ++  +S     Y R  S  N P  A +     AV  
Sbjct: 234 FRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLR-NSLSNVPARAWT-----AV-- 285
Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                      V  A     DL+  +L ++P  R++  QAL HP+F +L
Sbjct: 286 -----------VPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESL 323

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++ L  +G+GTFG+V+   ++ T    A+K+++     ++  + + +V   L +N    +
Sbjct: 150 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTENRVLQN 204
Query: 128 SH---CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
           S       ++  F   + +C V E   G  LF  L R +   F  D  R +G +++ ++ 
Sbjct: 205 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALD 262
Query: 184 YMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
           Y+H  + +++ DLK EN++L                         K   IK+ DFG    
Sbjct: 263 YLHSEKNVVYRDLKLENLML------------------------DKDGHIKITDFGLCKE 298
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D     +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 299 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 358
Query: 298 HLAMME-----RALGP 308
            L +ME     R LGP
Sbjct: 359 ELILMEEIRFPRTLGP 374

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 46/256 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++ L  +G+GTFG+V+   ++ T    A+K+++     ++  + + +V   L +N    +
Sbjct: 153 FEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTENRVLQN 207
Query: 128 SH---CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
           S       ++  F   + +C V E   G  LF  L R +   F  D  R +G +++ ++ 
Sbjct: 208 SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALD 265
Query: 184 YMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
           Y+H  + +++ DLK EN++L                         K   IK+ DFG    
Sbjct: 266 YLHSEKNVVYRDLKLENLML------------------------DKDGHIKITDFGLCKE 301
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D     +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 302 GIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 361
Query: 298 HLAMME-----RALGP 308
            L +ME     R LGP
Sbjct: 362 ELILMEEIRFPRTLGP 377

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 61/223 (27%), Positives = 99/223 (44%), Gaps = 39/223 (17%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           L ++G+G+FG V +  D +TQ+ VAIK++         +    EI VL          SS
Sbjct: 28  LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSS 81
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           +  +    +   + + I+ E LG  S  D L+   +  F +  +    +++L+ + Y+H 
Sbjct: 82  YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATML---KEILKGLDYLHS 138
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQ 245
            + IH D+K  N+LL             S  G+           +KL DFG      D Q
Sbjct: 139 EKKIHRDIKAANVLL-------------SEQGD-----------VKLADFGVAGQLTDTQ 174
Query: 246 -NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
              ++ V T  + APEVI    +    D+WS+G   +EL  GE
Sbjct: 175 IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 43/225 (19%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           L K+G+G+FG V +  D +TQ+ VAIK++         +    EI VL          S 
Sbjct: 12  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSP 65
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYM 185
           +  +    +     + I+ E LG  S  D L+     P P+D   +    R++L+ + Y+
Sbjct: 66  YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYL 120
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FD 243
           H  + IH D+K  N+LL             S  GE           +KL DFG      D
Sbjct: 121 HSEKKIHRDIKAANVLL-------------SEHGE-----------VKLADFGVAGQLTD 156
Query: 244 NQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
            Q   ++ V T  + APEVI    +    D+WS+G   +EL  GE
Sbjct: 157 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 142/360 (39%), Gaps = 91/360 (25%)
Query: 44  SPPRR-----DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKV 98
           +PPRR     D+D       +L +     + +L K+GEG++G V +   ++T + VAIK 
Sbjct: 9   NPPRRQLKKLDED-------SLTKQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQ 61
Query: 99  VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP-SLFDF 157
           V  +       + EI ++Q         S H V+    +     + IV E  G  S+ D 
Sbjct: 62  V-PVESDLQEIIKEISIMQQC------DSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDI 114
Query: 158 LK-RNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS 216
           ++ RNK      D +    +  L+ + Y+H +R IH D+K  NILL +    KL  +   
Sbjct: 115 IRLRNKT--LTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADF--- 169
Query: 217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSV 276
                         A +L D  +        + ++ T  + APEVI  +G++   D+WS+
Sbjct: 170 ------------GVAGQLTDXMA------KRNXVIGTPFWMAPEVIQEIGYNCVADIWSL 211
Query: 277 GCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEG 336
           G   +E+  G+  +     +  + M+     P P              FR+      PE 
Sbjct: 212 GITAIEMAEGKPPYADIHPMRAIFMI--PTNPPPT-------------FRK------PE- 249
Query: 337 AVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                L  D      TD +   L   P +R TA Q L HPF R+
Sbjct: 250 ---------------------LWSD----NFTDFVKQCLVKSPEQRATATQLLQHPFVRS 284

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 71.6 bits (174), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 114/265 (43%), Gaps = 47/265 (17%)
Query: 60  LGENLT-PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQH 118
           LG  +T   ++ L  +G+GTFG+V+   ++ T    A+K+++     ++  + + +V   
Sbjct: 1   LGSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHT 55
Query: 119 LAKNDKGGSS---HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREF 174
           L +N    +S       ++  F   + +C V E   G  LF  L R +   F  D  R +
Sbjct: 56  LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFY 113
Query: 175 GRQLLESVAYMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           G +++ ++ Y+H  + +++ DLK EN++L                         K   IK
Sbjct: 114 GAEIVSALDYLHSEKNVVYRDLKLENLML------------------------DKDGHIK 149
Query: 234 LIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           + DFG       D         T  Y APEV+    +    D W +G ++ E+  G   F
Sbjct: 150 ITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
Query: 291 --QTHENLEHLAMME-----RALGP 308
             Q HE L  L +ME     R LGP
Sbjct: 210 YNQDHEKLFELILMEEIRFPRTLGP 234

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 43/237 (18%)
Query: 59  NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVL 116
           NL  +    +  L K+G+G+FG V +  D +TQ+ VAIK++         +    EI VL
Sbjct: 15  NLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 74
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVD--LVRE 173
                     S +  +    +     + I+ E L G S  D L+     P P+D   +  
Sbjct: 75  SQC------DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIAT 123
Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
             R++L+ + Y+H  + IH D+K  N+LL             S  GE           +K
Sbjct: 124 ILREILKGLDYLHSEKKIHRDIKAANVLL-------------SEHGE-----------VK 159
Query: 234 LIDFGSTA--FDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           L DFG      D Q   +  V T  + APEVI    +    D+WS+G   +EL  GE
Sbjct: 160 LADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 63/223 (28%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           L ++G+G+FG V +  D  T+E VAIK++         +    EI VL          S 
Sbjct: 24  LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSP 77
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           +  +    +     + I+ E LG  S  D LK     P     +    R++L+ + Y+H 
Sbjct: 78  YITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG---PLEETYIATILREILKGLDYLHS 134
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQ 245
            R IH D+K  N+LL             S  G+           +KL DFG      D Q
Sbjct: 135 ERKIHRDIKAANVLL-------------SEQGD-----------VKLADFGVAGQLTDTQ 170
Query: 246 -NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
              +  V T  + APEVI    + +  D+WS+G   +EL  GE
Sbjct: 171 IKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 46/256 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++ L  +G+GTFG+V+   ++ T    A+K+++     ++  + + +V   L +N    +
Sbjct: 11  FEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTENRVLQN 65
Query: 128 S---HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
           S       ++  F   + +C V E   G  LF  L R +   F  D  R +G +++ ++ 
Sbjct: 66  SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALD 123
Query: 184 YMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
           Y+H  + +++ DLK EN++L                         K   IK+ DFG    
Sbjct: 124 YLHSEKNVVYRDLKLENLML------------------------DKDGHIKITDFGLCKE 159
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 160 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 219
Query: 298 HLAMME-----RALGP 308
            L +ME     R LGP
Sbjct: 220 ELILMEEIRFPRTLGP 235

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 110/256 (42%), Gaps = 46/256 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++ L  +G+GTFG+V+   ++ T    A+K+++     ++  + + +V   L +N    +
Sbjct: 12  FEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-----KEVIVAKDEVAHTLTENRVLQN 66
Query: 128 S---HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
           S       ++  F   + +C V E   G  LF  L R +   F  D  R +G +++ ++ 
Sbjct: 67  SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSALD 124
Query: 184 YMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
           Y+H  + +++ DLK EN++L                         K   IK+ DFG    
Sbjct: 125 YLHSEKNVVYRDLKLENLML------------------------DKDGHIKITDFGLCKE 160
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 161 GIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLF 220
Query: 298 HLAMME-----RALGP 308
            L +ME     R LGP
Sbjct: 221 ELILMEEIRFPRTLGP 236

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 98/225 (43%), Gaps = 43/225 (19%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           L K+G+G+FG V +  D +TQ+ VAIK++         +    EI VL          S 
Sbjct: 32  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSP 85
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYM 185
           +  +    +     + I+ E LG  S  D L+     P P+D   +    R++L+ + Y+
Sbjct: 86  YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYL 140
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FD 243
           H  + IH D+K  N+LL             S  GE           +KL DFG      D
Sbjct: 141 HSEKKIHRDIKAANVLL-------------SEHGE-----------VKLADFGVAGQLTD 176
Query: 244 NQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
            Q   ++ V T  + APEVI    +    D+WS+G   +EL  GE
Sbjct: 177 TQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 43/225 (19%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           L K+G+G+FG V +  D +TQ+ VAIK++         +    EI VL          S 
Sbjct: 12  LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC------DSP 65
Query: 129 HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYM 185
           +  +    +     + I+ E L G S  D L+     P P+D   +    R++L+ + Y+
Sbjct: 66  YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLE-----PGPLDETQIATILREILKGLDYL 120
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FD 243
           H  + IH D+K  N+LL             S  GE           +KL DFG      D
Sbjct: 121 HSEKKIHRDIKAANVLL-------------SEHGE-----------VKLADFGVAGQLTD 156
Query: 244 NQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
            Q   +  V T  + APEVI    +    D+WS+G   +EL  GE
Sbjct: 157 TQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 43/249 (17%)
Query: 52  REGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAM 110
           R   ++ N     +  Y +  ++G+G F  V  C  + T    A K++ + +   RD   
Sbjct: 15  RGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQK 74
Query: 111 IEIDV-----LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKY 163
           +E +      LQH          + V++ +     +   +VF+ + G  LF D + R  Y
Sbjct: 75  LEREARICRKLQH---------PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFY 125
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
                    +   Q+LES+AY H   ++H +LKPEN+LL S                   
Sbjct: 126 SEADASHCIQ---QILESIAYCHSNGIVHRNLKPENLLLASK------------------ 164
Query: 224 RCLPKSSAIKLIDFGST--AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILV 281
               K +A+KL DFG      D++       T  Y +PEV+    +S P D+W+ G IL 
Sbjct: 165 ---AKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILY 221
Query: 282 ELCTGEALF 290
            L  G   F
Sbjct: 222 ILLVGYPPF 230

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 41/230 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--- 124
           ++IL  +G G+FGRV     R      A+KV++         ++ +  ++H   ND+   
Sbjct: 8   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK------EIVVRLKQVEH--TNDERLM 59
Query: 125 -GGSSHCVQIRNWFDYRN--HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
               +H   IR W  +++   I ++ + + G  LF  L++++  P PV   + +  ++  
Sbjct: 60  LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPV--AKFYAAEVCL 117
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           ++ Y+H   +I+ DLKPENIL                        L K+  IK+ DFG  
Sbjct: 118 ALEYLHSKDIIYRDLKPENIL------------------------LDKNGHIKITDFGFA 153
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
            +       +  T  Y APEV+    ++   D WS G ++ E+  G   F
Sbjct: 154 KYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score = 70.5 bits (171), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 133/339 (39%), Gaps = 80/339 (23%)
Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQH 118
            E++   ++    +G G F  V+   ++ T +  A+K +  ++++    +   EI VL+ 
Sbjct: 17  AEDIKKIFEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQ 177
           +   +       V + + ++  NH+ +V + + G  LFD +    +  +         RQ
Sbjct: 77  IKHEN------IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTLIRQ 128
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +L++V Y+H + ++H DLKPEN+L  S +                     + S I + DF
Sbjct: 129 VLDAVYYLHRMGIVHRDLKPENLLYYSQD---------------------EESKIMISDF 167
Query: 238 GSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           G +  + +    S+   T  Y APEV+    +S   D WS+G I   L  G   F     
Sbjct: 168 GLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF----- 222
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
                                       Y    S+L         + +KA  + D     
Sbjct: 223 ----------------------------YDENDSKL-------FEQILKAEYEFD----- 242
Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            S + D    +  D +  L+  DP++R T  QA  HP+ 
Sbjct: 243 -SPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWI 280

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 47/256 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
           +  L  +G+GTFG+V+   ++ T    A+K++R         +I  D + H     +   
Sbjct: 10  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 63
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            + H     ++  F   + +C V E   G  LF  L R +   F  +  R +G +++ ++
Sbjct: 64  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
            Y+H   +++ D+K EN++                        L K   IK+ DFG    
Sbjct: 122 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 157
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D     +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 158 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 217
Query: 298 HLAMME-----RALGP 308
            L +ME     R L P
Sbjct: 218 ELILMEEIRFPRTLSP 233

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 47/256 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
           +  L  +G+GTFG+V+   ++ T    A+K++R         +I  D + H     +   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 60
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            + H     ++  F   + +C V E   G  LF  L R +   F  +  R +G +++ ++
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
            Y+H   +++ D+K EN++                        L K   IK+ DFG    
Sbjct: 119 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 154
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D     +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 155 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 298 HLAMME-----RALGP 308
            L +ME     R L P
Sbjct: 215 ELILMEEIRFPRTLSP 230

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/256 (24%), Positives = 105/256 (41%), Gaps = 47/256 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
           +  L  +G+GTFG+V+   ++ T    A+K++R         +I  D + H     +   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 60
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            + H     ++  F   + +C V E   G  LF  L R +   F  +  R +G +++ ++
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
            Y+H   +++ D+K EN++                        L K   IK+ DFG    
Sbjct: 119 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 154
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D     +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 155 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 298 HLAMME-----RALGP 308
            L +ME     R L P
Sbjct: 215 ELILMEEIRFPRTLSP 230

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 63/221 (28%), Positives = 97/221 (43%), Gaps = 35/221 (15%)
Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIE--IDVLQHLAKNDKGGSSHC 130
           K+G G FG V    +R +     IK +   R       IE  I+VL+ L         + 
Sbjct: 29  KLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL------DHPNI 82
Query: 131 VQIRNWFDYRNHICIVFEKL-GPSLFDFL--KRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           ++I   F+  +++ IV E   G  L + +   + +        V E  +Q++ ++AY H 
Sbjct: 83  IKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS 142
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
             ++H DLKPENIL                     F+     S IK+IDFG +  F +  
Sbjct: 143 QHVVHKDLKPENIL---------------------FQDTSPHSPIKIIDFGLAELFKSDE 181
Query: 247 HSS-IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           HS+    T  Y APEV      ++ CD+WS G ++  L TG
Sbjct: 182 HSTNAAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTG 221

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/271 (23%), Positives = 114/271 (42%), Gaps = 47/271 (17%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E     Y++   +G+G FG V        + +VAIKV+   R        D+    ++V 
Sbjct: 27  EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS--LFDFLKRNKYCPFPVDLVREF 174
                   GG    +++ +WF+ +    +V E+  P+  LFD++      P      R F
Sbjct: 87  LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCF 144
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q++ ++ + H   ++H D+K ENIL+           +R  +              KL
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILI---------DLRRGCA--------------KL 181
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQ- 291
           IDFGS A   ++ ++    TR Y  PE I    + + P  +WS+G +L ++  G+  F+ 
Sbjct: 182 IDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER 241
Query: 292 ------------THENLEHLAMMERALGPLP 310
                        H + +  A++ R L P P
Sbjct: 242 DQEILEAELHFPAHVSPDCCALIRRCLAPKP 272

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 109/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 4   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E++ P   LFDF+          +L R F
Sbjct: 64  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERG--ALQEELARSF 119
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 156
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 157 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
Query: 293 HENL 296
            E +
Sbjct: 217 DEEI 220

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 129/338 (38%), Gaps = 81/338 (23%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN 122
             T  Y++   +G G++     C  + T    A+K+   I K +     EI++L      
Sbjct: 19  QFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKI---IDKSKRDPTEEIEILLRY--- 72
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             G   + + +++ +D   ++ +V E   G  L D + R K+  F           + ++
Sbjct: 73  --GQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF--FSEREASAVLFTITKT 128
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           V Y+H   ++H DLKP NIL V              SG       P+S  I++ DFG   
Sbjct: 129 VEYLHAQGVVHRDLKPSNILYVDE------------SGN------PES--IRICDFGFAK 168
Query: 242 ---FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
               +N    +   T ++ APEV+   G+   CD+WS+G +L    TG   F        
Sbjct: 169 QLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF-------- 220
Query: 299 LAMMERALGP--LPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
                 A GP   PE ++ R   G+ K+   G   N                        
Sbjct: 221 ------ANGPDDTPEEILARI--GSGKFSLSGGYWN------------------------ 248
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                    T  DL+   L  DP +RLTA   L HP+ 
Sbjct: 249 -----SVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 92/376 (24%), Positives = 153/376 (40%), Gaps = 78/376 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHLAKNDK 124
           Y+I   +G G++G V   +D+   + VAIK V R      D   I  EI +L  L K+D 
Sbjct: 30  YEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRL-KSDY 88
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV-- 182
               H + I       + + IV E     L    K       P+ L  +  + +L ++  
Sbjct: 89  IIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKT------PIFLTEQHVKTILYNLLL 142
Query: 183 --AYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDFG 238
              ++H+  +IH DLKP N LL     +K+   G  R+ + +     +      +  +  
Sbjct: 143 GEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEP 202
Query: 239 STAFDN--QNHSSIVSTRHYRAPEVI-LGLGWSYPCDMWSVGCILVELCT---------- 285
                N  +  +S V TR YRAPE+I L   ++   D+WS GCI  EL            
Sbjct: 203 GPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPT 262
Query: 286 -------GEALF---------QTHE--NLEHLAMMERALGPLPEHMIRRASRG-TEKYF- 325
                  G + F         + HE  N + L ++   +G  PE  ++  ++    KY  
Sbjct: 263 NRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKYIK 322
Query: 326 ----RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE 381
               R G  L+    ++S+E I                         DLL  +LR++  +
Sbjct: 323 LFPTRDGIDLSKKYSSISKEGI-------------------------DLLESMLRFNAQK 357
Query: 382 RLTARQALNHPFFRNL 397
           R+T  +AL+HP+ +++
Sbjct: 358 RITIDKALSHPYLKDV 373

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
           +  L  +G+GTFG+V+   ++ T    A+K++R         +I  D + H     +   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 60
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            + H     ++  F   + +C V E   G  LF  L R +   F  +  R +G +++ ++
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
            Y+H   +++ D+K EN++                        L K   IK+ DFG    
Sbjct: 119 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 154
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 155 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 298 HLAMMERALGP 308
            L +ME    P
Sbjct: 215 ELILMEEIRFP 225

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
           +  L  +G+GTFG+V+   ++ T    A+K++R         +I  D + H     +   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 60
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            + H     ++  F   + +C V E   G  LF  L R +   F  +  R +G +++ ++
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
            Y+H   +++ D+K EN++                        L K   IK+ DFG    
Sbjct: 119 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 154
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 155 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 298 HLAMMERALGP 308
            L +ME    P
Sbjct: 215 ELILMEEIRFP 225

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
           +  L  +G+GTFG+V+   ++ T    A+K++R         +I  D + H     +   
Sbjct: 12  FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 65
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            + H     ++  F   + +C V E   G  LF  L R +   F  +  R +G +++ ++
Sbjct: 66  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 123
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
            Y+H   +++ D+K EN++                        L K   IK+ DFG    
Sbjct: 124 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 159
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 160 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 219
Query: 298 HLAMMERALGP 308
            L +ME    P
Sbjct: 220 ELILMEEIRFP 230

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/251 (24%), Positives = 102/251 (40%), Gaps = 42/251 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK--G 125
           +  L  +G+GTFG+V+   ++ T    A+K++R         +I  D + H     +   
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRK------EVIIAKDEVAHTVTESRVLQ 60
Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            + H     ++  F   + +C V E   G  LF  L R +   F  +  R +G +++ ++
Sbjct: 61  NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVSAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
            Y+H   +++ D+K EN++                        L K   IK+ DFG    
Sbjct: 119 EYLHSRDVVYRDIKLENLM------------------------LDKDGHIKITDFGLCKE 154
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
              D         T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L 
Sbjct: 155 GISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLF 214
Query: 298 HLAMMERALGP 308
            L +ME    P
Sbjct: 215 ELILMEEIRFP 225

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 52  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 111
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 112 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 167
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 168 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 204
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 205 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 264
Query: 293 HENL 296
            E +
Sbjct: 265 DEEI 268

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 92  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 147
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 184
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 185 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 293 HENL 296
            E +
Sbjct: 245 DEEI 248

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 92  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 147
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 184
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 185 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 293 HENL 296
            E +
Sbjct: 245 DEEI 248

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 39  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 98
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 99  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 154
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 155 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 191
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 192 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 251
Query: 293 HENL 296
            E +
Sbjct: 252 DEEI 255

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 93  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 148
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 185
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 186 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 293 HENL 296
            E +
Sbjct: 246 DEEI 249

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 47  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 107 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 162
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 199
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 200 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
Query: 293 HENL 296
            E +
Sbjct: 260 DEEI 263

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 93  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 148
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 185
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 186 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 293 HENL 296
            E +
Sbjct: 246 DEEI 249

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 92  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 147
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 184
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 185 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 293 HENL 296
            E +
Sbjct: 245 DEEI 248

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 19  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 79  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 134
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 171
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 172 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
Query: 293 HENL 296
            E +
Sbjct: 232 DEEI 235

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 93  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 148
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 185
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 186 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 293 HENL 296
            E +
Sbjct: 246 DEEI 249

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 32  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 91
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 92  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 147
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 148 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 184
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 185 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 244
Query: 293 HENL 296
            E +
Sbjct: 245 DEEI 248

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 80  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 135
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 172
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 173 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 293 HENL 296
            E +
Sbjct: 233 DEEI 236

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 19  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 78
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 79  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 134
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 135 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 171
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 172 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 231
Query: 293 HENL 296
            E +
Sbjct: 232 DEEI 235

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 33  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 92
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 93  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 148
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 149 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 185
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 186 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 245
Query: 293 HENL 296
            E +
Sbjct: 246 DEEI 249

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 47  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 106
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 107 --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 162
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 163 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 199
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 200 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 259
Query: 293 HENL 296
            E +
Sbjct: 260 DEEI 263

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 80  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 135
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 172
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 173 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 293 HENL 296
            E +
Sbjct: 233 DEEI 236

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 20  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 79
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 80  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 135
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 136 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 172
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 173 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 232
Query: 293 HENL 296
            E +
Sbjct: 233 DEEI 236

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 65  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 120
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 157
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 158 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
Query: 293 HENL 296
            E +
Sbjct: 218 DEEI 221

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 65  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 120
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 157
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 158 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
Query: 293 HENL 296
            E +
Sbjct: 218 DEEI 221

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 27  EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 86
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 87  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 142
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 143 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 179
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 180 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 239
Query: 293 HENL 296
            E +
Sbjct: 240 DEEI 243

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 5   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 64
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 65  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 120
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 121 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 157
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 158 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 217
Query: 293 HENL 296
            E +
Sbjct: 218 DEEI 221

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 4   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 63
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 64  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 119
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 156
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 157 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 216
Query: 293 HENL 296
            E +
Sbjct: 217 DEEI 220

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/244 (26%), Positives = 108/244 (44%), Gaps = 36/244 (14%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVL 116
           E L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+
Sbjct: 3   EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV 62
Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREF 174
             L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F
Sbjct: 63  --LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSF 118
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+V + H+  ++H D+K ENIL+              + GE+           KL
Sbjct: 119 FWQVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KL 155
Query: 235 IDFGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT 292
           IDFGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+ 
Sbjct: 156 IDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH 215
Query: 293 HENL 296
            E +
Sbjct: 216 DEEI 219

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 98/235 (41%), Gaps = 36/235 (15%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLA 120
           ++T  Y++  ++G+G F  V  C    T +  A K++ + +   RD   +E +  +  L 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQL 178
           K+      H       F Y     +VF+ + G  LF D + R  Y         +   Q+
Sbjct: 61  KHPNIVRLHDSISEEGFHY-----LVFDLVTGGELFEDIVAREYYSEADASHCIQ---QI 112
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           LESV + H   ++H DLKPEN+LL S                       K +A+KL DFG
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKS---------------------KGAAVKLADFG 151
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
                  D Q       T  Y +PEV+    +  P DMW+ G IL  L  G   F
Sbjct: 152 LAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 36/235 (15%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLA 120
           ++T  Y++   +G+G F  V  C    T    A K++ + +   RD   +E +  +  L 
Sbjct: 1   SMTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQL 178
           K+     S+ V++ +         +VF+ + G  LF D + R  Y         +   Q+
Sbjct: 61  KH-----SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQ---QI 112
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           LE+V + H + ++H DLKPEN+LL S                   +C  K +A+KL DFG
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLAS-------------------KC--KGAAVKLADFG 151
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
                  D Q       T  Y +PEV+    +  P D+W+ G IL  L  G   F
Sbjct: 152 LAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF 206

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 104/236 (44%), Gaps = 42/236 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           RY+++  +G G FG      D+Q+ E VA+K +   R  + AA ++ +++ H +      
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIE--RGEKIAANVKREIINHRSLR---- 73
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP---FPVDLVREFGRQLLESV 182
             + V+ +       H+ IV E   G  LF+     + C    F  D  R F +QL+  V
Sbjct: 74  HPNIVRFKEVILTPTHLAIVMEYASGGELFE-----RICNAGRFSEDEARFFFQQLISGV 128
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
           +Y H +++ H DLK EN LL  S   +L                      K+ DFG   S
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRL----------------------KICDFGYSKS 166
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
           +   +Q  S+ V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 167 SVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 110/257 (42%), Gaps = 53/257 (20%)
Query: 58  FNLGENLTPRYKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA---AMIEI 113
           F   EN    Y + SK +G G F  V +C  + T +  A K ++  R+ +D     + EI
Sbjct: 20  FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEI 79
Query: 114 DVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG---------PSLFDFLKRNKYC 164
            VL+ LAK+        + +   ++  + I ++ E            P L + +  N   
Sbjct: 80  AVLE-LAKS----CPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSEN--- 131
Query: 165 PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR 224
               D++R   +Q+LE V Y+H   ++H DLKP+NILL S                    
Sbjct: 132 ----DVIR-LIKQILEGVYYLHQNNIVHLDLKPQNILLSS-------------------- 166
Query: 225 CLPKSSAIKLIDFGSTAFDNQNHS----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
            +     IK++DFG +      H+     I+ T  Y APE++     +   DMW++G I 
Sbjct: 167 -IYPLGDIKIVDFGMSR--KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223
Query: 281 VELCTGEALFQTHENLE 297
             L T  + F   +N E
Sbjct: 224 YMLLTHTSPFVGEDNQE 240

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/235 (28%), Positives = 98/235 (41%), Gaps = 36/235 (15%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLA 120
           ++T  Y++  ++G+G F  V  C    T +  A K++ + +   RD   +E +  +  L 
Sbjct: 1   SMTDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLL 60
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQL 178
           K+      H       F Y     +VF+ + G  LF D + R  Y         +   Q+
Sbjct: 61  KHPNIVRLHDSISEEGFHY-----LVFDLVTGGELFEDIVAREYYSEADASHCIQ---QI 112
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           LESV + H   ++H DLKPEN+LL S                       K +A+KL DFG
Sbjct: 113 LESVNHCHLNGIVHRDLKPENLLLASKS---------------------KGAAVKLADFG 151
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
                  D Q       T  Y +PEV+    +  P DMW+ G IL  L  G   F
Sbjct: 152 LAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 148/369 (40%), Gaps = 97/369 (26%)
Query: 30  VGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQ 89
           V HE   AA    VSP    D RE  Y+ N             K+GEG+ G V    ++ 
Sbjct: 25  VSHEQFRAALQLVVSP---GDPRE--YLANF-----------IKIGEGSTGIVCIATEKH 68
Query: 90  TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK 149
           T ++VA+K +   ++ R   +    V+     +D     + V + + +   + + +V E 
Sbjct: 69  TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHD-----NVVDMYSSYLVGDELWVVMEF 123
Query: 150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI 208
           L G +L D +   +      + +      +L +++Y+H+  +IH D+K ++ILL S   I
Sbjct: 124 LEGGALTDIVTHTRMNE---EQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRI 180
Query: 209 KLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG 266
           KL   G+    S E+P R                         +V T ++ APEVI  L 
Sbjct: 181 KLSDFGFCAQVSKEVPKR-----------------------KXLVGTPYWMAPEVISRLP 217
Query: 267 WSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFR 326
           +    D+WS+G +++E+  GE  +     L+ +  +  +L P                  
Sbjct: 218 YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPP------------------ 259
Query: 327 RGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTAR 386
                                   R+K++      +  S L   L  +L  +PS+R TA+
Sbjct: 260 ------------------------RVKDL-----HKVSSVLRGFLDLMLVREPSQRATAQ 290
Query: 387 QALNHPFFR 395
           + L HPF +
Sbjct: 291 ELLGHPFLK 299

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 79/334 (23%), Positives = 130/334 (38%), Gaps = 99/334 (29%)
Query: 68  YKILSK-MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           YK+ S+ +G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q         
Sbjct: 19  YKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQ--------- 69
Query: 127 SSHCVQI----RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             H V+I     N +  R  + IV E L G  LF  ++      F      E  + + E+
Sbjct: 70  CPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H + + H D+KPEN+L  S    K P                 ++ +KL DFG   
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTS----KRP-----------------NAILKLTDFG--- 165
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
           F  +                  G  +   CDMWS+G I+  L  G   F ++  L     
Sbjct: 166 FAKET----------------TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGL----- 204
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGS-RLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
              A+ P           G +   R G      PE +   E +K                
Sbjct: 205 ---AISP-----------GMKTRIRMGQYEFPNPEWSEVSEEVKM--------------- 235
Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                    L+  LL+ +P++R+T  + +NHP+ 
Sbjct: 236 ---------LIRNLLKTEPTQRMTITEFMNHPWI 260

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+    ++T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+    ++T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+    ++T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQH 118
           L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+  
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-- 59
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGR 176
           L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F  
Sbjct: 60  LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 117
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+LE+V + H+  ++H D+K ENIL+              + GE+           KLID
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILI------------DLNRGEL-----------KLID 154
Query: 237 FGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
           FGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+  E
Sbjct: 155 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 295 NL 296
            +
Sbjct: 215 EI 216

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +++ +  +G G+FGRV+    ++T    A+K++   +      ++++  ++H     +  
Sbjct: 43  QFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------VVKLKQIEHTLNEKRIQ 96
Query: 127 SS----HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
            +      V++   F   +++ +V E   G  +F  L+R     F     R +  Q++ +
Sbjct: 97  QAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  IK+ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IKVADFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQH 118
           L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+  
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-- 59
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGR 176
           L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F  
Sbjct: 60  LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 117
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+LE+V + H+  ++H D+K ENIL+              + GE+           KLID
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KLID 154
Query: 237 FGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
           FGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+  E
Sbjct: 155 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 295 NL 296
            +
Sbjct: 215 EI 216

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+    ++T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 63  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 119
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 120 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 174
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 175 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 210
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
                   +  T  Y APE+IL  G++   D W++G ++ E+  G   F
Sbjct: 211 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 107/242 (44%), Gaps = 36/242 (14%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQH 118
           L  +Y++   +G G FG V           VAIK V   R     +  +   + ++V+  
Sbjct: 2   LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVV-- 59
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGR 176
           L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F  
Sbjct: 60  LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 117
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+LE+V + H+  ++H D+K ENIL+              + GE+           KLID
Sbjct: 118 QVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KLID 154
Query: 237 FGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
           FGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+  E
Sbjct: 155 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 214
Query: 295 NL 296
            +
Sbjct: 215 EI 216

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+    ++T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+    ++T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+    ++T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  IK+ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IKVADFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+    ++T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E   G  +F  L+R     F     R +  Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN++      I   GY                  IK+ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  IK+ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IKVADFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 134/347 (38%), Gaps = 77/347 (22%)
Query: 68  YKILSKM-GEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMIEIDVLQHLAKNDKG 125
           YK+ S++ GEG + +V      Q  +  A+K++ +     R     E++ L         
Sbjct: 14  YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQ----- 68
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
           G+ + +++  +F+      +VFEKL G S+   +++ K+  F         R +  ++ +
Sbjct: 69  GNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDF 126
Query: 185 MHDLRLIHTDLKPENILLVSSEF---IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           +H   + H DLKPENIL  S E    +K+  +   S  ++   C P ++       GS  
Sbjct: 127 LHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSA- 185
Query: 242 FDNQNHSSIVSTRHYRAPEVI-----LGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                         Y APEV+         +   CD+WS+G +L  + +G   F  H   
Sbjct: 186 -------------EYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGH--- 229
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR-------ESIKAVKKL 349
                                          G+   W  G V R       ESI+  K  
Sbjct: 230 ------------------------------CGADCGWDRGEVCRVCQNKLFESIQEGKYE 259
Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
              K+   +      S   DL+  LL  D  +RL+A Q L HP+ + 
Sbjct: 260 FPDKDWAHI-----SSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQG 301

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+    ++T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 35  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 91
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 92  ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 146
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 147 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 182
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 183 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                  ++  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 58/241 (24%), Positives = 109/241 (45%), Gaps = 43/241 (17%)
Query: 57  VFNLGENLT-PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMI 111
           VF+  E++    ++IL  +G+G+FG+V       T++  A+K +       R        
Sbjct: 5   VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64
Query: 112 EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH---ICIVFEKLGPSLFDFLKRNKYCPFPV 168
           E+ ++Q        G  H   +  W+ +++      +V   LG  L   L++N +  F  
Sbjct: 65  ELQIMQ--------GLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKE 114
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
           + V+ F  +L+ ++ Y+ + R+IH D+KP+NILL     + +  +  ++        LP+
Sbjct: 115 ETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAA-------MLPR 167
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILVELCT 285
            + I               +++  T+ Y APE+     G G+S+  D WS+G    EL  
Sbjct: 168 ETQI---------------TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR 212
Query: 286 G 286
           G
Sbjct: 213 G 213

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  IK+ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IKVADFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+    ++T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 35  QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 91
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 92  ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 146
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 147 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 182
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
                   +  T  Y APE+IL  G++   D W++G ++ E+  G   F
Sbjct: 183 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 47/239 (19%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKN 122
            +  Y +  ++G+G F  V  C  + T    A K++ + +   RD   +E +        
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-------- 55
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG------- 175
               +  C ++++    R H  I  E     +FD +   +   F   + REF        
Sbjct: 56  ----ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASH 109
Query: 176 --RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
             +Q+LES+AY H   ++H +LKPEN+LL S                       K +A+K
Sbjct: 110 CIQQILESIAYCHSNGIVHRNLKPENLLLASK---------------------AKGAAVK 148
Query: 234 LIDFGST--AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           L DFG      D++       T  Y +PEV+    +S P D+W+ G IL  L  G   F
Sbjct: 149 LADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 37/248 (14%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
               +  T  Y APE+IL  G++   D W++G ++ E+  G   F   E ++    +   
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIYEKIVSG 253
Query: 306 LGPLPEHM 313
               P H 
Sbjct: 254 KVRFPSHF 261

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 154/379 (40%), Gaps = 79/379 (20%)
Query: 63  NLTPRYKILSKMGEGTFGRV-LECWDRQT--QERVAIK-VVRSIRKYRDAAMIEIDVLQH 118
            L+  +KI  K+GEGTF  V L     Q   +E++A+K ++ +    R AA ++   +  
Sbjct: 18  QLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTV-- 75
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQ 177
                 GG  + + ++  F   +H+ I    L   S  D L    +       VRE+   
Sbjct: 76  -----AGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSF-----QEVREYMLN 125
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           L +++  +H   ++H D+KP N L       +L  Y     G          + I+L+ F
Sbjct: 126 LFKALKRIHQFGIVHRDVKPSNFLYNR----RLKKYALVDFG---LAQGTHDTKIELLKF 178
Query: 238 GSTAFD----NQNHSSIVSTRH-----------YRAPEVILGL-GWSYPCDMWSVGCILV 281
             +       +QN  SI  +R            +RAPEV+      +   DMWS G I +
Sbjct: 179 VQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFL 238
Query: 282 ELCTGE-ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR 340
            L +G    ++  ++L  LA +          M  R SR T +  +   +       V  
Sbjct: 239 SLLSGRYPFYKASDDLTALAQI----------MTIRGSRETIQAAKTFGKSILCSKEVPA 288
Query: 341 ESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG---------------------LLRYDP 379
           + ++  K  +RL+ M     D +   LT  + G                     LL  +P
Sbjct: 289 QDLR--KLCERLRGM-----DSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNP 341
Query: 380 SERLTARQALNHPFFRNLN 398
           + R+TA +AL HPFF++++
Sbjct: 342 ASRITAEEALLHPFFKDMS 360

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 67  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 120
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 178
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 179 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 214
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
              ++  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 215 ATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 104/244 (42%), Gaps = 44/244 (18%)
Query: 59  NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEID 114
           ++G N    ++I  K+G G F  V           VA+K V+       K R   + EID
Sbjct: 25  DMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEID 84
Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE-----KLGPSLFDFLKRNKYCPFPVD 169
           +L+ L         + ++    F   N + IV E      L   +  F K+ +    P  
Sbjct: 85  LLKQL------NHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRL--IPER 136
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
            V ++  QL  ++ +MH  R++H D+KP N+ + ++                        
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITAT------------------------ 172
Query: 230 SAIKLIDFGSTAFDNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
             +KL D G   F +   +   S+V T +Y +PE I   G+++  D+WS+GC+L E+   
Sbjct: 173 GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 232
Query: 287 EALF 290
           ++ F
Sbjct: 233 QSPF 236

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 47/239 (19%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKN 122
            +  Y +  ++G+G F  V  C  + T    A K++ + +   RD   +E +        
Sbjct: 4   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-------- 55
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG------- 175
               +  C ++++    R H  I  E     +FD +   +   F   + REF        
Sbjct: 56  ----ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASH 109
Query: 176 --RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
             +Q+LES+AY H   ++H +LKPEN+LL S                       K +A+K
Sbjct: 110 CIQQILESIAYCHSNGIVHRNLKPENLLLASK---------------------AKGAAVK 148
Query: 234 LIDFGST--AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           L DFG      D++       T  Y +PEV+    +S P D+W+ G IL  L  G   F
Sbjct: 149 LADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 99/239 (41%), Gaps = 47/239 (19%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKN 122
            +  Y +  ++G+G F  V  C  + T    A K++ + +   RD   +E +        
Sbjct: 3   FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLERE-------- 54
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG------- 175
               +  C ++++    R H  I  E     +FD +   +   F   + REF        
Sbjct: 55  ----ARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGEL--FEDIVAREFYSEADASH 108
Query: 176 --RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
             +Q+LES+AY H   ++H +LKPEN+LL S                       K +A+K
Sbjct: 109 CIQQILESIAYCHSNGIVHRNLKPENLLLASK---------------------AKGAAVK 147
Query: 234 LIDFGST--AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           L DFG      D++       T  Y +PEV+    +S P D+W+ G IL  L  G   F
Sbjct: 148 LADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 101/229 (44%), Gaps = 37/229 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 28  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 84
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 85  ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 139
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 140 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 175
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
                  ++  T  Y APE+IL  G++   D W++G ++ E+  G   F
Sbjct: 176 RVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 126/337 (37%), Gaps = 82/337 (24%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLAK 121
            T  Y++  ++G+G F  V  C  +   +  A K++ + +   RD   +E +  +  L K
Sbjct: 29  FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLK 88
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQLL 179
           +      H       F Y     +VF+ + G  LF D + R  Y             Q+L
Sbjct: 89  HPNIVRLHDSISEEGFHY-----LVFDLVTGGELFEDIVAREYYSEADAS---HCIHQIL 140
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           ESV ++H   ++H DLKPEN+LL S                   +C  K +A+KL DFG 
Sbjct: 141 ESVNHIHQHDIVHRDLKPENLLLAS-------------------KC--KGAAVKLADFGL 179
Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                 + Q       T  Y +PEV+    +  P D+W+ G IL  L  G   F   +  
Sbjct: 180 AIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQH 239
Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           +    ++      P                       PE                     
Sbjct: 240 KLYQQIKAGAYDFPS----------------------PEW-------------------- 257
Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
               D       +L++ +L  +P++R+TA QAL HP+
Sbjct: 258 ----DTVTPEAKNLINQMLTINPAKRITADQALKHPW 290

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E   G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN++      I   GY                  IK+ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 100 ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 99/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFAEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 47  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 100
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 158
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 159 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 194
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 195 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 41/218 (18%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G FG V  C  +   + VAIK + S    R A ++E+  L  +        +H   +
Sbjct: 17  VGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV--------NHPNIV 65
Query: 134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL-VREFGRQLLESVAYMHDLR-- 189
           + +    N +C+V E   G SL++ L   +  P+        +  Q  + VAY+H ++  
Sbjct: 66  KLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 190 -LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH- 247
            LIH DLKP N+LLV+                         + +K+ DFG TA D Q H 
Sbjct: 126 ALIHRDLKPPNLLLVAG-----------------------GTVLKICDFG-TACDIQTHM 161
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           ++   +  + APEV  G  +S  CD++S G IL E+ T
Sbjct: 162 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 199

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 107/229 (46%), Gaps = 34/229 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++++  +G GT+G+V +    +T +  AIKV+       +    EI++L+  + +    +
Sbjct: 26  FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIAT 85
Query: 128 SHCVQIR-NWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
            +   I+ N     + + +V E  G  S+ D +K  K      + +    R++L  ++++
Sbjct: 86  YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHL 145
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H  ++IH D+K +N+LL                         +++ +KL+DFG +A  ++
Sbjct: 146 HQHKVIHRDIKGQNVLLT------------------------ENAEVKLVDFGVSAQLDR 181
Query: 246 N---HSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTG 286
                ++ + T ++ APEVI         + +  D+WS+G   +E+  G
Sbjct: 182 TVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEG 230

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 100/218 (45%), Gaps = 41/218 (18%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G FG V  C  +   + VAIK + S    R A ++E+  L  +        +H   +
Sbjct: 16  VGRGAFGVV--CKAKWRAKDVAIKQIES-ESERKAFIVELRQLSRV--------NHPNIV 64
Query: 134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL-VREFGRQLLESVAYMHDLR-- 189
           + +    N +C+V E   G SL++ L   +  P+        +  Q  + VAY+H ++  
Sbjct: 65  KLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 190 -LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH- 247
            LIH DLKP N+LLV+                         + +K+ DFG TA D Q H 
Sbjct: 125 ALIHRDLKPPNLLLVAG-----------------------GTVLKICDFG-TACDIQTHM 160
Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           ++   +  + APEV  G  +S  CD++S G IL E+ T
Sbjct: 161 TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 198

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 67  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 120
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 178
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 179 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 214
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 215 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/361 (22%), Positives = 143/361 (39%), Gaps = 88/361 (24%)
Query: 44  SPPRRDDDREGHYVFNLGENLT-----PRYKI--LSKMGEGTFGRVLECWDRQTQERVAI 96
           S P+R+  R  H  F     L      PR  +    K+GEG+ G V     R + + VA+
Sbjct: 2   SSPQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAV 61
Query: 97  KVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF 155
           K +   ++ R   +    V+    +++     + V++ N +   + + +V E L G +L 
Sbjct: 62  KKMDLRKQQRRELLFNEVVIMRDYQHE-----NVVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 156 DFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GY 213
           D +   +      + +      +L++++ +H   +IH D+K ++ILL     +KL   G+
Sbjct: 117 DIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGF 173
Query: 214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDM 273
               S E+P R                         +V T ++ APE+I  L +    D+
Sbjct: 174 CAQVSKEVPRR-----------------------KXLVGTPYWMAPELISRLPYGPEVDI 210
Query: 274 WSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW 333
           WS+G +++E+  GE  +     L+ + M+   L P                         
Sbjct: 211 WSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP------------------------- 245
Query: 334 PEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                            RLKN   LH  +   +L   L  LL  DP++R TA + L HPF
Sbjct: 246 -----------------RLKN---LH--KVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 283
Query: 394 F 394
Sbjct: 284 L 284

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/236 (27%), Positives = 101/236 (42%), Gaps = 42/236 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           RY+++  +G G FG      D+Q+ E VA+K +    K      I+ +V + +  +    
Sbjct: 19  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK------IDENVKREIINHRSLR 72
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP---FPVDLVREFGRQLLESV 182
             + V+ +       H+ IV E   G  LF+     + C    F  D  R F +QL+  V
Sbjct: 73  HPNIVRFKEVILTPTHLAIVMEYASGGELFE-----RICNAGRFSEDEARFFFQQLISGV 127
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
           +Y H +++ H DLK EN LL  S   +L                      K+ DFG   S
Sbjct: 128 SYCHAMQVCHRDLKLENTLLDGSPAPRL----------------------KICDFGYSKS 165
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
           +   +Q  S+ V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 166 SVLHSQPKST-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 220

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDA--AMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++  + + K ++    + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E   G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN++      I   GY                  IK+ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGLAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/225 (24%), Positives = 98/225 (43%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E   G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN++      I   GY                  IK+ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 41/252 (16%)
Query: 69  KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           K+  K+G G FG V +  +++ T  +VA+K ++      +A + E +V++ L ++DK   
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVK 247
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
            H V  +        I I+ E +   SL DFLK ++    P+  + +F  Q+ E +A++ 
Sbjct: 248 LHAVVTKE------PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQ 245
               IH DL+  NIL+ +S                   C       K+ DFG +   ++ 
Sbjct: 302 QRNYIHRDLRAANILVSAS-----------------LVC-------KIADFGLARVIEDN 337
Query: 246 NHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
            +++    +    + APE I    ++   D+WS G +L+E+ T G   +    N E +  
Sbjct: 338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 397
Query: 302 MERAL-GPLPEH 312
           +ER    P PE+
Sbjct: 398 LERGYRMPRPEN 409

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 88
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 89  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 148 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 183
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 184 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 243
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+            +   G+R                               
Sbjct: 244 ISRVEFTFPD------------FVTEGAR------------------------------- 260
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 261 -------DLISRLLKHNPSQRPMLREVLEHPWI 286

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 142/359 (39%), Gaps = 88/359 (24%)
Query: 46  PRRDDDREGHYVFNLGENLT-----PRYKI--LSKMGEGTFGRVLECWDRQTQERVAIKV 98
           P+R+  R  H  F     L      PR  +    K+GEG+ G V     R + + VA+K 
Sbjct: 124 PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 183
Query: 99  VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
           +   ++ R   +    V+    +++     + V++ N +   + + +V E L G +L D 
Sbjct: 184 MDLRKQQRRELLFNEVVIMRDYQHE-----NVVEMYNSYLVGDELWVVMEFLEGGALTDI 238
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKR 215
           +   +      + +      +L++++ +H   +IH D+K ++ILL     +KL   G+  
Sbjct: 239 VTHTRMN---EEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 295
Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWS 275
             S E+P R                         +V T ++ APE+I  L +    D+WS
Sbjct: 296 QVSKEVPRR-----------------------KXLVGTPYWMAPELISRLPYGPEVDIWS 332
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
           +G +++E+  GE  +     L+ + M+   L P                           
Sbjct: 333 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------------------------- 365
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                          RLKN   LH  +   +L   L  LL  DP++R TA + L HPF 
Sbjct: 366 ---------------RLKN---LH--KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 404

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 100/236 (42%), Gaps = 42/236 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           RY+++  +G G FG      D+Q  E VA+K +    K      I+ +V + +  +    
Sbjct: 20  RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEK------IDENVKREIINHRSLR 73
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP---FPVDLVREFGRQLLESV 182
             + V+ +       H+ IV E   G  LF+     + C    F  D  R F +QL+  V
Sbjct: 74  HPNIVRFKEVILTPTHLAIVMEYASGGELFE-----RICNAGRFSEDEARFFFQQLISGV 128
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
           +Y H +++ H DLK EN LL  S   +L                      K+ DFG   +
Sbjct: 129 SYAHAMQVAHRDLKLENTLLDGSPAPRL----------------------KIADFGYSKA 166
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
           +   +Q  S+ V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 167 SVLHSQPKSA-VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 67
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 68  SHLRHPNILRLYGYFHDATRVYLILE-YAPRGEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 127 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 162
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 223 ISRVEFTFPDFVT--------------------EGA------------------------ 238
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 239 ------RDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 27  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 79
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 80  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 138
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 139 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 174
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 175 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 234
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 235 ISRVEFTFPDFVT--------------------EGA------------------------ 250
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 251 ------RDLISRLLKHNPSQRPMLREVLEHPWI 277

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/231 (24%), Positives = 109/231 (47%), Gaps = 43/231 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-DAAMIEIDVLQHLAKNDKGG 126
           ++I+ ++G+G FG+V +  +++T    A KV+ +  +   +  ++EI++L   A  D   
Sbjct: 21  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEIL---ATCD--- 74
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFD--FLKRNKYCPFPVDLVREFGRQLLESVAY 184
             + V++   + +   + I+ E       D   L+ ++    P   ++   RQ+LE++ +
Sbjct: 75  HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ--IQVVCRQMLEALNF 132
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD- 243
           +H  R+IH DLK  N+L+       L G                   I+L DFG +A + 
Sbjct: 133 LHSKRIIHRDLKAGNVLMT------LEG------------------DIRLADFGVSAKNL 168
Query: 244 --NQNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
              Q   S + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 169 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 116/252 (46%), Gaps = 41/252 (16%)
Query: 69  KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           K+  K+G G FG V +  +++ T  +VA+K ++      +A + E +V++ L ++DK   
Sbjct: 18  KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVK 74
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
            H V  +        I I+ E +   SL DFLK ++    P+  + +F  Q+ E +A++ 
Sbjct: 75  LHAVVTKE------PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 128
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQ 245
               IH DL+  NIL+ +S                   C       K+ DFG +   ++ 
Sbjct: 129 QRNYIHRDLRAANILVSAS-----------------LVC-------KIADFGLARVIEDN 164
Query: 246 NHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
            +++    +    + APE I    ++   D+WS G +L+E+ T G   +    N E +  
Sbjct: 165 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRA 224
Query: 302 MERAL-GPLPEH 312
           +ER    P PE+
Sbjct: 225 LERGYRMPRPEN 236

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 67
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 68  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 127 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 162
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 APSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 223 ISRVEFTFPDFVT--------------------EGA------------------------ 238
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 239 ------RDLISRLLKHNPSQRPXLREVLEHPWI 265

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 41  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 94
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 95  FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 152
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 153 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 188
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 189 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 142/359 (39%), Gaps = 88/359 (24%)
Query: 46  PRRDDDREGHYVFNLGENLT-----PRYKI--LSKMGEGTFGRVLECWDRQTQERVAIKV 98
           P+R+  R  H  F     L      PR  +    K+GEG+ G V     R + + VA+K 
Sbjct: 47  PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 106
Query: 99  VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
           +   ++ R   +    V+    +++     + V++ N +   + + +V E L G +L D 
Sbjct: 107 MDLRKQQRRELLFNEVVIMRDYQHE-----NVVEMYNSYLVGDELWVVMEFLEGGALTDI 161
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKR 215
           +   +      + +      +L++++ +H   +IH D+K ++ILL     +KL   G+  
Sbjct: 162 VTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 218
Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWS 275
             S E+P R                         +V T ++ APE+I  L +    D+WS
Sbjct: 219 QVSKEVPRR-----------------------KXLVGTPYWMAPELISRLPYGPEVDIWS 255
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
           +G +++E+  GE  +     L+ + M+   L P                           
Sbjct: 256 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------------------------- 288
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                          RLKN   LH  +   +L   L  LL  DP++R TA + L HPF 
Sbjct: 289 ---------------RLKN---LH--KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 327

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 105/251 (41%), Gaps = 28/251 (11%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + I   +G+G FG V    +RQ++  +A+KV+   +   + A +E  + + +        
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
            + +++  +F     + ++ E   P    + +  K   F       +  +L  +++Y H 
Sbjct: 72  PNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
            R+IH D+KPEN+LL              S+GE+           K+ DFG S    +  
Sbjct: 131 KRVIHRDIKPENLLL-------------GSNGEL-----------KIADFGWSVHAPSSR 166
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL 306
            +++  T  Y  PE+I G       D+WS+G +  E   G   F+ H   E    + R  
Sbjct: 167 RTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVE 226
Query: 307 GPLPEHMIRRA 317
              P+ +   A
Sbjct: 227 FTFPDFVTEGA 237

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFXEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 110/231 (47%), Gaps = 43/231 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR-DAAMIEIDVLQHLAKNDKGG 126
           ++I+ ++G+G FG+V +  +++T    A KV+ +  +   +  ++EI++L   A  D   
Sbjct: 13  WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEIL---ATCD--- 66
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFD--FLKRNKYCPFPVDLVREFGRQLLESVAY 184
             + V++   + +   + I+ E       D   L+ ++    P   ++   RQ+LE++ +
Sbjct: 67  HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ--IQVVCRQMLEALNF 124
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD- 243
           +H  R+IH DLK  N+L+             +  G+           I+L DFG +A + 
Sbjct: 125 LHSKRIIHRDLKAGNVLM-------------TLEGD-----------IRLADFGVSAKNL 160
Query: 244 --NQNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
              Q   S + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 161 KTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 211

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 158 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 67
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 68  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 127 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 162
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 223 ISRVEFTFPDFVT--------------------EGA------------------------ 238
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 239 ------RDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 37/232 (15%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQ 117
           +GE     ++ +S++G G  G V +   R +   +A K++    K   R+  + E+ VL 
Sbjct: 10  VGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLH 69
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
                    S + V     F     I I  E + G SL   LK  K    P +++ +   
Sbjct: 70  EC------NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR--IPEEILGKVSI 121
Query: 177 QLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            +L  +AY+ +  +++H D+KP NIL+             +S GE           IKL 
Sbjct: 122 AVLRGLAYLREKHQIMHRDVKPSNILV-------------NSRGE-----------IKLC 157
Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           DFG S    +   +S V TR Y APE + G  +S   D+WS+G  LVEL  G
Sbjct: 158 DFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 14  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 66
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 67  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 126 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 161
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 162 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 221
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 222 ISRVEFTFPDFVT--------------------EGA------------------------ 237
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 238 ------RDLISRLLKHNPSQRPMLREVLEHPWI 264

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 161 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 9   FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 61
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 62  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 121 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 156
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 157 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 216
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 217 ISRVEFTFPDFVT--------------------EGA------------------------ 232
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 233 ------RDLISRLLKHNPSQRPMLREVLEHPWI 259

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 33  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 86
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 87  FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 144
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 145 HSLDLIYRDLKPENLL------IDEQGY------------------IQVTDFGFAKRVKG 180
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 181 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 81/359 (22%), Positives = 142/359 (39%), Gaps = 88/359 (24%)
Query: 46  PRRDDDREGHYVFNLGENLT-----PRYKI--LSKMGEGTFGRVLECWDRQTQERVAIKV 98
           P+R+  R  H  F     L      PR  +    K+GEG+ G V     R + + VA+K 
Sbjct: 2   PQREPQRVSHEQFRAALQLVVDPGDPRSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKK 61
Query: 99  VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
           +   ++ R   +    V+    +++     + V++ N +   + + +V E L G +L D 
Sbjct: 62  MDLRKQQRRELLFNEVVIMRDYQHE-----NVVEMYNSYLVGDELWVVMEFLEGGALTDI 116
Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKR 215
           +   +      + +      +L++++ +H   +IH D+K ++ILL     +KL   G+  
Sbjct: 117 VTHTRMNE---EQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA 173
Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWS 275
             S E+P R                         +V T ++ APE+I  L +    D+WS
Sbjct: 174 QVSKEVPRR-----------------------KXLVGTPYWMAPELISRLPYGPEVDIWS 210
Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
           +G +++E+  GE  +     L+ + M+   L P                           
Sbjct: 211 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP--------------------------- 243
Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                          RLKN   LH  +   +L   L  LL  DP++R TA + L HPF 
Sbjct: 244 ---------------RLKN---LH--KVSPSLKGFLDRLLVRDPAQRATAAELLKHPFL 282

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 161 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 98/225 (43%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E   G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN++      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IQVTDFGFAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 109/253 (43%), Gaps = 46/253 (18%)
Query: 59  NLGENLTPRYK-----ILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAA-- 109
           NLG +  P  K      L  +G+G+FG+VL    +  +   A+KV+  ++I K ++    
Sbjct: 26  NLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHI 85
Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPV 168
           M E +VL    KN K      V +   F   + +  V + + G  LF  L+R + C F  
Sbjct: 86  MSERNVL---LKNVK--HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRER-C-FLE 138
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
              R +  ++  ++ Y+H L +++ DLKPENILL S                        
Sbjct: 139 PRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS------------------------ 174
Query: 229 SSAIKLIDFGSTAFDNQNHSSIVS----TRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
              I L DFG    +N  H+S  S    T  Y APEV+    +    D W +G +L E+ 
Sbjct: 175 QGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEML 233
Query: 285 TGEALFQTHENLE 297
            G   F +    E
Sbjct: 234 YGLPPFYSRNTAE 246

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/230 (26%), Positives = 100/230 (43%), Gaps = 36/230 (15%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLAKNDKG 125
           Y++  ++G+G F  V  C      +  A K++ + +   RD   +E +  +  L K+   
Sbjct: 24  YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKH--- 80
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQLLESVA 183
              + V++ +      H  ++F+ + G  LF D + R  Y         +   Q+LE+V 
Sbjct: 81  --PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---QILEAVL 135
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---ST 240
           + H + ++H DLKPEN+LL S    KL G                 +A+KL DFG     
Sbjct: 136 HCHQMGVVHRDLKPENLLLAS----KLKG-----------------AAVKLADFGLAIEV 174
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
             + Q       T  Y +PEV+    +  P D+W+ G IL  L  G   F
Sbjct: 175 EGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+IL  G++   D W++G ++ ++  G
Sbjct: 194 RTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 34/264 (12%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQ-ERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           Y + + +G G++G V     + T+  R A K+ +   +  D    EI++++ L       
Sbjct: 11  YTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL------D 64
Query: 127 SSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
             + +++   F+    I +V E   G  LF+ +   +   F         + +L +VAY 
Sbjct: 65  HPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYC 122
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FD 243
           H L + H DLKPEN L ++                         S +KLIDFG  A    
Sbjct: 123 HKLNVAHRDLKPENFLFLTDS---------------------PDSPLKLIDFGLAARFKP 161
Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
            +   + V T +Y +P+V+ GL +   CD WS G ++  L  G   F    + E +  + 
Sbjct: 162 GKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR 220
Query: 304 RALGPLPEHMIRRASRGTEKYFRR 327
                 PE      S   E   RR
Sbjct: 221 EGTFTFPEKDWLNVSPQAESLIRR 244

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 63.2 bits (152), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 158 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                    ++   F   +++ +V E   G  +F  L+R     F     R +  Q++ +
Sbjct: 100 ---NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN++      I   GY                  IK+ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 63
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 64  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 123 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSCH 158
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 159 APSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 219 ISRVEFTFPDFVT--------------------EGA------------------------ 234
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 235 ------RDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 161 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 34/269 (12%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQ-ERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           ++   Y + + +G G++G V     + T+  R A K+ +   +  D    EI++++ L  
Sbjct: 23  DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSL-- 80
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                  + +++   F+    I +V E   G  LF+ +   +   F         + +L 
Sbjct: 81  ----DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLS 134
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           +VAY H L + H DLKPEN L ++                         S +KLIDFG  
Sbjct: 135 AVAYCHKLNVAHRDLKPENFLFLTDS---------------------PDSPLKLIDFGLA 173
Query: 241 A--FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
           A     +   + V T +Y +P+V+ GL +   CD WS G ++  L  G   F    + E 
Sbjct: 174 ARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEV 232
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRR 327
           +  +       PE      S   E   RR
Sbjct: 233 MLKIREGTFTFPEKDWLNVSPQAESLIRR 261

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                    ++   F   +++ +V E   G  +F  L+R     F     R +  Q++ +
Sbjct: 100 ---NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN++      I   GY                  IK+ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 100/225 (44%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDA--AMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++  + + K ++    + E  +LQ +   
Sbjct: 42  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV--- 98
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E   G  +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFSEPHARFYAAQIVLT 153
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN++      I   GY                  I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IQVTDFGLAK 189
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 190 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 104/251 (41%), Gaps = 28/251 (11%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + I   +G+G FG V    +RQ++  +A+KV+   +   + A +E  + + +        
Sbjct: 14  FDIGRPLGKGKFGNVYLARERQSKFILALKVL--FKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
            + +++  +F     + ++ E   P    + +  K   F       +  +L  +++Y H 
Sbjct: 72  PNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHS 130
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
            R+IH D+KPEN+LL              S+GE+           K+ DFG S    +  
Sbjct: 131 KRVIHRDIKPENLLL-------------GSNGEL-----------KIADFGWSVHAPSSR 166
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL 306
             ++  T  Y  PE+I G       D+WS+G +  E   G   F+ H   E    + R  
Sbjct: 167 RDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVE 226
Query: 307 GPLPEHMIRRA 317
              P+ +   A
Sbjct: 227 FTFPDFVTEGA 237

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   + +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 158 APSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 67
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 68  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 126
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 127 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 162
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   + +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 223 ISRVEFTFPDFVT--------------------EGA------------------------ 238
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 239 ------RDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 63
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 64  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 123 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 158
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +    ++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 159 APSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 219 ISRVEFTFPDFVT--------------------EGA------------------------ 234
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 235 ------RDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 11  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 63
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 64  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 122
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 123 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 158
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   + +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 159 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 218
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 219 ISRVEFTFPDFVT--------------------EGA------------------------ 234
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 235 ------RDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 99/237 (41%), Gaps = 44/237 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           RY+++  +G G FG      D+Q+ E VA+K +    K      I+ +V + +  +    
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK------IDENVKREIINHRSLR 73
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP---FPVDLVREFGRQLLESV 182
             + V+ +       H+ IV E   G  LF+     + C    F  D  R F +QL+  V
Sbjct: 74  HPNIVRFKEVILTPTHLAIVMEYASGGELFE-----RICNAGRFSEDEARFFFQQLISGV 128
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLP----GYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           +Y H +++ H DLK EN LL  S   +L     GY +SS         PKS+        
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSV----LHSQPKST-------- 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
                       V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 ------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
           ++I+  +G G FG V     + T+   A+K++      + A       E DVL +     
Sbjct: 76  FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN----- 130
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            G       +   F   NH+ +V +  +G  L   L + +    P D+ R +  +++ ++
Sbjct: 131 -GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFE-DKLPEDMARFYIGEMVLAI 188
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H L  +H D+KP+N+LL  +  I+L  +                S +K+ D G+   
Sbjct: 189 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADF---------------GSCLKMNDDGTV-- 231
Query: 243 DNQNHSSIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILVELCTGEALFQTHENLE 297
                S  V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +E
Sbjct: 232 ---QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
           ++I+  +G G FG V     + T+   A+K++      + A       E DVL +     
Sbjct: 92  FEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVN----- 146
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            G       +   F   NH+ +V +  +G  L   L + +    P D+ R +  +++ ++
Sbjct: 147 -GDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFE-DKLPEDMARFYIGEMVLAI 204
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H L  +H D+KP+N+LL  +  I+L  +                S +K+ D G+   
Sbjct: 205 DSIHQLHYVHRDIKPDNVLLDVNGHIRLADF---------------GSCLKMNDDGTV-- 247
Query: 243 DNQNHSSIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILVELCTGEALFQTHENLE 297
                S  V T  Y +PE++     G+G   P CD WS+G  + E+  GE  F     +E
Sbjct: 248 ---QSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVE 304

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/225 (24%), Positives = 97/225 (43%), Gaps = 37/225 (16%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
           +++ +  +G G+FGRV+     +T    A+K++   +    K  +  + E  +LQ +   
Sbjct: 43  QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 99
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                    ++   F   +++ +V E   G  +F  L+R     F     R +  Q++ +
Sbjct: 100 ---NFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRR--IGRFXEPHARFYAAQIVLT 154
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN++      I   GY                  IK+ DFG   
Sbjct: 155 FEYLHSLDLIYRDLKPENLM------IDQQGY------------------IKVTDFGFAK 190
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                   +  T  Y APE+IL  G++   D W++G ++ E+  G
Sbjct: 191 RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 98/233 (42%), Gaps = 36/233 (15%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           RY  +  +G G FG      D+ T+E VA+K +         A I+ +V + +  +    
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIER------GAAIDENVQREIINHRSLR 74
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
             + V+ +       H+ I+ E   G  L++ +       F  D  R F +QLL  V+Y 
Sbjct: 75  HPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGR--FSEDEARFFFQQLLSGVSYC 132
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAF 242
           H +++ H DLK EN LL  S   +L                      K+ DFG   S+  
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPRL----------------------KICDFGYSKSSVL 170
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHE 294
            +Q  S+ V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 171 HSQPKST-VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPE 222

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   + +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 158 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+            +   G+R                               
Sbjct: 218 ISRVEFTFPD------------FVTEGAR------------------------------- 234
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 235 -------DLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + +L  +G G++ +VL    ++T    A+KVV+      D  +  +   +H+ +     S
Sbjct: 22  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ---AS 78
Query: 128 SH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
           +H   V + + F   + +  V E + G  L   ++R +    P +  R +  ++  ++ Y
Sbjct: 79  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNY 136
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H+  +I+ DLK +N+LL S   IKL  Y     G  P               G T    
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---------------GDTT--- 178
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
              S    T +Y APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 179 ---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 221

>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 114/249 (45%), Gaps = 45/249 (18%)
Query: 69  KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           K+  K+G G FG V +  +++ T  +VA+K ++      +A + E +V++ L ++DK   
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTL-QHDKLVK 241
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
            H V  +        I I+ E +   SL DFLK ++    P+  + +F  Q+ E +A++ 
Sbjct: 242 LHAVVTKE------PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 295
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG-EMPFRCLPKSSAIKLIDFGSTAFDNQ 245
               IH DL+  NIL+ +S   K+  +  +  G + P     K +A + I+FGS      
Sbjct: 296 QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPI----KWTAPEAINFGS------ 345
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMER 304
                                ++   D+WS G +L+E+ T G   +    N E +  +ER
Sbjct: 346 ---------------------FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER 384
Query: 305 AL-GPLPEH 312
               P PE+
Sbjct: 385 GYRMPRPEN 393

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 97/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN++      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLI------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y APE+I+  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + +L  +G G++ +VL    ++T    A+KVV+      D  +  +   +H+ +     S
Sbjct: 7   FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ---AS 63
Query: 128 SH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
           +H   V + + F   + +  V E + G  L   ++R +    P +  R +  ++  ++ Y
Sbjct: 64  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNY 121
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H+  +I+ DLK +N+LL S   IKL  Y     G  P               G T    
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---------------GDTT--- 163
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
              S    T +Y APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 164 ---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 206

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/226 (23%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + +L  +G G++ +VL    ++T    A+KVV+      D  +  +   +H+ +     S
Sbjct: 11  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ---AS 67
Query: 128 SH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
           +H   V + + F   + +  V E + G  L   ++R +    P +  R +  ++  ++ Y
Sbjct: 68  NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNY 125
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H+  +I+ DLK +N+LL S   IKL  Y     G  P               G T    
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---------------GDTT--- 167
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
              S    T +Y APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 168 ---SXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 210

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 129/343 (37%), Gaps = 79/343 (23%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           +N   +Y++L   G+G FG V  C  R T +  A K +   R  +     E   L     
Sbjct: 183 KNTFRQYRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG--EAMALNEKQI 237
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDF-LKRNKYCPFPVDLVREFGRQLLE 180
            +K  S   V +   ++ ++ +C+V   +      F +       FP      +  ++  
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            +  +H  R+++ DLKPENILL     I++     +         +P+   IK       
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVH-------VPEGQTIK------- 343
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                     V T  Y APEV+    +++  D W++GC+L E+  G++ FQ  +      
Sbjct: 344 --------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            +ER +  +PE    R S                                          
Sbjct: 396 EVERLVKEVPEEYSERFS------------------------------------------ 413
Query: 361 DRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
            +ARS    L   LL  DP+ERL     +AR+   HP F+ LN
Sbjct: 414 PQARS----LCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   + +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 158 APSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 103/243 (42%), Gaps = 42/243 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +Y    K+G+G  G V    D  T + VAI+ +   ++ +   +I   ++    KN    
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNP--- 77
Query: 127 SSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                 I N+ D     + + +V E L G SL D +     C      +    R+ L+++
Sbjct: 78  -----NIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 129
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++H  ++IH D+K +NILL                            ++KL DFG  A 
Sbjct: 130 EFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCAQ 165
Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
              +    S++V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L
Sbjct: 166 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 300 AMM 302
            ++
Sbjct: 226 YLI 228

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   + +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 158 APSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 36  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 88
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 89  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 147
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 148 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 183
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +     +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 184 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 243
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 244 ISRVEFTFPDFVT--------------------EGA------------------------ 259
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 260 ------RDLISRLLKHNPSQRPMLREVLEHPWI 286

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 102/226 (45%), Gaps = 29/226 (12%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + +L  +G G++ +VL    ++T    A++VV+      D  +  +   +H+ +     S
Sbjct: 54  FDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ---AS 110
Query: 128 SH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
           +H   V + + F   + +  V E + G  L   ++R +    P +  R +  ++  ++ Y
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNY 168
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H+  +I+ DLK +N+LL S   IKL  Y     G  P               G T    
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP---------------GDTT--- 210
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
              S+   T +Y APE++ G  + +  D W++G ++ E+  G + F
Sbjct: 211 ---STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF 253

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 79/343 (23%), Positives = 129/343 (37%), Gaps = 79/343 (23%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           +N   +Y++L   G+G FG V  C  R T +  A K +   R  +     E   L     
Sbjct: 183 KNTFRQYRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKG--EAMALNEKQI 237
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDF-LKRNKYCPFPVDLVREFGRQLLE 180
            +K  S   V +   ++ ++ +C+V   +      F +       FP      +  ++  
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            +  +H  R+++ DLKPENILL     I++     +         +P+   IK       
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVH-------VPEGQTIK------- 343
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                     V T  Y APEV+    +++  D W++GC+L E+  G++ FQ  +      
Sbjct: 344 --------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE 395
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            +ER +  +PE    R S                                          
Sbjct: 396 EVERLVKEVPEEYSERFS------------------------------------------ 413
Query: 361 DRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
            +ARS    L   LL  DP+ERL     +AR+   HP F+ LN
Sbjct: 414 PQARS----LCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 15  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 67
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 68  SHLRHPNILRLYGYFHDATRVYLILE-YAPRGEVYKELQKLSKFDEQRTATYITELANAL 126
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 127 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 162
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +     +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 163 APSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 222
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 223 ISRVEFTFPDFVT--------------------EGA------------------------ 238
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 239 ------RDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 64
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 65  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 124 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 159
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +     +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 160 APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 219
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 220 ISRVEFTFPDFVT--------------------EGA------------------------ 235
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 236 ------RDLISRLLKHNPSQRPMLREVLEHPWI 262

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 102/250 (40%), Gaps = 42/250 (16%)
Query: 70  ILSKM-GEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKNDK 124
           IL KM G+G+FG+V     ++T +  AIK ++      D      M+E  VL    ++  
Sbjct: 20  ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVA 183
                C      F  + ++  V E L     D +   + C  F +     +  +++  + 
Sbjct: 80  LTHMFCT-----FQTKENLFFVMEYLNGG--DLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---ST 240
           ++H   +++ DLK +NILL                         K   IK+ DFG     
Sbjct: 133 FLHSKGIVYRDLKLDNILL------------------------DKDGHIKIADFGMCKEN 168
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLEH 298
              +   +    T  Y APE++LG  +++  D WS G +L E+  G++ F  Q  E L H
Sbjct: 169 MLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFH 228
Query: 299 LAMMERALGP 308
              M+    P
Sbjct: 229 SIRMDNPFYP 238

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T  Y AP +IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 144/346 (41%), Gaps = 77/346 (22%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           +NL    KIL   G G+ G V+     Q +  VA+K  R +  + D A++EI +L     
Sbjct: 32  KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG-----R 176
           +      +C +  + F Y     I  E    +L D ++        + L +E+      R
Sbjct: 86  HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 177 QLLESVAYMHDLRLIHTDLKPENILL-VSSEFIKLPGYKRSSSGEMPFRCLPKSSAI-KL 234
           Q+   VA++H L++IH DLKP+NIL+  SS F          +G    R L     + K 
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT-----ADQQTGAENLRILISDFGLCKK 195
Query: 235 IDFGSTAF-DNQNHSSIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILVELCTGEALF 290
           +D G   F  N N+ S   T  +RAPE++        +   D++S+GC+   +       
Sbjct: 196 LDSGQXXFRXNLNNPS--GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI------- 246
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES--IKAVKK 348
                   L+  +   G              +KY              SRES  I+ +  
Sbjct: 247 --------LSKGKHPFG--------------DKY--------------SRESNIIRGIFS 270
Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           LD +K    LH     +  TDL+  ++ +DP +R TA + L HP F
Sbjct: 271 LDEMK---CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 144/346 (41%), Gaps = 77/346 (22%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           +NL    KIL   G G+ G V+     Q +  VA+K  R +  + D A++EI +L     
Sbjct: 32  KNLVVSEKIL---GYGSSGTVVFQGSFQGRP-VAVK--RMLIDFCDIALMEIKLLTESDD 85
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG-----R 176
           +      +C +  + F Y     I  E    +L D ++        + L +E+      R
Sbjct: 86  HPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLR 140
Query: 177 QLLESVAYMHDLRLIHTDLKPENILL-VSSEFIKLPGYKRSSSGEMPFRCLPKSSAI-KL 234
           Q+   VA++H L++IH DLKP+NIL+  SS F          +G    R L     + K 
Sbjct: 141 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT-----ADQQTGAENLRILISDFGLCKK 195
Query: 235 IDFGSTAF-DNQNHSSIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILVELCTGEALF 290
           +D G   F  N N+ S   T  +RAPE++        +   D++S+GC+   +       
Sbjct: 196 LDSGQXXFRXNLNNPS--GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYI------- 246
Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES--IKAVKK 348
                   L+  +   G              +KY              SRES  I+ +  
Sbjct: 247 --------LSKGKHPFG--------------DKY--------------SRESNIIRGIFS 270
Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           LD +K    LH     +  TDL+  ++ +DP +R TA + L HP F
Sbjct: 271 LDEMK---CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 313

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 62.0 bits (149), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 156 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 102/230 (44%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R    A     ++ + +  N     
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKR----AVDCPENIKKEICINKMLNH 63
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
            + V+   ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 64  ENVVK---FYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 145/349 (41%), Gaps = 79/349 (22%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRDAAMIEIDVLQHLA 120
           +NL    KIL   G G+ G V+  +    Q R VA+K  R +  + D A++EI +L    
Sbjct: 14  KNLVVSEKIL---GYGSSGTVV--FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESD 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG----- 175
            +      +C +  + F Y     I  E    +L D ++        + L +E+      
Sbjct: 67  DHPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILL-VSSEFIKLPGYKRSSSGEMPFRCLPKSSAI-K 233
           RQ+   VA++H L++IH DLKP+NIL+  SS F          +G    R L     + K
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT-----ADQQTGAENLRILISDFGLCK 176
Query: 234 LIDFGSTAF-DNQNHSSIVSTRHYRAPEVILGLG-------WSYPCDMWSVGCILVELCT 285
            +D G ++F  N N+ S   T  +RAPE++            +   D++S+GC+   +  
Sbjct: 177 KLDSGQSSFRTNLNNPS--GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL- 233
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
                                           S+G   +  + SR    E  +    I+ 
Sbjct: 234 --------------------------------SKGKHPFGDKYSR----ESNI----IRG 253
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           +  LD +K    LH     +  TDL+  ++ +DP +R TA + L HP F
Sbjct: 254 IFSLDEMK---CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 71/333 (21%), Positives = 126/333 (37%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +     +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 161 APSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 12  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 64
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 65  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 123
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ +FG S  
Sbjct: 124 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIANFGWSVH 159
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 160 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 219
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 220 ISRVEFTFPDFVT--------------------EGA------------------------ 235
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 236 ------RDLISRLLKHNPSQRPMLREVLEHPWI 262

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +Y    K+G+G  G V    D  T + VAI+ +   ++ +   +I   ++    KN    
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-- 78
Query: 127 SSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                 I N+ D     + + +V E L G SL D +     C      +    R+ L+++
Sbjct: 79  ------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 129
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++H  ++IH D+K +NILL                            ++KL DFG  A 
Sbjct: 130 EFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCAQ 165
Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
              +    S +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L
Sbjct: 166 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 300 AMM 302
            ++
Sbjct: 226 YLI 228

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 70/333 (21%), Positives = 128/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ +FG S  
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIANFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 161 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 127/332 (38%), Gaps = 88/332 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q +  +A+KV+         A +E   ++H  + +    
Sbjct: 7   FEIGRPLGKGKFGNVYLAREKQRKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 59
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 60  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 119 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 154
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 155 APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 214
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 215 ISRVEFTFPDFVT--------------------EGA------------------------ 230
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                  DL+  LL+++PS+R   R+ L HP+
Sbjct: 231 ------RDLISRLLKHNPSQRPMLREVLEHPW 256

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 126/332 (37%), Gaps = 88/332 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 63  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 122 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +     +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 158 APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                  DL+  LL+++PS+R   R+ L HP+
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPW 259

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +Y    K+G+G  G V    D  T + VAI+ +   ++ +   +I   ++    KN    
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-- 78
Query: 127 SSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                 I N+ D     + + +V E L G SL D +     C      +    R+ L+++
Sbjct: 79  ------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 129
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++H  ++IH D+K +NILL                            ++KL DFG  A 
Sbjct: 130 EFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCAQ 165
Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
              +    S +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L
Sbjct: 166 ITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 300 AMM 302
            ++
Sbjct: 226 YLI 228

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 71/332 (21%), Positives = 126/332 (37%), Gaps = 88/332 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++Q++  +A+KV+         A +E   ++H  + +    
Sbjct: 13  FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 65
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 66  SHLRHPNILRLYGYFHDATRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  R+IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 125 SYCHSKRVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 160
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +     +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E    
Sbjct: 161 APSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR 220
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 221 ISRVEFTFPDFVT--------------------EGA------------------------ 236
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                  DL+  LL+++PS+R   R+ L HP+
Sbjct: 237 ------RDLISRLLKHNPSQRPMLREVLEHPW 262

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 38/236 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + I+  +G+G FG V    ++Q +  +A+KV+         + +E + ++H  + +    
Sbjct: 16  FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFK-------SQLEKEGVEHQLRREIEIQ 68
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++ N+F  R  I ++ E   P    + +  K+  F       F  +L +++
Sbjct: 69  SHLRHPNILRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHGRFDEQRSATFMEELADAL 127
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
            Y H+ ++IH D+KPEN+L+         GYK    GE+           K+ DFG S  
Sbjct: 128 HYCHERKVIHRDIKPENLLM---------GYK----GEL-----------KIADFGWSVH 163
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
             +     +  T  Y  PE+I G       D+W  G +  E   G   F +  + E
Sbjct: 164 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 219

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 102/243 (41%), Gaps = 42/243 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +Y    K+G+G  G V    D  T + VAI+ +   ++ +   +I   ++    KN    
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-- 79
Query: 127 SSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                 I N+ D     + + +V E L G SL D +     C      +    R+ L+++
Sbjct: 80  ------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 130
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++H  ++IH D+K +NILL                            ++KL DFG  A 
Sbjct: 131 EFLHSNQVIHRDIKSDNILL------------------------GMDGSVKLTDFGFCAQ 166
Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
              +    S +V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L
Sbjct: 167 ITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 300 AMM 302
            ++
Sbjct: 227 YLI 229

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 7   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 63
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 64  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 117
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 118 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 153
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 154 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 56/232 (24%), Positives = 98/232 (42%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 90  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-CLLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +S V T  Y +PE++     S   D+W++GCI+ +L  G
Sbjct: 179 AKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 61.6 bits (148), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 41/251 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
           +++   +G+G+FG+V     ++T +  AIK ++      D      M+E  VL    ++ 
Sbjct: 20  FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHP 79
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGRQLLESV 182
                 C      F  + ++  V E L     D +   + C  F +     +  +++  +
Sbjct: 80  FLTHMFCT-----FQTKENLFFVMEYLNGG--DLMYHIQSCHKFDLSRATFYAAEIILGL 132
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---S 239
            ++H   +++ DLK +NILL                         K   IK+ DFG    
Sbjct: 133 QFLHSKGIVYRDLKLDNILL------------------------DKDGHIKIADFGMCKE 168
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENLE 297
               +   +    T  Y APE++LG  +++  D WS G +L E+  G++ F  Q  E L 
Sbjct: 169 NMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
Query: 298 HLAMMERALGP 308
           H   M+    P
Sbjct: 229 HSIRMDNPFYP 239

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 61.6 bits (148), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 131/325 (40%), Gaps = 81/325 (24%)
Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           K+GEG+ G V     R + + VA+K +   ++ R   +    V+    +++     + V+
Sbjct: 27  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-----NVVE 81
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           + N +   + + +V E L G +L D +   +      + +      +L++++ +H   +I
Sbjct: 82  MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVI 138
Query: 192 HTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSS 249
           H D+K ++ILL     +KL   G+    S E+P R                         
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-----------------------KX 175
Query: 250 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPL 309
           +V T ++ APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P 
Sbjct: 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 234
Query: 310 PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD 369
                                                    RLKN   LH  +   +L  
Sbjct: 235 -----------------------------------------RLKN---LH--KVSPSLKG 248
Query: 370 LLHGLLRYDPSERLTARQALNHPFF 394
            L  LL  DP++R TA + L HPF 
Sbjct: 249 FLDRLLVRDPAQRATAAELLKHPFL 273

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 98/237 (41%), Gaps = 44/237 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           RY+++  +G G FG      D+Q+ E VA+K +    K      I+ +V + +  +    
Sbjct: 20  RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEK------IDENVKREIINHRSLR 73
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP---FPVDLVREFGRQLLESV 182
             + V+ +       H+ IV E   G  LF+     + C    F  D  R F +QL+  V
Sbjct: 74  HPNIVRFKEVILTPTHLAIVMEYASGGELFE-----RICNAGRFSEDEARFFFQQLISGV 128
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLP----GYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           +Y H +++ H DLK EN LL  S   +L     GY +SS         PK +        
Sbjct: 129 SYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSV----LHSQPKDT-------- 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHE 294
                       V T  Y APEV+L   +     D+WS G  L  +  G   F+  E
Sbjct: 177 ------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPE 221

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 73/325 (22%), Positives = 131/325 (40%), Gaps = 81/325 (24%)
Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           K+GEG+ G V     R + + VA+K +   ++ R   +    V+    +++     + V+
Sbjct: 31  KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHE-----NVVE 85
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           + N +   + + +V E L G +L D +   +      + +      +L++++ +H   +I
Sbjct: 86  MYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNE---EQIAAVCLAVLQALSVLHAQGVI 142
Query: 192 HTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSS 249
           H D+K ++ILL     +KL   G+    S E+P R                         
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRR-----------------------KX 179
Query: 250 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPL 309
           +V T ++ APE+I  L +    D+WS+G +++E+  GE  +     L+ + M+   L P 
Sbjct: 180 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP- 238
Query: 310 PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD 369
                                                    RLKN   LH  +   +L  
Sbjct: 239 -----------------------------------------RLKN---LH--KVSPSLKG 252
Query: 370 LLHGLLRYDPSERLTARQALNHPFF 394
            L  LL  DP++R TA + L HPF 
Sbjct: 253 FLDRLLVRDPAQRATAAELLKHPFL 277

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           ++ +G+G FG+V++  +       AIK +R   +     + E+ +L  L        +H 
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL--------NHQ 62
Query: 131 VQIR---NWFDYRNHI---------CIVFEKL----GPSLFDFLKRNKYCPFPVDLVREF 174
             +R    W + RN +           +F ++      +L+D +          +  R F
Sbjct: 63  YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF 122
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
            RQ+LE+++Y+H   +IH DLKP NI +  S  +K+  +  +       + + +S  I  
Sbjct: 123 -RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA-------KNVHRSLDILK 174
Query: 235 IDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELC 284
           +D  +    + N +S + T  Y A EV+ G G ++   DM+S+G I  E+ 
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 37/221 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGG 126
           +  +G G+FGRV+    +++    A+K++   +    K  +  + E  +LQ +       
Sbjct: 46  IKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------N 99
Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++   F   +++ +V E + G  +F  L+R     F     R +  Q++ +  Y+
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRR--IGRFSEPHARFYAAQIVLTFEYL 157
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H L LI+ DLKPEN+L      I   GY                  I++ DFG       
Sbjct: 158 HSLDLIYRDLKPENLL------IDQQGY------------------IQVTDFGFAKRVKG 193
Query: 246 NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               +  T    APE+IL  G++   D W++G ++ E+  G
Sbjct: 194 RTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 9   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 65
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 66  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 120 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 155
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG +G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 108/253 (42%), Gaps = 38/253 (15%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           L +MG GT G+V +   R+T   +A+K +R      +   I +D+   L  +D     + 
Sbjct: 30  LGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHD---CPYI 86
Query: 131 VQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR- 189
           VQ    F     + I  E +G +  + LK+    P P  ++ +    +++++ Y+ +   
Sbjct: 87  VQCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHG 145
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--FDNQNH 247
           +IH D+KP NILL                         +   IKL DFG +    D++  
Sbjct: 146 VIHRDVKPSNILL------------------------DERGQIKLCDFGISGRLVDDKAK 181
Query: 248 SSIVSTRHYRAPEVILGLGWSYP-----CDMWSVGCILVELCTGEALFQT-HENLEHLAM 301
                   Y APE I     + P      D+WS+G  LVEL TG+  ++    + E L  
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTK 241
Query: 302 MERALGP-LPEHM 313
           + +   P LP HM
Sbjct: 242 VLQEEPPLLPGHM 254

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/231 (24%), Positives = 105/231 (45%), Gaps = 33/231 (14%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           ++ +G+G FG+V++  +       AIK +R   +     + E+ +L  L        +H 
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL--------NHQ 62
Query: 131 VQIR---NWFDYRNHI---------CIVFEKL----GPSLFDFLKRNKYCPFPVDLVREF 174
             +R    W + RN +           +F ++      +L+D +          +  R F
Sbjct: 63  YVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
            RQ+LE+++Y+H   +IH DLKP NI +  S  +K+  +  +       + + +S  I  
Sbjct: 123 -RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLA-------KNVHRSLDILK 174
Query: 235 IDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELC 284
           +D  +    + N +S + T  Y A EV+ G G ++   DM+S+G I  E+ 
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 119/289 (41%), Gaps = 73/289 (25%)
Query: 36  TAAAA---KHVSPPR--RDDDREGHYVFNLGENLTPR-YKILSKMGEGTFGRVLECWDRQ 89
           TAAA    +H+  P    DDD +     N   ++  R Y IL ++G G   +V +  + +
Sbjct: 20  TAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 90  TQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-- 140
            Q   AIK V       +++  YR+    EI  L  L +       H  +I   +DY   
Sbjct: 80  KQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQ-------HSDKIIRLYDYEIT 127
Query: 141 -NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPE 198
             +I +V E     L  +LK+ K   P+     + + + +LE+V  +H   ++H+DLKP 
Sbjct: 128 DQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQHGIVHSDLKPA 184
Query: 199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSI-----VST 253
           N L+V                            +KLIDFG       + +S+     V T
Sbjct: 185 NFLIV-------------------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 254 RHYRAPEVILGLGWS-----------YPCDMWSVGCILVELCTGEALFQ 291
            +Y  PE I  +  S              D+WS+GCIL  +  G+  FQ
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 36/234 (15%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDV-LQHLAK 121
            T  Y++  ++G+G F  V  C      +  A  ++ + +   RD   +E +  +  L K
Sbjct: 9   FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK 68
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLF-DFLKRNKYCPFPVDLVREFGRQLL 179
           +      + V++ +      H  ++F+ + G  LF D + R  Y         +   Q+L
Sbjct: 69  H-----PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQ---QIL 120
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           E+V + H + ++H +LKPEN+LL S    KL G                 +A+KL DFG 
Sbjct: 121 EAVLHCHQMGVVHRNLKPENLLLAS----KLKG-----------------AAVKLADFGL 159
Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
                 + Q       T  Y +PEV+    +  P D+W+ G IL  L  G   F
Sbjct: 160 AIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 103/243 (42%), Gaps = 42/243 (17%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +Y    K+G+G  G V    D  T + VAI+ +   ++ +   +I   ++    KN    
Sbjct: 22  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPN-- 79
Query: 127 SSHCVQIRNWFD---YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                 I N+ D     + + +V E L G SL D +     C      +    R+ L+++
Sbjct: 80  ------IVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQAL 130
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++H  ++IH ++K +NILL                            ++KL DFG  A 
Sbjct: 131 EFLHSNQVIHRNIKSDNILL------------------------GMDGSVKLTDFGFCAQ 166
Query: 243 ---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
              +    S++V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L
Sbjct: 167 ITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 300 AMM 302
            ++
Sbjct: 227 YLI 229

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 89/349 (25%), Positives = 143/349 (40%), Gaps = 79/349 (22%)
Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIRKYRDAAMIEIDVLQHLA 120
           +NL    KIL   G G+ G V+  +    Q R VA+K  R +  + D A++EI +L    
Sbjct: 14  KNLVVSEKIL---GYGSSGTVV--FQGSFQGRPVAVK--RMLIDFCDIALMEIKLLTESD 66
Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG----- 175
            +      +C +  + F Y     I  E    +L D ++        + L +E+      
Sbjct: 67  DHPNVIRYYCSETTDRFLY-----IALELCNLNLQDLVESKNVSDENLKLQKEYNPISLL 121
Query: 176 RQLLESVAYMHDLRLIHTDLKPENILL-VSSEFIKLPGYKRSSSGEMPFRCLPKSSAI-K 233
           RQ+   VA++H L++IH DLKP+NIL+  SS F          +G    R L     + K
Sbjct: 122 RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFT-----ADQQTGAENLRILISDFGLCK 176
Query: 234 LIDFGSTAF-DNQNHSSIVSTRHYRAPEVILGLG-------WSYPCDMWSVGCILVELCT 285
            +D G   F  N N+ S   T  +RAPE++            +   D++S+GC+   +  
Sbjct: 177 KLDSGQXXFRXNLNNPS--GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYIL- 233
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
                                           S+G   +  + SR    E  +    I+ 
Sbjct: 234 --------------------------------SKGKHPFGDKYSR----ESNI----IRG 253
Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           +  LD +K    LH     +  TDL+  ++ +DP +R TA + L HP F
Sbjct: 254 IFSLDEMK---CLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLF 299

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 119/289 (41%), Gaps = 73/289 (25%)
Query: 36  TAAAA---KHVSPPR--RDDDREGHYVFNLGENLTPR-YKILSKMGEGTFGRVLECWDRQ 89
           TAAA    +H+  P    DDD +     N   ++  R Y IL ++G G   +V +  + +
Sbjct: 20  TAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 90  TQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-- 140
            Q   AIK V       +++  YR+    EI  L  L +       H  +I   +DY   
Sbjct: 80  KQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQ-------HSDKIIRLYDYEIT 127
Query: 141 -NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPE 198
             +I +V E     L  +LK+ K   P+     + + + +LE+V  +H   ++H+DLKP 
Sbjct: 128 DQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQHGIVHSDLKPA 184
Query: 199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSI-----VST 253
           N L+V                            +KLIDFG       + +S+     V T
Sbjct: 185 NFLIV-------------------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGT 219
Query: 254 RHYRAPEVILGLGWS-----------YPCDMWSVGCILVELCTGEALFQ 291
            +Y  PE I  +  S              D+WS+GCIL  +  G+  FQ
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 90
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 91  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 143
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 144 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 179
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +S V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 180 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 29/182 (15%)
Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGR 176
           L K    G S  +++ +WF+  +   ++ E+  P   LFDF+          +L R F  
Sbjct: 107 LLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFW 164
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+LE+V + H+  ++H D+K ENIL+              + GE+           KLID
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILI------------DLNRGEL-----------KLID 201
Query: 237 FGSTA-FDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE 294
           FGS A   +  ++    TR Y  PE I    +      +WS+G +L ++  G+  F+  E
Sbjct: 202 FGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE 261
Query: 295 NL 296
            +
Sbjct: 262 EI 263

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 101/236 (42%), Gaps = 38/236 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + I   +G+G FG V    ++Q +  +A+KV+         + +E + ++H  + +    
Sbjct: 17  FDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFK-------SQLEKEGVEHQLRREIEIQ 69
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++ N+F  R  I ++ E   P    + +  K+  F       F  +L +++
Sbjct: 70  SHLRHPNILRMYNYFHDRKRIYLMLE-FAPRGELYKELQKHGRFDEQRSATFMEELADAL 128
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
            Y H+ ++IH D+KPEN+L+         GYK    GE+           K+ DFG S  
Sbjct: 129 HYCHERKVIHRDIKPENLLM---------GYK----GEL-----------KIADFGWSVH 164
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
             +     +  T  Y  PE+I G       D+W  G +  E   G   F +  + E
Sbjct: 165 APSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE 220

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 53/238 (22%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS--IRKYRDAAMIEIDVLQHLAKNDKG 125
           +++  ++G G FG VL    + T E+VAIK  R     K R+   +EI +++ L      
Sbjct: 17  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL------ 70
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRN--------KY-------CPFPVDL 170
              + V  R   D         +KL P+    L           KY       C      
Sbjct: 71  NHPNVVSAREVPDG-------LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 123
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R     +  ++ Y+H+ R+IH DLKPENI+L        PG              P+  
Sbjct: 124 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQ-------PG--------------PQRL 162
Query: 231 AIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
             K+ID G     +Q    +  V T  Y APE++    ++   D WS G +  E  TG
Sbjct: 163 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 220

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 95/238 (39%), Gaps = 53/238 (22%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS--IRKYRDAAMIEIDVLQHLAKNDKG 125
           +++  ++G G FG VL    + T E+VAIK  R     K R+   +EI +++ L      
Sbjct: 16  WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL------ 69
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRN--------KY-------CPFPVDL 170
              + V  R   D         +KL P+    L           KY       C      
Sbjct: 70  NHPNVVSAREVPDG-------LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGP 122
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           +R     +  ++ Y+H+ R+IH DLKPENI+L        PG              P+  
Sbjct: 123 IRTLLSDISSALRYLHENRIIHRDLKPENIVLQ-------PG--------------PQRL 161
Query: 231 AIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
             K+ID G     +Q    +  V T  Y APE++    ++   D WS G +  E  TG
Sbjct: 162 IHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITG 219

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 43/230 (18%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           + ++  +GEG  G V    +R T+E VA+K+V   R       I+ ++  +   N +   
Sbjct: 8   WDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE--- 64
Query: 128 SHCVQIRNWFDYRNHICIVFEKL----GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                +  ++ +R    I +  L    G  LFD ++ +   P P    + F  QL+  V 
Sbjct: 65  ----NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPD--AQRFFHQLMAGVV 118
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           Y+H + + H D+KPEN+L                        L +   +K+ DFG +T F
Sbjct: 119 YLHGIGITHRDIKPENLL------------------------LDERDNLKISDFGLATVF 154
Query: 243 DNQNHSSIVS----TRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGE 287
              N   +++    T  Y APE++    + + P D+WS G +L  +  GE
Sbjct: 155 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 48/269 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 90  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
                        +  V T  Y +PE++         D+W++GCI+ +L  G   F+   
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
                A + +     PE    +A    EK
Sbjct: 239 EGLIFAKIIKLEYDFPEKFFPKARDLVEK 267

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/344 (22%), Positives = 137/344 (39%), Gaps = 84/344 (24%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           Y++   +G G    V   +    +E+VAIK + ++ K +  +M E+  L+ +    +   
Sbjct: 17  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQ-TSMDEL--LKEIQAMSQCHH 72
Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK------RNKYCPFPVDLVREFGRQLLE 180
            + V     F  ++ + +V + L G S+ D +K       +K        +    R++LE
Sbjct: 73  PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 132
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            + Y+H    IH D+K  NILL                GE          ++++ DFG +
Sbjct: 133 GLEYLHKNGQIHRDVKAGNILL----------------GE--------DGSVQIADFGVS 168
Query: 241 AF--------DNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQ 291
           AF         N+   + V T  + APEV+  + G+ +  D+WS G   +EL TG A + 
Sbjct: 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 228
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
            +  ++ L +  +   P  E                        G   +E +K   K   
Sbjct: 229 KYPPMKVLMLTLQNDPPSLE-----------------------TGVQDKEMLKKYGK--S 263
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
            + M+SL                L+ DP +R TA + L H FF+
Sbjct: 264 FRKMISL---------------CLQKDPEKRPTAAELLRHKFFQ 292

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 46/236 (19%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
           Y+++  +G G FG V     + T++  A+K++      K  D+A    E D++       
Sbjct: 76  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 130
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
              S   VQ+   F    ++ +V E + G  L + +        P    R +  +++ ++
Sbjct: 131 -ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLAL 186
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H +  IH D+KP+N+L                        L KS  +KL DFG+   
Sbjct: 187 DAIHSMGFIHRDVKPDNML------------------------LDKSGHLKLADFGTCMK 222
Query: 243 DNQNH----SSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
            N+       + V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 79/345 (22%), Positives = 137/345 (39%), Gaps = 84/345 (24%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           Y++   +G G    V   +    +E+VAIK + ++ K +  +M E+  L+ +    +   
Sbjct: 12  YELQEVIGSGATAVVQAAYCAPKKEKVAIKRI-NLEKCQ-TSMDEL--LKEIQAMSQCHH 67
Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK------RNKYCPFPVDLVREFGRQLLE 180
            + V     F  ++ + +V + L G S+ D +K       +K        +    R++LE
Sbjct: 68  PNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLE 127
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            + Y+H    IH D+K  NILL                GE          ++++ DFG +
Sbjct: 128 GLEYLHKNGQIHRDVKAGNILL----------------GE--------DGSVQIADFGVS 163
Query: 241 AF--------DNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQ 291
           AF         N+   + V T  + APEV+  + G+ +  D+WS G   +EL TG A + 
Sbjct: 164 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH 223
Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
            +  ++ L +  +   P  E                        G   +E +K   K   
Sbjct: 224 KYPPMKVLMLTLQNDPPSLE-----------------------TGVQDKEMLKKYGK--S 258
Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
            + M+SL                L+ DP +R TA + L H FF+ 
Sbjct: 259 FRKMISL---------------CLQKDPEKRPTAAELLRHKFFQK 288

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 97/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 86
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 87  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 139
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 140 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 175
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +S V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 176 AKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 46/236 (19%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
           Y+++  +G G FG V     + T++  A+K++      K  D+A    E D++       
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 125
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
              S   VQ+   F    ++ +V E + G  L + +        P    R +  +++ ++
Sbjct: 126 -ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLAL 181
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H +  IH D+KP+N+L                        L KS  +KL DFG+   
Sbjct: 182 DAIHSMGFIHRDVKPDNML------------------------LDKSGHLKLADFGTCMK 217
Query: 243 DNQNH----SSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
            N+       + V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 218 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 61/269 (22%), Positives = 107/269 (39%), Gaps = 48/269 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 90  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
                        +  V T  Y +PE++         D+W++GCI+ +L  G   F+   
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 238
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
                A + +     PE    +A    EK
Sbjct: 239 EGLIFAKIIKLEYDFPEKFFPKARDLVEK 267

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 118/289 (40%), Gaps = 73/289 (25%)
Query: 36  TAAAA---KHVSPPR--RDDDREGHYVFNLGENLTPR-YKILSKMGEGTFGRVLECWDRQ 89
           TAAA    +H+  P    DDD +     N   ++  R Y IL ++G G   +V +  + +
Sbjct: 20  TAAAKFERQHMDSPDLGTDDDDKASSSANECISVKGRIYSILKQIGSGGSSKVFQVLNEK 79
Query: 90  TQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-- 140
            Q   AIK V       +++  YR+    EI  L  L +       H  +I   +DY   
Sbjct: 80  KQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQQ-------HSDKIIRLYDYEIT 127
Query: 141 -NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPE 198
             +I +V E     L  +LK+ K   P+     + + + +LE+V  +H   ++H+DLKP 
Sbjct: 128 DQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWKNMLEAVHTIHQHGIVHSDLKPA 184
Query: 199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTR---- 254
           N L+V                            +KLIDFG       + +S+V       
Sbjct: 185 NFLIV-------------------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGA 219
Query: 255 -HYRAPEVILGLGWS-----------YPCDMWSVGCILVELCTGEALFQ 291
            +Y  PE I  +  S              D+WS+GCIL  +  G+  FQ
Sbjct: 220 VNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQ 268

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 97/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 88  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 140
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 141 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 176
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        ++ V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 177 AKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/236 (24%), Positives = 98/236 (41%), Gaps = 46/236 (19%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
           Y+++  +G G FG V     + T++  A+K++      K  D+A    E D++       
Sbjct: 76  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 130
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
              S   VQ+   F    ++ +V E + G  L + +        P    R +  +++ ++
Sbjct: 131 -ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLAL 186
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H +  IH D+KP+N+L                        L KS  +KL DFG+   
Sbjct: 187 DAIHSMGFIHRDVKPDNML------------------------LDKSGHLKLADFGTCMK 222
Query: 243 DNQNH----SSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
            N+       + V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 223 MNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 68/333 (20%), Positives = 127/333 (38%), Gaps = 88/333 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++ ++  +A+KV+         A +E   ++H  + +    
Sbjct: 10  FEIGRPLGKGKFGNVYLAREKNSKFILALKVLFK-------AQLEKAGVEHQLRREVEIQ 62
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           SH      +++  +F     + ++ E   P    + +  K   F       +  +L  ++
Sbjct: 63  SHLRHPNILRLYGYFHDSTRVYLILE-YAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           +Y H  ++IH D+KPEN+LL              S+GE+           K+ DFG S  
Sbjct: 122 SYCHSKKVIHRDIKPENLLL-------------GSAGEL-----------KIADFGWSVH 157
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   +    
Sbjct: 158 APSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKR 217
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           + R     P+ +                     EGA                        
Sbjct: 218 ISRVEFTFPDFVT--------------------EGA------------------------ 233
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  DL+  LL+++PS+R   R+ L HP+ 
Sbjct: 234 ------RDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 90  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 58.2 bits (139), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 37  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 92
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 93  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 145
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 146 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 181
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 182 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 80/336 (23%), Positives = 137/336 (40%), Gaps = 103/336 (30%)
Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY--RDAAMIEIDVL---QHLAKNDKGGS 127
           K+GEG+ G V    ++ +  +VA+K++  +RK   R+    E+ ++   QH         
Sbjct: 52  KIGEGSTGIVCLAREKHSGRQVAVKMM-DLRKQQRRELLFNEVVIMRDYQHF-------- 102
Query: 128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
            + V++   +     + ++ E L G +L D + + +     +  V E    +L+++AY+H
Sbjct: 103 -NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE---AVLQALAYLH 158
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---D 243
              +IH D+K ++ILL       L G                   +KL DFG  A    D
Sbjct: 159 AQGVIHRDIKSDSILLT------LDG------------------RVKLSDFGFCAQISKD 194
Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
                 +V T ++ APEVI    ++   D+WS+G +++E+  GE                
Sbjct: 195 VPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP--------------- 239
Query: 304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL-----DRLKNMVSL 358
                               YF             S   ++A+K+L      +LKN    
Sbjct: 240 -------------------PYF-------------SDSPVQAMKRLRDSPPPKLKNS--- 264
Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
              +    L D L  +L  DP ER TA++ L+HPF 
Sbjct: 265 --HKVSPVLRDFLERMLVRDPQERATAQELLDHPFL 298

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 90  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 35  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 90
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 91  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 143
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 144 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 179
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 180 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 88  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 140
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 141 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 176
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 34  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 89
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 90  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 143 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 178
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 179 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 100/245 (40%), Gaps = 52/245 (21%)
Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
           GHY+  LG+ L          G GTFG+V       T  +VA+K++  + IR       I
Sbjct: 16  GHYI--LGDTL----------GVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKI 63
Query: 112 --EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPV 168
             EI  L+           H +++       + I +V E + G  LFD++ +N       
Sbjct: 64  RREIQNLKLFR------HPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR--LDE 115
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
              R   +Q+L  V Y H   ++H DLKPEN+LL +                        
Sbjct: 116 KESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA------------------------ 151
Query: 229 SSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCT 285
               K+ DFG +    D +       + +Y APEVI G  ++ P  D+WS G IL  L  
Sbjct: 152 HMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC 211
Query: 286 GEALF 290
           G   F
Sbjct: 212 GTLPF 216

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 88  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 140
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 141 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 176
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 54/250 (21%)
Query: 53  EGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAM 110
           E H+ F   E+L    K L ++G G +G V +   + + + +A+K +RS    K +   +
Sbjct: 14  EQHWDFT-AEDL----KDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLL 68
Query: 111 IEIDVLQHLAKNDKGGSSHCVQIRNWFD--YRNHICIVFEKLGPSLFDFLKRNKYCPFPV 168
           +++DV+          SS C  I  ++   +R   C +  +L  + FD   +  Y     
Sbjct: 69  MDLDVVMR--------SSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLD- 119
Query: 169 DLVRE--FGRQLLESVAYMH----DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP 222
           D++ E   G+  L +V  ++    +L++IH D+KP NIL                     
Sbjct: 120 DVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNIL--------------------- 158
Query: 223 FRCLPKSSAIKLIDFGSTA--FDNQNHSSIVSTRHYRAPEVILG----LGWSYPCDMWSV 276
              L +S  IKL DFG +    D+   +     R Y APE I       G+    D+WS+
Sbjct: 159 ---LDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSL 215
Query: 277 GCILVELCTG 286
           G  L EL TG
Sbjct: 216 GITLYELATG 225

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 67/251 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
           Y IL ++G G   +V +  + + Q   AIK V       +++  YR+    EI  L  L 
Sbjct: 11  YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 65
Query: 121 KNDKGGSSHCVQIRNWFDYR---NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGR 176
           +       H  +I   +DY     +I +V E     L  +LK+ K   P+     + + +
Sbjct: 66  Q-------HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWK 115
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            +LE+V  +H   ++H+DLKP N L+V                            +KLID
Sbjct: 116 NMLEAVHTIHQHGIVHSDLKPANFLIV-------------------------DGMLKLID 150
Query: 237 FGSTAFDNQNHSSI-----VSTRHYRAPEVILGLGWS-----------YPCDMWSVGCIL 280
           FG       + +S+     V T +Y  PE I  +  S              D+WS+GCIL
Sbjct: 151 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 210
Query: 281 VELCTGEALFQ 291
             +  G+  FQ
Sbjct: 211 YYMTYGKTPFQ 221

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 57.8 bits (138), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQ 117
           +GE     ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL 
Sbjct: 62  VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 121
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
                    S + V     F     I I  E + G SL   LK+      P  ++ +   
Sbjct: 122 EC------NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSI 173
Query: 177 QLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            +++ + Y+ +  +++H D+KP NIL+             +S GE           IKL 
Sbjct: 174 AVIKGLTYLREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLC 209
Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           DFG S    +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G
Sbjct: 210 DFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 74/277 (26%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS--IRKYRDAAMIEIDVLQHLAK 121
           L  +Y +   +G+G++G V    + QT+   AIK++    IR+     +  I     L K
Sbjct: 24  LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMK 83
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK---------------RNKYCP 165
             K    +  ++   ++   +IC+V E   G  L D L                + + CP
Sbjct: 84  --KLHHPNIARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICP 141
Query: 166 FPV-----------------------DLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
            P                         L+    RQ+  ++ Y+H+  + H D+KPEN L 
Sbjct: 142 CPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF 201
Query: 203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNH------SSIVSTRH 255
            ++                      KS  IKL+DFG S  F   N+      ++   T +
Sbjct: 202 STN----------------------KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY 239
Query: 256 YRAPEVILGLGWSY--PCDMWSVGCILVELCTGEALF 290
           + APEV+     SY   CD WS G +L  L  G   F
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPF 276

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 48/269 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 11  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 66
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 67  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 119
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 120 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 155
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
                        +  V T  Y +PE++         D+W++GCI+ +L  G   F+   
Sbjct: 156 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 215
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
                  + +     PE    +A    EK
Sbjct: 216 EYLIFQKIIKLEYDFPEKFFPKARDLVEK 244

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 48/269 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 12  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 67
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 68  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 120
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 121 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 156
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
                        +  V T  Y +PE++         D+W++GCI+ +L  G   F+   
Sbjct: 157 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 216
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
                  + +     PE    +A    EK
Sbjct: 217 EYLIFQKIIKLEYDFPEKFFPKARDLVEK 245

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQ 117
           +GE     ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL 
Sbjct: 27  VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 86
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
                    S + V     F     I I  E + G SL   LK  K    P  ++ +   
Sbjct: 87  EC------NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSI 138
Query: 177 QLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            +++ + Y+ +  +++H D+KP NIL+             +S GE           IKL 
Sbjct: 139 AVIKGLTYLREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLC 174
Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           DFG S    +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G
Sbjct: 175 DFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 48/269 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 10  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 65
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 66  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 118
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 119 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 154
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
                        +  V T  Y +PE++         D+W++GCI+ +L  G   F+   
Sbjct: 155 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 214
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
                  + +     PE    +A    EK
Sbjct: 215 EYLIFQKIIKLEYDFPEKFFPKARDLVEK 243

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/269 (22%), Positives = 106/269 (39%), Gaps = 48/269 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 9   FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 64
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 65  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 117
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 118 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 153
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
                        +  V T  Y +PE++         D+W++GCI+ +L  G   F+   
Sbjct: 154 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGN 213
Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEK 323
                  + +     PE    +A    EK
Sbjct: 214 EYLIFQKIIKLEYDFPEKFFPKARDLVEK 242

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 75/334 (22%), Positives = 128/334 (38%), Gaps = 88/334 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++I   +G+G FG V    ++++   VA+KV+         + IE + ++H  + +    
Sbjct: 25  FEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFK-------SQIEKEGVEHQLRREIEIQ 77
Query: 128 SH-----CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
           +H      +++ N+F  R  I ++ E   P    + +  K C F          +L +++
Sbjct: 78  AHLHHPNILRLYNYFYDRRRIYLILE-YAPRGELYKELQKSCTFDEQRTATIMEELADAL 136
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
            Y H  ++IH D+KPEN+LL                             +K+ DFG S  
Sbjct: 137 MYCHGKKVIHRDIKPENLLLGL------------------------KGELKIADFGWSVH 172
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +    ++  T  Y  PE+I G   +   D+W +G +  EL  G   F           
Sbjct: 173 APSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF----------- 221
Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
                                            E A   E+ + + K+D LK   S+   
Sbjct: 222 ---------------------------------ESASHNETYRRIVKVD-LKFPASV--- 244
Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
              +   DL+  LLR++PSERL   Q   HP+ R
Sbjct: 245 --PTGAQDLISKLLRHNPSERLPLAQVSAHPWVR 276

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 67/251 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
           Y IL ++G G   +V +  + + Q   AIK V       +++  YR+    EI  L  L 
Sbjct: 30  YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 121 KNDKGGSSHCVQIRNWFDYR---NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGR 176
           +       H  +I   +DY     +I +V E     L  +LK+ K   P+     + + +
Sbjct: 85  Q-------HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWK 134
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            +LE+V  +H   ++H+DLKP N L+V                            +KLID
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIV-------------------------DGMLKLID 169
Query: 237 FGSTAFDNQNHSSI-----VSTRHYRAPEVILGLGWS-----------YPCDMWSVGCIL 280
           FG       + +S+     V T +Y  PE I  +  S              D+WS+GCIL
Sbjct: 170 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 229
Query: 281 VELCTGEALFQ 291
             +  G+  FQ
Sbjct: 230 YYMTYGKTPFQ 240

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 31  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 86
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 87  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 139
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 140 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 175
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 176 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 16  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 71
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 72  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 124
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 125 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 160
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 161 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQ 117
           LGE     ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL 
Sbjct: 3   LGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 62
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
                    S + V     F     I I  E + G SL   LK  K    P  ++ +   
Sbjct: 63  EC------NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSI 114
Query: 177 QLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            +++ + Y+ +  +++H D+KP NIL+             +S GE           IKL 
Sbjct: 115 AVIKGLTYLREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLC 150
Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           DFG S    ++  +  V TR Y +PE + G  +S   D+WS+G  LVE+  G
Sbjct: 151 DFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 67/251 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
           Y IL ++G G   +V +  + + Q   AIK V       +++  YR+    EI  L  L 
Sbjct: 10  YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 64
Query: 121 KNDKGGSSHCVQIRNWFDYR---NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGR 176
           +       H  +I   +DY     +I +V E     L  +LK+ K   P+     + + +
Sbjct: 65  Q-------HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWK 114
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            +LE+V  +H   ++H+DLKP N L+V                            +KLID
Sbjct: 115 NMLEAVHTIHQHGIVHSDLKPANFLIV-------------------------DGMLKLID 149
Query: 237 FGSTAFDNQNHSSI-----VSTRHYRAPEVILGLGWS-----------YPCDMWSVGCIL 280
           FG       + +S+     V T +Y  PE I  +  S              D+WS+GCIL
Sbjct: 150 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 209
Query: 281 VELCTGEALFQ 291
             +  G+  FQ
Sbjct: 210 YYMTYGKTPFQ 220

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 67/251 (26%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
           Y IL ++G G   +V +  + + Q   AIK V       +++  YR+    EI  L  L 
Sbjct: 14  YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 68
Query: 121 KNDKGGSSHCVQIRNWFDYR---NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGR 176
           +       H  +I   +DY     +I +V E     L  +LK+ K   P+     + + +
Sbjct: 69  Q-------HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWK 118
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            +LE+V  +H   ++H+DLKP N L+V                            +KLID
Sbjct: 119 NMLEAVHTIHQHGIVHSDLKPANFLIV-------------------------DGMLKLID 153
Query: 237 FGSTAFDNQNHSSI-----VSTRHYRAPEVILGLGWS-----------YPCDMWSVGCIL 280
           FG       + +S+     V T +Y  PE I  +  S              D+WS+GCIL
Sbjct: 154 FGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCIL 213
Query: 281 VELCTGEALFQ 291
             +  G+  FQ
Sbjct: 214 YYMTYGKTPFQ 224

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRKYRDAAMIEIDVLQHLAKNDKG 125
           L ++G G+FG V    D +  E VAIK +     +S  K++D  + E+  LQ L      
Sbjct: 59  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQKLRH---- 113
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
              + +Q R  +   +   +V E    S  D L+ +K  P     +       L+ +AY+
Sbjct: 114 --PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYL 170
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H   +IH D+K  NILL        PG                   +KL DFGS +    
Sbjct: 171 HSHNMIHRDVKAGNILLSE------PGL------------------VKLGDFGSASI-MA 205
Query: 246 NHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELC 284
             +  V T ++ APEVIL +    +    D+WS+G   +EL 
Sbjct: 206 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 84/222 (37%), Gaps = 42/222 (18%)
Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           ++G G+FG V    D+QT  + A+K VR +  +R   ++    L          S   V 
Sbjct: 81  RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEELMACAGLT---------SPRIVP 130
Query: 133 IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIH 192
           +         + I  E L       L + + C  P D    +  Q LE + Y+H  R++H
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYLGQALEGLEYLHSRRILH 189
Query: 193 TDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--------DN 244
            D+K +N+LL S                         S   L DFG            D 
Sbjct: 190 GDVKADNVLLSSD-----------------------GSHAALCDFGHAVCLQPDGLGKDL 226
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                I  T  + APEV+LG       D+WS  C+++ +  G
Sbjct: 227 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 48/271 (17%)
Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
           GHYV  LG+ L          G GTFG+V     + T  +VA+K++  + IR       I
Sbjct: 11  GHYV--LGDTL----------GVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKI 58
Query: 112 EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL 170
           + ++ Q+L         H +++           +V E + G  LFD++   K+       
Sbjct: 59  KREI-QNLKLFR---HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEEME 112
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
            R   +Q+L +V Y H   ++H DLKPEN+LL +                          
Sbjct: 113 ARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA------------------------HM 148
Query: 231 AIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGE 287
             K+ DFG +    D +   +   + +Y APEVI G  ++ P  D+WS G IL  L  G 
Sbjct: 149 NAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGT 208
Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRAS 318
             F           +   +  +PE++ R  +
Sbjct: 209 LPFDDEHVPTLFKKIRGGVFYIPEYLNRSVA 239

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/232 (26%), Positives = 102/232 (43%), Gaps = 37/232 (15%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQ 117
           +GE     ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL 
Sbjct: 19  VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLH 78
Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
                    S + V     F     I I  E + G SL   LK  K    P  ++ +   
Sbjct: 79  EC------NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK--KAGRIPEQILGKVSI 130
Query: 177 QLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            +++ + Y+ +  +++H D+KP NIL+             +S GE           IKL 
Sbjct: 131 AVIKGLTYLREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLC 166
Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           DFG S    +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G
Sbjct: 167 DFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 218

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 96/232 (41%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 39  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 94
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 95  ----DHPFFVKLYFCFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 147
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 148 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 183
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 184 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 95/222 (42%), Gaps = 41/222 (18%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVV-----RSIRKYRDAAMIEIDVLQHLAKNDKG 125
           L ++G G+FG V    D +  E VAIK +     +S  K++D  + E+  LQ L      
Sbjct: 20  LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDI-IKEVRFLQKLRH---- 74
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
              + +Q R  +   +   +V E    S  D L+ +K  P     +       L+ +AY+
Sbjct: 75  --PNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYL 131
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H   +IH D+K  NILL        PG                   +KL DFGS +    
Sbjct: 132 HSHNMIHRDVKAGNILLSE------PGL------------------VKLGDFGSASI-MA 166
Query: 246 NHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELC 284
             +  V T ++ APEVIL +    +    D+WS+G   +EL 
Sbjct: 167 PANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 95/232 (40%), Gaps = 48/232 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKND 123
           +K    +GEG+F   +   +  T    AIK++  R I K      +  E DV+  L    
Sbjct: 32  FKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87
Query: 124 KGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                H   ++ +F +++    +  + + K G  L  +++  K   F     R +  +++
Sbjct: 88  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNG-ELLKYIR--KIGSFDETCTRFYTAEIV 140
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y+H   +IH DLKPENIL                        L +   I++ DFG+
Sbjct: 141 SALEYLHGKGIIHRDLKPENIL------------------------LNEDMHIQITDFGT 176
Query: 240 TAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                        +  V T  Y +PE++         D+W++GCI+ +L  G
Sbjct: 177 AKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 44/238 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           ++++  K+G G+FG +    + QT E VAIK+  +++      + E  + + L      G
Sbjct: 8   KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL-ENVKTKHPQLLYESKIYRILQ-----G 61
Query: 127 SSHCVQIRNWFDYR-NHICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQLLESVA 183
            +    +R WF    ++  +V + LGPSL D      +C   + L  V     Q++  V 
Sbjct: 62  GTGIPNVR-WFGVEGDYNVLVMDLLGPSLEDLFN---FCSRKLSLKTVLMLADQMINRVE 117
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STA 241
           ++H    +H D+KP+N L+         G  R            +++ + +IDFG     
Sbjct: 118 FVHSKSFLHRDIKPDNFLM---------GLGR------------RANQVYIIDFGLAKKY 156
Query: 242 FDNQNHSSI--------VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
            D   H  I          T  Y +    LG+  S   D+ S+G +L+    G   +Q
Sbjct: 157 RDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQ 214

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 73/339 (21%), Positives = 133/339 (39%), Gaps = 84/339 (24%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAK 121
           L  +Y I   +G G FG V  C +  +++    K V+   K  D  ++  EI +L ++A+
Sbjct: 3   LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKV--KGTDQVLVKKEISIL-NIAR 59
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDL--VREFGRQLL 179
           +      + + +   F+    + ++FE +  S  D  +R     F ++   +  +  Q+ 
Sbjct: 60  H-----RNILHLHESFESMEELVMIFEFI--SGLDIFERINTSAFELNEREIVSYVHQVC 112
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           E++ ++H   + H D++PENI+  +                       +SS IK+I+FG 
Sbjct: 113 EALQFLHSHNIGHFDIRPENIIYQTR----------------------RSSTIKIIEFGQ 150
Query: 240 T--AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                   N   + +   Y APEV      S   DMWS+G ++  L +G   F    N +
Sbjct: 151 ARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQ 210
Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
              ++E  +                      +   + E A    SI+A+  +DR      
Sbjct: 211 ---IIENIM---------------------NAEYTFDEEAFKEISIEAMDFVDR------ 240
Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                           LL  +   R+TA +AL HP+ + 
Sbjct: 241 ----------------LLVKERKSRMTASEALQHPWLKQ 263

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 103/240 (42%), Gaps = 37/240 (15%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
           ++IL  +G G FG V     +   +  A+K++      + A       E DVL +     
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----- 130
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            G S     +   F   N++ +V +  +G  L   L + +    P ++ R +  +++ ++
Sbjct: 131 -GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFED-RLPEEMARFYLAEMVIAI 188
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H L  +H D+KP+NIL+  +  I+L  +                S +KL++ G+   
Sbjct: 189 DSVHQLHYVHRDIKPDNILMDMNGHIRLADF---------------GSCLKLMEDGTV-- 231
Query: 243 DNQNHSSIVSTRHYRAPEVIL----GLGWSYP-CDMWSVGCILVELCTGEALFQTHENLE 297
                S  V T  Y +PE++     G G   P CD WS+G  + E+  GE  F     +E
Sbjct: 232 ---QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVE 288

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
           ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL         
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------ 61
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S + V     F     I I  E + G SL   LK+      P  ++ +    +++ + Y
Sbjct: 62  NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTY 119
Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           + +  +++H D+KP NIL+             +S GE           IKL DFG S   
Sbjct: 120 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 155
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
            +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 105/247 (42%), Gaps = 56/247 (22%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
           Y++L  +G+G F +V       T   VAIK++        S++K +R+  +++I  L H 
Sbjct: 14  YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI--LNH- 70
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    + V++    +    + ++ E   G  +FD+L    +        R   RQ+
Sbjct: 71  --------PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQI 120
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + +V Y H  R++H DLK EN+LL +                           IK+ DFG
Sbjct: 121 VSAVQYCHQKRIVHRDLKAENLLLDA------------------------DMNIKIADFG 156
Query: 239 STAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQT 292
              F N+        +   +  Y APE+  G  +  P  D+WS+G IL  L +G   F  
Sbjct: 157 ---FSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 213
Query: 293 HENLEHL 299
            +NL+ L
Sbjct: 214 -QNLKEL 219

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 69/273 (25%), Positives = 111/273 (40%), Gaps = 52/273 (19%)
Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEI 113
           GHYV  LG+ L          G GTFG+V     + T  +VA+K++   +K R      +
Sbjct: 11  GHYV--LGDTL----------GVGTFGKVKIGEHQLTGHKVAVKILNR-QKIR-----SL 52
Query: 114 DVLQHLAKNDKGGS----SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPV 168
           DV+  + +  +        H +++           +V E + G  LFD++   K+     
Sbjct: 53  DVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYI--CKHGRVEE 110
Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
              R   +Q+L +V Y H   ++H DLKPEN+LL +                        
Sbjct: 111 MEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA------------------------ 146
Query: 229 SSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCT 285
               K+ DFG +    D +       + +Y APEVI G  ++ P  D+WS G IL  L  
Sbjct: 147 HMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC 206
Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRAS 318
           G   F           +   +  +PE++ R  +
Sbjct: 207 GTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVA 239

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 56/222 (25%), Positives = 85/222 (38%), Gaps = 42/222 (18%)
Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           ++G G+FG V    D+QT  + A+K VR +  +R   ++    L          S   V 
Sbjct: 100 RLGRGSFGEVHRMEDKQTGFQCAVKKVR-LEVFRAEELMACAGLT---------SPRIVP 149
Query: 133 IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIH 192
           +         + I  E L       L + + C  P D    +  Q LE + Y+H  R++H
Sbjct: 150 LYGAVREGPWVNIFMELLEGGSLGQLVKEQGC-LPEDRALYYLGQALEGLEYLHSRRILH 208
Query: 193 TDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHS- 248
            D+K +N+LL S                         S   L DFG       D    S 
Sbjct: 209 GDVKADNVLLSSD-----------------------GSHAALCDFGHAVCLQPDGLGKSL 245
Query: 249 ----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                I  T  + APEV+LG       D+WS  C+++ +  G
Sbjct: 246 LTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
           ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL         
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------ 61
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S + V     F     I I  E + G SL   LK+      P  ++ +    +++ + Y
Sbjct: 62  NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTY 119
Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           + +  +++H D+KP NIL+             +S GE           IKL DFG S   
Sbjct: 120 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 155
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
            +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
           ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL         
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------ 61
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S + V     F     I I  E + G SL   LK+      P  ++ +    +++ + Y
Sbjct: 62  NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTY 119
Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           + +  +++H D+KP NIL+             +S GE           IKL DFG S   
Sbjct: 120 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 155
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
            +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 98/225 (43%), Gaps = 34/225 (15%)
Query: 69  KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKN 122
           K +  +GEG FG+V L C+D     T E VA+K +++    ++R     EID+L+ L   
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                  C +       +  + + +  LG SL D+L R+      +  +  F +Q+ E +
Sbjct: 94  HIIKYKGCCEDAGAASLQ--LVMEYVPLG-SLRDYLPRHS---IGLAQLLLFAQQICEGM 147
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGST 240
           AY+H    IH DL   N+LL +   +K+  +  +       + +P+      +  D  S 
Sbjct: 148 AYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLA-------KAVPEGHEXYRVREDGDSP 200
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            F             + APE +    + Y  D+WS G  L EL T
Sbjct: 201 VF-------------WYAPECLKEYKFYYASDVWSFGVTLYELLT 232

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 117/283 (41%), Gaps = 46/283 (16%)
Query: 68  YKILSKMGEGTFGRVLEC---WDRQTQERVAIKVVRS---IRKYRDAAMI--EIDVLQHL 119
           +++L  +G+G +G+V +        T +  A+KV++    +R  +D A    E ++L+ +
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                      V +   F     + ++ E L G  LF  L+R     F  D    +  ++
Sbjct: 79  K------HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
             ++ ++H   +I+ DLKPENI+L                             +KL DFG
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIML------------------------NHQGHVKLTDFG 166
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
               +  D     +   T  Y APE+++  G +   D WS+G ++ ++ TG   F     
Sbjct: 167 LCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRR--GSRLNWPEG 336
            + +  + +    LP ++ + A    +K  +R   SRL    G
Sbjct: 227 KKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPG 269

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 106/244 (43%), Gaps = 50/244 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
           Y++L  +G+G F +V       T + VA+K++        S++K +R+  +++  VL H 
Sbjct: 9   YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK--VLNH- 65
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    + V++    +    + +V E   G  +FD+L  + +        R   RQ+
Sbjct: 66  --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGW--MKEKEARAKFRQI 115
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + +V Y H   ++H DLK EN+LL +                           IK+ DFG
Sbjct: 116 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 151
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
            S  F   N   +   +  Y APE+  G  +  P  D+WS+G IL  L +G   F   +N
Sbjct: 152 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 210
Query: 296 LEHL 299
           L+ L
Sbjct: 211 LKEL 214

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/236 (23%), Positives = 97/236 (41%), Gaps = 46/236 (19%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMI--EIDVLQHLAKND 123
           Y ++  +G G FG V     + +Q+  A+K++      K  D+A    E D++       
Sbjct: 77  YDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 131
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
              S   VQ+   F    ++ +V E + G  L + +        P    + +  +++ ++
Sbjct: 132 -ANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVLAL 187
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
             +H + LIH D+KP+N+L                        L K   +KL DFG+   
Sbjct: 188 DAIHSMGLIHRDVKPDNML------------------------LDKHGHLKLADFGTCMK 223
Query: 243 DNQNH----SSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF 290
            ++       + V T  Y +PEV+   G    +   CD WSVG  L E+  G+  F
Sbjct: 224 MDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
           ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL         
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------ 61
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S + V     F     I I  E + G SL   LK+      P  ++ +    +++ + Y
Sbjct: 62  NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTY 119
Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           + +  +++H D+KP NIL+             +S GE           IKL DFG S   
Sbjct: 120 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 155
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
            +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 99/224 (44%), Gaps = 37/224 (16%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
           ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL         
Sbjct: 8   FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------ 61
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S + V     F     I I  E + G SL   LK+      P  ++ +    +++ + Y
Sbjct: 62  NSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTY 119
Query: 185 MHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           + +  +++H D+KP NIL+             +S GE           IKL DFG S   
Sbjct: 120 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 155
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
            +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G
Sbjct: 156 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           ++ +G+G FG+V++  +       AIK +R   +     + E+ +L  L        +H 
Sbjct: 11  IAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASL--------NHQ 62
Query: 131 VQIR---NWFDYRNHI---------CIVFEKL----GPSLFDFLKRNKYCPFPVDLVREF 174
             +R    W + RN +           +F +       +L+D +          +  R F
Sbjct: 63  YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
            RQ+LE+++Y+H   +IH +LKP NI +  S  +K+  +  +       + + +S  I  
Sbjct: 123 -RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLA-------KNVHRSLDILK 174
Query: 235 IDFGSTAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVE 282
           +D  +    + N +S + T  Y A EV+ G G ++   D +S+G I  E
Sbjct: 175 LDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE 223

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 67/254 (26%), Positives = 102/254 (40%), Gaps = 73/254 (28%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
           Y IL ++G G   +V +  + + Q   AIK V       +++  YR+    EI  L  L 
Sbjct: 30  YSILKQIGSGGSSKVFQVLNEKKQ-IYAIKYVNLEEADNQTLDSYRN----EIAYLNKLQ 84
Query: 121 KNDKGGSSHCVQIRNWFDYR---NHICIVFEKLGPSLFDFLKRNKYC-PFPVDLVREFGR 176
           +       H  +I   +DY     +I +V E     L  +LK+ K   P+     + + +
Sbjct: 85  Q-------HSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWER---KSYWK 134
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            +LE+V  +H   ++H+DLKP N L+V                            +KLID
Sbjct: 135 NMLEAVHTIHQHGIVHSDLKPANFLIV-------------------------DGMLKLID 169
Query: 237 FGSTAFDNQNH--------SSIVSTRHYRAPEVILGLGWS-----------YPCDMWSVG 277
           FG     NQ           S V T +Y  PE I  +  S              D+WS+G
Sbjct: 170 FG---IANQMQPDXXXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLG 226
Query: 278 CILVELCTGEALFQ 291
           CIL  +  G+  FQ
Sbjct: 227 CILYYMTYGKTPFQ 240

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 50/244 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
           Y++L  +G+G F +V       T + VA+K++        S++K +R+  +++  VL H 
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK--VLNH- 72
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    + V++    +    + +V E   G  +FD+L    +        R   RQ+
Sbjct: 73  --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + +V Y H   ++H DLK EN+LL +                           IK+ DFG
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 158
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
            S  F   N   +   +  Y APE+  G  +  P  D+WS+G IL  L +G   F   +N
Sbjct: 159 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 217
Query: 296 LEHL 299
           L+ L
Sbjct: 218 LKEL 221

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 104/247 (42%), Gaps = 56/247 (22%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
           Y++L  +G+G F +V       T   VAIK++        S++K +R+  +++I  L H 
Sbjct: 17  YRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKI--LNH- 73
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    + V++    +    + ++ E   G  +FD+L    +        R   RQ+
Sbjct: 74  --------PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLV--AHGRMKEKEARSKFRQI 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + +V Y H  R++H DLK EN+LL +                           IK+ DFG
Sbjct: 124 VSAVQYCHQKRIVHRDLKAENLLLDA------------------------DMNIKIADFG 159
Query: 239 STAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQT 292
              F N+        +      Y APE+  G  +  P  D+WS+G IL  L +G   F  
Sbjct: 160 ---FSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG 216
Query: 293 HENLEHL 299
            +NL+ L
Sbjct: 217 -QNLKEL 222

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 105/244 (43%), Gaps = 50/244 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
           Y++L  +G+G F +V       T + VA+K++        S++K +R+  +++  VL H 
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK--VLNH- 72
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    + V++    +    + +V E   G  +FD+L    +        R   RQ+
Sbjct: 73  --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + +V Y H   ++H DLK EN+LL +                           IK+ DFG
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 158
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
            S  F   N   +   +  Y APE+  G  +  P  D+WS+G IL  L +G   F   +N
Sbjct: 159 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 217
Query: 296 LEHL 299
           L+ L
Sbjct: 218 LKEL 221

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 105/244 (43%), Gaps = 50/244 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
           Y++   +G+G F +V       T   VA+K++        S++K +R+  +++I  L H 
Sbjct: 17  YRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKI--LNH- 73
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    + V++    +    + +V E   G  +FD+L    +        R   RQ+
Sbjct: 74  --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + +V Y H   ++H DLK EN+LL                G+M          IK+ DFG
Sbjct: 124 VSAVQYCHQKYIVHRDLKAENLLL---------------DGDM---------NIKIADFG 159
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
            S  F   N   +   +  Y APE+  G  +  P  D+WS+G IL  L +G   F   +N
Sbjct: 160 FSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 218
Query: 296 LEHL 299
           L+ L
Sbjct: 219 LKEL 222

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           +G G FG+V   +     + VA+K  R       +  IE +V Q           + + +
Sbjct: 15  IGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIE-NVRQEAKLFAMLKHPNIIAL 71
Query: 134 RNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD---LR 189
           R       ++C+V E   G  L   L   +    P D++  +  Q+   + Y+HD   + 
Sbjct: 72  RGVCLKEPNLCLVMEFARGGPLNRVLSGKR---IPPDILVNWAVQIARGMNYLHDEAIVP 128
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHS 248
           +IH DLK  NIL++          ++  +G++  + L      K+ DFG +  +      
Sbjct: 129 IIHRDLKSSNILIL----------QKVENGDLSNKIL------KITDFGLAREWHRTTKM 172
Query: 249 SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE---HLAMMERA 305
           S      + APEVI    +S   D+WS G +L EL TGE  F+  + L     +AM + A
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA 232
Query: 306 LGPLP 310
           L P+P
Sbjct: 233 L-PIP 236

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 96/242 (39%), Gaps = 42/242 (17%)
Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN 122
           ++ P +++  K+G G FG +    +  T E VAIK+   I+       +E    + L+  
Sbjct: 1   SMGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLS-- 57
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLL 179
               +    Q+  +     +  +V E LGPSL   FD   R     F +  V     QL+
Sbjct: 58  ---ATEGVPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLI 110
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
             + Y+H   LI+ D+KPEN L      +  PG KR               AI +IDFG 
Sbjct: 111 TRMEYVHTKSLIYRDVKPENFL------VGRPGTKR-------------QHAIHIIDFGL 151
Query: 239 ---------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
                          + H S+  T  Y +    LG   S   D+ ++G + +    G   
Sbjct: 152 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP 211
Query: 290 FQ 291
           +Q
Sbjct: 212 WQ 213

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 69  KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKN 122
           K +  +GEG FG+V L C+D     T E VA+K +++    ++R     EID+L+ L   
Sbjct: 17  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                  C + +   +    + + +  LG SL D+L R+      +  +  F +Q+ E +
Sbjct: 77  HIIKYKGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS---IGLAQLLLFAQQICEGM 130
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGST 240
           AY+H    IH +L   N+LL +   +K+  +  +       + +P+      +  D  S 
Sbjct: 131 AYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLA-------KAVPEGHEYYRVREDGDSP 183
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            F             + APE +    + Y  D+WS G  L EL T
Sbjct: 184 VF-------------WYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 50/244 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
           Y++L  +G+G F +V       T + VA+K++        S++K +R+  +++  VL H 
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK--VLNH- 72
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    + V++    +    + +V E   G  +FD+L    +        R   RQ+
Sbjct: 73  --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + +V Y H   ++H DLK EN+LL +                           IK+ DFG
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 158
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
            S  F   N   +      Y APE+  G  +  P  D+WS+G IL  L +G   F   +N
Sbjct: 159 FSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 217
Query: 296 LEHL 299
           L+ L
Sbjct: 218 LKEL 221

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/283 (22%), Positives = 116/283 (40%), Gaps = 46/283 (16%)
Query: 68  YKILSKMGEGTFGRVLEC---WDRQTQERVAIKVVRS---IRKYRDAAMI--EIDVLQHL 119
           +++L  +G+G +G+V +        T +  A+KV++    +R  +D A    E ++L+ +
Sbjct: 19  FELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                      V +   F     + ++ E L G  LF  L+R     F  D    +  ++
Sbjct: 79  K------HPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEI 130
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
             ++ ++H   +I+ DLKPENI+L                             +KL DFG
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIML------------------------NHQGHVKLTDFG 166
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
               +  D         T  Y APE+++  G +   D WS+G ++ ++ TG   F     
Sbjct: 167 LCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR 226
Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRR--GSRLNWPEG 336
            + +  + +    LP ++ + A    +K  +R   SRL    G
Sbjct: 227 KKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPG 269

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 104/238 (43%), Gaps = 36/238 (15%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
           ++ +  +G+G+FG+V+    ++T +  A+KV++     +D      M E  +L  LA+N 
Sbjct: 25  FEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS-LARN- 82
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   Q+   F   + +  V E +  G  +F   K  +   F     R +  +++ +
Sbjct: 83  ---HPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR---FDEARARFYAAEIISA 136
Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + ++HD  +I+ DLK +N+LL      KL  +     G               I  G T 
Sbjct: 137 LMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEG---------------ICNGVTT 181
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
                 ++   T  Y APE++  + +    D W++G +L E+  G A F+  EN + L
Sbjct: 182 ------ATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA-ENEDDL 232

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/225 (25%), Positives = 99/225 (44%), Gaps = 34/225 (15%)
Query: 69  KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKN 122
           K +  +GEG FG+V L C+D     T E VA+K +++    ++R     EID+L+ L   
Sbjct: 17  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHE 76
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                  C + +   +    + + +  LG SL D+L R+      +  +  F +Q+ E +
Sbjct: 77  HIIKYKGCCEDQG--EKSLQLVMEYVPLG-SLRDYLPRHS---IGLAQLLLFAQQICEGM 130
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGST 240
           AY+H    IH +L   N+LL +   +K+  +  + +       +P+      +  D  S 
Sbjct: 131 AYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKA-------VPEGHEYYRVREDGDSP 183
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            F             + APE +    + Y  D+WS G  L EL T
Sbjct: 184 VF-------------WYAPECLKEYKFYYASDVWSFGVTLYELLT 215

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 105/244 (43%), Gaps = 50/244 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
           Y++L  +G+G F +V       T + VA++++        S++K +R+  +++  VL H 
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK--VLNH- 72
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    + V++    +    + +V E   G  +FD+L    +        R   RQ+
Sbjct: 73  --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + +V Y H   ++H DLK EN+LL +                           IK+ DFG
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 158
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
            S  F   N   +   +  Y APE+  G  +  P  D+WS+G IL  L +G   F   +N
Sbjct: 159 FSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 217
Query: 296 LEHL 299
           L+ L
Sbjct: 218 LKEL 221

>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3) Length = 350

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           ++G G+FG V    D+QT  + A+K VR          +E+  ++ L       S   V 
Sbjct: 79  RLGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVP 128
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +         + I  E L G SL   +K+      P D    +  Q LE + Y+H  R++
Sbjct: 129 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRIL 186
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHS 248
           H D+K +N+LL S                         S   L DFG       D    S
Sbjct: 187 HGDVKADNVLLSSD-----------------------GSRAALCDFGHALCLQPDGLGKS 223
Query: 249 -----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                 I  T  + APEV++G       D+WS  C+++ +  G
Sbjct: 224 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 266

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 63/243 (25%), Positives = 99/243 (40%), Gaps = 48/243 (19%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG-- 125
           Y++L  +G+G F +V       T + VA+K++       D   +    LQ L +  +   
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVKII-------DKTQLNSSSLQKLFREVRIXK 68
Query: 126 --GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFL---KRNKYCPFPVDLVREFGRQLL 179
                + V++    +    + +V E   G  +FD+L    R K         R   RQ++
Sbjct: 69  VLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE-----ARAKFRQIV 123
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
            +V Y H   ++H DLK EN+LL +                           IK+ DFG 
Sbjct: 124 SAVQYCHQKFIVHRDLKAENLLLDA------------------------DXNIKIADFGF 159
Query: 239 STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHENL 296
           S  F   N   +      Y APE+  G  +  P  D+WS+G IL  L +G   F   +NL
Sbjct: 160 SNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QNL 218
Query: 297 EHL 299
           + L
Sbjct: 219 KEL 221

>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase (nik) Length = 352

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/223 (26%), Positives = 89/223 (39%), Gaps = 44/223 (19%)
Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           ++G G+FG V    D+QT  + A+K VR          +E+  ++ L       S   V 
Sbjct: 81  RVGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVP 130
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +         + I  E L G SL   +K+      P D    +  Q LE + Y+H  R++
Sbjct: 131 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRIL 188
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHS 248
           H D+K +N+LL             SS G          S   L DFG       D    S
Sbjct: 189 HGDVKADNVLL-------------SSDG----------SRAALCDFGHALCLQPDGLGKS 225
Query: 249 -----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                 I  T  + APEV++G       D+WS  C+++ +  G
Sbjct: 226 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 268

>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K      V
Sbjct: 274 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK-----LV 325
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
           Q+         I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 326 QLYAVVS-EEPIYIVTEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 382
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 383 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 418
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 419 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 478
Query: 304 RA 305
           R 
Sbjct: 479 RG 480

>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase (nik) Bound To A 2-(aminothiazoly)phenol (cmp2) Length = 336

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 87/223 (39%), Gaps = 44/223 (19%)
Query: 73  KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           ++G G+FG V    D+QT  + A+K VR          +E+  ++ L       S   V 
Sbjct: 65  RVGRGSFGEVHRMKDKQTGFQCAVKKVR----------LEVFRVEELVACAGLSSPRIVP 114
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +         + I  E L G SL   +K+      P D    +  Q LE + Y+H  R++
Sbjct: 115 LYGAVREGPWVNIFMELLEGGSLGQLIKQMGC--LPEDRALYYLGQALEGLEYLHTRRIL 172
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---DNQNHS 248
           H D+K +N+LL S                         S   L DFG       D    S
Sbjct: 173 HGDVKADNVLLSSD-----------------------GSRAALCDFGHALCLQPDGLGKS 209
Query: 249 -----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                 I  T  + APEV++G       D+WS  C+++ +  G
Sbjct: 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNG 252

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 50/244 (20%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRK-YRDAAMIEIDVLQHL 119
           Y++L  +G+G F +V       T + VA++++        S++K +R+  +++  VL H 
Sbjct: 16  YRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK--VLNH- 72
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    + V++    +    + +V E   G  +FD+L    +        R   RQ+
Sbjct: 73  --------PNIVKLFEVIETEKTLYLVMEYASGGEVFDYLV--AHGRMKEKEARAKFRQI 122
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + +V Y H   ++H DLK EN+LL +                           IK+ DFG
Sbjct: 123 VSAVQYCHQKFIVHRDLKAENLLLDA------------------------DMNIKIADFG 158
Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
            S  F   N       +  Y APE+  G  +  P  D+WS+G IL  L +G   F   +N
Sbjct: 159 FSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDG-QN 217
Query: 296 LEHL 299
           L+ L
Sbjct: 218 LKEL 221

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 25  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 82  V------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEX 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
           R 
Sbjct: 230 RG 231

>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing Residues 1-317 Complex With Bound Tungstate Length = 317

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 94/238 (39%), Gaps = 44/238 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           RY++  K+G G+FG +    D    E VAIK+   ++       IE  + + +      G
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-ECVKTKHPQLHIESKIYKMMQ-----G 61
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                 IR      ++  +V E LGPSL   F+F  R     F +  V     Q++  + 
Sbjct: 62  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIE 117
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STA 241
           Y+H    IH D+KP+N L+   +                     K + + +IDFG     
Sbjct: 118 YIHSKNFIHRDVKPDNFLMGLGK---------------------KGNLVYIIDFGLAKKY 156
Query: 242 FDNQNHSSI--------VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
            D + H  I          T  Y +    LG+  S   D+ S+G +L+    G   +Q
Sbjct: 157 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 214

>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d Length = 296

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 59/238 (24%), Positives = 94/238 (39%), Gaps = 44/238 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           RY++  K+G G+FG +    D    E VAIK+   ++       IE  + + +      G
Sbjct: 10  RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL-ECVKTKHPQLHIESKIYKMMQ-----G 63
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                 IR      ++  +V E LGPSL   F+F  R     F +  V     Q++  + 
Sbjct: 64  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIE 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STA 241
           Y+H    IH D+KP+N L+   +                     K + + +IDFG     
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGK---------------------KGNLVYIIDFGLAKKY 158
Query: 242 FDNQNHSSI--------VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
            D + H  I          T  Y +    LG+  S   D+ S+G +L+    G   +Q
Sbjct: 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216

>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/244 (25%), Positives = 100/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           +++ ++G G FG V +  W+  T  +VAIK ++      ++ + E  +++ L K+DK   
Sbjct: 12  QLIKRLGNGQFGEVWMGTWNGNT--KVAIKTLKPGTMSPESFLEEAQIMKKL-KHDKLVQ 68
Query: 128 SHCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
            + V           I IV E +   SL DFLK  +     +  + +   Q+   +AY+ 
Sbjct: 69  LYAVV------SEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
            +  IH DL+  NIL V +  I                        K+ DFG       N
Sbjct: 123 RMNYIHRDLRSANIL-VGNGLI-----------------------CKIADFGLARLIEDN 158
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  
Sbjct: 159 EXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQ 218
Query: 302 MERA 305
           +ER 
Sbjct: 219 VERG 222

>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 15  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 71
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 72  V------SEEPIXIVTEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 123
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 124 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEX 159
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 160 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 219
Query: 304 RA 305
           R 
Sbjct: 220 RG 221

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 25  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 82  V------SEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
           R 
Sbjct: 230 RG 231

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 130/343 (37%), Gaps = 82/343 (23%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           +GEG   RV  C +  T +  A+K++ +     R     E+++L         G  + ++
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ-----GHRNVLE 75
Query: 133 IRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
           +  +F+  +   +VFEK+  G  L    KR  +      +V +    +  ++ ++H+  +
Sbjct: 76  LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGI 132
Query: 191 IHTDLKPENILL-----VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
            H DLKPENIL      VS   +K+  +   S  ++   C P S+   L   GS      
Sbjct: 133 AHRDLKPENILCEHPNQVSP--VKICDFDLGSGIKLNGDCSPISTPELLTPCGSA----- 185
Query: 246 NHSSIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                     Y APEV+         +   CD+WS+G IL  L +G   F          
Sbjct: 186 ---------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG-------- 228
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR-------ESIKAVKKLDRLK 353
                                    R GS   W  G           ESI+  K     K
Sbjct: 229 -------------------------RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
           +    H+  A     DL+  LL  D  +RL+A Q L HP+ + 
Sbjct: 264 DWA--HISCAAK---DLISKLLVRDAKQRLSAAQVLQHPWVQG 301

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 82/343 (23%), Positives = 130/343 (37%), Gaps = 82/343 (23%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           +GEG   RV  C +  T +  A+K++ +     R     E+++L         G  + ++
Sbjct: 21  LGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ-----GHRNVLE 75
Query: 133 IRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRL 190
           +  +F+  +   +VFEK+  G  L    KR  +      +V +    +  ++ ++H+  +
Sbjct: 76  LIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQ---DVASALDFLHNKGI 132
Query: 191 IHTDLKPENILL-----VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
            H DLKPENIL      VS   +K+  +   S  ++   C P S+   L   GS      
Sbjct: 133 AHRDLKPENILCEHPNQVSP--VKICDFGLGSGIKLNGDCSPISTPELLTPCGSA----- 185
Query: 246 NHSSIVSTRHYRAPEVILGLG-----WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                     Y APEV+         +   CD+WS+G IL  L +G   F          
Sbjct: 186 ---------EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG-------- 228
Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR-------ESIKAVKKLDRLK 353
                                    R GS   W  G           ESI+  K     K
Sbjct: 229 -------------------------RCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
           +    H+  A     DL+  LL  D  +RL+A Q L HP+ + 
Sbjct: 264 DWA--HISCAAK---DLISKLLVRDAKQRLSAAQVLQHPWVQG 301

>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 191 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 247
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 248 VSEE------PIYIVTEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 299
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 300 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 335
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 304 RA 305
           R 
Sbjct: 396 RG 397

>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 191 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 247
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 248 VSEE------PIYIVTEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 299
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 300 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 335
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 304 RA 305
           R 
Sbjct: 396 RG 397

>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 18  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 74
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 75  V------SEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 126
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 127 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 162
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 163 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 222
Query: 304 RA 305
           R 
Sbjct: 223 RG 224

>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K      V
Sbjct: 191 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEK-----LV 242
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
           Q+         I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 243 QLYAVVS-EEPIYIVGEYMSKGSLLDFLKGETGKYLRLP-QLV-DMAAQIASGMAYVERM 299
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 300 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 335
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 336 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 395
Query: 304 RA 305
           R 
Sbjct: 396 RG 397

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 14  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 70
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 71  V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 122
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 123 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 158
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 159 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 218
Query: 304 RA 305
           R 
Sbjct: 219 RG 220

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 16  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 72
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 73  V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 124
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 125 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 160
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 161 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 220
Query: 304 RA 305
           R 
Sbjct: 221 RG 222

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 25  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 82  V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
           R 
Sbjct: 230 RG 231

>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 22  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 78
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 79  V------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP-QLV-DMSAQIASGMAYVERM 130
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 131 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 166
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 167 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
Query: 304 RA 305
           R 
Sbjct: 227 RG 228

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K      V
Sbjct: 192 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGNMSPEAFLQEAQVMKKL-RHEK-----LV 243
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
           Q+         I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 244 QLYAVVS-EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 300
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 301 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLGRLIEDNEY 336
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 337 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 396
Query: 304 RA 305
           R 
Sbjct: 397 RG 398

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 70  ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
            + ++G G FG V L  W    +++VAIK +R      + AM E D ++      K    
Sbjct: 11  FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIR------EGAMSEEDFIEEAEVMMKLSHP 62
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
             VQ+      +  IC+VFE +         R +   F  + +      + E +AY+ + 
Sbjct: 63  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
            +IH DL   N L+                GE        +  IK+ DFG T F  D+Q 
Sbjct: 123 SVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 158
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
            SS  +     + +PEV     +S   D+WS G ++ E+ + G+  ++   N E
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 25  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 82  V------SEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
           R 
Sbjct: 230 RG 231

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           +G G FG V  C    T +  A+K +   R K +    + ++    L+    G     V 
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +   F   + +  + + + G  L   L  +++  F    +R +  +++  + +MH+  ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI 250
           + DLKP NIL                        L +   +++ D G +  F  +   + 
Sbjct: 315 YRDLKPANIL------------------------LDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 251 VSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+ 
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           +G G FG V  C    T +  A+K +   R K +    + ++    L+    G     V 
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 255
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +   F   + +  + + + G  L   L  +++  F    +R +  +++  + +MH+  ++
Sbjct: 256 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 313
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI 250
           + DLKP NIL                        L +   +++ D G +  F  +   + 
Sbjct: 314 YRDLKPANIL------------------------LDEHGHVRISDLGLACDFSKKKPHAS 349
Query: 251 VSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+ 
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 395

>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1 Length = 330

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 91/239 (38%), Gaps = 42/239 (17%)
Query: 66  PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
           P +++  K+G G FG +    +  T E VAIK+   ++       +E    + L   D  
Sbjct: 9   PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGSGDG- 66
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESV 182
                 Q+  +     +  +V E LGPSL   FD   R     F +  V     QL+  +
Sbjct: 67  ----IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRM 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---- 238
            Y+H   LI+ D+KPEN L      I  PG K                 I +IDFG    
Sbjct: 119 EYVHSKNLIYRDVKPENFL------IGRPGNK-------------TQQVIHIIDFGLAKE 159
Query: 239 ------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
                       + H S+  T  Y +    LG   S   D+ ++G + +    G   +Q
Sbjct: 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218

>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 22  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 78
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 79  V------SEEPIYIVTEYMNKGSLLDFLKGETGKYLRLP-QLV-DMSAQIASGMAYVERM 130
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 131 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEW 166
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 167 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 226
Query: 304 RA 305
           R 
Sbjct: 227 RG 228

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 40/182 (21%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKG 125
           YK+  ++GEG+FG + E  +    ++VAIK      +  DA  +  E    + LA     
Sbjct: 11  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP---RRSDAPQLRDEYRTYKLLAG---- 63
Query: 126 GSSHCVQIRNWFDYRN---HICIVFEKLGPSLFDFLKRNKYC--PFPVDLVREFGRQLLE 180
               C  I N + +     H  +V + LGPSL D L     C   F V  V    +Q+L 
Sbjct: 64  ----CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLD---LCGRKFSVKTVAMAAKQMLA 116
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            V  +H+  L++ D+KP+N L+         G   S +  M          I ++DFG  
Sbjct: 117 RVQSIHEKSLVYRDIKPDNFLI---------GRPNSKNANM----------IYVVDFGMV 157
Query: 241 AF 242
            F
Sbjct: 158 KF 159

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           +G G FG V  C    T +  A+K +   R K +    + ++    L+    G     V 
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +   F   + +  + + + G  L   L  +++  F    +R +  +++  + +MH+  ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI 250
           + DLKP NIL                        L +   +++ D G +  F  +   + 
Sbjct: 315 YRDLKPANIL------------------------LDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 251 VSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+ 
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 96/226 (42%), Gaps = 30/226 (13%)
Query: 74  MGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQ 132
           +G G FG V  C    T +  A+K +   R K +    + ++    L+    G     V 
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVC 256
Query: 133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLI 191
           +   F   + +  + + + G  L   L  +++  F    +R +  +++  + +MH+  ++
Sbjct: 257 MSYAFHTPDKLSFILDLMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVV 314
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSI 250
           + DLKP NIL                        L +   +++ D G +  F  +   + 
Sbjct: 315 YRDLKPANIL------------------------LDEHGHVRISDLGLACDFSKKKPHAS 350
Query: 251 VSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+ 
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT 396

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 40/182 (21%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKG 125
           YK+  ++GEG+FG + E  +    ++VAIK      +  DA  +  E    + LA     
Sbjct: 12  YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEP---RRSDAPQLRDEYRTYKLLAG---- 64
Query: 126 GSSHCVQIRNWFDYRN---HICIVFEKLGPSLFDFLKRNKYC--PFPVDLVREFGRQLLE 180
               C  I N + +     H  +V + LGPSL D L     C   F V  V    +Q+L 
Sbjct: 65  ----CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLD---LCGRKFSVKTVAMAAKQMLA 117
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            V  +H+  L++ D+KP+N L+         G   S +  M          I ++DFG  
Sbjct: 118 RVQSIHEKSLVYRDIKPDNFLI---------GRPNSKNANM----------IYVVDFGMV 158
Query: 241 AF 242
            F
Sbjct: 159 KF 160

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 101/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ + +++K    + V
Sbjct: 25  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKI-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 82  V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
           R 
Sbjct: 230 RG 231

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 68/242 (28%), Positives = 100/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 25  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGP-SLFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +   SL DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 82  V------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL   NIL+                GE        +   K+ DFG       N  
Sbjct: 134 NYVHRDLAAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
           R 
Sbjct: 230 RG 231

>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 24  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 74
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 75  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 134
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 135 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 170
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 171 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 230
Query: 302 MERA 305
           +ER 
Sbjct: 231 LERG 234

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 70  ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
            + ++G G FG V L  W    +++VAIK +R      + AM E D ++      K    
Sbjct: 14  FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIR------EGAMSEEDFIEEAEVMMKLSHP 65
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
             VQ+      +  IC+VFE +         R +   F  + +      + E +AY+ + 
Sbjct: 66  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
            +IH DL   N L+                GE        +  IK+ DFG T F  D+Q 
Sbjct: 126 CVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 161
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
            SS  +     + +PEV     +S   D+WS G ++ E+ + G+  ++   N E
Sbjct: 162 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 215

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 34/225 (15%)
Query: 69  KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKN 122
           K +  +GEG FG+V L C+D     T E VA+K ++     + R     EI++L+ L   
Sbjct: 11  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 70
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                  C + +   +    + + +  LG SL D+L R+  C     L+  F +Q+ E +
Sbjct: 71  HIVKYKGCCEDQG--EKSVQLVMEYVPLG-SLRDYLPRH--CVGLAQLLL-FAQQICEGM 124
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGST 240
           AY+H    IH  L   N+LL +   +K+  +  + +       +P+      +  D  S 
Sbjct: 125 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA-------VPEGHEYYRVREDGDSP 177
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            F             + APE +    + Y  D+WS G  L EL T
Sbjct: 178 VF-------------WYAPECLKECKFYYASDVWSFGVTLYELLT 209

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 37/257 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           +  L  +G+G+FG+V+    + T E  A+K+++     +D   +E  +++       G  
Sbjct: 22  FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD-VECTMVEKRVLALPGKP 80
Query: 128 SHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVAY 184
               Q+ + F   + +  V E +  G  ++   +  ++  P  V    E    L     +
Sbjct: 81  PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF----F 136
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
           +    +I+ DLK +N++L S                           IK+ DFG      
Sbjct: 137 LQSKGIIYRDLKLDNVMLDSE------------------------GHIKIADFGMCKENI 172
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL-A 300
           +D         T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   +
Sbjct: 173 WDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 232
Query: 301 MMERALGPLPEHMIRRA 317
           +ME  +   P+ M + A
Sbjct: 233 IMEHNVA-YPKSMSKEA 248

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 100/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 25  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGPS-LFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +    L DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 82  V------SEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
           R 
Sbjct: 230 RG 231

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 97/225 (43%), Gaps = 34/225 (15%)
Query: 69  KILSKMGEGTFGRV-LECWDRQ---TQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKN 122
           K +  +GEG FG+V L C+D     T E VA+K ++     + R     EI++L+ L   
Sbjct: 12  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHE 71
Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                  C + +   +    + + +  LG SL D+L R+  C     L+  F +Q+ E +
Sbjct: 72  HIVKYKGCCEDQG--EKSVQLVMEYVPLG-SLRDYLPRH--CVGLAQLLL-FAQQICEGM 125
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI--DFGST 240
           AY+H    IH  L   N+LL +   +K+  +  + +       +P+      +  D  S 
Sbjct: 126 AYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKA-------VPEGHEYYRVREDGDSP 178
Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            F             + APE +    + Y  D+WS G  L EL T
Sbjct: 179 VF-------------WYAPECLKECKFYYASDVWSFGVTLYELLT 210

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 37/257 (14%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           +  L  +G+G+FG+V+    + T E  A+K+++     +D   +E  +++       G  
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDD-VECTMVEKRVLALPGKP 401
Query: 128 SHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYC-PFPVDLVREFGRQLLESVAY 184
               Q+ + F   + +  V E +  G  ++   +  ++  P  V    E    L     +
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLF----F 457
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STA 241
           +    +I+ DLK +N++L S                           IK+ DFG      
Sbjct: 458 LQSKGIIYRDLKLDNVMLDSE------------------------GHIKIADFGMCKENI 493
Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL-A 300
           +D         T  Y APE+I    +    D W+ G +L E+  G+A F+  +  E   +
Sbjct: 494 WDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 553
Query: 301 MMERALGPLPEHMIRRA 317
           +ME  +   P+ M + A
Sbjct: 554 IMEHNVA-YPKSMSKEA 569

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 70  ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
            + ++G G FG V L  W    +++VAIK +R      + AM E D ++      K    
Sbjct: 11  FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIR------EGAMSEEDFIEEAEVMMKLSHP 62
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
             VQ+      +  IC+VFE +         R +   F  + +      + E +AY+ + 
Sbjct: 63  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
            +IH DL   N L+                GE        +  IK+ DFG T F  D+Q 
Sbjct: 123 CVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 158
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
            SS  +     + +PEV     +S   D+WS G ++ E+ + G+  ++   N E
Sbjct: 159 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 212

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 70  ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
            + ++G G FG V L  W    +++VAIK +R      + AM E D ++      K    
Sbjct: 9   FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIR------EGAMSEEDFIEEAEVMMKLSHP 60
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
             VQ+      +  IC+VFE +         R +   F  + +      + E +AY+ + 
Sbjct: 61  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
            +IH DL   N L+                GE        +  IK+ DFG T F  D+Q 
Sbjct: 121 CVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 156
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
            SS  +     + +PEV     +S   D+WS G ++ E+ + G+  ++   N E
Sbjct: 157 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 210

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 9/107 (8%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+ E+V ++H   L+H DLKP NI     + +K+  +   ++ +       +     L  
Sbjct: 126 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ-----DEEEQTVLTP 180
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
             + A     H+  V T+ Y +PE I G  +S+  D++S+G IL EL
Sbjct: 181 MPAYA----RHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 58/235 (24%), Positives = 102/235 (43%), Gaps = 33/235 (14%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI-EIDVLQHLAKND-- 123
           R ++   + EG F  V E  D  +    A+K + S  + ++ A+I E+  ++ L+ +   
Sbjct: 29  RLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNI 88
Query: 124 -KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKR-NKYCPFPVDLVREFGRQLLES 181
            +  S+  +        +    ++ E     L +FLK+     P   D V +   Q   +
Sbjct: 89  VQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRA 148
Query: 182 VAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           V +MH  +  +IH DLK EN+LL +   IKL  +                SA  +  +  
Sbjct: 149 VQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDF---------------GSATTISHYPD 193
Query: 240 TAFDNQNHSSIV------STRHYRAPEVILGLGWSYPC----DMWSVGCILVELC 284
            ++  Q  + +       +T  YR PE+I  L  ++P     D+W++GCIL  LC
Sbjct: 194 YSWSAQRRALVEEEITRNTTPMYRTPEII-DLYSNFPIGEKQDIWALGCILYLLC 247

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 35/160 (21%)
Query: 130 CVQIRNWFDYRNH-----ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            VQI N+ ++ +        IV E +G      LKR+K    PV     +  ++L +++Y
Sbjct: 141 IVQIFNFVEHTDRHGDPVGYIVMEYVG---GQSLKRSKGQKLPVAEAIAYLLEILPALSY 197
Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +H + L++ DLKPENI+L   +                         +KLID G+ +  N
Sbjct: 198 LHSIGLVYNDLKPENIMLTEEQ-------------------------LKLIDLGAVSRIN 232
Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
            +   +  T  ++APE++   G +   D+++VG  L  L 
Sbjct: 233 -SFGYLYGTPGFQAPEIVR-TGPTVATDIYTVGRTLAALT 270

>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 22  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 72
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 73  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 133 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 168
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 169 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 228
Query: 302 MERA 305
           +ER 
Sbjct: 229 LERG 232

>pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 26  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 76
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 77  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 136
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 137 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 172
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 173 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 232
Query: 302 MERA 305
           +ER 
Sbjct: 233 LERG 236

>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 16  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 66
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 67  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 127 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 162
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 163 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
Query: 302 MERA 305
           +ER 
Sbjct: 223 LERG 226

>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 25  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 75
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 76  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 135
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 136 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 171
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 172 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 231
Query: 302 MERA 305
           +ER 
Sbjct: 232 LERG 235

>pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 53/222 (23%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +   +  +VA+K ++       A + E ++++ L ++DK    
Sbjct: 16  KLVKRLGAGQFGEVWMGYYNNST-KVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRL 73
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           + V  R        I I+ E +   SL DFLK ++     +  + +F  Q+ E +AY+  
Sbjct: 74  YAVVTR-----EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 128
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
              IH DL+  N+L+  S                   C       K+ DFG +   ++  
Sbjct: 129 KNYIHRDLRAANVLVSES-----------------LMC-------KIADFGLARVIEDNE 164
Query: 247 HSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           +++    +    + APE I    ++   D+WS G +L E+ T
Sbjct: 165 YTAREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVT 206

>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 18  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 68
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 69  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 128
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 129 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 164
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 165 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 224
Query: 302 MERA 305
           +ER 
Sbjct: 225 LERG 228

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 102/239 (42%), Gaps = 48/239 (20%)
Query: 68  YKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVRSIRKYRDAAMIEI-----DVLQHL 119
           +++L  +G G +G+V    +     T +  A+KV++     + A   E       VL+H+
Sbjct: 56  FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHI 115
Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFL-KRNKYCPFPVDLVREFGRQ 177
            +     S   V +   F     + ++ + + G  LF  L +R ++    V +   +  +
Sbjct: 116 RQ-----SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQI---YVGE 167
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           ++ ++ ++H L +I+ D+K ENILL S                        +  + L DF
Sbjct: 168 IVLALEHLHKLGIIYRDIKLENILLDS------------------------NGHVVLTDF 203
Query: 238 GST----AFDNQNHSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALF 290
           G +    A + +       T  Y AP+++ G   G     D WS+G ++ EL TG + F
Sbjct: 204 GLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 100/242 (41%), Gaps = 44/242 (18%)
Query: 73  KMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCV 131
           K+G+G FG V +  W+  T  RVAIK ++      +A + E  V++ L +++K    + V
Sbjct: 25  KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-RHEKLVQLYAV 81
Query: 132 QIRNWFDYRNHICIVFEKLGPS-LFDFLK--RNKYCPFPVDLVREFGRQLLESVAYMHDL 188
                      I IV E +    L DFLK    KY   P  LV +   Q+   +AY+  +
Sbjct: 82  V------SEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLP-QLV-DMAAQIASGMAYVERM 133
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS 248
             +H DL+  NIL+                GE        +   K+ DFG       N  
Sbjct: 134 NYVHRDLRAANILV----------------GE--------NLVCKVADFGLARLIEDNEY 169
Query: 249 SIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMME 303
           +      +     APE  L   ++   D+WS G +L EL T G   +    N E L  +E
Sbjct: 170 TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVE 229
Query: 304 RA 305
           R 
Sbjct: 230 RG 231

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           +++ + H   +IH D+KP NIL+ ++                        +A+K++DFG 
Sbjct: 127 QALNFSHQNGIIHRDVKPANILISAT------------------------NAVKVVDFGI 162
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           + A  +  +S     +++ T  Y +PE   G       D++S+GC+L E+ TGE  F
Sbjct: 163 ARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 17  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 67
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 68  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 127
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 128 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 163
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 164 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 223
Query: 302 MERA 305
           +ER 
Sbjct: 224 LERG 227

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 93/240 (38%), Gaps = 43/240 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD----AAMIEIDVLQHLAKND 123
           +  L  +G+G+FG+V+    + T+E  AIK+++     +D      M+E  VL  L K  
Sbjct: 21  FNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDK-- 78
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL--GPSLFDFLKRNKYC-PFPVDLVREFGRQLLE 180
                   Q+ + F   + +  V E +  G  ++   +  K+  P  V    E    L  
Sbjct: 79  ---PPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF- 134
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
              ++H   +I+ DLK +N++L S                           IK+ DFG  
Sbjct: 135 ---FLHKRGIIYRDLKLDNVMLDSE------------------------GHIKIADFGMC 167
Query: 241 A---FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                D         T  Y APE+I    +    D W+ G +L E+  G+  F   +  E
Sbjct: 168 KEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE 227

>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 16  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 66
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 67  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 127 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 162
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 163 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
Query: 302 MERA 305
           +ER 
Sbjct: 223 LERG 226

>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 22  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 72
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 73  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 132
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 133 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 168
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 169 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 228
Query: 302 MERA 305
           +ER 
Sbjct: 229 LERG 232

>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 11  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 61
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 62  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 121
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 122 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 157
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 158 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 217
Query: 302 MERA 305
           +ER 
Sbjct: 218 LERG 221

>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 21  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 71
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 72  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 131
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 132 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 167
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 168 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 227
Query: 302 MERA 305
           +ER 
Sbjct: 228 LERG 231

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 81/353 (22%), Positives = 137/353 (38%), Gaps = 79/353 (22%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI----EIDVLQHLAKND 123
           ++IL  +G G F  V     +QT +  A+K++      +   +     E DVL +     
Sbjct: 63  FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN----- 117
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            G      Q+   F   N++ +V E  +G  L   L +      P ++ R +  +++ ++
Sbjct: 118 -GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGE-RIPAEMARFYLAEIVMAI 175
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA- 241
             +H L  +H D+KP+NILL                     RC      I+L DFGS   
Sbjct: 176 DSVHRLGYVHRDIKPDNILLD--------------------RC----GHIRLADFGSCLK 211
Query: 242 --FDNQNHSSI-VSTRHYRAPEVILGLGWSY-------PCDMWSVGCILVELCTGEALF- 290
              D    S + V T  Y +PE++  +G           CD W++G    E+  G+  F 
Sbjct: 212 LRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFY 271
Query: 291 -----QTHENL----EHLAM--------------MERALGPLPEHMIRRASRG---TEKY 324
                +T+  +    EHL++              ++R L P PE  + R   G   T  +
Sbjct: 272 ADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLGRGGAGDFRTHPF 330
Query: 325 FR----RGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG 373
           F      G R + P      E        D +++ ++  V     TL+D+  G
Sbjct: 331 FFGLDWDGLRDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGGGETLSDIREG 383

>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 16  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 66
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 67  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH DL+  NIL+  +                   C       K+ DFG       N
Sbjct: 127 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 162
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 163 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
Query: 302 MERA 305
           +ER 
Sbjct: 223 LERG 226

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+ E+V ++H   L+H DLKP NI     + +K+  +   ++ +       +     L  
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQ-----DEEEQTVLTP 226
Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
             + A     H   V T+ Y +PE I G  +S+  D++S+G IL EL
Sbjct: 227 MPAYA----THXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 31/137 (22%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           +++ + H   +IH D+KP NI++ ++                        +A+K++DFG 
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISAT------------------------NAVKVMDFGI 162
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
           + A  +  +S     +++ T  Y +PE   G       D++S+GC+L E+ TGE  F T 
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF-TG 221
Query: 294 ENLEHLAMMERALGPLP 310
           ++ + +A       P+P
Sbjct: 222 DSPDSVAYQHVREDPIP 238

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 48.9 bits (115), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 60/250 (24%)
Query: 64  LTPRYKILSKMGEGTFGRVLECWDRQTQERVAI-------------------KVVRSIRK 104
           L  +Y +   +GEG++G+V E  D +T  R A+                   K ++ +R+
Sbjct: 3   LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRR 62
Query: 105 YRDAAMIE-IDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKY 163
            R   +I+ +DVL +  K            + +      +C + E     + D +   + 
Sbjct: 63  LRHKNVIQLVDVLYNEEKQ-----------KMYMVMEYCVCGMQE-----MLDSVPEKR- 105
Query: 164 CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
             FPV     +  QL++ + Y+H   ++H D+KP N+LL             ++ G +  
Sbjct: 106 --FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL-------------TTGGTLKI 150
Query: 224 RCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW--SYPCDMWSVGCILV 281
             L  + A+       T   +Q   +      ++ PE+  GL     +  D+WS G  L 
Sbjct: 151 SALGVAEALHPFAADDTCRTSQGSPA------FQPPEIANGLDTFSGFKVDIWSAGVTLY 204
Query: 282 ELCTGEALFQ 291
            + TG   F+
Sbjct: 205 NITTGLYPFE 214

>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With Inhibitor Length = 330

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 90/239 (37%), Gaps = 42/239 (17%)
Query: 66  PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
           P +++  K+G G FG +    +  T E VAIK+   ++       +E    + L   D  
Sbjct: 9   PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGSGDG- 66
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESV 182
                 Q+  +     +  +V E LGPSL   FD   R     F +  V     QL+  +
Sbjct: 67  ----IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRM 118
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---- 238
            Y+H   LI+ D+KPEN L      I  PG K                 I +IDF     
Sbjct: 119 EYVHSKNLIYRDVKPENFL------IGRPGNK-------------TQQVIHIIDFALAKE 159
Query: 239 ------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
                       + H S+  T  Y +    LG   S   D+ ++G + +    G   +Q
Sbjct: 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 218

>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3 Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 59/239 (24%), Positives = 90/239 (37%), Gaps = 42/239 (17%)
Query: 66  PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
           P +++  K+G G FG +    +  T E VAIK+   ++       +E    + L   D  
Sbjct: 30  PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPMKSRAPQLHLEYRFYKQLGSGDG- 87
Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESV 182
                 Q+  +     +  +V E LGPSL   FD   R     F +  V     QL+  +
Sbjct: 88  ----IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCDRT----FSLKTVLMIAIQLISRM 139
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---- 238
            Y+H   LI+ D+KPEN L      I  PG K                 I +IDF     
Sbjct: 140 EYVHSKNLIYRDVKPENFL------IGRPGNK-------------TQQVIHIIDFALAKE 180
Query: 239 ------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
                       + H S+  T  Y +    LG   S   D+ ++G + +    G   +Q
Sbjct: 181 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 239

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 90/236 (38%), Gaps = 41/236 (17%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           ++  K+G G FG +    +  T E VAIK+   I+       +E    + L    +G   
Sbjct: 3   RVGKKIGCGNFGELRLGKNLYTNEYVAIKL-EPIKSRAPQLHLEYRFYKQLGSAGEG--- 58
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
              Q+  +     +  +V E LGPSL   FD   R     F +  V     QLL  + Y+
Sbjct: 59  -LPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCDRT----FTLKTVLMIAIQLLSRMEYV 113
Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG------- 238
           H   LI+ D+KPEN L      I   G K             K   I +IDFG       
Sbjct: 114 HSKNLIYRDVKPENFL------IGRQGNK-------------KEHVIHIIDFGLAKEYID 154
Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
                    + H S+  T  Y +    LG   S   D+ ++G + +    G   +Q
Sbjct: 155 PETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQ 210

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           +++ + H   +IH D+KP NI++ ++                        +A+K++DFG 
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISAT------------------------NAVKVMDFGI 162
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           + A  +  +S     +++ T  Y +PE   G       D++S+GC+L E+ TGE  F
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           +++ + H   +IH D+KP NI++ ++                        +A+K++DFG 
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISAT------------------------NAVKVMDFGI 162
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           + A  +  +S     +++ T  Y +PE   G       D++S+GC+L E+ TGE  F
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           +++ + H   +IH D+KP NI++ ++                        +A+K++DFG 
Sbjct: 127 QALNFSHQNGIIHRDVKPANIMISAT------------------------NAVKVMDFGI 162
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           + A  +  +S     +++ T  Y +PE   G       D++S+GC+L E+ TGE  F
Sbjct: 163 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 219

>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267

Iteration: 1
 Score = 48.5 bits (114), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 98/244 (40%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G FG V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 12  KLVERLGAGQFGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 62
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 63  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 122
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +   IH +L+  NIL+  +                   C       K+ DFG       N
Sbjct: 123 ERNYIHRNLRAANILVSDT-----------------LSC-------KIADFGLARLIEDN 158
Query: 247 HSSIVSTRHY----RAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             +      +     APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 159 EYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 218
Query: 302 MERA 305
           +ER 
Sbjct: 219 LERG 222

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 98/234 (41%), Gaps = 38/234 (16%)
Query: 70  ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
            + ++G G FG V L  W    +++VAIK ++      D  + E +V+  L+        
Sbjct: 31  FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSH------P 82
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
             VQ+      +  IC+VFE +         R +   F  + +      + E +AY+ + 
Sbjct: 83  KLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
            +IH DL   N L+                GE        +  IK+ DFG T F  D+Q 
Sbjct: 143 CVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 178
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
            SS  +     + +PEV     +S   D+WS G ++ E+ + G+  ++   N E
Sbjct: 179 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 232

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 30/117 (25%)
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           +++ + H   +IH D+KP NI++ ++                        +A+K++DFG 
Sbjct: 144 QALNFSHQNGIIHRDVKPANIMISAT------------------------NAVKVMDFGI 179
Query: 239 STAFDNQNHS-----SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           + A  +  +S     +++ T  Y +PE   G       D++S+GC+L E+ TGE  F
Sbjct: 180 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPF 236

>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 52/222 (23%), Positives = 98/222 (44%), Gaps = 36/222 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ K+G G FG V   +   +  +VA+K ++       A + E ++++ L ++DK    
Sbjct: 15  KLVKKLGAGQFGEVWMGYYNNST-KVAVKTLKPGTMSVQAFLEEANLMKTL-QHDKLVRL 72
Query: 129 HCVQIRNWFDYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           + V  +        I I+ E +   SL DFLK ++     +  + +F  Q+ E +AY+  
Sbjct: 73  YAVVTK-----EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQN 246
              IH DL+  N+L+  S                   C       K+ DFG +   ++  
Sbjct: 128 KNYIHRDLRAANVLVSES-----------------LMC-------KIADFGLARVIEDNE 163
Query: 247 HSSIVSTRH---YRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           +++    +    + APE I    ++   ++WS G +L E+ T
Sbjct: 164 YTAREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVT 205

>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567 Length = 296

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 94/238 (39%), Gaps = 44/238 (18%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           +Y++  K+G G+FG +    +  + E VAIK+   ++       IE    + +      G
Sbjct: 10  KYRLGRKIGSGSFGDIYLGANIASGEEVAIKL-ECVKTKHPQLHIESKFYKMMQ-----G 63
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSL---FDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                 I+      ++  +V E LGPSL   F+F  R     F +  V     Q++  + 
Sbjct: 64  GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK----FSLKTVLLLADQMISRIE 119
Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STA 241
           Y+H    IH D+KP+N L+   +                     K + + +IDFG     
Sbjct: 120 YIHSKNFIHRDVKPDNFLMGLGK---------------------KGNLVYIIDFGLAKKY 158
Query: 242 FDNQNHSSI--------VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
            D + H  I          T  Y +    LG+  S   D+ S+G +L+    G   +Q
Sbjct: 159 RDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 26/116 (22%)
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
           L  E   Q+ + V Y+H  +LIH DLKP NI LV ++                       
Sbjct: 137 LALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTK----------------------- 173
Query: 230 SAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
             +K+ DFG  ++  ++   +    T  Y +PE I    +    D++++G IL EL
Sbjct: 174 -QVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 47.4 bits (111), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 38/234 (16%)
Query: 70  ILSKMGEGTFGRV-LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
            + ++G G FG V L  W    +++VAIK +R      + AM E D ++      K    
Sbjct: 12  FVQEIGSGQFGLVHLGYW--LNKDKVAIKTIR------EGAMSEEDFIEEAEVMMKLSHP 63
Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
             VQ+      +  IC+V E +         R +   F  + +      + E +AY+ + 
Sbjct: 64  KLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
            +IH DL   N L+                GE        +  IK+ DFG T F  D+Q 
Sbjct: 124 CVIHRDLAARNCLV----------------GE--------NQVIKVSDFGMTRFVLDDQY 159
Query: 247 HSSIVST--RHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE 297
            SS  +     + +PEV     +S   D+WS G ++ E+ + G+  ++   N E
Sbjct: 160 TSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSE 213

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/254 (21%), Positives = 111/254 (43%), Gaps = 45/254 (17%)
Query: 44  SPPRRDDDRE----GHYVFNL-GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKV 98
           +PPR  D +     G+  F +  ++L P    + ++G G +G V +     + + +A+K 
Sbjct: 28  TPPRDLDSKACISIGNQNFEVKADDLEP----IMELGRGAYGVVEKMRHVPSGQIMAVKR 83
Query: 99  VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL 158
           +R+    ++   + +D+   +   D       V           + I  E +  SL  F 
Sbjct: 84  IRATVNSQEQKRLLMDLDISMRTVD---CPFTVTFYGALFREGDVWICMELMDTSLDKFY 140
Query: 159 KR--NKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKR 215
           K+  +K    P D++ +    +++++ ++H  L +IH D+KP N+L+             
Sbjct: 141 KQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI------------- 187
Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVI----LGLGWSY 269
           ++ G+           +K+ DFG + +  D+   +     + Y APE I       G+S 
Sbjct: 188 NALGQ-----------VKMCDFGISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYSV 236
Query: 270 PCDMWSVGCILVEL 283
             D+WS+G  ++EL
Sbjct: 237 KSDIWSLGITMIEL 250

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/240 (22%), Positives = 96/240 (40%), Gaps = 42/240 (17%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR---DAAMIEIDVLQHLAKNDK 124
           ++ LS++G G++G V +   ++     A+K  RS+  +R   D A    +V  H      
Sbjct: 59  FQRLSRLGHGSYGEVFKVRSKEDGRLYAVK--RSMSPFRGPKDRARKLAEVGSH---EKV 113
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYC-----PFPVDLVREFGRQLL 179
           G    CV++   ++    + +  E  GPSL       ++C       P   V  + R  L
Sbjct: 114 GQHPCCVRLEQAWEEGGILYLQTELCGPSL------QQHCEAWGASLPEAQVWGYLRDTL 167
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++A++H   L+H D+KP NI L      KL  +                    L++ G+
Sbjct: 168 LALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL------------------LVELGT 209
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
                           Y APE++ G  +    D++S+G  ++E+     L    E  + L
Sbjct: 210 AGAGEVQEGD----PRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL 264

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 27/98 (27%)
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS- 248
           ++H DLKP N+ L   + +KL                         DFG     N + S 
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLG------------------------DFGLARILNHDTSF 172
Query: 249 --SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
             + V T +Y +PE +  + ++   D+WS+GC+L ELC
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 27/98 (27%)
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS- 248
           ++H DLKP N+ L   + +KL                         DFG     N + S 
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLG------------------------DFGLARILNHDTSF 172
Query: 249 --SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
             + V T +Y +PE +  + ++   D+WS+GC+L ELC
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210

>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
           ++L K+G+G+FG V    WD  + + V++ V      V S  +  D  + E++ +  L  
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 78
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
                  H   IR +         +  +L P  SL D L++++   F +  +  +  Q+ 
Sbjct: 79  ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 131
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           E + Y+   R IH DL   N+LL + + +K+  +     G M  R LP++    ++    
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQNDDHXVM---- 180
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
                Q H  +     + APE +    +S+  D W  G  L E+ T
Sbjct: 181 -----QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
           ++L K+G+G+FG V    WD  + + V++ V      V S  +  D  + E++ +  L  
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 78
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
                  H   IR +         +  +L P  SL D L++++   F +  +  +  Q+ 
Sbjct: 79  ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 131
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           E + Y+   R IH DL   N+LL + + +K+  +     G M  R LP++    ++    
Sbjct: 132 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQNDDHYVM---- 180
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
                Q H  +     + APE +    +S+  D W  G  L E+ T
Sbjct: 181 -----QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 219

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 93/224 (41%), Gaps = 39/224 (17%)
Query: 72  SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVL-------QHLAKNDK 124
           +KMGEG FG V + +   T   VA+K        + AAM++I          Q +    K
Sbjct: 37  NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK-RNKYCPFPVDLVREFGRQLLESV 182
               + V++  +    + +C+V+  +   SL D L   +   P    +  +  +     +
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++H+   IH D+K  NILL  +   K+  +  + + E                F  T  
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE---------------KFAQTVM 191
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
                S IV T  Y APE + G   +   D++S G +L+E+ TG
Sbjct: 192 ----XSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
           ++L K+G+G+FG V    WD  + + V++ V      V S  +  D  + E++ +  L  
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
                  H   IR +         +  +L P  SL D L++++   F +  +  +  Q+ 
Sbjct: 69  ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 121
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           E + Y+   R IH DL   N+LL + + +K+  +     G M  R LP++    ++    
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQNDDHXVM---- 170
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
                Q H  +     + APE +    +S+  D W  G  L E+ T
Sbjct: 171 -----QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300

Iteration: 1
 Score = 45.8 bits (107), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 18  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 77
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 78  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 129
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 130 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 183 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 217

>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
           ++L K+G+G+FG V    WD  + + V++ V      V S  +  D  + E++ +  L  
Sbjct: 15  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 72
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
                  H   IR +         +  +L P  SL D L++++   F +  +  +  Q+ 
Sbjct: 73  ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           E + Y+   R IH DL   N+LL + + +K+  +     G M  R LP++          
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQN---------D 169
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
             +  Q H  +     + APE +    +S+  D W  G  L E+ T
Sbjct: 170 DHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 98/226 (43%), Gaps = 36/226 (15%)
Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
           ++L K+G+G+FG V    WD  + + V++ V      V S  +  D  + E++ +  L  
Sbjct: 15  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 72
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
                  H   IR +         +  +L P  SL D L++++   F +  +  +  Q+ 
Sbjct: 73  ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           E + Y+   R IH DL   N+LL + + +K+  +     G M  R LP++    ++    
Sbjct: 126 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQNDDHYVM---- 174
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
                Q H  +     + APE +    +S+  D W  G  L E+ T
Sbjct: 175 -----QEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 213

>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 76  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 127
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 180
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 181 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 20  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 79
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 80  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 131
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 132 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 184
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 185 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 219

>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 73  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 124
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA-IKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEFFKVKEPG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 178 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 19  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 78
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 79  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 130
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 131 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 183
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 184 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 218

>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 103
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 104 IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 155
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 156 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 208
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 209 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 91  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS-AIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 195
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 196 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 31  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 90
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 91  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 142
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS-AIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 143 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 195
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 196 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 230

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 57/255 (22%), Positives = 99/255 (38%), Gaps = 59/255 (23%)
Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEI------------- 113
           +Y +  ++G+G++G V   ++       A+KV+   +  R A                  
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 114 --------DVLQHLAKNDKGGSSHCVQIRNWFDYRN--HICIVFEKL--GPSLFDFLKRN 161
                    V Q +A   K    + V++    D  N  H+ +VFE +  GP     ++  
Sbjct: 74  IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGP----VMEVP 129
Query: 162 KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM 221
              P   D  R + + L++ + Y+H  ++IH D+KP N+L+                GE 
Sbjct: 130 TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV----------------GE- 172
Query: 222 PFRCLPKSSAIKLIDFG-STAFDNQNH--SSIVSTRHYRAPEVIL---GLGWSYPCDMWS 275
                     IK+ DFG S  F   +   S+ V T  + APE +     +      D+W+
Sbjct: 173 -------DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWA 225
Query: 276 VGCILVELCTGEALF 290
           +G  L     G+  F
Sbjct: 226 MGVTLYCFVFGQCPF 240

>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 12  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 71
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 72  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 123
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS-AIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 124 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 176
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 177 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 211

>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
           ++L K+G+G+FG V    WD  + + V++ V      V S  +  D  + E++ +  L  
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
                  H   IR +         +  +L P  SL D L++++   F +  +  +  Q+ 
Sbjct: 69  ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 121
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           E + Y+   R IH DL   N+LL + + +K+  +     G M  R LP++          
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQN---------D 165
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
             +  Q H  +     + APE +    +S+  D W  G  L E+ T
Sbjct: 166 DHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 73  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 124
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS-AIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 178 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 97/226 (42%), Gaps = 36/226 (15%)
Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKV------VRSIRKYRDAAMIEIDVLQHLAK 121
           ++L K+G+G+FG V    WD  + + V++ V      V S  +  D  + E++ +  L  
Sbjct: 11  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL-- 68
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGP--SLFDFLKRNKYCPFPVDLVREFGRQLL 179
                  H   IR +         +  +L P  SL D L++++   F +  +  +  Q+ 
Sbjct: 69  ------DHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVA 121
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           E + Y+   R IH DL   N+LL + + +K+  +     G M  R LP++          
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDLVKIGDF-----GLM--RALPQN---------D 165
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
             +  Q H  +     + APE +    +S+  D W  G  L E+ T
Sbjct: 166 DHYVMQEHRKVPFA--WCAPESLKTRTFSHASDTWMFGVTLWEMFT 209

>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 17  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 76
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 77  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 128
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 129 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 181
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 182 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 216

>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 73  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 124
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 125 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 177
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 178 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And Inactive Conformations Suggests A Mechanism Of Activation For Tec Family Kinases Length = 283

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
            L ++G G FG V++    + Q  VAIK+++      D  + E  V+ +L+         
Sbjct: 28  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 80
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            VQ+      +  I I+ E +    L ++L+  ++  F    + E  + + E++ Y+   
Sbjct: 81  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 139
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
           + +H DL   N L+                             +K+ DFG + +  D++ 
Sbjct: 140 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEE 175
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
            SS+ S    R   PEV++   +S   D+W+ G ++ E+ +   +    F   E  EH+A
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
Query: 301 MMERALGP 308
              R   P
Sbjct: 236 QGLRLYRP 243

>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase Domain Of Csf-1r Length = 324

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 55/240 (22%), Positives = 98/240 (40%), Gaps = 55/240 (22%)
Query: 74  MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDK-- 124
           +G G FG+V+E             +VA+K+++S      ++A M E+ ++ HL +++   
Sbjct: 39  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 125 ---GGSSH---CVQIRNWFDYRNHICIVFEK----LGPSLF-----DFLKRNKYCPFPVD 169
              G  +H    + I  +  Y + +  +  K    LGPSL      + L +    P  + 
Sbjct: 99  NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
            +  F  Q+ + +A++     IH D+   N+LL +    K+                   
Sbjct: 159 DLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG------------------ 200
Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
                 DFG  A D  N S+ +   + R      APE I    ++   D+WS G +L E+
Sbjct: 201 ------DFG-LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 253

>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 56/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 11  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 70
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 71  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 122
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS-AIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 123 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 175
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 176 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 210

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEIDV 115
           +GE+    +++L   G G FG V  C  + T +  A K +   R  +      AM+E  +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-----LFDFLKRNKYCPFPVDL 170
           L  +       S   V +   F+ +  +C+V   +        +++  + N     P  +
Sbjct: 239 LAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
              +  Q++  + ++H   +I+ DLKPEN+LL                G +    L  + 
Sbjct: 293 F--YTAQIVSGLEHLHQRNIIYRDLKPENVLL-------------DDDGNVRISDLGLAV 337
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
            +K    G T            T  + APE++LG  + +  D +++G  L E+      F
Sbjct: 338 ELKA---GQT-----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
Query: 291 QTH-ENLEHLAMMERAL 306
           +   E +E+  + +R L
Sbjct: 390 RARGEKVENKELKQRVL 406

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 27/98 (27%)
Query: 190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS- 248
           ++H DLKP N+ L   + +KL                         DFG     N +   
Sbjct: 137 VLHRDLKPANVFLDGKQNVKLG------------------------DFGLARILNHDEDF 172
Query: 249 --SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
               V T +Y +PE +  + ++   D+WS+GC+L ELC
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEIDV 115
           +GE+    +++L   G G FG V  C  + T +  A K +   R  +      AM+E  +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-----LFDFLKRNKYCPFPVDL 170
           L  +       S   V +   F+ +  +C+V   +        +++  + N     P  +
Sbjct: 239 LAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
              +  Q++  + ++H   +I+ DLKPEN+LL                G +    L  + 
Sbjct: 293 F--YTAQIVSGLEHLHQRNIIYRDLKPENVLL-------------DDDGNVRISDLGLAV 337
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
            +K    G T            T  + APE++LG  + +  D +++G  L E+      F
Sbjct: 338 ELKA---GQT-----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
Query: 291 QTH-ENLEHLAMMERAL 306
           +   E +E+  + +R L
Sbjct: 390 RARGEKVENKELKQRVL 406

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEIDV 115
           +GE+    +++L   G G FG V  C  + T +  A K +   R  +      AM+E  +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-----LFDFLKRNKYCPFPVDL 170
           L  +       S   V +   F+ +  +C+V   +        +++  + N     P  +
Sbjct: 239 LAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
              +  Q++  + ++H   +I+ DLKPEN+LL                G +    L  + 
Sbjct: 293 F--YTAQIVSGLEHLHQRNIIYRDLKPENVLL-------------DDDGNVRISDLGLAV 337
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
            +K    G T            T  + APE++LG  + +  D +++G  L E+      F
Sbjct: 338 ELKA---GQT-----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
Query: 291 QTH-ENLEHLAMMERAL 306
           +   E +E+  + +R L
Sbjct: 390 RARGEKVENKELKQRVL 406

>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 60/248 (24%), Positives = 100/248 (40%), Gaps = 65/248 (26%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R K+   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 30  RLKLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF-PVDL 170
                    H + + N             + + F K G +L  +L  KRN++ P+ P DL
Sbjct: 90  G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKPEDL 140
Query: 171 VREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM 221
            ++F           Q+ + + ++   + IH DL   NILL                   
Sbjct: 141 YKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILL------------------- 181
Query: 222 PFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWS 275
                 + + +K+ DFG  A D       V     R      APE I    ++   D+WS
Sbjct: 182 -----SEKNVVKICDFG-LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 235
Query: 276 VGCILVEL 283
            G +L E+
Sbjct: 236 FGVLLWEI 243

>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 101/244 (41%), Gaps = 40/244 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K++ ++G G  G V   +      +VA+K ++      DA + E ++++ L         
Sbjct: 16  KLVERLGAGQAGEVWMGY-YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQL--------Q 66
Query: 129 HCVQIRNW-FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           H   +R +    +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++ 
Sbjct: 67  HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQ 245
           +   IH DL+  NIL+  +                   C       K+ DFG +   ++ 
Sbjct: 127 ERNYIHRDLRAANILVSDT-----------------LSC-------KIADFGLARLIEDA 162
Query: 246 NHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM 301
             ++    +    + APE I    ++   D+WS G +L E+ T G   +    N E +  
Sbjct: 163 EXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQN 222
Query: 302 MERA 305
           +ER 
Sbjct: 223 LERG 226

>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine Kinase Bound To A Pyrrolopyrimidine-Containing Compound Length = 283

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
            L ++G G FG V++    + Q  VAIK+++      D  + E  V+ +L+         
Sbjct: 28  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 80
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            VQ+      +  I I+ E +    L ++L+  ++  F    + E  + + E++ Y+   
Sbjct: 81  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 139
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
           + +H DL   N L+                             +K+ DFG + +  D++ 
Sbjct: 140 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 175
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
            SS+ S    R   PEV++   +S   D+W+ G ++ E+ +   +    F   E  EH+A
Sbjct: 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
Query: 301 MMERALGP 308
              R   P
Sbjct: 236 QGLRLYRP 243

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 50/116 (43%), Gaps = 26/116 (22%)
Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
           L  E   Q+ + V Y+H  +LI+ DLKP NI LV ++                       
Sbjct: 123 LALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK----------------------- 159
Query: 230 SAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
             +K+ DFG  ++  ++        T  Y +PE I    +    D++++G IL EL
Sbjct: 160 -QVKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214

>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 65  TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKND 123
           T  +  L K+G G FG V +C  R      AIK  RS +K    ++ E + L+ + A   
Sbjct: 10  TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 66
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLE 180
            G  SH V+  + +   +H+ I  E   G SL D +  N      F    +++   Q+  
Sbjct: 67  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 181 SVAYMHDLRLIHTDLKPENILL 202
            + Y+H + L+H D+KP NI +
Sbjct: 127 GLRYIHSMSLVHMDIKPSNIFI 148

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 54/224 (24%), Positives = 93/224 (41%), Gaps = 39/224 (17%)
Query: 72  SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVL-------QHLAKNDK 124
           +KMGEG FG V + +   T   VA+K        + AAM++I          Q +    K
Sbjct: 37  NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 86
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK-RNKYCPFPVDLVREFGRQLLESV 182
               + V++  +    + +C+V+  +   SL D L   +   P    +  +  +     +
Sbjct: 87  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 146
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++H+   IH D+K  NILL  +   K+  +  + + E                F  T  
Sbjct: 147 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE---------------KFAQTVM 191
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
             +    IV T  Y APE + G   +   D++S G +L+E+ TG
Sbjct: 192 XXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 230

>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 79/256 (30%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R K+   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 65  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 124
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
                    H + + N             + + F K G +L  +L  KRN++ P+   P 
Sbjct: 125 G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPE 175
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------- 210
           DL ++F           Q+ + + ++   + IH DL   NILL     +K+         
Sbjct: 176 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
Query: 211 ---PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW 267
              P Y R     +P +                               + APE I    +
Sbjct: 236 YKDPDYVRKGDARLPLK-------------------------------WMAPETIFDRVY 264
Query: 268 SYPCDMWSVGCILVEL 283
           +   D+WS G +L E+
Sbjct: 265 TIQSDVWSFGVLLWEI 280

>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 65  TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKND 123
           T  +  L K+G G FG V +C  R      AIK  RS +K    ++ E + L+ + A   
Sbjct: 8   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 64
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLE 180
            G  SH V+  + +   +H+ I  E   G SL D +  N      F    +++   Q+  
Sbjct: 65  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 181 SVAYMHDLRLIHTDLKPENILL 202
            + Y+H + L+H D+KP NI +
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFI 146

>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 65  TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKND 123
           T  +  L K+G G FG V +C  R       I  ++  +K    ++ E + L+ + A   
Sbjct: 8   TTEFHELEKIGSGEFGSVFKCVKRLDG---CIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLE 180
            G  SH V+  + +   +H+ I  E   G SL D +  N      F    +++   Q+  
Sbjct: 65  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 181 SVAYMHDLRLIHTDLKPENILL 202
            + Y+H + L+H D+KP NI +
Sbjct: 125 GLRYIHSMSLVHMDIKPSNIFI 146

>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 65  TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-AKND 123
           T  +  L K+G G FG V +C  R      AIK  RS +K    ++ E + L+ + A   
Sbjct: 6   TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIK--RS-KKPLAGSVDEQNALREVYAHAV 62
Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLE 180
            G  SH V+  + +   +H+ I  E   G SL D +  N      F    +++   Q+  
Sbjct: 63  LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 181 SVAYMHDLRLIHTDLKPENILL 202
            + Y+H + L+H D+KP NI +
Sbjct: 123 GLRYIHSMSLVHMDIKPSNIFI 144

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/257 (21%), Positives = 104/257 (40%), Gaps = 42/257 (16%)
Query: 60  LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR----DAAMIEIDV 115
           +GE+    +++L   G G FG V  C  + T +  A K +   R  +      AM+E  +
Sbjct: 182 MGEDWFLDFRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKI 238
Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-----LFDFLKRNKYCPFPVDL 170
           L  +       S   V +   F+ +  +C+V   +        +++  + N     P  +
Sbjct: 239 LAKVH------SRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAI 292
Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
              +  Q++  + ++H   +I+ DLKPEN+LL                G +    L  + 
Sbjct: 293 F--YTAQIVSGLEHLHQRNIIYRDLKPENVLL-------------DDDGNVRISDLGLAV 337
Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
            +K    G T            T  + APE++LG  + +  D +++G  L E+      F
Sbjct: 338 ELKA---GQT-----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
Query: 291 QTH-ENLEHLAMMERAL 306
           +   E +E+  + +R L
Sbjct: 390 RARGEKVENKELKQRVL 406

>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With 2-Isopropyl-7- (4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3- Ylamino)-2h- Phthalazin-1-One Length = 274

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
            L ++G G FG V++    + Q  VAIK+++      D  + E  V+ +L+         
Sbjct: 19  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 71
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            VQ+      +  I I+ E +    L ++L+  ++  F    + E  + + E++ Y+   
Sbjct: 72  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 130
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
           + +H DL   N L+                             +K+ DFG + +  D++ 
Sbjct: 131 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 166
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
            SS+ S    R   PEV++   +S   D+W+ G ++ E+ +   +    F   E  EH+A
Sbjct: 167 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 226
Query: 301 MMERALGP 308
              R   P
Sbjct: 227 QGLRLYRP 234

>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 79/256 (30%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R K+   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 30  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 89
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
                    H + + N             + + F K G +L  +L  KRN++ P+   P 
Sbjct: 90  G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKEAPE 140
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------- 210
           DL ++F           Q+ + + ++   + IH DL   NILL     +K+         
Sbjct: 141 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
Query: 211 ---PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW 267
              P Y R     +P +                               + APE I    +
Sbjct: 201 YKDPDYVRKGDARLPLK-------------------------------WMAPETIFDRVY 229
Query: 268 SYPCDMWSVGCILVEL 283
           +   D+WS G +L E+
Sbjct: 230 TIQSDVWSFGVLLWEI 245

>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K+L  +G+G FG V+    R    +VA+K +++      A + E  V+  L        S
Sbjct: 15  KLLQTIGKGEFGDVMLGDYRGN--KVAVKCIKN-DATAQAFLAEASVMTQLRH------S 65
Query: 129 HCVQIRNWF-DYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           + VQ+     + +  + IV E +   SL D+L+         D + +F   + E++ Y+ 
Sbjct: 66  NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 125
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
               +H DL   N+L+                         + +  K+ DFG T   +  
Sbjct: 126 GNNFVHRDLAARNVLV------------------------SEDNVAKVSDFGLTKEASST 161
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
             +      + APE +    +S   D+WS G +L E+
Sbjct: 162 QDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEI 198

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 20/100 (20%)
Query: 192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIV 251
           H D+KPENIL+ + +F  L  +  +S+          ++  KL   G+T          V
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASA----------TTDEKLTQLGNT----------V 196
Query: 252 STRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
            T +Y APE       +Y  D++++ C+L E  TG   +Q
Sbjct: 197 GTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQ 236

>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain Length = 263

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
            L ++G G FG V++    + Q  VAIK+++      D  + E  V+ +L+         
Sbjct: 8   FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 60
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            VQ+      +  I I+ E +    L ++L+  ++  F    + E  + + E++ Y+   
Sbjct: 61  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 119
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
           + +H DL   N L+                             +K+ DFG + +  D++ 
Sbjct: 120 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 155
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
            SS+ S    R   PEV++   +S   D+W+ G ++ E+ +   +    F   E  EH+A
Sbjct: 156 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 215
Query: 301 MMERALGP 308
              R   P
Sbjct: 216 QGLRLYRP 223

>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 69  KILSKMGEGTFGRVLEC-WDRQ---TQERVAIKVVRSIRKYRDAAMI--EIDVLQHLA-K 121
           K +  +GEG FG+V  C +D +   T E+VA+K ++        A +  EI++L++L  +
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 83
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE--FGRQL 178
           N       C +     D  N I ++ E L   SL ++L +NK     ++L ++  +  Q+
Sbjct: 84  NIVKYKGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQI 135
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
            + + Y+   + +H DL   N+L+ S   +K+  +               + AI+     
Sbjct: 136 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL-------------TKAIETDKEX 182
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            T  D+++     S   + APE ++   +    D+WS G  L EL T         +   
Sbjct: 183 XTVKDDRD-----SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSP 232
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWP 334
           +A+  + +GP    M       T    + G RL  P
Sbjct: 233 MALFLKMIGPTHGQMTVTRLVNT---LKEGKRLPCP 265

>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex With Inhibitor Cgi1746 Length = 271

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
            L ++G G FG V++    + Q  VAIK+++      D  + E  V+ +L+         
Sbjct: 13  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 65
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            VQ+      +  I I+ E +    L ++L+  ++  F    + E  + + E++ Y+   
Sbjct: 66  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 124
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
           + +H DL   N L+                             +K+ DFG + +  D++ 
Sbjct: 125 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 160
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
            SS+ S    R   PEV++   +S   D+W+ G ++ E+ +   +    F   E  EH+A
Sbjct: 161 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
Query: 301 MMERALGP 308
              R   P
Sbjct: 221 QGLRLYRP 228

>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 98/256 (38%), Gaps = 79/256 (30%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R K+   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
                    H + + N             + + F K G +L  +L  KRN++ P+   P 
Sbjct: 88  G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPE 138
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------- 210
           DL ++F           Q+ + + ++   + IH DL   NILL     +K+         
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
Query: 211 ---PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW 267
              P Y R     +P +                               + APE I    +
Sbjct: 199 YKDPDYVRKGDARLPLK-------------------------------WMAPETIFDRVY 227
Query: 268 SYPCDMWSVGCILVEL 283
           +   D+WS G +L E+
Sbjct: 228 TIQSDVWSFGVLLWEI 243

>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain Length = 267

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 103/248 (41%), Gaps = 41/248 (16%)
Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
            L ++G G FG V++    + Q  VAIK+++      D  + E  V+ +L+         
Sbjct: 12  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 64
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            VQ+      +  I I+ E +    L ++L+  ++  F    + E  + + E++ Y+   
Sbjct: 65  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 123
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
           + +H DL   N L+                             +K+ DFG + +  D++ 
Sbjct: 124 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 159
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
            SS+ S    R   PEV++   +S   D+W+ G ++ E+ +   +    F   E  EH+A
Sbjct: 160 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 219
Query: 301 MMERALGP 308
              R   P
Sbjct: 220 QGLRLYRP 227

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/222 (21%), Positives = 96/222 (43%), Gaps = 36/222 (16%)
Query: 71  LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           + ++G G +G V +     + + +A+K +R+    ++   + +D+   +   D       
Sbjct: 12  IMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD---CPFT 68
Query: 131 VQIRNWFDYRNHICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAYMHD- 187
           V           + I  E +  SL  F K+  +K    P D++ +    +++++ ++H  
Sbjct: 69  VTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK 128
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQ 245
           L +IH D+KP N+L+             ++ G+           +K+ DFG + +  D+ 
Sbjct: 129 LSVIHRDVKPSNVLI-------------NALGQ-----------VKMCDFGISGYLVDDV 164
Query: 246 NHSSIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILVEL 283
                   + Y APE I       G+S   D+WS+G  ++EL
Sbjct: 165 AKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIEL 206

>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 101/227 (44%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 14  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 73
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+++K     + L+ ++  Q+ 
Sbjct: 74  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQKHKERIDHIKLL-QYTSQIC 125
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI-KLIDFG 238
           + + Y+   R IH +L   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 126 KGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLT-------KVLPQDKEYYKVKEPG 178
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 179 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 213

>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 119/276 (43%), Gaps = 44/276 (15%)
Query: 69  KILSKMGEGTFGRVLEC-WDRQ---TQERVAIKVVRSIRKYRDAAMI--EIDVLQHLA-K 121
           K +  +GEG FG+V  C +D +   T E+VA+K ++        A +  EI++L++L  +
Sbjct: 12  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHE 71
Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE--FGRQL 178
           N       C +     D  N I ++ E L   SL ++L +NK     ++L ++  +  Q+
Sbjct: 72  NIVKYKGICTE-----DGGNGIKLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQI 123
Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
            + + Y+   + +H DL   N+L+ S   +K+  +               + AI+     
Sbjct: 124 CKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL-------------TKAIETDKEX 170
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
            T  D+++     S   + APE ++   +    D+WS G  L EL T         +   
Sbjct: 171 XTVKDDRD-----SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT-----YCDSDSSP 220
Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWP 334
           +A+  + +GP    M       T    + G RL  P
Sbjct: 221 MALFLKMIGPTHGQMTVTRLVNT---LKEGKRLPCP 253

>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/226 (24%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 16  KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                G  +    RN       + + F   G SL ++L+++K     + L+ ++  Q+ +
Sbjct: 76  IVKYKGVCYSAGRRNL-----KLIMEFLPYG-SLREYLQKHKERIDHIKLL-QYTSQICK 128
Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFGS 239
            + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G 
Sbjct: 129 GMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPGE 181
Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
           +               + APE +    +S   D+WS G +L EL T
Sbjct: 182 SPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 52/232 (22%)
Query: 74  MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
           +G G FG+V+E             +VA+K+++S      ++A M E+ ++ HL +++   
Sbjct: 54  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 110
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPF------PVDL--VREFGRQ 177
             + V +     +   + ++ E      L +FL+R            P++L  +  F  Q
Sbjct: 111 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           + + +A++     IH D+   N+LL +    K+                         DF
Sbjct: 169 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG------------------------DF 204
Query: 238 GSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
           G  A D  N S+ +   + R      APE I    ++   D+WS G +L E+
Sbjct: 205 G-LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 255

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 71/355 (20%), Positives = 131/355 (36%), Gaps = 81/355 (22%)
Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI-RKYRDAAMIEIDVLQHLAKNDKGG 126
           Y+I+  + +G F +++ C ++  +     K  +S+  K RD      D +   +K D   
Sbjct: 33  YRIIRTLNQGKFNKIILC-EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFK 91
Query: 127 SS----------HCVQIRNWFDYRNHICIVFEKL-GPSLFDF------LKRNKYCPFPVD 169
           +           +C+         + + I++E +   S+  F      L +N  C  P+ 
Sbjct: 92  NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 170 LVREFGRQLLESVAYMHDLRLI-HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
           +++   + +L S +Y+H+ + I H D+KP NIL                        + K
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL------------------------MDK 187
Query: 229 SSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSY---PCDMWSVGCILVEL 283
           +  +KL DFG + +  D +   S   T  +  PE       SY     D+WS+G  L  +
Sbjct: 188 NGRVKLSDFGESEYMVDKKIKGS-RGTYEFMPPEFFSNES-SYNGAKVDIWSLGICLYVM 245
Query: 284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESI 343
                 F        ++++E       +++     R    Y     +       +S E I
Sbjct: 246 FYNVVPFSL-----KISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDI 300
Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
                                    D L   LR +P+ER+T+  AL H +  + N
Sbjct: 301 -------------------------DFLKLFLRKNPAERITSEDALKHEWLADTN 330

>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 52/232 (22%)
Query: 74  MGEGTFGRVLEC-----WDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGG 126
           +G G FG+V+E             +VA+K+++S      ++A M E+ ++ HL +++   
Sbjct: 46  LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHE--- 102
Query: 127 SSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPF------PVDL--VREFGRQ 177
             + V +     +   + ++ E      L +FL+R            P++L  +  F  Q
Sbjct: 103 --NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           + + +A++     IH D+   N+LL +    K+                         DF
Sbjct: 161 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIG------------------------DF 196
Query: 238 GSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVEL 283
           G  A D  N S+ +   + R      APE I    ++   D+WS G +L E+
Sbjct: 197 G-LARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEI 247

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K+L  +G+G FG V+    R    +VA+K +++      A + E  V+  L        S
Sbjct: 24  KLLQTIGKGEFGDVMLGDYRGN--KVAVKCIKN-DATAQAFLAEASVMTQLRH------S 74
Query: 129 HCVQIRNWF-DYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           + VQ+     + +  + IV E +   SL D+L+         D + +F   + E++ Y+ 
Sbjct: 75  NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
               +H DL   N+L+                         + +  K+ DFG T   +  
Sbjct: 135 GNNFVHRDLAARNVLV------------------------SEDNVAKVSDFGLTKEASST 170
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
             +      + APE +    +S   D+WS G +L E+
Sbjct: 171 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 207

>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 79/256 (30%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R K+   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
                    H + + N             +   F K G +L  +L  KRN++ P+   P 
Sbjct: 79  G--------HHLNVVNLLGACTKPGGPLMVITEFCKFG-NLSTYLRSKRNEFVPYKVAPE 129
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------- 210
           DL ++F           Q+ + + ++   + IH DL   NILL     +K+         
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 211 ---PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW 267
              P Y R     +P +                               + APE I    +
Sbjct: 190 YKDPDYVRKGDARLPLK-------------------------------WMAPETIFDRVY 218
Query: 268 SYPCDMWSVGCILVEL 283
           +   D+WS G +L E+
Sbjct: 219 TIQSDVWSFGVLLWEI 234

>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 67/250 (26%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R K+   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
                    H + + N             + + F K G +L  +L  KRN++ P+   P 
Sbjct: 79  G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPE 129
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG 219
           DL ++F           Q+ + + ++   + IH DL   NILL                 
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----------------- 172
Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDM 273
                   + + +K+ DFG  A D       V     R      APE I    ++   D+
Sbjct: 173 -------SEKNVVKICDFG-LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 274 WSVGCILVEL 283
           WS G +L E+
Sbjct: 225 WSFGVLLWEI 234

>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 57/256 (22%), Positives = 97/256 (37%), Gaps = 79/256 (30%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R K+   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
                    H + + N             +   F K G +L  +L  KRN++ P+   P 
Sbjct: 79  G--------HHLNVVNLLGACTKPGGPLMVITEFCKFG-NLSTYLRSKRNEFVPYKVAPE 129
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL--------- 210
           DL ++F           Q+ + + ++   + IH DL   NILL     +K+         
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
Query: 211 ---PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW 267
              P Y R     +P +                               + APE I    +
Sbjct: 190 YKDPDYVRKGDARLPLK-------------------------------WMAPETIFDRVY 218
Query: 268 SYPCDMWSVGCILVEL 283
           +   D+WS G +L E+
Sbjct: 219 TIQSDVWSFGVLLWEI 234

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K+L  +G+G FG V+    R    +VA+K +++      A + E  V+  L        S
Sbjct: 196 KLLQTIGKGEFGDVMLGDYRGN--KVAVKCIKN-DATAQAFLAEASVMTQLRH------S 246
Query: 129 HCVQIRNWF-DYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           + VQ+     + +  + IV E +   SL D+L+         D + +F   + E++ Y+ 
Sbjct: 247 NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
               +H DL   N+L+                         + +  K+ DFG T   +  
Sbjct: 307 GNNFVHRDLAARNVLV------------------------SEDNVAKVSDFGLTKEASST 342
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
             +      + APE +    +S   D+WS G +L E+
Sbjct: 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 379

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 97/255 (38%), Gaps = 77/255 (30%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R  +   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 28  RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPFPVDLV 171
                    H + + N             + + F K G +L  +L  KRN++ P+  DL 
Sbjct: 88  G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYK-DLY 137
Query: 172 REF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL------------ 210
           ++F           Q+ + + ++   + IH DL   NILL     +K+            
Sbjct: 138 KDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKD 197
Query: 211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYP 270
           P Y R     +P +                               + APE I    ++  
Sbjct: 198 PDYVRKGDARLPLK-------------------------------WMAPETIFDRVYTIQ 226
Query: 271 CDMWSVGCILVELCT 285
            D+WS G +L E+ +
Sbjct: 227 SDVWSFGVLLWEIFS 241

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K+L  +G+G FG V+    R    +VA+K +++      A + E  V+  L        S
Sbjct: 9   KLLQTIGKGEFGDVMLGDYRGN--KVAVKCIKN-DATAQAFLAEASVMTQLRH------S 59
Query: 129 HCVQIRNWF-DYRNHICIVFEKLGP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           + VQ+     + +  + IV E +   SL D+L+         D + +F   + E++ Y+ 
Sbjct: 60  NLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
               +H DL   N+L+                         + +  K+ DFG T   +  
Sbjct: 120 GNNFVHRDLAARNVLV------------------------SEDNVAKVSDFGLTKEASST 155
Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
             +      + APE +    +S   D+WS G +L E+
Sbjct: 156 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEI 192

>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 67/250 (26%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R K+   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
                    H + + N             + + F K G +L  +L  KRN++ P+   P 
Sbjct: 88  G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPE 138
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG 219
           DL ++F           Q+ + + ++   + IH DL   NILL                 
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----------------- 181
Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDM 273
                   + + +K+ DFG  A D       V     R      APE I    ++   D+
Sbjct: 182 -------SEKNVVKICDFG-LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 274 WSVGCILVEL 283
           WS G +L E+
Sbjct: 234 WSFGVLLWEI 243

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 53/224 (23%), Positives = 92/224 (41%), Gaps = 39/224 (17%)
Query: 72  SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVL-------QHLAKNDK 124
           +KMGEG FG V + +   T   VA+K        + AAM++I          Q +    K
Sbjct: 31  NKMGEGGFGVVYKGYVNNT--TVAVK--------KLAAMVDITTEELKQQFDQEIKVMAK 80
Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLK-RNKYCPFPVDLVREFGRQLLESV 182
               + V++  +    + +C+V+  +   SL D L   +   P    +  +  +     +
Sbjct: 81  CQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGI 140
Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            ++H+   IH D+K  NILL  +   K+  +  + + E                F     
Sbjct: 141 NFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASE---------------KFAQXVM 185
Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
             +    IV T  Y APE + G   +   D++S G +L+E+ TG
Sbjct: 186 XXR----IVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITG 224

>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 100/250 (40%), Gaps = 67/250 (26%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R K+   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 28  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
                    H + + N             + + F K G +L  +L  KRN++ P+   P 
Sbjct: 88  G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYKVAPE 138
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG 219
           DL ++F           Q+ + + ++   + IH DL   NILL                 
Sbjct: 139 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----------------- 181
Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDM 273
                   + + +K+ DFG  A D       V     R      APE I    ++   D+
Sbjct: 182 -------SEKNVVKICDFG-LARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 274 WSVGCILVEL 283
           WS G +L E+
Sbjct: 234 WSFGVLLWEI 243

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 101/238 (42%), Gaps = 37/238 (15%)
Query: 72  SKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC 130
           +++G G+FG V +  W      ++ +KVV    +   A   E+ VL+          +  
Sbjct: 42  TRIGSGSFGTVYKGKWHGDVAVKI-LKVVDPTPEQFQAFRNEVAVLR---------KTRH 91
Query: 131 VQIRNWFDY--RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           V I  +  Y  ++++ IV +   G SL+  L   +   F +  + +  RQ  + + Y+H 
Sbjct: 92  VNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQE-TKFQMFQLIDIARQTAQGMDYLHA 150
Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
             +IH D+K  NI L     +K+  +  ++              +K    GS   +    
Sbjct: 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLAT--------------VKSRWSGSQQVEQPTG 196
Query: 248 SSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
           S +     + APEVI       +S+  D++S G +L EL TGE  +    N + +  M
Sbjct: 197 SVL-----WMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFM 249

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 58/276 (21%), Positives = 103/276 (37%), Gaps = 74/276 (26%)
Query: 130 CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPF---PVDLVREFGRQLLESVAYMH 186
           C +    F Y     I  E    +L +++++  +      P+ L++    Q    +A++H
Sbjct: 85  CTEKDRQFQY-----IAIELCAATLQEYVEQKDFAHLGLEPITLLQ----QTTSGLAHLH 135
Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
            L ++H DLKP NIL      I +P         +    L K  A+     G  +F  + 
Sbjct: 136 SLNIVHRDLKPHNIL------ISMPNAHGKIKAMISDFGLCKKLAV-----GRHSFSRR- 183
Query: 247 HSSIVSTRHYRAPEVI---LGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
            S +  T  + APE++        +Y  D++S GC+                        
Sbjct: 184 -SGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY---------------------- 220
Query: 304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA 363
                   ++I   S    K  +R +  N   GA S + +   K  D +           
Sbjct: 221 --------YVISEGSHPFGKSLQRQA--NILLGACSLDCLHPEKHEDVIAR--------- 261
Query: 364 RSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                +L+  ++  DP +R +A+  L HPFF +L +
Sbjct: 262 -----ELIEKMIAMDPQKRPSAKHVLKHPFFWSLEK 292

>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 99/227 (43%), Gaps = 37/227 (16%)
Query: 69  KILSKMGEGTFGRVLEC----WDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C        T E VA+K ++ S  ++      EI++L+ L  ++
Sbjct: 16  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDN 75
Query: 124 ---KGGSSHCVQIRNWFDYRNHICIVFEKLG-PSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  +    RN       + ++ E L   SL D+L+ +      + L+ ++  Q+ 
Sbjct: 76  IVKYKGVCYSAGRRN-------LKLIMEYLPYGSLRDYLQAHAERIDHIKLL-QYTSQIC 127
Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS-SAIKLIDFG 238
           + + Y+   R IH DL   NIL+ +   +K+  +  +       + LP+     K+ + G
Sbjct: 128 KGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLT-------KVLPQDKEXXKVKEPG 180
Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
            +               + APE +    +S   D+WS G +L EL T
Sbjct: 181 ESPI------------FWYAPESLTESKFSVASDVWSFGVVLYELFT 215

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 23/155 (14%)
Query: 151 GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL 210
           G SL+  L  ++   F +  + +  RQ    + Y+H   +IH DLK  NI L     +K+
Sbjct: 91  GSSLYHHLHASE-TKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKI 149
Query: 211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL---GLGW 267
             +  ++              +K    GS  F+  + S +     + APEVI       +
Sbjct: 150 GDFGLAT--------------VKSRWSGSHQFEQLSGSIL-----WMAPEVIRMQDSNPY 190
Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
           S+  D+++ G +L EL TG+  +    N + +  M
Sbjct: 191 SFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEM 225

>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 60/250 (24%), Positives = 99/250 (39%), Gaps = 67/250 (26%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R K+   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 19  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHI 78
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPF---PV 168
                    H + + N             +   F K G +L  +L  KRN++ P+   P 
Sbjct: 79  G--------HHLNVVNLLGACTKPGGPLMVITEFCKFG-NLSTYLRSKRNEFVPYKVAPE 129
Query: 169 DLVREF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG 219
           DL ++F           Q+ + + ++   + IH DL   NILL                 
Sbjct: 130 DLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL----------------- 172
Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDM 273
                   + + +K+ DFG  A D       V     R      APE I    ++   D+
Sbjct: 173 -------SEKNVVKICDFG-LARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 224
Query: 274 WSVGCILVEL 283
           WS G +L E+
Sbjct: 225 WSFGVLLWEI 234

>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 96/253 (37%), Gaps = 77/253 (30%)
Query: 67  RYKILSKMGEGTFGRVLEC----WDRQTQER-VAIKVVRSIRKYRD--AAMIEIDVLQHL 119
           R  +   +G G FG+V+E      D+    R VA+K+++    + +  A M E+ +L H+
Sbjct: 28  RLNLGKPLGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHI 87
Query: 120 AKNDKGGSSHCVQIRNWFDYRNH------ICIVFEKLGPSLFDFL--KRNKYCPFPVDLV 171
                    H + + N             + + F K G +L  +L  KRN++ P+  DL 
Sbjct: 88  G--------HHLNVVNLLGACTKPGGPLMVIVEFCKFG-NLSTYLRSKRNEFVPYK-DLY 137
Query: 172 REF---------GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL------------ 210
           ++F           Q+ + + ++   + IH DL   NILL     +K+            
Sbjct: 138 KDFLTLEHLICYSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKD 197
Query: 211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYP 270
           P Y R     +P +                               + APE I    ++  
Sbjct: 198 PDYVRKGDARLPLK-------------------------------WMAPETIFDRVYTIQ 226
Query: 271 CDMWSVGCILVEL 283
            D+WS G +L E+
Sbjct: 227 SDVWSFGVLLWEI 239

>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r In Complex With Dasatinib Length = 265

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 55/248 (22%), Positives = 102/248 (41%), Gaps = 41/248 (16%)
Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSH 129
            L ++G G FG V++    + Q  VAIK+++      D  + E  V+ +L+         
Sbjct: 13  FLKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHE------K 65
Query: 130 CVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
            VQ+      +  I I+ E +    L ++L+  ++  F    + E  + + E++ Y+   
Sbjct: 66  LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESK 124
Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQN 246
           + +H DL   N L+                             +K+ DFG + +  D++ 
Sbjct: 125 QFLHRDLAARNCLV------------------------NDQGVVKVSDFGLSRYVLDDEY 160
Query: 247 HSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCTGEAL----FQTHENLEHLA 300
            SS  S    R   PEV++   +S   D+W+ G ++ E+ +   +    F   E  EH+A
Sbjct: 161 TSSRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
Query: 301 MMERALGP 308
              R   P
Sbjct: 221 QGLRLYRP 228

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	399
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	0.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	0.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	0.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	1e-162
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	1e-159
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-145
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	1e-123
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-60
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	9e-58
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	3e-57
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-56
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	9e-56
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-55
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	2e-55
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	1e-54
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	1e-54
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-54
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-54
3o0g_A	292	Cell division protein kinase 5; kinase activator c	3e-54
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	4e-54
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	6e-54
3niz_A	311	Rhodanese family protein; structural genomics, str	7e-54
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	4e-53
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	1e-51
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	2e-51
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-51
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	8e-51
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	4e-50
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	5e-49
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-48
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	6e-48
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	6e-48
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-47
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	3e-47
2a19_B	284	Interferon-induced, double-stranded RNA-activated	4e-47
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	2e-46
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-46
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-46
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	4e-46
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	6e-46
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	2e-45
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	2e-45
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	2e-45
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	2e-44
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-44
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-44
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	2e-44
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-44
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	2e-44
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	3e-44
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	5e-44
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	6e-44
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-43
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-43
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	3e-43
3rp9_A	458	Mitogen-activated protein kinase; structural genom	3e-43
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	4e-43
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	5e-43
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	5e-43
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-43
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	5e-43
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	7e-43
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	9e-43
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	1e-42
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	1e-42
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	2e-42
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	2e-42
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	2e-42
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	2e-42
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	3e-42
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	5e-42
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	7e-42
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	2e-41
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	4e-41
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	9e-05
3bhy_A	283	Death-associated protein kinase 3; death associate	8e-41
3bhy_A	283	Death-associated protein kinase 3; death associate	3e-05
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	1e-40
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	3e-40
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	7e-05
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	3e-40
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	6e-05
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	3e-40
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	9e-05
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	3e-40
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	2e-05
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	4e-40
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	5e-40
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	9e-05
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	5e-40
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	5e-40
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	2e-39
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-04
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	2e-39
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	6e-05
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	3e-39
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	5e-39
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-38
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	3e-05
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	2e-38
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-38
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-38
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	5e-38
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	7e-38
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	3e-37
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-37
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	9e-37
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-36
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-36
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	2e-36
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	4e-36
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	1e-34
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	1e-33
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	2e-33
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	1e-32
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	6e-32
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	6e-31
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	2e-29
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	1e-28
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	4e-28
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	8e-28
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	1e-27
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	2e-27
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-27
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	7e-27
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-26
3an0_A	340	Dual specificity mitogen-activated protein kinase;	2e-26
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	3e-26
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	4e-26
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	4e-26
3aln_A	327	Dual specificity mitogen-activated protein kinase;	1e-25
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	1e-25
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	3e-25
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	8e-25
2dyl_A	318	Dual specificity mitogen-activated protein kinase	1e-24
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-24
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	2e-24
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-24
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-24
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	3e-24
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	7e-24
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	8e-24
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	1e-23
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	1e-23
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	2e-23
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	7e-23
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	1e-22
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	1e-22
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	1e-22
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	2e-22
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	5e-22
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	6e-22
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	2e-21
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	3e-21
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	7e-21
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	1e-20
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	2e-20
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	2e-20
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	4e-20
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	4e-20
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	5e-20
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	7e-20
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	7e-20
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	9e-20
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	1e-19
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	2e-19
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	3e-19
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	3e-19
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	4e-19
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	4e-19
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	5e-19
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	1e-18
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	4e-18
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-17
3ork_A	311	Serine/threonine protein kinase; structural genomi	7e-17
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	3e-16
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	7e-16
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-15
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	1e-15
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	2e-15
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	2e-15
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	6e-15
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	7e-15
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	1e-14
3q4u_A	301	Activin receptor type-1; structural genomics conso	2e-14
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	3e-14
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	2e-12
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	2e-12
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	4e-12
3uqc_A	286	Probable conserved transmembrane protein; structur	6e-12
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-11
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	1e-11
3soc_A	322	Activin receptor type-2A; structural genomics cons	2e-11
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	2e-10
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	2e-10
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	5e-10
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	1e-09
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-09
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	2e-09
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-09
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	3e-09
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	3e-09
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	4e-09
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	4e-09
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	5e-09
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	6e-09
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	7e-09
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	8e-09
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	1e-08
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	1e-08
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	2e-08
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	3e-08
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	4e-08
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	1e-07
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	2e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	2e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	3e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	4e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	5e-07
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	7e-06
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	1e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	2e-05
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	5e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	7e-05
3pls_A	298	Macrophage-stimulating protein receptor; protein k	2e-04
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	2e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	3e-04

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score =  541 bits (1395), Expect = 0.0
 Identities = 140/359 (38%), Positives = 210/359 (58%), Gaps = 10/359 (2%)

Query: 39  AAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKV 98
           ++   +   + DD   H+ +  G  L   + ++ KMG+GTFGRVL C     ++  A+KV
Sbjct: 8   SSGRENLYFQGDDEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKV 67

Query: 99  VRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFL 158
           VR+I+KY  +A IE D+L+ +  +D   + + V+    F Y +H+C++FE LGPSL++ +
Sbjct: 68  VRNIKKYTRSAKIEADILKKIQNDDINNN-NIVKYHGKFMYYDHMCLIFEPLGPSLYEII 126

Query: 159 KRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS 218
            RN Y  F ++ ++ +  ++L+++ Y+  + L HTDLKPENILL    F K     R  +
Sbjct: 127 TRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVT 186

Query: 219 GEMPFRC-LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVG 277
                +    KS+ IKLIDFG   F +  H SI++TR YRAPEVIL LGW    DMWS G
Sbjct: 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFG 246

Query: 278 CILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASR-GTEKYFRRGS-RLNWPE 335
           C+L EL TG  LF+THE++EHLAMME  + P+P++M+  A++    KY  +   +L WPE
Sbjct: 247 CVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPE 306

Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
            A S  SIK VKK   L  ++   +        D L+ +L+ DP+ R +  + L H F 
Sbjct: 307 NASSINSIKHVKKCLPLYKIIKHEL------FCDFLYSILQIDPTLRPSPAELLKHKFL 359

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score =  526 bits (1356), Expect = 0.0
 Identities = 155/347 (44%), Positives = 223/347 (64%), Gaps = 12/347 (3%)

Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQ-ERVAIKVVRSIRKYRDAAMIE 112
            H +   G+ L+ RY+I+  +GEG FG+V+EC D +     VA+K+V+++ +Y +AA  E
Sbjct: 2   MHLICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSE 61

Query: 113 IDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVR 172
           I VL+HL   D   +  CVQ+  WF++  HICIVFE LG S +DF+K N + PF +D +R
Sbjct: 62  IQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIR 121

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
           +   Q+ +SV ++H  +L HTDLKPENIL V S++ +    K              +  I
Sbjct: 122 KMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRD-----ERTLINPDI 176

Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT 292
           K++DFGS  +D+++HS++VSTRHYRAPEVIL LGWS PCD+WS+GCIL+E   G  +F T
Sbjct: 177 KVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT 236

Query: 293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL 352
           H++ EHLAMMER LGPLP+HMI++  +   KYF    RL+W E + +   +    K    
Sbjct: 237 HDSKEHLAMMERILGPLPKHMIQKTRK--RKYFHHD-RLDWDEHSSAGRYVSRACK-PLK 292

Query: 353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           + M+S  V+  R  L DL+  +L YDP++R+T R+AL HPFF  L +
Sbjct: 293 EFMLSQDVEHER--LFDLIQKMLEYDPAKRITLREALKHPFFDLLKK 337

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score =  518 bits (1336), Expect = 0.0
 Identities = 159/350 (45%), Positives = 230/350 (65%), Gaps = 12/350 (3%)

Query: 49  DDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQ-TQERVAIKVVRSIRKYRD 107
           +DD+EGH V  +G+ L  RY+I+  +GEGTFG+V+EC D    + +VA+K++R++ KYR+
Sbjct: 2   EDDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYRE 61

Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           AA +EI+VL+ + + DK     CV + +WF++  H+CI FE LG + F+FLK N + P+P
Sbjct: 62  AARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYP 121

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           +  VR    QL  ++ ++H+ +L HTDLKPENIL V+SEF  L    +S   +       
Sbjct: 122 LPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKS-----V 176

Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           K+++I++ DFGS  FD+++H++IV+TRHYR PEVIL LGW+ PCD+WS+GCIL E   G 
Sbjct: 177 KNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGF 236

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            LFQTHEN EHL MME+ LGP+P HMI R  +  +KYF +G  L W E +     +K   
Sbjct: 237 TLFQTHENREHLVMMEKILGPIPSHMIHRTRK--QKYFYKG-GLVWDENSSDGRYVKENC 293

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           K   LK+ + L        L DL+  +L +DP++R+T  +AL HPFF  L
Sbjct: 294 K--PLKSYM-LQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGL 340

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score =  460 bits (1185), Expect = e-162
 Identities = 115/364 (31%), Positives = 187/364 (51%), Gaps = 35/364 (9%)

Query: 44  SPPRRD--DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS 101
             P     DD +G YV    +++  RY++L  +G+G+FG+V++ +D +  + VA+K+VR+
Sbjct: 73  GGPNNGGYDDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN 132

Query: 102 IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRN 161
            +++   A  EI +L+HL K DK  + + + +   F +RNHIC+ FE L  +L++ +K+N
Sbjct: 133 EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKN 192

Query: 162 KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM 221
           K+  F + LVR+F   +L+ +  +H  R+IH DLKPENILL                   
Sbjct: 193 KFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ----------------- 235

Query: 222 PFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILV 281
                   S IK+IDFGS+ +++Q   + + +R YRAPEVILG  +  P DMWS+GCIL 
Sbjct: 236 -----QGRSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILA 290

Query: 282 ELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW------PE 335
           EL TG  L    +  + LA M   LG   + ++  + R  + +        +       +
Sbjct: 291 ELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKR-AKNFVSSKGYPRYCTVTTLSD 349

Query: 336 GAVSRESIKAVKK----LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
           G+V     ++ +         +   +           D L   L +DP+ R+T  QAL H
Sbjct: 350 GSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRH 409

Query: 392 PFFR 395
           P+ R
Sbjct: 410 PWLR 413

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score =  451 bits (1161), Expect = e-159
 Identities = 115/363 (31%), Positives = 186/363 (51%), Gaps = 40/363 (11%)

Query: 50  DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAA 109
           DD    Y+   GE    RY+I S +G+G+FG+V++ +DR  QE VAIK++++ + + + A
Sbjct: 38  DDDNYDYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQA 97

Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
            IE+ +L+ + K+D     + V ++  F +RNH+C+VFE L  +L+D L+   +    ++
Sbjct: 98  QIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLN 157

Query: 170 LVREFGRQLLESVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
           L R+F +Q+  ++ ++   +L +IH DLKPENILL +                      P
Sbjct: 158 LTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN----------------------P 195

Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           K SAIK++DFGS+    Q     + +R YR+PEV+LG+ +    DMWS+GCILVE+ TGE
Sbjct: 196 KRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGE 255

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVS----RESI 343
            LF     ++ +  +   LG  P H++ +A +   K+F +     W              
Sbjct: 256 PLFSGANEVDQMNKIVEVLGIPPAHILDQAPK-ARKFFEKLPDGTWNLKKTKDGKREYKP 314

Query: 344 KAVKKLDRLKNMV-----------SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHP 392
              +KL  +  +            S H         DL+  +L YDP  R+    AL H 
Sbjct: 315 PGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHS 374

Query: 393 FFR 395
           FF+
Sbjct: 375 FFK 377

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score =  416 bits (1072), Expect = e-145
 Identities = 99/365 (27%), Positives = 174/365 (47%), Gaps = 43/365 (11%)

Query: 49  DDDREGHYVFNLGENLT-PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD 107
           D    G++    GE     RY ++ K+G G F  V    D      VA+K+VR  + Y +
Sbjct: 1   DYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60

Query: 108 AAMIEIDVLQHLAKNDKG-----GSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFL 158
           AA  EI +LQ +   D       G++H +++ + F+++     H+ +VFE LG +L   +
Sbjct: 61  AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 120

Query: 159 KRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSS 217
           K+ ++   P+  V++  +QLL  + YMH    +IHTD+KPEN+L+   +  +        
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE-------- 172

Query: 218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVG 277
                         IK+ D G+  + ++++++ + TR YR+PEV+LG  W    D+WS  
Sbjct: 173 ----------NLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTA 222

Query: 278 CILVELCTGEALFQTHE------NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRL 331
           C++ EL TG+ LF+  E      + +H+A +   LG LP +++R        +  RG   
Sbjct: 223 CLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLR 282

Query: 332 NWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
           N  +             L+ +              ++D L  +L+ DP +R  A   +NH
Sbjct: 283 NISK--------LKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNH 334

Query: 392 PFFRN 396
           P+ ++
Sbjct: 335 PWLKD 339

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score =  361 bits (928), Expect = e-123
 Identities = 103/387 (26%), Positives = 180/387 (46%), Gaps = 46/387 (11%)

Query: 48  RDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRD 107
            D  + G+++  +G+    RY ++ K+G G F  V   WD Q ++ VA+KVV+S   Y +
Sbjct: 19  NDYCKGGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTE 78

Query: 108 AAMIEIDVLQHLAKNDKG--GSSHCVQIRNWFDYR----NHICIVFEKLGPSLFDFLKRN 161
            A+ EI +L+ +  +D         VQ+ + F        HIC+VFE LG  L  ++ ++
Sbjct: 79  TALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKS 138

Query: 162 KYCPFPVDLVREFGRQLLESVAYMH-DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE 220
            Y   P+  V++  +Q+L+ + Y+H   R+IHTD+KPENILL  +E         ++  +
Sbjct: 139 NYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQ 198

Query: 221 MPFRCLP-------------------------KSSAIKLIDFGSTAFDNQNHSSIVSTRH 255
                 P                         +   +K+ D G+  + +++ +  + TR 
Sbjct: 199 RSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQ 258

Query: 256 YRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE------HLAMMERALGPL 309
           YR+ EV++G G++ P D+WS  C+  EL TG+ LF+ H   E      H+A++   LG +
Sbjct: 259 YRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKV 318

Query: 310 PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD 369
           P  +I       E + ++G   +  +          V+K +              +  TD
Sbjct: 319 PRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYE--------WSQEEAAGFTD 370

Query: 370 LLHGLLRYDPSERLTARQALNHPFFRN 396
            L  +L   P +R TA + L HP+  +
Sbjct: 371 FLLPMLELIPEKRATAAECLRHPWLNS 397

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  196 bits (501), Expect = 3e-60
 Identities = 91/345 (26%), Positives = 147/345 (42%), Gaps = 67/345 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA----AMIEIDVLQHLAKN 122
           +Y+ + K+GEG++G V +C +R T + VAIK      +        A+ EI +L+ L   
Sbjct: 4   KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFL-ESEDDPVIKKIALREIRMLKQL--- 59

Query: 123 DKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                 H   V +   F  +  + +VFE    ++   L R +    P  LV+    Q L+
Sbjct: 60  -----KHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR-GVPEHLVKSITWQTLQ 113

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
           +V + H    IH D+KPENIL+             +               IKL DFG  
Sbjct: 114 AVNFCHKHNCIHRDVKPENILI-------------TKHSV-----------IKLCDFGFA 149

Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                 +  +   V+TR YR+PE+++G   +  P D+W++GC+  EL +G  L+    ++
Sbjct: 150 RLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV 209

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           + L ++ + LG L                      +      S     +  K+   ++M 
Sbjct: 210 DQLYLIRKTLGDLIPR-------------------HQQV--FSTNQYFSGVKIPDPEDME 248

Query: 357 SL--HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
            L             LL G L  DP+ERLT  Q L+HP+F N+ E
Sbjct: 249 PLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE 293

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  190 bits (486), Expect = 9e-58
 Identities = 83/344 (24%), Positives = 143/344 (41%), Gaps = 67/344 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA----AMIEIDVLQHLAKN 122
           +Y+ L  +GEG++G V++C ++ T   VAIK               AM EI +L+ L   
Sbjct: 26  KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFL-ESDDDKMVKKIAMREIKLLKQL--- 81

Query: 123 DKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                 H   V +      +    +VFE +  ++ D L+          +V+++  Q++ 
Sbjct: 82  -----RHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIIN 135

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
            + + H   +IH D+KPENIL+             S SG            +KL DFG  
Sbjct: 136 GIGFCHSHNIIHRDIKPENILV-------------SQSGV-----------VKLCDFGFA 171

Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENL 296
            + A   + +   V+TR YRAPE+++G   +    D+W++GC++ E+  GE LF    ++
Sbjct: 172 RTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDI 231

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           + L  +   LG L                      +      ++  + A  +L  +K   
Sbjct: 232 DQLYHIMMCLGNLIPR-------------------HQEL--FNKNPVFAGVRLPEIKERE 270

Query: 357 SL--HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
            L     +    + DL    L  DP +R    + L+H FF+   
Sbjct: 271 PLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMDG 314

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  186 bits (475), Expect = 2e-56
 Identities = 84/347 (24%), Positives = 141/347 (40%), Gaps = 69/347 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA-------AMIEIDVLQHL 119
           RY+ ++++G G +G V +  D  +   VA+K VR +              + E+ +L+ L
Sbjct: 10  RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVR-VPNGGGGGGGLPISTVREVALLRRL 68

Query: 120 AKNDKGGSSH-------CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVR 172
              +     H        V   +  D    + +VFE +   L  +L +      P + ++
Sbjct: 69  EAFE-----HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIK 123

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
           +  RQ L  + ++H   ++H DLKPENIL+             +S G            +
Sbjct: 124 DLMRQFLRGLDFLHANCIVHRDLKPENILV-------------TSGGT-----------V 159

Query: 233 KLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
           KL DFG +  +      + +V T  YRAPEV+L   ++ P DMWSVGCI  E+   + LF
Sbjct: 160 KLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLF 219

Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD 350
             +   + L  +   +G  P           E         +WP       S+       
Sbjct: 220 CGNSEADQLGKIFDLIGL-P----------PED--------DWPR--DV--SLPRGAFPP 256

Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           R    V   V     +   LL  +L ++P +R++A +AL H +    
Sbjct: 257 RGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKD 303

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  185 bits (472), Expect = 9e-56
 Identities = 87/381 (22%), Positives = 154/381 (40%), Gaps = 78/381 (20%)

Query: 38  AAAKHVSPPRRDDDREGHYVFNLGENLTPR----YKILSKMGEGTFGRVLECWDRQTQER 93
           A   H      +   +G    ++    +      Y+ ++K+GEGT+G V +  D  T E 
Sbjct: 2   AHHHHHHMGTLEAQTQGPGSMSVSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNET 61

Query: 94  VAIKVVR-----------SIRKYRDAAMIEIDVLQHLAKNDKGGSSH--CVQIRNWFDYR 140
           VAIK +R           +IR        E+ +L+ L         H   +++++   + 
Sbjct: 62  VAIKRIRLEHEEEGVPGTAIR--------EVSLLKEL--------QHRNIIELKSVIHHN 105

Query: 141 NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI 200
           + + ++FE     L  ++ +N      + +++ F  QL+  V + H  R +H DLKP+N+
Sbjct: 106 HRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL 163

Query: 201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDNQNHSSIVSTRHYR 257
           LL  S+  +        +             +K+ DFG   +     +  +  + T  YR
Sbjct: 164 LLSVSDASE--------TPV-----------LKIGDFGLARAFGIPIRQFTHEIITLWYR 204

Query: 258 APEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRR 316
            PE++LG   +S   D+WS+ CI  E+     LF     ++ L  +   LG  P      
Sbjct: 205 PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGL-P------ 257

Query: 317 ASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR 376
                +          WP G  +    K      R K +  +          DLL  +L 
Sbjct: 258 ----DDT--------TWP-GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLE 304

Query: 377 YDPSERLTARQALNHPFFRNL 397
            DP +R++A+ AL HP+F + 
Sbjct: 305 MDPVKRISAKNALEHPYFSHN 325

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  184 bits (468), Expect = 2e-55
 Identities = 72/349 (20%), Positives = 125/349 (35%), Gaps = 98/349 (28%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHLAKND 123
            Y IL ++G G   +V +  +   ++  AIK V       +       EI  L  L    
Sbjct: 29  IYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL---- 83

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
           +  S   +++ ++     +I +V E     L  +LK+ K         + + + +LE+V 
Sbjct: 84  QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVH 141

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
            +H   ++H+DLKP N L+V                            +KLIDFG +   
Sbjct: 142 TIHQHGIVHSDLKPANFLIVDGM-------------------------LKLIDFGIANQM 176

Query: 243 DNQNHS----SIVSTRHYRAPEVILGLGW-----------SYPCDMWSVGCILVELCTGE 287
                S    S V T +Y  PE I  +             S   D+WS+GCIL  +  G+
Sbjct: 177 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
             FQ   N   ++ +   + P                      + +P+    ++      
Sbjct: 237 TPFQQIIN--QISKLHAIIDP-------------------NHEIEFPDI-PEKD------ 268

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                              L D+L   L+ DP +R++  + L HP+ + 
Sbjct: 269 -------------------LQDVLKCCLKRDPKQRISIPELLAHPYVQI 298

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  184 bits (469), Expect = 2e-55
 Identities = 100/349 (28%), Positives = 146/349 (41%), Gaps = 77/349 (22%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----------SIRKYRDAAMIEIDVL 116
            Y  L K+GEGT+  V +   + T   VA+K +R          +IR        E+ +L
Sbjct: 3   TYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR--------EVSLL 54

Query: 117 QHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
           + L         H   V + +       + +VFE L   L  +L         +  V+ F
Sbjct: 55  KDL--------KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLF 105

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             QLL  +AY H  +++H DLKP+N+L+             +  GE           +KL
Sbjct: 106 LFQLLRGLAYCHRQKVLHRDLKPQNLLI-------------NERGE-----------LKL 141

Query: 235 IDFG-STAFD--NQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALF 290
            DFG + A     + + + V T  YR P+++LG   +S   DMW VGCI  E+ TG  LF
Sbjct: 142 ADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLF 201

Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD 350
                 E L  + R LG  P          TE+         WP G +S E  K      
Sbjct: 202 PGSTVEEQLHFIFRILGT-P----------TEE--------TWP-GILSNEEFKTYNYPK 241

Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                +  H  R  S   DLL  LL+++   R++A  A+ HPFF +L E
Sbjct: 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGE 290

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  181 bits (462), Expect = 1e-54
 Identities = 94/349 (26%), Positives = 145/349 (41%), Gaps = 80/349 (22%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----------SIRKYRDAAMIEIDV 115
           +Y  L K+GEGT+G V +  +    E  A+K +R           +IR        EI +
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIR--------EISI 53

Query: 116 LQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
           L+ L         H   V++ +    +  + +VFE L   L   L   +         + 
Sbjct: 54  LKEL--------KHSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKS 104

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F  QLL  +AY HD R++H DLKP+N+L+             +  GE           +K
Sbjct: 105 FLLQLLNGIAYCHDRRVLHRDLKPQNLLI-------------NREGE-----------LK 140

Query: 234 LIDFG-STAF--DNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEAL 289
           + DFG + AF    + ++  + T  YRAP+V++G   +S   D+WSVGCI  E+  G  L
Sbjct: 141 IADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPL 200

Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
           F      + L  + R LG  P            K        NWP              +
Sbjct: 201 FPGVSEADQLMRIFRILGT-P----------NSK--------NWP-NVTELPKYDPNFTV 240

Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
                     +     +  DLL  +L+ DP++R+TA+QAL H +F+  N
Sbjct: 241 -YEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKENN 288

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  183 bits (466), Expect = 1e-54
 Identities = 74/349 (21%), Positives = 126/349 (36%), Gaps = 98/349 (28%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQHLAKND 123
            Y IL ++G G   +V +  +   ++  AIK V       +       EI  L  L    
Sbjct: 10  IYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL---- 64

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
           +  S   +++ ++     +I +V E     L  +LK+ K         + + + +LE+V 
Sbjct: 65  QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVH 122

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
            +H   ++H+DLKP N L+V                            +KLIDFG +   
Sbjct: 123 TIHQHGIVHSDLKPANFLIVDGM-------------------------LKLIDFGIANQM 157

Query: 243 DNQNHS----SIVSTRHYRAPEVILGLG-----------WSYPCDMWSVGCILVELCTGE 287
                S    S V T +Y  PE I  +             S   D+WS+GCIL  +  G+
Sbjct: 158 QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
             FQ   N   ++ +   +   P H I                  +P+    ++      
Sbjct: 218 TPFQQIIN--QISKLHAII--DPNHEI-----------------EFPDI-PEKD------ 249

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                              L D+L   L+ DP +R++  + L HP+ + 
Sbjct: 250 -------------------LQDVLKCCLKRDPKQRISIPELLAHPYVQI 279

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  182 bits (464), Expect = 2e-54
 Identities = 91/352 (25%), Positives = 157/352 (44%), Gaps = 81/352 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVR-----------SIRKYRDAAMIEID 114
           +Y+ ++++GEG +G+V +  D +     VA+K VR           +IR        E+ 
Sbjct: 12  QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR--------EVA 63

Query: 115 VLQHLAKNDKGGSSH-------CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFP 167
           VL+HL   +     H        V   +  D    + +VFE +   L  +L +      P
Sbjct: 64  VLRHLETFE-----HPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVP 118

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
            + +++   QLL  + ++H  R++H DLKP+NIL+             +SSG+       
Sbjct: 119 TETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV-------------TSSGQ------- 158

Query: 228 KSSAIKLIDFG-STAFDN-QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT 285
               IKL DFG +  +      +S+V T  YRAPEV+L   ++ P D+WSVGCI  E+  
Sbjct: 159 ----IKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR 214

Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
            + LF+   +++ L  +   +G  P           E+        +WP       ++  
Sbjct: 215 RKPLFRGSSDVDQLGKILDVIGL-P----------GEE--------DWPR--DV--ALPR 251

Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                +    +   V        DLL   L ++P++R++A  AL+HP+F++L
Sbjct: 252 QAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 303

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  184 bits (468), Expect = 2e-54
 Identities = 94/389 (24%), Positives = 158/389 (40%), Gaps = 82/389 (21%)

Query: 34  GATAAAAKHVSPPRRDDDREGHYV-------FNLGENLTPRYKILSKMGEGTFGRVLECW 86
           G+   +   ++  + +   + + V          GE     Y     +G G+FG V +  
Sbjct: 1   GSFTMSNAPLNGVKLNPLDDPNKVIKVLASDGKTGEQREIAYTNCKVIGNGSFGVVFQAK 60

Query: 87  DRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDKGGSSHC--VQIRNWF----- 137
             ++ E VAIK V      K R     E+ +++ +         H   V ++ +F     
Sbjct: 61  LVESDE-VAIKKVLQDKRFKNR-----ELQIMRIV--------KHPNVVDLKAFFYSNGD 106

Query: 138 -DYRNHICIVFEKLGPSLFDFLKRNKYC--PFPVDLVREFGRQLLESVAYMHDLRLIHTD 194
                 + +V E +  +++   +         P+ L++ +  QLL S+AY+H + + H D
Sbjct: 107 KKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRD 166

Query: 195 LKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS--TAFDNQNHSSIVS 252
           +KP+N+LL                        P S  +KLIDFGS       + + S + 
Sbjct: 167 IKPQNLLLD-----------------------PPSGVLKLIDFGSAKILIAGEPNVSYIC 203

Query: 253 TRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPE 311
           +R+YRAPE+I G   ++   D+WS GC++ EL  G+ LF     ++ L  + + LG    
Sbjct: 204 SRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSR 263

Query: 312 HMIRRAS-RGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
             I+  +    E  F +     + +    R    A+                      DL
Sbjct: 264 EQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAI----------------------DL 301

Query: 371 LHGLLRYDPSERLTARQALNHPFFRNLNE 399
           +  LL Y PS RLTA +AL HPFF  L  
Sbjct: 302 ISRLLEYTPSARLTAIEALCHPFFDELRT 330

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  180 bits (459), Expect = 3e-54
 Identities = 96/354 (27%), Positives = 156/354 (44%), Gaps = 88/354 (24%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----------SIRKYRDAAMIEIDV 115
           +Y+ L K+GEGT+G V +  +R+T E VA+K VR           ++R        EI +
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALR--------EICL 54

Query: 116 LQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
           L+ L         H   V++ +       + +VFE     L  +           ++V+ 
Sbjct: 55  LKEL--------KHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNG-DLDPEIVKS 105

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F  QLL+ + + H   ++H DLKP+N+L+             + +GE           +K
Sbjct: 106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLI-------------NRNGE-----------LK 141

Query: 234 LIDFG-STAF--DNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCT-GEA 288
           L +FG + AF    + +S+ V T  YR P+V+ G   +S   DMWS GCI  EL   G  
Sbjct: 142 LANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRP 201

Query: 289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR----ESIK 344
           LF  ++  + L  + R LG  P          TE+         WP   +++    +   
Sbjct: 202 LFPGNDVDDQLKRIFRLLGT-P----------TEE--------QWPS--MTKLPDYKPYP 240

Query: 345 AVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
                  L N+V     +  +T  DLL  LL+ +P +R++A +AL HP+F +  
Sbjct: 241 MYPATTSLVNVVP----KLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC 290

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  184 bits (468), Expect = 4e-54
 Identities = 91/390 (23%), Positives = 149/390 (38%), Gaps = 82/390 (21%)

Query: 34  GATAAAAKHVSPPRRDDDREGHYV--------FNLGENLTPRYKILSKMGEGTFGRVLEC 85
                        +   D++G  V                  Y     +G G+FG V + 
Sbjct: 14  CKPVQQPSAFGSMKVSRDKDGSKVTTVVATPGQGPDRPQEVSYTDTKVIGNGSFGVVYQA 73

Query: 86  WDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDKGGSSHC--VQIRNWF---- 137
               + E VAIK V      K R     E+ +++ L         HC  V++R +F    
Sbjct: 74  KLCDSGELVAIKKVLQDKRFKNR-----ELQIMRKL--------DHCNIVRLRYFFYSSG 120

Query: 138 --DYRNHICIVFEKLGPSLFDFLKRNKYC--PFPVDLVREFGRQLLESVAYMHDLRLIHT 193
                 ++ +V + +  +++   +         PV  V+ +  QL  S+AY+H   + H 
Sbjct: 121 EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHR 180

Query: 194 DLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS--TAFDNQNHSSIV 251
           D+KP+N+LL                        P ++ +KL DFGS       + + S +
Sbjct: 181 DIKPQNLLLD-----------------------PDTAVLKLCDFGSAKQLVRGEPNVSYI 217

Query: 252 STRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PL 309
            +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L  + + LG P 
Sbjct: 218 CSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPT 277

Query: 310 PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD 369
            E +       TE  F +     W +    R   +A+                       
Sbjct: 278 REQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI----------------------A 315

Query: 370 LLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           L   LL Y P+ RLT  +A  H FF  L +
Sbjct: 316 LCSRLLEYTPTARLTPLEACAHSFFDELRD 345

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  180 bits (459), Expect = 6e-54
 Identities = 97/356 (27%), Positives = 159/356 (44%), Gaps = 86/356 (24%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----------SIRKYRDAAMIEIDVL 116
           ++K L K+G GT+  V +  ++ T   VA+K V+          +IR        EI ++
Sbjct: 6   QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIR--------EISLM 57

Query: 117 QHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLK----RNKYCPFPVDL 170
           + L         H   V++ +     N + +VFE +   L  ++      N      ++L
Sbjct: 58  KEL--------KHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNL 109

Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           V+ F  QLL+ +A+ H+ +++H DLKP+N+L+             +  G+          
Sbjct: 110 VKYFQWQLLQGLAFCHENKILHRDLKPQNLLI-------------NKRGQ---------- 146

Query: 231 AIKLIDFG-STAFDNQNH--SSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTG 286
            +KL DFG + AF    +  SS V T  YRAP+V++G   +S   D+WS GCIL E+ TG
Sbjct: 147 -LKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205

Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR----ES 342
           + LF    + E L ++   +G  P           E          WP   V++      
Sbjct: 206 KPLFPGTNDEEQLKLIFDIMGT-P----------NES--------LWPS--VTKLPKYNP 244

Query: 343 IKAVKKLDRLKNMVSLHVDRARSTL-TDLLHGLLRYDPSERLTARQALNHPFFRNL 397
               +    L+ ++  H          D LHGLL+ +P  RL+A+QAL+HP+F   
Sbjct: 245 NIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEY 300

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  180 bits (458), Expect = 7e-54
 Identities = 96/349 (27%), Positives = 148/349 (42%), Gaps = 79/349 (22%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----------SIRKYRDAAMIEIDV 115
           +Y+ L K+GEGT+G V +  D      VA+K +R           +IR        EI +
Sbjct: 22  KYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIR--------EISL 72

Query: 116 LQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVRE 173
           L+ L         H   V + +       + +VFE +   L   L  NK        ++ 
Sbjct: 73  LKEL--------HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENK-TGLQDSQIKI 123

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           +  QLL  VA+ H  R++H DLKP+N+L+             +S G            +K
Sbjct: 124 YLYQLLRGVAHCHQHRILHRDLKPQNLLI-------------NSDGA-----------LK 159

Query: 234 LIDFG-STAFDNQNH--SSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEAL 289
           L DFG + AF       +  V T  YRAP+V++G   +S   D+WS+GCI  E+ TG+ L
Sbjct: 160 LADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPL 219

Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
           F    + + L  +   LG  P            +         WP         K     
Sbjct: 220 FPGVTDDDQLPKIFSILGT-P----------NPR--------EWP-QVQELPLWKQRTFQ 259

Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
              K   S  +        DLL  +L +DP++R++AR A+NHP+F++L+
Sbjct: 260 VFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  179 bits (456), Expect = 4e-53
 Identities = 95/347 (27%), Positives = 153/347 (44%), Gaps = 75/347 (21%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRD----AAMIEIDVLQHLA 120
           RY+ L  +GEG F  V +  D+ T + VAIK ++     + +D     A+ EI +LQ L 
Sbjct: 11  RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL- 69

Query: 121 KNDKGGSSH--CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                  SH   + + + F ++++I +VF+ +   L   +K N         ++ +    
Sbjct: 70  -------SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNS-LVLTPSHIKAYMLMT 121

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L+ + Y+H   ++H DLKP N+LL               +G            +KL DFG
Sbjct: 122 LQGLEYLHQHWILHRDLKPNNLLL-------------DENGV-----------LKLADFG 157

Query: 239 -STAFD--NQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHE 294
            + +F   N+ ++  V TR YRAPE++ G   +    DMW+VGCIL EL           
Sbjct: 158 LAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDS 217

Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR----ESIKAVKKLD 350
           +L+ L  +   LG  P          TE+         WP+  +       + K+   + 
Sbjct: 218 DLDQLTRIFETLGT-P----------TEE--------QWPD--MCSLPDYVTFKSFPGIP 256

Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
            L ++ S     A   L DL+ GL  ++P  R+TA QAL   +F N 
Sbjct: 257 -LHHIFS----AAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNR 298

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  176 bits (448), Expect = 1e-51
 Identities = 72/351 (20%), Positives = 126/351 (35%), Gaps = 102/351 (29%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI-----EIDVLQHLAK 121
            Y IL ++G G   +V +  +   ++  AIK V    +  D   +     EI  L  L  
Sbjct: 57  IYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVN--LEEADNQTLDSYRNEIAYLNKL-- 111

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
             +  S   +++ ++     +I +V E     L  +LK+ K         + + + +LE+
Sbjct: 112 --QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEA 167

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-ST 240
           V  +H   ++H+DLKP N L+V                            +KLIDFG + 
Sbjct: 168 VHTIHQHGIVHSDLKPANFLIVDGM-------------------------LKLIDFGIAN 202

Query: 241 AFDNQNHS----SIVSTRHYRAPEVILGLGW-----------SYPCDMWSVGCILVELCT 285
                  S    S V   +Y  PE I  +             S   D+WS+GCIL  +  
Sbjct: 203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY 262

Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA 345
           G+  FQ   N   ++ +   + P                      + +P+    ++    
Sbjct: 263 GKTPFQQIIN--QISKLHAIIDP-------------------NHEIEFPDI-PEKD---- 296

Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                L D+L   L+ DP +R++  + L HP+ + 
Sbjct: 297 ---------------------LQDVLKCCLKRDPKQRISIPELLAHPYVQI 326

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  174 bits (443), Expect = 2e-51
 Identities = 77/352 (21%), Positives = 146/352 (41%), Gaps = 71/352 (20%)

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKN 122
                Y+++ K+G G +  V E  +    E+V +K+++ ++K +     EI +L++L   
Sbjct: 33  GNQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLR-- 88

Query: 123 DKGGSSHCVQIRNWF--DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
              G  + + + +           +VFE +  +  DF  +  Y       +R +  ++L+
Sbjct: 89  ---GGPNIITLADIVKDPVSRTPALVFEHVNNT--DF--KQLYQTLTDYDIRFYMYEILK 141

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
           ++ Y H + ++H D+KP N+++                         +   ++LID+G  
Sbjct: 142 ALDYCHSMGIMHRDVKPHNVMID-----------------------HEHRKLRLIDWGLA 178

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTG-EALFQTHENL 296
                 Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +    E  F  H+N 
Sbjct: 179 EFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNY 238

Query: 297 EHLAMMERALG-PLPEHMIRR----ASRGTEKYFRRGSRLNW----PEGAVSRESIKAVK 347
           + L  + + LG       I +              R SR  W            S +A+ 
Sbjct: 239 DQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEAL- 297

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                                D L  LLRYD   RLTAR+A+ HP+F  + +
Sbjct: 298 ---------------------DFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 328

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  174 bits (442), Expect = 5e-51
 Identities = 90/358 (25%), Positives = 146/358 (40%), Gaps = 67/358 (18%)

Query: 57  VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVL 116
                     R+++    G+GTFG V    ++ T   VAIK V    ++      E+ ++
Sbjct: 14  ADERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF---RNRELQIM 70

Query: 117 QHLAKNDKGGSSHC--VQIRNWF-----DYRNHIC--IVFEKLGPSLFDFLKRNKYC--P 165
           Q LA        H   VQ++++F       R  I   +V E +  +L    +        
Sbjct: 71  QDLAVLH-----HPNIVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVA 125

Query: 166 FPVDLVREFGRQLLESVAYMHD--LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF 223
            P  L++ F  QL+ S+  +H   + + H D+KP N+L+                     
Sbjct: 126 PPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLV--------------------- 164

Query: 224 RCLPKSSAIKLIDFGS--TAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCIL 280
                   +KL DFGS      ++ + + + +R+YRAPE+I G   ++   D+WSVGCI 
Sbjct: 165 --NEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIF 222

Query: 281 VELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAVS 339
            E+  GE +F+   +   L  + R LG P  E + +     T+        + W      
Sbjct: 223 AEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPW------ 276

Query: 340 RESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                         N+ S H  +      DLL  LL+Y P ER+   +AL HP+F  L
Sbjct: 277 -------------SNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFDEL 321

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  172 bits (437), Expect = 8e-51
 Identities = 64/334 (19%), Positives = 107/334 (32%), Gaps = 87/334 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDVLQHLAKND 123
            ++ LS++G G++G V +   ++     A+K   S     K R   + E+   + + ++ 
Sbjct: 58  SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                 CV++   ++    + +  E  GPSL    +       P   V  + R  L ++A
Sbjct: 118 -----CCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWG-ASLPEAQVWGYLRDTLLALA 171

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           ++H   L+H D+KP NI L                G             KL DFG     
Sbjct: 172 HLHSQGLVHLDVKPANIFL-------------GPRGR-----------CKLGDFGLLVEL 207

Query: 243 DNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
                         Y APE++ G  +    D++S+G  ++E+     L    E  + L  
Sbjct: 208 GTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEGWQQL-R 265

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
                      +                         S E                    
Sbjct: 266 QGYLPPEFTAGL-------------------------SSE-------------------- 280

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                L  +L  +L  DP  R TA   L  P  R
Sbjct: 281 -----LRSVLVMMLEPDPKLRATAEALLALPVLR 309

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score =  172 bits (437), Expect = 4e-50
 Identities = 88/376 (23%), Positives = 154/376 (40%), Gaps = 90/376 (23%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHL 119
           E  + +Y +   +G G+FG V E +D ++ +R A+K V      K R     E+D+++ L
Sbjct: 3   ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNR-----ELDIMKVL 57

Query: 120 --------------------------------AKNDKGGSSHCVQIRNWFDYRNHICIVF 147
                                              + G ++H   +        ++ ++ 
Sbjct: 58  DHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIM 117

Query: 148 EKLGPSLFDFLKRNKYC--PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSS 205
           E +  +L   LK         P++L+  +  QL  +V ++H L + H D+KP+N+L+   
Sbjct: 118 EYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN-- 175

Query: 206 EFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS--TAFDNQNHSSIVSTRHYRAPEVIL 263
                                 K + +KL DFGS      ++   + + +R YRAPE++L
Sbjct: 176 ---------------------SKDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPELML 214

Query: 264 G-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGT 321
           G   ++   D+WS+GC+  EL  G+ LF    +++ L  + + +G P  E MIR     T
Sbjct: 215 GATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYT 274

Query: 322 EKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE 381
           E  F      +W +         A+                      DLL  +LRY+P  
Sbjct: 275 EVRFPTLKAKDWRKILPEGTPSLAI----------------------DLLEQILRYEPDL 312

Query: 382 RLTARQALNHPFFRNL 397
           R+   +A+ HPFF +L
Sbjct: 313 RINPYEAMAHPFFDHL 328

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  167 bits (425), Expect = 5e-49
 Identities = 60/347 (17%), Positives = 110/347 (31%), Gaps = 69/347 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDK 124
            + +   +G+G    V     ++T +  AIKV    S  +  D  M E +VL+ L     
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL----- 64

Query: 125 GGSSH--CVQIRNWFDYRN--HICIVFEKL-GPSLFDFL-KRNKYCPFPVDLVREFGRQL 178
              +H   V++    +     H  ++ E     SL+  L + +     P        R +
Sbjct: 65  ---NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           +  + ++ +  ++H ++KP NI+ V  E                       S  KL DFG
Sbjct: 122 VGGMNHLRENGIVHRNIKPGNIMRVIGE--------------------DGQSVYKLTDFG 161

Query: 239 -STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP--------CDMWSVGCILVELCTGEA 288
            +   ++     S+  T  Y  P++                  D+WS+G       TG  
Sbjct: 162 AARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSL 221

Query: 289 LFQTHENLEHLA-MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            F+  E       +M + +   P   I      +         ++W        S+    
Sbjct: 222 PFRPFEGPRRNKEVMYKIITGKPSGAI------SGVQKAENGPIDWSGDMPVSCSLS--- 272

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                           +  LT +L  +L  D  +     Q       
Sbjct: 273 -------------RGLQVLLTPVLANILEADQEKCWGFDQFFAETSD 306

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  170 bits (433), Expect = 1e-48
 Identities = 85/353 (24%), Positives = 148/353 (41%), Gaps = 83/353 (23%)

Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
           G +V +     + RYK    +G+G+FG V+ C D+ T +  A+KV+  R +++  D   +
Sbjct: 14  GMFVQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESL 73

Query: 112 --EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPV 168
             E+ +L+ L         + +++  +F+ + +  +V E   G  LFD +   K   F  
Sbjct: 74  LREVQLLKQL------DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSE 125

Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
                  RQ+L  + YMH  +++H DLKPEN+LL S                       K
Sbjct: 126 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKS---------------------K 164

Query: 229 SSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
            + I++IDFG +     ++     + T +Y APEV+ G  +   CD+WS G IL  L +G
Sbjct: 165 DANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSG 223

Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
              F      +               ++++  +G   +        W +  VS  +    
Sbjct: 224 CPPFNGANEYD---------------ILKKVEKGKYTF----ELPQWKK--VSESAK--- 259

Query: 347 KKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                                 DL+  +L Y PS R++AR AL+H + +   +
Sbjct: 260 ----------------------DLIRKMLTYVPSMRISARDALDHEWIQTYTK 290

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  169 bits (429), Expect = 6e-48
 Identities = 84/349 (24%), Positives = 148/349 (42%), Gaps = 82/349 (23%)

Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI 111
           G ++ +   +L+  Y+ + K+G G +G VL C D+ T    AIK++   S+    ++ ++
Sbjct: 25  GMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLL 84

Query: 112 -EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVD 169
            E+ VL+ L         + +++ ++F+ + +  +V E   G  LFD +       F   
Sbjct: 85  EEVAVLKLL------DHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMK--FNEV 136

Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
                 +Q+L  V Y+H   ++H DLKPEN+LL S E                     K 
Sbjct: 137 DAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKE---------------------KD 175

Query: 230 SAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           + IK++DFG +A   + +     + T +Y APEV+    +   CD+WS+G IL  L  G 
Sbjct: 176 ALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGY 234

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
             F    + E               ++R+  +G   +        W    VS  +     
Sbjct: 235 PPFGGQTDQE---------------ILRKVEKGKYTF----DSPEWKN--VSEGAK---- 269

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                DL+  +L++D   R++A+QAL HP+ + 
Sbjct: 270 ---------------------DLIKQMLQFDSQRRISAQQALEHPWIKE 297

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  165 bits (420), Expect = 6e-48
 Identities = 75/343 (21%), Positives = 132/343 (38%), Gaps = 79/343 (23%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
              T  Y++   +G G++     C  + T    A+K+   I K +     EI++L    +
Sbjct: 18  IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKI---IDKSKRDPTEEIEILLRYGQ 74

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           +      + + +++ +D   ++ +V E + G  L D + R K+  F           + +
Sbjct: 75  HP-----NIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITK 127

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
           +V Y+H   ++H DLKP NIL V                           +I++ DFG +
Sbjct: 128 TVEYLHAQGVVHRDLKPSNILYVDES--------------------GNPESIRICDFGFA 167

Query: 240 TAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +N    +   T ++ APEV+   G+   CD+WS+G +L  + TG   F    +  
Sbjct: 168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT 227

Query: 298 HLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
              ++ R         I        K+    G    W    VS                 
Sbjct: 228 PEEILAR---------IGSG-----KFSLSGG---YWNS--VS----------------- 251

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
               D A+    DL+  +L  DP +RLTA   L HP+  + ++
Sbjct: 252 ----DTAK----DLVSKMLHVDPHQRLTAALVLRHPWIVHWDQ 286

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  164 bits (417), Expect = 2e-47
 Identities = 85/361 (23%), Positives = 145/361 (40%), Gaps = 92/361 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----------SIRKYRDAAMIEIDV 115
           +Y+ L+K+G+GTFG V +   R+T ++VA+K V            ++R        EI +
Sbjct: 18  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALR--------EIKI 69

Query: 116 LQHLAKNDKGGSSH----------CVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
           LQ L         H            +   +   +  I +VF+     L   L  N    
Sbjct: 70  LQLL--------KHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLL-SNVLVK 120

Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
           F +  ++   + LL  + Y+H  +++H D+K  N+L+             +  G      
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI-------------TRDGV----- 162

Query: 226 LPKSSAIKLIDFG-STAFD------NQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVG 277
                 +KL DFG + AF          +++ V T  YR PE++LG   +  P D+W  G
Sbjct: 163 ------LKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAG 216

Query: 278 CILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGA 337
           CI+ E+ T   + Q +     LA++ +  G             T +         WP   
Sbjct: 217 CIMAEMWTRSPIMQGNTEQHQLALISQLCGS-I----------TPEV--------WP-NV 256

Query: 338 VSRESIKAVKKLDRLKNMVSLHVDRARSTLT--DLLHGLLRYDPSERLTARQALNHPFFR 395
            + E  + ++ +   K  V   +          DL+  LL  DP++R+ +  ALNH FF 
Sbjct: 257 DNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFW 316

Query: 396 N 396
           +
Sbjct: 317 S 317

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  167 bits (424), Expect = 3e-47
 Identities = 93/349 (26%), Positives = 143/349 (40%), Gaps = 82/349 (23%)

Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI- 111
           G            RY I+  +G+G+FG VL+C DR TQ+  A+KV+ ++  K +D + I 
Sbjct: 10  GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL 69

Query: 112 -EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVD 169
            E+++L+ L         + +++    +  +   IV E   G  LFD + + K   F   
Sbjct: 70  REVELLKKL------DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEH 121

Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
                 +Q+   + YMH   ++H DLKPENILL S E                     K 
Sbjct: 122 DAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE---------------------KD 160

Query: 230 SAIKLIDFG-STAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
             IK+IDFG ST F  N      + T +Y APEV+ G  +   CD+WS G IL  L +G 
Sbjct: 161 CDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGT 219

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
             F      +               +++R   G   +        W    +S ++     
Sbjct: 220 PPFYGKNEYD---------------ILKRVETGKYAF----DLPQWRT--ISDDAK---- 254

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                DL+  +L + PS R+TA Q L HP+ + 
Sbjct: 255 ---------------------DLIRKMLTFHPSLRITATQCLEHPWIQK 282

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  161 bits (410), Expect = 4e-47
 Identities = 59/343 (17%), Positives = 101/343 (29%), Gaps = 94/343 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL------- 119
            +K +  +G G FG+V +   R   +   IK    ++   + A  E+  L  L       
Sbjct: 12  DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKR---VKYNNEKAEREVKALAKLDHVNIVH 68

Query: 120 ---AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFG 175
                +            +       + I  E     +L  ++++ +       L  E  
Sbjct: 69  YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
            Q+ + V Y+H  +LI+ DLKP NI LV                         +  +K+ 
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLV------------------------DTKQVKIG 164

Query: 236 DFG-STAFDN-QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
           DFG  T+  N    +    T  Y +PE I    +    D++++G IL EL     +  T 
Sbjct: 165 DFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH---VCDTA 221

Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
                     R  G + +                            ++            
Sbjct: 222 FETSKFFTDLRD-GIISDI-------------------------FDKK------------ 243

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                           LL  LL   P +R    + L       
Sbjct: 244 -------------EKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  161 bits (409), Expect = 2e-46
 Identities = 74/413 (17%), Positives = 130/413 (31%), Gaps = 130/413 (31%)

Query: 42  HVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR- 100
           H            ++       L  +Y +   +G+G++G V    + QT+   AIK++  
Sbjct: 2   HHHHHHSSGRENLYFQGGSLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNK 61

Query: 101 -----SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSL 154
                   K  +    E+ +++ L         +  ++   ++   +IC+V E   G  L
Sbjct: 62  NKIRQINPKDVERIKTEVRLMKKLH------HPNIARLYEVYEDEQYICLVMELCHGGHL 115

Query: 155 FDFLKRNKY--------------------------------------CPFPVDLVREFGR 176
            D L                                                 L+    R
Sbjct: 116 LDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMR 175

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+  ++ Y+H+  + H D+KPEN L  +++                      S  IKL+D
Sbjct: 176 QIFSALHYLHNQGICHRDIKPENFLFSTNK----------------------SFEIKLVD 213

Query: 237 FG-STAFDNQNH------SSIVSTRHYRAPEVILGLGWSY--PCDMWSVGCILVELCTGE 287
           FG S  F   N+      ++   T ++ APEV+     SY   CD WS G +L  L  G 
Sbjct: 214 FGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGA 273

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKAV 346
             F    N      + +         +        K  F   +   +    +S  +   +
Sbjct: 274 VPFP-GVN--DADTISQ---------VLNK-----KLCFENPN---YNV--LSPLARDLL 311

Query: 347 KKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                                      LL  +  ER  A +AL HP+    ++
Sbjct: 312 SN-------------------------LLNRNVDERFDAMRALQHPWISQFSD 339

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score =  164 bits (416), Expect = 3e-46
 Identities = 86/394 (21%), Positives = 157/394 (39%), Gaps = 61/394 (15%)

Query: 20  SEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGEN---LTPRYKILSKMGE 76
            + +         +   +  AKH +  +   D +  Y   +G++   +  RY+ L  +G 
Sbjct: 14  LDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQ-FYSVEVGDSTFTVLKRYQNLKPIGS 72

Query: 77  GTFGRVLECWDRQTQERVAIKVVRSI--------RKYRDAAMIEIDVLQHLAKNDKGGSS 128
           G  G V   +D      VAIK +           R YR     E+ +++ +   +     
Sbjct: 73  GAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYR-----ELVLMKCVNHKNIISLL 127

Query: 129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
           +    +   +    + +V E +  +L   ++         + +     Q+L  + ++H  
Sbjct: 128 NVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSA 183

Query: 189 RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQN 246
            +IH DLKP NI++ S                    C      +K++DFG   TA  +  
Sbjct: 184 GIIHRDLKPSNIVVKSD-------------------CT-----LKILDFGLARTAGTSFM 219

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL 306
            +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + LF   + ++    +   L
Sbjct: 220 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 279

Query: 307 GPLPEHMIRRASRGTEKYFRR---GSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA 363
           G      +++       Y       + L +P+         A  + ++LK   +      
Sbjct: 280 GTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK-LFPDSLFPADSEHNKLKASQAR----- 333

Query: 364 RSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                DLL  +L  DP++R++   AL HP+    
Sbjct: 334 -----DLLSKMLVIDPAKRISVDDALQHPYINVW 362

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  159 bits (404), Expect = 3e-46
 Identities = 60/345 (17%), Positives = 113/345 (32%), Gaps = 70/345 (20%)

Query: 59  NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDV 115
            +    T  +  L K+G G FG V +C  R      AIK  +   +       A+ E+  
Sbjct: 4   GMKSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYA 63

Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVR 172
              L +      SH V+  + +   +H+ I  E   G SL D +  N      F    ++
Sbjct: 64  HAVLGQ-----HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 118

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
           +   Q+   + Y+H + L+H D+KP NI +  +        +         + +      
Sbjct: 119 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVM-----F 173

Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQ 291
           K+ D G     + +         + A EV+          D++++   +V     E L +
Sbjct: 174 KIGDLGHVTRIS-SPQVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPR 232

Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
             +    +   +  L  +P+ +                         S+E          
Sbjct: 233 NGDQWHEI--RQGRLPRIPQVL-------------------------SQE---------- 255

Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                           T+LL  ++  DP  R +A   + H    +
Sbjct: 256 ---------------FTELLKVMIHPDPERRPSAMALVKHSVLLS 285

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  161 bits (408), Expect = 4e-46
 Identities = 68/341 (19%), Positives = 130/341 (38%), Gaps = 94/341 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKND 123
           +Y  L K+GEG+FG+ +     +   +  IK +   R   K R+ +  E+ VL ++    
Sbjct: 25  KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANM---- 80

Query: 124 KGGSSHC--VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                H   VQ R  F+    + IV +   G  LF  +   K   F  D + ++  Q+  
Sbjct: 81  ----KHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICL 136

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
           ++ ++HD +++H D+K +NI                         L K   ++L DFG +
Sbjct: 137 ALKHVHDRKILHRDIKSQNIF------------------------LTKDGTVQLGDFGIA 172

Query: 240 TAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
              ++      + + T +Y +PE+     ++   D+W++GC+L ELCT +  F+   +++
Sbjct: 173 RVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA-GSMK 231

Query: 298 HLAM--MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           +L +  +  +  P+  H                          S +              
Sbjct: 232 NLVLKIISGSFPPVSLHY-------------------------SYD-------------- 252

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                      L  L+  L + +P +R +    L   F   
Sbjct: 253 -----------LRSLVSQLFKRNPRDRPSVNSILEKGFIAK 282

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  159 bits (403), Expect = 6e-46
 Identities = 65/358 (18%), Positives = 124/358 (34%), Gaps = 99/358 (27%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-------A 120
           ++ ++ +G+G FG+V++  +       AIK +R   +     + E+ +L  L        
Sbjct: 8   FEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRY 67

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                   + V+       ++ + I  E     +L+D +          D      RQ+L
Sbjct: 68  YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSEN-LNQQRDEYWRLFRQIL 126

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           E+++Y+H   +IH DLKP NI +                         +S  +K+ DFG 
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFID------------------------ESRNVKIGDFGL 162

Query: 239 STAFDNQ----------------NHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILV 281
           +                      N +S + T  Y A EV+ G G  +   DM+S+G I  
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222

Query: 282 ELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRE 341
           E+      F T     ++  +++         +R  S            + +P      +
Sbjct: 223 EMIYP---FSTGMERVNI--LKK---------LRSVS------------IEFPPDFDDNK 256

Query: 342 SIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                                       ++  L+ +DP++R  AR  LN  +    ++
Sbjct: 257 M----------------------KVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQ 292

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  158 bits (402), Expect = 2e-45
 Identities = 78/342 (22%), Positives = 138/342 (40%), Gaps = 78/342 (22%)

Query: 63  NLTPRYKILS---KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL 119
                Y +      +GEG+F    +C  +++ +  A+K++   ++       EI  L+  
Sbjct: 5   PFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIIS--KRMEANTQKEITALKLC 62

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                 G  + V++   F  + H  +V E L G  LF+ +K+ K+  F         R+L
Sbjct: 63  -----EGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKL 115

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           + +V++MHD+ ++H DLKPEN+L                           +  IK+IDFG
Sbjct: 116 VSAVSHMHDVGVVHRDLKPENLLFTDEN---------------------DNLEIKIIDFG 154

Query: 239 -STAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
            +      N    +   T HY APE++   G+   CD+WS+G IL  + +G+  FQ+H+ 
Sbjct: 155 FARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHD- 213

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
                            ++++  +G   + F       W    VS +  K          
Sbjct: 214 -------RSLTCTSAVEIMKKIKKG--DFSFEGE---AWKN--VS-QEAK---------- 248

Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                         DL+ GLL  DP++RL       + + ++
Sbjct: 249 --------------DLIQGLLTVDPNKRLKMSGLRYNEWLQD 276

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  162 bits (412), Expect = 2e-45
 Identities = 75/355 (21%), Positives = 136/355 (38%), Gaps = 93/355 (26%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--------------SIRKYRD 107
             +   Y  + K+G G +G VL C ++      AIKV++              +I K+ +
Sbjct: 32  GKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHE 91

Query: 108 AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPF 166
               EI +L+ L         + +++ + F+ + +  +V E   G  LF+ +       F
Sbjct: 92  EIYNEISLLKSL------DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--F 143

Query: 167 PVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL 226
                    +Q+L  + Y+H   ++H D+KPENILL +                      
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKN-------------------- 183

Query: 227 PKSSAIKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
                IK++DFG S+ F  +      + T +Y APEV+    ++  CD+WS G I+  L 
Sbjct: 184 -SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILL 241

Query: 285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIK 344
            G   F    + +               +I++  +G   +       +W    +S E+  
Sbjct: 242 CGYPPFGGQNDQD---------------IIKKVEKGKYYF----DFNDWKN--ISDEAK- 279

Query: 345 AVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                                   +L+  +L YD ++R TA +ALN  + +    
Sbjct: 280 ------------------------ELIKLMLTYDYNKRCTAEEALNSRWIKKYAN 310

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  160 bits (405), Expect = 2e-45
 Identities = 58/342 (16%), Positives = 106/342 (30%), Gaps = 65/342 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDK 124
            + +   +G+G    V     ++T +  AIKV    S  +  D  M E +VL+ L     
Sbjct: 10  LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN---- 65

Query: 125 GGSSHCVQIRNWFDYRN--HICIVFEKL-GPSLFDFL-KRNKYCPFPVDLVREFGRQLLE 180
               + V++    +     H  ++ E     SL+  L + +     P        R ++ 
Sbjct: 66  --HKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVG 123

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
            + ++ +  ++H ++KP NI+ V  E                       S  KL DFG +
Sbjct: 124 GMNHLRENGIVHRNIKPGNIMRVIGE--------------------DGQSVYKLTDFGAA 163

Query: 240 TAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP--------CDMWSVGCILVELCTGEALF 290
              ++     S+  T  Y  P++                  D+WS+G       TG   F
Sbjct: 164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223

Query: 291 QTHENLEHLA-MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
           +  E       +M + +   P   I    +           +                  
Sbjct: 224 RPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVS--------------- 268

Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
             L           +  LT +L  +L  D  +     Q    
Sbjct: 269 CSLS-------RGLQVLLTPVLANILEADQEKCWGFDQFFAE 303

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score =  155 bits (395), Expect = 2e-44
 Identities = 83/356 (23%), Positives = 134/356 (37%), Gaps = 72/356 (20%)

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK------VVRSIRKYRDAAMIEIDVL 116
           +L  RY  L  +G G  G V    D    +RVAIK              R     EI ++
Sbjct: 8   DLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALR-----EIKII 62

Query: 117 QHLA-KN-------DKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPV 168
           + L   N            S            N + IV E +   L + L++    P   
Sbjct: 63  RRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLE 119

Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
           +  R F  QLL  + Y+H   ++H DLKP N+ + + +                   +  
Sbjct: 120 EHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTED------------------LV-- 159

Query: 229 SSAIKLIDFG--STAFDNQNHSSI----VSTRHYRAPEVILGL-GWSYPCDMWSVGCILV 281
              +K+ DFG       + +H       + T+ YR+P ++L    ++   DMW+ GCI  
Sbjct: 160 ---LKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 216

Query: 282 ELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRE 341
           E+ TG+ LF     LE + ++  ++  + E   +        Y R               
Sbjct: 217 EMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMT----------- 265

Query: 342 SIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
             +  K L +L   +S     A     D L  +L + P +RLTA +AL+HP+    
Sbjct: 266 --EPHKPLTQLLPGIS---REAV----DFLEQILTFSPMDRLTAEEALSHPYMSIY 312

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score =  157 bits (398), Expect = 2e-44
 Identities = 84/366 (22%), Positives = 149/366 (40%), Gaps = 60/366 (16%)

Query: 48  RDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK------- 97
           R       Y   +G++   +  RY+ L  +G G  G V   +D   +  VAIK       
Sbjct: 4   RSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ 63

Query: 98  -VVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFD 156
               + R YR     E+ +++ +   +  G  +    +   +    + IV E +  +L  
Sbjct: 64  NQTHAKRAYR-----ELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQ 118

Query: 157 FLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS 216
            ++         + +     Q+L  + ++H   +IH DLKP NI++ S            
Sbjct: 119 VIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSD----------- 163

Query: 217 SSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMW 274
                   C      +K++DFG   TA  +   +  V TR+YRAPEVILG+G+    D+W
Sbjct: 164 --------C-----TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIW 210

Query: 275 SVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR---GSRL 331
           SVGCI+ E+  G  LF   ++++    +   LG      +++       Y       +  
Sbjct: 211 SVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGY 270

Query: 332 NWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
           ++ +         A  + ++LK   +           DLL  +L  D S+R++  +AL H
Sbjct: 271 SFEK-LFPDVLFPADSEHNKLKASQAR----------DLLSKMLVIDASKRISVDEALQH 319

Query: 392 PFFRNL 397
           P+    
Sbjct: 320 PYINVW 325

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  158 bits (401), Expect = 2e-44
 Identities = 90/363 (24%), Positives = 144/363 (39%), Gaps = 94/363 (25%)

Query: 51  DREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIR 103
           D          + L   Y +   +G G  G V   ++R+T ++VAI+++        S R
Sbjct: 120 DLTVDDQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAR 179

Query: 104 KYRDAAMI--EIDVLQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFL 158
           +   A  +  EI++L+ L        +H   ++I+N+FD      IV E + G  LFD +
Sbjct: 180 EADPALNVETEIEILKKL--------NHPCIIKIKNFFD-AEDYYIVLELMEGGELFDKV 230

Query: 159 KRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS 218
             NK         + +  Q+L +V Y+H+  +IH DLKPEN+LL S E            
Sbjct: 231 VGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------------ 276

Query: 219 GEMPFRCLPKSSAIKLIDFG-STAFDNQNH-SSIVSTRHYRAPEVILGL---GWSYPCDM 273
                    +   IK+ DFG S      +   ++  T  Y APEV++ +   G++   D 
Sbjct: 277 ---------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDC 327

Query: 274 WSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW 333
           WS+G IL    +G   F  H                   +  + + G   +        W
Sbjct: 328 WSLGVILFICLSGYPPFSEHRT--------------QVSLKDQITSGKYNF----IPEVW 369

Query: 334 PEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
            E  VS                     ++A     DL+  LL  DP  R T  +AL HP+
Sbjct: 370 AE--VS---------------------EKAL----DLVKKLLVVDPKARFTTEEALRHPW 402

Query: 394 FRN 396
            ++
Sbjct: 403 LQD 405

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304

 Score =  155 bits (393), Expect = 2e-44
 Identities = 77/343 (22%), Positives = 125/343 (36%), Gaps = 88/343 (25%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHL 119
            N+   +  +  +G G F  V     R T +  A+K ++        + +  EI VL+ +
Sbjct: 5   TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKK-SPAFRDSSLENEIAVLKKI 63

Query: 120 AKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
                    H   V + + ++   H  +V + + G  LFD +       +         +
Sbjct: 64  --------KHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQ 113

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+L +V Y+H+  ++H DLKPEN+L ++ E                     ++S I + D
Sbjct: 114 QVLSAVKYLHENGIVHRDLKPENLLYLTPE---------------------ENSKIMITD 152

Query: 237 FG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-VELCTGEALFQTHE 294
           FG S    N   S+   T  Y APEV+    +S   D WS+G I  + LC G   F   E
Sbjct: 153 FGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLC-GYPPFYE-E 210

Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
               L              I+        Y F       W +  +S  +   +  L    
Sbjct: 211 TESKLF-----------EKIKEG-----YYEFESP---FWDD--ISESAKDFICHL---- 245

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
               L  D                 P+ER T  +AL+HP+   
Sbjct: 246 ----LEKD-----------------PNERYTCEKALSHPWIDG 267

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  155 bits (394), Expect = 2e-44
 Identities = 75/353 (21%), Positives = 128/353 (36%), Gaps = 79/353 (22%)

Query: 63  NLTPRYKILSKM-GEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMIEIDVLQHLA 120
                Y++   + GEG   RV  C +  T +  A+K++ +     R     E+++L    
Sbjct: 9   RFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ 68

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                G  + +++  +F+  +   +VFEK+ G S+   + + ++  F         + + 
Sbjct: 69  -----GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVA 121

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
            ++ ++H+  + H DLKPENIL                          + S +K+ DF  
Sbjct: 122 SALDFLHNKGIAHRDLKPENILCEHPN---------------------QVSPVKICDFDL 160

Query: 239 STAFDNQNHSSIVSTR---------HYRAPEVILGLGW---SY--PCDMWSVGCILVELC 284
            +        S +ST           Y APEV+         Y   CD+WS+G IL  L 
Sbjct: 161 GSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILL 220

Query: 285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESI 343
           +G   F      +       A       +      G  KY F      +W    +S  + 
Sbjct: 221 SGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEG--KYEFPDK---DWAH--IS-CAA 272

Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
           K                        DL+  LL  D  +RL+A Q L HP+ + 
Sbjct: 273 K------------------------DLISKLLVRDAKQRLSAAQVLQHPWVQG 301

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  155 bits (395), Expect = 2e-44
 Identities = 84/343 (24%), Positives = 134/343 (39%), Gaps = 81/343 (23%)

Query: 62  ENLTPRYKILSKM-GEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
             +T  Y++  ++ G G  G+VLEC+ R+T ++ A+K+   +     A   E+D     +
Sbjct: 24  YAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKL---LYDSPKARQ-EVDHHWQAS 79

Query: 121 KNDKGGSSHCVQIRNWFD----YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFG 175
                   H V I + ++     +  + I+ E + G  LF  ++      F      E  
Sbjct: 80  GGP-----HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIM 134

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           R +  ++ ++H   + H D+KPEN+L  S E                     K + +KL 
Sbjct: 135 RDIGTAIQFLHSHNIAHRDVKPENLLYTSKE---------------------KDAVLKLT 173

Query: 236 DFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           DFG +         +   T +Y APEV+    +   CDMWS+G I+  L  G   F ++ 
Sbjct: 174 DFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNT 233

Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
                         +   M RR   G  +Y F       W E  VS E  K         
Sbjct: 234 GQA-----------ISPGMKRRIRLG--QYGFPNP---EWSE--VS-EDAK--------- 265

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                           L+  LL+ DP+ERLT  Q +NHP+   
Sbjct: 266 ---------------QLIRLLLKTDPTERLTITQFMNHPWINQ 293

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  158 bits (400), Expect = 3e-44
 Identities = 70/362 (19%), Positives = 130/362 (35%), Gaps = 86/362 (23%)

Query: 59  NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQH 118
           N  ++L         +G G+ G V+          VA+K +     + D A++EI +L  
Sbjct: 8   NFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRML--IDFCDIALMEIKLLTE 64

Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG--- 175
                     + ++          + I  E    +L D ++        + L +E+    
Sbjct: 65  SD-----DHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPIS 119

Query: 176 --RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
             RQ+   VA++H L++IH DLKP+NIL+ +           SS      +   ++  I 
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVST-----------SSRFTADQQTGAENLRIL 168

Query: 234 LIDFG-STAFDNQNHSSIVSTRH------YRAPEVILGLGW-------SYPCDMWSVGCI 279
           + DFG     D+   S   +  +      +RAPE++            +   D++S+GC+
Sbjct: 169 ISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228

Query: 280 L-VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAV 338
               L  G+  F                                            + + 
Sbjct: 229 FYYILSKGKHPF------------------------------------------GDKYSR 246

Query: 339 SRESIKAVKKLDRLKNMVSLHV-DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
               I+ +  LD +K +    +   A     DL+  ++ +DP +R TA + L HP F   
Sbjct: 247 ESNIIRGIFSLDEMKCLHDRSLIAEAT----DLISQMIDHDPLKRPTAMKVLRHPLFWPK 302

Query: 398 NE 399
           ++
Sbjct: 303 SK 304

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score =  155 bits (395), Expect = 5e-44
 Identities = 92/364 (25%), Positives = 151/364 (41%), Gaps = 62/364 (17%)

Query: 44  SPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK------ 97
           SPP          V      +   Y+ L  +G G +G V    D +T  +VAIK      
Sbjct: 3   SPPPARSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPF 62

Query: 98  --VVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLF 155
              + + R YR     E+ +L+H+   +  G           D      +V   +G  L 
Sbjct: 63  QSELFAKRAYR-----ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLG 117

Query: 156 DFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR 215
             +K         D ++    Q+L+ + Y+H   +IH DLKP N+ +             
Sbjct: 118 KLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNED---------- 164

Query: 216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMW 274
                    C      +K++DFG     +   +  V TR YRAPEVIL    ++   D+W
Sbjct: 165 ---------CE-----LKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIW 210

Query: 275 SVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNW 333
           SVGCI+ E+ TG+ LF+  ++L+ L  + +  G P  E + R  S   + Y +       
Sbjct: 211 SVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMK------- 263

Query: 334 PEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                    +  ++K D   ++++     A     +LL  +L  D  +R+TA +AL HP+
Sbjct: 264 --------GLPELEKKD-FASILT----NASPLAVNLLEKMLVLDAEQRVTAGEALAHPY 310

Query: 394 FRNL 397
           F +L
Sbjct: 311 FESL 314

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score =  155 bits (394), Expect = 6e-44
 Identities = 94/365 (25%), Positives = 153/365 (41%), Gaps = 65/365 (17%)

Query: 46  PRRDDDREGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI 102
                +R   Y   L +    +  RY+ LS +G G +G V   +D +T  RVA+K +   
Sbjct: 6   HHHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 65

Query: 103 --------RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSL 154
                   R YR     E+ +L+H+   +  G           +  N + +V   +G  L
Sbjct: 66  FQSIIHAKRTYR-----ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADL 120

Query: 155 FDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK 214
            + +K  K      D V+    Q+L  + Y+H   +IH DLKP N+ +            
Sbjct: 121 NNIVKCQKLTD---DHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNED--------- 168

Query: 215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDM 273
                     C      +K++DFG         +  V+TR YRAPE++L    ++   D+
Sbjct: 169 ----------CE-----LKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDI 213

Query: 274 WSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLN 332
           WSVGCI+ EL TG  LF   ++++ L ++ R +G P  E + + +S     Y +      
Sbjct: 214 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ------ 267

Query: 333 WPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHP 392
                    S+  + K++   N+       A     DLL  +L  D  +R+TA QAL H 
Sbjct: 268 ---------SLTQMPKMN-FANVFIGANPLAV----DLLEKMLVLDSDKRITAAQALAHA 313

Query: 393 FFRNL 397
           +F   
Sbjct: 314 YFAQY 318

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score =  153 bits (390), Expect = 2e-43
 Identities = 87/359 (24%), Positives = 146/359 (40%), Gaps = 66/359 (18%)

Query: 52  REGHYVFNLGENL---TPRYKILSKMGEGTFGRVLECWDRQTQERVAIK--------VVR 100
           ++G Y  ++ +        Y   + +G G +G V    D+++ E+VAIK         + 
Sbjct: 7   KKGFYKQDVNKTAWELPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIF 66

Query: 101 SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKR 160
           + R YR     E+ +L+H+   +  G        +         +V   +   L   +  
Sbjct: 67  AKRAYR-----ELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGL 121

Query: 161 NKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE 220
                F  + ++    Q+L+ + Y+H   ++H DLKP N+ +                  
Sbjct: 122 ----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNED--------------- 162

Query: 221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCI 279
               C      +K++DFG     +   +  V TR YRAPEVIL     +   D+WSVGCI
Sbjct: 163 ----CE-----LKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCI 213

Query: 280 LVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWPEGAV 338
           + E+ TG+ LF+  + L+ L  + +  G P  E + +   +  + Y +            
Sbjct: 214 MAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQ------------ 261

Query: 339 SRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
              S+    + D    +      RA     DLL  +L  D  +RLTA QAL HPFF   
Sbjct: 262 ---SLPQTPRKD-FTQLFP----RASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPF 312

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score =  153 bits (390), Expect = 2e-43
 Identities = 90/363 (24%), Positives = 141/363 (38%), Gaps = 72/363 (19%)

Query: 52  REGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI 111
                V     ++ PRY  LS +GEG +G V   +D   + RVAIK +            
Sbjct: 13  AGPEMVRGQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRT 72

Query: 112 --EIDVLQHLAKNDKGGSSH--CVQIRNWF-----DYRNHICIVFEKLGPSLFDFLKRNK 162
             EI +L            H   + I +       +    + IV + +   L+  LK   
Sbjct: 73  LREIKILLRF--------RHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ- 123

Query: 163 YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP 222
                 D +  F  Q+L  + Y+H   ++H DLKP N+LL ++                 
Sbjct: 124 --HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT----------------- 164

Query: 223 FRCLPKSSAIKLIDFG--STAFDNQNHSSI----VSTRHYRAPEVILGL-GWSYPCDMWS 275
             C      +K+ DFG    A  + +H+      V+TR YRAPE++L   G++   D+WS
Sbjct: 165 --C-----DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217

Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRRGSRLNWP 334
           VGCIL E+ +   +F     L+ L  +   LG P  E +    +     Y          
Sbjct: 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL-------- 269

Query: 335 EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
                  S+    K+     +       A S   DLL  +L ++P +R+   QAL HP+ 
Sbjct: 270 -------SLPHKNKVP-WNRLFP----NADSKALDLLDKMLTFNPHKRIEVEQALAHPYL 317

Query: 395 RNL 397
              
Sbjct: 318 EQY 320

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  153 bits (389), Expect = 3e-43
 Identities = 76/355 (21%), Positives = 128/355 (36%), Gaps = 104/355 (29%)

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMI--EIDVL 116
                Y++   +G+G F  V  C +R+T ++ A+K+V     +         +  E  + 
Sbjct: 21  LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80

Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFL--KRNKYCPFPVDLVRE 173
             L         H V++   +     + +VFE + G  L   +  + +    +   +   
Sbjct: 81  HML------KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASH 134

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           + RQ+LE++ Y HD  +IH D+KP  +LL S E                      S+ +K
Sbjct: 135 YMRQILEALRYCHDNNIIHRDVKPHCVLLASKE---------------------NSAPVK 173

Query: 234 LIDFG-STAF--DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-VELC----- 284
           L  FG +             V T H+ APEV+    +  P D+W  G IL + L      
Sbjct: 174 LGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233

Query: 285 --TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRE 341
             T E LF+                      I +      KY         W    +S  
Sbjct: 234 YGTKERLFE---------------------GIIKG-----KYKMNPRQ---WSH--ISES 262

Query: 342 SIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
           +   V+++        L +D                 P+ER+T  +ALNHP+ + 
Sbjct: 263 AKDLVRRM--------LMLD-----------------PAERITVYEALNHPWLKE 292

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score =  155 bits (394), Expect = 3e-43
 Identities = 88/424 (20%), Positives = 152/424 (35%), Gaps = 66/424 (15%)

Query: 18  APSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGE---NLTPRYKILSKM 74
           +  EA A +    G +   + + +     ++    +             +  RY+I   +
Sbjct: 2   SSHEAAAAQQHNSGTQHTVSGSQQEGQQRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLI 61

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVRSI--------RKYRDAAMIEIDVLQHLAKNDKGG 126
           G G++G V E +D+  +  VAIK +  +        R  R     EI +L  L       
Sbjct: 62  GTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILR-----EIAILNRL------- 109

Query: 127 SSHC-------VQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
            +H        + I    +  + + +V E          +           ++     LL
Sbjct: 110 -NHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLL 166

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLIDF 237
             V Y+H   ++H DLKP N L+     +K+   G  R+             S  +    
Sbjct: 167 VGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMN 226

Query: 238 GSTAFDNQNHSSI----VSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQT 292
             T    +N        V TR YRAPE+IL    ++   D+WS+GCI  EL         
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN------M 280

Query: 293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE--------GAVSRESIK 344
            +           L P          +     F+  +R N  +        G  S E I+
Sbjct: 281 IKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIE 340

Query: 345 AVKKLDRLKNMVSLHVDRARSTLT-----------DLLHGLLRYDPSERLTARQALNHPF 393
           A++K +  K  + +   R  + L             LL  +L ++P++R+T  + L HPF
Sbjct: 341 ALEK-EDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPF 399

Query: 394 FRNL 397
           F+ +
Sbjct: 400 FKEV 403

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  157 bits (398), Expect = 4e-43
 Identities = 82/389 (21%), Positives = 134/389 (34%), Gaps = 87/389 (22%)

Query: 19  PSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGT 78
               +      +     T ++                 V    +++   Y I  ++G G 
Sbjct: 110 RRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGA 169

Query: 79  FGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKGGSSH--CVQIR 134
           FG V    +R T    A K V       D   +  EI  +  L         H   V + 
Sbjct: 170 FGVVHRVTERATGNNFAAKFVM-TPHESDKETVRKEIQTMSVL--------RHPTLVNLH 220

Query: 135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHT 193
           + F+  N + +++E + G  LF+ +          D   E+ RQ+ + + +MH+   +H 
Sbjct: 221 DAFEDDNEMVMIYEFMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENNYVHL 279

Query: 194 DLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIV 251
           DLKPENI+  +                       +S+ +KLIDFG TA     Q+     
Sbjct: 280 DLKPENIMFTT----------------------KRSNELKLIDFGLTAHLDPKQSVKVTT 317

Query: 252 STRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPE 311
            T  + APEV  G    Y  DMWSVG +   L +G + F    + E L            
Sbjct: 318 GTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLR----------- 366

Query: 312 HMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
             ++        +     +   +    +S +    ++KL                     
Sbjct: 367 -NVKSC-----DWNMDDSA---FSG--ISEDGKDFIRKL--------------------- 394

Query: 371 LHGLLRYDPSERLTARQALNHPFFRNLNE 399
               L  DP+ R+T  QAL HP+    N 
Sbjct: 395 ----LLADPNTRMTIHQALEHPWLTPGNA 419

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  150 bits (382), Expect = 5e-43
 Identities = 75/352 (21%), Positives = 124/352 (35%), Gaps = 106/352 (30%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHL 119
            ++   Y + + +G G++G V     + T+ R A K +       D      EI++++ L
Sbjct: 5   GDINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK-YFVEDVDRFKQEIEIMKSL 63

Query: 120 AKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
                    H   +++   F+    I +V E   G  LF+ +   +   F         +
Sbjct: 64  --------DHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMK 113

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            +L +VAY H L + H DLKPEN L ++                         S +KLID
Sbjct: 114 DVLSAVAYCHKLNVAHRDLKPENFLFLTDS---------------------PDSPLKLID 152

Query: 237 FGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-VELC--------T 285
           FG  A     +   + V T +Y +P+V+ G  +   CD WS G ++ V LC        T
Sbjct: 153 FGLAARFKPGKMMRTKVGTPYYVSPQVLEG-LYGPECDEWSAGVMMYVLLCGYPPFSAPT 211

Query: 286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIK 344
              +                        IR        + F       W    VS ++  
Sbjct: 212 DSEVML---------------------KIREG-----TFTFPEKD---WLN--VSPQAES 240

Query: 345 AVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
            +++L        L                    P +R+T+ QAL H +F  
Sbjct: 241 LIRRL--------LTKS-----------------PKQRITSLQALEHEWFEK 267

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  153 bits (387), Expect = 5e-43
 Identities = 50/348 (14%), Positives = 102/348 (29%), Gaps = 88/348 (25%)

Query: 67  RYKILSKMGEGTFGRV-----LECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
              +   +GEG F +V      +  D + +++  +KV +       A   E  +   L +
Sbjct: 66  LVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKP------ANPWEFYIGTQLME 119

Query: 122 N-DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYC---PFPVDLVREFGR 176
                     ++  +   ++N   +V E     +L + +   K       P  LV  F  
Sbjct: 120 RLKPSMQHMFMKFYSAHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAM 179

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           ++L  +  +HD  +IH D+KP+N +L              +           S+ + LID
Sbjct: 180 RMLYMIEQVHDCEIIHGDIKPDNFIL-------------GNGFLEQDDEDDLSAGLALID 226

Query: 237 FGSTAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
            G +            ++   T  ++  E++    W+Y  D + V   +  +  G  +  
Sbjct: 227 LGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKV 286

Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
            +E  E                                              + +  LD 
Sbjct: 287 KNEGGECKP---------------------------------------EGLFRRLPHLDM 307

Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                            +  H +L       L +   L     +   +
Sbjct: 308 WN---------------EFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQ 340

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  154 bits (390), Expect = 5e-43
 Identities = 77/372 (20%), Positives = 138/372 (37%), Gaps = 93/372 (25%)

Query: 67  RYKILS-KMGEGTFGRVLECWDR--QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKND 123
            ++    K+G GT+G V +   +  +  +  A+K +        +A  EI +L+ L    
Sbjct: 21  LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEG-TGISMSACREIALLREL---- 75

Query: 124 KGGSSH--CVQIRNWFDYRNHICI--VFE-------KLGPSLFDFLKRNKYCPFPVDLVR 172
                H   + ++  F       +  +F+        +           K    P  +V+
Sbjct: 76  ----KHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVK 131

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
               Q+L+ + Y+H   ++H DLKP NIL++                       P+   +
Sbjct: 132 SLLYQILDGIHYLHANWVLHRDLKPANILVMGEG--------------------PERGRV 171

Query: 233 KLIDFG-STAFDN-----QNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCT 285
           K+ D G +  F++      +   +V T  YRAPE++LG   ++   D+W++GCI  EL T
Sbjct: 172 KIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLT 231

Query: 286 GEALFQ---------THENLEHLAMMERALGP-----------LPEHMIRRASRGTEKYF 325
            E +F             + + L  +   +G            +PEH             
Sbjct: 232 SEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEH---------STLM 282

Query: 326 RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTA 385
           +   R  +   ++ +   K   K D              S    LL  LL  DP +R+T+
Sbjct: 283 KDFRRNTYTNCSLIKYMEKHKVKPD--------------SKAFHLLQKLLTMDPIKRITS 328

Query: 386 RQALNHPFFRNL 397
            QA+  P+F   
Sbjct: 329 EQAMQDPYFLED 340

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  150 bits (382), Expect = 5e-43
 Identities = 75/352 (21%), Positives = 126/352 (35%), Gaps = 86/352 (24%)

Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI-- 111
           G         +   +    K+G G FG V    +R +     IK +   R       I  
Sbjct: 10  GRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEA 69

Query: 112 EIDVLQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFL--KRNKYCPF 166
           EI+VL+ L         H   ++I   F+  +++ IV E   G  L + +   + +    
Sbjct: 70  EIEVLKSL--------DHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKAL 121

Query: 167 PVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL 226
               V E  +Q++ ++AY H   ++H DLKPENIL   +                     
Sbjct: 122 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS-------------------- 161

Query: 227 PKSSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC 284
              S IK+IDFG       +++ ++   T  Y APEV      ++ CD+WS G ++  L 
Sbjct: 162 -PHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLL 219

Query: 285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIK 344
           TG   F    +LE +                                  P   ++ +++ 
Sbjct: 220 TGCLPFT-GTSLEEVQ-----------QKATYKEPNYAVEC-------RP---LTPQAVD 257

Query: 345 AVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
            +K++        L  D                 P  R +A Q L+H +F+ 
Sbjct: 258 LLKQM--------LTKD-----------------PERRPSAAQVLHHEWFKQ 284

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  153 bits (389), Expect = 7e-43
 Identities = 86/411 (20%), Positives = 150/411 (36%), Gaps = 99/411 (24%)

Query: 1   MMEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNL 60
           M+   +           AP       AL            +           +       
Sbjct: 1   MLSNSQGQSPPVPFPAPAPPPQPPTPALPHPPAQPPPPPPQQFPQFHVKSGLQIKK---- 56

Query: 61  GENLTPRYKILSKM-GEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL 119
              +   YK+ S++ G G  G+VL+ ++++TQE+ A+K+   ++    A   E+++    
Sbjct: 57  -NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM---LQDCPKARR-EVELHWRA 111

Query: 120 AKNDKGGSSHCVQIRNWFD----YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREF 174
           ++       H V+I + ++     R  + IV E L G  LF  ++      F      E 
Sbjct: 112 SQCP-----HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEI 166

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
            + + E++ Y+H + + H D+KPEN+L  S                        ++ +KL
Sbjct: 167 MKSIGEAIQYLHSINIAHRDVKPENLLYTSKR---------------------PNAILKL 205

Query: 235 IDFG-STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-VELC-----TG 286
            DFG +    + N  ++   T +Y APEV+    +   CDMWS+G I+ + LC       
Sbjct: 206 TDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYS 265

Query: 287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKA 345
                         M  R         IR       +Y F       W E  VS E +K 
Sbjct: 266 NHGLAISPG-----MKTR---------IRMG-----QYEFPNP---EWSE--VS-EEVK- 299

Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                   L+  LL+ +P++R+T  + +NHP+   
Sbjct: 300 -----------------------MLIRNLLKTEPTQRMTITEFMNHPWIMQ 327

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score =  152 bits (385), Expect = 9e-43
 Identities = 89/348 (25%), Positives = 146/348 (41%), Gaps = 56/348 (16%)

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLA 120
           N++  +++ S +GEG +G V     + T E VAIK +    K   A     EI +L+H  
Sbjct: 8   NISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK 67

Query: 121 -KNDKGGSSHCVQIRNWF-----DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREF 174
            +N        + I N       +  N + I+ E +   L   +          D ++ F
Sbjct: 68  HEN-------IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYF 117

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAI 232
             Q L +V  +H   +IH DLKP N+L+ S+  +K+   G  R           P     
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177

Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQ 291
            +++F             V+TR YRAPEV+L    +S   D+WS GCIL EL     +F 
Sbjct: 178 GMVEF-------------VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP 224

Query: 292 THENLEHLAMMERALG-PLPEHMIRR-ASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
             +    L ++   +G P  ++ +R   S    +Y +               S+      
Sbjct: 225 GRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIK---------------SLPMYPAA 269

Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
             L+ M      +      DLL  +L +DP++R+TA++AL HP+ +  
Sbjct: 270 P-LEKMFPRVNPKGI----DLLQRMLVFDPAKRITAKEALEHPYLQTY 312

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  152 bits (385), Expect = 1e-42
 Identities = 42/397 (10%), Positives = 87/397 (21%), Gaps = 108/397 (27%)

Query: 35  ATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERV 94
                 ++          +G     L E L            G    V    D +  E  
Sbjct: 41  TATVWPQNAETTVDSLLSQGERKLKLVEPL----------RVGDRSVVFLVRDVERLEDF 90

Query: 95  AIKVVRSIRKYRDAAMIE--------IDVLQHLAKNDKGGSSHCVQIRNWFDYRNH---- 142
           A+KV   +      + +E           L   +  +       +   +    ++     
Sbjct: 91  ALKVFT-MGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFA 149

Query: 143 -------------ICIVFEKLGPSLFDFLKRNKYC-----PFPVDLVREFGRQLLESVAY 184
                          ++       L        +         +  +     QL+   A 
Sbjct: 150 QLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAAN 209

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +    L+H    P+N+ +                G            + L D  +     
Sbjct: 210 LQSKGLVHGHFTPDNLFI-------------MPDGR-----------LMLGDVSALWKVG 245

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSY--PCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
               +      Y   E +     ++    + W +G  +  +      F          ++
Sbjct: 246 TRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF---------GLV 296

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
              +    +    R        F   + L  P+                           
Sbjct: 297 TPGIKGSWKRPSLRVPGTDSLAFGSCTPL--PDFVK------------------------ 330

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                  L+   L +D   RL   +A+  P F  L  
Sbjct: 331 ------TLIGRFLNFDRRRRLLPLEAMETPEFLQLQN 361

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  149 bits (379), Expect = 1e-42
 Identities = 60/350 (17%), Positives = 110/350 (31%), Gaps = 103/350 (29%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKND 123
            Y++L  +G G++GR  +   +   + +  K +         +   + E+++L+ L    
Sbjct: 7   DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL---- 62

Query: 124 KGGSSHC--VQIRNWFDYR--NHICIVFEKL-GPSLFDFLKRNKYC--PFPVDLVREFGR 176
                H   V+  +    R    + IV E   G  L   + +          + V     
Sbjct: 63  ----KHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMT 118

Query: 177 QLLESVAYMHDLRL-----IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
           QL  ++   H         +H DLKP N+ L                             
Sbjct: 119 QLTLALKECHRRSDGGHTVLHRDLKPANVFLD------------------------GKQN 154

Query: 232 IKLIDFG-STAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA 288
           +KL DFG +   ++      + V T +Y +PE +  + ++   D+WS+GC+L ELC    
Sbjct: 155 VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP 214

Query: 289 LFQTHENLEHLAM--MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAV 346
            F    + + LA    E     +P                            S E     
Sbjct: 215 PFTA-FSQKELAGKIREGKFRRIPYRY-------------------------SDE----- 243

Query: 347 KKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                               L +++  +L      R +  + L +P    
Sbjct: 244 --------------------LNEIITRMLNLKDYHRPSVEEILENPLILE 273

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  150 bits (382), Expect = 2e-42
 Identities = 87/349 (24%), Positives = 137/349 (39%), Gaps = 100/349 (28%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHL 119
           + L+  +++ S++G G    V  C  + TQ+  A+K    ++K  D  ++  EI VL  L
Sbjct: 49  DALSDFFEVESELGRGATSIVYRCKQKGTQKPYALK---VLKKTVDKKIVRTEIGVLLRL 105

Query: 120 AKNDKGGSSH--CVQIRNWFDYRNHICIVFE-KLGPSLFDF-LKRNKYC-PFPVDLVREF 174
                   SH   ++++  F+    I +V E   G  LFD  +++  Y      D V+  
Sbjct: 106 --------SHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVK-- 155

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+LE+VAY+H+  ++H DLKPEN+L  +                         + +K+
Sbjct: 156 --QILEAVAYLHENGIVHRDLKPENLLYATPA---------------------PDAPLKI 192

Query: 235 IDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-VELCTGEALFQ 291
            DFG S   +      ++  T  Y APE++ G  +    DMWSVG I  + LC G   F 
Sbjct: 193 ADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLC-GFEPFY 251

Query: 292 THENLEHLAMMERALGPLPEHMIRRASRG----TEKYFRRGSRLNWPEGAVSRESIKAVK 347
                              + M RR           +        W E  VS  +   V+
Sbjct: 252 DERG--------------DQFMFRRILNCEYYFISPW--------WDE--VSLNAKDLVR 287

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
           KL        + +D                 P +RLT  QAL HP+   
Sbjct: 288 KL--------IVLD-----------------PKKRLTTFQALQHPWVTG 311

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  149 bits (378), Expect = 2e-42
 Identities = 73/353 (20%), Positives = 125/353 (35%), Gaps = 105/353 (29%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQH 118
              +  Y +  ++G+G F  V  C  + T    A K++       RD   +  E  + + 
Sbjct: 2   TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61

Query: 119 LAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFG 175
           L         H   V++ +     +   +VF+ + G  LF+ +   ++  +         
Sbjct: 62  L--------QHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREF--YSEADASHCI 111

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           +Q+LES+AY H   ++H +LKPEN+LL S                       K +A+KL 
Sbjct: 112 QQILESIAYCHSNGIVHRNLKPENLLLASKA---------------------KGAAVKLA 150

Query: 236 DFG-STAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-VELC-------- 284
           DFG +    D++       T  Y +PEV+    +S P D+W+ G IL + L         
Sbjct: 151 DFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDE 210

Query: 285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESI 343
               L+                       I+  +               W    V+ E+ 
Sbjct: 211 DQHRLYA---------------------QIKAGAYDYPSPE--------WDT--VTPEAK 239

Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
             +  +        L V+                 P +R+TA QAL  P+  N
Sbjct: 240 SLIDSM--------LTVN-----------------PKKRITADQALKVPWICN 267

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  149 bits (378), Expect = 2e-42
 Identities = 89/361 (24%), Positives = 137/361 (37%), Gaps = 106/361 (29%)

Query: 54  GHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI- 111
           G            RY I+  +G+G+FG VL+C DR TQ+  A+KV+ ++  K +D + I 
Sbjct: 10  GRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTIL 69

Query: 112 -EIDVLQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFP 167
            E+++L+ L         H   +++    +  +   IV E   G  LFD + + K   F 
Sbjct: 70  REVELLKKL--------DHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FS 119

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
                   +Q+   + YMH   ++H DLKPENILL S E                     
Sbjct: 120 EHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE--------------------- 158

Query: 228 KSSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-VELC 284
           K   IK+IDFG +     N      + T +Y APEV+ G  +   CD+WS G IL + L 
Sbjct: 159 KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLS 217

Query: 285 --------TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPE 335
                       + +                      +        KY F       W  
Sbjct: 218 GTPPFYGKNEYDILK---------------------RVETG-----KYAFDLPQ---WRT 248

Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
             +S ++   ++K+        L                    PS R+TA Q L HP+ +
Sbjct: 249 --ISDDAKDLIRKM--------LTFH-----------------PSLRITATQCLEHPWIQ 281

Query: 396 N 396
            
Sbjct: 282 K 282

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  149 bits (379), Expect = 2e-42
 Identities = 71/365 (19%), Positives = 126/365 (34%), Gaps = 90/365 (24%)

Query: 44  SPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--- 100
            PP      +     ++G N    ++I  K+G G F  V           VA+K V+   
Sbjct: 10  GPPVPQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFD 69

Query: 101 -SIRKYRDAAMIEIDVLQHLAKNDKGGSSHC--VQIRNWFDYRNHICIVFEKL-GPSLFD 156
               K R   + EID+L+ L        +H   ++    F   N + IV E      L  
Sbjct: 70  LMDAKARADCIKEIDLLKQL--------NHPNVIKYYASFIEDNELNIVLELADAGDLSR 121

Query: 157 FLKRNKYC--PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK 214
            +K  K      P   V ++  QL  ++ +MH  R++H D+KP N+ +            
Sbjct: 122 MIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT----------- 170

Query: 215 RSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPC 271
                         +  +KL D G    F ++     S+V T +Y +PE I   G+++  
Sbjct: 171 -------------ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKS 217

Query: 272 DMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRL 331
           D+WS+GC+L E+   ++ F   + +   ++ ++                      +    
Sbjct: 218 DIWSLGCLLYEMAALQSPFYG-DKMNLYSLCKKIE--------------------QCDYP 256

Query: 332 NWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
             P    S E                         L  L++  +  DP +R       + 
Sbjct: 257 PLPSDHYSEE-------------------------LRQLVNMCINPDPEKRPDVTYVYDV 291

Query: 392 PFFRN 396
               +
Sbjct: 292 AKRMH 296

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  152 bits (386), Expect = 3e-42
 Identities = 57/343 (16%), Positives = 111/343 (32%), Gaps = 85/343 (24%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
            +     +G G  G ++          VA+K +  + +    A  E+ +L+   ++    
Sbjct: 25  SFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRI--LPECFSFADREVQLLRESDEH---- 77

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
             + ++       R    I  E    +L +++++  +    ++      +Q    +A++H
Sbjct: 78  -PNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLE-PITLLQQTTSGLAHLH 135

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDNQ 245
            L ++H DLKP NIL+           K                   + DFG        
Sbjct: 136 SLNIVHRDLKPHNILISMPN--AHGKIK-----------------AMISDFGLCKKLAVG 176

Query: 246 NHS-----SIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVE-LCTGEALFQTHENL 296
            HS      +  T  + APE++        +Y  D++S GC+    +  G   F      
Sbjct: 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR 236

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           +   ++                               PE                     
Sbjct: 237 QANILLGACSLDCLH----------------------PEKHEDVI--------------- 259

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                 AR    +L+  ++  DP +R +A+  L HPFF +L +
Sbjct: 260 ------AR----ELIEKMIAMDPQKRPSAKHVLKHPFFWSLEK 292

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score =  150 bits (382), Expect = 5e-42
 Identities = 86/349 (24%), Positives = 157/349 (44%), Gaps = 33/349 (9%)

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIK-VVRSIRKYRDAAMI--EIDVLQHL 119
           ++  +Y+++ K+G+G +G V +  DR+T E VA+K +  + +   DA     EI +L  L
Sbjct: 6   HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTEL 65

Query: 120 AKNDKGGSSHCVQIRNWF--DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
           + ++     + V + N    D    + +VF+ +   L   ++ N          +    Q
Sbjct: 66  SGHE-----NIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQ 117

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP--GYKRSSSGEMPFRCLPKSSAIKLI 235
           L++ + Y+H   L+H D+KP NILL +   +K+   G  RS      F  + + +    +
Sbjct: 118 LIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRS------FVNIRRVTNNIPL 171

Query: 236 DFGSTAFDNQNHSSI----VSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALF 290
                  +  +   I    V+TR YRAPE++LG   ++   DMWS+GCIL E+  G+ +F
Sbjct: 172 SINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231

Query: 291 QTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFRR-GSRLNWPEGAVSRESIKAVKK 348
                +  L  +   +  P  E +    S   +        ++   +        K    
Sbjct: 232 PGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL 291

Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
           L ++      + + A     DLL  LL+++P++R++A  AL HPF    
Sbjct: 292 LLKINPKADCNEE-AL----DLLDKLLQFNPNKRISANDALKHPFVSIF 335

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score =  150 bits (380), Expect = 7e-42
 Identities = 78/371 (21%), Positives = 135/371 (36%), Gaps = 77/371 (20%)

Query: 52  REGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDA 108
           +    + +L      +   Y +   +  G++G V    D      VAIK V +       
Sbjct: 5   KGEAAMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRT 63

Query: 109 AMI------------EIDVLQHLA-KNDKGGSSHCVQIRNWF-----DYRNHICIVFEKL 150
             I            EI +L H    N        + +R+ F        + + +V E +
Sbjct: 64  VNILSDSFLCKRVLREIRLLNHFHHPN-------ILGLRDIFVHFEEPAMHKLYLVTELM 116

Query: 151 GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL 210
              L   +   +        ++ F   +L  +  +H+  ++H DL P NILL  +     
Sbjct: 117 RTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADN----- 170

Query: 211 PGYKRSSSGEMPFRCLPKSSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVILGL-GW 267
                                I + DF        + N +  V+ R YRAPE+++   G+
Sbjct: 171 --------------ND-----ITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGF 211

Query: 268 SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG-PLPEHMIRRASRGTEKYFR 326
           +   DMWS GC++ E+   +ALF+       L  +   +G P  E ++  +S     Y R
Sbjct: 212 TKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLR 271

Query: 327 RGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTAR 386
                          S+  V        +V      A     DL+  +L ++P  R++  
Sbjct: 272 N--------------SLSNVPARA-WTAVVPTADPVAL----DLIAKMLEFNPQRRISTE 312

Query: 387 QALNHPFFRNL 397
           QAL HP+F +L
Sbjct: 313 QALRHPYFESL 323

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  147 bits (374), Expect = 2e-41
 Identities = 92/353 (26%), Positives = 147/353 (41%), Gaps = 96/353 (27%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-------RSIRKYRDAAMI--E 112
           + L   Y +   +G G  G V   ++R+T ++VAIK++        S R+   A  +  E
Sbjct: 6   KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETE 65

Query: 113 IDVLQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVD 169
           I++L+ L        +H   ++I+N+FD  ++  IV E + G  LFD +  NK       
Sbjct: 66  IEILKKL--------NHPCIIKIKNFFDAEDYY-IVLELMEGGELFDKVVGNKR--LKEA 114

Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
             + +  Q+L +V Y+H+  +IH DLKPEN+LL S E                     + 
Sbjct: 115 TCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE---------------------ED 153

Query: 230 SAIKLIDFG-STAFDNQNH-SSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCIL-VEL 283
             IK+ DFG S      +   ++  T  Y APEV++ +   G++   D WS+G IL + L
Sbjct: 154 CLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICL 213

Query: 284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESI 343
             G   F  H                   +  + + G   +        W E  VS +++
Sbjct: 214 S-GYPPFSEHRT--------------QVSLKDQITSGKYNF----IPEVWAE--VSEKAL 252

Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
             VKKL        L VD                 P  R T  +AL HP+ ++
Sbjct: 253 DLVKKL--------LVVD-----------------PKARFTTEEALRHPWLQD 280

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  146 bits (372), Expect = 4e-41
 Identities = 47/222 (21%), Positives = 89/222 (40%), Gaps = 32/222 (14%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           + L  +Y I   +G G FG V  C +  +++    K V+     +     EI +L     
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-- 58

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                  + + +   F+    + ++FE + G  +F+ +            +  +  Q+ E
Sbjct: 59  ----RHRNILHLHESFESMEELVMIFEFISGLDIFERINT-SAFELNEREIVSYVHQVCE 113

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
           ++ ++H   + H D++PENI+  +                       +SS IK+I+FG +
Sbjct: 114 ALQFLHSHNIGHFDIRPENIIYQT----------------------RRSSTIKIIEFGQA 151

Query: 240 TAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
                  N   + +   Y APEV      S   DMWS+G ++
Sbjct: 152 RQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLV 193

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score = 43.0 bits (102), Expect = 9e-05
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           D +  LL  +   R+TA +AL HP+ +   E
Sbjct: 236 DFVDRLLVKERKSRMTASEALQHPWLKQKIE 266

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  145 bits (367), Expect = 8e-41
 Identities = 58/230 (25%), Positives = 100/230 (43%), Gaps = 42/230 (18%)

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----SIRKYRDAAMI--EIDV 115
            +   Y++  ++G G F  V +C  + T +  A K ++     S R+      I  E+++
Sbjct: 2   MVEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNI 61

Query: 116 LQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVR 172
           L+ +         H   + + + F+ +  + ++ E + G  LFDFL   +      D   
Sbjct: 62  LREI--------RHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKES--LTEDEAT 111

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
           +F +Q+L+ V Y+H  R+ H DLKPENI+L+                         +  I
Sbjct: 112 QFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN--------------------VPNPRI 151

Query: 233 KLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
           KLIDFG +   +      +I  T  + APE++         DMWS+G I 
Sbjct: 152 KLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 201

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           D +  LL  DP  R+T  Q+L H + + +  
Sbjct: 244 DFIRRLLVKDPKRRMTIAQSLEHSWIKAIRR 274

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  151 bits (383), Expect = 1e-40
 Identities = 74/347 (21%), Positives = 119/347 (34%), Gaps = 69/347 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDK 124
            +++  ++G G FG VL    + T E+VAIK  R     K R+   +EI +++ L     
Sbjct: 15  PWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL----- 69

Query: 125 GGSSH--------CVQIRNWFDYRNHICIVFEKL-GPSLFDFL-KRNKYCPFPVDLVREF 174
              +H                   +   +  E   G  L  +L +    C      +R  
Sbjct: 70  ---NHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTL 126

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
              +  ++ Y+H+ R+IH DLKPENI+L                         +    K+
Sbjct: 127 LSDISSALRYLHENRIIHRDLKPENIVLQPGP---------------------QRLIHKI 165

Query: 235 IDFG-STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT 292
           ID G +   D     +  V T  Y APE++    ++   D WS G +  E  TG   F  
Sbjct: 166 IDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225

Query: 293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL 352
           +          R                 EK        +   GAV   S+  +   + L
Sbjct: 226 NWQPVQWHGKVR-----------------EKSNEHIVVYDDLTGAVKFSSV--LPTPNHL 266

Query: 353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
             +           L   L  +L +   +R T  Q  N   F+ L+ 
Sbjct: 267 SGI-------LAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDS 306

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  146 bits (370), Expect = 3e-40
 Identities = 53/226 (23%), Positives = 97/226 (42%), Gaps = 39/226 (17%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHL 119
            ++   Y IL ++G G FG V  C ++ T      K +       D   +  EI ++  L
Sbjct: 47  GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFIN-TPYPLDKYTVKNEISIMNQL 105

Query: 120 AKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
                    H   + + + F+ +  + ++ E L G  LFD +    Y       V  + R
Sbjct: 106 --------HHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMR 156

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q  E + +MH+  ++H D+KPENI+  +                       K+S++K+ID
Sbjct: 157 QACEGLKHMHEHSIVHLDIKPENIMCET----------------------KKASSVKIID 194

Query: 237 FG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
           FG +T  + ++      +T  + APE++      +  DMW++G + 
Sbjct: 195 FGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLG 240

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score = 43.6 bits (103), Expect = 7e-05
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRN 396
           D +  LL+ +P +RLT   AL HP+ + 
Sbjct: 283 DFIKNLLQKEPRKRLTVHDALEHPWLKG 310

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  144 bits (366), Expect = 3e-40
 Identities = 57/227 (25%), Positives = 89/227 (39%), Gaps = 33/227 (14%)

Query: 61  GENLTPRYKILSK-MGEGTFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVL 116
            EN    Y + SK +G G F  V +C  + T +  A K +   R  +  R   + EI VL
Sbjct: 23  MENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVL 82

Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFG 175
           +             + +   ++  + I ++ E   G  +F             + V    
Sbjct: 83  ELAK-----SCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLI 137

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           +Q+LE V Y+H   ++H DLKP+NILL S                           IK++
Sbjct: 138 KQILEGVYYLHQNNIVHLDLKPQNILLSSIY---------------------PLGDIKIV 176

Query: 236 DFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
           DFG S           I+ T  Y APE++     +   DMW++G I 
Sbjct: 177 DFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIA 223

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRN 396
           D +  LL  +P +R TA   L+H + + 
Sbjct: 266 DFIQSLLVKNPEKRPTAEICLSHSWLQQ 293

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  144 bits (366), Expect = 3e-40
 Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 42/231 (18%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----SIRKYRDAAMI--EID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++     S R+      I  E+ 
Sbjct: 7   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 66

Query: 115 VLQHLAKNDKGGSSHC--VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLV 171
           +L+ +         H   + +   ++ +  + ++ E + G  LFDFL   +      +  
Sbjct: 67  ILKEI--------QHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES--LTEEEA 116

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
            EF +Q+L  V Y+H L++ H DLKPENI+L+                            
Sbjct: 117 TEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN--------------------VPKPR 156

Query: 232 IKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
           IK+IDFG +   D      +I  T  + APE++         DMWS+G I 
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 207

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score = 43.0 bits (102), Expect = 9e-05
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           D +  LL  DP +R+T + +L HP+ +  + 
Sbjct: 250 DFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  145 bits (368), Expect = 3e-40
 Identities = 58/245 (23%), Positives = 101/245 (41%), Gaps = 39/245 (15%)

Query: 44  SPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSI 102
               +   R   ++ N     +  Y +  ++G+G F  V  C  + T    A K++    
Sbjct: 7   MTGGQQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKK 66

Query: 103 RKYRDAAMI--EIDVLQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDF 157
              RD   +  E  + + L         H   V++ +     +   +VF+ + G  LF+ 
Sbjct: 67  LSARDFQKLEREARICRKL--------QHPNIVRLHDSIQEESFHYLVFDLVTGGELFED 118

Query: 158 LKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS 217
           +   ++  +         +Q+LES+AY H   ++H +LKPEN+LL S             
Sbjct: 119 IVAREF--YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA----------- 165

Query: 218 SGEMPFRCLPKSSAIKLIDFG-STAF-DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWS 275
                     K +A+KL DFG +    D++       T  Y +PEV+    +S P D+W+
Sbjct: 166 ----------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWA 215

Query: 276 VGCIL 280
            G IL
Sbjct: 216 CGVIL 220

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score = 45.4 bits (108), Expect = 2e-05
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRN 396
            L+  +L  +P +R+TA QAL  P+  N
Sbjct: 263 SLIDSMLTVNPKKRITADQALKVPWICN 290

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  143 bits (363), Expect = 4e-40
 Identities = 79/338 (23%), Positives = 126/338 (37%), Gaps = 90/338 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKN 122
           RY     +G+G F +  E  D  T+E  A K+V    + K      +  EI + + LA  
Sbjct: 16  RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH- 74

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                 H V    +F+  + + +V E     SL +  KR K         R + RQ++  
Sbjct: 75  -----QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLG 127

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-ST 240
             Y+H  R+IH DLK  N+ L             +   E           +K+ DFG +T
Sbjct: 128 CQYLHRNRVIHRDLKLGNLFL-------------NEDLE-----------VKIGDFGLAT 163

Query: 241 AF--DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
               D +    +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T   L  
Sbjct: 164 KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-SCL-- 220

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
                       +    R  +            + P+  ++                   
Sbjct: 221 ------------KETYLRIKKN---------EYSIPKH-INPV----------------- 241

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
               A      L+  +L+ DP+ R T  + LN  FF +
Sbjct: 242 ----AA----SLIQKMLQTDPTARPTINELLNDEFFTS 271

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  143 bits (364), Expect = 5e-40
 Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 42/231 (18%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----SIRKYRDAAMI--EID 114
           + +   Y I  ++G G F  V +C ++ T    A K ++     + R+      I  E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVS 67

Query: 115 VLQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLV 171
           +L+ +         H   + + + ++ R  + ++ E + G  LFDFL + +      +  
Sbjct: 68  ILRQV--------LHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEA 117

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
             F +Q+L+ V Y+H  ++ H DLKPENI+L+                            
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN--------------------IPIPH 157

Query: 232 IKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
           IKLIDFG +   +      +I  T  + APE++         DMWS+G I 
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score = 43.0 bits (102), Expect = 9e-05
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRN 396
           D +  LL  +  +RLT ++AL HP+   
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITP 278

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  143 bits (362), Expect = 5e-40
 Identities = 68/366 (18%), Positives = 110/366 (30%), Gaps = 118/366 (32%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDK 124
            ++ +  +G G FG V E  ++      AIK +R       R+  M E+  L  L     
Sbjct: 6   DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE---- 61

Query: 125 GGSSHCVQIRNWFDYRN------------HICIVFEKL--GPSLFDFLKRNKYCPFP-VD 169
                 V+  N +  +N            ++ I  + L    +L D++            
Sbjct: 62  --HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQ-LCRKENLKDWMNGRCTIEERERS 118

Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
           +      Q+ E+V ++H   L+H DLKP NI                             
Sbjct: 119 VCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT------------------------MD 154

Query: 230 SAIKLIDFG-STAFDNQ--------------NHSSIVSTRHYRAPEVILGLGWSYPCDMW 274
             +K+ DFG  TA D                 H+  V T+ Y +PE I G  +S+  D++
Sbjct: 155 DVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIF 214

Query: 275 SVGCILVELCTGEALFQTHENLEHLAM--MERALGPLPEHMIRRASRGTEKYFRRGSRLN 332
           S+G IL EL      F T                 PL               +       
Sbjct: 215 SLGLILFELLYP---FSTQMERVRTLTDVRNLKFPPLFTQ-----------KY------- 253

Query: 333 WPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHP 392
                                                ++  +L   P ER  A   + + 
Sbjct: 254 --------------------------------PCEYVMVQDMLSPSPMERPEAINIIENA 281

Query: 393 FFRNLN 398
            F +L+
Sbjct: 282 VFEDLD 287

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  144 bits (365), Expect = 5e-40
 Identities = 89/386 (23%), Positives = 137/386 (35%), Gaps = 100/386 (25%)

Query: 18  APSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEG 77
           AP++        V   GA AAA      P    D      +  G  L          G+G
Sbjct: 3   APADPGKAGVPGVAAPGAPAAAPPAKEIPEVLVDPRSRRRYVRGRFL----------GKG 52

Query: 78  TFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKNDKGGSSHCVQI 133
            F +  E  D  T+E  A K+V    + K      +  EI + + LA        H V  
Sbjct: 53  GFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAH------QHVVGF 106

Query: 134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIH 192
             +F+  + + +V E     SL +  KR K         R + RQ++    Y+H  R+IH
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIH 164

Query: 193 TDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF--DNQNHSS 249
            DLK  N+ L             +   E           +K+ DFG +T    D +    
Sbjct: 165 RDLKLGNLFL-------------NEDLE-----------VKIGDFGLATKVEYDGERKKV 200

Query: 250 IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPL 309
           +  T +Y APEV+   G S+  D+WS+GCI+  L  G+  F+T   L             
Sbjct: 201 LCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET-SCL------------- 246

Query: 310 PEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD 369
            +    R  +            + P+  ++                       A      
Sbjct: 247 -KETYLRIKKN---------EYSIPKH-INPV---------------------AA----S 270

Query: 370 LLHGLLRYDPSERLTARQALNHPFFR 395
           L+  +L+ DP+ R T  + LN  FF 
Sbjct: 271 LIQKMLQTDPTARPTINELLNDEFFT 296

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  143 bits (362), Expect = 2e-39
 Identities = 56/231 (24%), Positives = 98/231 (42%), Gaps = 42/231 (18%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-----SIRKYRDAAMI--EID 114
           + +   Y I  ++G G F  V +C ++ T    A K ++     + R+      I  E+ 
Sbjct: 8   QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVS 67

Query: 115 VLQHLAKNDKGGSSHC--VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLV 171
           +L+ +         H   + + + ++ R  + ++ E + G  LFDFL + +      +  
Sbjct: 68  ILRQV--------LHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKES--LSEEEA 117

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
             F +Q+L+ V Y+H  ++ H DLKPENI+L+                            
Sbjct: 118 TSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN--------------------IPIPH 157

Query: 232 IKLIDFG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
           IKLIDFG +   +      +I  T  + APE++         DMWS+G I 
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVIT 208

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRN 396
           D +  LL  +  +RLT ++AL HP+   
Sbjct: 251 DFIRKLLVKETRKRLTIQEALRHPWITP 278

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  143 bits (363), Expect = 2e-39
 Identities = 72/286 (25%), Positives = 120/286 (41%), Gaps = 46/286 (16%)

Query: 5   ERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENL 64
           ++ ++          S A+    + V  +  +A A    +PP   D R    V      +
Sbjct: 29  DQDSRSGHNEAKEVWSNADLTERMPVKSKRTSALAVDIPAPPAPFDHR---IVTAKQGAV 85

Query: 65  TPRYKILSK--MGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLA 120
              Y +     +G G FG+V +C +  T  ++A K+++  R  +D   +  EI V+  L 
Sbjct: 86  NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIK-TRGMKDKEEVKNEISVMNQL- 143

Query: 121 KNDKGGSSHC--VQIRNWFDYRNHICIVFEKL-GPSLFD-FLKRNKYCPFPVDLVREFGR 176
                   H   +Q+ + F+ +N I +V E + G  LFD  +  +            F +
Sbjct: 144 -------DHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDES--YNLTELDTILFMK 194

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           Q+ E + +MH + ++H DLKPENIL V+                        +  IK+ID
Sbjct: 195 QICEGIRHMHQMYILHLDLKPENILCVN----------------------RDAKQIKIID 232

Query: 237 FG-STAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
           FG +  +   +       T  + APEV+     S+P DMWSVG I 
Sbjct: 233 FGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIA 278

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score = 43.5 bits (103), Expect = 6e-05
 Identities = 9/31 (29%), Positives = 17/31 (54%)

Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           + +  LL  + S R++A +AL HP+  +   
Sbjct: 321 EFISKLLIKEKSWRISASEALKHPWLSDHKL 351

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  141 bits (357), Expect = 3e-39
 Identities = 78/364 (21%), Positives = 123/364 (33%), Gaps = 116/364 (31%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV----------RSIRKYRDAAMI 111
                 Y+    +G G    V  C  + T +  A+K++            +++ R+A + 
Sbjct: 13  HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLK 72

Query: 112 EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL 170
           E+D+L+ ++     G  + +Q+++ ++      +VF+ +    LFD+L            
Sbjct: 73  EVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVT--LSEKE 125

Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
            R+  R LLE +  +H L ++H DLKPENILL                            
Sbjct: 126 TRKIMRALLEVICALHKLNIVHRDLKPENILLDD------------------------DM 161

Query: 231 AIKLIDFG-STAF-DNQNHSSIVSTRHYRAPEVILGL------GWSYPCDMWSVGCIL-V 281
            IKL DFG S      +    +  T  Y APE+I         G+    DMWS G I+  
Sbjct: 162 NIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT 221

Query: 282 ELC--------TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLN 332
            L             + +                     MI         Y F       
Sbjct: 222 LLAGSPPFWHRKQMLMLR---------------------MIMSG-----NYQFGSP---E 252

Query: 333 WPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHP 392
           W +   S      V +         L V                  P +R TA +AL HP
Sbjct: 253 WDD--YSDTVKDLVSRF--------LVV-----------------QPQKRYTAEEALAHP 285

Query: 393 FFRN 396
           FF+ 
Sbjct: 286 FFQQ 289

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  142 bits (360), Expect = 5e-39
 Identities = 82/420 (19%), Positives = 131/420 (31%), Gaps = 115/420 (27%)

Query: 3   EQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGE 62
              R  +R  +          A                      +     +    +   +
Sbjct: 31  NLNREQRRAFIRSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAK 90

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV---------RSIRKYRDAAMIEI 113
               +Y     +G G    V  C  R T    A+K++           + + R+A   E 
Sbjct: 91  EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRET 150

Query: 114 DVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVR 172
            +L+ +A     G  H + + + ++  + + +VF+ +    LFD+L             R
Sbjct: 151 HILRQVA-----GHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVA--LSEKETR 203

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
              R LLE+V+++H   ++H DLKPENILL                          +  I
Sbjct: 204 SIMRSLLEAVSFLHANNIVHRDLKPENILLDD------------------------NMQI 239

Query: 233 KLIDFG-STAF-DNQNHSSIVSTRHYRAPEVILGL------GWSYPCDMWSVGCIL-VEL 283
           +L DFG S      +    +  T  Y APE++         G+    D+W+ G IL   L
Sbjct: 240 RLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL 299

Query: 284 C--------TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWP 334
                        + +                     MI        +Y F       W 
Sbjct: 300 AGSPPFWHRRQILMLR---------------------MIMEG-----QYQFSSP---EWD 330

Query: 335 EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFF 394
           +   S      + +L        L VD                 P  RLTA QAL HPFF
Sbjct: 331 D--RSSTVKDLISRL--------LQVD-----------------PEARLTAEQALQHPFF 363

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  142 bits (361), Expect = 1e-38
 Identities = 52/229 (22%), Positives = 93/229 (40%), Gaps = 40/229 (17%)

Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDVLQ 117
               T  Y++  ++G+G F  V  C      +  A  ++       RD   +  E  + +
Sbjct: 6   CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICR 65

Query: 118 HLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREF 174
            L         H   V++ +      H  ++F+ + G  LF+ +   +Y  +        
Sbjct: 66  LL--------KHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREY--YSEADASHC 115

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
            +Q+LE+V + H + ++H +LKPEN+LL S                       K +A+KL
Sbjct: 116 IQQILEAVLHCHQMGVVHRNLKPENLLLASKL---------------------KGAAVKL 154

Query: 235 IDFG-STAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
            DFG +   + +         T  Y +PEV+    +  P D+W+ G IL
Sbjct: 155 ADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVIL 203

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score = 45.0 bits (107), Expect = 3e-05
 Identities = 12/28 (42%), Positives = 21/28 (75%)

Query: 369 DLLHGLLRYDPSERLTARQALNHPFFRN 396
           DL++ +L  +PS+R+TA +AL HP+  +
Sbjct: 246 DLINKMLTINPSKRITAAEALKHPWISH 273

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  139 bits (352), Expect = 2e-38
 Identities = 68/384 (17%), Positives = 123/384 (32%), Gaps = 106/384 (27%)

Query: 35  ATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERV 94
            ++    H S  R +   +GH +  +       Y  + K+GEG F  V            
Sbjct: 2   GSSHHHHHHSSGRENLYFQGH-MVIIDNK---HYLFIQKLGEGGFSYVDLVEGLHDGHFY 57

Query: 95  AIKVVRSIRKY-RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF----DYRNHICIVFE- 148
           A+K +    +  R+ A  E D+ +           + +++  +       ++   ++   
Sbjct: 58  ALKRILCHEQQDREEAQREADMHRLF------NHPNILRLVAYCLRERGAKHEAWLLLPF 111

Query: 149 -KLGPSLFDFLKRNKYC--PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSS 205
            K G +L++ ++R K        D +      +   +  +H     H DLKP NILL   
Sbjct: 112 FKRG-TLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL--- 167

Query: 206 EFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS------------TAFDNQNHSSIVST 253
                        G+             L+D GS             A   Q+ ++   T
Sbjct: 168 ----------GDEGQ-----------PVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206

Query: 254 RHYRAPEVI---LGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLP 310
             YRAPE+             D+WS+GC+L  +  GE  +      +    +  A+    
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD--MVFQKGDSVALAVQ--- 261

Query: 311 EHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL 370
                             ++L+ P+    R S                      S L  L
Sbjct: 262 ------------------NQLSIPQS--PRHS----------------------SALWQL 279

Query: 371 LHGLLRYDPSERLTARQALNHPFF 394
           L+ ++  DP +R      L+    
Sbjct: 280 LNSMMTVDPHQRPHIPLLLSQLEA 303

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score =  141 bits (358), Expect = 2e-38
 Identities = 85/390 (21%), Positives = 148/390 (37%), Gaps = 62/390 (15%)

Query: 45  PPRRDDDREGHYVFNLGE-NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI- 102
                  RE  Y   +   ++   Y I   +G G++G V   +D+ T++ VAIK V  + 
Sbjct: 4   HHHHSSGRENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMF 63

Query: 103 -------RKYRDAAMIEIDVLQHLAKNDKGGSSH--CVQIRNWF-----DYRNHICIVFE 148
                  R  R     EI +L  L             +++ +          + + IV E
Sbjct: 64  EDLIDCKRILR-----EITILNRL--------KSDYIIRLYDLIIPDDLLKFDELYIVLE 110

Query: 149 KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI 208
                L    K         + ++     LL    ++H+  +IH DLKP N LL     +
Sbjct: 111 IADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSV 168

Query: 209 KLP--GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILG 264
           K+   G  R+ + E     +      +     +     Q  +H   V TR YRAPE+IL 
Sbjct: 169 KVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSH---VVTRWYRAPELILL 225

Query: 265 L-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEK 323
              ++   D+WS GCI  EL          ++  +       L P          R ++K
Sbjct: 226 QENYTKSIDIWSTGCIFAELLNML------QSHINDPTNRFPLFPGSSCFPLSPDRNSKK 279

Query: 324 YFRRGSRLNWPE-----GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT---------- 368
              + +R          G  + + +K + K   +   + L   R    L           
Sbjct: 280 VHEKSNRDQLNIIFNIIGTPTEDDLKNINK-PEVIKYIKLFPHRKPINLKQKYPSISDDG 338

Query: 369 -DLLHGLLRYDPSERLTARQALNHPFFRNL 397
            +LL  +L+++P++R+T  QAL+HP+ +++
Sbjct: 339 INLLESMLKFNPNKRITIDQALDHPYLKDV 368

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  138 bits (349), Expect = 3e-38
 Identities = 71/338 (21%), Positives = 132/338 (39%), Gaps = 92/338 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKN 122
            ++I   +G+G FG V    ++Q++  +A+KV+    + K      +  E+++  HL   
Sbjct: 10  DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL--- 66

Query: 123 DKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                 H   +++  +F     + ++ E     +++  L++     F       +  +L 
Sbjct: 67  -----RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELA 119

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
            +++Y H  R+IH D+KPEN+LL              S+GE           +K+ DFG 
Sbjct: 120 NALSYCHSKRVIHRDIKPENLLL-------------GSAGE-----------LKIADFGW 155

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
           S    +   + +  T  Y  PE+I G       D+WS+G +  E   G+  F+ +    +
Sbjct: 156 SVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN---TY 212

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
               +R         I R                +P+  V+                   
Sbjct: 213 QETYKR---------ISRV------------EFTFPDF-VTEG----------------- 233

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
               AR    DL+  LL+++PS+R   R+ L HP+   
Sbjct: 234 ----AR----DLISRLLKHNPSQRPMLREVLEHPWITA 263

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  138 bits (350), Expect = 5e-38
 Identities = 80/380 (21%), Positives = 129/380 (33%), Gaps = 102/380 (26%)

Query: 31  GHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQT 90
            H  +          P  D            E L  +Y++   +G G FG V        
Sbjct: 8   HHHSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSD 67

Query: 91  QERVAIKVV--RSIRKYRDAAMI-----EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI 143
              VAIK V    I  + +         E+ +L+ ++     G S  +++ +WF+  +  
Sbjct: 68  NLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----GFSGVIRLLDWFERPDSF 123

Query: 144 CIVFEKLGPS--LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENIL 201
            ++ E+  P   LFDF+          +L R F  Q+LE+V + H+  ++H D+K ENIL
Sbjct: 124 VLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENIL 181

Query: 202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAP 259
           +                             +KLIDFGS A   D         TR Y  P
Sbjct: 182 IDL-----------------------NRGELKLIDFGSGALLKDTVYTDF-DGTRVYSPP 217

Query: 260 EVILGLGWSY---PCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRR 316
           E I      Y      +WS+G +L ++  G+                     +P      
Sbjct: 218 EWIRYHR--YHGRSAAVWSLGILLYDMVCGD---------------------IPFEHDEE 254

Query: 317 ASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR 376
             RG         ++ + +  VS E                            L+   L 
Sbjct: 255 IIRG---------QVFFRQR-VSSECQ-------------------------HLIRWCLA 279

Query: 377 YDPSERLTARQALNHPFFRN 396
             PS+R T  +  NHP+ ++
Sbjct: 280 LRPSDRPTFEEIQNHPWMQD 299

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  136 bits (346), Expect = 7e-38
 Identities = 71/340 (20%), Positives = 130/340 (38%), Gaps = 93/340 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKN 122
            +K+ + +G+G+F  V       T   VAIK++  +++ K      +  E+ +   L   
Sbjct: 12  DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQL--- 68

Query: 123 DKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                 H   +++ N+F+  N++ +V E      +  +LK     PF  +  R F  Q++
Sbjct: 69  -----KHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMHQII 122

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
             + Y+H   ++H DL   N+LL             + +             IK+ DFG 
Sbjct: 123 TGMLYLHSHGILHRDLTLSNLLL-------------TRNMN-----------IKIADFGL 158

Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                  ++ H ++  T +Y +PE+          D+WS+GC+   L  G   F T + +
Sbjct: 159 ATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDT-DTV 217

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
           +    + +         +  A                P   +S E               
Sbjct: 218 K--NTLNK---------VVLA------------DYEMPS-FLSIE--------------- 238

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                 A+    DL+H LLR +P++RL+    L+HPF   
Sbjct: 239 ------AK----DLIHQLLRRNPADRLSLSSVLDHPFMSR 268

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  137 bits (346), Expect = 3e-37
 Identities = 64/361 (17%), Positives = 119/361 (32%), Gaps = 95/361 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI------------- 111
            Y+I+  + +G F +++ C   +  +  A+K      + K RD                 
Sbjct: 32  DYRIIRTLNQGKFNKIILC--EKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDD 89

Query: 112 ---EIDVLQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY-- 163
              E+ ++  +         +  C+         + + I++E +   S+  F +      
Sbjct: 90  FKNELQIITDI--------KNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLD 141

Query: 164 ----CPFPVDLVREFGRQLLESVAYMHDLRLI-HTDLKPENILLVSSEFIKLPGYKRSSS 218
               C  P+ +++   + +L S +Y+H+ + I H D+KP NIL+               +
Sbjct: 142 KNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM-------------DKN 188

Query: 219 GEMPFRCLPKSSAIKLIDFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSY--PCDMWS 275
           G            +KL DFG S    ++       T  +  PE             D+WS
Sbjct: 189 GR-----------VKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWS 237

Query: 276 VGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPE 335
           +G  L  +      F    +L  L                               + +P 
Sbjct: 238 LGICLYVMFYNVVPFSLKISLVEL--------------FNNIRTK---------NIEYPL 274

Query: 336 GAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                      KK     N +S   +       D L   LR +P+ER+T+  AL H +  
Sbjct: 275 DRNHFLYPLTNKKSTCSNNFLS---NEDI----DFLKLFLRKNPAERITSEDALKHEWLA 327

Query: 396 N 396
           +
Sbjct: 328 D 328

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  136 bits (344), Expect = 3e-37
 Identities = 72/374 (19%), Positives = 123/374 (32%), Gaps = 100/374 (26%)

Query: 36  TAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVA 95
           +        PP               E     Y++   +G+G FG V        + +VA
Sbjct: 1   SMLTKPLQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVA 60

Query: 96  IKVV--RSIRKYRDAAMI-----EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFE 148
           IKV+    +  +   +       E+ +L  +     GG    +++ +WF+ +    +V E
Sbjct: 61  IKVIPRNRVLGWSPLSDSVTCPLEVALLWKV--GAGGGHPGVIRLLDWFETQEGFMLVLE 118

Query: 149 KLGPS--LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE 206
           +  P+  LFD++      P      R F  Q++ ++ + H   ++H D+K ENIL+    
Sbjct: 119 RPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL-- 174

Query: 207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--DNQNHSSIVSTRHYRAPEVILG 264
                                +    KLIDFGS A   D         TR Y  PE I  
Sbjct: 175 ---------------------RRGCAKLIDFGSGALLHDEPYTDF-DGTRVYSPPEWISR 212

Query: 265 LGWSY---PCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGT 321
               Y   P  +WS+G +L ++  G+                     +P    +      
Sbjct: 213 HQ--YHALPATVWSLGILLYDMVCGD---------------------IPFERDQEILEA- 248

Query: 322 EKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE 381
                    L++P   VS +                            L+   L   PS 
Sbjct: 249 --------ELHFPAH-VSPDCC-------------------------ALIRRCLAPKPSS 274

Query: 382 RLTARQALNHPFFR 395
           R +  + L  P+ +
Sbjct: 275 RPSLEEILLDPWMQ 288

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  135 bits (342), Expect = 9e-37
 Identities = 64/346 (18%), Positives = 101/346 (29%), Gaps = 111/346 (32%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
                 ++G G+FG V    D+QT  + A+K VR         + E+     L+      
Sbjct: 59  WMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVACAGLS------ 108

Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
           S   V +         + I  E L G SL   +K  +    P D    +  Q LE + Y+
Sbjct: 109 SPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK--QMGCLPEDRALYYLGQALEGLEYL 166

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG------- 238
           H  R++H D+K +N+LL             SS G          S   L DFG       
Sbjct: 167 HTRRILHGDVKADNVLL-------------SSDG----------SRAALCDFGHALCLQP 203

Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE---------- 287
                       I  T  + APEV++G       D+WS  C+++ +  G           
Sbjct: 204 DGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
                      +A     +  +P                            +        
Sbjct: 264 LCL-------KIASEPPPIREIPPS-------------------------CAPL------ 285

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                                  +   LR +P  R +A +      
Sbjct: 286 -------------------TAQAIQEGLRKEPVHRASAMELRRKVG 312

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  136 bits (344), Expect = 1e-36
 Identities = 62/420 (14%), Positives = 114/420 (27%), Gaps = 121/420 (28%)

Query: 21  EAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFG 80
               Q  +    E   +AA   VS    +  +       LGE         + +G+    
Sbjct: 29  NRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGER-PRTLVRGTVLGQEDPY 87

Query: 81  RVLECWDRQTQERVAIKVV--------RSIRKYRDAAMI---------EIDVLQHLAKND 123
             LE  D++T E   + V          +I++ ++  +          +     HL    
Sbjct: 88  AYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIF 147

Query: 124 KGGSSHCVQIRNWFDYRNH--------ICIVFEKLGPSLFDFL-----KRNKYCPFPVDL 170
                   Q +     R             ++ ++  +L  F        + +       
Sbjct: 148 PFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHA 207

Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
             +   Q++  +A +H   L+HT L+P +I+L                G           
Sbjct: 208 RLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL-------------DQRGG---------- 244

Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGW-----------SYPCDMWSVGCI 279
            + L  F     D     S   +R +  PE+                 ++  D W++G +
Sbjct: 245 -VFLTGFEHLVRDGARVVS-SVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLV 302

Query: 280 LVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVS 339
           +  +   +    T +     +                     E  FR     N P+    
Sbjct: 303 IYWIWCADLPI-TKDAALGGS---------------------EWIFRS--CKNIPQPVR- 337

Query: 340 RESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                                         LL G LRY   +RL   QA+  P +  L  
Sbjct: 338 -----------------------------ALLEGFLRYPKEDRLLPLQAMETPEYEQLRT 368

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  134 bits (339), Expect = 1e-36
 Identities = 78/348 (22%), Positives = 131/348 (37%), Gaps = 111/348 (31%)

Query: 62  ENLTPRYKILSKM-GEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA 120
             +   YK+ S++ G G  G+VL+ ++++TQE+ A+K+++   K R     E+++    +
Sbjct: 13  NAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR----EVELHWRAS 68

Query: 121 KNDKGGSSHCVQIRNWFD----YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFG 175
                   H V+I + ++     R  + IV E L G  LF  ++      F      E  
Sbjct: 69  -----QCPHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIM 123

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           + + E++ Y+H + + H D+KPEN+L  S                        ++ +KL 
Sbjct: 124 KSIGEAIQYLHSINIAHRDVKPENLLYTSKR---------------------PNAILKLT 162

Query: 236 DFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL-VELC-----TGEAL 289
           DFG                   A E   G  +   CDMWS+G I+ + LC          
Sbjct: 163 DFG------------------FAKET-TGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 203

Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKY-FRRGSRLNWPEGAVSRESIKAVKK 348
                      M  R         IR       +Y F       W E  VS E +K    
Sbjct: 204 LAISP-----GMKTR---------IRMG-----QYEFPNP---EWSE--VS-EEVK---- 234

Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                L+  LL+ +P++R+T  + +NHP+   
Sbjct: 235 --------------------MLIRNLLKTEPTQRMTITEFMNHPWIMQ 262

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  133 bits (336), Expect = 2e-36
 Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 39/222 (17%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQI 133
           G+GT+G V    D   Q R+AIK +     +Y      EI + +HL         + VQ 
Sbjct: 31  GKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK------HKNIVQY 84

Query: 134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVD--LVREFGRQLLESVAYMHDLRL 190
              F     I I  E++ G SL   L+ +K+ P   +   +  + +Q+LE + Y+HD ++
Sbjct: 85  LGSFSENGFIKIFMEQVPGGSLSALLR-SKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143

Query: 191 IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS---TAFDNQNH 247
           +H D+K +N+L+ +                        S  +K+ DFG+    A  N   
Sbjct: 144 VHRDIKGDNVLINT-----------------------YSGVLKISDFGTSKRLAGINPCT 180

Query: 248 SSIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILVELCTGE 287
            +   T  Y APE+I     G+    D+WS+GC ++E+ TG+
Sbjct: 181 ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  132 bits (335), Expect = 4e-36
 Identities = 70/335 (20%), Positives = 123/335 (36%), Gaps = 88/335 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKN 122
            + I   +G+G FG V    ++Q +  +A+KV+    + K      +  EI++  HL   
Sbjct: 15  DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-- 72

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                 + +++ N+F  R  I ++ E      L+  L+++    F       F  +L ++
Sbjct: 73  ----HPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADA 126

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-ST 240
           + Y H+ ++IH D+KPEN+L+                GE           +K+ DFG S 
Sbjct: 127 LHYCHERKVIHRDIKPENLLM-------------GYKGE-----------LKIADFGWSV 162

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              +    ++  T  Y  PE+I G       D+W  G +  E   G   F    +     
Sbjct: 163 HAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD-SPSHT--E 219

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
              R         I                L +P   +S                     
Sbjct: 220 THRR---------IVNV------------DLKFPPF-LSDG------------------- 238

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
             ++    DL+  LLRY P +RL  +  + HP+ +
Sbjct: 239 --SK----DLISKLLRYHPPQRLPLKGVMEHPWVK 267

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  130 bits (327), Expect = 1e-34
 Identities = 68/401 (16%), Positives = 119/401 (29%), Gaps = 147/401 (36%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDV---LQH---- 118
           ++ +  MG G FG V E  ++      AIK +   +    R+  M E+     L+H    
Sbjct: 8   FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV 67

Query: 119 --------------------------------------------LAKNDKGGSSHCVQIR 134
                                                       + + D   + + V   
Sbjct: 68  RYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQL 127

Query: 135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFP-VDLVREFGRQLLESVAYMHDLRLIH 192
                + ++ I  +     +L D++ R          +      Q+ E+V ++H   L+H
Sbjct: 128 QPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMH 187

Query: 193 TDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-------------- 238
            DLKP NI               +               +K+ DFG              
Sbjct: 188 RDLKPSNIFF-------------TMDDV-----------VKVGDFGLVTAMDQDEEEQTV 223

Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE 297
            +       H+  V T+ Y +PE I G  +S+  D++S+G IL EL      F T     
Sbjct: 224 LTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYS---FSTQ---- 276

Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV- 356
               MER                                          + +  ++N+  
Sbjct: 277 ----MERV-----------------------------------------RIITDVRNLKF 291

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
            L   +       ++  +L   P+ER  A   + +  F NL
Sbjct: 292 PLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFENL 332

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score =  127 bits (321), Expect = 1e-33
 Identities = 74/334 (22%), Positives = 127/334 (38%), Gaps = 43/334 (12%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKG 125
           ++ +S++G G  G V +   + +   +A K++    K   R+  + E+ VL         
Sbjct: 35  FEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN----- 89

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S + V     F     I I  E + G SL   LK+      P  ++ +    +++ + Y
Sbjct: 90  -SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTY 146

Query: 185 MHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF 242
           + +  +++H D+KP NIL+             +S GE           IKL DFG S   
Sbjct: 147 LREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQL 182

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
            +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G       +  E   M 
Sbjct: 183 IDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMF 242

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
              +         R         + G     P      E +  +      +    L    
Sbjct: 243 GCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAI--FELLDYIVN----EPPPKLPSGV 296

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                 D ++  L  +P+ER   +Q + H F + 
Sbjct: 297 FSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 330

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  125 bits (315), Expect = 2e-33
 Identities = 67/363 (18%), Positives = 136/363 (37%), Gaps = 91/363 (25%)

Query: 46  PRRDDDREGHYVFNLGENLTPRY-KILSKMGEGTFGRVLECWDRQTQERVAIKVVR---S 101
            ++ DD E      +G +   R+ K   ++G G+F  V +  D +T   VA   ++    
Sbjct: 5   NQQQDDIEELETKAVGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKL 64

Query: 102 IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ-IRNWFDY---RNHICIVFEKL-GPSLFD 156
            +  R     E ++L+ L         + V+   +W      +  I +V E +   +L  
Sbjct: 65  TKSERQRFKEEAEMLKGLQ------HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKT 118

Query: 157 FLKRNKYCPFPVDLVREFGRQLLESVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGYK 214
           +LKR K     + ++R + RQ+L+ + ++H     +IH DLK +NI +            
Sbjct: 119 YLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFI------------ 164

Query: 215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHS-SIVSTRHYRAPEVILGLGWSYPCDM 273
              +G            +K+ D G       + + +++ T  + APE+     +    D+
Sbjct: 165 TGPTGS-----------VKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDV 212

Query: 274 WSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNW 333
           ++ G  ++E+ T E  +   +N   +                         +RR +    
Sbjct: 213 YAFGMCMLEMATSEYPYSECQNAAQI-------------------------YRRVTSGVK 247

Query: 334 PEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
           P               D++              + +++ G +R +  ER + +  LNH F
Sbjct: 248 PA------------SFDKVAI----------PEVKEIIEGCIRQNKDERYSIKDLLNHAF 285

Query: 394 FRN 396
           F+ 
Sbjct: 286 FQE 288

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  124 bits (314), Expect = 1e-32
 Identities = 67/285 (23%), Positives = 108/285 (37%), Gaps = 53/285 (18%)

Query: 37  AAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAI 96
              +   +  R   D  G     LGE    R ++   + EG F  V E  D  +    A+
Sbjct: 3   GPGSLGGASGRDQSDFVGQ-TVELGEL---RLRVRRVLAEGGFAFVYEAQDVGSGREYAL 58

Query: 97  K-VVRSIRKYRDAAMIEIDVLQHLAKND---KGGSSHCVQIRNWFDYRNHICIVFEKLGP 152
           K ++ +  +   A + E+  ++ L+ +    +  S+  +        +    ++ E    
Sbjct: 59  KRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKG 118

Query: 153 SLFDFLKRNKYC-PFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIK 209
            L +FLK+ +   P   D V +   Q   +V +MH  +  +IH DLK EN+LL       
Sbjct: 119 QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL------- 171

Query: 210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVS-----------TRH--- 255
                 S+ G            IKL DFGS    +       S           TR+   
Sbjct: 172 ------SNQGT-----------IKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTP 214

Query: 256 -YRAPEVILGLGWSY---PCDMWSVGCILVELCTGEALFQTHENL 296
            YR PE+I            D+W++GCIL  LC  +  F+    L
Sbjct: 215 MYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKL 259

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  124 bits (312), Expect = 6e-32
 Identities = 59/423 (13%), Positives = 114/423 (26%), Gaps = 128/423 (30%)

Query: 21  EAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSK---MGEG 77
               Q  +    E   +AA   VS    +  +     F +   L  R + L +   +G+ 
Sbjct: 34  NRIPQANVRTTSEYMQSAADSLVSTSLWNTGQP----FRVESELGERPRTLVRGTVLGQE 89

Query: 78  TFGRVLECWDRQTQERVAIKVVRS--------IRKYRDAAMIE------------IDVLQ 117
                LE  D++T E   + V           I++ ++  +                 L+
Sbjct: 90  DPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLR 149

Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIV------------FEKLGPSLFDFLKRNKYCP 165
            +   D        ++         + ++             +  G  L      +K   
Sbjct: 150 FIFPFDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHK--S 207

Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
                  +   Q++  +A +H   L+HT L+P +I+L                G      
Sbjct: 208 LVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVL-------------DQRGG----- 249

Query: 226 LPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLG-----WSYPCDMWSV 276
                 + L  F     D  +         +     A  ++          ++  D W++
Sbjct: 250 ------VFLTGFEHLVRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303

Query: 277 GCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEG 336
           G  +  +   +    T +     +                     E  FR    +  P+ 
Sbjct: 304 GLAIYWIWCADLPN-TDDAALGGS---------------------EWIFRSCKNI--PQ- 338

Query: 337 AVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                    V+ L                     L G LRY   +RL   QA+  P +  
Sbjct: 339 --------PVRAL---------------------LEGFLRYPKEDRLLPLQAMETPEYEQ 369

Query: 397 LNE 399
           L  
Sbjct: 370 LRT 372

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  119 bits (301), Expect = 6e-31
 Identities = 73/343 (21%), Positives = 123/343 (35%), Gaps = 102/343 (29%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAM---------IEIDVLQ 117
           +Y  +S +G G FG V    D++  + V +K ++  +   D  +         +EI +L 
Sbjct: 25  KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84

Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPS--LFDFLKRNKYCPFPVDLVREFG 175
            +        ++ +++ + F+ +    +V EK G    LF F+ R+        L     
Sbjct: 85  RVEH------ANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPR--LDEPLASYIF 136

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           RQL+ +V Y+    +IH D+K ENI++                             IKLI
Sbjct: 137 RQLVSAVGYLRLKDIIHRDIKDENIVIAE------------------------DFTIKLI 172

Query: 236 DFGSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQT 292
           DFGS A+  +     +   T  Y APEV++G  +  P  +MWS+G  L  L   E     
Sbjct: 173 DFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEE----- 227

Query: 293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL 352
                            P   +                ++ P   VS+E +         
Sbjct: 228 ----------------NPFCELEETVEA---------AIHPPYL-VSKELM--------- 252

Query: 353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                            L+ GLL+  P  R T  + +  P+  
Sbjct: 253 ----------------SLVSGLLQPVPERRTTLEKLVTDPWVT 279

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  113 bits (286), Expect = 1e-28
 Identities = 73/342 (21%), Positives = 130/342 (38%), Gaps = 101/342 (29%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQ---HL 119
            Y I   +GEG+FG+V      +TQ++VA+K +  + ++K      +  EI  L+   H 
Sbjct: 10  PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH- 68

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                    H +++ +       I +V E  G  LFD++   K      D  R F +Q++
Sbjct: 69  --------PHIIKLYDVITTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQII 118

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
            ++ Y H  +++H DLKPEN+LL  +                          +K+ DFG 
Sbjct: 119 CAIEYCHRHKIVHRDLKPENLLLDDNL------------------------NVKIADFGL 154

Query: 240 TAFDNQNHSSIVSTR----HYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHE 294
           +      +   + T     +Y APEVI G  ++ P  D+WS G +L  +  G   F   E
Sbjct: 155 SNIMTDGN--FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD-DE 211

Query: 295 NLEHL-AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
            + +L   +   +  +P+ +                         S  +           
Sbjct: 212 FIPNLFKKVNSCVYVMPDFL-------------------------SPGAQ---------- 236

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                           L+  ++  DP +R+T ++    P+F 
Sbjct: 237 ---------------SLIRRMIVADPMQRITIQEIRRDPWFN 263

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  111 bits (280), Expect = 4e-28
 Identities = 71/346 (20%), Positives = 118/346 (34%), Gaps = 97/346 (28%)

Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVV-RSIRKYRDAAMI--EIDV-- 115
            +     Y++L  +G+G F +V       T   VAIK++ ++         +  E+ +  
Sbjct: 10  EQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK 69

Query: 116 -LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
            L H          + V++    +    + ++ E   G  +FD+L  +          R 
Sbjct: 70  ILNH---------PNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARS 118

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
             RQ++ +V Y H  R++H DLK EN+L                        L     IK
Sbjct: 119 KFRQIVSAVQYCHQKRIVHRDLKAENLL------------------------LDADMNIK 154

Query: 234 LIDFG-STAFDNQNH-SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALF 290
           + DFG S  F       +      Y APE+  G  +  P  D+WS+G IL  L +G   F
Sbjct: 155 IADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214

Query: 291 QTHENLEHL-AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
              +NL+ L   + R    +P +M                         S +        
Sbjct: 215 D-GQNLKELRERVLRGKYRIPFYM-------------------------STDCE------ 242

Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                              +LL   L  +P +R T  Q +   +  
Sbjct: 243 -------------------NLLKRFLVLNPIKRGTLEQIMKDRWIN 269

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  109 bits (276), Expect = 8e-28
 Identities = 75/340 (22%), Positives = 123/340 (36%), Gaps = 96/340 (28%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKN 122
            Y +   +G GTFG+V     + T  +VA+K++  + IR       I  EI  L+     
Sbjct: 12  HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-- 69

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                 H +++           +V E + G  LFD++ ++          R   +Q+L +
Sbjct: 70  ----HPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSA 123

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           V Y H   ++H DLKPEN+LL +                            K+ DFG + 
Sbjct: 124 VDYCHRHMVVHRDLKPENVLLDAHM------------------------NAKIADFGLSN 159

Query: 242 FDNQNHSSIVSTR----HYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHENL 296
             +      + T     +Y APEVI G  ++ P  D+WS G IL  L  G   F   E++
Sbjct: 160 MMSDGE--FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFD-DEHV 216

Query: 297 EHL-AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
             L   +   +  +PE++                         +R               
Sbjct: 217 PTLFKKIRGGVFYIPEYL-------------------------NRSVA------------ 239

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                         LL  +L+ DP +R T +    H +F+
Sbjct: 240 -------------TLLMHMLQVDPLKRATIKDIREHEWFK 266

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score =  111 bits (280), Expect = 1e-27
 Identities = 55/347 (15%), Positives = 113/347 (32%), Gaps = 52/347 (14%)

Query: 68  YKILSKMGEG--TFGRVLECWDRQTQERVAIKVV---RSIRKYRDAAMIEIDVLQHLAKN 122
           Y++L+ +G+G      V     + T E V ++ +       +       E+ V +     
Sbjct: 27  YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN-- 84

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                 + V  R  F   N + +V   +   S  D +  +         +    + +L++
Sbjct: 85  ----HPNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKA 140

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H +  +H  +K  +IL+             S  G+           + L    S  
Sbjct: 141 LDYIHHMGYVHRSVKASHILI-------------SVDGK-----------VYLSGLRSNL 176

Query: 242 --FDNQN--------HSSIVSTRHYRAPEVI--LGLGWSYPCDMWSVGCILVELCTGEAL 289
               +              V    + +PEV+     G+    D++SVG    EL  G   
Sbjct: 177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236

Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL 349
           F+     +   ++E+  G +P   +   S    +        +     +S     +  + 
Sbjct: 237 FKDMPATQ--MLLEKLNGTVPC--LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRP 292

Query: 350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
               +    +           +   L+ +P  R +A   LNH FF+ 
Sbjct: 293 SNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQ 339

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  109 bits (274), Expect = 2e-27
 Identities = 69/349 (19%), Positives = 117/349 (33%), Gaps = 102/349 (29%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVLQHLAKND 123
           +K    +GEG+F  V+   +  T    AIK++    I K         E DV+  L    
Sbjct: 32  FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL---- 87

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                H   V++   F     +           L  ++++     F     R +  +++ 
Sbjct: 88  ----DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGS--FDETCTRFYTAEIVS 141

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
           ++ Y+H   +IH DLKPENILL          +                  I++ DFG  
Sbjct: 142 ALEYLHGKGIIHRDLKPENILLNED------MH------------------IQITDFGTA 177

Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
              S        +S V T  Y +PE++         D+W++GCI+ +L  G   F    N
Sbjct: 178 KVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPF-RAGN 236

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
                            + ++  +            ++PE     +              
Sbjct: 237 --------------EYLIFQKIIKL---------EYDFPEK-FFPK-------------- 258

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQA------LNHPFFRNLN 398
                  AR     L+  LL  D ++RL   +         HPFF ++ 
Sbjct: 259 -------ARD----LVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 296

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  108 bits (272), Expect = 3e-27
 Identities = 69/341 (20%), Positives = 115/341 (33%), Gaps = 94/341 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDV---LQHLAK 121
            + ++  +GEG +G V    +R T+E VA+K+V   R       I  EI +   L H   
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH--- 64

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                  + V+        N   +  E   G  LFD ++ +     P    + F  QL+ 
Sbjct: 65  ------ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMA 116

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
            V Y+H + + H D+KPEN+LL   +                         +K+ DFG +
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERD------------------------NLKISDFGLA 152

Query: 240 TAFDNQNHSSIVSTR----HYRAPEVILGLGWS-YPCDMWSVGCILVELCTGEALFQTHE 294
           T F   N   +++       Y APE++    +   P D+WS G +L  +  GE  +    
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212

Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
           +                           K +        P   +    +           
Sbjct: 213 D--------------SCQEYSDWKEK--KTYLN------PWKKIDSAPL----------- 239

Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                          LLH +L  +PS R+T        ++ 
Sbjct: 240 --------------ALLHKILVENPSARITIPDIKKDRWYN 266

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  108 bits (273), Expect = 7e-27
 Identities = 74/334 (22%), Positives = 116/334 (34%), Gaps = 80/334 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           RY  +  +G G FG      D+ T+E VA+K +       +    EI   + L       
Sbjct: 21  RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRH----- 75

Query: 127 SSHCVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
             + V+ +       H+ I+ E   G  L++ +       F  D  R F +QLL  V+Y 
Sbjct: 76  -PNIVRFKEVILTPTHLAIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYC 132

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
           H +++ H DLK EN LL  S   +                      +K+ DFG +     
Sbjct: 133 HSMQICHRDLKLENTLLDGSPAPR----------------------LKICDFGYSKSSVL 170

Query: 246 NH--SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
           +    S V T  Y APEV+L   +     D+WS G  L  +  G   F+           
Sbjct: 171 HSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFED----PEEPRD 226

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGA-VSRESIKAVKKLDRLKNMVSLHVD 361
            R         I+R      KY       + P+   +S E                    
Sbjct: 227 YRKT-------IQRILSV--KY-------SIPDDIRISPE-------------------- 250

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                   L+  +   DP+ R++  +   H +F 
Sbjct: 251 -CC----HLISRIFVADPATRISIPEIKTHSWFL 279

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score =  107 bits (269), Expect = 1e-26
 Identities = 61/344 (17%), Positives = 119/344 (34%), Gaps = 95/344 (27%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKG 125
            + + ++G G +G V +     + + +A+K +R+    ++   +  ++D+          
Sbjct: 9   LEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVD---- 64

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVA 183
                V           + I  E +  SL  F K+  +K    P D++ +    +++++ 
Sbjct: 65  -CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALE 123

Query: 184 YMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
           ++H  L +IH D+KP N+L+             ++ G+           +K+ DFG +  
Sbjct: 124 HLHSKLSVIHRDVKPSNVLI-------------NALGQ-----------VKMCDFGISG- 158

Query: 243 DNQNHSSI-----VSTRHYRAPEVILG----LGWSYPCDMWSVGCILVELCTGEALFQTH 293
                  +        + Y APE I       G+S   D+WS+G  ++EL      + + 
Sbjct: 159 --YLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW 216

Query: 294 EN-LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL 352
               + L  +     P P                   +L  P    S E           
Sbjct: 217 GTPFQQLKQVVE--EPSP-------------------QL--PADKFSAE----------- 242

Query: 353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                           D     L+ +  ER T  + + HPFF  
Sbjct: 243 --------------FVDFTSQCLKKNSKERPTYPELMQHPFFTL 272

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  106 bits (267), Expect = 3e-26
 Identities = 69/343 (20%), Positives = 115/343 (33%), Gaps = 98/343 (28%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDV---LQHLAK 121
            + ++  +GEG +G V    +R T+E VA+K+V   R       I  EI +   L H   
Sbjct: 8   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNH--- 64

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                  + V+        N   +  E   G  LFD ++ +     P    + F  QL+ 
Sbjct: 65  ------ENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMA 116

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
            V Y+H + + H D+KPEN+LL   +                         +K+ DFG +
Sbjct: 117 GVVYLHGIGITHRDIKPENLLLDERD------------------------NLKISDFGLA 152

Query: 240 TAFDNQNHSSIVSTR----HYRAPEVILGLGWSY---PCDMWSVGCILVELCTGEALFQT 292
           T F   N   +++       Y APE++      +   P D+WS G +L  +  GE  +  
Sbjct: 153 TVFRYNNRERLLNKMCGTLPYVAPELLKRRE--FHAEPVDVWSCGIVLTAMLAGELPWDQ 210

Query: 293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL 352
             +                           K +        P   +    +         
Sbjct: 211 PSD--------------SCQEYSDWKEK--KTYLN------PWKKIDSAPL--------- 239

Query: 353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                            LLH +L  +PS R+T        ++ 
Sbjct: 240 ----------------ALLHKILVENPSARITIPDIKKDRWYN 266

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  105 bits (265), Expect = 4e-26
 Identities = 85/347 (24%), Positives = 126/347 (36%), Gaps = 96/347 (27%)

Query: 59  NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVL 116
           NL  +    +  L K+G+G+FG V +  D +TQ+ VAIK++       +   I  EI VL
Sbjct: 15  NLKADPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 74

Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFG 175
                     S +  +    +     + I+ E L G S  D L+     P     +    
Sbjct: 75  SQCD------SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATIL 125

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           R++L+ + Y+H  + IH D+K  N+LL             S  GE           +KL 
Sbjct: 126 REILKGLDYLHSEKKIHRDIKAANVLL-------------SEHGE-----------VKLA 161

Query: 236 DFGSTAFDNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA-LFQ 291
           DFG             + V T  + APEVI    +    D+WS+G   +EL  GE    +
Sbjct: 162 DFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSE 221

Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWP---EGAVSRESIKAVKK 348
            H       M  + L      +I +               N P   EG  S+        
Sbjct: 222 LH------PM--KVL-----FLIPK---------------NNPPTLEGNYSKP------- 246

Query: 349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
              LK  V                  L  +PS R TA++ L H F  
Sbjct: 247 ---LKEFVEA---------------CLNKEPSFRPTAKELLKHKFIL 275

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  105 bits (265), Expect = 4e-26
 Identities = 68/348 (19%), Positives = 128/348 (36%), Gaps = 104/348 (29%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAM---IEIDVLQHLAK 121
           +Y +   +GEG++G+V E  D +T  R A+K++  + +R+  +       EI +L+ L  
Sbjct: 6   KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRH 65

Query: 122 NDKGGSSHCVQIRN--WFDYRNHICIVFE--KLGPS-LFDFLKRNKYCPFPVDLVREFGR 176
                  + +Q+ +  + + +  + +V E    G   + D +   +   FPV     +  
Sbjct: 66  ------KNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR---FPVCQAHGYFC 116

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           QL++ + Y+H   ++H D+KP N+LL +                           +K+  
Sbjct: 117 QLIDGLEYLHSQGIVHKDIKPGNLLLTTGG------------------------TLKISA 152

Query: 237 FG-STAFDNQNHSSIVSTR----HYRAPEVILGLGWSY---PCDMWSVGCILVELCTGEA 288
            G + A           T      ++ PE+  GL  ++     D+WS G  L  + TG  
Sbjct: 153 LGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLD-TFSGFKVDIWSAGVTLYNITTGLY 211

Query: 289 LFQTHENLEHL-AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
            F+  +N+  L   + +    +P                                   + 
Sbjct: 212 PFE-GDNIYKLFENIGKGSYAIPGDC-------------------------GPP----LS 241

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
            L  LK M                   L Y+P++R + RQ   H +FR
Sbjct: 242 DL--LKGM-------------------LEYEPAKRFSIRQIRQHSWFR 268

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  105 bits (263), Expect = 1e-25
 Identities = 70/342 (20%), Positives = 120/342 (35%), Gaps = 87/342 (25%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKG 125
            K L ++G G +G V +   + + + +A+K +RS    ++   +  ++DV+   +     
Sbjct: 24  LKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSD---- 79

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYC---PFPVDLVREFGRQLLESV 182
              + VQ            I  E +  S   F K          P +++ +     ++++
Sbjct: 80  -CPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKAL 138

Query: 183 AYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
            ++ + L++IH D+KP NILL               SG            IKL DFG + 
Sbjct: 139 NHLKENLKIIHRDIKPSNILL-------------DRSGN-----------IKLCDFGISG 174

Query: 242 --FDNQNHSSIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILVELCTGEA-LFQTHE 294
              D+   +     R Y APE I       G+    D+WS+G  L EL TG     + + 
Sbjct: 175 QLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNS 234

Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
             + L  + +  G  P+                     +     S              N
Sbjct: 235 VFDQLTQVVK--GDPPQ-------------LSNSEEREF-----SPS----------FIN 264

Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
            V+L                L  D S+R   ++ L HPF   
Sbjct: 265 FVNL---------------CLTKDESKRPKYKELLKHPFILM 291

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  104 bits (261), Expect = 1e-25
 Identities = 47/250 (18%), Positives = 90/250 (36%), Gaps = 57/250 (22%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMIEIDVLQHLAKNDK 124
           +Y +  ++G+G++G V   ++       A+KV+  + + +               A    
Sbjct: 14  QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73

Query: 125 GGSS-------------------HCVQIRNWFDY--RNHICIVFEKL-GPSLFDFLKRNK 162
                                  + V++    D    +H+ +VFE +    + +      
Sbjct: 74  IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK- 132

Query: 163 YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP 222
             P   D  R + + L++ + Y+H  ++IH D+KP N+L+                G   
Sbjct: 133 --PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLV-------------GEDGH-- 175

Query: 223 FRCLPKSSAIKLIDFG-STAFDNQNH--SSIVSTRHYRAPEVILGLGWSY---PCDMWSV 276
                    IK+ DFG S  F   +   S+ V T  + APE +      +     D+W++
Sbjct: 176 ---------IKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAM 226

Query: 277 GCILVELCTG 286
           G  L     G
Sbjct: 227 GVTLYCFVFG 236

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  106 bits (265), Expect = 3e-25
 Identities = 75/341 (21%), Positives = 123/341 (36%), Gaps = 98/341 (28%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVV--RSIRKYRDAAMI--EIDVLQ---HL 119
            Y +   +G GTFG+V       T  +VA+K++  + IR       I  EI  L+   H 
Sbjct: 17  HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRH- 75

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    H +++       + I +V E + G  LFD++ +N          R   +Q+
Sbjct: 76  --------PHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQI 125

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L  V Y H   ++H DLKPEN+LL +                            K+ DFG
Sbjct: 126 LSGVDYCHRHMVVHRDLKPENVLLDAHM------------------------NAKIADFG 161

Query: 239 STAFDNQNH--SSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHEN 295
            +   +      +   + +Y APEVI G  ++ P  D+WS G IL  L  G   F   ++
Sbjct: 162 LSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFD-DDH 220

Query: 296 LEHL-AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
           +  L   +   +   P+++                         +   I           
Sbjct: 221 VPTLFKKICDGIFYTPQYL-------------------------NPSVI----------- 244

Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                          LL  +L+ DP +R T +    H +F+
Sbjct: 245 --------------SLLKHMLQVDPMKRATIKDIREHEWFK 271

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  105 bits (263), Expect = 8e-25
 Identities = 77/345 (22%), Positives = 127/345 (36%), Gaps = 95/345 (27%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKND 123
           Y++L   G+G FG V  C  R T +  A K +       RK    A+ E  +L+ +    
Sbjct: 189 YRVL---GKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKV---- 241

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
               +    V +   ++ ++ +C+V   + G  L   +       FP      +  ++  
Sbjct: 242 ----NSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
            +  +H  R+++ DLKPENILL         G+                  I++ D G  
Sbjct: 298 GLEDLHRERIVYRDLKPENILLDDH------GH------------------IRISDLGLA 333

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
               + Q     V T  Y APEV+    +++  D W++GC+L E+  G++ FQ  +    
Sbjct: 334 VHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK--- 390

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
                       E + R      E+Y          E   S ++                
Sbjct: 391 --------KIKREEVERLVKEVPEEY---------SER-FSPQAR--------------- 417

Query: 359 HVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                      L   LL  DP+ERL     +AR+   HP F+ LN
Sbjct: 418 ----------SLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLN 452

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score =  102 bits (255), Expect = 1e-24
 Identities = 58/230 (25%), Positives = 94/230 (40%), Gaps = 40/230 (17%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDKG 125
            + L +MG GT G+V +   R+T   +A+K +R      +   I  ++DV+         
Sbjct: 27  LENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHD---- 82

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
              + VQ    F     + I  E +G       KR +  P P  ++ +    +++++ Y+
Sbjct: 83  -CPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQG-PIPERILGKMTVAIVKALYYL 140

Query: 186 HD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA--F 242
            +   +IH D+KP NILL                G+           IKL DFG +    
Sbjct: 141 KEKHGVIHRDVKPSNILL-------------DERGQ-----------IKLCDFGISGRLV 176

Query: 243 DNQNHSSIVSTRHYRAPEVI-----LGLGWSYPCDMWSVGCILVELCTGE 287
           D++          Y APE I         +    D+WS+G  LVEL TG+
Sbjct: 177 DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  101 bits (253), Expect = 2e-24
 Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 40/232 (17%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHL 119
            +   +Y    K+G+G  G V    D  T + VAI+ + ++++     +I  EI V++  
Sbjct: 16  GDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQM-NLQQQPKKELIINEILVMREN 74

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                  + + V   + +   + + +V E L G SL D +            +    R+ 
Sbjct: 75  K------NPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCREC 125

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L+++ ++H  ++IH D+K +NILL                G            +KL DFG
Sbjct: 126 LQALEFLHSNQVIHRDIKSDNILL-------------GMDGS-----------VKLTDFG 161

Query: 239 STA---FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
             A    +    S++V T ++ APEV+    +    D+WS+G + +E+  GE
Sbjct: 162 FCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGE 213

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  101 bits (255), Expect = 2e-24
 Identities = 69/343 (20%), Positives = 126/343 (36%), Gaps = 96/343 (27%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVLQHLAKND 123
           +  +  +G G+FGRV+    +++    A+K++    + K +     + E  +LQ +    
Sbjct: 43  FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV---- 98

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
               +    V++   F   +++ +V E   G  +F  L+R     F     R +  Q++ 
Sbjct: 99  ----NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVL 152

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           +  Y+H L LI+ DLKPEN+L+         GY                  I++ DFG  
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQ------GY------------------IQVTDFGFA 188

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                   ++  T    APE+IL  G++   D W++G ++ E+  G   F   +      
Sbjct: 189 KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF-FADQ----- 242

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
                    P  +  +   G         ++ +P                        H 
Sbjct: 243 ---------PIQIYEKIVSG---------KVRFPS-----------------------HF 261

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQA-----LNHPFFRNLN 398
                 L DLL  LL+ D ++R    +       NH +F   +
Sbjct: 262 SSD---LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  102 bits (256), Expect = 2e-24
 Identities = 71/356 (19%), Positives = 132/356 (37%), Gaps = 95/356 (26%)

Query: 57  VFNLGENLTPR-YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MI 111
           VF+  E++    ++IL  +G+G+FG+V       T++  A+K +      +  +      
Sbjct: 5   VFDENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFK 64

Query: 112 EIDVLQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPV 168
           E+ ++Q L         H   V +   F     + +V +  LG  L   L++N +  F  
Sbjct: 65  ELQIMQGL--------EHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH--FKE 114

Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
           + V+ F  +L+ ++ Y+ + R+IH D+KP+NILL         G+               
Sbjct: 115 ETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEH------GH--------------- 153

Query: 229 SSAIKLIDFG--STAFDNQNHSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVEL 283
              + + DF   +        +++  T+ Y APE+     G G+S+  D WS+G    EL
Sbjct: 154 ---VHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYEL 210

Query: 284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESI 343
             G   +    +     ++                            + +P  A S+E +
Sbjct: 211 LRGRRPYHIRSSTSSKEIVH---------TFETT------------VVTYPS-AWSQEMV 248

Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL-TARQALNHPFFRNLN 398
                                     LL  LL  +P +R        N P+  ++N
Sbjct: 249 -------------------------SLLKKLLEPNPDQRFSQLSDVQNFPYMNDIN 279

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  103 bits (259), Expect = 3e-24
 Identities = 71/345 (20%), Positives = 129/345 (37%), Gaps = 95/345 (27%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SI--RKYRDAAMIEIDVLQHLAKND 123
           ++I+   G G FG V  C    T +  A+K +    I  ++    A+ E  +L  ++  D
Sbjct: 194 HRII---GRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGD 250

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                    V +   F   + +  + + + G  L   L ++    F    +R +  +++ 
Sbjct: 251 -----CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIIL 303

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-S 239
            + +MH+  +++ DLKP NILL         G+                  +++ D G +
Sbjct: 304 GLEHMHNRFVVYRDLKPANILLDEH------GH------------------VRISDLGLA 339

Query: 240 TAFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
             F  +   + V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+  + 
Sbjct: 340 CDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK 399

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
             +    L                +          P+   S E                 
Sbjct: 400 HEIDRMTL------------TMAVEL---------PDS-FSPELR--------------- 422

Query: 359 HVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                      LL GLL+ D + RL      A++    PFFR+L+
Sbjct: 423 ----------SLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 457

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  100 bits (252), Expect = 3e-24
 Identities = 52/232 (22%), Positives = 104/232 (44%), Gaps = 40/232 (17%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHL 119
            +         K+GEG+ G V    ++ +  +VA+K++  +RK +   ++  E+ +++  
Sbjct: 41  GDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMM-DLRKQQRRELLFNEVVIMRDY 99

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                    + V++   +     + ++ E L G +L D + +        + +      +
Sbjct: 100 Q------HFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV---RLNEEQIATVCEAV 150

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           L+++AY+H   +IH D+K ++ILL             +  G            +KL DFG
Sbjct: 151 LQALAYLHAQGVIHRDIKSDSILL-------------TLDGR-----------VKLSDFG 186

Query: 239 STA---FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
             A    D     S+V T ++ APEVI    ++   D+WS+G +++E+  GE
Sbjct: 187 FCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGE 238

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 99.3 bits (248), Expect = 7e-24
 Identities = 72/349 (20%), Positives = 121/349 (34%), Gaps = 90/349 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDK 124
            Y++   +G G    V   +    +E+VAIK +   +       +  EI  +        
Sbjct: 16  DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH---- 71

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE------FGRQ 177
               + V     F  ++ + +V + L G S+ D +K           V +        R+
Sbjct: 72  --HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +LE + Y+H    IH D+K  NILL                G            +++ DF
Sbjct: 130 VLEGLEYLHKNGQIHRDVKAGNILL-------------GEDGS-----------VQIADF 165

Query: 238 GSTAF--------DNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEA 288
           G +AF         N+   + V T  + APEV+    G+ +  D+WS G   +EL TG A
Sbjct: 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAA 225

Query: 289 -LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
              +         M  + L    ++       G +          +      +       
Sbjct: 226 PYHKYP------PM--KVLMLTLQNDPPSLETGVQDKEMLK---KY-----GKS------ 263

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                + M+SL                L+ DP +R TA + L H FF+ 
Sbjct: 264 ----FRKMISL---------------CLQKDPEKRPTAAELLRHKFFQK 293

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  101 bits (253), Expect = 8e-24
 Identities = 73/354 (20%), Positives = 120/354 (33%), Gaps = 104/354 (29%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVLQHLAKND 123
           ++IL  +G G F  V     +QT +  A+K++    + K  + +    E DVL +     
Sbjct: 63  FEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVN----- 117

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                     Q+   F   N++ +V E   G  L   L +      P ++ R +  +++ 
Sbjct: 118 ---GDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER-IPAEMARFYLAEIVM 173

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           ++  +H L  +H D+KP+NILL         G+                  I+L DFGS 
Sbjct: 174 AIDSVHRLGYVHRDIKPDNILLDRC------GH------------------IRLADFGSC 209

Query: 241 AFDNQNH----SSIVSTRHYRAPEVILGLGWSY-------PCDMWSVGCILVELCTGEAL 289
                +        V T  Y +PE++  +G           CD W++G    E+  G+  
Sbjct: 210 LKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTP 269

Query: 290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEG--AVSRESIKAVK 347
           F   ++        + +                        L+ P     V  E      
Sbjct: 270 F-YADSTA--ETYGKIV-------------------HYKEHLSLPLVDEGVPEE------ 301

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL---NHPFFRNLN 398
                          AR    D +  LL   P  RL    A     HPFF  L+
Sbjct: 302 ---------------AR----DFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLD 335

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score = 99.4 bits (248), Expect = 1e-23
 Identities = 60/248 (24%), Positives = 104/248 (41%), Gaps = 38/248 (15%)

Query: 44  SPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR 103
           +PPRR   +         +     + +L K+GEG++G V +   ++T + VAIK V  + 
Sbjct: 9   NPPRRQLKKLDEDSLT--KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQV-PVE 65

Query: 104 KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK 162
                 + EI ++Q         S H V+    +     + IV E     S+ D ++   
Sbjct: 66  SDLQEIIKEISIMQQCD------SPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN 119

Query: 163 YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP 222
                 D +    +  L+ + Y+H +R IH D+K  NILL             ++ G   
Sbjct: 120 -KTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL-------------NTEGH-- 163

Query: 223 FRCLPKSSAIKLIDFGSTAFDNQNHS---SIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 279
                     KL DFG         +   +++ T  + APEVI  +G++   D+WS+G  
Sbjct: 164 ---------AKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGIT 214

Query: 280 LVELCTGE 287
            +E+  G+
Sbjct: 215 AIEMAEGK 222

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 98.9 bits (247), Expect = 1e-23
 Identities = 64/256 (25%), Positives = 105/256 (41%), Gaps = 48/256 (18%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++   +G G FG V +  W  +    VAIK + S    R A ++E+  L  +        
Sbjct: 11  EVEEVVGRGAFGVVCKAKWRAKD---VAIKQIES-ESERKAFIVELRQLSRV-------- 58

Query: 128 SH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFL-KRNKYCPFPVDLVREFGRQLLESVA 183
           +H   V++       N +C+V E   G SL++ L        +       +  Q  + VA
Sbjct: 59  NHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 116

Query: 184 YMHDLR---LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           Y+H ++   LIH DLKP N+LLV+   +                       +K+ DFG+ 
Sbjct: 117 YLHSMQPKALIHRDLKPPNLLLVAGGTV-----------------------LKICDFGTA 153

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                + ++   +  + APEV  G  +S  CD++S G IL E+ T    F          
Sbjct: 154 CDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI 213

Query: 301 MMERALG---PLPEHM 313
           M     G   PL +++
Sbjct: 214 MWAVHNGTRPPLIKNL 229

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 99.4 bits (248), Expect = 2e-23
 Identities = 65/263 (24%), Positives = 100/263 (38%), Gaps = 41/263 (15%)

Query: 32  HEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQ 91
            +GA              D       F   ++    +  L ++G G+FG V    D +  
Sbjct: 22  FQGAMDPMPAGGRAGSLKDPDVAELFFK--DDPEKLFSDLREIGHGSFGAVYFARDVRNS 79

Query: 92  ERVAIKVV--RSIRKYRDAAMI--EIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF 147
           E VAIK +     +       I  E+  LQ L         + +Q R  +   +   +V 
Sbjct: 80  EVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR------HPNTIQYRGCYLREHTAWLVM 133

Query: 148 EKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEF 207
           E    S  D L+ +K  P     +       L+ +AY+H   +IH D+K  NILL     
Sbjct: 134 EYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL----- 187

Query: 208 IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-- 265
                   S  G            +KL DFGS +      +S V T ++ APEVIL +  
Sbjct: 188 --------SEPGL-----------VKLGDFGSASIMAP-ANSFVGTPYWMAPEVILAMDE 227

Query: 266 -GWSYPCDMWSVGCILVELCTGE 287
             +    D+WS+G   +EL   +
Sbjct: 228 GQYDGKVDVWSLGITCIELAERK 250

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score = 99.5 bits (248), Expect = 7e-23
 Identities = 64/348 (18%), Positives = 112/348 (32%), Gaps = 98/348 (28%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKND 123
           +++L   G G FG V  C  + T +  A K +       RK    AM+E  +L  +    
Sbjct: 190 FRVL---GRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKV---- 242

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKR--NKYCPFPVDLVREFGRQL 178
                    V +   F+ +  +C+V   + G  +   +         F       +  Q+
Sbjct: 243 ----HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
           +  + ++H   +I+ DLKPEN+LL         G                   +++ D G
Sbjct: 299 VSGLEHLHQRNIIYRDLKPENVLLDDD------GN------------------VRISDLG 334

Query: 239 ---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
                            T  + APE++LG  + +  D +++G  L E+      F+    
Sbjct: 335 LAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGE 394

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
                          + + +R       Y         P+   S  S             
Sbjct: 395 -----------KVENKELKQRVLEQAVTY---------PDK-FSPASK------------ 421

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQA-----LNHPFFRNLN 398
                        D    LL+ DP +RL  R         HP FR+++
Sbjct: 422 -------------DFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS 456

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score = 96.2 bits (240), Expect = 1e-22
 Identities = 51/232 (21%), Positives = 103/232 (44%), Gaps = 43/232 (18%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--EIDVLQHLAKNDK 124
            ++I+ ++G+G FG+V +  +++T    A KV+   +   +      EI++L        
Sbjct: 20  VWEIVGELGDGAFGKVYKAKNKETGALAAAKVI-ETKSEEELEDYIVEIEILATCD---- 74

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
               + V++   + +   + I+ E   G ++   +            ++   RQ+LE++ 
Sbjct: 75  --HPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALN 131

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
           ++H  R+IH DLK  N+L+             +  G+           I+L DFG +A +
Sbjct: 132 FLHSKRIIHRDLKAGNVLM-------------TLEGD-----------IRLADFGVSAKN 167

Query: 244 NQNHS---SIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
            +      S + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 168 LKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIE 219

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score = 96.1 bits (240), Expect = 1e-22
 Identities = 73/350 (20%), Positives = 130/350 (37%), Gaps = 101/350 (28%)

Query: 66  PRYKI-----LSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVL 116
           P+Y +     L  +G G+FGRV     R      A+KV++   + + +       E  +L
Sbjct: 1   PKYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLML 60

Query: 117 QHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
             +        +H   +++   F     I ++ + + G  LF  L++++   FP  + + 
Sbjct: 61  SIV--------THPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQR--FPNPVAKF 110

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           +  ++  ++ Y+H   +I+ DLKPENILL  +      G+                  IK
Sbjct: 111 YAAEVCLALEYLHSKDIIYRDLKPENILLDKN------GH------------------IK 146

Query: 234 LIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
           + DFG   +      ++  T  Y APEV+    ++   D WS G ++ E+  G   F   
Sbjct: 147 ITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF-YD 205

Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
            N   +   E+         I  A             L +P    + +            
Sbjct: 206 SN--TMKTYEK---------ILNA------------ELRFPPF-FNED------------ 229

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                     +    DLL  L+  D S+RL           NHP+F+ + 
Sbjct: 230 ---------VK----DLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 266

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score = 96.3 bits (240), Expect = 1e-22
 Identities = 49/236 (20%), Positives = 101/236 (42%), Gaps = 44/236 (18%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
            ++++  +G GT+G+V +    +T +  AIKV+       +    EI++L+  +      
Sbjct: 25  IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH----- 79

Query: 127 SSHCVQ------IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
             +          +N     + + +V E     S+ D +K  K      + +    R++L
Sbjct: 80  HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
             ++++H  ++IH D+K +N+LL             + + E           +KL+DFG 
Sbjct: 140 RGLSHLHQHKVIHRDIKGQNVLL-------------TENAE-----------VKLVDFGV 175

Query: 240 TA---FDNQNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGE 287
           +A         ++ + T ++ APEVI         + +  D+WS+G   +E+  G 
Sbjct: 176 SAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGA 231

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score = 97.5 bits (243), Expect = 2e-22
 Identities = 73/350 (20%), Positives = 127/350 (36%), Gaps = 102/350 (29%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVLQHLAKND 123
           Y+++  +G G FG V     + T++  A+K++    + K  D+A    E D++       
Sbjct: 71  YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAF----- 125

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
              ++    VQ+   F    ++ +V E + G  L + +        P    R +  +++ 
Sbjct: 126 ---ANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVL 179

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           ++  +H +  IH D+KP+N+LL  S      G+                  +KL DFG+ 
Sbjct: 180 ALDAIHSMGFIHRDVKPDNMLLDKS------GH------------------LKLADFGTC 215

Query: 241 AFDNQNH----SSIVSTRHYRAPEVILGLGWSYP----CDMWSVGCILVELCTGEALFQT 292
              N+       + V T  Y +PEV+   G        CD WSVG  L E+  G+  F  
Sbjct: 216 MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF-Y 274

Query: 293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGA-VSRESIKAVKKLDR 351
            ++L                          K     + L +P+   +S+E          
Sbjct: 275 ADSLVGT---------------------YSKIMNHKNSLTFPDDNDISKE---------- 303

Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL---NHPFFRNLN 398
                      A+    +L+   L  D   RL          H FF+N  
Sbjct: 304 -----------AK----NLICAFLT-DREVRLGRNGVEEIKRHLFFKNDQ 337

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 93.9 bits (234), Expect = 5e-22
 Identities = 58/249 (23%), Positives = 91/249 (36%), Gaps = 57/249 (22%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQERVAIKVVRSIRKYRDAAMI-----EIDVLQHLAKN 122
            +   +G G FG+V    W       VA+K  R       +  I     E  +   L   
Sbjct: 10  TLEEIIGIGGFGKVYRAFWIGDE---VAVKAARHDPDEDISQTIENVRQEAKLFAML--- 63

Query: 123 DKGGSSH---------CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVR 172
                 H         C++         ++C+V E   G  L   L   +    P D++ 
Sbjct: 64  -----KHPNIIALRGVCLK-------EPNLCLVMEFARGGPLNRVLSGKR---IPPDILV 108

Query: 173 EFGRQLLESVAYMHD---LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
            +  Q+   + Y+HD   + +IH DLK  NIL+                 +        +
Sbjct: 109 NWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI----------------LQKVENGDLSN 152

Query: 230 SAIKLIDFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA 288
             +K+ DFG +  +      S      + APEVI    +S   D+WS G +L EL TGE 
Sbjct: 153 KILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEV 212

Query: 289 LFQTHENLE 297
            F+  + L 
Sbjct: 213 PFRGIDGLA 221

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score = 96.0 bits (239), Expect = 6e-22
 Identities = 68/350 (19%), Positives = 120/350 (34%), Gaps = 98/350 (28%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVLQHLAKND 123
           ++IL  +G G FG V     +   +  A+K++    + K  + A    E DVL +     
Sbjct: 76  FEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVN----- 130

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                      +   F   N++ +V +   G  L   L + +    P ++ R +  +++ 
Sbjct: 131 ---GDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDR-LPEEMARFYLAEMVI 186

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           ++  +H L  +H D+KP+NIL+  +      G+                  I+L DFGS 
Sbjct: 187 AIDSVHQLHYVHRDIKPDNILMDMN------GH------------------IRLADFGSC 222

Query: 241 AFDNQNH----SSIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILVELCTGEALFQ 291
               ++     S  V T  Y +PE++  +      +   CD WS+G  + E+  GE  F 
Sbjct: 223 LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF- 281

Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
             E+L       + +                       R  +P                 
Sbjct: 282 YAESLV--ETYGKIM-------------------NHKERFQFPT---------------- 304

Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL---NHPFFRNLN 398
                   V        DL+  L+      RL          HPFF  ++
Sbjct: 305 -------QVTDVSENAKDLIRRLIC-SREHRLGQNGIEDFKKHPFFSGID 346

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 92.8 bits (231), Expect = 2e-21
 Identities = 57/234 (24%), Positives = 87/234 (37%), Gaps = 42/234 (17%)

Query: 66  PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
           P +++  K+G G FG +    +  T E VAIK+     +      +E    + L      
Sbjct: 9   PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQ-LHLEYRFYKQLG----- 62

Query: 126 GSSHCVQIRNWF-DYRNHICIVFEKLGPSLFDFLKRNKYCP--FPVDLVREFGRQLLESV 182
                 Q+  +F     +  +V E LGPSL D       C   F +  V     QL+  +
Sbjct: 63  SGDGIPQVY-YFGPCGKYNAMVLELLGPSLEDLF---DLCDRTFSLKTVLMIAIQLISRM 118

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
            Y+H   LI+ D+KPEN L      I  PG K                 I +IDF  +  
Sbjct: 119 EYVHSKNLIYRDVKPENFL------IGRPGNKTQQV-------------IHIIDFALAKE 159

Query: 242 F-DNQNHSSI--------VSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           + D +    I          T  Y +    LG   S   D+ ++G + +    G
Sbjct: 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRG 213

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score = 92.7 bits (231), Expect = 3e-21
 Identities = 67/342 (19%), Positives = 123/342 (35%), Gaps = 94/342 (27%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKNDKGGSSH- 129
           G G++ +VL    ++T    A+KVV+    +  +  D    E  V +  +        H 
Sbjct: 18  GRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-------HP 70

Query: 130 -CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
             V + + F   + +  V E + G  L   ++R +    P +  R +  ++  ++ Y+H+
Sbjct: 71  FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHE 128

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDN 244
             +I+ DLK +N+LL S       G+                  IKL D+G         
Sbjct: 129 RGIIYRDLKLDNVLLDSE------GH------------------IKLTDYGMCKEGLRPG 164

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMER 304
              S+   T +Y APE++ G  + +  D W++G ++ E+  G + F              
Sbjct: 165 DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF-------------- 210

Query: 305 ALGPLPEHMIRRASRGTEKYFRR--GSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
               +            +  F+     ++  P   +S ++                    
Sbjct: 211 ---DIVGSSDNPDQNTEDYLFQVILEKQIRIPRS-LSVKAA------------------- 247

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQA------LNHPFFRNLN 398
                  +L   L  DP ERL             HPFFRN++
Sbjct: 248 ------SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 283

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 90.8 bits (226), Expect = 7e-21
 Identities = 48/255 (18%), Positives = 85/255 (33%), Gaps = 62/255 (24%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI--------EIDVLQHLA 120
           +   ++G+G FG V +    + +  VAIK +       +  MI        E+ ++ +L 
Sbjct: 22  EYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNL- 80

Query: 121 KNDKGGSSH---------CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL 170
                  +H                        +V E +    L+  L  +K  P    +
Sbjct: 81  -------NHPNIVKLYGLMHNP---------PRMVMEFVPCGDLYHRL-LDKAHPIKWSV 123

Query: 171 VREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
                  +   + YM +    ++H DL+  NI L S +                      
Sbjct: 124 KLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLD-------------------ENA 164

Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSY--PCDMWSVGCILVELCTG 286
               K+ DFG +     + S ++    + APE I     SY    D +S   IL  + TG
Sbjct: 165 PVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTG 224

Query: 287 EALFQTHENLEHLAM 301
           E  F   +   +  +
Sbjct: 225 EGPF---DEYSYGKI 236

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score = 92.0 bits (229), Expect = 1e-20
 Identities = 67/339 (19%), Positives = 124/339 (36%), Gaps = 88/339 (25%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKNDKGGSSH- 129
           G G++ +VL    ++T    A++VV+    +  +  D    E  V +  +        H 
Sbjct: 61  GRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN-------HP 113

Query: 130 -CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
             V + + F   + +  V E + G  L   ++R +    P +  R +  ++  ++ Y+H+
Sbjct: 114 FLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHE 171

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
             +I+ DLK +N+LL S   IKL  Y            + K      +  G T       
Sbjct: 172 RGIIYRDLKLDNVLLDSEGHIKLTDY-----------GMCKEG----LRPGDTT------ 210

Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALG 307
           S+   T +Y APE++ G  + +  D W++G ++ E+  G + F                 
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPF----------------- 253

Query: 308 PLPEHMIRRASRGTEKYFRR--GSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS 365
            +            +  F+     ++  P   +S ++                       
Sbjct: 254 DIVGSSDNPDQNTEDYLFQVILEKQIRIPRS-LSVKAA---------------------- 290

Query: 366 TLTDLLHGLLRYDPSERLTARQA------LNHPFFRNLN 398
               +L   L  DP ERL             HPFFRN++
Sbjct: 291 ---SVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD 326

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 92.2 bits (229), Expect = 2e-20
 Identities = 57/272 (20%), Positives = 105/272 (38%), Gaps = 57/272 (20%)

Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVRSIR--KYRDAAMIEIDV-- 115
           G+ +  +Y++   +  G  G +    DR    R V +K +      + +  AM E     
Sbjct: 75  GDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLA 134

Query: 116 -LQHLAKNDKGGSSHCVQIRNWFDYRNHIC-----IVFEKL-GPSLFDFLKRNKYCPFPV 168
            + H            VQI N+ ++ +        IV E + G SL     +      PV
Sbjct: 135 EVVH---------PSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPV 181

Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
                +  ++L +++Y+H + L++ DLKPENI+L   +                      
Sbjct: 182 AEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEEQ---------------------- 219

Query: 229 SSAIKLIDFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
              +KLID G  +  ++     +  T  ++APE++   G +   D+++VG  L  L    
Sbjct: 220 ---LKLIDLGAVSRINSFG--YLYGTPGFQAPEIVRT-GPTVATDIYTVGRTLAALTLDL 273

Query: 288 ALFQTHENLEHLAMMERALGPLP--EHMIRRA 317
                   ++ L   +  L        ++RRA
Sbjct: 274 PTR-NGRYVDGLPEDDPVLKTYDSYGRLLRRA 304

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score = 89.9 bits (224), Expect = 2e-20
 Identities = 78/349 (22%), Positives = 139/349 (39%), Gaps = 103/349 (29%)

Query: 69  KILSKMGEGTFGRVL---ECWDRQTQERVAIKVVRS---IRKYRDAA--MIEIDVLQHLA 120
           ++L  +G+G +G+V    +     T +  A+KV++    +R  +D A    E ++L+ + 
Sbjct: 20  ELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEV- 78

Query: 121 KNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQ 177
                   H   V +   F     + ++ E L G  LF  L+R     F  D    +  +
Sbjct: 79  -------KHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAE 129

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +  ++ ++H   +I+ DLKPENI+L         G+                  +KL DF
Sbjct: 130 ISMALGHLHQKGIIYRDLKPENIMLNHQ------GH------------------VKLTDF 165

Query: 238 G---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE 294
           G    +  D     +   T  Y APE+++  G +   D WS+G ++ ++ TG   F T E
Sbjct: 166 GLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF-TGE 224

Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
           N +    +++         I +             +LN P   +++E+            
Sbjct: 225 NRK--KTIDK---------ILKC------------KLNLPPY-LTQEAR----------- 249

Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                         DLL  LL+ + + RL      A +   HPFFR++N
Sbjct: 250 --------------DLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN 284

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score = 89.6 bits (223), Expect = 4e-20
 Identities = 68/337 (20%), Positives = 121/337 (35%), Gaps = 98/337 (29%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVLQHLAKNDKGGSSH- 129
           G+G+FG+V     ++T +  AIK ++   +    D    M+E  VL    +       H 
Sbjct: 26  GKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWE-------HP 78

Query: 130 -CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
               +   F  + ++  V E L G  L   ++      F +     +  +++  + ++H 
Sbjct: 79  FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHS 136

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDN 244
             +++ DLK +NILL         G+                  IK+ DFG        +
Sbjct: 137 KGIVYRDLKLDNILLDKD------GH------------------IKIADFGMCKENMLGD 172

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMER 304
              ++   T  Y APE++LG  +++  D WS G +L E+  G++ F              
Sbjct: 173 AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFH------------- 219

Query: 305 ALGPLPEHMIRRASRGTEKYFRR--GSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
                         +  E+ F         +P   + +E+                    
Sbjct: 220 -------------GQDEEELFHSIRMDNPFYPRW-LEKEAK------------------- 246

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQAL-NHPFFRNLN 398
                 DLL  L   +P +RL  R  +  HP FR +N
Sbjct: 247 ------DLLVKLFVREPEKRLGVRGDIRQHPLFREIN 277

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score = 89.6 bits (223), Expect = 4e-20
 Identities = 80/348 (22%), Positives = 132/348 (37%), Gaps = 103/348 (29%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVLQHLAKND 123
           +  L  +G+GTFG+V+   ++ T    A+K++R   I    + A  + E  VLQ+     
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQN----- 61

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
              + H     ++  F   + +C V E   G  LF  L R +   F  +  R +G +++ 
Sbjct: 62  ---TRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV--FTEERARFYGAEIVS 116

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-- 238
           ++ Y+H   +++ D+K EN++L         G+                  IK+ DFG  
Sbjct: 117 ALEYLHSRDVVYRDIKLENLMLDKD------GH------------------IKITDFGLC 152

Query: 239 -STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHEN 295
                D     +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE 
Sbjct: 153 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER 212

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
           L  L +ME      P  +                         S E+             
Sbjct: 213 LFELILMEEI--RFPRTL-------------------------SPEAK------------ 233

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                         LL GLL+ DP +RL      A++ + H FF ++N
Sbjct: 234 -------------SLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score = 90.6 bits (225), Expect = 5e-20
 Identities = 80/347 (23%), Positives = 129/347 (37%), Gaps = 104/347 (29%)

Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVLQHLAKNDKG 125
            L  +G+GTFG+V+   ++ T    A+K+++   I    + A  + E  VLQ+       
Sbjct: 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQN------- 204

Query: 126 GSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
            S H     ++  F   + +C V E   G  LF  L R +   F  D  R +G +++ ++
Sbjct: 205 -SRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSAL 261

Query: 183 AYMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG--- 238
            Y+H  + +++ DLK EN++L         G+                  IK+ DFG   
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKD------GH------------------IKITDFGLCK 297

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF--QTHENL 296
               D     +   T  Y APEV+    +    D W +G ++ E+  G   F  Q HE L
Sbjct: 298 EGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL 357

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
             L +ME      P  +                           E+              
Sbjct: 358 FELILMEEI--RFPRTL-------------------------GPEAK------------- 377

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                        LL GLL+ DP +RL      A++ + H FF  + 
Sbjct: 378 ------------SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIV 412

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 88.2 bits (219), Expect = 7e-20
 Identities = 53/234 (22%), Positives = 89/234 (38%), Gaps = 42/234 (17%)

Query: 66  PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
             YK+  ++GEG+FG + E  +    ++VAIK              E    + LA     
Sbjct: 10  VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRD-EYRTYKLLA----- 63

Query: 126 GSSHCVQIRNWF-DYRNHICIVFEKLGPSLFDFLKRNKYCP--FPVDLVREFGRQLLESV 182
           G +    +  +F     H  +V + LGPSL D L     C   F V  V    +Q+L  V
Sbjct: 64  GCTGIPNVY-YFGQEGLHNVLVIDLLGPSLEDLL---DLCGRKFSVKTVAMAAKQMLARV 119

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
             +H+  L++ D+KP+N L                   +       ++ I ++DFG    
Sbjct: 120 QSIHEKSLVYRDIKPDNFL-------------------IGRPNSKNANMIYVVDFGMVKF 160

Query: 242 F-DNQNHS--------SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           + D             ++  T  Y +    LG   S   D+ ++G + +    G
Sbjct: 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRG 214

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score = 89.2 bits (222), Expect = 7e-20
 Identities = 83/361 (22%), Positives = 131/361 (36%), Gaps = 106/361 (29%)

Query: 59  NLGENLTPRYKI-----LSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA-- 109
           NLG +  P  K      L  +G+G+FG+VL    +  +   A+KV++  +I K ++    
Sbjct: 26  NLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHI 85

Query: 110 MIEIDVLQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPF 166
           M E +VL    K       H   V +   F   + +  V + + G  LF  L+R +   F
Sbjct: 86  MSERNVLLKNVK-------HPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERC--F 136

Query: 167 PVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL 226
                R +  ++  ++ Y+H L +++ DLKPENILL S       G+             
Sbjct: 137 LEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQ------GH------------- 177

Query: 227 PKSSAIKLIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL 283
                I L DFG        N   S+   T  Y APEV+    +    D W +G +L E+
Sbjct: 178 -----IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEM 232

Query: 284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRR--GSRLNWPEGAVSRE 341
             G   F                           SR T + +       L      ++  
Sbjct: 233 LYGLPPFY--------------------------SRNTAEMYDNILNKPLQLKPN-ITNS 265

Query: 342 SIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL----TARQALNHPFFRNL 397
           +                           LL GLL+ D ++RL       +  +H FF  +
Sbjct: 266 AR-------------------------HLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI 300

Query: 398 N 398
           N
Sbjct: 301 N 301

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 88.6 bits (220), Expect = 9e-20
 Identities = 50/247 (20%), Positives = 87/247 (35%), Gaps = 53/247 (21%)

Query: 66  PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
            ++ +  K+G G FG +   +     E+ A  VV+   +       E+   Q +AK D  
Sbjct: 37  NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCI 96

Query: 126 GSSHCVQIRN--------WF--------DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVD 169
                 +  +                   YR    +V E+LG  L     +N    F   
Sbjct: 97  KKWIERKQLDYLGIPLFYGSGLTEFKGRSYR---FMVMERLGIDLQKISGQNG--TFKKS 151

Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
            V + G ++L+ + Y+H+   +H D+K  N+LL         GYK               
Sbjct: 152 TVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL---------GYK-------------NP 189

Query: 230 SAIKLIDFG-STAF-DNQNH--------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 279
             + L D+G S  +  N NH             T  + + +   G+  S   D+  +G  
Sbjct: 190 DQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYC 249

Query: 280 LVELCTG 286
           ++    G
Sbjct: 250 MLRWLCG 256

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score = 88.5 bits (220), Expect = 1e-19
 Identities = 71/348 (20%), Positives = 126/348 (36%), Gaps = 105/348 (30%)

Query: 75  GEGTFGRVL---ECWDRQTQERVAIKVVRS---IRKYRDAA--MIEIDVLQHLAKNDKGG 126
           G G +G+V    +     T +  A+KV++    ++K +       E  VL+H        
Sbjct: 63  GTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH-------- 114

Query: 127 SSHC---VQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                  V +   F     + ++ + + G  LF  L + +   F    V+ +  +++ ++
Sbjct: 115 IRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRER--FTEHEVQIYVGEIVLAL 172

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---- 238
            ++H L +I+ D+K ENILL S+      G+                  + L DFG    
Sbjct: 173 EHLHKLGIIYRDIKLENILLDSN------GH------------------VVLTDFGLSKE 208

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILVELCTGEALFQT-HEN 295
             A + +       T  Y AP+++ G   G     D WS+G ++ EL TG + F    E 
Sbjct: 209 FVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEK 268

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
                +  R         I ++               +P+  +S  +             
Sbjct: 269 NSQAEISRR---------ILKS------------EPPYPQE-MSALAK------------ 294

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                        DL+  LL  DP +RL      A +   H FF+ +N
Sbjct: 295 -------------DLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 329

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score = 89.7 bits (222), Expect = 2e-19
 Identities = 63/345 (18%), Positives = 122/345 (35%), Gaps = 96/345 (27%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKND 123
           +  L  +G+G+FG+V+    + T E  A+K+++          +  M+E  VL    K  
Sbjct: 343 FNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK-- 400

Query: 124 KGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                     Q+ + F   + +  V E + G  L   +++     F       +  ++  
Sbjct: 401 -----PPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAI 453

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            + ++    +I+ DLK +N++L S   IK+  +            + K +    I  G T
Sbjct: 454 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADF-----------GMCKEN----IWDGVT 498

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                   +   T  Y APE+I    +    D W+ G +L E+  G+A F+         
Sbjct: 499 T------KTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE--------- 543

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRR--GSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
                                ++ F+      + +P+  +S+E++               
Sbjct: 544 -----------------GEDEDELFQSIMEHNVAYPKS-MSKEAV--------------- 570

Query: 359 HVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                      +  GL+   P +RL       R    H FFR ++
Sbjct: 571 ----------AICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 605

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score = 87.3 bits (217), Expect = 3e-19
 Identities = 65/342 (19%), Positives = 124/342 (36%), Gaps = 103/342 (30%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVLQHLAKNDKGGSSH- 129
           G+G+FG+V+    ++T +  A+KV++   I +  D    M E  +L            H 
Sbjct: 32  GKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN-------HP 84

Query: 130 -CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
              Q+   F   + +  V E + G  L   +++++   F     R +  +++ ++ ++HD
Sbjct: 85  FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHD 142

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDN 244
             +I+ DLK +N+LL         G+                   KL DFG       + 
Sbjct: 143 KGIIYRDLKLDNVLLDHE------GH------------------CKLADFGMCKEGICNG 178

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL--AMM 302
              ++   T  Y APE++  + +    D W++G +L E+  G A F   EN + L  A++
Sbjct: 179 VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPF-EAENEDDLFEAIL 237

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
              +   P  +                           ++                    
Sbjct: 238 NDEV-VYPTWL-------------------------HEDAT------------------- 252

Query: 363 ARSTLTDLLHGLLRYDPSERL------TARQALNHPFFRNLN 398
                  +L   +  +P+ RL           L HPFF+ ++
Sbjct: 253 ------GILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEID 288

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score = 87.3 bits (217), Expect = 3e-19
 Identities = 68/341 (19%), Positives = 123/341 (36%), Gaps = 102/341 (29%)

Query: 75  GEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAA--MIEIDVLQHLAKNDKGGSSH- 129
           G+G+FG+V+    + T E  A+K+++   + +  D    M+E  VL    K         
Sbjct: 29  GKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGK-------PP 81

Query: 130 -CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
              Q+ + F   + +  V E + G  L   +++     F       +  ++   + ++  
Sbjct: 82  FLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQS 139

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---STAFDN 244
             +I+ DLK +N++L S       G+                  IK+ DFG      +D 
Sbjct: 140 KGIIYRDLKLDNVMLDSE------GH------------------IKIADFGMCKENIWDG 175

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL--AMM 302
               +   T  Y APE+I    +    D W+ G +L E+  G+A F   E+ + L  ++M
Sbjct: 176 VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPF-EGEDEDELFQSIM 234

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
           E  +   P+ M                         S+E++                   
Sbjct: 235 EHNV-AYPKSM-------------------------SKEAV------------------- 249

Query: 363 ARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                  +  GL+   P +RL       R    H FFR ++
Sbjct: 250 ------AICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYID 284

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 85.9 bits (213), Expect = 4e-19
 Identities = 56/232 (24%), Positives = 94/232 (40%), Gaps = 40/232 (17%)

Query: 66  PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
            RY++  K+G G+FG +    D    E VAIK+     K+    + E  + + +      
Sbjct: 9   NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHI-ESKIYKMM-----Q 62

Query: 126 GSSHCVQIRNWF-DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
           G      IR W     ++  +V E LGPSL D L       F +  V     Q++  + Y
Sbjct: 63  GGVGIPTIR-WCGAEGDYNVMVMELLGPSLED-LFNFCSRKFSLKTVLLLADQMISRIEY 120

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFD 243
           +H    IH D+KP+N L+         G  +            K + + +IDFG +  + 
Sbjct: 121 IHSKNFIHRDVKPDNFLM---------GLGK------------KGNLVYIIDFGLAKKYR 159

Query: 244 NQN---------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           +           + ++  T  Y +    LG+  S   D+ S+G +L+    G
Sbjct: 160 DARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLG 211

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 87.8 bits (217), Expect = 4e-19
 Identities = 55/232 (23%), Positives = 95/232 (40%), Gaps = 40/232 (17%)

Query: 66  PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
            ++++  K+G G+FG +    + QT E VAIK+     K+      E  + + L      
Sbjct: 7   NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLY-ESKIYRIL-----Q 60

Query: 126 GSSHCVQIRNWF-DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
           G +    +R WF    ++  +V + LGPSL D L         +  V     Q++  V +
Sbjct: 61  GGTGIPNVR-WFGVEGDYNVLVMDLLGPSLED-LFNFCSRKLSLKTVLMLADQMINRVEF 118

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-- 242
           +H    +H D+KP+N L+         G  R            +++ + +IDFG      
Sbjct: 119 VHSKSFLHRDIKPDNFLM---------GLGR------------RANQVYIIDFGLAKKYR 157

Query: 243 DNQNHS--------SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
           D   H         ++  T  Y +    LG+  S   D+ S+G +L+    G
Sbjct: 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRG 209

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score = 86.1 bits (214), Expect = 5e-19
 Identities = 80/362 (22%), Positives = 138/362 (38%), Gaps = 102/362 (28%)

Query: 55  HYVFNLGENLTPR-YKILSKMGEGTFGRVL---ECWDRQTQERVAIKVVR--SIRKYRDA 108
           H+V    E   P  +++L  +G+G+FG+V    +      ++  A+KV++  +++     
Sbjct: 12  HHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRV 71

Query: 109 -AMIEIDVLQHLAKNDKGGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYC 164
              +E D+L  +        +H   V++   F     + ++ + L G  LF  L +    
Sbjct: 72  RTKMERDILVEV--------NHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVM- 122

Query: 165 PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR 224
            F  + V+ +  +L  ++ ++H L +I+ DLKPENILL         G+           
Sbjct: 123 -FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEE------GH----------- 164

Query: 225 CLPKSSAIKLIDFG---STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILV 281
                  IKL DFG    +    +   S   T  Y APEV+   G +   D WS G ++ 
Sbjct: 165 -------IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMF 217

Query: 282 ELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRE 341
           E+ TG   FQ  +  E    M           I +A            +L  P+  +S E
Sbjct: 218 EMLTGTLPFQGKDRKE---TMTM---------ILKA------------KLGMPQF-LSPE 252

Query: 342 SIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRN 396
           +                           LL  L + +P+ RL        +   H FF  
Sbjct: 253 AQ-------------------------SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFST 287

Query: 397 LN 398
           ++
Sbjct: 288 ID 289

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 84.6 bits (210), Expect = 1e-18
 Identities = 56/240 (23%), Positives = 102/240 (42%), Gaps = 49/240 (20%)

Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS--------IRKYRDAAMIE 112
           G+ +  RYKI+ K+G G    V    D     +VAIK +          ++++       
Sbjct: 6   GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHN- 64

Query: 113 IDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLV 171
              L H          + V + +  +  +   +V E + GP+L ++++ +   P  VD  
Sbjct: 65  SSQLSH---------QNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTA 113

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
             F  Q+L+ + + HD+R++H D+KP+NIL+              S+             
Sbjct: 114 INFTNQILDGIKHAHDMRIVHRDIKPQNILI-------------DSNKT----------- 149

Query: 232 IKLIDFG-STAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           +K+ DFG + A         + ++ T  Y +PE   G       D++S+G +L E+  GE
Sbjct: 150 LKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGE 209

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 84.0 bits (208), Expect = 4e-18
 Identities = 39/252 (15%), Positives = 84/252 (33%), Gaps = 60/252 (23%)

Query: 66  PRYKILSKMGEGTFGRV--------LECWDRQTQERVAIKV-------VRSIRKY-RDAA 109
            ++K+ S       G +        L C     +++ ++K+             + R A 
Sbjct: 42  RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKDGRLFNEQNFFQRAAK 101

Query: 110 MIEIDVLQHLAKNDKGGSSHCVQIRNWF-----DYRNHICIVFEKLGPSLFDFLKRNKYC 164
            ++++  + L          C+     F      YR    +V   LG SL   L  +   
Sbjct: 102 PLQVNKWKKLYSTPLLAIPTCM----GFGVHQDKYR---FLVLPSLGRSLQSALDVSPKH 154

Query: 165 PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR 224
                 V +   +LL+++ ++H+   +H ++  ENI +                      
Sbjct: 155 VLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFV---------------------- 192

Query: 225 CLPKSSAIKLIDFG-STAF-DNQNH--------SSIVSTRHYRAPEVILGLGWSYPCDMW 274
                S + L  +G +  +  +  H        S       + + ++  G G S   D+ 
Sbjct: 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQ 252

Query: 275 SVGCILVELCTG 286
           S+G  +++   G
Sbjct: 253 SLGYCMLKWLYG 264

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 81.5 bits (202), Expect = 1e-17
 Identities = 54/242 (22%), Positives = 90/242 (37%), Gaps = 57/242 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS------------IRKYRDAAMIEID 114
            Y++   +G G  G V E  D   +  VA+K++               R+ R A      
Sbjct: 35  PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGR---- 90

Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
            LQ           H V I ++ +    + +    + G  L   L+R    P        
Sbjct: 91  -LQE---------PHVVPIHDFGEIDGQLYVDMRLINGVDLAAMLRRQG--PLAPPRAVA 138

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
             RQ+  ++   H     H D+KPENIL+ + +F                          
Sbjct: 139 IVRQIGSALDAAHAAGATHRDVKPENILVSADDF------------------------AY 174

Query: 234 LIDFG-STAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL 289
           L+DFG ++A  ++      + V T +Y APE       +Y  D++++ C+L E  TG   
Sbjct: 175 LVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPP 234

Query: 290 FQ 291
           +Q
Sbjct: 235 YQ 236

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 79.6 bits (197), Expect = 7e-17
 Identities = 54/255 (21%), Positives = 94/255 (36%), Gaps = 69/255 (27%)

Query: 59  NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRS--------IRKYRD--- 107
               +L+ RY++   +G G    V    D +    VA+KV+R+          ++R    
Sbjct: 5   TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64

Query: 108 -AAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-------RNHICIVFEKL-GPSLFDFL 158
            AA      L H            V +   +D             IV E + G +L D +
Sbjct: 65  NAAA-----LNH---------PAIVAV---YDTGEAETPAGPLPYIVMEYVDGVTLRDIV 107

Query: 159 KRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS 218
                 P       E      +++ + H   +IH D+KP NI++             S++
Sbjct: 108 HTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI-------------SAT 152

Query: 219 GEMPFRCLPKSSAIKLIDFG------STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCD 272
                        +K++DFG       +       ++++ T  Y +PE   G       D
Sbjct: 153 NA-----------VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201

Query: 273 MWSVGCILVELCTGE 287
           ++S+GC+L E+ TGE
Sbjct: 202 VYSLGCVLYEVLTGE 216

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 77.3 bits (191), Expect = 3e-16
 Identities = 40/252 (15%), Positives = 74/252 (29%), Gaps = 69/252 (27%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQERVAIKVV-------RSIRKYRDAAMIEIDVLQHLA 120
             L+K+ E   G + +  W       + +KV+       R  R + +    E   L+   
Sbjct: 13  NFLTKLNENHSGELWKGRWQGND---IVVKVLKVRDWSTRKSRDFNE----ECPRLRIF- 64

Query: 121 KNDKGGSSH---------CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL 170
                  SH         C           H  ++   +   SL++ L            
Sbjct: 65  -------SHPNVLPVLGACQS-----PPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQ 112

Query: 171 VREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
             +F   +   +A++H L   +    L   ++++                         +
Sbjct: 113 AVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID------------------------E 148

Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYP---CDMWSVGCILVELCT 285
               ++       F  Q+    +    + APE +            DMWS   +L EL T
Sbjct: 149 DMTARISMAD-VKFSFQS-PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVT 206

Query: 286 GEALFQTHENLE 297
            E  F    N+E
Sbjct: 207 REVPFADLSNME 218

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 76.6 bits (189), Expect = 7e-16
 Identities = 52/247 (21%), Positives = 91/247 (36%), Gaps = 51/247 (20%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQERVAIKVVRSIRKYRDAA---MIEIDVLQHLAKNDK 124
            I  K+G G+FG V    W       VA+K++     + +     + E+ +++ L     
Sbjct: 40  NIKEKIGAGSFGTVHRAEWHGSD---VAVKILMEQDFHAERVNEFLREVAIMKRL----- 91

Query: 125 GGSSH--CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY-CPFPVDLVREFGRQLLE 180
               H   V          ++ IV E L   SL+  L ++                 + +
Sbjct: 92  ---RHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAK 148

Query: 181 SVAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
            + Y+H+    ++H +LK  N+L+                         K   +K+ DFG
Sbjct: 149 GMNYLHNRNPPIVHRNLKSPNLLVD------------------------KKYTVKVCDFG 184

Query: 239 -STAFDNQNHS--SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
            S    +   S  S   T  + APEV+     +   D++S G IL EL T +  +    N
Sbjct: 185 LSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW---GN 241

Query: 296 LEHLAMM 302
           L    ++
Sbjct: 242 LNPAQVV 248

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 75.8 bits (187), Expect = 1e-15
 Identities = 51/250 (20%), Positives = 89/250 (35%), Gaps = 65/250 (26%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKG 125
            +  ++G G+FG V +         VA+K++       +   A   E+ VL+        
Sbjct: 27  TVGQRIGSGSFGTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKT------ 77

Query: 126 GSSH---------CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFG 175
              H                      + IV +   G SL+  L  ++   F +  + +  
Sbjct: 78  --RHVNILLFMGYSTA--------PQLAIVTQWCEGSSLYHHLHASE-TKFEMKKLIDIA 126

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           RQ    + Y+H   +IH DLK  NI L                         + + +K+ 
Sbjct: 127 RQTARGMDYLHAKSIIHRDLKSNNIFL------------------------HEDNTVKIG 162

Query: 236 DFG-----STAFDNQNHSSIVSTRHYRAPEVILGLGW---SYPCDMWSVGCILVELCTGE 287
           DFG     S    +     +  +  + APEVI        S+  D+++ G +L EL TG+
Sbjct: 163 DFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQ 222

Query: 288 ALFQTHENLE 297
             +    N +
Sbjct: 223 LPYSNINNRD 232

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 76.3 bits (188), Expect = 1e-15
 Identities = 49/278 (17%), Positives = 95/278 (34%), Gaps = 61/278 (21%)

Query: 44  SPPRRDDDREGHYV---FNLGENLT----PRYKILSKMGEGTFGRV-----LECWDRQTQ 91
           +           ++   F +GE +T      +K+   +G+G FG +            + 
Sbjct: 6   AAQAGRQSSAKRHLAEQFAVGEIITDMAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSD 65

Query: 92  ERVAIKVVRS--------IRKYRDAAMIE-IDVLQHLAKNDKGGSSHC----VQIRNWFD 138
               +KV  S        ++ Y+ AA  E I       K    G        +  +N   
Sbjct: 66  APCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLHDKNGKS 125

Query: 139 YRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPE 198
           YR    ++ ++ G  L    + N    F    V +   ++L+ + Y+H+   +H D+K  
Sbjct: 126 YR---FMIMDRFGSDLQKIYEANAKR-FSRKTVLQLSLRILDILEYIHEHEYVHGDIKAS 181

Query: 199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAF-DNQNH--------S 248
           N+LL          YK                 + L+D+G +  +     H         
Sbjct: 182 NLLL---------NYK-------------NPDQVYLVDYGLAYRYCPEGVHKAYAADPKR 219

Query: 249 SIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG 286
               T  + + +   G+  S   D+  +G  +++  TG
Sbjct: 220 CHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTG 257

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 75.1 bits (185), Expect = 2e-15
 Identities = 41/233 (17%), Positives = 85/233 (36%), Gaps = 40/233 (17%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI-EIDVLQHLAKNDKGGS 127
                +G+G FG+ ++   R+T E + +K +    +      + E+ V++ L        
Sbjct: 13  IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCL-------- 64

Query: 128 SH---------CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQ 177
            H           +          +  + E + G +L   +K      +P      F + 
Sbjct: 65  EHPNVLKFIGVLYK-------DKRLNFITEYIKGGTLRGIIKSMD-SQYPWSQRVSFAKD 116

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF---RCLPKSSAIKL 234
           +   +AY+H + +IH DL   N L+  ++ + +            F   R +        
Sbjct: 117 IASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVAD----------FGLARLMVDEKTQPE 166

Query: 235 IDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
                   D +   ++V   ++ APE+I G  +    D++S G +L E+    
Sbjct: 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRV 219

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 74.4 bits (183), Expect = 6e-15
 Identities = 58/312 (18%), Positives = 103/312 (33%), Gaps = 78/312 (25%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
            +   +G+G FG V    W     E VA+K+  S  +       EI     L        
Sbjct: 45  VLQESIGKGRFGEVWRGKWR---GEEVAVKIFSSREERSWFREAEIYQTVML-------- 93

Query: 128 SH-------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
            H           ++       + +V +  + G SLFD+L R       V+ + +     
Sbjct: 94  RHENILGFIAADNKD-NGTWTQLWLVSDYHEHG-SLFDYLNRY---TVTVEGMIKLALST 148

Query: 179 LESVAYMHDLRL--------IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
              +A++H   +         H DLK +NIL+                         K+ 
Sbjct: 149 ASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK------------------------KNG 184

Query: 231 AIKLIDFGSTAFDNQNHSSI-------VSTRHYRAPEVILGLGWSYP------CDMWSVG 277
              + D G     +    +I       V T+ Y APEV+               D++++G
Sbjct: 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMG 244

Query: 278 CILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGA 337
            +  E+    ++   HE+ +          P  E M +           +  R N P   
Sbjct: 245 LVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVC-------EQKLRPNIPNRW 297

Query: 338 VSRESIKAVKKL 349
            S E+++ + K+
Sbjct: 298 QSCEALRVMAKI 309

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 73.9 bits (182), Expect = 7e-15
 Identities = 44/274 (16%), Positives = 90/274 (32%), Gaps = 78/274 (28%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMI-----EIDVLQHLAKND 123
           +I   +G+G FG+V           VAI+++    +  +   +     E+   +      
Sbjct: 36  EIGELIGKGRFGQVYHGRWHGE---VAIRLID--IERDNEDQLKAFKREVMAYRQT---- 86

Query: 124 KGGSSH---------CVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
                H         C+          H+ I+     G +L+  ++  K     V+  R+
Sbjct: 87  ----RHENVVLFMGACMS-------PPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQ 134

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
             +++++ + Y+H   ++H DLK +N+   + +                         + 
Sbjct: 135 IAQEIVKGMGYLHAKGILHKDLKSKNVFYDNGK-------------------------VV 169

Query: 234 LIDFG-STAFDNQNHSSIVS-------TRHYRAPEVILGLGWSYP---------CDMWSV 276
           + DFG  +                      + APE+I  L               D++++
Sbjct: 170 ITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFAL 229

Query: 277 GCILVELCTGEALFQTHENLEHLAMMERALGPLP 310
           G I  EL   E  F+T      +  M   + P  
Sbjct: 230 GTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNL 263

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 73.6 bits (181), Expect = 1e-14
 Identities = 56/313 (17%), Positives = 102/313 (32%), Gaps = 80/313 (25%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA-KN---- 122
           +++ ++G+G +G V    W     E+VA+KV  +  +       EI     +  +N    
Sbjct: 40  QMVKQIGKGRYGEVWMGKWR---GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGF 96

Query: 123 ---DKGGSSHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
              D  G+    Q+           ++ +  + G SL+D+LK           + +    
Sbjct: 97  IAADIKGTGSWTQL----------YLITDYHENG-SLYDYLKST---TLDAKSMLKLAYS 142

Query: 178 LLESVAYMHDLRL--------IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
            +  + ++H             H DLK +NIL+  +                   C    
Sbjct: 143 SVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN-----------------GTC---- 181

Query: 230 SAIKLIDFG-STAFDNQNHSSIVS------TRHYRAPEVILGLGWSYP------CDMWSV 276
               + D G +  F +  +   +       T+ Y  PEV+               DM+S 
Sbjct: 182 ---CIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSF 238

Query: 277 GCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEG 336
           G IL E+          E  +          P  E M             +  R ++P  
Sbjct: 239 GLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVC-------IKKLRPSFPNR 291

Query: 337 AVSRESIKAVKKL 349
             S E ++ + KL
Sbjct: 292 WSSDECLRQMGKL 304

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 72.4 bits (178), Expect = 2e-14
 Identities = 56/313 (17%), Positives = 99/313 (31%), Gaps = 80/313 (25%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA-KN---- 122
            +L  +G+G +G V    W     E VA+K+  S  +       E+     L  +N    
Sbjct: 11  TLLECVGKGRYGEVWRGSWQ---GENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGF 67

Query: 123 ---DKGGSSHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
              D        Q+           ++    ++G SL+D+L+                  
Sbjct: 68  IASDMTSRHSSTQL----------WLITHYHEMG-SLYDYLQLT---TLDTVSCLRIVLS 113

Query: 178 LLESVAYMHDLRL--------IHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
           +   +A++H             H DLK +NIL+  +                  +C    
Sbjct: 114 IASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN-----------------GQC---- 152

Query: 230 SAIKLIDFGSTAFDNQNHSSI-------VSTRHYRAPEVILGLGWSYP------CDMWSV 276
               + D G     +Q+ + +       V T+ Y APEV+               D+W+ 
Sbjct: 153 ---CIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAF 209

Query: 277 GCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEG 336
           G +L E+          E+ +          P  E M +              R N P  
Sbjct: 210 GLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVC-------VDQQRPNIPNR 262

Query: 337 AVSRESIKAVKKL 349
             S  ++ ++ KL
Sbjct: 263 WFSDPTLTSLAKL 275

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336

 Score = 66.4 bits (161), Expect = 2e-12
 Identities = 53/256 (20%), Positives = 85/256 (33%), Gaps = 58/256 (22%)

Query: 65  TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---------SIRKYRDAAMIEIDV 115
           T + +   K+GEG FG V +     T   VAIK++          S +K  +  + EI +
Sbjct: 19  TEKLQRCEKIGEGVFGEVFQTIADHTP--VAIKIIAIEGPDLVNGSHQKTFEEILPEIII 76

Query: 116 LQHLAKNDKGG-----------SSHCVQ-------IRNWFDYRN---------------- 141
            + L+                 S HCVQ       ++ W  Y +                
Sbjct: 77  SKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQ 136

Query: 142 -HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPEN 199
             I + FE  G  L     +       +   +    QL  S+A     LR  H DL   N
Sbjct: 137 LFIVLEFEFGGIDLEQMRTKLS----SLATAKSILHQLTASLAVAEASLRFEHRDLHWGN 192

Query: 200 ILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAP 259
           +LL  +   KL       S  +P   L     + +ID+  +  +                
Sbjct: 193 VLLKKTSLKKLHYTLNGKSSTIPSCGL----QVSIIDYTLSRLERDGIVVFCDV--SMDE 246

Query: 260 EVILGLGWSYPCDMWS 275
           ++  G G  Y  D++ 
Sbjct: 247 DLFTGDG-DYQFDIYR 261

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 66.2 bits (162), Expect = 2e-12
 Identities = 54/263 (20%), Positives = 95/263 (36%), Gaps = 67/263 (25%)

Query: 69  KILSKMGEGTFGRVLE-------CWDRQTQERVAIKVVRSI-RKYRDAAMIEIDVLQHLA 120
                +G+GTF ++ +        + +  +  V +KV+    R Y ++      ++  L 
Sbjct: 11  IFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKL- 69

Query: 121 KNDKGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVD 169
                  SH         CV         +   +V E  K G SL  +LK+NK C   + 
Sbjct: 70  -------SHKHLVLNYGVCVC-------GDENILVQEFVKFG-SLDTYLKKNKNCINILW 114

Query: 170 LVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKS 229
            + E  +QL  ++ ++ +  LIH ++  +NI L+  E  +  G                 
Sbjct: 115 KL-EVAKQLAAAMHFLEENTLIHGNVCAKNI-LLIREEDRKTGNPP-------------- 158

Query: 230 SAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVIL-GLGWSYPCDMWSVGCILVE 282
             IKL D G +         ++     +       PE I      +   D WS G  L E
Sbjct: 159 -FIKLSDPGISIT-------VLPKDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWE 210

Query: 283 LCT-GEALFQTHENLEHLAMMER 304
           +C+ G+      ++   L   E 
Sbjct: 211 ICSGGDKPLSALDSQRKLQFYED 233

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 65.4 bits (160), Expect = 4e-12
 Identities = 60/239 (25%), Positives = 96/239 (40%), Gaps = 61/239 (25%)

Query: 69  KILSKMGEGTFGRVLEC-WDR---QTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C +D     T E VA+K ++ S  ++      EI++L+ L    
Sbjct: 13  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL---- 68

Query: 124 KGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVR 172
                H         C         R ++ ++ E    G SL D+L+++K     + L+ 
Sbjct: 69  ----QHDNIVKYKGVCYS-----AGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLL- 117

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
           ++  Q+ + + Y+   R IH DL   NI LV +E                         +
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNI-LVENENR-----------------------V 153

Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
           K+ DFG T    Q+                 APE +    +S   D+WS G +L EL T
Sbjct: 154 KIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 212

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 64.8 bits (158), Expect = 6e-12
 Identities = 37/277 (13%), Positives = 70/277 (25%), Gaps = 59/277 (21%)

Query: 37  AAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAI 96
           A  A            +   +         RY++L   G     +  +  D     +VA+
Sbjct: 2   AFDALREPDRESSAPPDDVQLVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVAL 61

Query: 97  KVVRSIRKYRDAAMIE--IDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPS 153
             V   +      +++  +     L++ D        ++ +    R    +V E + G S
Sbjct: 62  TFVDP-QGVLPDDVLQETLSRTLRLSRID---KPGVARVLDVVHTRAGGLVVAEWIRGGS 117

Query: 154 LFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY 213
           L +    +   P PV  +R   + L  +    H   +  +   P  + +           
Sbjct: 118 LQEVADTS---PSPVGAIR-AMQSLAAAADAAHRAGVALSIDHPSRVRV----------- 162

Query: 214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDM 273
             S  G            + L                                 +   D+
Sbjct: 163 --SIDG-----------DVVLAYPA-----------------TMPDA-------NPQDDI 185

Query: 274 WSVGCILVELCTGEALFQTHENLEHLAMMERALGPLP 310
             +G  L  L               LA  ER     P
Sbjct: 186 RGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQP 222

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 60/239 (25%), Positives = 96/239 (40%), Gaps = 61/239 (25%)

Query: 69  KILSKMGEGTFGRVLEC-WDR---QTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKND 123
           K L ++G+G FG V  C +D     T E VA+K ++ S  ++      EI++L+ L    
Sbjct: 44  KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSL---- 99

Query: 124 KGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVR 172
                H         C         R ++ ++ E    G SL D+L+++K     + L+ 
Sbjct: 100 ----QHDNIVKYKGVCYS-----AGRRNLKLIMEYLPYG-SLRDYLQKHKERIDHIKLL- 148

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
           ++  Q+ + + Y+   R IH DL   NI LV +E                         +
Sbjct: 149 QYTSQICKGMEYLGTKRYIHRDLATRNI-LVENENR-----------------------V 184

Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
           K+ DFG T    Q+                 APE +    +S   D+WS G +L EL T
Sbjct: 185 KIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFT 243

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 63.9 bits (156), Expect = 1e-11
 Identities = 57/240 (23%), Positives = 93/240 (38%), Gaps = 62/240 (25%)

Query: 69  KILSKMGEGTFGRVLEC-WD---RQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKN 122
           K +  +GEG FG+V  C +D     T E+VA+K ++  S   +      EI++L++L   
Sbjct: 24  KRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNL--- 80

Query: 123 DKGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLV 171
                 H         C +     D  N I ++ E    G SL ++L +NK        +
Sbjct: 81  -----YHENIVKYKGICTE-----DGGNGIKLIMEFLPSG-SLKEYLPKNKNKINLKQQL 129

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
            ++  Q+ + + Y+   + +H DL   N+ LV SE                         
Sbjct: 130 -KYAVQICKGMDYLGSRQYVHRDLAARNV-LVESEHQ----------------------- 164

Query: 232 IKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
           +K+ DFG T     +                 APE ++   +    D+WS G  L EL T
Sbjct: 165 VKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT 224

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 63.6 bits (155), Expect = 2e-11
 Identities = 57/315 (18%), Positives = 101/315 (32%), Gaps = 76/315 (24%)

Query: 65  TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLA-KN- 122
           +   ++L     G FG V +       E VA+K+     K       E+  L  +  +N 
Sbjct: 23  SMPLQLLEVKARGRFGCVWKAQLLN--EYVAVKIFPIQDKQSWQNEYEVYSLPGMKHENI 80

Query: 123 ------DKGGSSHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREF 174
                 +K G+S  V +           ++    + G SL DFLK N       + +   
Sbjct: 81  LQFIGAEKRGTSVDVDL----------WLITAFHEKG-SLSDFLKAN---VVSWNELCHI 126

Query: 175 GRQLLESVAYMHD----------LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR 224
              +   +AY+H+            + H D+K +N+LL                 +    
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL-----------------KNNLT 169

Query: 225 CLPKSSAIKLIDFGSTAFDNQNHSSIVS-----TRHYRAPEVI-----LGLGWSYPCDMW 274
                    + DFG         S+  +     TR Y APEV+              DM+
Sbjct: 170 A-------CIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMY 222

Query: 275 SVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWP 334
           ++G +L EL +           E++   E  +G  P     +     +K      R    
Sbjct: 223 AMGLVLWELASRCTAA-DGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKK-----RPVLR 276

Query: 335 EGAVSRESIKAVKKL 349
           +       +  + + 
Sbjct: 277 DYWQKHAGMAMLCET 291

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 43/252 (17%), Positives = 89/252 (35%), Gaps = 56/252 (22%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
            +  K+G G +G V E   ++    VA+K ++      +  + E  V++ +         
Sbjct: 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI--------K 274

Query: 129 H---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
           H         C +            I+ E    G +L D+L+          ++     Q
Sbjct: 275 HPNLVQLLGVCTR-------EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQ 326

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +  ++ Y+     IH +L   N  LV    +                       +K+ DF
Sbjct: 327 ISSAMEYLEKKNFIHRNLAARNC-LVGENHL-----------------------VKVADF 362

Query: 238 GSTAF--DNQNHSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT 292
           G +     +   +   +    +  APE +    +S   D+W+ G +L E+ T G + +  
Sbjct: 363 GLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 422

Query: 293 HENLEHLAMMER 304
            +  +   ++E+
Sbjct: 423 IDLSQVYELLEK 434

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 59/232 (25%), Positives = 92/232 (39%), Gaps = 47/232 (20%)

Query: 69  KILSKMGEGTFGRVLEC-WDR---QTQERVAIKVVRSIRKYRDAAMI-EIDVLQHLAKND 123
           K +S++G+G FG V  C +D     T   VA+K ++     +      EI +L+ L    
Sbjct: 26  KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKAL---- 81

Query: 124 KGGSSHCVQIRN--WFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
              S   V+ R   +   R  + +V E    G  L DFL+R++       L+  +  Q+ 
Sbjct: 82  --HSDFIVKYRGVSYGPGRQSLRLVMEYLPSG-CLRDFLQRHRARLDASRLL-LYSSQIC 137

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           + + Y+   R +H DL   NI LV SE                         +K+ DFG 
Sbjct: 138 KGMEYLGSRRCVHRDLAARNI-LVESEAH-----------------------VKIADFGL 173

Query: 240 TAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
                 +    V     +      APE +    +S   D+WS G +L EL T
Sbjct: 174 AKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFT 225

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 59.3 bits (144), Expect = 5e-10
 Identities = 66/292 (22%), Positives = 105/292 (35%), Gaps = 74/292 (25%)

Query: 69  KILSKMGEGTFGRVLEC-WDR---QTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKN 122
           K +  +GEG FG+V    +D     T E VA+K ++  +  ++R     EID+L+ L   
Sbjct: 34  KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTL--- 90

Query: 123 DKGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLV 171
                 H         C            + +V E   LG SL D+L R+        L+
Sbjct: 91  -----YHEHIIKYKGCCED-----AGAASLQLVMEYVPLG-SLRDYLPRHSIGL--AQLL 137

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
             F +Q+ E +AY+H    IH DL   N+ L+ ++ +                       
Sbjct: 138 -LFAQQICEGMAYLHAQHYIHRDLAARNV-LLDNDRL----------------------- 172

Query: 232 IKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
           +K+ DFG      + H                APE +    + Y  D+WS G  L EL T
Sbjct: 173 VKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT 232

Query: 286 -GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEG 336
             ++          L  + +        +         +   RG RL  P+ 
Sbjct: 233 HCDSSQSPPTKFLELIGIAQG-QMTVLRLT--------ELLERGERLPRPDK 275

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 58.6 bits (142), Expect = 1e-09
 Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 42/244 (17%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           K+  K+G G FG V    +++ T  +VA+K ++      +A + E +V++ L        
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGSMSVEAFLAEANVMKTLQ------H 242

Query: 128 SHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
              V++      +  I I+ E    G SL DFLK ++    P+  + +F  Q+ E +A++
Sbjct: 243 DKLVKLHAVV-TKEPIYIITEFMAKG-SLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFI 300

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STAFDN 244
                IH DL+  NI LVS+  +                        K+ DFG +   ++
Sbjct: 301 EQRNYIHRDLRAANI-LVSASLV-----------------------CKIADFGLARVIED 336

Query: 245 QNHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLA 300
             +++    +    + APE I    ++   D+WS G +L+E+ T G   +    N E + 
Sbjct: 337 NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIR 396

Query: 301 MMER 304
            +ER
Sbjct: 397 ALER 400

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 57.8 bits (140), Expect = 2e-09
 Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 44/245 (17%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++  K+G+G FG V    W+  T  RVAIK ++      +A + E  V++ L        
Sbjct: 187 RLEVKLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-------- 236

Query: 128 SHCVQIRNWFD--YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               ++   +       I IV E +   SL DFLK        +  + +   Q+   +AY
Sbjct: 237 -RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 295

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST--AF 242
           +  +  +H DL+  NIL V    +                        K+ DFG      
Sbjct: 296 VERMNYVHRDLRAANIL-VGENLV-----------------------CKVADFGLARLIE 331

Query: 243 DNQNHSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL 299
           DN+  +   +    +  APE  L   ++   D+WS G +L EL T G   +    N E L
Sbjct: 332 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 391

Query: 300 AMMER 304
             +ER
Sbjct: 392 DQVER 396

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 57.2 bits (138), Expect = 2e-09
 Identities = 51/273 (18%), Positives = 84/273 (30%), Gaps = 82/273 (30%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDV-----LQHLAKN 122
           K+L  +G G +G V +   D   +  VA+KV       R   + E ++     ++H    
Sbjct: 16  KLLELIGRGRYGAVYKGSLD---ERPVAVKVFSF--ANRQNFINEKNIYRVPLMEH---- 66

Query: 123 DKGGSSHCVQ-----IRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFG 175
                 +  +      R   D R    +V E    G SL  +L  +              
Sbjct: 67  -----DNIARFIVGDERVTADGRMEYLLVMEYYPNG-SLXKYLSLH---TSDWVSSCRLA 117

Query: 176 RQLLESVAYMHD---------LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL 226
             +   +AY+H            + H DL   N+L+ +                    C 
Sbjct: 118 HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKND-----------------GTC- 159

Query: 227 PKSSAIKLIDFG-----------STAFDNQNHSSIVSTRHYRAPEVILGL-------GWS 268
                  + DFG               ++    S V T  Y APEV+ G           
Sbjct: 160 ------VISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESAL 213

Query: 269 YPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
              DM+++G I  E+          E++    M
Sbjct: 214 KQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 56.4 bits (137), Expect = 3e-09
 Identities = 53/260 (20%), Positives = 93/260 (35%), Gaps = 74/260 (28%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
            +L ++G G FG V    W  Q    VA+K+++      D    E   +  L        
Sbjct: 11  TLLKELGSGQFGVVKLGKWKGQY--DVAVKMIKEGSMSEDEFFQEAQTMMKL-------- 60

Query: 128 SH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGR 176
           SH         C +          I IV E    G  L ++L+ +     P  L+ E   
Sbjct: 61  SHPKLVKFYGVCSK-------EYPIYIVTEYISNG-CLLNYLRSHGKGLEPSQLL-EMCY 111

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            + E +A++   + IH DL   N  LV  +                         +K+ D
Sbjct: 112 DVCEGMAFLESHQFIHRDLAARNC-LVDRDLC-----------------------VKVSD 147

Query: 237 FGSTAFDNQNHSSIVSTRHYR-----------APEVILGLGWSYPCDMWSVGCILVELCT 285
           FG T +       ++  ++             APEV     +S   D+W+ G ++ E+ +
Sbjct: 148 FGMTRY-------VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFS 200

Query: 286 -GEALFQTHENLEHLAMMER 304
            G+  +  + N E +  + +
Sbjct: 201 LGKMPYDLYTNSEVVLKVSQ 220

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 58/259 (22%), Positives = 102/259 (39%), Gaps = 63/259 (24%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQER--VAIKVVR----SIRKYRDAAMIEIDV---LQH 118
           ++L K+G+G+FG V    WD  + +   VA+K ++    S  +  D  + E++    L H
Sbjct: 21  RLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDH 80

Query: 119 LAKNDKGGSSHCVQIRNWFDY----RNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVR 172
                     + +++     Y       + +V E   LG SL D L++++       L  
Sbjct: 81  ---------RNLIRL-----YGVVLTPPMKMVTELAPLG-SLLDRLRKHQGHFLLGTLS- 124

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
            +  Q+ E + Y+   R IH DL   N+LL + + +K+                      
Sbjct: 125 RYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIG--------------------- 163

Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT- 285
              DFG      QN    V   H +      APE +    +S+  D W  G  L E+ T 
Sbjct: 164 ---DFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTY 220

Query: 286 GEALFQTHENLEHLAMMER 304
           G+  +      + L  +++
Sbjct: 221 GQEPWIGLNGSQILHKIDK 239

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 56.5 bits (137), Expect = 3e-09
 Identities = 62/251 (24%), Positives = 103/251 (41%), Gaps = 56/251 (22%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDV---LQHLAKNDK 124
           K++ ++G G FG V    ++  T  +VA+K ++      DA + E ++   LQH      
Sbjct: 16  KLVERLGAGQFGEVWMGYYNGHT--KVAVKSLKQGSMSPDAFLAEANLMKQLQH------ 67

Query: 125 GGSSHCVQIRNWFDY----RNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                 V++     Y    +  I I+ E  + G SL DFLK        ++ + +   Q+
Sbjct: 68  ---QRLVRL-----YAVVTQEPIYIITEYMENG-SLVDFLKTPSGIKLTINKLLDMAAQI 118

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
            E +A++ +   IH DL+  NI LVS                            K+ DFG
Sbjct: 119 AEGMAFIEERNYIHRDLRAANI-LVSDTLS-----------------------CKIADFG 154

Query: 239 ST--AFDNQNHSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTH 293
                 DN+  +   +    +  APE I    ++   D+WS G +L E+ T G   +   
Sbjct: 155 LARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGM 214

Query: 294 ENLEHLAMMER 304
            N E +  +ER
Sbjct: 215 TNPEVIQNLER 225

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 56.1 bits (136), Expect = 4e-09
 Identities = 58/253 (22%), Positives = 99/253 (39%), Gaps = 60/253 (23%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
             + ++G G FG V    W  +   +VAIK +R      +  + E +V+  L        
Sbjct: 11  TFVQEIGSGQFGLVHLGYWLNKD--KVAIKTIREGAMSEEDFIEEAEVMMKL-------- 60

Query: 128 SH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGR 176
           SH         C++       +  IC+V E  + G  L D+L+  +       L+     
Sbjct: 61  SHPKLVQLYGVCLE-------QAPICLVTEFMEHG-CLSDYLRTQRGLFAAETLL-GMCL 111

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            + E +AY+ +  +IH DL   N  LV    +                       IK+ D
Sbjct: 112 DVCEGMAYLEEACVIHRDLAARNC-LVGENQV-----------------------IKVSD 147

Query: 237 FGST--AFDNQNHSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ 291
           FG T    D+Q  SS  +    +  +PEV     +S   D+WS G ++ E+ + G+  ++
Sbjct: 148 FGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 207

Query: 292 THENLEHLAMMER 304
              N E +  +  
Sbjct: 208 NRSNSEVVEDIST 220

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 57.2 bits (138), Expect = 4e-09
 Identities = 61/245 (24%), Positives = 97/245 (39%), Gaps = 44/245 (17%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++  K+G+G FG V    W+  T  RVAIK ++      +A + E  V++ L        
Sbjct: 270 RLEVKLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTMSPEAFLQEAQVMKKL-------- 319

Query: 128 SHCVQIRNWFD--YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
               ++   +       I IV E +   SL DFLK        +  + +   Q+   +AY
Sbjct: 320 -RHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAY 378

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST--AF 242
           +  +  +H DL+  NI LV    +                        K+ DFG      
Sbjct: 379 VERMNYVHRDLRAANI-LVGENLV-----------------------CKVADFGLARLIE 414

Query: 243 DNQNHSSIVSTRHYR--APEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL 299
           DN+  +   +    +  APE  L   ++   D+WS G +L EL T G   +    N E L
Sbjct: 415 DNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL 474

Query: 300 AMMER 304
             +ER
Sbjct: 475 DQVER 479

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 56.1 bits (136), Expect = 5e-09
 Identities = 46/260 (17%), Positives = 89/260 (34%), Gaps = 72/260 (27%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
            +  K+G G +G V E   ++    VA+K ++      +  + E  V++ +         
Sbjct: 16  TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEI--------K 67

Query: 129 H---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
           H         C +            I+ E    G +L D+L+          ++     Q
Sbjct: 68  HPNLVQLLGVCTR-------EPPFYIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQ 119

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +  ++ Y+     IH DL   N  LV    +                       +K+ DF
Sbjct: 120 ISSAMEYLEKKNFIHRDLAARNC-LVGENHL-----------------------VKVADF 155

Query: 238 GSTAFDNQNHSSIVSTRHYR------------APEVILGLGWSYPCDMWSVGCILVELCT 285
           G         S +++   Y             APE +    +S   D+W+ G +L E+ T
Sbjct: 156 GL--------SRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 207

Query: 286 -GEALFQTHENLEHLAMMER 304
            G + +   +  +   ++E+
Sbjct: 208 YGMSPYPGIDLSQVYELLEK 227

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 55.8 bits (135), Expect = 6e-09
 Identities = 51/260 (19%), Positives = 91/260 (35%), Gaps = 65/260 (25%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQER---VAIKVVR--SIRKYRDAAMIEIDVLQHLAKN 122
                +G G FG V +      + ++   VAIK ++     K R   + E  ++      
Sbjct: 47  TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF--- 103

Query: 123 DKGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLV 171
                SH           +          + I+ E  + G +L  FL+        + LV
Sbjct: 104 -----SHHNIIRLEGVISK-------YKPMMIITEYMENG-ALDKFLREKDGEFSVLQLV 150

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA 231
               R +   + Y+ ++  +H DL   NI LV+S  +                       
Sbjct: 151 -GMLRGIAAGMKYLANMNYVHRDLAARNI-LVNSNLV----------------------- 185

Query: 232 IKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
            K+ DFG +     +  +  +T   +      APE I    ++   D+WS G ++ E+ T
Sbjct: 186 CKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMT 245

Query: 286 -GEALFQTHENLEHLAMMER 304
            GE  +    N E +  +  
Sbjct: 246 YGERPYWELSNHEVMKAIND 265

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 55.8 bits (135), Expect = 7e-09
 Identities = 53/259 (20%), Positives = 87/259 (33%), Gaps = 64/259 (24%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQE--RVAIKVVR--SIRKYRDAAMIEIDVLQHLAKND 123
            I   +G G  G V         Q    VAIK ++     + R   + E  ++       
Sbjct: 52  HIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQF---- 107

Query: 124 KGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVR 172
                H           +            IV E  + G SL  FL+ +      + LV 
Sbjct: 108 ----DHPNIIRLEGVVTR-------GRLAMIVTEYMENG-SLDTFLRTHDGQFTIMQLV- 154

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
              R +   + Y+ DL  +H DL   N+ LV S  +                        
Sbjct: 155 GMLRGVGAGMRYLSDLGYVHRDLAARNV-LVDSNLV-----------------------C 190

Query: 233 KLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT- 285
           K+ DFG +     +  +  +T   +      APE I    +S   D+WS G ++ E+   
Sbjct: 191 KVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAY 250

Query: 286 GEALFQTHENLEHLAMMER 304
           GE  +    N + ++ +E 
Sbjct: 251 GERPYWNMTNRDVISSVEE 269

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 55.3 bits (134), Expect = 8e-09
 Identities = 54/264 (20%), Positives = 105/264 (39%), Gaps = 65/264 (24%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLE-CWDRQTQE-RVAIKVVR---SIRKYRDAAMIEIDV- 115
           + LT   K L   G G FG V +  +  +     VA+K+++   +    +D  + E +V 
Sbjct: 16  KLLTLEDKEL---GSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVM 72

Query: 116 --LQHLAKNDKGGSSHCVQIRNWFDY----RNHICIVFE--KLGPSLFDFLKRNKYCPFP 167
             L +          + V++               +V E  +LG  L  +L++N++    
Sbjct: 73  QQLDN---------PYIVRM-----IGICEAESWMLVMEMAELG-PLNKYLQQNRHVKDK 117

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
            +++ E   Q+   + Y+ +   +H DL   N+LLV+  + K+                 
Sbjct: 118 -NII-ELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS---------------- 159

Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILV 281
                   DFG +     + +   +  H +      APE I    +S   D+WS G ++ 
Sbjct: 160 --------DFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMW 211

Query: 282 ELCT-GEALFQTHENLEHLAMMER 304
           E  + G+  ++  +  E  AM+E+
Sbjct: 212 EAFSYGQKPYRGMKGSEVTAMLEK 235

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 54.6 bits (132), Expect = 1e-08
 Identities = 49/252 (19%), Positives = 95/252 (37%), Gaps = 60/252 (23%)

Query: 73  KMGEGTFGRVLE-CWDRQTQE-RVAIKVVR--SIRKYRDAAMIEIDV---LQHLAKNDKG 125
           ++G G FG V +  +  + ++  VAIKV++  + +   +  M E  +   L +       
Sbjct: 17  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN------- 69

Query: 126 GSSHCVQIRNWFDY----RNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
              + V++             + +V E    G  L  FL   +      ++  E   Q+ 
Sbjct: 70  --PYIVRL-----IGVCQAEALMLVMEMAGGG-PLHKFLVGKREEIPVSNVA-ELLHQVS 120

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
             + Y+ +   +H DL   N+LLV+  + K+                         DFG 
Sbjct: 121 MGMKYLEEKNFVHRDLAARNVLLVNRHYAKIS------------------------DFGL 156

Query: 240 TAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT 292
           +     + S   +    +      APE I    +S   D+WS G  + E  + G+  ++ 
Sbjct: 157 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216

Query: 293 HENLEHLAMMER 304
            +  E +A +E+
Sbjct: 217 MKGPEVMAFIEQ 228

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 54.5 bits (132), Expect = 1e-08
 Identities = 50/260 (19%), Positives = 98/260 (37%), Gaps = 74/260 (28%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
             L ++G G FG V    W  Q    VAIK+++      D  + E  V+ +L        
Sbjct: 27  TFLKELGTGQFGVVKYGKWRGQY--DVAIKMIKEGSMSEDEFIEEAKVMMNL-------- 76

Query: 128 SH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGR 176
           SH         C +       +  I I+ E    G  L ++L+  ++      L+ E  +
Sbjct: 77  SHEKLVQLYGVCTK-------QRPIFIITEYMANG-CLLNYLREMRHRFQTQQLL-EMCK 127

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            + E++ Y+   + +H DL   N  LV+ + +                       +K+ D
Sbjct: 128 DVCEAMEYLESKQFLHRDLAARNC-LVNDQGV-----------------------VKVSD 163

Query: 237 FGSTAFDNQNHSSIVSTRHYR-----------APEVILGLGWSYPCDMWSVGCILVELCT 285
           FG + +       ++   +              PEV++   +S   D+W+ G ++ E+ +
Sbjct: 164 FGLSRY-------VLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216

Query: 286 -GEALFQTHENLEHLAMMER 304
            G+  ++   N E    + +
Sbjct: 217 LGKMPYERFTNSETAEHIAQ 236

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 55.1 bits (133), Expect = 2e-08
 Identities = 52/253 (20%), Positives = 95/253 (37%), Gaps = 52/253 (20%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQE--RVAIKVVR--SIRKYRDAAMIEIDV---LQHLA 120
            I   +G G FG V        +++   VAIK ++     K R   + E  +     H  
Sbjct: 48  SIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH-- 105

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQL 178
                   + +++         + IV E  + G SL  FL+++      + LV    R +
Sbjct: 106 -------PNIIRLEGVVTKSKPVMIVTEYMENG-SLDSFLRKHDAQFTVIQLV-GMLRGI 156

Query: 179 LESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG 238
              + Y+ D+  +H DL   NI L++S  +                        K+ DFG
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNI-LINSNLV-----------------------CKVSDFG 192

Query: 239 STAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ 291
                  +  +  +TR  +      +PE I    ++   D+WS G +L E+ + GE  + 
Sbjct: 193 LGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW 252

Query: 292 THENLEHLAMMER 304
              N + +  ++ 
Sbjct: 253 EMSNQDVIKAVDE 265

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 53.8 bits (130), Expect = 3e-08
 Identities = 49/255 (19%), Positives = 83/255 (32%), Gaps = 60/255 (23%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDKGG 126
            +  ++G G FG V     R     VA+K  R       +   + E  +L+         
Sbjct: 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQY------- 169

Query: 127 SSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFG 175
            SH         C Q       +  I IV E  + G     FL+          L+ +  
Sbjct: 170 -SHPNIVRLIGVCTQ-------KQPIYIVMELVQGG-DFLTFLRTEGARLRVKTLL-QMV 219

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
                 + Y+     IH DL   N  LV+ + +                       +K+ 
Sbjct: 220 GDAAAGMEYLESKCCIHRDLAARNC-LVTEKNV-----------------------LKIS 255

Query: 236 DFGSTAFDNQNHSSIVSTRH---YR--APEVILGLGWSYPCDMWSVGCILVELCT-GEAL 289
           DFG +  +     +          +  APE +    +S   D+WS G +L E  + G + 
Sbjct: 256 DFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASP 315

Query: 290 FQTHENLEHLAMMER 304
           +    N +    +E+
Sbjct: 316 YPNLSNQQTREFVEK 330

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 53.8 bits (130), Expect = 4e-08
 Identities = 48/266 (18%), Positives = 98/266 (36%), Gaps = 79/266 (29%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQE---RVAIKVVR--SIRKYRDAAMIEIDVLQHLAKN 122
           K +  +G G FG V +  W  + ++    VAIK +R  +  K     + E  V+  +   
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV--- 74

Query: 123 DKGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLV 171
                 +         C+         + + ++ +    G  L D+++ +K       L+
Sbjct: 75  -----DNPHVCRLLGICLT--------STVQLITQLMPFG-CLLDYVREHKDNIGSQYLL 120

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL------------PGYKRSSSG 219
             +  Q+ + + Y+ D RL+H DL   N+L+ + + +K+                 +  G
Sbjct: 121 -NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179

Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 279
           ++P +                               + A E IL   +++  D+WS G  
Sbjct: 180 KVPIK-------------------------------WMALESILHRIYTHQSDVWSYGVT 208

Query: 280 LVELCT-GEALFQTHENLEHLAMMER 304
           + EL T G   +      E  +++E+
Sbjct: 209 VWELMTFGSKPYDGIPASEISSILEK 234

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 51.8 bits (125), Expect = 1e-07
 Identities = 55/258 (21%), Positives = 95/258 (36%), Gaps = 65/258 (25%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQE--RVAIKVVR--SIRKYRDAAMIEIDV---LQHLA 120
            +   +GEG FG V E  +     E   VA+K  +       ++  M E  +   L H  
Sbjct: 15  VLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDH-- 72

Query: 121 KNDKGGSSHCVQIRNWFDY----RNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREF 174
                   H V++               I+ E    G  L  +L+RNK     + LV  +
Sbjct: 73  -------PHIVKL-----IGIIEEEPTWIIMELYPYG-ELGHYLERNKNSLKVLTLV-LY 118

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             Q+ +++AY+  +  +H D+   NI LV+S                          +KL
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNI-LVASPEC-----------------------VKL 154

Query: 235 IDFG-STAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT-G 286
            DFG S   ++            R      +PE I    ++   D+W     + E+ + G
Sbjct: 155 GDFGLSRYIED---EDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFG 211

Query: 287 EALFQTHENLEHLAMMER 304
           +  F   EN + + ++E+
Sbjct: 212 KQPFFWLENKDVIGVLEK 229

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 54/257 (21%), Positives = 93/257 (36%), Gaps = 63/257 (24%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQE--RVAIKVVR--SIRKYRDAAMIEIDVLQHLAKND 123
           ++   +GEG FG V +  +         VAIK  +  +    R+  + E   ++      
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQF---- 448

Query: 124 KGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVR 172
                H           +        N + I+ E   LG  L  FL+  K+      L+ 
Sbjct: 449 ----DHPHIVKLIGVITE--------NPVWIIMELCTLG-ELRSFLQVRKFSLDLASLI- 494

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
            +  QL  ++AY+   R +H D+   N+ LVSS                          +
Sbjct: 495 LYAYQLSTALAYLESKRFVHRDIAARNV-LVSSNDC-----------------------V 530

Query: 233 KLIDFG-STAFDNQNHSSIVSTR---HYRAPEVILGLGWSYPCDMWSVGCILVELCT-GE 287
           KL DFG S   ++  +      +    + APE I    ++   D+W  G  + E+   G 
Sbjct: 531 KLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGV 590

Query: 288 ALFQTHENLEHLAMMER 304
             FQ  +N + +  +E 
Sbjct: 591 KPFQGVKNNDVIGRIEN 607

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 51.9 bits (124), Expect = 2e-07
 Identities = 48/252 (19%), Positives = 95/252 (37%), Gaps = 60/252 (23%)

Query: 73  KMGEGTFGRVLE-CWDRQTQE-RVAIKVVR--SIRKYRDAAMIEIDV---LQHLAKNDKG 125
           ++G G FG V +  +  + ++  VAIKV++  + +   +  M E  +   L +       
Sbjct: 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN------- 395

Query: 126 GSSHCVQIRNWFDY----RNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
              + V++             + +V E    G  L  FL   +      ++  E   Q+ 
Sbjct: 396 --PYIVRL-----IGVCQAEALMLVMEMAGGG-PLHKFLVGKREEIPVSNVA-ELLHQVS 446

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
             + Y+ +   +H +L   N+LLV+  + K+                         DFG 
Sbjct: 447 MGMKYLEEKNFVHRNLAARNVLLVNRHYAKIS------------------------DFGL 482

Query: 240 TAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT 292
           +     + S   +    +      APE I    +S   D+WS G  + E  + G+  ++ 
Sbjct: 483 SKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 542

Query: 293 HENLEHLAMMER 304
            +  E +A +E+
Sbjct: 543 MKGPEVMAFIEQ 554

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 57/262 (21%), Positives = 95/262 (36%), Gaps = 73/262 (27%)

Query: 69  KILSKMGEGTFGRVLE-CWDRQTQE--RVAIKVVR--SIRKYRDAAMIEIDV---LQHLA 120
           ++   +GEG FG V +  +         VAIK  +  +    R+  + E        H  
Sbjct: 18  ELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDH-- 75

Query: 121 KNDKGGSSHCVQIRNWFDY----RNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREF 174
                   H V++           N + I+ E   LG  L  FL+  KY      L+  +
Sbjct: 76  -------PHIVKL-----IGVITENPVWIIMELCTLG-ELRSFLQVRKYSLDLASLI-LY 121

Query: 175 GRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
             QL  ++AY+   R +H D+   N+ LVSS                          +KL
Sbjct: 122 AYQLSTALAYLESKRFVHRDIAARNV-LVSSNDC-----------------------VKL 157

Query: 235 IDFGSTAFDNQNHSSIVSTRHYR-----------APEVILGLGWSYPCDMWSVGCILVEL 283
            DFG + +       +  + +Y+           APE I    ++   D+W  G  + E+
Sbjct: 158 GDFGLSRY-------MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEI 210

Query: 284 CT-GEALFQTHENLEHLAMMER 304
              G   FQ  +N + +  +E 
Sbjct: 211 LMHGVKPFQGVKNNDVIGRIEN 232

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 50.4 bits (121), Expect = 4e-07
 Identities = 37/183 (20%), Positives = 73/183 (39%), Gaps = 43/183 (23%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQER---VAIKVVR--SIRKYRDAAMIEIDV---LQHL 119
           + L  +G G FG V +  W  + +     V IKV+   S R+   A    +     L H 
Sbjct: 16  RKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH- 74

Query: 120 AKNDKGGSSHCVQIRNWFDY----RNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVRE 173
                   +H V++           + + +V +   LG SL D +++++    P  L+  
Sbjct: 75  --------AHIVRL-----LGLCPGSSLQLVTQYLPLG-SLLDHVRQHRGALGPQLLL-N 119

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL------------PGYKRSSSGEM 221
           +G Q+ + + Y+ +  ++H +L   N+LL S   +++                  S  + 
Sbjct: 120 WGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 179

Query: 222 PFR 224
           P +
Sbjct: 180 PIK 182

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 48/266 (18%), Positives = 98/266 (36%), Gaps = 79/266 (29%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQE---RVAIKVVR--SIRKYRDAAMIEIDVLQHLAKN 122
           K +  +G G FG V +  W  + ++    VAIK +R  +  K     + E  V+  +   
Sbjct: 18  KKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV--- 74

Query: 123 DKGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLV 171
                 +         C+         + + ++ +    G  L D+++ +K       L+
Sbjct: 75  -----DNPHVCRLLGICLT--------STVQLITQLMPFG-CLLDYVREHKDNIGSQYLL 120

Query: 172 REFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP------------GYKRSSSG 219
             +  Q+ + + Y+ D RL+H DL   N+L+ + + +K+                 +  G
Sbjct: 121 -NWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGG 179

Query: 220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI 279
           ++P +                               + A E IL   +++  D+WS G  
Sbjct: 180 KVPIK-------------------------------WMALESILHRIYTHQSDVWSYGVT 208

Query: 280 LVELCT-GEALFQTHENLEHLAMMER 304
           + EL T G   +      E  +++E+
Sbjct: 209 VWELMTFGSKPYDGIPASEISSILEK 234

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 46.4 bits (111), Expect = 7e-06
 Identities = 48/255 (18%), Positives = 91/255 (35%), Gaps = 68/255 (26%)

Query: 69  KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           K+L  +G+G FG V+    R    +VA+K +++    +   + E  V+  L         
Sbjct: 24  KLLQTIGKGEFGDVMLGDYRGN--KVAVKCIKNDATAQAF-LAEASVMTQL--------R 72

Query: 129 H---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
           H          V+       +  + IV E    G SL D+L+         D + +F   
Sbjct: 73  HSNLVQLLGVIVE------EKGGLYIVTEYMAKG-SLVDYLRSRGRSVLGGDCLLKFSLD 125

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKL-------PGYKRSSSGEMPFRCLPKSS 230
           + E++ Y+     +H DL   N+L+      K+              +G++P +      
Sbjct: 126 VCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------ 179

Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEAL 289
                                    + APE +    +S   D+WS G +L E+ + G   
Sbjct: 180 -------------------------WTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214

Query: 290 FQTHENLEHLAMMER 304
           +      + +  +E+
Sbjct: 215 YPRIPLKDVVPRVEK 229

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 45.9 bits (109), Expect = 1e-05
 Identities = 44/253 (17%), Positives = 86/253 (33%), Gaps = 64/253 (25%)

Query: 69  KILSKMGEGTFGRVLEC---WDRQTQERVAIKVVRSIRKYRDAA--MIEIDVLQHLAKND 123
                +G G FG V       +   +   A+K +  I    + +  + E  +++      
Sbjct: 92  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF---- 147

Query: 124 KGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVR 172
               SH         C              +V    K G  L +F++   + P   DL+ 
Sbjct: 148 ----SHPNVLSLLGIC------LRSEGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLIG 196

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
            FG Q+ + + ++   + +H DL   N  ++  +F                        +
Sbjct: 197 -FGLQVAKGMKFLASKKFVHRDLAARNC-MLDEKFT-----------------------V 231

Query: 233 KLIDFG-STAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
           K+ DFG +    ++   S+ +    +      A E +    ++   D+WS G +L EL T
Sbjct: 232 KVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291

Query: 286 -GEALFQTHENLE 297
            G   +      +
Sbjct: 292 RGAPPYPDVNTFD 304

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 44.9 bits (107), Expect = 2e-05
 Identities = 30/157 (19%), Positives = 55/157 (35%), Gaps = 32/157 (20%)

Query: 69  KILSKMGEGTFGRVLEC---WDRQTQERVAIKVVRSIRKYRDAA--MIEIDVLQHLAKND 123
                +G G FG V       +   +   A+K +  I    + +  + E  +++      
Sbjct: 28  HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF---- 83

Query: 124 KGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVR 172
               SH         C              +V    K G  L +F++   + P   DL+ 
Sbjct: 84  ----SHPNVLSLLGIC------LRSEGSPLVVLPYMKHG-DLRNFIRNETHNPTVKDLIG 132

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK 209
            FG Q+ + + Y+   + +H DL   N +L     +K
Sbjct: 133 -FGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVK 168

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 44.3 bits (105), Expect = 5e-05
 Identities = 51/236 (21%), Positives = 86/236 (36%), Gaps = 69/236 (29%)

Query: 69  KILSKMGEGTFGRVLEC-WDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           K+L  +G+G FG V+   +       VA+K +++    +   + E  V+  L        
Sbjct: 196 KLLQTIGKGEFGDVMLGDYRGNK---VAVKCIKNDATAQAF-LAEASVMTQL-------- 243

Query: 128 SH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVREFGR 176
            H          V+       +  + IV E    G SL D+L+         D + +F  
Sbjct: 244 RHSNLVQLLGVIVE------EKGGLYIVTEYMAKG-SLVDYLRSRGRSVLGGDCLLKFSL 296

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            + E++ Y+     +H DL   N+ LVS + +                        K+ D
Sbjct: 297 DVCEAMEYLEGNNFVHRDLAARNV-LVSEDNV-----------------------AKVSD 332

Query: 237 FGSTAFDNQNHSSIVSTRHYR-------APEVILGLGWSYPCDMWSVGCILVELCT 285
           FG T           ST+          APE +    +S   D+WS G +L E+ +
Sbjct: 333 FGLT-------KEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 44.1 bits (103), Expect = 7e-05
 Identities = 71/513 (13%), Positives = 132/513 (25%), Gaps = 188/513 (36%)

Query: 48  RDDDREGHYVFNLGENLTPRYK-ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY- 105
                E    F + E L   YK ++S +        +       Q        +   KY 
Sbjct: 72  LSKQEEMVQKF-VEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN 130

Query: 106 --RDAAMIEI-DVLQHLAKNDK------GGS-----------SHCVQIRN-----WFDYR 140
             R    +++   L  L            GS           S+ VQ +      W + +
Sbjct: 131 VSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLK 190

Query: 141 N------------HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL 188
           N             +    +    S  D           +  ++   R+LL+S  Y + L
Sbjct: 191 NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI---KLRIHSIQAELRRLLKSKPYENCL 247

Query: 189 RLIHTDLKPENIL---------LVSS------EFIKLPGYKRSSSGE------------- 220
            L+  +++              L+++      +F+        S                
Sbjct: 248 -LVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSL 306

Query: 221 ------MPFRCLPKSS------AIKLI-----DFGSTAFDNQNH------SSIVST---- 253
                    + LP+         + +I     D  +T +DN  H      ++I+ +    
Sbjct: 307 LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLAT-WDNWKHVNCDKLTTIIESSLNV 365

Query: 254 -------RHYRA----------PEVILGLGW---SYPCDMWSV----------------- 276
                  + +            P ++L L W        M  V                 
Sbjct: 366 LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKEST 425

Query: 277 ----GCILVELCTGEALFQTHENL-EHLAMMER----ALGPLPE----------HMIRRA 317
                  L      E  +  H ++ +H  + +      L P             H+  + 
Sbjct: 426 ISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHL--KN 483

Query: 318 SRGTEKY--FRRG-SRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL 374
               E+   FR       + E  +  +S                    A  ++ + L  L
Sbjct: 484 IEHPERMTLFRMVFLDFRFLEQKIRHDSTAW----------------NASGSILNTLQQL 527

Query: 375 LRY-------DPS-ERLTARQALNHPFFRNLNE 399
             Y       DP  ERL    A+   F   + E
Sbjct: 528 KFYKPYICDNDPKYERLV--NAILD-FLPKIEE 557

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 47/260 (18%), Positives = 91/260 (35%), Gaps = 64/260 (24%)

Query: 69  KILSKMGEGTFGRVLEC---WDRQTQERVAIKVVRSIRKYRDAA--MIEIDVLQHLAKND 123
                +G+G FG V         Q + + AIK +  I + +     + E  +++ L    
Sbjct: 24  HSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGL---- 79

Query: 124 KGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNKYCPFPVDLVR 172
               +H                        ++      G  L  F++  +  P   DL+ 
Sbjct: 80  ----NHPNVLALIGIM------LPPEGLPHVLLPYMCHG-DLLQFIRSPQRNPTVKDLI- 127

Query: 173 EFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAI 232
            FG Q+   + Y+ + + +H DL   N  ++   F                        +
Sbjct: 128 SFGLQVARGMEYLAEQKFVHRDLAARNC-MLDESFT-----------------------V 163

Query: 233 KLIDFG-STAFDNQNHSSIVSTRHYR------APEVILGLGWSYPCDMWSVGCILVELCT 285
           K+ DFG +    ++ + S+   RH R      A E +    ++   D+WS G +L EL T
Sbjct: 164 KVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLT 223

Query: 286 -GEALFQTHENLEHLAMMER 304
            G   ++  +  +    + +
Sbjct: 224 RGAPPYRHIDPFDLTHFLAQ 243

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 42.3 bits (100), Expect = 2e-04
 Identities = 39/200 (19%), Positives = 75/200 (37%), Gaps = 53/200 (26%)

Query: 66  PRYKI--LSKMGEGTFGRVLEC-----WDRQTQERVAIKVVR--SIRKYRDAAMIEIDVL 116
           PR  +     +G G FG+V+E             +VA+K+++  +    ++A M E+ ++
Sbjct: 44  PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIM 103

Query: 117 QHLAKNDK-----GGSSHCVQIRNWFDYRNHICIVFE--KLGPSLFDFL--KRNKYCPFP 167
            HL +++      G  +H             + ++ E    G  L +FL  K       P
Sbjct: 104 SHLGQHENIVNLLGACTH----------GGPVLVITEYCCYG-DLLNFLRRKSRVLETDP 152

Query: 168 V-----------DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL------ 210
                       DL+  F  Q+ + +A++     IH D+   N+LL +    K+      
Sbjct: 153 AFAIANSTASTRDLLH-FSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 211

Query: 211 ------PGYKRSSSGEMPFR 224
                   Y    +  +P +
Sbjct: 212 RDIMNDSNYIVKGNARLPVK 231

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 39/174 (22%), Positives = 63/174 (36%), Gaps = 53/174 (30%)

Query: 66  PRYKI--LSKMGEGTFGRVLEC-----WDRQTQERVAIKVVR--SIRKYRDAAMIEIDVL 116
           PR ++     +G G FG+V+E              VA+K+++  +    R+A M E+ VL
Sbjct: 21  PRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVL 80

Query: 117 QHLAKNDKGGSSH---------CVQIRNWFDYRNHICIVFE--KLGPSLFDFLKRNK--- 162
            +L         H         C              ++ E    G  L +FL+R +   
Sbjct: 81  SYLGN-------HMNIVNLLGACTI-------GGPTLVITEYCCYG-DLLNFLRRKRDSF 125

Query: 163 --------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL 202
                               DL+  F  Q+ + +A++     IH DL   NILL
Sbjct: 126 ICSKTSPAIMEDDELALDLEDLLS-FSYQVAKGMAFLASKNCIHRDLAARNILL 178

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	399
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3q4u_A	301	Activin receptor type-1; structural genomics conso	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	100.0
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	100.0
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	100.0
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	100.0
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	100.0
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	100.0
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3pls_A	298	Macrophage-stimulating protein receptor; protein k	100.0
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	100.0
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	100.0
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	100.0
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	100.0
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	100.0
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	100.0
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	100.0
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	100.0
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	100.0
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	100.0
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	100.0
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	100.0
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	100.0
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	100.0
3uqc_A	286	Probable conserved transmembrane protein; structur	100.0
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	100.0
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	100.0
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.95
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.92
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.86
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.76
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	99.39
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	99.23
3sg8_A	304	APH(2'')-ID; antibiotic resistance enzyme, transfe	99.16
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	99.13
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	98.74
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	98.71
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	98.6
3ovc_A	362	Hygromycin-B 4-O-kinase; aminoglycoside phosphotra	98.4
2olc_A	397	MTR kinase, methylthioribose kinase; kinase ADP-2H	98.35
2q83_A	346	YTAA protein; 2635576, structural genomics, joint	98.19
3ats_A	357	Putative uncharacterized protein; hypothetical pro	98.14
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	98.12
3jr1_A	312	Putative fructosamine-3-kinase; YP_719053.1, struc	97.82
3dxq_A	301	Choline/ethanolamine kinase family protein; NP_106	97.77
2pyw_A	420	Uncharacterized protein; 5-methylthioribose kinase	97.64
3f7w_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	97.52
3csv_A	333	Aminoglycoside phosphotransferase; YP_614837.1, ph	97.5
3feg_A	379	Choline/ethanolamine kinase; non-protein kinase, c	97.4
2ppq_A	322	HSK, HK, homoserine kinase; structural genomics, M	97.36
1zyl_A	328	Hypothetical protein YIHE; putative protein kinase	97.35
2yle_A	229	Protein spire homolog 1; actin-binding protein, ac	97.28
3c5i_A	369	Choline kinase; choline, kinase, malaria, transfer	97.14
1nw1_A	429	Choline kinase (49.2 KD); phospholipid synthesis,	97.07
2qg7_A	458	Ethanolamine kinase PV091845; malaria, SGC, struct	96.89
3i1a_A	339	Spectinomycin phosphotransferase; protein kinase,	96.86
3f2s_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	96.14
3mes_A	424	Choline kinase; malaria, structural genomics, stru	95.79
3g15_A	401	CK, chetk-alpha, choline kinase alpha; non-protein	93.78

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=6.6e-65  Score=468.64  Aligned_cols=251  Identities=25%  Similarity=0.435  Sum_probs=221.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++++.||+|+||+||+|++..+|+.||||++.+..    .....+..|+++++.+.      |||||+++++|++++
T Consensus        32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~------HpnIv~l~~~~~~~~  105 (311)
T 4aw0_A           32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD------HPFFVKLYFTFQDDE  105 (311)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCC------CTTBCCEEEEEECSS
T ss_pred             cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEEeCC
Confidence            46999999999999999999999999999999997532    23355777888887774      699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+||||||| ||+|.+++.+.+  .+++..++.|+.||+.||+|||++|||||||||+||||                  
T Consensus       106 ~~yivmEy~~gG~L~~~i~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl------------------  165 (311)
T 4aw0_A          106 KLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL------------------  165 (311)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE------------------
T ss_pred             EEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEE------------------
Confidence            999999999 999999998876  59999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                            +.++.+||+|||+|.....     ...+.+||+.|||||++.+..|+.++|||||||++|+|++|++||.+.+.
T Consensus       166 ------~~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~  239 (311)
T 4aw0_A          166 ------NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE  239 (311)
T ss_dssp             ------CTTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ------cCCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence                  4567899999999976422     23567999999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+...+|......+|                                                  ..+|+++++||.+||
T Consensus       240 ~~~~~~i~~~~~~~p--------------------------------------------------~~~s~~~~dli~~lL  269 (311)
T 4aw0_A          240 GLIFAKIIKLEYDFP--------------------------------------------------EKFFPKARDLVEKLL  269 (311)
T ss_dssp             HHHHHHHHHTCCCCC--------------------------------------------------TTCCHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCCCC--------------------------------------------------cccCHHHHHHHHHHc
Confidence            888887766433222                                                  245778899999999


Q ss_pred             ccCCCCCCCHHH------HhCCccccCCC
Q 015867          376 RYDPSERLTARQ------ALNHPFFRNLN  398 (399)
Q Consensus       376 ~~dP~~R~t~~e------ll~hp~f~~~~  398 (399)
                      +.||.+|||++|      |++||||++++
T Consensus       270 ~~dp~~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          270 VLDATKRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             CSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             cCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence            999999999987      58999999985

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.7e-63  Score=465.95  Aligned_cols=252  Identities=27%  Similarity=0.444  Sum_probs=221.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ++|+++++||+|+||+||+|++..+|+.||||++.... .....+.+|+++++.+.      |||||+++++|.+++.+|
T Consensus        74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~------HpnIV~l~~~~~~~~~~~  147 (346)
T 4fih_A           74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HENVVEMYNSYLVGDELW  147 (346)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCC------CTTBCCEEEEEEETTEEE
T ss_pred             HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCC------CCCCCcEEEEEEECCEEE
Confidence            56999999999999999999999999999999997533 23455778999999885      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      |||||| ||+|.+++.+.   .+++..++.|+.||+.||+|||++|||||||||+||||                     
T Consensus       148 ivmEy~~gg~L~~~l~~~---~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl---------------------  203 (346)
T 4fih_A          148 VVMEFLEGGALTDIVTHT---RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---------------------  203 (346)
T ss_dssp             EEECCCTTEEHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------------
T ss_pred             EEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEE---------------------
Confidence            999999 99999999875   49999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                         +.++.+||+|||+|.....   ...+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.+.
T Consensus       204 ---~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~  280 (346)
T 4fih_A          204 ---THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK  280 (346)
T ss_dssp             ---CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred             ---CCCCCEEEecCcCceecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence               4567899999999876432   3467899999999999999999999999999999999999999999988888777


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .|.....+.                                               ...+..+|+++.+||.+||+.||.
T Consensus       281 ~i~~~~~~~-----------------------------------------------~~~~~~~s~~~~dli~~~L~~dP~  313 (346)
T 4fih_A          281 MIRDNLPPR-----------------------------------------------LKNLHKVSPSLKGFLDRLLVRDPA  313 (346)
T ss_dssp             HHHHSSCCC-----------------------------------------------CSCGGGSCHHHHHHHHHHSCSSTT
T ss_pred             HHHcCCCCC-----------------------------------------------CCccccCCHHHHHHHHHHcCCChh
Confidence            765432110                                               012246788999999999999999


Q ss_pred             CCCCHHHHhCCccccCC
Q 015867          381 ERLTARQALNHPFFRNL  397 (399)
Q Consensus       381 ~R~t~~ell~hp~f~~~  397 (399)
                      +|||++|+|+||||++.
T Consensus       314 ~R~ta~e~l~Hp~~~~~  330 (346)
T 4fih_A          314 QRATAAELLKHPFLAKA  330 (346)
T ss_dssp             TSCCHHHHTTCGGGGGC
T ss_pred             HCcCHHHHhcCHhhcCC
Confidence            99999999999999864

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=1.8e-63  Score=452.96  Aligned_cols=249  Identities=26%  Similarity=0.469  Sum_probs=206.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||+||+|++..+|+.||||++++..    .....+.+|+++++.++      ||||+++++++.+++
T Consensus        13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~~~~~~~~~~   86 (275)
T 3hyh_A           13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR------HPHIIKLYDVIKSKD   86 (275)
T ss_dssp             -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCC------CTTBCCEEEEEECSS
T ss_pred             eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCC------CCCCCeEEEEEEECC
Confidence            57999999999999999999999999999999996532    23456778999999885      599999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          142 HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       142 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .+|+|||||+|+|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+                   
T Consensus        87 ~~~ivmEy~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl-------------------  145 (275)
T 3hyh_A           87 EIIMVIEYAGNELFDYIVQRD--KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL-------------------  145 (275)
T ss_dssp             EEEEEEECCCEEHHHHHHHSC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE-------------------
T ss_pred             EEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEE-------------------
Confidence            999999999999999998876  69999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           +.++.+||+|||+|.....  ...+.+||+.|||||++.+..| +.++|||||||++|+|++|++||.+.+..+.
T Consensus       146 -----~~~~~vkl~DFGla~~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~  220 (275)
T 3hyh_A          146 -----DEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVL  220 (275)
T ss_dssp             -----CTTCCEEECCSSCC---------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             -----CCCCCEEEeecCCCeecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence                 4567899999999976433  3356789999999999999876 5899999999999999999999998887777


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...|......+|                                                  ..+|+++++||.+||+.|
T Consensus       221 ~~~i~~~~~~~p--------------------------------------------------~~~s~~~~~li~~~L~~d  250 (275)
T 3hyh_A          221 FKNISNGVYTLP--------------------------------------------------KFLSPGAAGLIKRMLIVN  250 (275)
T ss_dssp             HHHHHHTCCCCC--------------------------------------------------TTSCHHHHHHHHHHSCSS
T ss_pred             HHHHHcCCCCCC--------------------------------------------------CCCCHHHHHHHHHHccCC
Confidence            766655332222                                                  346788999999999999


Q ss_pred             CCCCCCHHHHhCCccccC
Q 015867          379 PSERLTARQALNHPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~  396 (399)
                      |.+|||++|+++||||+.
T Consensus       251 P~~R~s~~eil~hpw~k~  268 (275)
T 3hyh_A          251 PLNRISIHEIMQDDWFKV  268 (275)
T ss_dssp             GGGSCCHHHHHHCHHHHT
T ss_pred             hhHCcCHHHHHcCccccc
Confidence            999999999999999974

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=9.3e-64  Score=468.40  Aligned_cols=252  Identities=25%  Similarity=0.424  Sum_probs=216.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++++.||+|+||+||+|++..+|+.||||+++..   ......+.+|+++++.+.      |||||+++++|++++.
T Consensus        24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~------HpnIV~~~~~~~~~~~   97 (350)
T 4b9d_A           24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMK------HPNIVQYRESFEENGS   97 (350)
T ss_dssp             CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCC------CTTBCCEEEEEEETTE
T ss_pred             cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCC------CCCCCcEEEEEEECCE
Confidence            5899999999999999999999999999999999753   234456788999999885      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +||||||| ||+|.++|...+...+++..++.|+.||+.||+|||++|||||||||+||||                   
T Consensus        98 ~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl-------------------  158 (350)
T 4b9d_A           98 LYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL-------------------  158 (350)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEE-------------------
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEE-------------------
Confidence            99999999 9999999987766678999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           +.++.+||+|||+|......   ..+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.
T Consensus       159 -----~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~  233 (350)
T 4b9d_A          159 -----TKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNL  233 (350)
T ss_dssp             -----CTTCCEEECSTTEESCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             -----CCCCCEEEcccccceeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHH
Confidence                 45678999999999865432   2456899999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +.+|.....+                                                 ..+..+|.++.+||.+||+.|
T Consensus       234 ~~~i~~~~~~-------------------------------------------------~~~~~~s~~~~~li~~~L~~d  264 (350)
T 4b9d_A          234 VLKIISGSFP-------------------------------------------------PVSLHYSYDLRSLVSQLFKRN  264 (350)
T ss_dssp             HHHHHHTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHcCCCC-------------------------------------------------CCCccCCHHHHHHHHHHccCC
Confidence            8777653221                                                 011356788999999999999


Q ss_pred             CCCCCCHHHHhCCccccC
Q 015867          379 PSERLTARQALNHPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~  396 (399)
                      |.+|||++|+|+||||++
T Consensus       265 P~~R~s~~e~l~hp~~~~  282 (350)
T 4b9d_A          265 PRDRPSVNSILEKGFIAK  282 (350)
T ss_dssp             GGGSCCHHHHHTSHHHHT
T ss_pred             hhHCcCHHHHhcCHHhhc
Confidence            999999999999999975

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=6.1e-63  Score=455.43  Aligned_cols=251  Identities=28%  Similarity=0.484  Sum_probs=212.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEc---cCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDR---QTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ++|++++.||+|+||+||+|++.   .+++.||||++++..   .....+..|+++++.+      .|||||+++++|++
T Consensus        24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l------~HpnIv~l~~~~~~   97 (304)
T 3ubd_A           24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV------NHPFIVKLHYAFQT   97 (304)
T ss_dssp             GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCC------CCTTEECEEEEEEE
T ss_pred             cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHC------CCCCCCeEEEEEEE
Confidence            47999999999999999999874   468899999996532   1223345566555554      57999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ++.+||||||| ||+|.+++.+.+  .+++..++.|+.||+.||+|||++|||||||||+|||+                
T Consensus        98 ~~~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl----------------  159 (304)
T 3ubd_A           98 EGKLYLILDFLRGGDLFTRLSKEV--MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL----------------  159 (304)
T ss_dssp             TTEEEEEECCCTTCEEHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE----------------
T ss_pred             CCEEEEEEEcCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEE----------------
Confidence            99999999999 999999998876  69999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                              +.++.+||+|||+|...   .....+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+.
T Consensus       160 --------~~~g~vKl~DFGla~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~  231 (304)
T 3ubd_A          160 --------DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR  231 (304)
T ss_dssp             --------CTTSCEEEESSEEEEC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             --------cCCCCEEecccccceeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH
Confidence                    45678999999998753   2334567899999999999999999999999999999999999999999988


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+.+..|.+....+|                                                  ..+|+++.+||.+||
T Consensus       232 ~~~~~~i~~~~~~~p--------------------------------------------------~~~s~~~~~li~~~L  261 (304)
T 3ubd_A          232 KETMTMILKAKLGMP--------------------------------------------------QFLSPEAQSLLRMLF  261 (304)
T ss_dssp             HHHHHHHHHCCCCCC--------------------------------------------------TTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCCCC--------------------------------------------------CcCCHHHHHHHHHHc
Confidence            888887765432222                                                  346788999999999


Q ss_pred             ccCCCCCCC-----HHHHhCCccccCCC
Q 015867          376 RYDPSERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       376 ~~dP~~R~t-----~~ell~hp~f~~~~  398 (399)
                      +.||.+|||     ++|+++||||++++
T Consensus       262 ~~dP~~R~ta~~~~~~eil~Hp~f~~id  289 (304)
T 3ubd_A          262 KRNPANRLGAGPDGVEEIKRHSFFSTID  289 (304)
T ss_dssp             CSSGGGSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             ccCHHHCCCCCcCCHHHHHcCccccCCC
Confidence            999999998     57999999999875

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=3.9e-62  Score=467.61  Aligned_cols=252  Identities=27%  Similarity=0.447  Sum_probs=221.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      ++|+++++||+|+||.||+|++..+|+.||||++.... .....+.+|+.+++.+.      |||||+++++|.+++.+|
T Consensus       151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~------HpnIV~l~~~~~~~~~~~  224 (423)
T 4fie_A          151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ------HENVVEMYNSYLVGDELW  224 (423)
T ss_dssp             GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCC------CTTBCCEEEEEEETTEEE
T ss_pred             HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCC------CCCCCceEEEEEECCEEE
Confidence            56999999999999999999999999999999997533 23456778999999985      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      |||||| ||+|.+++...+   +++..++.|+.||+.||+|||++|||||||||+||||                     
T Consensus       225 iVmEy~~gG~L~~~i~~~~---l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl---------------------  280 (423)
T 4fie_A          225 VVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILL---------------------  280 (423)
T ss_dssp             EEEECCTTEEHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEE---------------------
T ss_pred             EEEeCCCCCcHHHHHhccC---CCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE---------------------
Confidence            999999 999999998654   9999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                         +.++.+||+|||+|....   ....+.+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+..+.+.
T Consensus       281 ---~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~  357 (423)
T 4fie_A          281 ---THDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMK  357 (423)
T ss_dssp             ---CTTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHH
T ss_pred             ---cCCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHH
Confidence               456789999999987643   23467899999999999999999999999999999999999999999988888777


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .|.....+.                                               ...+..+|.++.+||.+||+.||.
T Consensus       358 ~i~~~~~~~-----------------------------------------------~~~~~~~s~~~~dli~~~L~~dP~  390 (423)
T 4fie_A          358 MIRDNLPPR-----------------------------------------------LKNLHKVSPSLKGFLDRLLVRDPA  390 (423)
T ss_dssp             HHHHSCCCC-----------------------------------------------CSCTTSSCHHHHHHHHHHSCSSTT
T ss_pred             HHHcCCCCC-----------------------------------------------CcccccCCHHHHHHHHHHcCCChh
Confidence            765432110                                               012245788999999999999999


Q ss_pred             CCCCHHHHhCCccccCC
Q 015867          381 ERLTARQALNHPFFRNL  397 (399)
Q Consensus       381 ~R~t~~ell~hp~f~~~  397 (399)
                      +|||++|+|+||||++.
T Consensus       391 ~R~ta~ell~Hp~~~~~  407 (423)
T 4fie_A          391 QRATAAELLKHPFLAKA  407 (423)
T ss_dssp             TSCCHHHHTTCGGGGGC
T ss_pred             HCcCHHHHhcCHHhcCC
Confidence            99999999999999864

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=7.4e-61  Score=459.25  Aligned_cols=285  Identities=28%  Similarity=0.504  Sum_probs=229.7

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|++++.||+|+||+||+|++..+|+.||||+++...   .....+.+|+++|+.+.      |||||++++++..
T Consensus        51 ~i~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~l~~~~~~  124 (398)
T 4b99_A           51 DVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK------HDNIIAIKDILRP  124 (398)
T ss_dssp             CCCSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCC------CTTBCCEEEECCC
T ss_pred             CCCCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcC------CCCcceEeeeeec
Confidence            34578999999999999999999999999999999996432   23345677999998885      5999999998753


Q ss_pred             ------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 ------RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                            .+.+|||||||+|+|.+++.+.+  .+++..++.|+.||+.||+|||++|||||||||+|||+           
T Consensus       125 ~~~~~~~~~~~ivmE~~~g~L~~~i~~~~--~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~-----------  191 (398)
T 4b99_A          125 TVPYGEFKSVYVVLDLMESDLHQIIHSSQ--PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLV-----------  191 (398)
T ss_dssp             SSCTTTCCCEEEEEECCSEEHHHHHTSSS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE-----------
T ss_pred             ccccccCCEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCcccccc-----------
Confidence                  46899999999888999998765  69999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCC-------CCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHh
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-------QNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~  285 (399)
                                   +.++.+||+|||+|....       ....+.+||+.|||||++.+. .|+.++||||+||++|||++
T Consensus       192 -------------~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~  258 (398)
T 4b99_A          192 -------------NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA  258 (398)
T ss_dssp             -------------CTTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHH
T ss_pred             -------------CCCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHH
Confidence                         457789999999987532       233567999999999999876 57999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |++||.+.+..+++..|....+.++...+..........+...    +|.               ..........+.++.
T Consensus       259 G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~~~~~s~  319 (398)
T 4b99_A          259 RRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQS----LPP---------------RQPVPWETVYPGADR  319 (398)
T ss_dssp             TSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHS----SCC---------------CCCCCHHHHSTTCCH
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhc----CCC---------------cCCCCHHHhCCCCCH
Confidence            9999999999999999999999887654332211111000000    000               000001112346788


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ++.|||.+||+.||.+|||++|+|+||||++..
T Consensus       320 ~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  352 (398)
T 4b99_A          320 QALSLLGRMLRFEPSARISAAAALRHPFLAKYH  352 (398)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTSGGGTTTC
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHhcCHhhCcCC
Confidence            999999999999999999999999999999763

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=3.6e-61  Score=441.43  Aligned_cols=254  Identities=23%  Similarity=0.403  Sum_probs=210.1

Q ss_pred             cCCCE-EEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           64 LTPRY-KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        64 ~~~~y-~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ..++| ++.++||+|+||+||+|.+..+++.||+|++....   .....+..|+++++.++      |||||+++++|.+
T Consensus        23 ~~gr~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~------HpnIV~~~~~~~~   96 (290)
T 3fpq_A           23 NDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ------HPNIVRFYDSWES   96 (290)
T ss_dssp             TTSSEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCC------CTTBCCEEEEEEE
T ss_pred             CCCceEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC------CCCCCcEEEEEee
Confidence            34566 78889999999999999999999999999996532   33456778999988885      5999999999865


Q ss_pred             ----CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccCCC
Q 015867          140 ----RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       140 ----~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~~~  212 (399)
                          ++.+||||||| ||+|.+++.+.+  .+++..++.|+.||+.||+|||++|  ||||||||+||||+         
T Consensus        97 ~~~~~~~~~lvmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~---------  165 (290)
T 3fpq_A           97 TVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT---------  165 (290)
T ss_dssp             EETTEEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEES---------
T ss_pred             ccCCCcEEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEE---------
Confidence                45789999999 999999998876  6999999999999999999999999  99999999999993         


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                    +.++.+||+|||+|..... ...+.+||+.|||||++.+ .|+.++|||||||++|||+||++||.
T Consensus       166 --------------~~~g~vKl~DFGla~~~~~~~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~  230 (290)
T 3fpq_A          166 --------------GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYS  230 (290)
T ss_dssp             --------------STTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred             --------------CCCCCEEEEeCcCCEeCCCCccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCC
Confidence                          2367899999999976433 3457789999999999875 69999999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+....+....... ..|.                                              ..+..+++++.+||
T Consensus       231 ~~~~~~~~~~~i~~~-~~~~----------------------------------------------~~~~~~~~~~~~li  263 (290)
T 3fpq_A          231 ECQNAAQIYRRVTSG-VKPA----------------------------------------------SFDKVAIPEVKEII  263 (290)
T ss_dssp             TCSSHHHHHHHHTTT-CCCG----------------------------------------------GGGGCCCHHHHHHH
T ss_pred             CCCcHHHHHHHHHcC-CCCC----------------------------------------------CCCccCCHHHHHHH
Confidence            766554433221110 0110                                              11234567899999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      .+||+.||.+|||++|+|+||||++
T Consensus       264 ~~~L~~dP~~R~s~~e~l~Hp~~~~  288 (290)
T 3fpq_A          264 EGCIRQNKDERYSIKDLLNHAFFQE  288 (290)
T ss_dssp             HHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred             HHHccCChhHCcCHHHHhcCccccC
Confidence            9999999999999999999999985

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.8e-61  Score=448.69  Aligned_cols=251  Identities=25%  Similarity=0.323  Sum_probs=212.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      +.|++.++||+|+||.||+|++..+|+.||||+++...    ....|+.+++.+      .|||||++++++.+++.+||
T Consensus        58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~----~~~~E~~il~~l------~HpnIV~l~~~~~~~~~~~i  127 (336)
T 4g3f_A           58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV----FRVEELVACAGL------SSPRIVPLYGAVREGPWVNI  127 (336)
T ss_dssp             TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT----CCTHHHHTTTTC------CCTTBCCEEEEEEETTEEEE
T ss_pred             hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH----hHHHHHHHHHhC------CCCCCCcEEEEEEECCEEEE
Confidence            46999999999999999999999999999999997532    223577777666      46999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||| ||+|.+++++.+  .+++..++.|+.||+.||+|||++|||||||||+||||+.                    
T Consensus       128 vmEy~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~--------------------  185 (336)
T 4g3f_A          128 FMELLEGGSLGQLIKQMG--CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSS--------------------  185 (336)
T ss_dssp             EECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECT--------------------
T ss_pred             EEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeC--------------------
Confidence            99999 999999998876  6999999999999999999999999999999999999943                    


Q ss_pred             cCCCCC-ceEEeecCCcccCCCC--------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          225 CLPKSS-AIKLIDFGSTAFDNQN--------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       225 ~~~~~~-~~kl~Dfg~a~~~~~~--------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                          ++ .+||+|||+|......        ....+||+.|||||++.+..|+.++|||||||++|||++|++||.+.+.
T Consensus       186 ----~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~  261 (336)
T 4g3f_A          186 ----DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFR  261 (336)
T ss_dssp             ----TSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCC
T ss_pred             ----CCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCH
Confidence                43 6999999998753321        2346899999999999999999999999999999999999999988776


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+....|.....+                                               ....++.+++++.+||.+||
T Consensus       262 ~~~~~~i~~~~~~-----------------------------------------------~~~~~~~~s~~~~~li~~~L  294 (336)
T 4g3f_A          262 GPLCLKIASEPPP-----------------------------------------------IREIPPSCAPLTAQAIQEGL  294 (336)
T ss_dssp             SCCHHHHHHSCCG-----------------------------------------------GGGSCTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCCC-----------------------------------------------chhcCccCCHHHHHHHHHHc
Confidence            6666555442110                                               01123567889999999999


Q ss_pred             ccCCCCCCCHHHH-------------hCCccccCCCC
Q 015867          376 RYDPSERLTARQA-------------LNHPFFRNLNE  399 (399)
Q Consensus       376 ~~dP~~R~t~~el-------------l~hp~f~~~~e  399 (399)
                      +.||.+|||+.|+             |+|||+++..|
T Consensus       295 ~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~~~~  331 (336)
T 4g3f_A          295 RKEPVHRASAMELRRKVGKALQEVGGLKSPWKGEYKE  331 (336)
T ss_dssp             CSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSSCCC
T ss_pred             cCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCCCCC
Confidence            9999999999997             68999988754

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.9e-59  Score=444.84  Aligned_cols=297  Identities=25%  Similarity=0.390  Sum_probs=223.3

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEc---cCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDR---QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+.++|++.++||+|+||+||+|+++   .+++.||||.+.... .......|+++++.+.     +||||++++++|.
T Consensus        17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~-~~~~~~~E~~~l~~~~-----~h~nIv~l~~~~~   90 (361)
T 4f9c_A           17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS-HPIRIAAELQCLTVAG-----GQDNVMGVKYCFR   90 (361)
T ss_dssp             GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS-CHHHHHHHHHHHHHTC-----SBTTBCCCSEEEE
T ss_pred             CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc-CHHHHHHHHHHHHHhc-----CCCCCceEEEEEE
Confidence            346678999999999999999999874   467899999986543 3355677888888774     4799999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +.+++|+||||| |++|.+++.     .+++..++.|+.||+.||+|||++|||||||||+|||++.             
T Consensus        91 ~~~~~~lvmE~~~g~~L~~~~~-----~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~-------------  152 (361)
T 4f9c_A           91 KNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR-------------  152 (361)
T ss_dssp             ETTEEEEEEECCCCCCHHHHHT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET-------------
T ss_pred             ECCEEEEEEeCCCcccHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC-------------
Confidence            999999999999 899999984     4999999999999999999999999999999999999953             


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC-------------------------------CCcccccCCCccchhhhhCC-
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ-------------------------------NHSSIVSTRHYRAPEVILGL-  265 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------------------------------~~~~~~gt~~y~aPE~~~~~-  265 (399)
                                ..+.+||+|||+|.....                               ...+.+||+.|||||++.+. 
T Consensus       153 ----------~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~  222 (361)
T 4f9c_A          153 ----------RLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCP  222 (361)
T ss_dssp             ----------TTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCS
T ss_pred             ----------CCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCC
Confidence                      236799999999864221                               12345899999999999876 


Q ss_pred             CCCCcchhHHHHHHHHHHHhCCCCCC-CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHH
Q 015867          266 GWSYPCDMWSVGCILVELCTGEALFQ-THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIK  344 (399)
Q Consensus       266 ~~~~~~DiwslG~il~ell~g~~Pf~-~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  344 (399)
                      .|+.++||||+||++|+|++|+.||. +.++.+++..|....+..+...............     ...|... ......
T Consensus       223 ~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~-----~~~p~~~-~~~~~~  296 (361)
T 4f9c_A          223 NQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCS-----KEVPAQD-LRKLCE  296 (361)
T ss_dssp             CCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEES-----SCCCCCC-HHHHHH
T ss_pred             CCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhcccccccc-----ccCcchh-hhHHHH
Confidence            58999999999999999999999985 5667788999998888654443332211111000     0111100 000000


Q ss_pred             HHHhh----------hhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          345 AVKKL----------DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       345 ~~~~~----------~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .....          ..........+..+|+++.|||.+||+.||.+|+|++|+|+||||++++
T Consensus       297 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~  360 (361)
T 4f9c_A          297 RLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS  360 (361)
T ss_dssp             HHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred             hhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence            00000          0001111234467889999999999999999999999999999999985

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=4.5e-58  Score=424.25  Aligned_cols=251  Identities=26%  Similarity=0.371  Sum_probs=194.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC--
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN--  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~--  141 (399)
                      ++|++++.||+|+||+||+|++..+|+.||||+++...  .....+.+|+++++.+.      |||||+++++|.+.+  
T Consensus         5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~------HpnIV~~~~~~~~~~~~   78 (299)
T 4g31_A            5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE------HPGIVRYFNAWLEKNTT   78 (299)
T ss_dssp             HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCC------CTTBCCEEEEEEEEC--
T ss_pred             hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEEecCcc
Confidence            46999999999999999999999999999999996532  23355677888887764      699999999987543  


Q ss_pred             ----------eEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccccc
Q 015867          142 ----------HICIVFEKL-GPSLFDFLKRNKY-CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK  209 (399)
Q Consensus       142 ----------~~~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~  209 (399)
                                ++|+||||| ||+|.+++..... ...++..++.|+.||+.||+|||++|||||||||+||||       
T Consensus        79 ~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl-------  151 (299)
T 4g31_A           79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFF-------  151 (299)
T ss_dssp             --------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-------
T ss_pred             ccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEE-------
Confidence                      479999999 9999999987542 124567789999999999999999999999999999999       


Q ss_pred             CCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC---------------CcccccCCCccchhhhhCCCCCCcchhH
Q 015867          210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---------------HSSIVSTRHYRAPEVILGLGWSYPCDMW  274 (399)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---------------~~~~~gt~~y~aPE~~~~~~~~~~~Diw  274 (399)
                                       +.++.+||+|||+|......               ..+.+||+.|||||++.+..|+.++|||
T Consensus       152 -----------------~~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~Diw  214 (299)
T 4g31_A          152 -----------------TMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIF  214 (299)
T ss_dssp             -----------------CTTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHHH
T ss_pred             -----------------CCCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHH
Confidence                             45678999999998763321               2345899999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH-hCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhh
Q 015867          275 SVGCILVELCTGEALFQTHENLEHLAMMERA-LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK  353 (399)
Q Consensus       275 slG~il~ell~g~~Pf~~~~~~~~~~~i~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  353 (399)
                      ||||++|||++   ||.+.  .+....+... ...+|+.                                         
T Consensus       215 SlGvilyell~---Pf~~~--~~~~~~~~~~~~~~~p~~-----------------------------------------  248 (299)
T 4g31_A          215 SLGLILFELLY---PFSTQ--MERVRTLTDVRNLKFPPL-----------------------------------------  248 (299)
T ss_dssp             HHHHHHHHHHS---CCSSH--HHHHHHHHHHHTTCCCHH-----------------------------------------
T ss_pred             HHHHHHHHHcc---CCCCc--cHHHHHHHHHhcCCCCCC-----------------------------------------
Confidence            99999999996   78642  2222222221 1222221                                         


Q ss_pred             hhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       354 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                            .+..++.+.+||.+||+.||.+|||+.|+|+||||++++
T Consensus       249 ------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          249 ------FTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             ------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             ------CcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence                  123455678999999999999999999999999999875

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=1.7e-57  Score=454.46  Aligned_cols=255  Identities=26%  Similarity=0.426  Sum_probs=213.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++++.||+|+||.||+|++..+|+.||||++.+..    ........|..++..+.   ...|||||+++++|++.
T Consensus       188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~---~~~HP~IV~l~~~f~~~  264 (689)
T 3v5w_A          188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS---TGDCPFIVCMSYAFHTP  264 (689)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHS---SSCCTTBCCEEEEEECS
T ss_pred             hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHh---hCCCCCEeEEEEEEEEC
Confidence            367999999999999999999999999999999997532    12233444555555444   34689999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+||||||| ||+|.++|.+.+  .+++..++.|+.||+.||+|||++|||||||||+||||                 
T Consensus       265 ~~lylVmEy~~GGdL~~~l~~~~--~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILl-----------------  325 (689)
T 3v5w_A          265 DKLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL-----------------  325 (689)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE-----------------
T ss_pred             CEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEE-----------------
Confidence            9999999999 999999998876  69999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccC-CCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH-
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFD-NQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENL-  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-  296 (399)
                             +.++.+||+|||+|... .....+.+||+.|||||++.+ ..|+.++|||||||++|||++|.+||.+.+.. 
T Consensus       326 -------d~~G~vKL~DFGlA~~~~~~~~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~  398 (689)
T 3v5w_A          326 -------DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD  398 (689)
T ss_dssp             -------CTTSCEEECCCTTCEECSSCCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC
T ss_pred             -------eCCCCEEecccceeeecCCCCCCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                   45778999999999764 334567899999999999974 58999999999999999999999999764332 


Q ss_pred             --HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          297 --EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       297 --~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                        +....+....                                                  ...+..+|+++++||.+|
T Consensus       399 ~~~i~~~i~~~~--------------------------------------------------~~~p~~~S~~a~dLI~~l  428 (689)
T 3v5w_A          399 KHEIDRMTLTMA--------------------------------------------------VELPDSFSPELRSLLEGL  428 (689)
T ss_dssp             HHHHHHHHHHCC--------------------------------------------------CCCCTTSCHHHHHHHHHH
T ss_pred             HHHHHHhhcCCC--------------------------------------------------CCCCccCCHHHHHHHHHH
Confidence              2222222211                                                  122346788999999999


Q ss_pred             cccCCCCCCC-----HHHHhCCccccCCC
Q 015867          375 LRYDPSERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       375 L~~dP~~R~t-----~~ell~hp~f~~~~  398 (399)
                      |+.||.+|++     ++||++||||++++
T Consensus       429 L~~dP~~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          429 LQRDVNRRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             TCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             ccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence            9999999998     79999999999985

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=9.3e-57  Score=450.81  Aligned_cols=260  Identities=29%  Similarity=0.447  Sum_probs=226.0

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +.++|++++.||+|+||.||+|.++.+|+.||||++.... .....+..|+++|+.++      ||||++++++|.+.+.
T Consensus       155 il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~------hpnIv~l~~~~~~~~~  228 (573)
T 3uto_A          155 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR------HPTLVNLHDAFEDDNE  228 (573)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTC------CTTBCCEEEEEECSSE
T ss_pred             CccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCC------CCCCCeEEEEEEECCE
Confidence            4468999999999999999999999999999999987533 33456778999999885      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +||||||| ||+|.+++..... .+++..++.|+.||+.||+|||++||+||||||+|||++.                 
T Consensus       229 ~~iv~E~~~gg~L~~~i~~~~~-~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~-----------------  290 (573)
T 3uto_A          229 MVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-----------------  290 (573)
T ss_dssp             EEEEEECCCCCBHHHHHTCTTS-CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-----------------
T ss_pred             EEEEEeecCCCcHHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccC-----------------
Confidence            99999999 9999999965432 5999999999999999999999999999999999999953                 


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           +..+.+||+|||+|......  ..+.+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+..+.+
T Consensus       291 -----~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~  365 (573)
T 3uto_A          291 -----KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL  365 (573)
T ss_dssp             -----SSCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH
T ss_pred             -----CCCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHH
Confidence                 23578999999999875443  35678999999999999999999999999999999999999999999988888


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..|......++.                                              ..++.+|.++++||.+||+.||
T Consensus       366 ~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~dli~~~L~~dp  399 (573)
T 3uto_A          366 RNVKSCDWNMDD----------------------------------------------SAFSGISEDGKDFIRKLLLADP  399 (573)
T ss_dssp             HHHHTTCCCCCS----------------------------------------------GGGTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHhCCCCCCc----------------------------------------------ccccCCCHHHHHHHHHHccCCh
Confidence            877654433322                                              1224578889999999999999


Q ss_pred             CCCCCHHHHhCCccccCCC
Q 015867          380 SERLTARQALNHPFFRNLN  398 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~~  398 (399)
                      .+|||+.|+|+||||+..+
T Consensus       400 ~~R~t~~e~l~Hpw~~~~~  418 (573)
T 3uto_A          400 NTRMTIHQALEHPWLTPGN  418 (573)
T ss_dssp             GGSCCHHHHHHSTTTSCCC
T ss_pred             hHCcCHHHHhcCcCcCCCC
Confidence            9999999999999999753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=8.3e-57  Score=415.25  Aligned_cols=252  Identities=21%  Similarity=0.323  Sum_probs=209.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      .++|.+.+.||+|+||+||+|++.     .++..||||+++... .....+..|+++++.++      |||||++++++.
T Consensus        12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~------HpnIV~l~g~~~   85 (299)
T 4asz_A           12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQ------HEHIVKFYGVCV   85 (299)
T ss_dssp             GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCC------CTTBCCEEEEEC
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCC------CCCCccEEEEEe
Confidence            357999999999999999999864     468899999997532 34566788888888775      699999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcC-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNK-----------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~-----------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                      +++.+||||||| +|+|.+++.+.+           ...+++..+..|+.||+.||+|||+++||||||||+|||+    
T Consensus        86 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl----  161 (299)
T 4asz_A           86 EGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLV----  161 (299)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEE----
Confidence            999999999999 999999997642           2369999999999999999999999999999999999999    


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHH
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILV  281 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  281 (399)
                                          +.++.+||+|||+|+.....     .....||+.|||||++.+..|+.++|||||||++|
T Consensus       162 --------------------~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~  221 (299)
T 4asz_A          162 --------------------GENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLW  221 (299)
T ss_dssp             --------------------CGGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHH
T ss_pred             --------------------CCCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHH
Confidence                                45678999999998653221     23356999999999999999999999999999999


Q ss_pred             HHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccc
Q 015867          282 ELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV  360 (399)
Q Consensus       282 ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (399)
                      ||+| |+.||.+.+..+....+......                                                 ..+
T Consensus       222 Ellt~G~~Pf~~~~~~~~~~~i~~~~~~-------------------------------------------------~~p  252 (299)
T 4asz_A          222 EIFTYGKQPWYQLSNNEVIECITQGRVL-------------------------------------------------QRP  252 (299)
T ss_dssp             HHHTTTCCTTTTSCHHHHHHHHHHTCCC-------------------------------------------------CCC
T ss_pred             HHHcCCCCCCCCCCHHHHHHHHHcCCCC-------------------------------------------------CCC
Confidence            9998 99999998888777776553211                                                 112


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       361 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +.++.++.+||.+||+.||.+|||++||  |+||+++
T Consensus       253 ~~~~~~~~~li~~cl~~dP~~RPs~~~i--~~~L~~~  287 (299)
T 4asz_A          253 RTCPQEVYELMLGCWQREPHMRKNIKGI--HTLLQNL  287 (299)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHH--HHHHHHH
T ss_pred             ccchHHHHHHHHHHcCCChhHCcCHHHH--HHHHHHH
Confidence            3567889999999999999999999999  4576653

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2e-54  Score=412.17  Aligned_cols=338  Identities=41%  Similarity=0.716  Sum_probs=268.9

Q ss_pred             CCCCceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcce
Q 015867           51 DREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHC  130 (399)
Q Consensus        51 ~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i  130 (399)
                      +....+.+..+..+.++|+++++||+|+||.||+|++..+++.||||+++...........|..+++.+.+ ....|+||
T Consensus        20 ~~~~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~-~~~~h~~i   98 (360)
T 3llt_A           20 DEIVHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQN-DDINNNNI   98 (360)
T ss_dssp             CGGGSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCHHHHHHHHHHHHHHHHTCC-CSTTGGGB
T ss_pred             ccceeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccchhhhhhhHHHHHHHHHhcc-cCCCCCCe
Confidence            33445677888999999999999999999999999999999999999998666666777889999999874 34468999


Q ss_pred             eeeceeeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccC
Q 015867          131 VQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       131 v~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~  210 (399)
                      +++++++...+..++||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.+...+.
T Consensus        99 v~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~  178 (360)
T 3llt_A           99 VKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKS  178 (360)
T ss_dssp             CCEEEEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEE
T ss_pred             ecccceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEcccccccc
Confidence            99999999999999999999999999999877667999999999999999999999999999999999999964211000


Q ss_pred             C-CCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          211 P-GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       211 ~-~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                      . .......+.........++.+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       179 ~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p  258 (360)
T 3llt_A          179 LITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLL  258 (360)
T ss_dssp             EEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSCCCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             ccchhcccccccccccccCCCCEEEEeccCceecCCCCcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCC
Confidence            0 000000000000000236789999999998877777788899999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccc--cccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEK--YFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL  367 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (399)
                      |...+..+.+..+.....++|..+..........  .........||..............      .........+..+
T Consensus       259 f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~------~~~~~~~~~~~~l  332 (360)
T 3llt_A          259 FRTHEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKK------CLPLYKIIKHELF  332 (360)
T ss_dssp             CCCSSHHHHHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHT------CCCHHHHCCCHHH
T ss_pred             CCCCcHHHHHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhh------cccccccchHHHH
Confidence            9999999999999999999999887776543322  2233345567776554444333221      1112223446788


Q ss_pred             HHHHHHccccCCCCCCCHHHHhCCcccc
Q 015867          368 TDLLHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      .+||.+||+.||.+|||++|+|+||||+
T Consensus       333 ~~li~~~L~~dP~~Rpta~elL~hp~f~  360 (360)
T 3llt_A          333 CDFLYSILQIDPTLRPSPAELLKHKFLE  360 (360)
T ss_dssp             HHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred             HHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence            9999999999999999999999999996

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=2.1e-55  Score=406.05  Aligned_cols=251  Identities=24%  Similarity=0.357  Sum_probs=200.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .+++++.++||+|+||+||+|+...   .||||+++..   ......+..|+.+++.++      |||||++++++.. +
T Consensus        35 ~~~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~------HpNIV~l~g~~~~-~  104 (307)
T 3omv_A           35 ASEVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTR------HVNILLFMGYMTK-D  104 (307)
T ss_dssp             TTSCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCC------CTTBCCEEEEECS-S
T ss_pred             HHHeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEEEC-C
Confidence            3578999999999999999997543   4999998643   233456778888888775      6999999998764 5


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+||||||| ||+|.+++..... .+++..+..|+.||+.||+|||+++||||||||+||||+                 
T Consensus       105 ~~~iVmEy~~gGsL~~~l~~~~~-~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~-----------------  166 (307)
T 3omv_A          105 NLAIVTQWCEGSSLYKHLHVQET-KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLH-----------------  166 (307)
T ss_dssp             SCEEEEECCSSCBHHHHHHTSCC-CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEE-----------------
T ss_pred             eEEEEEEcCCCCCHHHHHhhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEEC-----------------
Confidence            689999999 9999999976543 699999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                             .++.+||+|||+|.....     .....+||+.|||||++.+.   +|+.++|||||||+||||+||+.||.+
T Consensus       167 -------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~  239 (307)
T 3omv_A          167 -------EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSH  239 (307)
T ss_dssp             -------TTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             -------CCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCC
Confidence                   467899999999976332     23456899999999999743   689999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+....+..+.......|.                                            ....++.++.++.+||.
T Consensus       240 ~~~~~~~~~~~~~~~~~p~--------------------------------------------~~~~~~~~~~~l~~li~  275 (307)
T 3omv_A          240 INNRDQIIFMVGRGYASPD--------------------------------------------LSKLYKNCPKAMKRLVA  275 (307)
T ss_dssp             CCCHHHHHHHHHTTCCCCC--------------------------------------------STTSCTTSCHHHHHHHH
T ss_pred             CChHHHHHHHHhcCCCCCC--------------------------------------------cccccccchHHHHHHHH
Confidence            7776655544332211110                                            01123467888999999


Q ss_pred             HccccCCCCCCCHHHH------hCCccc
Q 015867          373 GLLRYDPSERLTARQA------LNHPFF  394 (399)
Q Consensus       373 ~~L~~dP~~R~t~~el------l~hp~f  394 (399)
                      +||+.||.+|||+.|+      |+|+|-
T Consensus       276 ~cl~~dP~~RPs~~ei~~~Le~l~~~lp  303 (307)
T 3omv_A          276 DCVKKVKEERPLFPQILSSIELLQHSLP  303 (307)
T ss_dssp             HHTCSSSTTSCCHHHHHHHHHHHHTTCC
T ss_pred             HHcCCCHhHCcCHHHHHHHHHHHhccCC
Confidence            9999999999999875      567764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=3.3e-55  Score=409.96  Aligned_cols=248  Identities=21%  Similarity=0.314  Sum_probs=204.1

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+|.+.++||+|+||+||+|++.     .+++.||||+++... .....+..|++++..++      |||||++++++.
T Consensus        40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~------HpnIV~l~g~~~  113 (329)
T 4aoj_A           40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ------HQHIVRFFGVCT  113 (329)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCC------CTTBCCEEEEEC
T ss_pred             HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCC------CCCCCcEEEEEE
Confidence            357999999999999999999864     468899999997532 34466788888888875      599999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEee
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY-------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVS  204 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~-------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~  204 (399)
                      +.+.+||||||| +|+|.+++.+...             ..+++..+..|+.||+.||+|||+++||||||||+||||+ 
T Consensus       114 ~~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~-  192 (329)
T 4aoj_A          114 EGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVG-  192 (329)
T ss_dssp             SSSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE-
T ss_pred             ECCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEEC-
Confidence            999999999999 9999999976431             3589999999999999999999999999999999999994 


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCCCCcchhHHHHHH
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  279 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  279 (399)
                                             .++.+||+|||+|+....     .....+||+.|||||++.+..|+.++|||||||+
T Consensus       193 -----------------------~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvv  249 (329)
T 4aoj_A          193 -----------------------QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV  249 (329)
T ss_dssp             -----------------------TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHH
T ss_pred             -----------------------CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHH
Confidence                                   567899999999875322     1235679999999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          280 LVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       280 l~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      ||||+| |+.||.+.+..+.+..+......                                                 .
T Consensus       250 l~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~-------------------------------------------------~  280 (329)
T 4aoj_A          250 LWEIFTYGKQPWYQLSNTEAIDCITQGREL-------------------------------------------------E  280 (329)
T ss_dssp             HHHHHTTSCCTTCSSCHHHHHHHHHHTCCC-------------------------------------------------C
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHcCCCC-------------------------------------------------C
Confidence            999999 99999988887777666543211                                                 1


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      .++.+++++.+||.+||+.||.+|||++||+++
T Consensus       281 ~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~  313 (329)
T 4aoj_A          281 RPRACPPEVYAIMRGCWQREPQQRHSIKDVHAR  313 (329)
T ss_dssp             CCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHH
T ss_pred             CcccccHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            123567889999999999999999999999763

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=3.9e-55  Score=405.73  Aligned_cols=248  Identities=19%  Similarity=0.239  Sum_probs=208.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ..++++.++||+|+||+||+|...     .+++.||||+++...  .....+..|+.++..++      |||||++++++
T Consensus        25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~------HpNIV~l~g~~   98 (308)
T 4gt4_A           25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQ------HPNVVCLLGVV   98 (308)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCC------CTTBCCEEEEE
T ss_pred             HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCC------CCCCCCcceEE
Confidence            356999999999999999999853     467899999986432  33467888999999985      59999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNK--------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL  202 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll  202 (399)
                      .+++.++|||||| +|+|.++|....              ...+++..+..|+.||+.||+|||+++||||||||+||||
T Consensus        99 ~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl  178 (308)
T 4gt4_A           99 TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLV  178 (308)
T ss_dssp             CSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE
T ss_pred             EECCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEE
Confidence            9999999999999 999999997532              1258999999999999999999999999999999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCC-----CCCcccccCCCccchhhhhCCCCCCcchhHHHH
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-----QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVG  277 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  277 (399)
                      +                        .++.+||+|||+++...     ...+..+||+.|||||++.+..|+.++||||||
T Consensus       179 ~------------------------~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfG  234 (308)
T 4gt4_A          179 Y------------------------DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYG  234 (308)
T ss_dssp             C------------------------GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             C------------------------CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHH
Confidence            4                        46779999999987532     223456899999999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhh
Q 015867          278 CILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV  356 (399)
Q Consensus       278 ~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  356 (399)
                      |+||||+| |..||.+.+..+....|......                                                
T Consensus       235 vvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~------------------------------------------------  266 (308)
T 4gt4_A          235 VVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL------------------------------------------------  266 (308)
T ss_dssp             HHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCC------------------------------------------------
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC------------------------------------------------
Confidence            99999998 89999998887777666432211                                                


Q ss_pred             hccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       357 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                       ..++.++.++.+||.+||+.||.+|||+.||+++
T Consensus       267 -~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          267 -PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence             1124567889999999999999999999999874

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=5.3e-54  Score=418.42  Aligned_cols=318  Identities=34%  Similarity=0.623  Sum_probs=255.4

Q ss_pred             eeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        57 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      ....++.+..+|++.+.||+|+||.||+|.+..+++.||||+++...........|+.+++.+.+.....|+||+.++++
T Consensus        88 ~~~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~  167 (429)
T 3kvw_A           88 VQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLEN  167 (429)
T ss_dssp             CCCTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEE
T ss_pred             cccCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEee
Confidence            33445667889999999999999999999999999999999998766666778889999999999888899999999999


Q ss_pred             eccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       137 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      +...+..++||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++.++          
T Consensus       168 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~----------  237 (429)
T 3kvw_A          168 FTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQG----------  237 (429)
T ss_dssp             EEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTT----------
T ss_pred             cccCCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCC----------
Confidence            9999999999999988999999987766799999999999999999999999999999999999995422          


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                                  ...+||+|||++........+.+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+..
T Consensus       238 ------------~~~vkL~DFG~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~  305 (429)
T 3kvw_A          238 ------------RSGIKVIDFGSSCYEHQRVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEG  305 (429)
T ss_dssp             ------------SCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             ------------CcceEEeecccceecCCcccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHH
Confidence                        23499999999988777777889999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHH----------HHHHhhhhhhhhhhccchhhhhH
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESI----------KAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      +.+..+....+.++..++........ ++.......+..........          ...........+........+++
T Consensus       306 ~~l~~i~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  384 (429)
T 3kvw_A          306 DQLACMIELLGMPSQKLLDASKRAKN-FVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPL  384 (429)
T ss_dssp             HHHHHHHHHHCCCCHHHHHTBTTHHH-HBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHH
T ss_pred             HHHHHHHHHcCCCCHHHHHhhhhhhh-ccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHH
Confidence            99999999999999988776543322 22221111110000000000          00000000011111122344778


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +.+||.+||+.||.+|||++|+|+||||++.
T Consensus       385 ~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~  415 (429)
T 3kvw_A          385 FLDFLKQCLEWDPAVRMTPGQALRHPWLRRR  415 (429)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSTTTC--
T ss_pred             HHHHHHHHCCCChhhCCCHHHHhCChhhccC
Confidence            9999999999999999999999999999874

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=6.3e-53  Score=397.73  Aligned_cols=333  Identities=44%  Similarity=0.820  Sum_probs=267.4

Q ss_pred             eeeccCCccCCCEEEEeeeccccceEEEEEEE-ccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           56 YVFNLGENLTPRYKILSKMGEGTFGRVLECWD-RQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        56 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ..+..++.+.++|++.+.||+|+||.||+|.+ ..+++.||||+++........+..|+++++.+.+.....++++++++
T Consensus         4 ~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~   83 (339)
T 1z57_A            4 LICQSGDVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQML   83 (339)
T ss_dssp             GTCSTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEE
T ss_pred             eeeecCCCccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeee
Confidence            34567788899999999999999999999998 56899999999987666667788999999999998888888999999


Q ss_pred             eeeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          135 NWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      +++...+..++||||++++|.+++...+...+++..+..++.||+.||+|||++||+||||||+|||++.++....... 
T Consensus        84 ~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~-  162 (339)
T 1z57_A           84 EWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNP-  162 (339)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC--
T ss_pred             cccccCCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCC-
Confidence            9999999999999999999999998877667999999999999999999999999999999999999965331110000 


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                          ..........++.+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||...+
T Consensus       163 ----~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  238 (339)
T 1z57_A          163 ----KIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHD  238 (339)
T ss_dssp             -------CEEEEESCCCEEECCCSSCEETTSCCCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSC
T ss_pred             ----ccccccccccCCCceEeeCcccccCccccccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCC
Confidence                0000000012667999999999887766677889999999999999999999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....+....+++|..++........   .......|+.............  ... .......+..+.++.+||.+|
T Consensus       239 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~l~~li~~~  312 (339)
T 1z57_A          239 SKEHLAMMERILGPLPKHMIQKTRKRKY---FHHDRLDWDEHSSAGRYVSRAC--KPL-KEFMLSQDVEHERLFDLIQKM  312 (339)
T ss_dssp             HHHHHHHHHHHHCSCCHHHHHHCSCGGG---EETTEECCCTTSHHHHHHHHHC--CCG-GGGCSCCSHHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCCHHHHhhccchhH---HhhccccccccccccchhhhcC--cch-hhhcccchhhHHHHHHHHHHH
Confidence            9999999999999999998887653322   2224456665432222211111  011 111223456678899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCCCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNLNE  399 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~~e  399 (399)
                      |+.||.+|||+.|+++||||+++.+
T Consensus       313 L~~dP~~Rpt~~ell~hp~f~~~~~  337 (339)
T 1z57_A          313 LEYDPAKRITLREALKHPFFDLLKK  337 (339)
T ss_dssp             TCSSTTTSCCHHHHTTSGGGGGGGC
T ss_pred             hCcCcccccCHHHHhcCHHHHHHhc
Confidence            9999999999999999999998753

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=7.6e-54  Score=403.95  Aligned_cols=249  Identities=20%  Similarity=0.317  Sum_probs=205.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccC-----CeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQT-----QERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|++.+.||+|+||+||+|.+..+     ++.||||+++...  .....+..|++++..+.|     |||||++++++
T Consensus        63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~h-----hpnIV~l~g~~  137 (353)
T 4ase_A           63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGH-----HLNVVNLLGAC  137 (353)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCC-----CTTBCCEEEEE
T ss_pred             HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCC-----CCcEEEEEEEE
Confidence            46899999999999999999987543     4789999996532  334568889999999974     68999999988


Q ss_pred             cc-CCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEE
Q 015867          138 DY-RNHICIVFEKL-GPSLFDFLKRNK--------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENIL  201 (399)
Q Consensus       138 ~~-~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIl  201 (399)
                      .. .+.+||||||| +|+|.++|+...              ...+++..+..|+.||+.||+|||+++||||||||+|||
T Consensus       138 ~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NIL  217 (353)
T 4ase_A          138 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNIL  217 (353)
T ss_dssp             CCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             EecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCcccee
Confidence            65 46799999999 999999997642              224899999999999999999999999999999999999


Q ss_pred             EeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHH
Q 015867          202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSV  276 (399)
Q Consensus       202 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  276 (399)
                      ++                        .++.+||+|||+|+.....     .+..+||+.|||||++.+..|+.++|||||
T Consensus       218 l~------------------------~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~  273 (353)
T 4ase_A          218 LS------------------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSF  273 (353)
T ss_dssp             EC------------------------GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             eC------------------------CCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeeh
Confidence            94                        4678999999999764332     234579999999999999999999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCcHHHHHH-HHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          277 GCILVELCT-GEALFQTHENLEHLAM-MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       277 G~il~ell~-g~~Pf~~~~~~~~~~~-i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      ||+||||+| |..||.+.+..+.+.. +.....                       .                       
T Consensus       274 Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~~-----------------------~-----------------------  307 (353)
T 4ase_A          274 GVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR-----------------------M-----------------------  307 (353)
T ss_dssp             HHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCC-----------------------C-----------------------
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCCC-----------------------C-----------------------
Confidence            999999998 9999988664443333 322111                       1                       


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                         ..++.+++++.+||.+||+.||.+|||+.||++|
T Consensus       308 ---~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          308 ---RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence               1123567889999999999999999999999987

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=6.2e-52  Score=393.58  Aligned_cols=338  Identities=46%  Similarity=0.846  Sum_probs=269.8

Q ss_pred             CCCCCceeeccCCccCCCEEEEeeeccccceEEEEEEEccCC-eEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCc
Q 015867           50 DDREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQ-ERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSS  128 (399)
Q Consensus        50 ~~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~-~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~  128 (399)
                      ++..+.+.+..++.+.++|++.+.||+|+||.||+|.+..++ +.||||+++........+..|+.+++.+.+.....+.
T Consensus         3 ~~~~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~   82 (355)
T 2eu9_A            3 DDKEGHLVCRIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKF   82 (355)
T ss_dssp             BCTTSCBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHCTTSCS
T ss_pred             cccCCCcccccCceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccccchhHHHHHHHHHHHHhhcCCCCce
Confidence            355667788889999999999999999999999999998776 7999999987666677788899999999988777777


Q ss_pred             ceeeeceeeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          129 HCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       129 ~iv~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      +++.+++++...+..++||||++++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||+..++..
T Consensus        83 ~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~  162 (355)
T 2eu9_A           83 LCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFE  162 (355)
T ss_dssp             CBCCEEEEEEETTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEE
T ss_pred             eEEEeeeeeeeCCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeccccc
Confidence            89999999999999999999998899998887765579999999999999999999999999999999999999544321


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                      .+....     .......+.++.+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..
T Consensus       163 ~~~~~~-----~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~  237 (355)
T 2eu9_A          163 TLYNEH-----KSCEEKSVKNTSIRVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFT  237 (355)
T ss_dssp             EEECCC------CCCEEEESCCCEEECCCTTCEETTSCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             cccccc-----ccccccccCCCcEEEeecCccccccccccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCC
Confidence            111000     000001135788999999999877766677889999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||...+..+.+..+....+++|..+.........  + ......|+..............  .. ..........+.++.
T Consensus       238 pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~l~  311 (355)
T 2eu9_A          238 LFQTHENREHLVMMEKILGPIPSHMIHRTRKQKY--F-YKGGLVWDENSSDGRYVKENCK--PL-KSYMLQDSLEHVQLF  311 (355)
T ss_dssp             SCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGG--E-ETTEECCCTTSHHHHHHHHHCC--CG-GGGCSCCSHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhh--h-cccccccccccchhccccccCC--cc-cccccccchhHHHHH
Confidence            9999999999999999999999998877643322  1 1223455553322222111110  00 011122345577899


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||.+||+.||.+|||+.|+|+||||++++
T Consensus       312 ~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  341 (355)
T 2eu9_A          312 DLMRRMLEFDPAQRITLAEALLHPFFAGLT  341 (355)
T ss_dssp             HHHHHHTCSSTTTSCCHHHHTTSGGGGGCC
T ss_pred             HHHHHHhcCChhhCcCHHHHhcChhhcCCC
Confidence            999999999999999999999999999874

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=3.4e-53  Score=402.12  Aligned_cols=253  Identities=23%  Similarity=0.431  Sum_probs=216.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++++.||+|+||.||+|++..+++.||||++++..    ........|..+++.+.     .||||+++++++.+.
T Consensus        22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~-----~hp~Iv~l~~~~~~~   96 (353)
T 3txo_A           22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLAR-----NHPFLTQLFCCFQTP   96 (353)
T ss_dssp             -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTT-----TCTTBCCEEEEEECS
T ss_pred             hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhcc-----CCCceeeEEEEEEeC
Confidence            467999999999999999999999999999999997532    23344667788887764     479999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+|+||||+ |++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+                 
T Consensus        97 ~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl-----------------  157 (353)
T 3txo_A           97 DRLFFVMEFVNGGDLMFHIQKSR--RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL-----------------  157 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE-----------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEE-----------------
Confidence            9999999999 899999998866  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             +.++.+||+|||++....   ....+.+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       158 -------~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~  230 (353)
T 3txo_A          158 -------DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED  230 (353)
T ss_dssp             -------CTTSCEEECCCTTCBCSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -------CCCCCEEEccccceeecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH
Confidence                   456789999999987522   2345678999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....|......+|                                                  ..++.++.+||.+||+
T Consensus       231 ~~~~~i~~~~~~~p--------------------------------------------------~~~~~~~~~li~~lL~  260 (353)
T 3txo_A          231 DLFEAILNDEVVYP--------------------------------------------------TWLHEDATGILKSFMT  260 (353)
T ss_dssp             HHHHHHHHCCCCCC--------------------------------------------------TTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCCCC--------------------------------------------------CCCCHHHHHHHHHHhh
Confidence            88777765433222                                                  2457788999999999


Q ss_pred             cCCCCCCCH------HHHhCCccccCCC
Q 015867          377 YDPSERLTA------RQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t~------~ell~hp~f~~~~  398 (399)
                      .||.+||++      +|+++||||++++
T Consensus       261 ~dP~~R~~~~~~~~~~~il~hp~f~~~~  288 (353)
T 3txo_A          261 KNPTMRLGSLTQGGEHAILRHPFFKEID  288 (353)
T ss_dssp             SSGGGSTTSGGGTCTHHHHTSGGGTTCC
T ss_pred             hCHHHccCCcccCCHHHHhhCCcccCCC
Confidence            999999998      8999999999874

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=2.1e-52  Score=401.54  Aligned_cols=321  Identities=35%  Similarity=0.654  Sum_probs=253.5

Q ss_pred             ceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           55 HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        55 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      .+.+..++.+.++|++.+.||+|+||+||+|.+..+++.||||+++...........|+.+++.+.+.....+++++.++
T Consensus        43 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  122 (382)
T 2vx3_A           43 DYIVKNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLK  122 (382)
T ss_dssp             CBCCCTTCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEE
T ss_pred             cEEeecCCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccHHHHHHHHHHHHHHHHHHhcccccceeEEEee
Confidence            35667788889999999999999999999999999999999999987655567778899999999887777777899999


Q ss_pred             eeeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--HCCccccCCCCCcEEEeecccccCCC
Q 015867          135 NWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH--DLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH--~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      +++...+..|+||||++++|.+++.......+++..++.++.||+.||.|||  +.|||||||||+|||+..        
T Consensus       123 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~--------  194 (382)
T 2vx3_A          123 RHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCN--------  194 (382)
T ss_dssp             EEEEETTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESS--------
T ss_pred             eeeccCCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEec--------
Confidence            9999999999999999889999998876557999999999999999999999  579999999999999953        


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                    +.++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus       195 --------------~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~  260 (382)
T 2vx3_A          195 --------------PKRSAIKIVDFGSSCQLGQRIYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSG  260 (382)
T ss_dssp             --------------TTSCCEEECCCTTCEETTCCCCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             --------------CCCCcEEEEeccCceecccccccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence                          236779999999998877666778899999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCc----------cchHHHHHHHhh----h-hhhhhhh
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGA----------VSRESIKAVKKL----D-RLKNMVS  357 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~----------~~~~~~~~~~~~----~-~~~~~~~  357 (399)
                      .+..+.+..+....+.+|..++...... ..++.......|....          .....+......    + .......
T Consensus       261 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  339 (382)
T 2vx3_A          261 ANEVDQMNKIVEVLGIPPAHILDQAPKA-RKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGES  339 (382)
T ss_dssp             SSHHHHHHHHHHHHCSCCHHHHTTCTTH-HHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCT
T ss_pred             CCHHHHHHHHHHHhCCCCHHHHHhhHHH-HHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccc
Confidence            9999999999999999988876543321 1111111111111000          000000000000    0 0000001


Q ss_pred             ccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       358 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ......+.++.+||.+||+.||.+|||++|+|+||||++..
T Consensus       340 ~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          340 GHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             TCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred             cccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence            11122345789999999999999999999999999999863

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=1.2e-52  Score=399.27  Aligned_cols=263  Identities=27%  Similarity=0.488  Sum_probs=225.3

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-------hhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+|+.||+|++.....       ....+..|+.+++.+.      ||||++++
T Consensus         8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~------hpnIv~l~   81 (361)
T 2yab_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL------HPNIITLH   81 (361)
T ss_dssp             SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCC------CTTBCCEE
T ss_pred             CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCC------CcCCCcEE
Confidence            4567789999999999999999999999999999999975332       2355677888887764      69999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      +++.+.+..|+||||+ |++|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||+..++       
T Consensus        82 ~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~-------  152 (361)
T 2yab_A           82 DVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN-------  152 (361)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHTTCS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT-------
T ss_pred             EEEEeCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCC-------
Confidence            9999999999999999 999999997765  699999999999999999999999999999999999995432       


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                   .....+||+|||++.....  .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       153 -------------~~~~~vkl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~  219 (361)
T 2yab_A          153 -------------IPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  219 (361)
T ss_dssp             -------------SSSCCEEECCCSSCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             -------------CCccCEEEEecCCceEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCC
Confidence                         1233799999999876433  3356789999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+....|......++...                                              ++.++.++.+||
T Consensus       220 ~~~~~~~~~~i~~~~~~~~~~~----------------------------------------------~~~~s~~~~~li  253 (361)
T 2yab_A          220 GDTKQETLANITAVSYDFDEEF----------------------------------------------FSQTSELAKDFI  253 (361)
T ss_dssp             CSSHHHHHHHHHTTCCCCCHHH----------------------------------------------HTTSCHHHHHHH
T ss_pred             CCCHHHHHHHHHhcCCCCCchh----------------------------------------------ccCCCHHHHHHH
Confidence            9888887777766544444322                                              235678899999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccCCC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .+||..||.+|||+.|+++||||+.++
T Consensus       254 ~~~L~~dP~~R~t~~e~l~hp~~~~~~  280 (361)
T 2yab_A          254 RKLLVKETRKRLTIQEALRHPWITPVD  280 (361)
T ss_dssp             HHHSCSSTTTSCCHHHHHTSTTTSCSS
T ss_pred             HHHCCCChhHCcCHHHHhcCcCcCCCc
Confidence            999999999999999999999999764

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=6.3e-52  Score=399.66  Aligned_cols=335  Identities=30%  Similarity=0.562  Sum_probs=253.8

Q ss_pred             CCceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcC--CCCCcce
Q 015867           53 EGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKND--KGGSSHC  130 (399)
Q Consensus        53 ~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~--~~~~~~i  130 (399)
                      .+...+..++.+.++|++.+.||+|+||+||+|++..+++.||||+++........+..|+.+++.+.+..  ..+|+||
T Consensus        24 ~~~~~~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~i  103 (397)
T 1wak_A           24 GGYHLVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMV  103 (397)
T ss_dssp             --CCSSCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGB
T ss_pred             CCceEEehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCccee
Confidence            45667888899999999999999999999999999999999999999876666677889999999998644  2347899


Q ss_pred             eeeceeec----cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeec
Q 015867          131 VQIRNWFD----YRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSS  205 (399)
Q Consensus       131 v~~~~~~~----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~  205 (399)
                      +++++++.    .....|+||||++++|.+.+.......+++..++.++.||+.||+|||++ ||+||||||+|||++.+
T Consensus       104 v~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~  183 (397)
T 1wak_A          104 VQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVN  183 (397)
T ss_dssp             CCEEEEEEEEETTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCC
T ss_pred             eeeecceeecCCCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEecc
Confidence            99999887    56689999999988998888776555799999999999999999999999 99999999999999766


Q ss_pred             ccccC------CCCcCC---------------CCCC----CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchh
Q 015867          206 EFIKL------PGYKRS---------------SSGE----MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPE  260 (399)
Q Consensus       206 ~~~~~------~~~~~~---------------~~~~----~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE  260 (399)
                      +....      ..+...               ..+.    ...........+||+|||++..........+||+.|+|||
T Consensus       184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y~aPE  263 (397)
T 1wak_A          184 EQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLE  263 (397)
T ss_dssp             HHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGGCCHH
T ss_pred             chhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcccCCh
Confidence            42100      000000               0000    0000011234799999999987766667778999999999


Q ss_pred             hhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC------cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCccc-CC
Q 015867          261 VILGLGWSYPCDMWSVGCILVELCTGEALFQTHE------NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRL-NW  333 (399)
Q Consensus       261 ~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~  333 (399)
                      ++.+..++.++|||||||++|+|++|..||...+      ..+.+..+....+.+|..++........ ++...... .+
T Consensus       264 ~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~~~~~  342 (397)
T 1wak_A          264 VLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKE-FFTKKGDLKHI  342 (397)
T ss_dssp             HHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGG-TBCTTSSBSSC
T ss_pred             hhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhccccccc-ccCCccccccc
Confidence            9999999999999999999999999999998654      5677888889999999887765433222 22222111 11


Q ss_pred             CCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          334 PEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       334 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      .. ...........       .........+..+.+||.+||+.||.+|||++|+|+||||++
T Consensus       343 ~~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          343 TK-LKPWGLFEVLV-------EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             CC-CCCCCHHHHHH-------HTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             cc-cCCcchhHhhh-------hhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence            11 00000000000       011234567888999999999999999999999999999975

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=2.2e-52  Score=389.57  Aligned_cols=289  Identities=28%  Similarity=0.488  Sum_probs=227.5

Q ss_pred             cCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch------hhhHHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        60 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      .+..+.++|++.+.||+|+||+||+|++..+++.||||++....      ........|+.+++.+...   .||||+++
T Consensus         3 ~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~---~h~niv~~   79 (308)
T 3g33_A            3 LGSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF---EHPNVVRL   79 (308)
T ss_dssp             -------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHH---CCTTBCCE
T ss_pred             CCcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhc---CCCCeEEe
Confidence            35667789999999999999999999999999999999986432      1234566788888887643   46999999


Q ss_pred             ceeeccCC-----eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          134 RNWFDYRN-----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       134 ~~~~~~~~-----~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      ++++....     ..++||||++++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||+      
T Consensus        80 ~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~------  153 (308)
T 3g33_A           80 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILV------  153 (308)
T ss_dssp             EEEEEECCSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEE------
T ss_pred             eeeeeccCCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE------
Confidence            99987654     6899999998899999998776569999999999999999999999999999999999999      


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhC
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG  286 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  286 (399)
                                        +.++.+||+|||++.....  .....+||+.|+|||++.+..++.++|||||||++|+|++|
T Consensus       154 ------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g  215 (308)
T 3g33_A          154 ------------------TSGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRR  215 (308)
T ss_dssp             ------------------CTTSCEEECSCSCTTTSTTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTS
T ss_pred             ------------------cCCCCEEEeeCccccccCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhC
Confidence                              4467799999999876433  33567899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       287 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      .+||.+.+..+....+....+.++...+.........        .++.               ..........+.++.+
T Consensus       216 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~---------------~~~~~~~~~~~~~~~~  272 (308)
T 3g33_A          216 KPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRG--------AFPP---------------RGPRPVQSVVPEMEES  272 (308)
T ss_dssp             SCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGG--------GSCC---------------CCCCCHHHHSCSCCHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCCChhhccchhhcccc--------ccCC---------------CCCCcHHHhCccccHH
Confidence            9999999999999999888877665432211111000        0000               0001111223567889


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +.+||.+||+.||.+|||+.|+|+||||++.+
T Consensus       273 ~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          273 GAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             HHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence            99999999999999999999999999999754

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=3.5e-52  Score=391.46  Aligned_cols=253  Identities=25%  Similarity=0.390  Sum_probs=218.7

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++....   .....+..|+++++.+.      ||||+++++++..
T Consensus        12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~l~~~~~~   85 (328)
T 3fe3_A           12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN------HPNIVKLFEVIET   85 (328)
T ss_dssp             CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCC------CTTBCCEEEEEEC
T ss_pred             CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEEEE
Confidence            34568999999999999999999999999999999997532   23345667888888875      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..|+||||+ +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||+                
T Consensus        86 ~~~~~lv~e~~~~~~L~~~l~~~~--~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll----------------  147 (328)
T 3fe3_A           86 EKTLYLIMEYASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL----------------  147 (328)
T ss_dssp             SSEEEEEECCCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----------------
T ss_pred             CCEEEEEEECCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEE----------------
Confidence            99999999999 999999998766  59999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCCCCC-CcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLGWS-YPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                              +.++.+||+|||++....  ......+||+.|+|||++.+..++ .++|||||||++|+|++|..||.+.+.
T Consensus       148 --------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  219 (328)
T 3fe3_A          148 --------DADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL  219 (328)
T ss_dssp             --------CTTSCEEECSTTCCGGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             --------cCCCCEEEeeccCceecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH
Confidence                    456789999999986533  234567899999999999988775 799999999999999999999999887


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+....+.......|                                                  ..++.++.+||.+||
T Consensus       220 ~~~~~~i~~~~~~~p--------------------------------------------------~~~s~~~~~li~~~L  249 (328)
T 3fe3_A          220 KELRERVLRGKYRIP--------------------------------------------------FYMSTDCENLLKRFL  249 (328)
T ss_dssp             HHHHHHHHHCCCCCC--------------------------------------------------TTSCHHHHHHHHHHC
T ss_pred             HHHHHHHHhCCCCCC--------------------------------------------------CCCCHHHHHHHHHHC
Confidence            777766654322222                                                  235778899999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCC
Q 015867          376 RYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +.||.+|||++|+++||||+..
T Consensus       250 ~~dP~~R~t~~eil~h~~~~~~  271 (328)
T 3fe3_A          250 VLNPIKRGTLEQIMKDRWINAG  271 (328)
T ss_dssp             CSSTTTSCCHHHHTTCTTTTTT
T ss_pred             CCChhHCcCHHHHhcCHhhcCC
Confidence            9999999999999999999875

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=4.9e-52  Score=391.63  Aligned_cols=251  Identities=26%  Similarity=0.477  Sum_probs=216.8

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++++.||+|+||.||+|++..+|+.||||++++..    ........|..+++.+      .||||+++++++.+.+
T Consensus         5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~l~~~~~~~~   78 (337)
T 1o6l_A            5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT------RHPFLTALKYAFQTHD   78 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC------CCTTBCCEEEEEECSS
T ss_pred             HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhC------CCCcCcceEEEEEeCC
Confidence            57999999999999999999999999999999997532    2234566677777765      4699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||+ |++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+                  
T Consensus        79 ~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll------------------  138 (337)
T 1o6l_A           79 RLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML------------------  138 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE------------------
T ss_pred             EEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEE------------------
Confidence            999999999 899999998766  59999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                            +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       139 ------~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  212 (337)
T 1o6l_A          139 ------DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER  212 (337)
T ss_dssp             ------CTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ------CCCCCEEEeeccchhhcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHH
Confidence                  45678999999998752   223456789999999999999999999999999999999999999999887766


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+......+                                                  +..++.++.+||.+||+.
T Consensus       213 ~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~lL~~  242 (337)
T 1o6l_A          213 LFELILMEEIRF--------------------------------------------------PRTLSPEAKSLLAGLLKK  242 (337)
T ss_dssp             HHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHcCCCCC--------------------------------------------------CCCCCHHHHHHHHHHhhc
Confidence            666554422111                                                  234678889999999999


Q ss_pred             CCCCCC-----CHHHHhCCccccCCC
Q 015867          378 DPSERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       378 dP~~R~-----t~~ell~hp~f~~~~  398 (399)
                      ||.+||     +++|+++||||++++
T Consensus       243 dP~~R~g~~~~~~~ei~~h~~f~~~~  268 (337)
T 1o6l_A          243 DPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             STTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             CHHHhcCCCCCCHHHHHcCCCcCCCC
Confidence            999999     899999999999874

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=2.7e-52  Score=389.69  Aligned_cols=288  Identities=31%  Similarity=0.464  Sum_probs=228.0

Q ss_pred             cCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        60 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      .++.+.++|++++.||+|+||+||+|.+. +++.||||++....   .....+..|+++++.+.      ||||++++++
T Consensus        15 ~~q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~   87 (311)
T 3niz_A           15 YFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELH------HPNIVSLIDV   87 (311)
T ss_dssp             CEECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCC------CTTBCCEEEE
T ss_pred             eecchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcC------CCCEeeeeeE
Confidence            34667889999999999999999999985 58899999986432   22355677888888885      5999999999


Q ss_pred             eccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          137 FDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       137 ~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      +.+.+..++||||+.++|.+++..... .+++..++.++.||+.||+|||++||+||||||+|||+              
T Consensus        88 ~~~~~~~~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~--------------  152 (311)
T 3niz_A           88 IHSERCLTLVFEFMEKDLKKVLDENKT-GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLI--------------  152 (311)
T ss_dssp             ECCSSCEEEEEECCSEEHHHHHHTCTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE--------------
T ss_pred             EccCCEEEEEEcCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEE--------------
Confidence            999999999999997799998876543 59999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                +.++.+||+|||++.....   ......||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+
T Consensus       153 ----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~  222 (311)
T 3niz_A          153 ----------NSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPG  222 (311)
T ss_dssp             ----------CTTCCEEECCCTTCEETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ----------CCCCCEEEccCcCceecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCC
Confidence                      4467799999999876432   2345578999999999987 5689999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+.+..+....+.++...+......... ....    ...               ..........+.++.++.+||.
T Consensus       223 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~---------------~~~~~~~~~~~~~~~~~~~li~  282 (311)
T 3niz_A          223 VTDDDQLPKIFSILGTPNPREWPQVQELPLW-KQRT----FQV---------------FEKKPWSSIIPGFCQEGIDLLS  282 (311)
T ss_dssp             SSTTTHHHHHHHHHCCCCTTTSGGGTTSHHH-HSCC----CCC---------------CCCCCHHHHSTTCCHHHHHHHH
T ss_pred             CChHHHHHHHHHHHCCCChHHhhhhhccchh-hhcc----ccc---------------ccCCcHHHhCcccCHHHHHHHH
Confidence            8888888888888777654433222111000 0000    000               0000011223457788999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCCCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNLNE  399 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~~e  399 (399)
                      +||+.||.+|||++|+|+||||++++.
T Consensus       283 ~~L~~dP~~Rpt~~ell~hp~f~~~~~  309 (311)
T 3niz_A          283 NMLCFDPNKRISARDAMNHPYFKDLDP  309 (311)
T ss_dssp             HHSCSCTTTSCCHHHHHTSGGGTTSCT
T ss_pred             HHcCCChhHCCCHHHHhcCcccccCCc
Confidence            999999999999999999999999863

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=4.7e-52  Score=388.91  Aligned_cols=251  Identities=27%  Similarity=0.450  Sum_probs=220.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|++..+|+.||+|+++...    ........|..+++.+      .||||+++++++.+.+
T Consensus         6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~Iv~~~~~~~~~~   79 (318)
T 1fot_A            6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV------THPFIIRMWGTFQDAQ   79 (318)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSC------CBTTBCCEEEEEECSS
T ss_pred             HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhC------CCCCCceEeEEEEeCC
Confidence            57999999999999999999999999999999997532    2234455677777765      4699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||+ |++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+                  
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll------------------  139 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL------------------  139 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE------------------
T ss_pred             EEEEEEeCCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEE------------------
Confidence            999999999 899999998865  59999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                            +.++.+||+|||++........+.+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+...
T Consensus       140 ------~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~  213 (318)
T 1fot_A          140 ------DKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE  213 (318)
T ss_dssp             ------CTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred             ------cCCCCEEEeecCcceecCCccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHH
Confidence                  45678999999999877666677899999999999999999999999999999999999999999888777776


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .|......+                                                  ++.++.++.+||.+||+.||.
T Consensus       214 ~i~~~~~~~--------------------------------------------------p~~~~~~~~~li~~lL~~dp~  243 (318)
T 1fot_A          214 KILNAELRF--------------------------------------------------PPFFNEDVKDLLSRLITRDLS  243 (318)
T ss_dssp             HHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCSCTT
T ss_pred             HHHhCCCCC--------------------------------------------------CCCCCHHHHHHHHHHhccCHH
Confidence            665432221                                                  134577889999999999999


Q ss_pred             CCC-----CHHHHhCCccccCCC
Q 015867          381 ERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       381 ~R~-----t~~ell~hp~f~~~~  398 (399)
                      +||     +++|+++||||++++
T Consensus       244 ~R~~~~~~~~~~i~~hp~f~~~~  266 (318)
T 1fot_A          244 QRLGNLQNGTEDVKNHPWFKEVV  266 (318)
T ss_dssp             TCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             HcCCCcCCCHHHHhcCccccCCC
Confidence            999     899999999999864

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=3.7e-52  Score=393.58  Aligned_cols=253  Identities=25%  Similarity=0.422  Sum_probs=219.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++.+.||+|+||.||+|++..+++.||||+++...    ........|..++..+.     .||||+++++++.+.
T Consensus        16 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~-----~hp~iv~l~~~~~~~   90 (345)
T 1xjd_A           16 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW-----EHPFLTHMFCTFQTK   90 (345)
T ss_dssp             CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHT-----TCTTBCCEEEEEECS
T ss_pred             hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcC-----CCCCCCcEEEEEEeC
Confidence            467999999999999999999999999999999997532    23345667888887663     479999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+|+||||+ |++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+                 
T Consensus        91 ~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll-----------------  151 (345)
T 1xjd_A           91 ENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL-----------------  151 (345)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE-----------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEE-----------------
Confidence            9999999999 999999998765  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       152 -------~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  224 (345)
T 1xjd_A          152 -------DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEE  224 (345)
T ss_dssp             -------CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -------CCCCCEEEeEChhhhhcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHH
Confidence                   45678999999998753   23345678999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....|......+                                                  +..++.++.+||.+||+
T Consensus       225 ~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~li~~lL~  254 (345)
T 1xjd_A          225 ELFHSIRMDNPFY--------------------------------------------------PRWLEKEAKDLLVKLFV  254 (345)
T ss_dssp             HHHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHSC
T ss_pred             HHHHHHHhCCCCC--------------------------------------------------CcccCHHHHHHHHHHhc
Confidence            7776664432211                                                  12457788999999999


Q ss_pred             cCCCCCCCHH-HHhCCccccCCC
Q 015867          377 YDPSERLTAR-QALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t~~-ell~hp~f~~~~  398 (399)
                      .||.+|||+. ++++||||++++
T Consensus       255 ~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          255 REPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             SSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             CCHhHcCCChHHHHcCccccCCC
Confidence            9999999998 999999999875

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-52  Score=396.72  Aligned_cols=283  Identities=30%  Similarity=0.542  Sum_probs=229.9

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|++++.||+|+||.||+|.+..+|+.||||++...   ......+..|+++++.+.      |+||+++++++..
T Consensus        22 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~l~~~~~~   95 (367)
T 1cm8_A           22 EVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR------HENVIGLLDVFTP   95 (367)
T ss_dssp             CCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC------BTTBCCCSEEECS
T ss_pred             eecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCC------CcCCCCceeeEec
Confidence            3467899999999999999999999999999999998542   223455677888888875      5999999999876


Q ss_pred             CC------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 RN------HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ~~------~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      .+      .+|+||||++++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||+           
T Consensus        96 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll-----------  161 (367)
T 1cm8_A           96 DETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV-----------  161 (367)
T ss_dssp             CSSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE-----------
T ss_pred             CCccccCceEEEEEecCCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEE-----------
Confidence            53      46999999999999999874   49999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                   +.++.+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+
T Consensus       162 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~  228 (367)
T 1cm8_A          162 -------------NEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKG  228 (367)
T ss_dssp             -------------CTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -------------cCCCCEEEEeeecccccccccCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCC
Confidence                         45678999999999877666677889999999999987 6899999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhh-hhhhhccchhhhhHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL-KNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li  371 (399)
                      .+..+.+..|....+.++..++..........+.                    ...... ........+.+++++.+||
T Consensus       229 ~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~ll  288 (367)
T 1cm8_A          229 SDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYM--------------------KGLPELEKKDFASILTNASPLAVNLL  288 (367)
T ss_dssp             SSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHH--------------------HHSCCCCCCCGGGTCTTCCHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHH--------------------HhCCCCCCCCHHHHCCCCCHHHHHHH
Confidence            9999999999999999998877655322111110                    000000 0011123356788999999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccCCC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .+||+.||.+|||++|+|+||||+++.
T Consensus       289 ~~mL~~dP~~R~t~~e~l~hp~f~~~~  315 (367)
T 1cm8_A          289 EKMLVLDAEQRVTAGEALAHPYFESLH  315 (367)
T ss_dssp             HHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             HHHccCChhHCCCHHHHhcChHHHhhc
Confidence            999999999999999999999999863

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=6.2e-52  Score=388.85  Aligned_cols=260  Identities=24%  Similarity=0.409  Sum_probs=225.8

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++.........+..|+.+++.+.      ||||+++++++.+.+.
T Consensus         2 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~~~~~~~~~~~   75 (321)
T 1tki_A            2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR------HRNILHLHESFESMEE   75 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSC------CTTBCCEEEEEEETTE
T ss_pred             chhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCcccHHHHHHHHHHHHhCC------CCCCCeEeEEEecCCE
Confidence            3567899999999999999999999999999999999765555566778999998875      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ |++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||++.+                
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~----------------  138 (321)
T 1tki_A           76 LVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR----------------  138 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS----------------
T ss_pred             EEEEEEeCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC----------------
Confidence            99999999 8899999976532 59999999999999999999999999999999999999531                


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                            .++.+||+|||++......  .....||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+..
T Consensus       139 ------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~  212 (321)
T 1tki_A          139 ------RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII  212 (321)
T ss_dssp             ------SCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred             ------CCCCEEEEECCCCeECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHH
Confidence                  2678999999998764333  24567999999999999988999999999999999999999999998888877


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......++...                                              ++.++.++.+||.+||..||
T Consensus       213 ~~i~~~~~~~~~~~----------------------------------------------~~~~s~~~~~li~~~L~~dp  246 (321)
T 1tki_A          213 ENIMNAEYTFDEEA----------------------------------------------FKEISIEAMDFVDRLLVKER  246 (321)
T ss_dssp             HHHHHTCCCCCHHH----------------------------------------------HTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHcCCCCCChhh----------------------------------------------hccCCHHHHHHHHHHcCCCh
Confidence            77766554444321                                              13567889999999999999


Q ss_pred             CCCCCHHHHhCCccccCC
Q 015867          380 SERLTARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~  397 (399)
                      .+|||+.|+|+||||++.
T Consensus       247 ~~Rpt~~e~l~hp~~~~~  264 (321)
T 1tki_A          247 KSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             GGSCCHHHHHHSHHHHSC
T ss_pred             hHCcCHHHHhcChhhccC
Confidence            999999999999999863

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.5e-51  Score=395.68  Aligned_cols=253  Identities=24%  Similarity=0.446  Sum_probs=212.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++++.||+|+||.||+|++..+++.||||++++...    .......|..++..+.     .||||+++++++.+.
T Consensus        51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~-----~hp~Iv~l~~~~~~~  125 (396)
T 4dc2_A           51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTE  125 (396)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHT-----TCTTBCCEEEEEECS
T ss_pred             hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcC-----CCCCcCeeEEEEEEC
Confidence            3579999999999999999999999999999999975422    2234667888887764     479999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+|+||||+ |++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+                 
T Consensus       126 ~~~~lV~E~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl-----------------  186 (396)
T 4dc2_A          126 SRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL-----------------  186 (396)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE-----------------
T ss_pred             CEEEEEEEcCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE-----------------
Confidence            9999999999 999999998766  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCccc---CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAF---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             +.++.+||+|||++..   ......+.+||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus       187 -------~~~g~ikL~DFGla~~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~  259 (396)
T 4dc2_A          187 -------DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS  259 (396)
T ss_dssp             -------CTTSCEEECCCTTCBCCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC-
T ss_pred             -------CCCCCEEEeecceeeecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccc
Confidence                   4567899999999875   233446778999999999999999999999999999999999999999653321


Q ss_pred             H---------HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHH
Q 015867          297 E---------HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL  367 (399)
Q Consensus       297 ~---------~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (399)
                      +         ....+...                                                  ....+..++.++
T Consensus       260 ~~~~~~~~~~~~~~i~~~--------------------------------------------------~~~~p~~~s~~~  289 (396)
T 4dc2_A          260 DNPDQNTEDYLFQVILEK--------------------------------------------------QIRIPRSLSVKA  289 (396)
T ss_dssp             -----CCHHHHHHHHHHC--------------------------------------------------CCCCCTTSCHHH
T ss_pred             cccchhhHHHHHHHHhcc--------------------------------------------------ccCCCCcCCHHH
Confidence            1         11111111                                                  112234578889


Q ss_pred             HHHHHHccccCCCCCCCH------HHHhCCccccCCC
Q 015867          368 TDLLHGLLRYDPSERLTA------RQALNHPFFRNLN  398 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~------~ell~hp~f~~~~  398 (399)
                      .+||.+||+.||.+||++      +|+++||||++++
T Consensus       290 ~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i~  326 (396)
T 4dc2_A          290 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  326 (396)
T ss_dssp             HHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTCC
T ss_pred             HHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCCC
Confidence            999999999999999985      7999999999874

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.1e-51  Score=391.49  Aligned_cols=253  Identities=23%  Similarity=0.401  Sum_probs=217.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++++.||+|+||.||+|++..+++.||||+++...    ........|..++..+.     .||+|+++++++.+.
T Consensus        19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~hp~iv~l~~~~~~~   93 (353)
T 2i0e_A           19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-----KPPFLTQLHSCFQTM   93 (353)
T ss_dssp             CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTT-----CCTTBCCEEEEEECS
T ss_pred             hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcC-----CCCEEeeEEEEEEcC
Confidence            467999999999999999999999999999999997532    22334555666665543     579999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+|+||||+ |++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||+                 
T Consensus        94 ~~~~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll-----------------  154 (353)
T 2i0e_A           94 DRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML-----------------  154 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE-----------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEE-----------------
Confidence            9999999999 999999998766  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..
T Consensus       155 -------~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~  227 (353)
T 2i0e_A          155 -------DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED  227 (353)
T ss_dssp             -------CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -------cCCCcEEEEeCCcccccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH
Confidence                   45678999999998752   23345678999999999999999999999999999999999999999988887


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....|......+|                                                  ..++.++.+||.+||+
T Consensus       228 ~~~~~i~~~~~~~p--------------------------------------------------~~~s~~~~~li~~lL~  257 (353)
T 2i0e_A          228 ELFQSIMEHNVAYP--------------------------------------------------KSMSKEAVAICKGLMT  257 (353)
T ss_dssp             HHHHHHHHCCCCCC--------------------------------------------------TTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHhCCCCCC--------------------------------------------------CCCCHHHHHHHHHHhh
Confidence            77777655322222                                                  3467888999999999


Q ss_pred             cCCCCCCC-----HHHHhCCccccCCC
Q 015867          377 YDPSERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t-----~~ell~hp~f~~~~  398 (399)
                      .||.+||+     ++++++||||++++
T Consensus       258 ~dP~~R~~~~~~~~~~i~~h~~f~~~~  284 (353)
T 2i0e_A          258 KHPGKRLGCGPEGERDIKEHAFFRYID  284 (353)
T ss_dssp             SCTTSCTTCSTTHHHHHHTSGGGTTCC
T ss_pred             cCHHHcCCCCCCCHHHHhcCccccCCC
Confidence            99999994     79999999999874

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=1.1e-51  Score=391.33  Aligned_cols=252  Identities=26%  Similarity=0.462  Sum_probs=220.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++++.||+|+||.||+|++..+|+.||||++....    .....+..|..+++.+      .||||+++++++.+.
T Consensus        40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~~~~~~~~~  113 (350)
T 1rdq_E           40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPFLVKLEFSFKDN  113 (350)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC------CCTTBCCEEEEEECS
T ss_pred             HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhC------CCCCCCeEEEEEEcC
Confidence            467999999999999999999999999999999997532    2234455666666655      569999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+|+||||+ |++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+                 
T Consensus       114 ~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll-----------------  174 (350)
T 1rdq_E          114 SNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI-----------------  174 (350)
T ss_dssp             SEEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE-----------------
T ss_pred             CEEEEEEcCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEE-----------------
Confidence            9999999999 999999998866  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                             +.++.+||+|||++..........+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+..
T Consensus       175 -------~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  247 (350)
T 1rdq_E          175 -------DQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY  247 (350)
T ss_dssp             -------CTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             -------CCCCCEEEcccccceeccCCcccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHH
Confidence                   4567899999999987766667789999999999999999999999999999999999999999988877777


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..|......+|                                                  ..++.++.+||.+||+.||
T Consensus       248 ~~i~~~~~~~p--------------------------------------------------~~~~~~~~~li~~lL~~dp  277 (350)
T 1rdq_E          248 EKIVSGKVRFP--------------------------------------------------SHFSSDLKDLLRNLLQVDL  277 (350)
T ss_dssp             HHHHHCCCCCC--------------------------------------------------TTCCHHHHHHHHHHSCSCT
T ss_pred             HHHHcCCCCCC--------------------------------------------------CCCCHHHHHHHHHHhhcCH
Confidence            76655322221                                                  3457788999999999999


Q ss_pred             CCCCC-----HHHHhCCccccCCC
Q 015867          380 SERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       380 ~~R~t-----~~ell~hp~f~~~~  398 (399)
                      .+||+     ++|+++||||++++
T Consensus       278 ~~R~~~~~~~~~ei~~h~~f~~~~  301 (350)
T 1rdq_E          278 TKRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             TTCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             HhccCCccCCHHHHHhCcCcCCCC
Confidence            99998     99999999999864

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=1.8e-51  Score=404.03  Aligned_cols=302  Identities=26%  Similarity=0.452  Sum_probs=229.7

Q ss_pred             CceeeccCC---ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCC
Q 015867           54 GHYVFNLGE---NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGS  127 (399)
Q Consensus        54 ~~~~~~~~~---~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~  127 (399)
                      ..+.+..++   .+.++|++++.||+|+||+||+|++..+++.||||++...   ......+..|+.+++.+.      |
T Consensus        47 ~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h  120 (464)
T 3ttj_A           47 QFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------H  120 (464)
T ss_dssp             CEEEEEC--CEEEEETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCC------C
T ss_pred             cceeeecCCcceeecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCC------C
Confidence            345555555   3468999999999999999999999999999999999753   233455667888888774      5


Q ss_pred             cceeeeceeeccC------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEE
Q 015867          128 SHCVQIRNWFDYR------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENIL  201 (399)
Q Consensus       128 ~~iv~~~~~~~~~------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIl  201 (399)
                      +||+++++++...      ...|+||||++++|.+.+..    .+++..++.++.||+.||+|||++||+||||||+|||
T Consensus       121 pnIv~l~~~~~~~~~~~~~~~~~lv~E~~~~~l~~~~~~----~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIl  196 (464)
T 3ttj_A          121 KNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIV  196 (464)
T ss_dssp             TTBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEE
T ss_pred             CCCCcEEEEEccCCccccCCeEEEEEeCCCCCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEE
Confidence            9999999998654      46799999997788888753    4899999999999999999999999999999999999


Q ss_pred             EeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHH
Q 015867          202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  279 (399)
Q Consensus       202 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  279 (399)
                      +                        +.++.+||+|||++......  ....+||+.|+|||++.+..|+.++|||||||+
T Consensus       197 l------------------------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  252 (464)
T 3ttj_A          197 V------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCI  252 (464)
T ss_dssp             E------------------------CTTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHH
T ss_pred             E------------------------eCCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHH
Confidence            9                        45678999999998764432  356789999999999999999999999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhcc
Q 015867          280 LVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH  359 (399)
Q Consensus       280 l~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  359 (399)
                      +|+|++|++||.+.+..+++..|.+..+.++..++.........+......  +....     .... ............
T Consensus       253 l~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~~-~~~~~~~~~~~~  324 (464)
T 3ttj_A          253 MGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK--YAGLT-----FPKL-FPDSLFPADSEH  324 (464)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCC--CCCCC-----HHHH-SCGGGSCCSSHH
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccc--cCCCC-----hHHh-Cccccccccccc
Confidence            999999999999999999999999999998887766554332222221110  00000     0000 000000001111


Q ss_pred             chhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          360 VDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       360 ~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ....+.++.+||.+||+.||.+|||++|+|+||||+..
T Consensus       325 ~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          325 NKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             HHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             ccccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence            22347789999999999999999999999999999864

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1.9e-51  Score=395.67  Aligned_cols=295  Identities=27%  Similarity=0.445  Sum_probs=221.6

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      +..+.++|++++.||+|+||.||+|.+..+++.||||++...   .........|+.+++.+.     +|+||+++++++
T Consensus         4 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~-----~h~niv~l~~~~   78 (388)
T 3oz6_A            4 DRHVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS-----GHENIVNLLNVL   78 (388)
T ss_dssp             CHHHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTT-----TCTTBCCEEEEE
T ss_pred             cCcccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhcc-----CCCCCCeeeeEE
Confidence            344567899999999999999999999999999999998542   233455667888888875     479999999998


Q ss_pred             ccC--CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          138 DYR--NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       138 ~~~--~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      ...  ..+|+||||++++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||+             
T Consensus        79 ~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll-------------  142 (388)
T 3oz6_A           79 RADNDRDVYLVFDYMETDLHAVIRAN---ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILL-------------  142 (388)
T ss_dssp             ECTTSSCEEEEEECCSEEHHHHHHHT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE-------------
T ss_pred             ecCCCCEEEEEecccCcCHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEE-------------
Confidence            754  479999999988999999874   49999999999999999999999999999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCC------------------------CCcccccCCCccchhhhhC-CCCCCc
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ------------------------NHSSIVSTRHYRAPEVILG-LGWSYP  270 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~  270 (399)
                                 +.++.+||+|||++.....                        .....+||+.|+|||++.+ ..++.+
T Consensus       143 -----------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  211 (388)
T 3oz6_A          143 -----------NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKG  211 (388)
T ss_dssp             -----------CTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTH
T ss_pred             -----------cCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCCh
Confidence                       4567899999999864321                        1234689999999999987 579999


Q ss_pred             chhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCc-------ccCCCCCccchHHH
Q 015867          271 CDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGS-------RLNWPEGAVSRESI  343 (399)
Q Consensus       271 ~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~-------~~~~p~~~~~~~~~  343 (399)
                      +|||||||++|+|++|++||.+.+..+.+..|....+.++...+..........+....       ...+..      ..
T Consensus       212 ~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~  285 (388)
T 3oz6_A          212 IDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRD------IF  285 (388)
T ss_dssp             HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCC------CH
T ss_pred             hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHH------hC
Confidence            99999999999999999999999999999999999888887765544222111000000       000000      00


Q ss_pred             HHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       344 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ......    .........++.++.+||.+||+.||.+|||++|+|+||||+..
T Consensus       286 ~~~~~~----~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~  335 (388)
T 3oz6_A          286 TKWKNL----LLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF  335 (388)
T ss_dssp             HHHHHH----HHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred             cchhhh----cccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence            000000    00011223678899999999999999999999999999999875

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=1.2e-51  Score=393.10  Aligned_cols=267  Identities=27%  Similarity=0.441  Sum_probs=224.3

Q ss_pred             ceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCccee
Q 015867           55 HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCV  131 (399)
Q Consensus        55 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv  131 (399)
                      .+.......+.++|++.+.||+|+||.||+|.+..+++.||+|++....   .....+..|+.+++.+.      ||||+
T Consensus        18 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~------hpnIv   91 (362)
T 2bdw_A           18 EFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ------HPNIV   91 (362)
T ss_dssp             ------CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCC------CTTBC
T ss_pred             eEeecCCCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC------CCCCC
Confidence            3445556677789999999999999999999999999999999997532   23355777888888875      59999


Q ss_pred             eeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccC
Q 015867          132 QIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       132 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~  210 (399)
                      ++++++.+.+..|+||||+ |++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++    
T Consensus        92 ~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~----  165 (362)
T 2bdw_A           92 RLHDSIQEESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA----  165 (362)
T ss_dssp             CEEEEEECSSEEEEEECCCCSCBHHHHHTTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSS----
T ss_pred             eEEEEEEeCCEEEEEEecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCC----
Confidence            9999999999999999999 899999998765  599999999999999999999999999999999999996432    


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                                       .+..+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|.+
T Consensus       166 -----------------~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~  228 (362)
T 2bdw_A          166 -----------------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP  228 (362)
T ss_dssp             -----------------TTCCEEECCCTTCBCCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred             -----------------CCCCEEEeecCcceEecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCC
Confidence                             3567999999998764432  345689999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||.+.+..+....+......+|.                                              ..++.++.++.
T Consensus       229 Pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~~~~  262 (362)
T 2bdw_A          229 PFWDEDQHRLYAQIKAGAYDYPS----------------------------------------------PEWDTVTPEAK  262 (362)
T ss_dssp             SSCCSSHHHHHHHHHHTCCCCCT----------------------------------------------TGGGGSCHHHH
T ss_pred             CCCCCCHHHHHHHHHhCCCCCCc----------------------------------------------ccccCCCHHHH
Confidence            99988887777776654333221                                              11245678899


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +||.+||+.||.+|||+.|+|+||||++
T Consensus       263 ~li~~~L~~dP~~R~t~~e~l~hp~~~~  290 (362)
T 2bdw_A          263 SLIDSMLTVNPKKRITADQALKVPWICN  290 (362)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHTTSHHHHT
T ss_pred             HHHHHHcCCChhhCcCHHHHhcCcccCC
Confidence            9999999999999999999999999975

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.7e-51  Score=384.48  Aligned_cols=262  Identities=27%  Similarity=0.501  Sum_probs=224.4

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-------hhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++.....       ....+..|+.+++.+.      ||||++++
T Consensus         7 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~   80 (326)
T 2y0a_A            7 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ------HPNVITLH   80 (326)
T ss_dssp             SCHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCC------CTTBCCEE
T ss_pred             CCcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCC------CCCCCcEE
Confidence            4456789999999999999999999999999999999975321       2456778999998885      59999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      +++.+.+..++||||+ +++|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||++.++       
T Consensus        81 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~-------  151 (326)
T 2y0a_A           81 EVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN-------  151 (326)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHTTSS--CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSS-------
T ss_pred             EEEEeCCEEEEEEEcCCCCCHHHHHHhcC--CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCC-------
Confidence            9999999999999999 999999997655  699999999999999999999999999999999999996533       


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                   .....+||+|||++....  ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       152 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~  218 (326)
T 2y0a_A          152 -------------VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  218 (326)
T ss_dssp             -------------SSSCCEEECCCTTCEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             -------------CCCCCEEEEECCCCeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCC
Confidence                         123479999999987643  23345689999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+....+......++...                                              .+.++..+.+||
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~li  252 (326)
T 2y0a_A          219 GDTKQETLANVSAVNYEFEDEY----------------------------------------------FSNTSALAKDFI  252 (326)
T ss_dssp             CSSHHHHHHHHHHTCCCCCHHH----------------------------------------------HTTSCHHHHHHH
T ss_pred             CCCHHHHHHHHHhcCCCcCccc----------------------------------------------cccCCHHHHHHH
Confidence            8888777777665544333321                                              235577889999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccCC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .+||+.||.+|||+.|+|+||||++.
T Consensus       253 ~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          253 RRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             HHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             HHHccCChhhCCCHHHHhcCCCccCC
Confidence            99999999999999999999999875

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=6.4e-51  Score=385.51  Aligned_cols=253  Identities=25%  Similarity=0.444  Sum_probs=211.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++++.||+|+||.||+|++..+++.||||+++...    .....+..|..+++.+.     .||||+++++++.+.
T Consensus         8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~hp~iv~l~~~~~~~   82 (345)
T 3a8x_A            8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS-----NHPFLVGLHSCFQTE   82 (345)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTT-----TCTTBCCEEEEEECS
T ss_pred             hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcC-----CCCccCeEEEEEEeC
Confidence            357999999999999999999999999999999997532    22344667888877763     479999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+|+||||+ |++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+                 
T Consensus        83 ~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll-----------------  143 (345)
T 3a8x_A           83 SRLFFVIEYVNGGDLMFHMQRQR--KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL-----------------  143 (345)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE-----------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE-----------------
Confidence            9999999999 899999998765  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             +.++.+||+|||++...   .......+||+.|+|||++.+..++.++|||||||++|+|++|..||......
T Consensus       144 -------~~~g~~kL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~  216 (345)
T 3a8x_A          144 -------DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSS  216 (345)
T ss_dssp             -------CTTSCEEECCGGGCBCSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-
T ss_pred             -------CCCCCEEEEeccccccccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccc
Confidence                   45678999999998752   23345678999999999999999999999999999999999999999753221


Q ss_pred             ---------HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHH
Q 015867          297 ---------EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL  367 (399)
Q Consensus       297 ---------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (399)
                               .....+...                                                  ....+..++.++
T Consensus       217 ~~~~~~~~~~~~~~i~~~--------------------------------------------------~~~~p~~~s~~~  246 (345)
T 3a8x_A          217 DNPDQNTEDYLFQVILEK--------------------------------------------------QIRIPRSLSVKA  246 (345)
T ss_dssp             ------CHHHHHHHHHHC--------------------------------------------------CCCCCTTSCHHH
T ss_pred             cccccccHHHHHHHHHcC--------------------------------------------------CCCCCCCCCHHH
Confidence                     111111111                                                  011234567889


Q ss_pred             HHHHHHccccCCCCCCCH------HHHhCCccccCCC
Q 015867          368 TDLLHGLLRYDPSERLTA------RQALNHPFFRNLN  398 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~------~ell~hp~f~~~~  398 (399)
                      .+||.+||+.||.+|||+      +|+++||||++++
T Consensus       247 ~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~~  283 (345)
T 3a8x_A          247 ASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVD  283 (345)
T ss_dssp             HHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTCC
T ss_pred             HHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCCC
Confidence            999999999999999995      8999999999874

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=4.8e-51  Score=378.70  Aligned_cols=255  Identities=25%  Similarity=0.416  Sum_probs=217.7

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ..++|++.+.||+|+||+||+|.+..+++.||||++.... .....+..|+.+++.+.      ||||+++++++...+.
T Consensus        18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~~~   91 (297)
T 3fxz_A           18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK------NPNIVNYLDSYLVGDE   91 (297)
T ss_dssp             GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCC------CTTBCCEEEEEEETTE
T ss_pred             hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCC------CCCCCeEeEEEEECCE
Confidence            3467999999999999999999999999999999986533 23455677888888764      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|.+++....   +++..+..++.||+.||+|||++||+||||||+|||+                   
T Consensus        92 ~~lv~e~~~~~~L~~~~~~~~---~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~-------------------  149 (297)
T 3fxz_A           92 LWVVMEYLAGGSLTDVVTETC---MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL-------------------  149 (297)
T ss_dssp             EEEEEECCTTCBHHHHHHHSC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE-------------------
T ss_pred             EEEEEECCCCCCHHHHHhhcC---CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEE-------------------
Confidence            99999999 999999998754   9999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           +.++.+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+..+.
T Consensus       150 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~  224 (297)
T 3fxz_A          150 -----GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA  224 (297)
T ss_dssp             -----CTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             -----CCCCCEEEeeCCCceecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                 4466799999998865432   23456899999999999999999999999999999999999999988877666


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.....+.                                               ...+..++..+.+||.+||+.|
T Consensus       225 ~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~li~~~l~~d  257 (297)
T 3fxz_A          225 LYLIATNGTPE-----------------------------------------------LQNPEKLSAIFRDFLNRCLEMD  257 (297)
T ss_dssp             HHHHHHHCSCC-----------------------------------------------CSCGGGSCHHHHHHHHHHSCSS
T ss_pred             HHHHHhCCCCC-----------------------------------------------CCCccccCHHHHHHHHHHccCC
Confidence            65554332110                                               0122456788999999999999


Q ss_pred             CCCCCCHHHHhCCccccCCC
Q 015867          379 PSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~~  398 (399)
                      |.+|||+.|+++||||+...
T Consensus       258 p~~Rps~~ell~h~~~~~~~  277 (297)
T 3fxz_A          258 VEKRGSAKELLQHQFLKIAK  277 (297)
T ss_dssp             TTTSCCHHHHTTCGGGGGCC
T ss_pred             hhHCcCHHHHhhChhhcccC
Confidence            99999999999999998753

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=4e-51  Score=390.37  Aligned_cols=256  Identities=26%  Similarity=0.413  Sum_probs=211.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhh-cCCCCCcceeeeceeeccCCeE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK-NDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~-~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      .++|++++.||+|+||.||+|++..+++.||||++++.......  .+..++.+... .....||||+++++++.+.+.+
T Consensus        37 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~--~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~  114 (373)
T 2r5t_A           37 PSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKK--EEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKL  114 (373)
T ss_dssp             GGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC---------------CCBCCCCCTTBCCEEEEEECSSEE
T ss_pred             hhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhH--HHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEE
Confidence            46799999999999999999999999999999999764322111  11122222222 2445789999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||||+ |++|.+++.+.+  .+++..++.++.||+.||+|||++||+||||||+|||+                    
T Consensus       115 ~lv~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll--------------------  172 (373)
T 2r5t_A          115 YFVLDYINGGELFYHLQRER--CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL--------------------  172 (373)
T ss_dssp             EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE--------------------
T ss_pred             EEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE--------------------
Confidence            9999999 999999998766  59999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCccc---CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAF---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~---~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                          +.++.+||+|||++..   ........+||+.|+|||++.+..++.++|||||||++|||++|..||.+.+..+..
T Consensus       173 ----~~~g~ikL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~  248 (373)
T 2r5t_A          173 ----DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMY  248 (373)
T ss_dssp             ----CTTSCEEECCCCBCGGGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHH
T ss_pred             ----CCCCCEEEeeCccccccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHH
Confidence                4567899999999875   233446778999999999999999999999999999999999999999988877777


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..|......                                                  .++.++.++.+||.+||+.||
T Consensus       249 ~~i~~~~~~--------------------------------------------------~~~~~~~~~~~li~~lL~~dp  278 (373)
T 2r5t_A          249 DNILNKPLQ--------------------------------------------------LKPNITNSARHLLEGLLQKDR  278 (373)
T ss_dssp             HHHHHSCCC--------------------------------------------------CCSSSCHHHHHHHHHHTCSSG
T ss_pred             HHHHhcccC--------------------------------------------------CCCCCCHHHHHHHHHHcccCH
Confidence            666542211                                                  123567888999999999999


Q ss_pred             CCCCCH----HHHhCCccccCCC
Q 015867          380 SERLTA----RQALNHPFFRNLN  398 (399)
Q Consensus       380 ~~R~t~----~ell~hp~f~~~~  398 (399)
                      .+||++    .++++||||++++
T Consensus       279 ~~R~~~~~~~~~i~~h~~f~~~~  301 (373)
T 2r5t_A          279 TKRLGAKDDFMEIKSHVFFSLIN  301 (373)
T ss_dssp             GGSTTTTTTHHHHHTSGGGTTCC
T ss_pred             HhCCCCCCCHHHHhCCccccCCC
Confidence            999986    6999999999874

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=2.7e-51  Score=403.13  Aligned_cols=285  Identities=27%  Similarity=0.476  Sum_probs=214.3

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++...   ......+..|+++++.+.      |+||+++++++..
T Consensus        50 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~l~~~~~~  123 (458)
T 3rp9_A           50 QIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLN------HDHVVKVLDIVIP  123 (458)
T ss_dssp             CSCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC------CTTBCCEEEECCC
T ss_pred             ccCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCC------CCCCCceEEEEec
Confidence            4567899999999999999999999999999999998642   223456778999998885      5999999999843


Q ss_pred             -----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          140 -----RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       140 -----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                           ...+|+||||++++|.+++....  .+++..++.++.||+.||+|||++|||||||||+||||            
T Consensus       124 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl------------  189 (458)
T 3rp9_A          124 KDVEKFDELYVVLEIADSDFKKLFRTPV--YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLV------------  189 (458)
T ss_dssp             SCTTTCCCEEEEECCCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE------------
T ss_pred             CCcccCceEEEEEeccccchhhhcccCC--CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEE------------
Confidence                 36799999999999999998765  69999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCC------------------------------CCcccccCCCccchhhh-h
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ------------------------------NHSSIVSTRHYRAPEVI-L  263 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------------------------------~~~~~~gt~~y~aPE~~-~  263 (399)
                                  +.++.+||+|||++.....                              .....+||+.|+|||++ .
T Consensus       190 ------------~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~  257 (458)
T 3rp9_A          190 ------------NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILL  257 (458)
T ss_dssp             ------------CTTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHHHTT
T ss_pred             ------------CCCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHHhhC
Confidence                        4566799999998865321                              22456789999999987 4


Q ss_pred             CCCCCCcchhHHHHHHHHHHHh-----------CCCCCCCCC--------------------cHHHHHHHHHHhCCCCHH
Q 015867          264 GLGWSYPCDMWSVGCILVELCT-----------GEALFQTHE--------------------NLEHLAMMERALGPLPEH  312 (399)
Q Consensus       264 ~~~~~~~~DiwslG~il~ell~-----------g~~Pf~~~~--------------------~~~~~~~i~~~~~~~p~~  312 (399)
                      +..|+.++|||||||++|||++           |.++|.+.+                    ..+.+..|....+.++..
T Consensus       258 ~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~  337 (458)
T 3rp9_A          258 QENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEE  337 (458)
T ss_dssp             CCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCCCHH
T ss_pred             CCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCCCHH
Confidence            5679999999999999999998           778887654                    357788888999998887


Q ss_pred             HHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCc
Q 015867          313 MIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHP  392 (399)
Q Consensus       313 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp  392 (399)
                      .+..........+...    +|.               ..........+.++.++.+||.+||+.||.+|||++|+|+||
T Consensus       338 ~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp  398 (458)
T 3rp9_A          338 DIEALEKEDAKRYIRI----FPK---------------REGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHP  398 (458)
T ss_dssp             HHHTSSCHHHHHHHTT----SCC---------------CCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSG
T ss_pred             HHhhcCCHHHHHHHHh----cCC---------------CCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCH
Confidence            7665432211111000    000               000111223356788999999999999999999999999999


Q ss_pred             cccCCC
Q 015867          393 FFRNLN  398 (399)
Q Consensus       393 ~f~~~~  398 (399)
                      ||+++.
T Consensus       399 ~f~~~~  404 (458)
T 3rp9_A          399 FFKEVR  404 (458)
T ss_dssp             GGTTTC
T ss_pred             hhhhcC
Confidence            999873

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=4.9e-51  Score=377.59  Aligned_cols=280  Identities=30%  Similarity=0.498  Sum_probs=223.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++++.||+|+||+||+|.+..+++.||||++....   .....+..|+.+++.+.      |+||+++++++.+++.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~   75 (292)
T 3o0g_A            2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK------HKNIVRLHDVLHSDKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC------CTTBCCEEEEEEETTE
T ss_pred             CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCC------CCCEeeEEeEEEeCCE
Confidence            57999999999999999999999999999999997432   22345566777777664      6999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .++||||++++|.+.+..... .+++..++.++.||+.||+|||++||+||||||+|||+                    
T Consensus        76 ~~lv~e~~~~~l~~~~~~~~~-~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~--------------------  134 (292)
T 3o0g_A           76 LTLVFEFCDQDLKKYFDSCNG-DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI--------------------  134 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE--------------------
T ss_pred             EEEEEecCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE--------------------
Confidence            999999997788887766432 69999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCC-CCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEAL-FQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~P-f~~~~~~~  297 (399)
                          +.++.+||+|||++.....   ......||+.|+|||++.+.. ++.++|||||||++|+|++|..| |.+.+..+
T Consensus       135 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~  210 (292)
T 3o0g_A          135 ----NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD  210 (292)
T ss_dssp             ----CTTSCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHH
T ss_pred             ----cCCCCEEEeecccceecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHH
Confidence                4567899999999875432   234567899999999998765 89999999999999999987766 67777788


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      .+..+.+..+.++...+.........       ..++...              .........+.++.++.+||.+||+.
T Consensus       211 ~~~~i~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~--------------~~~~~~~~~~~~~~~~~~li~~~L~~  269 (292)
T 3o0g_A          211 QLKRIFRLLGTPTEEQWPSMTKLPDY-------KPYPMYP--------------ATTSLVNVVPKLNATGRDLLQNLLKC  269 (292)
T ss_dssp             HHHHHHHHHCCCCTTTCTTGGGSTTC-------CCCCCCC--------------TTCCCTTTSTTCCHHHHHHHHHHSCS
T ss_pred             HHHHHHHHhCCCChhhhhhhcccccc-------ccccccc--------------CCcchhhcccccChHHHHHHHHHhcc
Confidence            88888888877765543332211110       0000000              00011122346788899999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|||++|+|+||||++.
T Consensus       270 dP~~R~t~~e~l~hp~f~~~  289 (292)
T 3o0g_A          270 NPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             SGGGSCCHHHHHTSGGGTTC
T ss_pred             ChhhCCCHHHHhcCcccccC
Confidence            99999999999999999985

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=4.3e-51  Score=398.58  Aligned_cols=260  Identities=25%  Similarity=0.430  Sum_probs=222.8

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+|+.||+|++....   .....+..|+++++.+.      ||||+++++++.
T Consensus         7 ~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~------hpnIv~l~~~~~   80 (444)
T 3soa_A            7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLK------HPNIVRLHDSIS   80 (444)
T ss_dssp             CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCC------BTTBCCEEEEEE
T ss_pred             ccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC------CcCCCeEEEEEE
Confidence            456678999999999999999999999999999999997532   23455778899988885      599999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +.+..|+||||+ |++|.+.+...+  .+++..+..++.||+.||.|||++||+||||||+|||++.+            
T Consensus        81 ~~~~~~lv~E~~~gg~L~~~i~~~~--~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~------------  146 (444)
T 3soa_A           81 EEGHHYLIFDLVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASK------------  146 (444)
T ss_dssp             CSSEEEEEECCCBCCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBS------------
T ss_pred             ECCEEEEEEEeCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecc------------
Confidence            999999999999 999999998876  59999999999999999999999999999999999999643            


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                               ..++.+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|.+||.+.+
T Consensus       147 ---------~~~~~vkL~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~  217 (444)
T 3soa_A          147 ---------LKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDED  217 (444)
T ss_dssp             ---------STTCCEEECCCSSCBCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             ---------CCCCcEEEccCceeEEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCcc
Confidence                     24678999999998764433   245689999999999999999999999999999999999999999988


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....+......++.                                              ..++.+++++.+||.+|
T Consensus       218 ~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~  251 (444)
T 3soa_A          218 QHRLYQQIKAGAYDFPS----------------------------------------------PEWDTVTPEAKDLINKM  251 (444)
T ss_dssp             HHHHHHHHHHTCCCCCT----------------------------------------------TTTTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCc----------------------------------------------cccccCCHHHHHHHHHH
Confidence            88887777665433331                                              11235678899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccC
Q 015867          375 LRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |+.||.+|||+.|+|+||||++
T Consensus       252 L~~dP~~Rpta~e~L~hp~~~~  273 (444)
T 3soa_A          252 LTINPSKRITAAEALKHPWISH  273 (444)
T ss_dssp             SCSSTTTSCCHHHHHHSCTTHH
T ss_pred             cCCChhHCCCHHHHhcCccccC
Confidence            9999999999999999999974

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=1.1e-51  Score=382.97  Aligned_cols=193  Identities=22%  Similarity=0.278  Sum_probs=156.9

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC---
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN---  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~---  141 (399)
                      .++|.+.++||+|+||+||+|++  +|+.||||+++....  ..+..|.++..    .....|||||++++++.+++   
T Consensus         2 ar~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~~--~~~~~e~Ei~~----~~~l~HpNIv~l~g~~~~~~~~~   73 (303)
T 3hmm_A            2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSREE--RSWFREAEIYQ----TVMLRHENILGFIAADNKDNGTW   73 (303)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGGH--HHHHHHHHHHT----STTCCCTTBCCEEEEEEEECSSS
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccch--hhHHHHHHHHH----HhcCCCCCCCcEEEEEEecCCCc
Confidence            46799999999999999999986  588999999975432  33333433332    23346899999999987653   


Q ss_pred             -eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCCCcEEEeecccccCC
Q 015867          142 -HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL--------RLIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       142 -~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~--------givH~Dikp~NIll~~~~~~~~~  211 (399)
                       .+||||||| +|+|.++++...   +++..+..++.|++.||+|||++        +||||||||+||||         
T Consensus        74 ~~~~lV~Ey~~~gsL~~~l~~~~---l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl---------  141 (303)
T 3hmm_A           74 TQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---------  141 (303)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEE---------
T ss_pred             eEEEEEecCCCCCcHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEE---------
Confidence             689999999 999999998754   89999999999999999999987        99999999999999         


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCC------CCCCcchhHHHHH
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGL------GWSYPCDMWSVGC  278 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~DiwslG~  278 (399)
                                     +.++.+||+|||+|......       ....+||+.|||||++.+.      .|+.++|||||||
T Consensus       142 ---------------~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gv  206 (303)
T 3hmm_A          142 ---------------KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGL  206 (303)
T ss_dssp             ---------------CTTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHH
T ss_pred             ---------------CCCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHH
Confidence                           45778999999998653222       2345899999999999765      3678999999999


Q ss_pred             HHHHHHhCCCCCCC
Q 015867          279 ILVELCTGEALFQT  292 (399)
Q Consensus       279 il~ell~g~~Pf~~  292 (399)
                      +||||+||.+||..
T Consensus       207 vl~El~tg~~~~~~  220 (303)
T 3hmm_A          207 VFWEIARRCSIGGI  220 (303)
T ss_dssp             HHHHHHHTBCBTTB
T ss_pred             HHHHHHHCCCCCCc
Confidence            99999999888754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=1.9e-51  Score=386.97  Aligned_cols=290  Identities=27%  Similarity=0.484  Sum_probs=222.4

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ....++|++.+.||+|+||+||+|.+..+++.||||+++....   ....+..|+.+++.+.      |+||+++++++.
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~  103 (329)
T 3gbz_A           30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ------HRNIIELKSVIH  103 (329)
T ss_dssp             --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCC------CTTBCCEEEEEE
T ss_pred             ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcC------CCCcceEEEEEe
Confidence            3445689999999999999999999999999999999864322   2234556777777764      699999999999


Q ss_pred             cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          139 YRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       139 ~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      +.+..++||||++++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+..++.           
T Consensus       104 ~~~~~~lv~e~~~~~L~~~~~~~~--~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~-----------  170 (329)
T 3gbz_A          104 HNHRLHLIFEYAENDLKKYMDKNP--DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDA-----------  170 (329)
T ss_dssp             ETTEEEEEEECCSEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC--------------
T ss_pred             cCCEEEEEEecCCCCHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCC-----------
Confidence            999999999999889999998876  5999999999999999999999999999999999999965431           


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                              +....+||+|||++....   ......+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+
T Consensus       171 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  242 (329)
T 3gbz_A          171 --------SETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDS  242 (329)
T ss_dssp             ----------CCEEEECCTTHHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             --------CccceEEECcCCCccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCC
Confidence                    346679999999886533   223456789999999999875 58999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+.+..+....+.++...+........      ....+|....              ..........++.++.+||.+|
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~li~~~  302 (329)
T 3gbz_A          243 EIDQLFKIFEVLGLPDDTTWPGVTALPD------WKQSFPKFRG--------------KTLKRVLGALLDDEGLDLLTAM  302 (329)
T ss_dssp             HHHHHHHHHHHHCCCCTTTSTTGGGSTT------CCTTCCCCCC--------------CCHHHHHGGGSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCchhhhhhhhhhhh------hhhhhhhhcc--------------ccHhhhcccccCHHHHHHHHHH
Confidence            9999999888877766543332211100      0011111000              0011112234678899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      |+.||.+|||++|+|+||||++++
T Consensus       303 L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          303 LEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             TCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             ccCChhhCCCHHHHhCCcccCCCC
Confidence            999999999999999999999874

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=7.7e-51  Score=375.60  Aligned_cols=278  Identities=31%  Similarity=0.502  Sum_probs=217.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++++.||+|+||.||+|.+ .+++.||+|++.....   ....+..|+++++.+.      ||||+++++++.+.+.
T Consensus         2 ~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~   74 (288)
T 1ob3_A            2 EKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELK------HSNIVKLYDVIHTKKR   74 (288)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC------CTTBCCEEEEEECSSC
T ss_pred             ccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcC------CCCEeeeeeEEccCCe
Confidence            5799999999999999999988 6788999999864322   2345667777777664      6999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .++||||+.++|.+++..... .+++..++.++.||+.||+|||++||+||||||+|||+                    
T Consensus        75 ~~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~--------------------  133 (288)
T 1ob3_A           75 LVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI--------------------  133 (288)
T ss_dssp             EEEEEECCSEEHHHHHHTSTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE--------------------
T ss_pred             EEEEEEecCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE--------------------
Confidence            999999997799999986532 69999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                          +.++.+||+|||++.....   ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+..+.
T Consensus       134 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~  209 (288)
T 1ob3_A          134 ----NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ  209 (288)
T ss_dssp             ----CTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ----cCCCCEEEeECccccccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                4567899999998865332   22445789999999999764 589999999999999999999999999998888


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccc--cccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEK--YFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +..+.+..+.++...++........  .+......                       ......+.++.++.+||.+||+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~li~~~L~  266 (288)
T 1ob3_A          210 LMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL-----------------------PWESFLKGLDESGIDLLSKMLK  266 (288)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCC-----------------------CGGGTCCSCCHHHHHHHHHHTC
T ss_pred             HHHHHHHHCCCChhhchhhhcccccccccccccCc-----------------------cHHHHhhhcCHHHHHHHHHHcC
Confidence            8888887776554332221110000  00000000                       0012234578889999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCCC
Q 015867          377 YDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .||.+|||++|+++||||++.|
T Consensus       267 ~dP~~Rpt~~e~l~hp~f~~~n  288 (288)
T 1ob3_A          267 LDPNQRITAKQALEHAYFKENN  288 (288)
T ss_dssp             SSTTTSCCHHHHHTSGGGGC--
T ss_pred             CCcccCCCHHHHhcCcchhhcC
Confidence            9999999999999999999864

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=2.1e-50  Score=386.08  Aligned_cols=307  Identities=30%  Similarity=0.553  Sum_probs=240.9

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCC-----CCCcceeeeceeecc
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDK-----GGSSHCVQIRNWFDY  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~-----~~~~~iv~~~~~~~~  139 (399)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.........+..|+.+++.+.+...     .+|+||+++++++..
T Consensus        18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~   97 (373)
T 1q8y_A           18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH   97 (373)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred             CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence            468999999999999999999999999999999998766666778889999999886432     236899999999876


Q ss_pred             CC----eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCc
Q 015867          140 RN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       140 ~~----~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      .+    ..++|||+++++|.+++.......+++..+..++.||+.||+|||++ ||+||||||+|||++.++.       
T Consensus        98 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~-------  170 (373)
T 1q8y_A           98 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS-------  170 (373)
T ss_dssp             EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEET-------
T ss_pred             cCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCC-------
Confidence            54    89999999999999999886655799999999999999999999998 9999999999999965431       


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                                 .+....+||+|||++...........||+.|+|||++.+..++.++|||||||++|+|++|..||...+
T Consensus       171 -----------~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  239 (373)
T 1q8y_A          171 -----------PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDE  239 (373)
T ss_dssp             -----------TTTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC----
T ss_pred             -----------CcCcceEEEcccccccccCCCCCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCc
Confidence                       023457999999999877666667789999999999999999999999999999999999999998654


Q ss_pred             ------cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          295 ------NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       295 ------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                            ..+.+..+....+.+|..++....... .++............... ...      ............++.++.
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~  311 (373)
T 1q8y_A          240 GHSYTKDDDHIAQIIELLGELPSYLLRNGKYTR-TFFNSRGLLRNISKLKFW-PLE------DVLTEKYKFSKDEAKEIS  311 (373)
T ss_dssp             -----CHHHHHHHHHHHHCSCCHHHHHHCTTHH-HHBCC--CBSSCCCCCBC-CHH------HHHHHTTCCCHHHHHHHH
T ss_pred             ccccCChHHHHHHHHHhcCCCCHHHHhccchhh-hhcCCcchhccccccccc-chh------hhhhhcccCCcchHHHHH
Confidence                  566788888899999988776543211 111111111000000000 000      000111223457788999


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||.+||+.||.+|||++|+|+||||++.
T Consensus       312 ~li~~~L~~dP~~Rpt~~ell~hp~f~~~  340 (373)
T 1q8y_A          312 DFLSPMLQLDPRKRADAGGLVNHPWLKDT  340 (373)
T ss_dssp             HHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             HHHHHHhccCccccCCHHHHhhChhhhcc
Confidence            99999999999999999999999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=3.9e-51  Score=394.72  Aligned_cols=256  Identities=25%  Similarity=0.432  Sum_probs=218.3

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ..++|++++.||+|+||.||+|++..+++.||+|++++..    .....+..|..+++.+.      ||||+++++++.+
T Consensus        67 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~------hp~Iv~l~~~~~~  140 (410)
T 3v8s_A           67 KAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFAN------SPWVVQLFYAFQD  140 (410)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCC------CTTBCCEEEEEEC
T ss_pred             CccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCC------CCCCCeEEEEEEE
Confidence            3568999999999999999999999999999999997532    12234667888888774      6999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+.+|+||||+ ||+|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||+                
T Consensus       141 ~~~~~lV~E~~~gg~L~~~l~~~---~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl----------------  201 (410)
T 3v8s_A          141 DRYLYMVMEYMPGGDLVNLMSNY---DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL----------------  201 (410)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----------------
T ss_pred             CCEEEEEEeCCCCCcHHHHHHcC---CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeE----------------
Confidence            99999999999 99999999865   39999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCC----CCCcchhHHHHHHHHHHHhCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLG----WSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~----~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                              +.++.+||+|||++......    ..+.+||+.|+|||++.+..    ++.++|||||||++|+|++|..||
T Consensus       202 --------~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf  273 (410)
T 3v8s_A          202 --------DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF  273 (410)
T ss_dssp             --------CTTSCEEECCCTTCEECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTT
T ss_pred             --------CCCCCEEEeccceeEeeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCC
Confidence                    45678999999998764433    24678999999999998765    889999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .+.+..+....|......                      ..+|                        ....++.++++|
T Consensus       274 ~~~~~~~~~~~i~~~~~~----------------------~~~p------------------------~~~~~s~~~~~l  307 (410)
T 3v8s_A          274 YADSLVGTYSKIMNHKNS----------------------LTFP------------------------DDNDISKEAKNL  307 (410)
T ss_dssp             CCSSHHHHHHHHHTHHHH----------------------CCCC------------------------TTCCCCHHHHHH
T ss_pred             CCCChhhHHHHHHhcccc----------------------ccCC------------------------CcccccHHHHHH
Confidence            998888877777543210                      0111                        113567889999


Q ss_pred             HHHccccCCCC--CCCHHHHhCCccccCCC
Q 015867          371 LHGLLRYDPSE--RLTARQALNHPFFRNLN  398 (399)
Q Consensus       371 i~~~L~~dP~~--R~t~~ell~hp~f~~~~  398 (399)
                      |.+||+.+|.+  |++++|+++||||++++
T Consensus       308 i~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~  337 (410)
T 3v8s_A          308 ICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  337 (410)
T ss_dssp             HHHHSSCGGGCTTSSCHHHHHTSGGGCCSS
T ss_pred             HHHHccChhhhCCCCCHHHHhcCccccCCC
Confidence            99999999988  99999999999999874

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=1.3e-51  Score=387.24  Aligned_cols=283  Identities=31%  Similarity=0.492  Sum_probs=221.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhh--hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY--RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++|++++.||+|+||.||+|.+..+++.||||+++.....  ...+..|+++++.+.      |+||+++++++.+.+..
T Consensus         2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~   75 (324)
T 3mtl_A            2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK------HANIVTLHDIIHTEKSL   75 (324)
T ss_dssp             CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCC------CTTBCCEEEEEECSSCE
T ss_pred             CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcC------CCCCCeeeeEEeeCCEE
Confidence            5799999999999999999999999999999998653321  113445777777664      69999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||++++|.+++...+. .+++..++.++.||+.||.|||++||+||||||+|||+                     
T Consensus        76 ~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~---------------------  133 (324)
T 3mtl_A           76 TLVFEYLDKDLKQYLDDCGN-IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI---------------------  133 (324)
T ss_dssp             EEEEECCSEEHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEE---------------------
T ss_pred             EEEecccccCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEE---------------------
Confidence            99999998899999987643 69999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                         +.++.+||+|||++......   ....+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.+..+.+
T Consensus       134 ---~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  210 (324)
T 3mtl_A          134 ---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL  210 (324)
T ss_dssp             ---CTTCCEEECSSSEEECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHH
T ss_pred             ---CCCCCEEEccCcccccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence               44667999999988654322   234578999999999987 57899999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+....+.++...++.....                   .. ..................+.++.++.+||.+||+.||
T Consensus       211 ~~i~~~~~~~~~~~~~~~~~~-------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  270 (324)
T 3mtl_A          211 HFIFRILGTPTEETWPGILSN-------------------EE-FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEG  270 (324)
T ss_dssp             HHHHHHHCCCCTTTSTTGGGC-------------------HH-HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSG
T ss_pred             HHHHHHhCCCChHhchhhhcc-------------------hh-hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCc
Confidence            999998887765433222111                   00 0000000000111122335678899999999999999


Q ss_pred             CCCCCHHHHhCCccccCCCC
Q 015867          380 SERLTARQALNHPFFRNLNE  399 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~~e  399 (399)
                      .+|||++|+|+||||+++.|
T Consensus       271 ~~R~t~~e~l~hp~f~~~~~  290 (324)
T 3mtl_A          271 RNRISAEDAMKHPFFLSLGE  290 (324)
T ss_dssp             GGSCCHHHHTTSGGGGGGCS
T ss_pred             ccCCCHHHHhcChhhhhccc
Confidence            99999999999999998754

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=8.9e-51  Score=380.43  Aligned_cols=288  Identities=31%  Similarity=0.516  Sum_probs=215.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .++|++++.||+|+||.||+|.+..+++.||||+++...  .....+..|+++++.+.      ||||+++++++.+++.
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~~~   77 (317)
T 2pmi_A            4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK------HENIVRLYDVIHTENK   77 (317)
T ss_dssp             ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCC------BTTBCCEEEEECCTTE
T ss_pred             ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcC------CCCcceEEEEEEECCe
Confidence            357999999999999999999999999999999997532  22355667888877764      6999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcC----CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNK----YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~----~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .++||||+.++|.+++....    ...+++..++.++.||+.||.|||++||+||||||+|||+                
T Consensus        78 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~----------------  141 (317)
T 2pmi_A           78 LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLI----------------  141 (317)
T ss_dssp             EEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE----------------
T ss_pred             EEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEE----------------
Confidence            99999999889999987542    1358999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                              +.++.+||+|||++.....   .....+||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+
T Consensus       142 --------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  213 (317)
T 2pmi_A          142 --------NKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTN  213 (317)
T ss_dssp             --------CTTCCEEECCCSSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             --------cCCCCEEECcCccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                    4567799999999876432   23456799999999999874 68999999999999999999999999999


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+.+..+....+.++...+..........  .    .++...  ....        ...........++.++.+||.+|
T Consensus       214 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~--~~~~--------~~~~~~~~~~~~~~~l~~li~~~  277 (317)
T 2pmi_A          214 DEEQLKLIFDIMGTPNESLWPSVTKLPKYN--P----NIQQRP--PRDL--------RQVLQPHTKEPLDGNLMDFLHGL  277 (317)
T ss_dssp             HHHHHHHHHHHHCSCCTTTCGGGGGCTTCC--T----TCCCCC--CCCS--------HHHHGGGCSSCCCHHHHHHHHHH
T ss_pred             hHHHHHHHHHHhCCCChhHhhhhhhhhhcc--c----cccccc--chhH--------HHhhcccccccCCHHHHHHHHHH
Confidence            999999999888877765544432211100  0    000000  0000        00011122345778899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      |+.||.+|||+.|+|+||||++..
T Consensus       278 L~~dP~~Rpt~~e~l~hp~f~~~~  301 (317)
T 2pmi_A          278 LQLNPDMRLSAKQALHHPWFAEYY  301 (317)
T ss_dssp             SCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred             CCCCcccCCCHHHHhCChhhhccc
Confidence            999999999999999999999863

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=2.8e-50  Score=392.73  Aligned_cols=284  Identities=27%  Similarity=0.454  Sum_probs=224.9

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++....   .....+..|+++++.+.      |+||+++++++..
T Consensus        23 ~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~nIv~l~~~~~~   96 (432)
T 3n9x_A           23 HVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLK------SDYIIRLYDLIIP   96 (432)
T ss_dssp             CCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCC------CTTBCCEEEECCC
T ss_pred             eecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcC------CCCcceEEEEEec
Confidence            45678999999999999999999999999999999996532   23456778888888885      5999999999876


Q ss_pred             C-----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          140 R-----NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       140 ~-----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      .     +..|+||||++++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+            
T Consensus        97 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~--~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl------------  162 (432)
T 3n9x_A           97 DDLLKFDELYIVLEIADSDLKKLFKTPI--FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL------------  162 (432)
T ss_dssp             SCTTTCCCEEEEEECCSEEHHHHHHSSC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE------------
T ss_pred             CCCCcCCeEEEEEecCCcCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEE------------
Confidence            5     5799999999889999998765  59999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCC-------------------------CcccccCCCccchhhh-hCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-------------------------HSSIVSTRHYRAPEVI-LGLGWS  268 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------------------~~~~~gt~~y~aPE~~-~~~~~~  268 (399)
                                  +.++.+||+|||++......                         ....+||+.|+|||++ .+..++
T Consensus       163 ------------~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~  230 (432)
T 3n9x_A          163 ------------NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYT  230 (432)
T ss_dssp             ------------CTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCSCCC
T ss_pred             ------------CCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCC
Confidence                        45677999999998753321                         2567899999999986 456799


Q ss_pred             CcchhHHHHHHHHHHHh-----------CCCCCCCCC-----------------cHHHHHHHHHHhCCCCHHHHHHhccc
Q 015867          269 YPCDMWSVGCILVELCT-----------GEALFQTHE-----------------NLEHLAMMERALGPLPEHMIRRASRG  320 (399)
Q Consensus       269 ~~~DiwslG~il~ell~-----------g~~Pf~~~~-----------------~~~~~~~i~~~~~~~p~~~~~~~~~~  320 (399)
                      .++|||||||++|||++           |.++|.+.+                 ..+++..|....+.++...+......
T Consensus       231 ~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~~~~  310 (432)
T 3n9x_A          231 KSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKP  310 (432)
T ss_dssp             THHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTCCCH
T ss_pred             cccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhccCH
Confidence            99999999999999998           455555543                 36788889999999988776644321


Q ss_pred             ccccccCCcccCCCCCccchHHHHHHHhhhh-hhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          321 TEKYFRRGSRLNWPEGAVSRESIKAVKKLDR-LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       321 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ...                    ........ .........+.+++++.+||.+||+.||.+|||++|+|+||||+++.
T Consensus       311 ~~~--------------------~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~  369 (432)
T 3n9x_A          311 EVI--------------------KYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR  369 (432)
T ss_dssp             HHH--------------------HHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred             HHH--------------------HHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence            111                    11100000 00001122356788999999999999999999999999999999874

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=1.3e-50  Score=384.52  Aligned_cols=262  Identities=27%  Similarity=0.438  Sum_probs=216.6

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh------hhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||||++.....      ....+..|+.+++.+.      ||||+++++
T Consensus        20 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~~~~   93 (351)
T 3c0i_A           20 VLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK------HPHIVELLE   93 (351)
T ss_dssp             CCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCC------CTTBCCEEE
T ss_pred             CccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCC------CCCCCcEEE
Confidence            3456789999999999999999999999999999999964321      2456778999998885      599999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      ++.+.+..|+||||+ |++|.+++...  ....+++..+..++.||+.||+|||++||+||||||+|||++.++      
T Consensus        94 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~------  167 (351)
T 3c0i_A           94 TYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKE------  167 (351)
T ss_dssp             EEEETTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSS------
T ss_pred             EEEeCCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCC------
Confidence            999999999999999 89999888643  223589999999999999999999999999999999999996532      


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                     ....+||+|||++......   ....+||+.|+|||++.+..++.++|||||||++|+|++|..|
T Consensus       168 ---------------~~~~vkl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~p  232 (351)
T 3c0i_A          168 ---------------NSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP  232 (351)
T ss_dssp             ---------------TTCCEEECCCTTCEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ---------------CCCcEEEecCcceeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCC
Confidence                           3456999999998764432   3456899999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.. .+....+.......+..                                              .++.++.++.+
T Consensus       233 f~~~~-~~~~~~i~~~~~~~~~~----------------------------------------------~~~~~s~~~~~  265 (351)
T 3c0i_A          233 FYGTK-ERLFEGIIKGKYKMNPR----------------------------------------------QWSHISESAKD  265 (351)
T ss_dssp             SCSSH-HHHHHHHHHTCCCCCHH----------------------------------------------HHTTSCHHHHH
T ss_pred             CCCcH-HHHHHHHHcCCCCCCcc----------------------------------------------ccccCCHHHHH
Confidence            98743 33344443322222211                                              11356788999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+||+.||.+|||+.|+|+||||++.
T Consensus       266 li~~~L~~dP~~R~s~~e~l~hp~~~~~  293 (351)
T 3c0i_A          266 LVRRMLMLDPAERITVYEALNHPWLKER  293 (351)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHTSHHHHTH
T ss_pred             HHHHHCCCChhHCcCHHHHhcChhhcCC
Confidence            9999999999999999999999999863

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=4.5e-51  Score=386.07  Aligned_cols=259  Identities=26%  Similarity=0.432  Sum_probs=214.0

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||||++....   .....|++++..+.     .||||+++++++.+.+
T Consensus        18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~---~~~~~E~~~l~~~~-----~hp~iv~~~~~~~~~~   89 (342)
T 2qr7_A           18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSK---RDPTEEIEILLRYG-----QHPNIITLKDVYDDGK   89 (342)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTT---CCCHHHHHHHHHHT-----TSTTBCCEEEEEECSS
T ss_pred             cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEccc---CChHHHHHHHHHhc-----CCCCcCeEEEEEEcCC
Confidence            345678999999999999999999999999999999997543   23456788887774     4799999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||+ |++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||+..++              
T Consensus        90 ~~~lv~E~~~gg~L~~~i~~~~--~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~--------------  153 (342)
T 2qr7_A           90 YVYVVTELMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDES--------------  153 (342)
T ss_dssp             EEEEEECCCCSCBHHHHHHTCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS--------------
T ss_pred             EEEEEEeCCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCC--------------
Confidence            999999999 999999998765  599999999999999999999999999999999999985321              


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC---C
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH---E  294 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~---~  294 (399)
                            .....+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.   +
T Consensus       154 ------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  227 (342)
T 2qr7_A          154 ------GNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT  227 (342)
T ss_dssp             ------CSGGGEEECCCTTCEECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC
T ss_pred             ------CCcCeEEEEECCCcccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC
Confidence                  1234699999999875332   234668999999999999888999999999999999999999999863   3


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....+......++                                              ...++.++.++.+||.+|
T Consensus       228 ~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~~s~~~~~li~~~  261 (342)
T 2qr7_A          228 PEEILARIGSGKFSLS----------------------------------------------GGYWNSVSDTAKDLVSKM  261 (342)
T ss_dssp             HHHHHHHHHHCCCCCC----------------------------------------------STTTTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHccCCcccC----------------------------------------------ccccccCCHHHHHHHHHH
Confidence            3344444433221111                                              112245788899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccC
Q 015867          375 LRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |+.||.+|||+.++++||||.+
T Consensus       262 L~~dP~~R~t~~~il~hp~~~~  283 (342)
T 2qr7_A          262 LHVDPHQRLTAALVLRHPWIVH  283 (342)
T ss_dssp             TCSSTTTSCCHHHHTTSHHHHT
T ss_pred             CCCChhHCcCHHHHhcCCeecC
Confidence            9999999999999999999965

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=8e-50  Score=372.64  Aligned_cols=284  Identities=33%  Similarity=0.577  Sum_probs=225.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .++|++++.||+|+||.||+|.+..+++.||||++....   .....+..|+++++.+.      |+||+++++++...+
T Consensus         2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~   75 (311)
T 4agu_A            2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK------HPNLVNLLEVFRRKR   75 (311)
T ss_dssp             -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCC------CTTBCCEEEEEEETT
T ss_pred             cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCC------CCCccchhheeecCC
Confidence            468999999999999999999999999999999985432   22455667888888875      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||+                  
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~------------------  135 (311)
T 4agu_A           76 RLHLVFEYCDHTVLHELDRYQR--GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILI------------------  135 (311)
T ss_dssp             EEEEEEECCSEEHHHHHHHTSS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE------------------
T ss_pred             eEEEEEEeCCCchHHHHHhhhc--CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEE------------------
Confidence            999999999 778888877655  59999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                            +.++.++|+|||++......   .....||+.|+|||++.+ ..++.++||||||+++|+|++|..||.+.+..
T Consensus       136 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~  209 (311)
T 4agu_A          136 ------TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDV  209 (311)
T ss_dssp             ------CTTSCEEECCCTTCEECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH
T ss_pred             ------cCCCCEEEeeCCCchhccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH
Confidence                  45678999999998764322   245679999999999987 57899999999999999999999999999999


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....+....+..++...........  + .......+....                ......+.++.++.+||.+||+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~li~~~L~  270 (311)
T 4agu_A          210 DQLYLIRKTLGDLIPRHQQVFSTNQY--F-SGVKIPDPEDME----------------PLELKFPNISYPALGLLKGCLH  270 (311)
T ss_dssp             HHHHHHHHHHCSCCHHHHHHHHTCGG--G-TTCCCCCCSSCC----------------CHHHHCTTCCHHHHHHHHHHCC
T ss_pred             HHHHHHHHHhcccccccccccccccc--c-ccCcCCCccccc----------------hhhhhcccccHHHHHHHHHHcc
Confidence            99999998888887765444322211  1 111111111100                0011124678889999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCCCC
Q 015867          377 YDPSERLTARQALNHPFFRNLNE  399 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~~e  399 (399)
                      .||.+|||++|+++||||+++.+
T Consensus       271 ~dP~~Rpt~~ell~hp~f~~~~~  293 (311)
T 4agu_A          271 MDPTERLTCEQLLHHPYFENIRE  293 (311)
T ss_dssp             SSTTTSCCHHHHHTSGGGTTCC-
T ss_pred             CChhhcCCHHHHhcChHHHhccC
Confidence            99999999999999999999753

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.5e-50  Score=393.51  Aligned_cols=260  Identities=24%  Similarity=0.403  Sum_probs=218.2

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ...++|++.+.||+|+||+||+|++..+++.||+|++++...    ....+..|..++..+.      |+||+++++++.
T Consensus        71 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~------hp~Iv~l~~~~~  144 (437)
T 4aw2_A           71 LHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGD------SKWITTLHYAFQ  144 (437)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSC------TTTBCCEEEEEE
T ss_pred             CChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCC------CCCEEEEEEEEe
Confidence            345789999999999999999999999999999999975321    2233677888887764      699999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +.+.+|+||||+ ||+|.+++.+... .+++..++.++.||+.||+|||++|||||||||+|||+               
T Consensus       145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~-~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---------------  208 (437)
T 4aw2_A          145 DDNNLYLVMDYYVGGDLLTLLSKFED-RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM---------------  208 (437)
T ss_dssp             CSSEEEEEECCCTTCBHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------
T ss_pred             eCCEEEEEEecCCCCcHHHHHHHccC-CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeE---------------
Confidence            999999999999 9999999987432 69999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                               +.++.+||+|||++......    ....+||+.|+|||++.     ...|+.++|||||||++|||++|+.
T Consensus       209 ---------~~~g~vkL~DFGla~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~  279 (437)
T 4aw2_A          209 ---------DMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGET  279 (437)
T ss_dssp             ---------CTTSCEEECCCTTCEECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSC
T ss_pred             ---------cCCCCEEEcchhhhhhcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCC
Confidence                     45778999999998654322    23468999999999997     4579999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||.+.+..+....|......                      ..+|.                       ....++.++.
T Consensus       280 Pf~~~~~~~~~~~i~~~~~~----------------------~~~p~-----------------------~~~~~s~~~~  314 (437)
T 4aw2_A          280 PFYAESLVETYGKIMNHKER----------------------FQFPT-----------------------QVTDVSENAK  314 (437)
T ss_dssp             TTCCSSHHHHHHHHHTHHHH----------------------CCCCS-----------------------SCCCSCHHHH
T ss_pred             CCCCCChhHHHHhhhhcccc----------------------ccCCc-----------------------ccccCCHHHH
Confidence            99998888887777542110                      01111                       1134688899


Q ss_pred             HHHHHccccCCCC--CCCHHHHhCCccccCCC
Q 015867          369 DLLHGLLRYDPSE--RLTARQALNHPFFRNLN  398 (399)
Q Consensus       369 ~li~~~L~~dP~~--R~t~~ell~hp~f~~~~  398 (399)
                      +||.+||..+|.+  |++++|+++||||++++
T Consensus       315 dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~  346 (437)
T 4aw2_A          315 DLIRRLICSREHRLGQNGIEDFKKHPFFSGID  346 (437)
T ss_dssp             HHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCC
T ss_pred             HHHHHHhcccccccCCCCHHHHhCCCccCCCC
Confidence            9999999988888  99999999999999874

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=5.2e-51  Score=393.78  Aligned_cols=258  Identities=27%  Similarity=0.465  Sum_probs=202.6

Q ss_pred             cCCCEEEE-eeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc---
Q 015867           64 LTPRYKIL-SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY---  139 (399)
Q Consensus        64 ~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~---  139 (399)
                      +.++|.+. +.||+|+||+||+|.+..+++.||||+++..    .....|++++..+.     .|+||+++++++..   
T Consensus        59 ~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~----~~~~~E~~~~~~~~-----~hp~iv~l~~~~~~~~~  129 (400)
T 1nxk_A           59 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS-----QCPHIVRIVDVYENLYA  129 (400)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT-----TSTTBCCEEEEEEEEET
T ss_pred             ccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc----hhHHHHHHHHHHhc-----CCCCcceEeEEEeeccc
Confidence            34568777 7899999999999999999999999999643    34566777765553     47999999998865   


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          140 -RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       140 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                       .+.+|+||||+ |++|.+++.......+++..++.|+.||+.||.|||++||+||||||+|||++.+            
T Consensus       130 ~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~------------  197 (400)
T 1nxk_A          130 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK------------  197 (400)
T ss_dssp             TEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS------------
T ss_pred             CCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecC------------
Confidence             66899999999 8899999987665569999999999999999999999999999999999999542            


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                               ..++.+||+|||++.....  .....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus       198 ---------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~  268 (400)
T 1nxk_A          198 ---------RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG  268 (400)
T ss_dssp             ---------STTCCEEECCCTTCEECC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTT
T ss_pred             ---------CCCccEEEEecccccccCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCcc
Confidence                     1367899999999876432  23567899999999999999999999999999999999999999976543


Q ss_pred             HH----HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          296 LE----HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       296 ~~----~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..    ....+......++                                              ...+..++.++.+||
T Consensus       269 ~~~~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~~s~~~~~li  302 (400)
T 1nxk_A          269 LAISPGMKTRIRMGQYEFP----------------------------------------------NPEWSEVSEEVKMLI  302 (400)
T ss_dssp             CSSCCSHHHHHHHTCCCCC----------------------------------------------TTTTTTSCHHHHHHH
T ss_pred             ccccHHHHHHHHcCcccCC----------------------------------------------CcccccCCHHHHHHH
Confidence            21    1222221111111                                              011235688899999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccCC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .+||+.||.+|||+.|+++||||.+.
T Consensus       303 ~~~L~~dP~~Rpt~~eil~hp~~~~~  328 (400)
T 1nxk_A          303 RNLLKTEPTQRMTITEFMNHPWIMQS  328 (400)
T ss_dssp             HTTSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHHCCCChhHCcCHHHHhcCccccCC
Confidence            99999999999999999999999753

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=8.8e-51  Score=387.78  Aligned_cols=282  Identities=29%  Similarity=0.524  Sum_probs=212.8

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +.++|++++.||+|+||.||+|.+..+|+.||||++...   ......+..|+++++.+.      |+||+++++++...
T Consensus        27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~~~~~~~~~  100 (367)
T 2fst_X           27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK------HENVIGLLDVFTPA  100 (367)
T ss_dssp             EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC------CTTBCCCSEEECSC
T ss_pred             CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCC------CCCCCcEEEEEecC
Confidence            457899999999999999999999999999999998642   223455667888888875      59999999988653


Q ss_pred             ------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          141 ------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       141 ------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                            ...|+|||+++++|.+++...   .+++..+..++.||+.||.|||++||+||||||+|||+            
T Consensus       101 ~~~~~~~~~~lv~e~~~~~L~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll------------  165 (367)
T 2fst_X          101 RSLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV------------  165 (367)
T ss_dssp             SSGGGCCCCEEEEECCCEECC-----C---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE------------
T ss_pred             CccccCCeEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEE------------
Confidence                  568999999999999998763   59999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                  +.++.+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||.+.
T Consensus       166 ------------~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~  233 (367)
T 2fst_X          166 ------------NEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT  233 (367)
T ss_dssp             ------------CTTCCEEECC---------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ------------CCCCCEEEeeccccccccccCCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                        45678999999999876666667789999999999987 67999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhh-hhhhccchhhhhHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK-NMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~li~  372 (399)
                      +..+.+..|.+..+.++..++..........+.                    ....... .......+.+++.+.+||.
T Consensus       234 ~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~dLl~  293 (367)
T 2fst_X          234 DHIDQLKLILRLVGTPGAELLKKISSESARNYI--------------------QSLTQMPKMNFANVFIGANPLAVDLLE  293 (367)
T ss_dssp             SHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHH--------------------HTSCCCCCCCHHHHTTTCCHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHH--------------------hccCCCCCCCHHHHCCCCCHHHHHHHH
Confidence            999999999999999888776554322111110                    0000000 0001122456788999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||+.||.+|||+.|+|+||||++..
T Consensus       294 ~mL~~dP~~R~t~~e~L~hp~~~~~~  319 (367)
T 2fst_X          294 KMLVLDSDKRITAAQALAHAYFAQYH  319 (367)
T ss_dssp             HHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             HhCCCCcccCcCHHHHhcChhhhhcc
Confidence            99999999999999999999999763

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=3.9e-50  Score=377.65  Aligned_cols=253  Identities=26%  Similarity=0.441  Sum_probs=210.3

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEc---cCCeEEEEEEEecch-----hhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDR---QTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      ..++|++.+.||+|+||.||+|++.   .+++.||||+++...     .....+..|+.+++.+.      |+||+++++
T Consensus        15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~   88 (327)
T 3a62_A           15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK------HPFIVDLIY   88 (327)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCC------CTTBCCEEE
T ss_pred             CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCC------CCCccceeE
Confidence            3467999999999999999999875   689999999997532     22344667888888875      599999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      ++...+..|+||||+ |++|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||+            
T Consensus        89 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill------------  154 (327)
T 3a62_A           89 AFQTGGKLYLILEYLSGGELFMQLEREG--IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML------------  154 (327)
T ss_dssp             EEECSSCEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEE------------
T ss_pred             EEEcCCEEEEEEeCCCCCcHHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEE------------
Confidence            999999999999999 899999998766  59999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                  +.++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       155 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~  222 (327)
T 3a62_A          155 ------------NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFT  222 (327)
T ss_dssp             ------------CTTSCEEECCCSCC----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred             ------------CCCCcEEEEeCCcccccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCC
Confidence                        456789999999886532   22345689999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+....+......+|                                                  +.++.++.+||
T Consensus       223 ~~~~~~~~~~i~~~~~~~p--------------------------------------------------~~~~~~~~~li  252 (327)
T 3a62_A          223 GENRKKTIDKILKCKLNLP--------------------------------------------------PYLTQEARDLL  252 (327)
T ss_dssp             CSSHHHHHHHHHHTCCCCC--------------------------------------------------TTSCHHHHHHH
T ss_pred             CCCHHHHHHHHHhCCCCCC--------------------------------------------------CCCCHHHHHHH
Confidence            8887777666654322221                                                  34577889999


Q ss_pred             HHccccCCCCCC-----CHHHHhCCccccCCC
Q 015867          372 HGLLRYDPSERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~R~-----t~~ell~hp~f~~~~  398 (399)
                      .+||+.||.+||     ++.|+++||||++++
T Consensus       253 ~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~~  284 (327)
T 3a62_A          253 KKLLKRNAASRLGAGPGDAGEVQAHPFFRHIN  284 (327)
T ss_dssp             HHHSCSCGGGSTTSSTTTHHHHHHSGGGSSCC
T ss_pred             HHHHhcCHhhccCCCCCCHHHHHcCCcccCCC
Confidence            999999999999     899999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.7e-50  Score=389.07  Aligned_cols=257  Identities=26%  Similarity=0.381  Sum_probs=216.2

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ...++|++++.||+|+||.||+|++..+++.||||++++..    .....+..|..++..+.      |+||+++++++.
T Consensus        58 ~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~------hp~Iv~l~~~~~  131 (412)
T 2vd5_A           58 LQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGD------RRWITQLHFAFQ  131 (412)
T ss_dssp             CCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSC------TTTBCCEEEEEE
T ss_pred             CChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcC------CCCeeeEEEEEe
Confidence            34568999999999999999999999999999999997532    22234667888887764      699999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +.+.+|+||||+ |++|.+++.+.+. .+++..++.++.||+.||+|||++||+||||||+|||+               
T Consensus       132 ~~~~~~lVmE~~~gg~L~~~l~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl---------------  195 (412)
T 2vd5_A          132 DENYLYLVMEYYVGGDLLTLLSKFGE-RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL---------------  195 (412)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHSS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------
T ss_pred             eCCEEEEEEcCCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeee---------------
Confidence            999999999999 9999999987542 59999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhh-------CCCCCCcchhHHHHHHHHHHHhC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVIL-------GLGWSYPCDMWSVGCILVELCTG  286 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~-------~~~~~~~~DiwslG~il~ell~g  286 (399)
                               +.++.+||+|||++......    ....+||+.|+|||++.       ...|+.++|||||||++|||++|
T Consensus       196 ---------d~~g~vkL~DFGla~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG  266 (412)
T 2vd5_A          196 ---------DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYG  266 (412)
T ss_dssp             ---------CTTSCEEECCCTTCEECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHS
T ss_pred             ---------cCCCCEEEeechhheeccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhC
Confidence                     45678999999998764332    23468999999999997       35689999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHh--CCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          287 EALFQTHENLEHLAMMERAL--GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       287 ~~Pf~~~~~~~~~~~i~~~~--~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                      +.||.+.+..+....|....  ..+|.                                               ....++
T Consensus       267 ~~Pf~~~~~~~~~~~i~~~~~~~~~p~-----------------------------------------------~~~~~s  299 (412)
T 2vd5_A          267 QTPFYADSTAETYGKIVHYKEHLSLPL-----------------------------------------------VDEGVP  299 (412)
T ss_dssp             SCTTCCSSHHHHHHHHHTHHHHCCCC---------------------------------------------------CCC
T ss_pred             CCCCCCCCHHHHHHHHHhcccCcCCCc-----------------------------------------------cccCCC
Confidence            99999988887777765421  11111                                               113568


Q ss_pred             hHHHHHHHHccccCCCCC---CCHHHHhCCccccCCC
Q 015867          365 STLTDLLHGLLRYDPSER---LTARQALNHPFFRNLN  398 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R---~t~~ell~hp~f~~~~  398 (399)
                      .++++||.+||. ||.+|   ++++|+++||||++++
T Consensus       300 ~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~  335 (412)
T 2vd5_A          300 EEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLD  335 (412)
T ss_dssp             HHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCC
T ss_pred             HHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCC
Confidence            889999999999 99998   4899999999999874

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.8e-50  Score=384.91  Aligned_cols=259  Identities=27%  Similarity=0.399  Sum_probs=203.6

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..++|++++.||+|+||.||+|++..+++.||||++.........+..|+.+++.+.      ||||+++++++.+.+..
T Consensus        18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~~~~   91 (361)
T 3uc3_A           18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLR------HPNIVRFKEVILTPTHL   91 (361)
T ss_dssp             CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCC------CTTBCCEEEEEECSSEE
T ss_pred             CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCC------CCCCCcEEEEEeeCCEE
Confidence            346899999999999999999999999999999999876655677888999888875      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.+                 
T Consensus        92 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-----------------  152 (361)
T 3uc3_A           92 AIIMEYASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-----------------  152 (361)
T ss_dssp             EEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-----------------
T ss_pred             EEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-----------------
Confidence            9999999 999999998766  59999999999999999999999999999999999999532                 


Q ss_pred             cccCCCCCceEEeecCCcccC--CCCCcccccCCCccchhhhhCCCCCCc-chhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFD--NQNHSSIVSTRHYRAPEVILGLGWSYP-CDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~-~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           ....+||+|||++...  .......+||+.|+|||++.+..++.+ +|||||||++|+|++|+.||.+.+.....
T Consensus       153 -----~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  227 (361)
T 3uc3_A          153 -----PAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDY  227 (361)
T ss_dssp             -----SSCCEEECCCCCC---------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCH
T ss_pred             -----CCceEEEeecCccccccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHH
Confidence                 2445999999998642  233356689999999999998887655 89999999999999999999865432222


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.......                    ...+|                        ....++.++.+||.+||+.||
T Consensus       228 ~~~~~~~~~~--------------------~~~~~------------------------~~~~~s~~~~~li~~~L~~dP  263 (361)
T 3uc3_A          228 RKTIQRILSV--------------------KYSIP------------------------DDIRISPECCHLISRIFVADP  263 (361)
T ss_dssp             HHHHHHHHTT--------------------CCCCC------------------------TTSCCCHHHHHHHHHHSCSCT
T ss_pred             HHHHHHHhcC--------------------CCCCC------------------------CcCCCCHHHHHHHHHHccCCh
Confidence            2111110000                    00011                        112467889999999999999


Q ss_pred             CCCCCHHHHhCCccccC
Q 015867          380 SERLTARQALNHPFFRN  396 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~  396 (399)
                      .+|||+.|+++||||++
T Consensus       264 ~~Rps~~ell~hp~f~~  280 (361)
T 3uc3_A          264 ATRISIPEIKTHSWFLK  280 (361)
T ss_dssp             TTSCCHHHHHTSHHHHT
T ss_pred             hHCcCHHHHHhCcchhc
Confidence            99999999999999954

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.2e-51  Score=386.94  Aligned_cols=253  Identities=27%  Similarity=0.429  Sum_probs=210.2

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ....++|++.+.||+|+||.||+|.+..+++.||||++....    .....+..|+.+++.+.      ||||+++++++
T Consensus         5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~l~~~~   78 (336)
T 3h4j_B            5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR------HPHIIKLYDVI   78 (336)
T ss_dssp             CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCC------CTTBCCEEEEE
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCC------CCCCCeEEEEE
Confidence            344578999999999999999999999999999999997532    12245667777777664      69999999999


Q ss_pred             ccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          138 DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       138 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      .+.+..++||||++++|.+++...+  .+++..++.++.||+.||.|||++||+||||||+|||+               
T Consensus        79 ~~~~~~~lv~E~~~g~l~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll---------------  141 (336)
T 3h4j_B           79 TTPTDIVMVIEYAGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL---------------  141 (336)
T ss_dssp             ECSSEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEE---------------
T ss_pred             EeCCEEEEEEECCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEE---------------
Confidence            9999999999999999999998766  59999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                               +.++.+||+|||++.....  .....+||+.|+|||++.+..+ ++++|||||||++|+|++|..||.+..
T Consensus       142 ---------~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~  212 (336)
T 3h4j_B          142 ---------DDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEF  212 (336)
T ss_dssp             ---------CTTCCEEECCSSCTBTTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSS
T ss_pred             ---------cCCCCEEEEEeccceeccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCcc
Confidence                     4567899999999876433  2356789999999999998876 789999999999999999999997644


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....+                                                  .......++.++.++.+||.+|
T Consensus       213 ~~~~~~~i--------------------------------------------------~~~~~~~p~~~s~~~~~li~~~  242 (336)
T 3h4j_B          213 IPNLFKKV--------------------------------------------------NSCVYVMPDFLSPGAQSLIRRM  242 (336)
T ss_dssp             STTCBCCC--------------------------------------------------CSSCCCCCTTSCHHHHHHHHTT
T ss_pred             HHHHHHHH--------------------------------------------------HcCCCCCcccCCHHHHHHHHHH
Confidence            31111000                                                  0000112245678899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccC
Q 015867          375 LRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |+.||.+|||++|+++||||+.
T Consensus       243 L~~dP~~Rpt~~eil~hp~~~~  264 (336)
T 3h4j_B          243 IVADPMQRITIQEIRRDPWFNV  264 (336)
T ss_dssp             SCSSGGGSCCHHHHTTCHHHHT
T ss_pred             cCCChhHCcCHHHHHhChhhcc
Confidence            9999999999999999999975

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=4.5e-50  Score=398.92  Aligned_cols=271  Identities=27%  Similarity=0.458  Sum_probs=226.5

Q ss_pred             CCCCceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--------------hhhHHHHHHHHHH
Q 015867           51 DREGHYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--------------KYRDAAMIEIDVL  116 (399)
Q Consensus        51 ~~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------------~~~~~~~~e~~~l  116 (399)
                      -..+.+.......+.++|++++.||+|+||+||+|.+..+++.||||++....              .....+..|+.++
T Consensus        21 ~~~~~~~~~~~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l  100 (504)
T 3q5i_A           21 INPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLL  100 (504)
T ss_dssp             CCGGGGCCEECSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHH
T ss_pred             echhheeeccCCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHH
Confidence            33445555666778899999999999999999999999999999999997532              2235567788888


Q ss_pred             HHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 015867          117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDL  195 (399)
Q Consensus       117 ~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Di  195 (399)
                      +.+.      ||||+++++++.+.+..|+||||| |++|.+++....  .+++..+..++.||+.||+|||++||+||||
T Consensus       101 ~~l~------hpniv~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dl  172 (504)
T 3q5i_A          101 KSLD------HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDI  172 (504)
T ss_dssp             HTCC------CTTBCCEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             HhCC------CCCCCeEEEEEEcCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCC
Confidence            8774      699999999999999999999999 899999998765  5999999999999999999999999999999


Q ss_pred             CCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchh
Q 015867          196 KPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDM  273 (399)
Q Consensus       196 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~Di  273 (399)
                      ||+|||++.++                     ....+||+|||++.....  .....+||+.|+|||++.+ .++.++||
T Consensus       173 kp~Nil~~~~~---------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~Di  230 (504)
T 3q5i_A          173 KPENILLENKN---------------------SLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKK-KYNEKCDV  230 (504)
T ss_dssp             SGGGEEESSTT---------------------CCSSEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTT-CBCTHHHH
T ss_pred             cHHHEEEecCC---------------------CCccEEEEECCCCEEcCCCCccccccCCcCCCCHHHhcc-CCCchHHH
Confidence            99999995432                     234799999999876443  2345689999999999874 69999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhh
Q 015867          274 WSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK  353 (399)
Q Consensus       274 wslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  353 (399)
                      |||||++|+|++|.+||.+.+..+.+..+......++...                                        
T Consensus       231 wslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~----------------------------------------  270 (504)
T 3q5i_A          231 WSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFND----------------------------------------  270 (504)
T ss_dssp             HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHH----------------------------------------
T ss_pred             HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccc----------------------------------------
Confidence            9999999999999999999888888887766544333221                                        


Q ss_pred             hhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       354 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                            +..++.++.+||.+||+.||.+|||++|+|+||||++.
T Consensus       271 ------~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~  308 (504)
T 3q5i_A          271 ------WKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKY  308 (504)
T ss_dssp             ------HTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHT
T ss_pred             ------cCCCCHHHHHHHHHHcCCChhHCCCHHHHhcCHhhhhc
Confidence                  23567889999999999999999999999999999764

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=4.8e-50  Score=383.82  Aligned_cols=254  Identities=25%  Similarity=0.450  Sum_probs=213.1

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ...++|++++.||+|+||.||+|.+..+++.||+|++....    .....+..|+++++.+.      ||||+++++++.
T Consensus        12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~------hp~Iv~l~~~~~   85 (384)
T 4fr4_A           12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE------HPFLVNLWYSFQ   85 (384)
T ss_dssp             CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC------CTTBCCEEEEEE
T ss_pred             CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCC------CCCCCcEEEEEE
Confidence            34578999999999999999999999999999999997532    22345667888887774      699999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +.+..|+||||+ |++|.+++....  .+++..++.++.||+.||.|||++||+||||||+|||+               
T Consensus        86 ~~~~~~lv~e~~~gg~L~~~l~~~~--~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll---------------  148 (384)
T 4fr4_A           86 DEEDMFMVVDLLLGGDLRYHLQQNV--HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL---------------  148 (384)
T ss_dssp             CSSEEEEEECCCTTEEHHHHHHTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------
T ss_pred             eCCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEE---------------
Confidence            999999999999 999999998765  59999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhC---CCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                               +.++.+||+|||++....  ......+||+.|+|||++.+   ..++.++|||||||++|+|++|..||..
T Consensus       149 ---------~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~  219 (384)
T 4fr4_A          149 ---------DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI  219 (384)
T ss_dssp             ---------CTTSCEEECCCTTCEECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             ---------CCCCCEEEeccceeeeccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCC
Confidence                     456789999999987643  33456789999999999974   4689999999999999999999999975


Q ss_pred             CCc---HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          293 HEN---LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       293 ~~~---~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      ...   .+....+....                                                  ...+..++.++.+
T Consensus       220 ~~~~~~~~~~~~~~~~~--------------------------------------------------~~~p~~~s~~~~~  249 (384)
T 4fr4_A          220 RSSTSSKEIVHTFETTV--------------------------------------------------VTYPSAWSQEMVS  249 (384)
T ss_dssp             CTTSCHHHHHHHHHHCC--------------------------------------------------CCCCTTSCHHHHH
T ss_pred             CCCccHHHHHHHHhhcc--------------------------------------------------cCCCCcCCHHHHH
Confidence            432   22222222111                                                  1122456788999


Q ss_pred             HHHHccccCCCCCCC-HHHHhCCccccCCC
Q 015867          370 LLHGLLRYDPSERLT-ARQALNHPFFRNLN  398 (399)
Q Consensus       370 li~~~L~~dP~~R~t-~~ell~hp~f~~~~  398 (399)
                      ||.+||+.||.+||+ ++++++||||++++
T Consensus       250 li~~lL~~dP~~R~s~~~~l~~hp~f~~~~  279 (384)
T 4fr4_A          250 LLKKLLEPNPDQRFSQLSDVQNFPYMNDIN  279 (384)
T ss_dssp             HHHHHSCSSGGGSCCSHHHHHTSGGGTTCC
T ss_pred             HHHHHhcCCHhHhcccHHHHHcChhhhcCC
Confidence            999999999999998 99999999999874

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=2.3e-50  Score=395.13  Aligned_cols=257  Identities=25%  Similarity=0.434  Sum_probs=210.3

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..++|++++.||+|+||.||+|.+..+++.||||++..........  ...+++++.......||||+.+++++...+.+
T Consensus       146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~--~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~  223 (446)
T 4ejn_A          146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDE--VAHTLTENRVLQNSRHPFLTALKYSFQTHDRL  223 (446)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC---------------CCCCCSCTTSCCEEEEEEETTEE
T ss_pred             ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHH--HHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEE
Confidence            4568999999999999999999999999999999997532111110  11222333333445689999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      |+||||+ +++|.+++....  .+++..++.++.||+.||+|||+ .||+||||||+||||                   
T Consensus       224 ~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll-------------------  282 (446)
T 4ejn_A          224 CFVMEYANGGELFFHLSRER--VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML-------------------  282 (446)
T ss_dssp             EEEECCCSSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEE-------------------
T ss_pred             EEEEeeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEE-------------------
Confidence            9999999 899999998766  69999999999999999999998 999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           +.++.+||+|||++....   ......+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.
T Consensus       283 -----~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  357 (446)
T 4ejn_A          283 -----DKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKL  357 (446)
T ss_dssp             -----CSSSCEEECCCCCCCTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             -----CCCCCEEEccCCCceeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHH
Confidence                 456789999999987532   233567899999999999999999999999999999999999999998887776


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+......+                                                  +..++.++.+||.+||+.|
T Consensus       358 ~~~i~~~~~~~--------------------------------------------------p~~~~~~~~~li~~~L~~d  387 (446)
T 4ejn_A          358 FELILMEEIRF--------------------------------------------------PRTLGPEAKSLLSGLLKKD  387 (446)
T ss_dssp             HHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCC--------------------------------------------------CccCCHHHHHHHHHHcccC
Confidence            66654432221                                                  2345778899999999999


Q ss_pred             CCCCC-----CHHHHhCCccccCCC
Q 015867          379 PSERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~-----t~~ell~hp~f~~~~  398 (399)
                      |.+||     |++|+++||||++++
T Consensus       388 P~~R~~~~~~t~~ell~hp~f~~~~  412 (446)
T 4ejn_A          388 PKQRLGGGSEDAKEIMQHRFFAGIV  412 (446)
T ss_dssp             TTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             HHHhCCCCCCCHHHHHhCccccCCC
Confidence            99999     999999999999874

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=1.4e-49  Score=366.10  Aligned_cols=262  Identities=27%  Similarity=0.433  Sum_probs=223.0

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++....   .....+..|+.+++.+.      |+||+++++++.
T Consensus         2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~   75 (284)
T 3kk8_A            2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ------HPNIVRLHDSIQ   75 (284)
T ss_dssp             CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCC------CTTBCCEEEEEE
T ss_pred             chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcC------CCCcCeEEEEEE
Confidence            456789999999999999999999999999999999996533   23355667888888875      599999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      ..+..++||||+ +++|.+.+....  .+++..+..++.||+.||.|||++||+||||||+|||++.++           
T Consensus        76 ~~~~~~~v~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~-----------  142 (284)
T 3kk8_A           76 EESFHYLVFDLVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKA-----------  142 (284)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSS-----------
T ss_pred             cCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCC-----------
Confidence            999999999999 889999988765  599999999999999999999999999999999999996432           


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                                ....+||+|||++......  .....||+.|+|||++.+..++.++||||||+++|+|++|..||...+.
T Consensus       143 ----------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~  212 (284)
T 3kk8_A          143 ----------KGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ  212 (284)
T ss_dssp             ----------TTCCEEECCCTTCEECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ----------CCCcEEEeeceeeEEcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCch
Confidence                      3456999999998654433  2456799999999999999999999999999999999999999998887


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+....+.......+.                                              .....++.++.+||.+||
T Consensus       213 ~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l  246 (284)
T 3kk8_A          213 HRLYAQIKAGAYDYPS----------------------------------------------PEWDTVTPEAKSLIDSML  246 (284)
T ss_dssp             HHHHHHHHHTCCCCCT----------------------------------------------TTTTTSCHHHHHHHHHHS
T ss_pred             hHHHHHHHhccccCCc----------------------------------------------hhhcccCHHHHHHHHHHc
Confidence            7777666554332221                                              111356788899999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCCC
Q 015867          376 RYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +.||.+|||+.|+++||||++..
T Consensus       247 ~~dp~~Rps~~~~l~h~~~~~~~  269 (284)
T 3kk8_A          247 TVNPKKRITADQALKVPWICNRE  269 (284)
T ss_dssp             CSSTTTSCCHHHHTTSHHHHSCC
T ss_pred             ccChhhCCCHHHHhcCccccCCh
Confidence            99999999999999999998854

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=4.2e-50  Score=385.20  Aligned_cols=259  Identities=27%  Similarity=0.467  Sum_probs=218.6

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+..|+.+++.+      .|+||+++++++.+.+.
T Consensus        49 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l------~hpnIv~~~~~~~~~~~  122 (387)
T 1kob_A           49 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQL------HHPKLINLHDAFEDKYE  122 (387)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC------CSTTBCCEEEEEECSSE
T ss_pred             cccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhC------CCcCCCeEEEEEEeCCE
Confidence            4578999999999999999999999999999999997542 2334566777777766      46999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.                 
T Consensus       123 ~~lv~E~~~gg~L~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~-----------------  184 (387)
T 1kob_A          123 MVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-----------------  184 (387)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTC-CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-----------------
T ss_pred             EEEEEEcCCCCcHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEec-----------------
Confidence            99999999 9999999876532 5999999999999999999999999999999999999953                 


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           +..+.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+.+
T Consensus       185 -----~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~  259 (387)
T 1kob_A          185 -----KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL  259 (387)
T ss_dssp             -----TTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH
T ss_pred             -----CCCCceEEEecccceecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHH
Confidence                 23567999999998764433  24567999999999999999999999999999999999999999988877776


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......++.                                              .....++.++.+||.+||+.||
T Consensus       260 ~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~dP  293 (387)
T 1kob_A          260 QNVKRCDWEFDE----------------------------------------------DAFSSVSPEAKDFIKNLLQKEP  293 (387)
T ss_dssp             HHHHHCCCCCCS----------------------------------------------STTTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHhCCCCCCc----------------------------------------------cccccCCHHHHHHHHHHcCCCh
Confidence            666443221110                                              1123567889999999999999


Q ss_pred             CCCCCHHHHhCCccccCC
Q 015867          380 SERLTARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~  397 (399)
                      .+|||+.|+|+||||++.
T Consensus       294 ~~Rpt~~ell~hp~~~~~  311 (387)
T 1kob_A          294 RKRLTVHDALEHPWLKGD  311 (387)
T ss_dssp             GGSCCHHHHHTSTTTSSC
T ss_pred             hHCcCHHHHhhCccccCC
Confidence            999999999999999864

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=2.3e-50  Score=378.92  Aligned_cols=258  Identities=28%  Similarity=0.504  Sum_probs=195.1

Q ss_pred             cCCCEEEE---eeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKIL---SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~---~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +.++|++.   +.||+|+||.||+|.+..+++.||||++...  .......|+.+++.+.     +||||+++++++.+.
T Consensus         6 f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~l~~l~-----~h~niv~~~~~~~~~   78 (325)
T 3kn6_A            6 FYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR--MEANTQKEITALKLCE-----GHPNIVKLHEVFHDQ   78 (325)
T ss_dssp             HHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG--GHHHHHHHHHHHHHTT-----TCTTBCCEEEEEECS
T ss_pred             chhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh--hhhhHHHHHHHHHHhc-----CCCCeeEEEEEEEcC
Confidence            34568886   7899999999999999999999999999653  3456677888888876     479999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..|+||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++.++             
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~-------------  143 (325)
T 3kn6_A           79 LHTFLVMELLNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEN-------------  143 (325)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHCS--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC---------------
T ss_pred             CEEEEEEEccCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCC-------------
Confidence            9999999999 889999998865  699999999999999999999999999999999999996532             


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc-
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN-  295 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~-  295 (399)
                              .+..+||+|||++.....   .....+||+.|+|||++.+..++.++|||||||++|+|++|..||...+. 
T Consensus       144 --------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  215 (325)
T 3kn6_A          144 --------DNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRS  215 (325)
T ss_dssp             ----------CEEEECCCTTCEECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-----
T ss_pred             --------CcccEEEeccccceecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccc
Confidence                    344799999999875432   23456789999999999999999999999999999999999999976443 


Q ss_pred             ------HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          296 ------LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       296 ------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                            .+....+......++                                              ...+..++.++.+
T Consensus       216 ~~~~~~~~~~~~i~~~~~~~~----------------------------------------------~~~~~~~s~~~~~  249 (325)
T 3kn6_A          216 LTCTSAVEIMKKIKKGDFSFE----------------------------------------------GEAWKNVSQEAKD  249 (325)
T ss_dssp             --CCCHHHHHHHHTTTCCCCC----------------------------------------------SHHHHTSCHHHHH
T ss_pred             cccccHHHHHHHHHcCCCCCC----------------------------------------------cccccCCCHHHHH
Confidence                  222222222111111                                              1112456888999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+||+.||.+|||+.|+++||||++.
T Consensus       250 li~~~L~~dP~~Rpt~~ell~h~w~~~~  277 (325)
T 3kn6_A          250 LIQGLLTVDPNKRLKMSGLRYNEWLQDG  277 (325)
T ss_dssp             HHHHHHCCCTTTCCCTTTSTTCGGGCTT
T ss_pred             HHHHHCCCChhHCCCHHHHhcChhhccC
Confidence            9999999999999999999999999874

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=1.7e-50  Score=380.13  Aligned_cols=274  Identities=26%  Similarity=0.392  Sum_probs=228.0

Q ss_pred             CCceeeccCCccCCCEEEE-eeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCc
Q 015867           53 EGHYVFNLGENLTPRYKIL-SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSS  128 (399)
Q Consensus        53 ~~~~~~~~~~~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~  128 (399)
                      .....+...+.+.++|.+. +.||+|+||.||+|.+..+++.||||++....   .....+..|+.+++.+.     .|+
T Consensus        15 ~~n~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~-----~~~   89 (327)
T 3lm5_A           15 TENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAK-----SCP   89 (327)
T ss_dssp             -CCCCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTT-----TCT
T ss_pred             chhhHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhcc-----CCC
Confidence            3445667777888999998 89999999999999999999999999997532   22456778888888876     368


Q ss_pred             ceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccc
Q 015867          129 HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEF  207 (399)
Q Consensus       129 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~  207 (399)
                      ||+++++++.+.+..++||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||++..  
T Consensus        90 ~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~--  167 (327)
T 3lm5_A           90 RVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI--  167 (327)
T ss_dssp             TBCCEEEEEECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCB--
T ss_pred             CEEEEEEEEEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecC--
Confidence            9999999999999999999999 8899999876544579999999999999999999999999999999999999532  


Q ss_pred             ccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 015867          208 IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  285 (399)
                                         ..++.+||+|||++......  .....||+.|+|||++.+..++.++||||||+++|+|++
T Consensus       168 -------------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~  228 (327)
T 3lm5_A          168 -------------------YPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT  228 (327)
T ss_dssp             -------------------TTBCCEEECCGGGCEEC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             -------------------CCCCcEEEeeCccccccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHh
Confidence                               12578999999998764432  345679999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |..||.+.+..+....+......++.                                              .....++.
T Consensus       229 g~~pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~  262 (327)
T 3lm5_A          229 HTSPFVGEDNQETYLNISQVNVDYSE----------------------------------------------ETFSSVSQ  262 (327)
T ss_dssp             SSCSSCCSSHHHHHHHHHHTCCCCCT----------------------------------------------TTTTTSCH
T ss_pred             CCCCCCCCCchHHHHHHHhcccccCc----------------------------------------------hhhcccCH
Confidence            99999998887777766654333221                                              11235678


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .+.+||.+||+.||.+|||++++|+||||++++
T Consensus       263 ~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~  295 (327)
T 3lm5_A          263 LATDFIQSLLVKNPEKRPTAEICLSHSWLQQWD  295 (327)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCC
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhCCHhhcccc
Confidence            889999999999999999999999999999863

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=1e-49  Score=373.86  Aligned_cols=263  Identities=27%  Similarity=0.486  Sum_probs=223.5

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-------hhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+|+.||||++.....       ....+..|+.+++.+.      ||||++++
T Consensus         8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~   81 (321)
T 2a2a_A            8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL------HHNVITLH   81 (321)
T ss_dssp             SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCC------CTTBCCEE
T ss_pred             hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCC------CCCcceEE
Confidence            4556789999999999999999999999999999999975321       2456778999998885      59999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      +++.+.+..++||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++       
T Consensus        82 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~-------  152 (321)
T 2a2a_A           82 DVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKN-------  152 (321)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHTCS--CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTT-------
T ss_pred             EEEecCCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCC-------
Confidence            9999999999999999 899999998765  699999999999999999999999999999999999995432       


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                   .....++|+|||++.....  ......||+.|+|||++.+..++.++||||||+++|+|++|..||.
T Consensus       153 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~  219 (321)
T 2a2a_A          153 -------------IPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  219 (321)
T ss_dssp             -------------SSSCCEEECCCTTCEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSC
T ss_pred             -------------CCcCCEEEccCccceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCC
Confidence                         1123799999999876433  2345679999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+....+......++...                                              ...++..+.+||
T Consensus       220 ~~~~~~~~~~i~~~~~~~~~~~----------------------------------------------~~~~~~~~~~li  253 (321)
T 2a2a_A          220 GDTKQETLANITSVSYDFDEEF----------------------------------------------FSHTSELAKDFI  253 (321)
T ss_dssp             CSSHHHHHHHHHTTCCCCCHHH----------------------------------------------HTTCCHHHHHHH
T ss_pred             CCCHHHHHHHHHhcccccChhh----------------------------------------------hcccCHHHHHHH
Confidence            8887777766655433333221                                              134577889999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccCCC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .+||+.||.+|||+.|+++||||++++
T Consensus       254 ~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          254 RKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             HTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             HHHcCCChhhCcCHHHHhcCccccCCC
Confidence            999999999999999999999999864

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=4.1e-50  Score=380.80  Aligned_cols=262  Identities=28%  Similarity=0.453  Sum_probs=205.6

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .+.+.++|++.+.||+|+||.||+|.+..+++.||||+++... ....+..|+++++.+.      |+||+++++++.+.
T Consensus        48 ~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~  120 (349)
T 2w4o_A           48 RDALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV-DKKIVRTEIGVLLRLS------HPNIIKLKEIFETP  120 (349)
T ss_dssp             CSCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-----------CHHHHHCC------CTTBCCEEEEEECS
T ss_pred             cccccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch-hHHHHHHHHHHHHhCC------CCCCcceeeeEecC
Confidence            3556788999999999999999999999999999999997543 3455677888888885      59999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||++..              
T Consensus       121 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~--------------  184 (349)
T 2w4o_A          121 TEISLVLELVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP--------------  184 (349)
T ss_dssp             SEEEEEECCCCSCBHHHHHTTCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSS--------------
T ss_pred             CeEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecC--------------
Confidence            9999999999 899999998765  59999999999999999999999999999999999999532              


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                             +.++.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||......+
T Consensus       185 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  257 (349)
T 2w4o_A          185 -------APDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQ  257 (349)
T ss_dssp             -------STTCCEEECCCC----------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHH
T ss_pred             -------CCCCCEEEccCccccccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccH
Confidence                   24678999999998764332  345679999999999999999999999999999999999999998766544


Q ss_pred             -HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          298 -HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       298 -~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                       ....+......++                                              ....+.++.++.+||.+||+
T Consensus       258 ~~~~~i~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~~L~  291 (349)
T 2w4o_A          258 FMFRRILNCEYYFI----------------------------------------------SPWWDEVSLNAKDLVRKLIV  291 (349)
T ss_dssp             HHHHHHHTTCCCCC----------------------------------------------TTTTTTSCHHHHHHHHTTSC
T ss_pred             HHHHHHHhCCCccC----------------------------------------------CchhhhCCHHHHHHHHHHcc
Confidence             3333322111110                                              11224567889999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCCC
Q 015867          377 YDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .||.+|||+.|+|+||||++..
T Consensus       292 ~dP~~Rpt~~e~l~hp~~~~~~  313 (349)
T 2w4o_A          292 LDPKKRLTTFQALQHPWVTGKA  313 (349)
T ss_dssp             SSGGGSCCHHHHHHSTTTTSTT
T ss_pred             CChhhCcCHHHHhcCcccCCCc
Confidence            9999999999999999998753

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.7e-49  Score=379.72  Aligned_cols=280  Identities=29%  Similarity=0.532  Sum_probs=226.3

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +.++|.+.+.||+|+||.||+|.+..+|+.||||++...   ......+..|+.+++.+.      |+||+++++++...
T Consensus        40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~  113 (371)
T 4exu_A           40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ------HENVIGLLDVFTPA  113 (371)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCC------CTTBCCCSEEECSC
T ss_pred             ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcC------CCCchhhhhheecc
Confidence            568999999999999999999999999999999999653   223456677888888875      59999999999876


Q ss_pred             CeE------EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          141 NHI------CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       141 ~~~------~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      +..      |+||||++++|.+++..    .+++..+..++.||+.||+|||++||+||||||+|||+            
T Consensus       114 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll------------  177 (371)
T 4exu_A          114 SSLRNFYDFYLVMPFMQTDLQKIMGM----EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV------------  177 (371)
T ss_dssp             SSSTTCCCCEEEEECCCEEHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE------------
T ss_pred             CCcccceeEEEEEccccccHHHHhhc----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEE------------
Confidence            654      99999998899887732    49999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                  +.++.+||+|||++..........+||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus       178 ------------~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  245 (371)
T 4exu_A          178 ------------NEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  245 (371)
T ss_dssp             ------------CTTCCEEECSTTCC--------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             ------------CCCCCEEEEecCcccccccCcCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCC
Confidence                        45677999999999877776777889999999999987 68999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhh-hhhhhhhccchhhhhHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD-RLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      +..+.+..+....+.++..++..........+                    ..... ..........+.++.++.+||.
T Consensus       246 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~li~  305 (371)
T 4exu_A          246 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSY--------------------IQSLPQTPRKDFTQLFPRASPQAADLLE  305 (371)
T ss_dssp             SHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHH--------------------HHHSCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred             ChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhh--------------------hhccCCCcchhHHHhccccChHHHHHHH
Confidence            99999999999999888876554322111100                    00000 0000111223567889999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||+.||.+|||++|+|+||||+.+
T Consensus       306 ~~L~~dP~~Rpt~~ell~hp~f~~~  330 (371)
T 4exu_A          306 KMLELDVDKRLTAAQALTHPFFEPF  330 (371)
T ss_dssp             HHSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HHCCCChhhcCCHHHHhcCcccccC
Confidence            9999999999999999999999976

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=6.1e-50  Score=409.49  Aligned_cols=253  Identities=23%  Similarity=0.401  Sum_probs=219.1

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++++.||+|+||.||+|++..+++.||||++++..    ........|..++..+.     .|++|+.+++++++.
T Consensus       340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~-----~~~~i~~l~~~~~~~  414 (674)
T 3pfq_A          340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPG-----KPPFLTQLHSCFQTM  414 (674)
T ss_dssp             CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTT-----CCTTBCCEEEECBCS
T ss_pred             ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhcc-----CCCeEEEEEEEEEeC
Confidence            467999999999999999999999999999999997532    22334555666665553     579999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+||||||+ |++|.+++...+  .+++..++.|+.||+.||+|||++|||||||||+||||                 
T Consensus       415 ~~~~lV~E~~~gg~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl-----------------  475 (674)
T 3pfq_A          415 DRLYFVMEYVNGGDLMYHIQQVG--RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML-----------------  475 (674)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEE-----------------
T ss_pred             CEEEEEEeCcCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEE-----------------
Confidence            9999999999 999999998866  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                             +.++.+||+|||++...   .....+.+||+.|+|||++.+..|+.++|||||||++|||++|.+||.+.+..
T Consensus       476 -------~~~g~ikL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~  548 (674)
T 3pfq_A          476 -------DSEGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED  548 (674)
T ss_dssp             -------CSSSCEEECCCTTCEECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             -------cCCCcEEEeecceeeccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHH
Confidence                   45678999999998752   33345678999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....|......+|                                                  ..++.++.+||.+||+
T Consensus       549 ~~~~~i~~~~~~~p--------------------------------------------------~~~s~~~~~li~~lL~  578 (674)
T 3pfq_A          549 ELFQSIMEHNVAYP--------------------------------------------------KSMSKEAVAICKGLMT  578 (674)
T ss_dssp             HHHHHHHSSCCCCC--------------------------------------------------TTSCHHHHHHHHHHSC
T ss_pred             HHHHHHHhCCCCCC--------------------------------------------------ccCCHHHHHHHHHHcc
Confidence            87777754322222                                                  3567889999999999


Q ss_pred             cCCCCCCCH-----HHHhCCccccCCC
Q 015867          377 YDPSERLTA-----RQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t~-----~ell~hp~f~~~~  398 (399)
                      .||.+||++     +||++||||++++
T Consensus       579 ~dP~~R~~~~~~~~~ei~~h~ff~~i~  605 (674)
T 3pfq_A          579 KHPGKRLGCGPEGERDIKEHAFFRYID  605 (674)
T ss_dssp             SSSTTCTTCSTTHHHHHHSSGGGSSCC
T ss_pred             CCHHHCCCCCCCcHHHHhcCccccCCC
Confidence            999999997     9999999999875

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=8.2e-50  Score=383.61  Aligned_cols=282  Identities=28%  Similarity=0.535  Sum_probs=225.4

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec----
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD----  138 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~----  138 (399)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++....   .....|+++++.+.      |+||+++++++.    
T Consensus         4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~---~~~~~E~~il~~l~------hpnIv~l~~~~~~~~~   74 (383)
T 3eb0_A            4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP---RYKNRELDIMKVLD------HVNIIKLVDYFYTTGD   74 (383)
T ss_dssp             --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHTTCC------CTTBCCEEEEEEEC--
T ss_pred             cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc---chHHHHHHHHHHcC------CCCccchhheeeecCc
Confidence            34568999999999999999999999999999999986543   22345888887774      699999999883    


Q ss_pred             ----------------------------------cCCeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHH
Q 015867          139 ----------------------------------YRNHICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESV  182 (399)
Q Consensus       139 ----------------------------------~~~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~L  182 (399)
                                                        ...+.++||||++++|.+.+..  .....+++..++.++.||+.||
T Consensus        75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL  154 (383)
T 3eb0_A           75 EEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV  154 (383)
T ss_dssp             -----------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence                                              3345899999998898887764  2233699999999999999999


Q ss_pred             HHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccC--CCCCcccccCCCccchh
Q 015867          183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD--NQNHSSIVSTRHYRAPE  260 (399)
Q Consensus       183 ~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~--~~~~~~~~gt~~y~aPE  260 (399)
                      .|||++||+||||||+|||++.                       .++.+||+|||++...  ........||+.|+|||
T Consensus       155 ~~LH~~gi~H~Dikp~Nil~~~-----------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE  211 (383)
T 3eb0_A          155 GFIHSLGICHRDIKPQNLLVNS-----------------------KDNTLKLCDFGSAKKLIPSEPSVAYICSRFYRAPE  211 (383)
T ss_dssp             HHHHTTTEECSCCCGGGEEEET-----------------------TTTEEEECCCTTCEECCTTSCCCCCCCCSSCCCHH
T ss_pred             HHHHHCcCccCccCHHHEEEcC-----------------------CCCcEEEEECCCCcccCCCCCCcCcccCCCccCHH
Confidence            9999999999999999999942                       3568999999998753  23345668999999999


Q ss_pred             hhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccc
Q 015867          261 VILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVS  339 (399)
Q Consensus       261 ~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  339 (399)
                      ++.+. .++.++|||||||++|+|++|+.||.+.+..+.+..+.+..+.++...+.........       ..+|...  
T Consensus       212 ~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~-------~~~~~~~--  282 (383)
T 3eb0_A          212 LMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTE-------VRFPTLK--  282 (383)
T ss_dssp             HHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC---------CCCCCCC--
T ss_pred             HhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCccccc-------ccCCccC--
Confidence            99875 4999999999999999999999999999999999999999999888766654322111       1111100  


Q ss_pred             hHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          340 RESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                                  ...+....+..++.++.+||.+||+.||.+|||+.|+|+||||+++
T Consensus       283 ------------~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          283 ------------AKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             ------------CCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             ------------cccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence                        0011122335678889999999999999999999999999999864

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=2.6e-49  Score=377.53  Aligned_cols=281  Identities=30%  Similarity=0.538  Sum_probs=227.9

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC--
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR--  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~--  140 (399)
                      .++|++++.||+|+||.||+|.+..+++.||||++....  .....+..|+++++.+.      |+||+++++++...  
T Consensus        26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~   99 (364)
T 3qyz_A           26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR------HENIIGINDIIRAPTI   99 (364)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCC------CTTBCCCCEEECCSST
T ss_pred             cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcC------CCCCccceeEEecCCc
Confidence            468999999999999999999999999999999997432  23356778888988885      59999999998654  


Q ss_pred             ---CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          141 ---NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       141 ---~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                         ...|+||||++++|.+++....   +++..+..++.||+.||+|||++||+||||||+|||+               
T Consensus       100 ~~~~~~~iv~e~~~~~L~~~l~~~~---~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~---------------  161 (364)
T 3qyz_A          100 EQMKDVYIVQDLMETDLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL---------------  161 (364)
T ss_dssp             TTCCCEEEEEECCSEEHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---------------
T ss_pred             cccceEEEEEcccCcCHHHHHHhCC---CCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEE---------------
Confidence               4789999999889999998754   9999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                               +.++.+||+|||++......      ....+||+.|+|||++.+ ..++.++|||||||++|+|++|+.||
T Consensus       162 ---------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf  232 (364)
T 3qyz_A          162 ---------NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF  232 (364)
T ss_dssp             ---------CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             ---------CCCCCEEEEeCcceEecCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCC
Confidence                     45667999999998654322      245589999999998765 45899999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .+.+..+.+..+....+.++...+..........+..    ..|.               ..........+.++.++.+|
T Consensus       233 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------~~~~~~~~~~~~~~~~~~~l  293 (364)
T 3qyz_A          233 PGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLL----SLPH---------------KNKVPWNRLFPNADSKALDL  293 (364)
T ss_dssp             CCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHH----TSCC---------------CCCCCHHHHCTTSCHHHHHH
T ss_pred             CCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHH----hcCC---------------ccCCCHHHhCCCCCHHHHHH
Confidence            9999999999999999988877655432111100000    0000               00000112235678889999


Q ss_pred             HHHccccCCCCCCCHHHHhCCccccCC
Q 015867          371 LHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      |.+||+.||.+|||+.|+|+||||++.
T Consensus       294 i~~~L~~dP~~R~t~~e~l~hp~~~~~  320 (364)
T 3qyz_A          294 LDKMLTFNPHKRIEVEQALAHPYLEQY  320 (364)
T ss_dssp             HHHHTCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHcCCChhhCCCHHHHhcCcchhhc
Confidence            999999999999999999999999975

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=1.2e-49  Score=383.25  Aligned_cols=300  Identities=18%  Similarity=0.205  Sum_probs=212.9

Q ss_pred             CCCEEEEeeeccc--cceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           65 TPRYKILSKMGEG--TFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G--~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .++|++.+.||+|  +||.||+|++..+++.||||++....   .....+..|+.+++.+.      ||||+++++++.+
T Consensus        24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~   97 (389)
T 3gni_B           24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFN------HPNIVPYRATFIA   97 (389)
T ss_dssp             GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCC------CTTBCCEEEEEEE
T ss_pred             CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCC------CCCCCcEeEEEEE
Confidence            3579999999999  99999999999999999999997543   23355667888888875      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..|+||||+ +++|.+++.......+++..++.++.||+.||+|||++||+||||||+|||+                
T Consensus        98 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll----------------  161 (389)
T 3gni_B           98 DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILI----------------  161 (389)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----------------
T ss_pred             CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----------------
Confidence            99999999999 9999999988755579999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccC----------CCCCcccccCCCccchhhhhC--CCCCCcchhHHHHHHHHHHHhC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFD----------NQNHSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTG  286 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~----------~~~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g  286 (399)
                              +.++.+||+|||.+...          .......+||+.|+|||++.+  ..++.++|||||||++|+|++|
T Consensus       162 --------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g  233 (389)
T 3gni_B          162 --------SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG  233 (389)
T ss_dssp             --------CTTCCEEECCGGGCEECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHS
T ss_pred             --------cCCCCEEEcccccceeeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHC
Confidence                    45678999999976431          112234578999999999987  5799999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       287 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      +.||.+.+..+....+.....+  ..+ .....................+. ........................++.+
T Consensus       234 ~~pf~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~  309 (389)
T 3gni_B          234 HVPFKDMPATQMLLEKLNGTVP--CLL-DTSTIPAEELTMSPSRSVANSGL-SDSLTTSTPRPSNGDSPSHPYHRTFSPH  309 (389)
T ss_dssp             SCTTTTCCSTTHHHHC------------------------------------------------------------CCHH
T ss_pred             CCCCCCCCHHHHHHHHhcCCCC--ccc-ccccccccccccccccccccccc-ccccccCccccccCCCCCCccccccCHH
Confidence            9999887666555444332111  000 00000000000000000000000 0000000000001111122345677899


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +.+||.+||+.||.+|||+.|+|+||||+++.
T Consensus       310 ~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~  341 (389)
T 3gni_B          310 FHHFVEQCLQRNPDARPSASTLLNHSFFKQIK  341 (389)
T ss_dssp             HHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred             HHHHHHHHhhcCcccCCCHHHHhcCHHHHHHh
Confidence            99999999999999999999999999999864

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=7.2e-50  Score=373.23  Aligned_cols=259  Identities=25%  Similarity=0.348  Sum_probs=205.6

Q ss_pred             eeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceee
Q 015867           56 YVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQ  132 (399)
Q Consensus        56 ~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~  132 (399)
                      .+...+..+.++|++.++||+|+||+||+|.+..+++.||||++.....   .......|...+..+     ..|+||++
T Consensus        47 ~p~~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~-----~~h~~iv~  121 (311)
T 3p1a_A           47 DPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKV-----GQHPCCVR  121 (311)
T ss_dssp             CTTSSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHH-----CCCTTBCC
T ss_pred             CCCCccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHh-----cCCCcEEE
Confidence            3444556677889999999999999999999999999999999864322   222233344443333     25799999


Q ss_pred             eceeeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          133 IRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       133 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      +++++.+.+..|+||||++++|.+++...+. .+++..++.++.||+.||+|||++||+||||||+|||++         
T Consensus       122 l~~~~~~~~~~~lv~e~~~~~L~~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---------  191 (311)
T 3p1a_A          122 LEQAWEEGGILYLQTELCGPSLQQHCEAWGA-SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG---------  191 (311)
T ss_dssp             EEEEEEETTEEEEEEECCCCBHHHHHHHHCS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---------
T ss_pred             EEEEEEeCCEEEEEEeccCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---------
Confidence            9999999999999999999999999877643 699999999999999999999999999999999999994         


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                                     .++.+||+|||++......  .....||+.|+|||++.+ .++.++|||||||++|+|++|..||
T Consensus       192 ---------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~  255 (311)
T 3p1a_A          192 ---------------PRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELP  255 (311)
T ss_dssp             ---------------GGGCEEECCCTTCEECC------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCC
T ss_pred             ---------------CCCCEEEccceeeeecccCCCCcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCC
Confidence                           4667999999998764332  244569999999999887 7999999999999999999997766


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .....   ...+..  ...+.                                              .....++.++.+|
T Consensus       256 ~~~~~---~~~~~~--~~~~~----------------------------------------------~~~~~~~~~l~~l  284 (311)
T 3p1a_A          256 HGGEG---WQQLRQ--GYLPP----------------------------------------------EFTAGLSSELRSV  284 (311)
T ss_dssp             SSHHH---HHHHTT--TCCCH----------------------------------------------HHHTTSCHHHHHH
T ss_pred             CCccH---HHHHhc--cCCCc----------------------------------------------ccccCCCHHHHHH
Confidence            54222   111111  01111                                              1124567889999


Q ss_pred             HHHccccCCCCCCCHHHHhCCccccC
Q 015867          371 LHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |.+||+.||.+|||+.|+|+||||++
T Consensus       285 i~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          285 LVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHcCCChhhCcCHHHHHhCccccC
Confidence            99999999999999999999999986

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=4.5e-50  Score=376.55  Aligned_cols=256  Identities=25%  Similarity=0.382  Sum_probs=209.5

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++....  .....+..|+.+++.+.      |+||+++++++.+.
T Consensus         4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~~~~~~~~~   77 (323)
T 3tki_A            4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN------HENVVKFYGHRREG   77 (323)
T ss_dssp             TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCC------CTTBCCEEEEEECS
T ss_pred             cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCC------CCCCCeEEEEEecC
Confidence            45678999999999999999999999999999999986432  22355777888888875      59999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..|+||||+ +++|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+                 
T Consensus        78 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll-----------------  138 (323)
T 3tki_A           78 NIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL-----------------  138 (323)
T ss_dssp             SEEEEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE-----------------
T ss_pred             CeEEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEE-----------------
Confidence            9999999999 889999987655  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCC-----CCCcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDN-----QNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                             +.++.+||+|||++....     ......+||+.|+|||++.+..+ +.++|||||||++|+|++|..||...
T Consensus       139 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~  211 (323)
T 3tki_A          139 -------DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQP  211 (323)
T ss_dssp             -------CTTCCEEECCCTTCEECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSS
T ss_pred             -------eCCCCEEEEEeeccceeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCC
Confidence                   456779999999986432     12245689999999999988775 78899999999999999999999865


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +.............                                               ........++..+.+||.+
T Consensus       212 ~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~li~~  244 (323)
T 3tki_A          212 SDSCQEYSDWKEKK-----------------------------------------------TYLNPWKKIDSAPLALLHK  244 (323)
T ss_dssp             CTTSHHHHHHHTTC-----------------------------------------------TTSTTGGGSCHHHHHHHHH
T ss_pred             chHHHHHHHHhccc-----------------------------------------------ccCCccccCCHHHHHHHHH
Confidence            54222111111000                                               0001124567888999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||+.||.+|||+.|+++||||++.
T Consensus       245 ~L~~dP~~R~t~~eil~h~~~~~~  268 (323)
T 3tki_A          245 ILVENPSARITIPDIKKDRWYNKP  268 (323)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             HccCChhhCcCHHHHhhChhhccc
Confidence            999999999999999999999863

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=1.6e-49  Score=385.95  Aligned_cols=280  Identities=28%  Similarity=0.492  Sum_probs=224.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-----
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-----  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-----  139 (399)
                      ..+|++.+.||+|+||.||+|++..+++.||||++....   .....|+++++.+.      |+||+++++++..     
T Consensus        53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~E~~il~~l~------hpniv~l~~~~~~~~~~~  123 (420)
T 1j1b_A           53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLD------HCNIVRLRYFFYSSGEKK  123 (420)
T ss_dssp             EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT---TSCCHHHHHHHTCC------CTTBCCEEEEEEEEETTT
T ss_pred             cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc---hhHHHHHHHHHHcC------CCCccceeeEEeccCCCC
Confidence            346999999999999999999999999999999986532   22346888888875      5999999988743     


Q ss_pred             -CCeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          140 -RNHICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       140 -~~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                       ..++++||||+.++|.+++..  .....+++..++.++.||+.||+|||++||+||||||+||||+.            
T Consensus       124 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~------------  191 (420)
T 1j1b_A          124 DEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP------------  191 (420)
T ss_dssp             TEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEET------------
T ss_pred             cceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeC------------
Confidence             235789999997788877753  22336999999999999999999999999999999999999953            


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                 ..+.+||+|||++....  ......+||+.|+|||++.+. .++.++|||||||++|||++|+.||.+.
T Consensus       192 -----------~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~  260 (420)
T 1j1b_A          192 -----------DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGD  260 (420)
T ss_dssp             -----------TTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             -----------CCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCC
Confidence                       24568999999987532  233456899999999999875 7999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+.+..+.+..+.++...+.........       ..+|....              ..+.....+.++.++.+||.+
T Consensus       261 ~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~-------~~~p~~~~--------------~~~~~~~~~~~~~~~~~Li~~  319 (420)
T 1j1b_A          261 SGVDQLVEIIKVLGTPTREQIREMNPNYTE-------FKFPQIKA--------------HPWTKVFRPRTPPEAIALCSR  319 (420)
T ss_dssp             SHHHHHHHHHHHHCSCCHHHHHHHCSCCCC-------CCCCCCCC--------------CCHHHHSCTTSCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCCHHHHHhhChhhhh-------hccCccCC--------------CCHHHhcCCCCCHHHHHHHHH
Confidence            999999999999998887776654322111       11111000              001112234567889999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||+.||.+|||+.|+++||||+++
T Consensus       320 ~L~~dP~~R~t~~e~l~hp~f~~~  343 (420)
T 1j1b_A          320 LLEYTPTARLTPLEACAHSFFDEL  343 (420)
T ss_dssp             HSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred             hccCChhHCCCHHHHhCCHhhccc
Confidence            999999999999999999999876

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=6.2e-50  Score=382.75  Aligned_cols=259  Identities=29%  Similarity=0.451  Sum_probs=212.3

Q ss_pred             cCCCEEE--EeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKI--LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~--~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +...|.+  .+.||+|+||.||+|.+..+|+.||+|+++... .....+..|+++++.+      .|+||+++++++.+.
T Consensus        85 ~~~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~hpnIv~~~~~~~~~  158 (373)
T 2x4f_A           85 VNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL------DHANLIQLYDAFESK  158 (373)
T ss_dssp             GGGTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTC------CCTTBCCEEEEEECS
T ss_pred             cccceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhC------CCCCCCeEEEEEEEC
Confidence            3445655  678999999999999999999999999997533 3345567788777776      469999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||+..+              
T Consensus       159 ~~~~lv~E~~~~~~L~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~--------------  223 (373)
T 2x4f_A          159 NDIVLVMEYVDGGELFDRIIDESY-NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR--------------  223 (373)
T ss_dssp             SEEEEEEECCTTCEEHHHHHHTGG-GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEET--------------
T ss_pred             CEEEEEEeCCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecC--------------
Confidence            9999999999 8999998876432 58999999999999999999999999999999999999542              


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                              .++.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+..+
T Consensus       224 --------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~  295 (373)
T 2x4f_A          224 --------DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAE  295 (373)
T ss_dssp             --------TTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             --------CCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence                    3567999999998764332  344579999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      .+..+......++.                                              ...+.++.++.+||.+||+.
T Consensus       296 ~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~L~~  329 (373)
T 2x4f_A          296 TLNNILACRWDLED----------------------------------------------EEFQDISEEAKEFISKLLIK  329 (373)
T ss_dssp             HHHHHHHTCCCSCS----------------------------------------------GGGTTSCHHHHHHHHTTSCS
T ss_pred             HHHHHHhccCCCCh----------------------------------------------hhhccCCHHHHHHHHHHcCC
Confidence            77776554322211                                              11235678899999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|||+.|+|+||||++.
T Consensus       330 dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          330 EKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             SGGGSCCHHHHHHSHHHHCH
T ss_pred             ChhhCCCHHHHhcCcCcCCC
Confidence            99999999999999999874

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=1.5e-49  Score=380.22  Aligned_cols=301  Identities=27%  Similarity=0.457  Sum_probs=222.9

Q ss_pred             ceeeccCC---ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCc
Q 015867           55 HYVFNLGE---NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSS  128 (399)
Q Consensus        55 ~~~~~~~~---~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~  128 (399)
                      .+.+..++   .+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+..|+.+++.+.      ||
T Consensus        11 ~~~~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------hp   84 (371)
T 2xrw_A           11 FYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HK   84 (371)
T ss_dssp             EEEEEETTEEEEEETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCC------CT
T ss_pred             ceEeecCCcccchhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcC------CC
Confidence            34455555   3467899999999999999999999999999999999753   223355667888888774      59


Q ss_pred             ceeeeceeeccCC------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE
Q 015867          129 HCVQIRNWFDYRN------HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL  202 (399)
Q Consensus       129 ~iv~~~~~~~~~~------~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll  202 (399)
                      ||+++++++...+      ..|+||||++++|.+++..    .+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus        85 niv~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~  160 (371)
T 2xrw_A           85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  160 (371)
T ss_dssp             TBCCEEEEECSCCSTTTCCEEEEEEECCSEEHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             CccceEEeeccccccccccceEEEEEcCCCCHHHHHhh----ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEE
Confidence            9999999987654      7899999998899998863    48999999999999999999999999999999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHH
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  280 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  280 (399)
                                              +.++.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++
T Consensus       161 ------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  216 (371)
T 2xrw_A          161 ------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM  216 (371)
T ss_dssp             ------------------------CTTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred             ------------------------cCCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHH
Confidence                                    44678999999998764432  3456899999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccc
Q 015867          281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV  360 (399)
Q Consensus       281 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (399)
                      |+|++|..||.+.+..+.+..+.+..+.+++.++.........+.....  .+....     ..... ............
T Consensus       217 ~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~-~~~~~~~~~~~~  288 (371)
T 2xrw_A          217 GEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRP--KYAGYS-----FEKLF-PDVLFPADSEHN  288 (371)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSC--CCCCCC-----HHHHS-CGGGSCCSSHHH
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCc--cccccc-----hhhhc-ccccCccccccc
Confidence            9999999999999999999999888887777665443222111111110  000000     00000 000000011122


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       361 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ...+.++.+||.+||+.||.+|||++|+|+||||+..
T Consensus       289 ~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          289 KLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             HHHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             ccccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence            3457789999999999999999999999999999864

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=8.4e-49  Score=368.04  Aligned_cols=285  Identities=29%  Similarity=0.515  Sum_probs=228.3

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEc-cCCeEEEEEEEecchh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec-
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDR-QTQERVAIKVVRSIRK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD-  138 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~-~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~-  138 (399)
                      ..++|++.+.||+|+||.||+|++. .+++.||||+++....   ....+..|+.+++.+..   ..||||+++++++. 
T Consensus         9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~---~~h~~i~~~~~~~~~   85 (326)
T 1blx_A            9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET---FEHPNVVRLFDVCTV   85 (326)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHH---TCCTTBCCEEEEEEE
T ss_pred             chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhc---cCCCCeEeeeeeeee
Confidence            4578999999999999999999985 6789999999864322   22356678888888754   24799999999886 


Q ss_pred             ----cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          139 ----YRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       139 ----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                          .....++||||++++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||+            
T Consensus        86 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili------------  153 (326)
T 1blx_A           86 SRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV------------  153 (326)
T ss_dssp             EECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE------------
T ss_pred             cccCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEE------------
Confidence                5678999999998899999988765569999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                  +.++.+||+|||++......  .....||+.|+|||++.+..++.++||||||+++|+|++|..||.+
T Consensus       154 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  221 (326)
T 1blx_A          154 ------------TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRG  221 (326)
T ss_dssp             ------------CTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred             ------------cCCCCEEEecCcccccccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCC
Confidence                        44677999999998764322  2456789999999999999999999999999999999999999999


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+.+..+....+.++...+..........+..                       ..........+.++..+.+||.
T Consensus       222 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~li~  278 (326)
T 1blx_A          222 SSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHS-----------------------KSAQPIEKFVTDIDELGKDLLL  278 (326)
T ss_dssp             SSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCC-----------------------CCCCCGGGTCCSCCHHHHHHHH
T ss_pred             CCHHHHHHHHHHHcCCCCcccCccccccchhhhcc-----------------------cCcchhhhccccCCHHHHHHHH
Confidence            99888888888776665443221110000000000                       0000112233567888999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||+.||.+|||+.|+++||||++++
T Consensus       279 ~~L~~dP~~Rpt~~e~l~hp~~~~~~  304 (326)
T 1blx_A          279 KCLTFNPAKRISAYSALSHPYFQDLE  304 (326)
T ss_dssp             HHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HHcCCCcccCCCHHHHhcCccccccc
Confidence            99999999999999999999999875

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=2.6e-49  Score=363.10  Aligned_cols=258  Identities=28%  Similarity=0.452  Sum_probs=221.8

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .+.++|++.+.||+|+||.||+|.+..++..||+|++.... .....+..|+++++.+.      |+||+++++++.+.+
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~   79 (277)
T 3f3z_A            6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD------HPNIIRLYETFEDNT   79 (277)
T ss_dssp             CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCC------CTTBCCEEEEEECSS
T ss_pred             hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCC------CCCEeeEEEEEecCC
Confidence            45578999999999999999999999999999999987532 33456778888888874      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||+..+               
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~---------------  142 (277)
T 3f3z_A           80 DIYLVMELCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD---------------  142 (277)
T ss_dssp             EEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS---------------
T ss_pred             eEEEEEeccCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecC---------------
Confidence            999999999 889999998766  59999999999999999999999999999999999999542               


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                            +.++.++|+|||++.....  ......||+.|+|||++.+. ++.++||||||+++|+|++|..||...+..+.
T Consensus       143 ------~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  215 (277)
T 3f3z_A          143 ------SPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEV  215 (277)
T ss_dssp             ------STTCCEEECCCTTCEECCTTSCBCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ------CCCCcEEEEecccceeccCccchhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHH
Confidence                  3567899999999865432  33456799999999998765 89999999999999999999999999888887


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+......+|...                                              ...++.++.+||.+||+.|
T Consensus       216 ~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~li~~~l~~d  249 (277)
T 3f3z_A          216 MLKIREGTFTFPEKD----------------------------------------------WLNVSPQAESLIRRLLTKS  249 (277)
T ss_dssp             HHHHHHCCCCCCHHH----------------------------------------------HTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhCCCCCCchh----------------------------------------------hhcCCHHHHHHHHHHccCC
Confidence            777766554444321                                              1245778899999999999


Q ss_pred             CCCCCCHHHHhCCccccC
Q 015867          379 PSERLTARQALNHPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~  396 (399)
                      |.+|||+.++|+||||++
T Consensus       250 p~~R~s~~~~l~h~~~~~  267 (277)
T 3f3z_A          250 PKQRITSLQALEHEWFEK  267 (277)
T ss_dssp             TTTSCCHHHHTTSHHHHH
T ss_pred             hhhCcCHHHHhcCHHHhc
Confidence            999999999999999976

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=1.7e-49  Score=395.57  Aligned_cols=256  Identities=27%  Similarity=0.449  Sum_probs=216.4

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ...++|++.+.||+|+||.||+|.+..+|+.||||++....    .....+..|.++++.+.      |+||+++++++.
T Consensus       181 ~~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~------hp~Iv~l~~~~~  254 (576)
T 2acx_A          181 VTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVN------SRFVVSLAYAYE  254 (576)
T ss_dssp             CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC------CTTBCCEEEEEE
T ss_pred             ccccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcC------CCCEeeEEEEEe
Confidence            34567999999999999999999999999999999997532    22345667888888874      599999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +.+.+|+||||+ |++|.+++...+...+++..++.++.||+.||+|||++|||||||||+|||+               
T Consensus       255 ~~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILl---------------  319 (576)
T 2acx_A          255 TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL---------------  319 (576)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---------------
T ss_pred             eCCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEE---------------
Confidence            999999999999 9999999988765569999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                               +.++.+||+|||++......  ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.+.
T Consensus       320 ---------d~~g~vKL~DFGla~~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~  390 (576)
T 2acx_A          320 ---------DDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKK  390 (576)
T ss_dssp             ---------CTTSCEEECCCTTCEECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSS
T ss_pred             ---------eCCCCeEEEecccceecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCccccc
Confidence                     45678999999998764332  3456899999999999999999999999999999999999999987543


Q ss_pred             ----HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          296 ----LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       296 ----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                          .+....+....                                                  ...+..++.++.+||
T Consensus       391 ~~~~~~i~~~i~~~~--------------------------------------------------~~~p~~~s~~~~dLI  420 (576)
T 2acx_A          391 KIKREEVERLVKEVP--------------------------------------------------EEYSERFSPQARSLC  420 (576)
T ss_dssp             CCCHHHHHHHHHHCC--------------------------------------------------CCCCTTSCHHHHHHH
T ss_pred             chhHHHHHHHhhccc--------------------------------------------------ccCCccCCHHHHHHH
Confidence                22222221110                                                  112245688899999


Q ss_pred             HHccccCCCCCC-----CHHHHhCCccccCCC
Q 015867          372 HGLLRYDPSERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~R~-----t~~ell~hp~f~~~~  398 (399)
                      .+||+.||.+||     |++|+++||||++++
T Consensus       421 ~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i~  452 (576)
T 2acx_A          421 SQLLCKDPAERLGCRGGSAREVKEHPLFKKLN  452 (576)
T ss_dssp             HHHTCSSGGGSTTCSSSHHHHHHTSGGGTTCC
T ss_pred             HHhccCCHHHcCCCCCCCHHHHHhChhhccCC
Confidence            999999999999     799999999999864

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.3e-49  Score=394.00  Aligned_cols=259  Identities=33%  Similarity=0.547  Sum_probs=221.5

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+.++|++.+.||+|+||+||+|.+..+++.||||++....   .....+..|+++++.+.      ||||+++++++.+
T Consensus        19 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~   92 (486)
T 3mwu_A           19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD------HPNIMKLFEILED   92 (486)
T ss_dssp             HHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCC------CTTBCCEEEEEEC
T ss_pred             ChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCC------CCCcCeEEEEEEc
Confidence            46678999999999999999999999999999999996432   23456778999998885      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+.+|+||||+ +++|.+.+...+  .+++..+..++.||+.||.|||++||+||||||+|||+...             
T Consensus        93 ~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~-------------  157 (486)
T 3mwu_A           93 SSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESK-------------  157 (486)
T ss_dssp             SSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSS-------------
T ss_pred             CCEEEEEEEcCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecC-------------
Confidence            99999999999 999999998765  59999999999999999999999999999999999999543             


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                              +.++.+||+|||++......  ....+||+.|+|||++.+ .|+.++|||||||++|+|++|.+||.+.+..
T Consensus       158 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~  228 (486)
T 3mwu_A          158 --------EKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNEY  228 (486)
T ss_dssp             --------STTCCEEECSCSCTTTBCCC----CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH
T ss_pred             --------CCCCCEEEEECCcCeECCCCCccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence                    24667999999998754332  345689999999999986 5999999999999999999999999998888


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +.+..+......++.                                              ..+..++.++.+||.+||+
T Consensus       229 ~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~  262 (486)
T 3mwu_A          229 DILKRVETGKYAFDL----------------------------------------------PQWRTISDDAKDLIRKMLT  262 (486)
T ss_dssp             HHHHHHHHTCCCSCS----------------------------------------------GGGGGSCHHHHHHHHHHTC
T ss_pred             HHHHHHHhCCCCCCC----------------------------------------------cccCCCCHHHHHHHHHHcC
Confidence            877777654332221                                              1224568889999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCC
Q 015867          377 YDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .||.+|||+.|+|+||||++.
T Consensus       263 ~dp~~R~t~~~~l~hp~~~~~  283 (486)
T 3mwu_A          263 FHPSLRITATQCLEHPWIQKY  283 (486)
T ss_dssp             SSTTTSCCHHHHHHCHHHHHT
T ss_pred             CChhhCcCHHHHhcCHhhccC
Confidence            999999999999999999864

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.8e-50  Score=371.49  Aligned_cols=251  Identities=23%  Similarity=0.407  Sum_probs=204.1

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---------------------------hhHHHHHHHHHHH
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---------------------------YRDAAMIEIDVLQ  117 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------------------~~~~~~~e~~~l~  117 (399)
                      .++|++.+.||+|+||.||+|++..+++.||||++.....                           ....+..|+++++
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~   91 (298)
T 2zv2_A           12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK   91 (298)
T ss_dssp             ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred             ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence            4689999999999999999999999999999999865321                           1234667888888


Q ss_pred             HhhhcCCCCCcceeeeceeecc--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Q 015867          118 HLAKNDKGGSSHCVQIRNWFDY--RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTD  194 (399)
Q Consensus       118 ~l~~~~~~~~~~iv~~~~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~D  194 (399)
                      .+.      ||||+++++++.+  .+..++||||+ +++|.+++..   ..+++..+..++.||+.||+|||++||+|||
T Consensus        92 ~l~------h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~D  162 (298)
T 2zv2_A           92 KLD------HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL---KPLSEDQARFYFQDLIKGIEYLHYQKIIHRD  162 (298)
T ss_dssp             TCC------CTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCC
T ss_pred             hCC------CCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeccC
Confidence            774      6999999999886  57899999999 8888876543   2599999999999999999999999999999


Q ss_pred             CCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCC---CC
Q 015867          195 LKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLG---WS  268 (399)
Q Consensus       195 ikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~---~~  268 (399)
                      |||+|||+                        +.++.+||+|||++......   .....||+.|+|||++.+..   ++
T Consensus       163 lkp~Nil~------------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~  218 (298)
T 2zv2_A          163 IKPSNLLV------------------------GEDGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSG  218 (298)
T ss_dssp             CCGGGEEE------------------------CTTSCEEECCCTTCEECSSSSCEECCCCSCGGGCCGGGCCTTCCCEES
T ss_pred             CCHHHEEE------------------------CCCCCEEEecCCCccccccccccccCCcCCccccChhhhccCCCCCCC
Confidence            99999999                        44678999999998764332   24567999999999998765   47


Q ss_pred             CcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHh
Q 015867          269 YPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK  348 (399)
Q Consensus       269 ~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  348 (399)
                      .++|||||||++|+|++|..||...+.......+......+|                                      
T Consensus       219 ~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~--------------------------------------  260 (298)
T 2zv2_A          219 KALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFP--------------------------------------  260 (298)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC--------------------------------------
T ss_pred             chhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCC--------------------------------------
Confidence            889999999999999999999988766555444433211111                                      


Q ss_pred             hhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                                ..+.++.++.+||.+||+.||.+|||+.|+++||||++
T Consensus       261 ----------~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          261 ----------DQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             ----------SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             ----------CccccCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence                      11356788999999999999999999999999999974

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=3.2e-49  Score=364.29  Aligned_cols=260  Identities=28%  Similarity=0.431  Sum_probs=211.6

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||+|++....  .....+..|+++++.+.      ||||+++++++.+
T Consensus        18 g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~   91 (285)
T 3is5_A           18 GTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD------HPNIIKIFEVFED   91 (285)
T ss_dssp             SCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCC------CTTBCCEEEEEEC
T ss_pred             CChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCC------CchHHhHHHheec
Confidence            356678999999999999999999999999999999997543  23456778888888874      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      .+..++||||+ +++|.+++...  ....+++..+..++.||+.||+|||++||+||||||+|||+..+           
T Consensus        92 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~-----------  160 (285)
T 3is5_A           92 YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT-----------  160 (285)
T ss_dssp             SSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSS-----------
T ss_pred             CCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecC-----------
Confidence            99999999999 88999988643  12369999999999999999999999999999999999999542           


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                                +.++.+||+|||++.....  ......||+.|+|||++. ..++.++||||||+++|+|++|..||.+.+
T Consensus       161 ----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~-~~~~~~~Di~slG~il~~ll~g~~pf~~~~  229 (285)
T 3is5_A          161 ----------SPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTS  229 (285)
T ss_dssp             ----------STTCCEEECCCCCCCC----------CTTGGGCCHHHHT-TCCCHHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ----------CCCCCEEEEeeecceecCCcccCcCcccccCcCChHHhc-cCCCcccCeehHHHHHHHHHhCCCCCCCCC
Confidence                      2467899999999876332  234567999999999986 468999999999999999999999999877


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....+.......+                                               .....+++++.+||.+|
T Consensus       230 ~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~~li~~~  262 (285)
T 3is5_A          230 LEEVQQKATYKEPNYA-----------------------------------------------VECRPLTPQAVDLLKQM  262 (285)
T ss_dssp             HHHHHHHHHHCCCCCC-----------------------------------------------C--CCCCHHHHHHHHHH
T ss_pred             HHHHHhhhccCCcccc-----------------------------------------------cccCcCCHHHHHHHHHH
Confidence            6655544432211111                                               00123567889999999


Q ss_pred             cccCCCCCCCHHHHhCCccccC
Q 015867          375 LRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |+.||.+|||+.|+|+||||++
T Consensus       263 L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          263 LTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             TCSCTTTSCCHHHHHTSGGGGC
T ss_pred             ccCChhhCcCHHHHhcCHHhhc
Confidence            9999999999999999999986

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=3.8e-49  Score=368.89  Aligned_cols=262  Identities=24%  Similarity=0.432  Sum_probs=207.5

Q ss_pred             CccCCCEEEE-eeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           62 ENLTPRYKIL-SKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        62 ~~~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ..+.++|++. +.||+|+||.||+|.+..+++.||||++.... .....+..|++++..+.     +|+||+++++++.+
T Consensus         8 ~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~-----~h~~i~~~~~~~~~   82 (316)
T 2ac3_A            8 GRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQ-----GHRNVLELIEFFEE   82 (316)
T ss_dssp             CCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTC-----CCTTBCCEEEEEEE
T ss_pred             cccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhc-----CCCCeeeEEEEEee
Confidence            3466789996 78999999999999999999999999997543 23456778888887753     47999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..|+||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||++.++            
T Consensus        83 ~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~------------  148 (316)
T 2ac3_A           83 EDRFYLVFEKMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPN------------  148 (316)
T ss_dssp             TTEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSS------------
T ss_pred             CCEEEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCC------------
Confidence            99999999999 899999998765  599999999999999999999999999999999999995432            


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCC----------CCcccccCCCccchhhhhC-----CCCCCcchhHHHHHHHHHH
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQ----------NHSSIVSTRHYRAPEVILG-----LGWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~-----~~~~~~~DiwslG~il~el  283 (399)
                               ....+||+|||++.....          .....+||+.|+|||++.+     ..++.++|||||||++|+|
T Consensus       149 ---------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l  219 (316)
T 2ac3_A          149 ---------QVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYIL  219 (316)
T ss_dssp             ---------SSCSEEECCTTCCC-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHH
T ss_pred             ---------CcCceEEEEccCccccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHH
Confidence                     234599999998765321          1224569999999999975     4588999999999999999


Q ss_pred             HhCCCCCCCCCcH---------------HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHh
Q 015867          284 CTGEALFQTHENL---------------EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK  348 (399)
Q Consensus       284 l~g~~Pf~~~~~~---------------~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  348 (399)
                      ++|..||.+....               .....+......+|.                                     
T Consensus       220 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------------------------------------  262 (316)
T 2ac3_A          220 LSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPD-------------------------------------  262 (316)
T ss_dssp             HHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCH-------------------------------------
T ss_pred             HHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCc-------------------------------------
Confidence            9999999865421               111222111111111                                     


Q ss_pred             hhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                               .....++.++.+||.+||+.||.+|||+.|+++||||++.
T Consensus       263 ---------~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  302 (316)
T 2ac3_A          263 ---------KDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGC  302 (316)
T ss_dssp             ---------HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC--
T ss_pred             ---------hhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCC
Confidence                     1123567889999999999999999999999999999975

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.3e-49  Score=394.71  Aligned_cols=260  Identities=30%  Similarity=0.523  Sum_probs=217.1

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ...+.++|++++.||+|+||+||+|++..++..||||++....   .....+..|+.+++.+.      ||||+++++++
T Consensus        32 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~  105 (494)
T 3lij_A           32 KGHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD------HPNIMKLYDFF  105 (494)
T ss_dssp             BCCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCC------CTTBCCEEEEE
T ss_pred             CCchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCC------CCCCCeEEEEE
Confidence            3445668999999999999999999999999999999997532   23455677888877764      69999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      .+.+..|+||||| +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++..           
T Consensus       106 ~~~~~~~lv~e~~~~g~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~-----------  172 (494)
T 3lij_A          106 EDKRNYYLVMECYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESK-----------  172 (494)
T ss_dssp             ECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS-----------
T ss_pred             EeCCEEEEEEecCCCCcHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCC-----------
Confidence            9999999999999 999999988765  59999999999999999999999999999999999999543           


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                                +.+..+||+|||++.....  .....+||+.|+|||++. ..++.++|||||||++|+|++|.+||.+.+
T Consensus       173 ----------~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~  241 (494)
T 3lij_A          173 ----------EKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLR-KKYDEKCDVWSIGVILFILLAGYPPFGGQT  241 (494)
T ss_dssp             ----------STTCCEEECCCTTCEECBTTBCBCCCCSCTTTCCHHHHT-TCBCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred             ----------CCCCcEEEEECCCCeECCCCccccccCCCcCeeCHHHHc-ccCCCchhHHHHHHHHHHHHhCCCCCCCCC
Confidence                      2356799999999876433  234568999999999986 469999999999999999999999999988


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+.+..+......++.                                              ..+..++..+.+||.+|
T Consensus       242 ~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~  275 (494)
T 3lij_A          242 DQEILRKVEKGKYTFDS----------------------------------------------PEWKNVSEGAKDLIKQM  275 (494)
T ss_dssp             HHHHHHHHHHTCCCCCS----------------------------------------------GGGTTSCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCc----------------------------------------------hhcccCCHHHHHHHHHH
Confidence            88887777665433221                                              11235678899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccC
Q 015867          375 LRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |+.||.+|||+.|+|+||||++
T Consensus       276 L~~dp~~R~s~~e~l~hp~~~~  297 (494)
T 3lij_A          276 LQFDSQRRISAQQALEHPWIKE  297 (494)
T ss_dssp             TCSSTTTSCCHHHHHTCHHHHH
T ss_pred             CCCChhhCccHHHHhcCccccc
Confidence            9999999999999999999975

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=6.8e-49  Score=373.87  Aligned_cols=286  Identities=29%  Similarity=0.503  Sum_probs=217.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC---
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN---  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~---  141 (399)
                      .++|++.+.||+|+||.||+|.+..+++.||||++............+++.+..+.      |+||+++++++...+   
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~------h~niv~~~~~~~~~~~~~   95 (360)
T 3e3p_A           22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH------HPNIVQLQSYFYTLGERD   95 (360)
T ss_dssp             HTTEEEC----------CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHC------CTTBCCEEEEEEEECSSC
T ss_pred             ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcC------CCCcccHHHhhhcccccc
Confidence            45799999999999999999999999999999998765444455555666666654      699999999986532   


Q ss_pred             ----eEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHH--HCCccccCCCCCcEEEeecccccCCCC
Q 015867          142 ----HICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAYMH--DLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       142 ----~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~lH--~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                          ..++||||++++|.+.+..  .....+++..+..++.||+.||.|||  ++||+||||||+|||++.         
T Consensus        96 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~---------  166 (360)
T 3e3p_A           96 RRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNE---------  166 (360)
T ss_dssp             TTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEET---------
T ss_pred             ccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeC---------
Confidence                3899999997787766543  23336899999999999999999999  999999999999999942         


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                                    .++.+||+|||++......  .....||+.|+|||++.+.. ++.++|||||||++|+|++|..||
T Consensus       167 --------------~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf  232 (360)
T 3e3p_A          167 --------------ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF  232 (360)
T ss_dssp             --------------TTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred             --------------CCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCc
Confidence                          3668999999998764432  34567999999999997654 899999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccc-cCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYF-RRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      .+.+..+.+..+.+..+.++..++........... .......|                   ...........+.++.+
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~  293 (360)
T 3e3p_A          233 RGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPW-------------------SNVFSDHSLKDAKEAYD  293 (360)
T ss_dssp             CCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCH-------------------HHHTTTCCCTTHHHHHH
T ss_pred             CCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCc-------------------ccccchhhccccHHHHH
Confidence            99999999999999999999888776643222110 00000111                   11112223456788999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ||.+||+.||.+|||+.|+|+||||+++.
T Consensus       294 li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  322 (360)
T 3e3p_A          294 LLSALLQYLPEERMKPYEALCHPYFDELH  322 (360)
T ss_dssp             HHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred             HHHHHhccCccccCCHHHHhcCccccccC
Confidence            99999999999999999999999999864

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=5.8e-49  Score=378.92  Aligned_cols=284  Identities=30%  Similarity=0.531  Sum_probs=224.4

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ++....+|++.+.||+|+||.||+|++..+++ ||+|++....   .....|+++++.+.      |+||+++++++...
T Consensus        35 ~~~~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~---~~~~~E~~il~~l~------h~niv~l~~~~~~~  104 (394)
T 4e7w_A           35 GEQREIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDK---RFKNRELQIMRIVK------HPNVVDLKAFFYSN  104 (394)
T ss_dssp             CCEEEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCT---TSCCHHHHHHHTCC------CTTBCCEEEEEEEE
T ss_pred             CCcccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCc---chHHHHHHHHHhCC------CCCcceEEEEEEec
Confidence            44456689999999999999999999877766 8888875432   22335888888875      59999999998543


Q ss_pred             ------CeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          141 ------NHICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       141 ------~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                            ...++||||+.+++.+.+..  .....+++..++.++.||+.||+|||++||+||||||+|||++.        
T Consensus       105 ~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~--------  176 (394)
T 4e7w_A          105 GDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDP--------  176 (394)
T ss_dssp             SSSSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--------
T ss_pred             CCCCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcC--------
Confidence                  34899999997777665542  12236999999999999999999999999999999999999941        


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccC--CCCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCC
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD--NQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~--~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                     .++.+||+|||++...  .......+||+.|+|||++.+. .++.++|||||||++|+|++|+.|
T Consensus       177 ---------------~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~p  241 (394)
T 4e7w_A          177 ---------------PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL  241 (394)
T ss_dssp             ---------------TTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ---------------CCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence                           4678999999998753  3334567899999999999875 599999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+..+.+..+.+..+.++...+..........       .+|...              ...+.....+.++.++.+
T Consensus       242 f~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~-------~~~~~~--------------~~~~~~~~~~~~~~~~~~  300 (394)
T 4e7w_A          242 FPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEH-------KFPQIR--------------PHPFSKVFRPRTPPDAID  300 (394)
T ss_dssp             SCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSS-------CCCCCC--------------CCCHHHHSCTTCCHHHHH
T ss_pred             CCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhh-------cccccc--------------CCcHHHhccccCCHHHHH
Confidence            99999999999999999998887766543221110       111100              001111233457889999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ||.+||+.||.+|||+.|+++||||+++.
T Consensus       301 li~~~L~~dP~~R~t~~e~l~hp~f~~~~  329 (394)
T 4e7w_A          301 LISRLLEYTPSARLTAIEALCHPFFDELR  329 (394)
T ss_dssp             HHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred             HHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence            99999999999999999999999999863

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=6.1e-49  Score=390.45  Aligned_cols=254  Identities=23%  Similarity=0.385  Sum_probs=213.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++.+.||+|+||.||+|++..+|+.||||++....    .....+..|.++++.+.      ||||+++++++.+.
T Consensus       184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~------hp~Iv~l~~~~~~~  257 (543)
T 3c4z_A          184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVH------SRFIVSLAYAFETK  257 (543)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC------CTTBCCEEEEEECS
T ss_pred             hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcC------CCCEeeEEEEEeeC
Confidence            468999999999999999999999999999999997532    22345677888888874      69999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +.+|+||||+ |++|.+++....  ...+++..++.++.||+.||+|||++||+||||||+|||+               
T Consensus       258 ~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl---------------  322 (543)
T 3c4z_A          258 TDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---------------  322 (543)
T ss_dssp             SEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE---------------
T ss_pred             CEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEE---------------
Confidence            9999999999 999999998654  3369999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                               +.++.+||+|||++......   ....+||+.|+|||++.+..|+.++|||||||++|+|++|..||.+.+
T Consensus       323 ---------~~~g~vkL~DFGla~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~  393 (543)
T 3c4z_A          323 ---------DDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARG  393 (543)
T ss_dssp             ---------CTTSCEEECCCTTCEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred             ---------eCCCCEEEeecceeeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence                     45678999999998764322   244689999999999999999999999999999999999999998753


Q ss_pred             c----HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          295 N----LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       295 ~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .    .+....+.....                                                  ..++.++.++.+|
T Consensus       394 ~~~~~~~~~~~i~~~~~--------------------------------------------------~~p~~~s~~~~~l  423 (543)
T 3c4z_A          394 EKVENKELKQRVLEQAV--------------------------------------------------TYPDKFSPASKDF  423 (543)
T ss_dssp             CCCCHHHHHHHHHHCCC--------------------------------------------------CCCTTSCHHHHHH
T ss_pred             cchhHHHHHHHHhhccc--------------------------------------------------CCCcccCHHHHHH
Confidence            2    223333322111                                                  1224568889999


Q ss_pred             HHHccccCCCCCCC-----HHHHhCCccccCCC
Q 015867          371 LHGLLRYDPSERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       371 i~~~L~~dP~~R~t-----~~ell~hp~f~~~~  398 (399)
                      |.+||+.||.+||+     ++++++||||++++
T Consensus       424 i~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i~  456 (543)
T 3c4z_A          424 CEALLQKDPEKRLGFRDGSCDGLRTHPLFRDIS  456 (543)
T ss_dssp             HHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTCC
T ss_pred             HHHhccCCHhHCCCCcccCHHHHHcCccccCCC
Confidence            99999999999996     58999999999864

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=3.5e-49  Score=362.66  Aligned_cols=252  Identities=25%  Similarity=0.441  Sum_probs=212.1

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ..++|++.+.||+|+||.||+|.+..+++.||||++.....    ....+..|+.+++.+      .||||+++++++.+
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~i~~~~~~~~~   80 (279)
T 3fdn_A            7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL------RHPNILRLYGYFHD   80 (279)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTC------CCTTBCCEEEEEEC
T ss_pred             ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcC------CCCCCcchhheEec
Confidence            34679999999999999999999999999999999865322    233455566666655      46999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+                
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili----------------  142 (279)
T 3fdn_A           81 ATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL----------------  142 (279)
T ss_dssp             SSEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEE----------------
T ss_pred             CCEEEEEEecCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEE----------------
Confidence            99999999999 889999998765  59999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                              +.++.++|+|||++..... ......||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+
T Consensus       143 --------~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  214 (279)
T 3fdn_A          143 --------GSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQE  214 (279)
T ss_dssp             --------CTTSCEEECSCCEESCC--------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH
T ss_pred             --------cCCCCEEEEeccccccCCcccccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHH
Confidence                    4567799999998765433 2345689999999999999999999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+......+|                                                  ..++..+.+||.+||+.
T Consensus       215 ~~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~li~~~l~~  244 (279)
T 3fdn_A          215 TYKRISRVEFTFP--------------------------------------------------DFVTEGARDLISRLLKH  244 (279)
T ss_dssp             HHHHHHHTCCCCC--------------------------------------------------TTSCHHHHHHHHHHCCS
T ss_pred             HHHHHHhCCCCCC--------------------------------------------------CcCCHHHHHHHHHHhcc
Confidence            6666654332222                                                  34567789999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|||+.|+++||||++.
T Consensus       245 ~p~~Rps~~e~l~h~~~~~~  264 (279)
T 3fdn_A          245 NPSQRPMLREVLEHPWITAN  264 (279)
T ss_dssp             SGGGSCCHHHHHHCHHHHHH
T ss_pred             ChhhCCCHHHHhhCccccCC
Confidence            99999999999999999864

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=9.7e-50  Score=394.71  Aligned_cols=263  Identities=30%  Similarity=0.523  Sum_probs=223.7

Q ss_pred             ccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           59 NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        59 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      .....+.++|++.+.||+|+||.||+|.+..+++.||||++...    ......+..|+.+++.+.      ||||++++
T Consensus        19 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~   92 (484)
T 3nyv_A           19 HSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD------HPNIMKLY   92 (484)
T ss_dssp             CCCCCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCC------CTTBCCEE
T ss_pred             cCCCcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCC------CCCCCcEE
Confidence            33456778999999999999999999999999999999998643    223456777888887774      69999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      +++.+.+..|+||||+ +++|.+++...+  .+++..+..++.||+.||.|||++||+||||||+|||+...        
T Consensus        93 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~--------  162 (484)
T 3nyv_A           93 EFFEDKGYFYLVGEVYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESK--------  162 (484)
T ss_dssp             EEEECSSEEEEEECCCCSCBHHHHHHTCS--CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS--------
T ss_pred             EEEEeCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecC--------
Confidence            9999999999999999 999999998765  59999999999999999999999999999999999999542        


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                   +.++.+||+|||++......  ....+||+.|+|||++.+ .++.++|||||||++|+|++|.+||.
T Consensus       163 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~  228 (484)
T 3nyv_A          163 -------------SKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFN  228 (484)
T ss_dssp             -------------STTCCEEECCTTHHHHBCCCCSHHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             -------------CCCCcEEEEeeeeeEEcccccccccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCC
Confidence                         24678999999988654332  345679999999999987 69999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+.+..+......++.                                              ..+..++.++.+||
T Consensus       229 ~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li  262 (484)
T 3nyv_A          229 GANEYDILKKVEKGKYTFEL----------------------------------------------PQWKKVSESAKDLI  262 (484)
T ss_dssp             CSSHHHHHHHHHHCCCCCCS----------------------------------------------GGGGGSCHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCCCCC----------------------------------------------cccccCCHHHHHHH
Confidence            98888887777654332221                                              12245688899999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccCC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .+||+.||.+|||+.|+|+||||+..
T Consensus       263 ~~~L~~dp~~R~s~~e~l~h~~~~~~  288 (484)
T 3nyv_A          263 RKMLTYVPSMRISARDALDHEWIQTY  288 (484)
T ss_dssp             HHHTCSSGGGSCCHHHHHTSHHHHHH
T ss_pred             HHHCCCChhHCcCHHHHhhChhhccc
Confidence            99999999999999999999999753

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=2.4e-49  Score=388.82  Aligned_cols=254  Identities=27%  Similarity=0.409  Sum_probs=215.9

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      +....++|.+.+.||+|+||.||+|.+..+|+.||||++.....    ....+..|+.+++.+      .||||++++++
T Consensus        11 ~~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l------~HpnIv~l~~~   84 (476)
T 2y94_A           11 GRVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLF------RHPHIIKLYQV   84 (476)
T ss_dssp             SCCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTC------CCTTBCCEEEE
T ss_pred             CCceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhC------CCCCCCcEEEE
Confidence            34455789999999999999999999999999999999975321    224566677777665      46999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +...+..|+||||+ |++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||+             
T Consensus        85 ~~~~~~~~lv~E~~~gg~L~~~l~~~~--~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll-------------  149 (476)
T 2y94_A           85 ISTPSDIFMVMEYVSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLL-------------  149 (476)
T ss_dssp             EECSSEEEEEEECCSSEEHHHHTTSSS--SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEE-------------
T ss_pred             EEECCEEEEEEeCCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEE-------------
Confidence            99999999999999 999999998765  69999999999999999999999999999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                 +.++.+||+|||++.....  ...+.+||+.|+|||++.+..+ +.++|||||||++|+|++|..||.+
T Consensus       150 -----------~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~  218 (476)
T 2y94_A          150 -----------DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD  218 (476)
T ss_dssp             -----------CTTCCEEECCCSSCEECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -----------ecCCCeEEEeccchhhccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence                       4567799999999876433  2356789999999999998765 7899999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....+.......                                                  +..++.++.+||.
T Consensus       219 ~~~~~~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~~Li~  248 (476)
T 2y94_A          219 DHVPTLFKKICDGIFYT--------------------------------------------------PQYLNPSVISLLK  248 (476)
T ss_dssp             SSSHHHHHHHHTTCCCC--------------------------------------------------CTTCCHHHHHHHH
T ss_pred             CCHHHHHHHHhcCCcCC--------------------------------------------------CccCCHHHHHHHH
Confidence            88777666654332111                                                  1245678899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +||+.||.+|||+.|+++||||++
T Consensus       249 ~~L~~dP~~Rpt~~eil~hp~~~~  272 (476)
T 2y94_A          249 HMLQVDPMKRATIKDIREHEWFKQ  272 (476)
T ss_dssp             HHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred             HHcCCCchhCcCHHHHHhCHHhhh
Confidence            999999999999999999999975

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-49  Score=374.12  Aligned_cols=281  Identities=30%  Similarity=0.485  Sum_probs=220.4

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh------hhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ..++|++.+.||+|+||.||+|.+..+|+.||||++.....      ....+..|+++++.+.      |+||+++++++
T Consensus         8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~   81 (346)
T 1ua2_A            8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS------HPNIIGLLDAF   81 (346)
T ss_dssp             -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC------CTTBCCEEEEE
T ss_pred             HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCC------CCCCCeEEEEE
Confidence            35689999999999999999999999999999999864221      1235667888888875      59999999999


Q ss_pred             ccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          138 DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       138 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      .+.+..++||||+.++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||+               
T Consensus        82 ~~~~~~~lv~e~~~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~---------------  145 (346)
T 1ua2_A           82 GHKSNISLVFDFMETDLEVIIKDNSL-VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---------------  145 (346)
T ss_dssp             CCTTCCEEEEECCSEEHHHHHTTCCS-SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE---------------
T ss_pred             eeCCceEEEEEcCCCCHHHHHHhcCc-CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEE---------------
Confidence            99999999999997799999876542 58999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                               +.++.+||+|||++.....   .....+||+.|+|||++.+. .++.++|||||||++|+|++|.+||.+.
T Consensus       146 ---------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~  216 (346)
T 1ua2_A          146 ---------DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGD  216 (346)
T ss_dssp             ---------CTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ---------cCCCCEEEEecccceeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence                     4467899999999876432   23456799999999999765 5899999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+.+..+....+.++...+............ .   ..|.                  .........++.++.+||.+
T Consensus       217 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~------------------~~~~~~~~~~~~~~~~li~~  274 (346)
T 1ua2_A          217 SDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTF-K---SFPG------------------IPLHHIFSAAGDDLLDLIQG  274 (346)
T ss_dssp             SHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCC-C---CCCC------------------CCHHHHCTTCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHcCCCChhhhhhhccCcccccc-c---ccCC------------------CChHHhhccCCHHHHHHHHH
Confidence            999999998888777655433322111110000 0   0000                  00011224667889999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||+.||.+|||+.|+|+||||++.
T Consensus       275 ~L~~dP~~Rpt~~ell~h~~f~~~  298 (346)
T 1ua2_A          275 LFLFNPCARITATQALKMKYFSNR  298 (346)
T ss_dssp             HHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred             HhccChhhCCCHHHHhcChhhhcC
Confidence            999999999999999999999874

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=1.3e-48  Score=372.24  Aligned_cols=288  Identities=26%  Similarity=0.433  Sum_probs=221.9

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh------------hhHHHHHHHHHHHHhhhcCCCCCc
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK------------YRDAAMIEIDVLQHLAKNDKGGSS  128 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~------------~~~~~~~e~~~l~~l~~~~~~~~~  128 (399)
                      ...+.++|++.+.||+|+||.||+|.+.. ++.||||++.....            ....+..|+++++.+.      ||
T Consensus        17 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~   89 (362)
T 3pg1_A           17 LHAMQSPYTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH------HP   89 (362)
T ss_dssp             HHHTTCSCEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCC------CT
T ss_pred             HHHhccceEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCC------Cc
Confidence            34567889999999999999999998754 88999999854221            1256778888888885      59


Q ss_pred             ceeeeceeec-----cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 015867          129 HCVQIRNWFD-----YRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLV  203 (399)
Q Consensus       129 ~iv~~~~~~~-----~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~  203 (399)
                      ||+++++++.     .....|+||||++++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||+ 
T Consensus        90 ~iv~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~-  167 (362)
T 3pg1_A           90 NILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQR-IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILL-  167 (362)
T ss_dssp             TBCCCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTT-SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-
T ss_pred             CccceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEE-
Confidence            9999999884     345789999999889999987653 269999999999999999999999999999999999999 


Q ss_pred             ecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhC-CCCCCcchhHHHHHHH
Q 015867          204 SSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCIL  280 (399)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il  280 (399)
                                             +.++.+||+|||++.....  ......||+.|+|||++.+ ..++.++|||||||++
T Consensus       168 -----------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il  224 (362)
T 3pg1_A          168 -----------------------ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM  224 (362)
T ss_dssp             -----------------------CTTCCEEECCTTC---------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHH
T ss_pred             -----------------------cCCCCEEEEecCcccccccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHH
Confidence                                   3466799999999875332  3345679999999999987 6799999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccc
Q 015867          281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV  360 (399)
Q Consensus       281 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (399)
                      |+|++|..||.+.+..+....+....+.++..............+........+..                  ......
T Consensus       225 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~  286 (362)
T 3pg1_A          225 AEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPAR------------------AWTAVV  286 (362)
T ss_dssp             HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCC------------------CHHHHS
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChh------------------hHHhhC
Confidence            99999999999999999999999988887766544332211111111111111110                  011223


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       361 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +.++..+.+||.+||+.||.+|||+.|+++||||+++.
T Consensus       287 ~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  324 (362)
T 3pg1_A          287 PTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF  324 (362)
T ss_dssp             TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence            45678899999999999999999999999999999863

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=9.6e-49  Score=369.45  Aligned_cols=255  Identities=29%  Similarity=0.451  Sum_probs=217.2

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      .....++|.+.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.+++.+.      |+||++++++
T Consensus        36 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~  109 (335)
T 2owb_A           36 DPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA------HQHVVGFHGF  109 (335)
T ss_dssp             ETTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC------CTTBCCEEEE
T ss_pred             CcccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCC------CCCCCeEEEE
Confidence            3445678999999999999999999999999999999987532    23455667888877764      6999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +.+.+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+             
T Consensus       110 ~~~~~~~~lv~e~~~~~~L~~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~-------------  174 (335)
T 2owb_A          110 FEDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL-------------  174 (335)
T ss_dssp             EECSSEEEEEECCCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE-------------
T ss_pred             EecCCeEEEEEecCCCCCHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEE-------------
Confidence            99999999999999 899999998765  59999999999999999999999999999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                 +.++.++|+|||++....   .......||+.|+|||++.+..++.++||||||+++|+|++|..||..
T Consensus       175 -----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  243 (335)
T 2owb_A          175 -----------NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFET  243 (335)
T ss_dssp             -----------CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred             -----------cCCCCEEEeeccCceecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCC
Confidence                       346679999999986533   223456799999999999999999999999999999999999999988


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      ....+....+......+                                                  +..++..+.+||.
T Consensus       244 ~~~~~~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~li~  273 (335)
T 2owb_A          244 SCLKETYLRIKKNEYSI--------------------------------------------------PKHINPVAASLIQ  273 (335)
T ss_dssp             SSHHHHHHHHHHTCCCC--------------------------------------------------CTTSCHHHHHHHH
T ss_pred             CCHHHHHHHHhcCCCCC--------------------------------------------------CccCCHHHHHHHH
Confidence            77666655544322111                                                  1245677899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||+.||.+|||+.|+++||||++.
T Consensus       274 ~~l~~dp~~Rps~~ell~~~~~~~~  298 (335)
T 2owb_A          274 KMLQTDPTARPTINELLNDEFFTSG  298 (335)
T ss_dssp             HHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HHccCChhHCcCHHHHhcCccccCC
Confidence            9999999999999999999999864

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=8.6e-49  Score=372.07  Aligned_cols=284  Identities=27%  Similarity=0.483  Sum_probs=223.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--  139 (399)
                      .++|++++.||+|+||.||+|++..+|+.||||++....   .....+..|+++++.+.      |+||+++++++..  
T Consensus        16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~   89 (351)
T 3mi9_A           16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK------HENVVNLIEICRTKA   89 (351)
T ss_dssp             GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCC------CTTBCCEEEEEEEC-
T ss_pred             ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhcc------CCCcccHhheeeccc
Confidence            368999999999999999999999999999999985432   22345677899998885      5999999998876  


Q ss_pred             ------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 ------RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                            .+..|+||||++++|.+.+..... .+++..++.++.||+.||+|||++||+||||||+|||+           
T Consensus        90 ~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~-----------  157 (351)
T 3mi9_A           90 SPYNRCKGSIYLVFDFCEHDLAGLLSNVLV-KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI-----------  157 (351)
T ss_dssp             -------CEEEEEEECCSEEHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE-----------
T ss_pred             cccccCCceEEEEEeccCCCHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEE-----------
Confidence                  457899999998799888876543 59999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCC-------CCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHh
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-------QNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-------~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~  285 (399)
                                   +.++.+||+|||++....       ......+||+.|+|||++.+. .++.++|||||||++|+|++
T Consensus       158 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~  224 (351)
T 3mi9_A          158 -------------TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT  224 (351)
T ss_dssp             -------------CTTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred             -------------cCCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHh
Confidence                         456789999999886532       122456789999999999864 68999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |.+||.+.+..+....+....+.++...++.......  +..   ......... .....            ......++
T Consensus       225 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~-~~~~~------------~~~~~~~~  286 (351)
T 3mi9_A          225 RSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYEL--YEK---LELVKGQKR-KVKDR------------LKAYVRDP  286 (351)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGG--GTS---SCCCSSCCC-CHHHH------------HHHHHCCH
T ss_pred             CCCCCCCCChHHHHHHHHHHhCCCChhhccccccchh--hcc---ccccccccc-CHHHH------------hhhccCCh
Confidence            9999999999999999999988887665443321111  000   000000000 00000            00012366


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ++.+||.+||+.||.+|||++|+|+||||++.
T Consensus       287 ~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  318 (351)
T 3mi9_A          287 YALDLIDKLLVLDPAQRIDSDDALNHDFFWSD  318 (351)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred             HHHHHHHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence            78999999999999999999999999999874

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=1.2e-48  Score=367.79  Aligned_cols=281  Identities=26%  Similarity=0.522  Sum_probs=218.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--CCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--RNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--~~~  142 (399)
                      .++|++.+.||+|+||.||+|.+..+++.||||++...  ....+..|+.+++.+.     +|+||+++++++.+  ...
T Consensus        35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~E~~~l~~l~-----~~~~i~~~~~~~~~~~~~~  107 (330)
T 3nsz_A           35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV--KKKKIKREIKILENLR-----GGPNIITLADIVKDPVSRT  107 (330)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC--CHHHHHHHHHHHHHHT-----TSTTBCCEEEEEECTTTCC
T ss_pred             CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc--chHHHHHHHHHHHHcC-----CCCCEEEeeeeeccCCCCc
Confidence            46899999999999999999999999999999998743  3466788999999987     36999999999987  678


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|.+++.     .+++..++.++.||+.||+|||++||+||||||+|||++.                 
T Consensus       108 ~~lv~e~~~~~~l~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~-----------------  165 (330)
T 3nsz_A          108 PALVFEHVNNTDFKQLYQ-----TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH-----------------  165 (330)
T ss_dssp             EEEEEECCCCCCHHHHGG-----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET-----------------
T ss_pred             eEEEEeccCchhHHHHHH-----hCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC-----------------
Confidence            99999999 899999875     3899999999999999999999999999999999999953                 


Q ss_pred             CcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCC-CCCcHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQ-THENLE  297 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~-~~~~~~  297 (399)
                            .+..+||+|||++....  .......||+.|+|||++.+ ..++.++|||||||++|+|++|..||. +.+..+
T Consensus       166 ------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~  239 (330)
T 3nsz_A          166 ------EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD  239 (330)
T ss_dssp             ------TTTEEEECCCTTCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH
T ss_pred             ------CCCEEEEEeCCCceEcCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHH
Confidence                  23479999999987533  23355679999999999987 679999999999999999999999995 455556


Q ss_pred             HHHHHHHHhCCCCHH-HHHHhccccc----ccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          298 HLAMMERALGPLPEH-MIRRASRGTE----KYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~-~~~~~~~~~~----~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....+..+.. ++........    ..........|                  ...........++.++.+||.
T Consensus       240 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~li~  301 (330)
T 3nsz_A          240 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRW------------------ERFVHSENQHLVSPEALDFLD  301 (330)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCG------------------GGGCCTTTGGGCCHHHHHHHH
T ss_pred             HHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccch------------------hhhccccccccCCHHHHHHHH
Confidence            666666655432111 1111000000    00000000011                  011112223457889999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||+.||.+|||++|+|+||||+++.
T Consensus       302 ~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          302 KLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             TTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             HHhcCCcccCCCHHHHhcCccHhhhc
Confidence            99999999999999999999999985

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=2.4e-48  Score=370.90  Aligned_cols=257  Identities=31%  Similarity=0.537  Sum_probs=217.0

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---------hhhHHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      .+.++|++.+.||+|+||.||+|.+..+|+.||||+++...         .....+..|+.+++.+.     +|+||+++
T Consensus        91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~~  165 (365)
T 2y7j_A           91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVA-----GHPHIITL  165 (365)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHT-----TCTTBCCE
T ss_pred             hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhc-----CCCCEeEE
Confidence            34568999999999999999999998899999999986532         12345677888888884     36999999


Q ss_pred             ceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      ++++...+..|+||||+ |++|.+++....  .+++..+..++.||+.||.|||+.||+|+||||+|||+          
T Consensus       166 ~~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~----------  233 (365)
T 2y7j_A          166 IDSYESSSFMFLVFDLMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL----------  233 (365)
T ss_dssp             EEEEEBSSEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----------
T ss_pred             EEEEeeCCEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEE----------
Confidence            99999999999999999 889999998765  59999999999999999999999999999999999999          


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhC------CCCCCcchhHHHHHHHHHHH
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILG------LGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell  284 (399)
                                    +.++.++|+|||++.....  .....+||+.|+|||++.+      ..++.++|||||||++|+|+
T Consensus       234 --------------~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell  299 (365)
T 2y7j_A          234 --------------DDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLL  299 (365)
T ss_dssp             --------------CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHH
T ss_pred             --------------CCCCCEEEEecCcccccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHH
Confidence                          4567899999998876433  2345689999999999863      35889999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       285 ~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                      +|..||...+.......+......++..                                              .+..++
T Consensus       300 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~----------------------------------------------~~~~~~  333 (365)
T 2y7j_A          300 AGSPPFWHRRQILMLRMIMEGQYQFSSP----------------------------------------------EWDDRS  333 (365)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHTCCCCCHH----------------------------------------------HHSSSC
T ss_pred             HCCCCCCCCCHHHHHHHHHhCCCCCCCc----------------------------------------------ccccCC
Confidence            9999998877776666665543322211                                              113457


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ..+.+||.+||+.||.+|||+.|+|+||||++
T Consensus       334 ~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          334 STVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            78899999999999999999999999999974

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=1.8e-48  Score=365.34  Aligned_cols=251  Identities=25%  Similarity=0.441  Sum_probs=211.9

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      .|...+.||+|+||.||+|++..+|+.||||++..... ....+..|+.+++.+.      |+||+++++++...+..++
T Consensus        46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~l  119 (321)
T 2c30_A           46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ------HFNVVEMYKSYLVGEELWV  119 (321)
T ss_dssp             HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCC------CTTBCCEEEEEEETTEEEE
T ss_pred             hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCC------CCCcceEEEEEEECCEEEE
Confidence            48899999999999999999998999999999975332 2345667877777664      6999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||+                      
T Consensus       120 v~e~~~~~~L~~~l~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll----------------------  174 (321)
T 2c30_A          120 LMEFLQGGALTDIVSQV---RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILL----------------------  174 (321)
T ss_dssp             EECCCCSCBHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE----------------------
T ss_pred             EEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE----------------------
Confidence            99999 99999998754   49999999999999999999999999999999999999                      


Q ss_pred             cCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM  301 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~  301 (399)
                        +.++.+||+|||++.....   ......||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+....
T Consensus       175 --~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~  252 (321)
T 2c30_A          175 --TLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKR  252 (321)
T ss_dssp             --CTTCCEEECCCTTCEECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHH
T ss_pred             --CCCCcEEEeeeeeeeecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence              4466799999998865433   23456899999999999999999999999999999999999999988777665555


Q ss_pred             HHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCC
Q 015867          302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE  381 (399)
Q Consensus       302 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  381 (399)
                      +.....+.                                               ......++..+.+||.+||+.||.+
T Consensus       253 ~~~~~~~~-----------------------------------------------~~~~~~~~~~l~~li~~~l~~dp~~  285 (321)
T 2c30_A          253 LRDSPPPK-----------------------------------------------LKNSHKVSPVLRDFLERMLVRDPQE  285 (321)
T ss_dssp             HHHSSCCC-----------------------------------------------CTTGGGSCHHHHHHHHHHSCSSTTT
T ss_pred             HhcCCCCC-----------------------------------------------cCccccCCHHHHHHHHHHccCChhh
Confidence            43321100                                               0112346778899999999999999


Q ss_pred             CCCHHHHhCCccccCC
Q 015867          382 RLTARQALNHPFFRNL  397 (399)
Q Consensus       382 R~t~~ell~hp~f~~~  397 (399)
                      |||+.|+++||||++.
T Consensus       286 Rps~~ell~hp~~~~~  301 (321)
T 2c30_A          286 RATAQELLDHPFLLQT  301 (321)
T ss_dssp             SCCHHHHHTSGGGGGC
T ss_pred             CcCHHHHhcChhhccC
Confidence            9999999999999864

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=1.6e-48  Score=367.34  Aligned_cols=283  Identities=27%  Similarity=0.442  Sum_probs=224.3

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ..++|++.+.||+|+||.||+|++..+++.||||++....   .....+..|+.+++.+.      |+||+++++++.+.
T Consensus        23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~   96 (331)
T 4aaa_A           23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLR------HENLVNLLEVCKKK   96 (331)
T ss_dssp             CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCC------CTTBCCEEEEEEET
T ss_pred             hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCC------CCCEeeEEEEeecC
Confidence            3468999999999999999999999999999999986432   22344667888888875      59999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+                 
T Consensus        97 ~~~~lv~e~~~~~~l~~~~~~~~--~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~-----------------  157 (331)
T 4aaa_A           97 KRWYLVFEFVDHTILDDLELFPN--GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV-----------------  157 (331)
T ss_dssp             TEEEEEEECCSEEHHHHHHHSTT--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-----------------
T ss_pred             CEEEEEEecCCcchHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEE-----------------
Confidence            9999999999 667777766544  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                             +.++.+||+|||++.....   ......||+.|+|||++.+. .++.++|||||||++|+|++|..||.+.+.
T Consensus       158 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  230 (331)
T 4aaa_A          158 -------SQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSD  230 (331)
T ss_dssp             -------CTTSCEEECCCTTC------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             -------cCCCcEEEEeCCCceeecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence                   4567899999999865332   23456799999999999876 789999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+....+....+..++.............     ...+|.....              .......+.++..+.+||.+||
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~--------------~~~~~~~~~~~~~l~~li~~~L  291 (331)
T 4aaa_A          231 IDQLYHIMMCLGNLIPRHQELFNKNPVFA-----GVRLPEIKER--------------EPLERRYPKLSEVVIDLAKKCL  291 (331)
T ss_dssp             HHHHHHHHHHHCSCCHHHHHHHHHCGGGT-----TCCCCCCSSC--------------CCHHHHSTTSCHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCChhhhhHhhhccccc-----cccCcccccc--------------chhhhcccchhHHHHHHHHHHh
Confidence            99999998888887766544332221110     0011110000              0011223467889999999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCC
Q 015867          376 RYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +.||.+|||++|+|+||||+..
T Consensus       292 ~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          292 HIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             CSSGGGSCCGGGGGGSHHHHGG
T ss_pred             ccCcccCCCHHHHhcCchhccC
Confidence            9999999999999999999863

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=6e-49  Score=361.66  Aligned_cols=260  Identities=28%  Similarity=0.501  Sum_probs=217.8

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-------hhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++.....       ....+..|+.+++.+.      |+||++++++
T Consensus         3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~   76 (283)
T 3bhy_A            3 VEDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR------HPNIITLHDI   76 (283)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC------CTTBCCEEEE
T ss_pred             hhhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCC------CCCeeehhhe
Confidence            34679999999999999999999999999999999875321       2456778999998885      5999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +.+.+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+|+||||+||+++.++         
T Consensus        77 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~---------  145 (283)
T 3bhy_A           77 FENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN---------  145 (283)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSS---------
T ss_pred             ecCCCeEEEEEeecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCC---------
Confidence            99999999999999 899999998765  599999999999999999999999999999999999996543         


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                 .....++|+|||++.....  ......||+.|+|||++.+..++.++||||||+++|+|++|..||.+.
T Consensus       146 -----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  214 (283)
T 3bhy_A          146 -----------VPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGE  214 (283)
T ss_dssp             -----------SSSCCEEECCCTTCEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             -----------CCCCceEEEecccceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCc
Confidence                       2345799999999876432  234557999999999999999999999999999999999999999988


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+....+.......+..                                              ..+.++..+.+||.+
T Consensus       215 ~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~li~~  248 (283)
T 3bhy_A          215 TKQETLTNISAVNYDFDEE----------------------------------------------YFSNTSELAKDFIRR  248 (283)
T ss_dssp             SHHHHHHHHHTTCCCCCHH----------------------------------------------HHTTCCHHHHHHHHT
T ss_pred             chHHHHHHhHhcccCCcch----------------------------------------------hcccCCHHHHHHHHH
Confidence            7776666654433222221                                              123557788999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||..||.+|||+.|+++||||+++
T Consensus       249 ~l~~dp~~Rps~~~~l~h~~~~~~  272 (283)
T 3bhy_A          249 LLVKDPKRRMTIAQSLEHSWIKAI  272 (283)
T ss_dssp             TSCSSGGGSCCHHHHHHCHHHHHH
T ss_pred             HccCCHhHCcCHHHHHhCHHHHHH
Confidence            999999999999999999999875

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=5.9e-48  Score=357.69  Aligned_cols=260  Identities=30%  Similarity=0.512  Sum_probs=218.4

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----------hhhHHHHHHHHHHHHhhhcCCCCCccee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----------KYRDAAMIEIDVLQHLAKNDKGGSSHCV  131 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~e~~~l~~l~~~~~~~~~~iv  131 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||||++....          .....+..|+++++.+.     +||||+
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~   87 (298)
T 1phk_A           13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS-----GHPNII   87 (298)
T ss_dssp             --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT-----TCTTBC
T ss_pred             cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhc-----CCCCEe
Confidence            345678999999999999999999999999999999996432          22355677888888885     369999


Q ss_pred             eeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccC
Q 015867          132 QIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       132 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~  210 (399)
                      ++++++...+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+|+||||+||++        
T Consensus        88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~--------  157 (298)
T 1phk_A           88 QLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL--------  157 (298)
T ss_dssp             CEEEEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE--------
T ss_pred             eeeeeeccCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEE--------
Confidence            9999999999999999999 899999998765  59999999999999999999999999999999999999        


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhh------CCCCCCcchhHHHHHHHHH
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVIL------GLGWSYPCDMWSVGCILVE  282 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~------~~~~~~~~DiwslG~il~e  282 (399)
                                      +.++.++|+|||++.....  ......||+.|+|||++.      ...++.++||||||+++|+
T Consensus       158 ----------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~  221 (298)
T 1phk_A          158 ----------------DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYT  221 (298)
T ss_dssp             ----------------CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHH
T ss_pred             ----------------cCCCcEEEecccchhhcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHH
Confidence                            3466799999998865432  234567999999999986      4568899999999999999


Q ss_pred             HHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh
Q 015867          283 LCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR  362 (399)
Q Consensus       283 ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (399)
                      |++|..||...+..+....+......++.                                              ...+.
T Consensus       222 l~~g~~p~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~  255 (298)
T 1phk_A          222 LLAGSPPFWHRKQMLMLRMIMSGNYQFGS----------------------------------------------PEWDD  255 (298)
T ss_dssp             HHHSSCSSCCSSHHHHHHHHHHTCCCCCT----------------------------------------------TTGGG
T ss_pred             HHHCCCCCcCccHHHHHHHHhcCCcccCc----------------------------------------------ccccc
Confidence            99999999887776666655443222111                                              11235


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       363 ~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ++..+.+||.+||+.||.+|||+.|+++||||++..
T Consensus       256 ~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          256 YSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             SCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            678899999999999999999999999999999864

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=1.3e-48  Score=371.20  Aligned_cols=281  Identities=28%  Similarity=0.523  Sum_probs=223.8

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +.++|.+.+.||+|+||.||+|.+..+|+.||||++....   .....+..|+.+++.+.      |+||+++++++...
T Consensus        22 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~   95 (353)
T 3coi_A           22 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ------HENVIGLLDVFTPA   95 (353)
T ss_dssp             EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCC------CTTBCCCSEEECSC
T ss_pred             cCceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcC------CCCcccHhheEecc
Confidence            4578999999999999999999999999999999986432   23455677888888875      59999999999876


Q ss_pred             Ce------EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          141 NH------ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       141 ~~------~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      +.      +|+||||++++|.+++..    .+++..+..++.||+.||+|||++||+||||||+|||+            
T Consensus        96 ~~~~~~~~~~lv~e~~~~~l~~~~~~----~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~------------  159 (353)
T 3coi_A           96 SSLRNFYDFYLVMPFMQTDLQKIMGL----KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV------------  159 (353)
T ss_dssp             SSGGGCCCCEEEEECCSEEGGGTTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEE------------
T ss_pred             cccccceeEEEEeccccCCHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeE------------
Confidence            53      599999998888877642    49999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                  +.++.+||+|||++...........||+.|+|||++.+ ..++.++|||||||++|+|++|..||.+.
T Consensus       160 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~  227 (353)
T 3coi_A          160 ------------NEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGK  227 (353)
T ss_dssp             ------------CTTCCEEECSTTCTTC--------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSS
T ss_pred             ------------CCCCcEEEeecccccCCCCCccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                        44677999999999876666667789999999999987 67999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+.+..+.+..+.++..++..........+...    +|.               ..........+.++.++.+||.+
T Consensus       228 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~~~~~~~~~~~~li~~  288 (353)
T 3coi_A          228 DYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQS----LPQ---------------TPRKDFTQLFPRASPQAADLLEK  288 (353)
T ss_dssp             CHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHT----SCB---------------CSSCCTTTTCTTSCHHHHHHHHH
T ss_pred             CHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHh----CcC---------------CCCccHHHhcCCcCHHHHHHHHH
Confidence            99999999999988888776554332111100000    000               00000112234678899999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||+.||.+|||++|+++||||+..
T Consensus       289 ~L~~dp~~Rpt~~e~l~hp~f~~~  312 (353)
T 3coi_A          289 MLELDVDKRLTAAQALTHPFFEPF  312 (353)
T ss_dssp             HSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred             HcCCCcccCCCHHHHhcCcchhhc
Confidence            999999999999999999999875

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.9e-48  Score=365.82  Aligned_cols=262  Identities=23%  Similarity=0.412  Sum_probs=213.3

Q ss_pred             cCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        60 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ......++|++.+.||+|+||.||+|++..+++.||||++.........+..|+.+++.+.     .|+||+++++++..
T Consensus        18 ~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~-----~h~~i~~~~~~~~~   92 (326)
T 2x7f_A           18 ALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYS-----HHRNIATYYGAFIK   92 (326)
T ss_dssp             CCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHC-----CSTTBCCEEEEEEE
T ss_pred             hccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhcc-----CCCCeeeeeeEEee
Confidence            3345678899999999999999999999999999999999866556677888999998884     36999999999876


Q ss_pred             ------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          140 ------RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       140 ------~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                            .+..++||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+|||+          
T Consensus        93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~----------  162 (326)
T 2x7f_A           93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL----------  162 (326)
T ss_dssp             CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE----------
T ss_pred             ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEE----------
Confidence                  56899999999 7899999987654469999999999999999999999999999999999999          


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHH
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell  284 (399)
                                    +.++.++|+|||++......   .....||+.|+|||++.     +..++.++|||||||++|+|+
T Consensus       163 --------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~  228 (326)
T 2x7f_A          163 --------------TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA  228 (326)
T ss_dssp             --------------CTTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHH
T ss_pred             --------------cCCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHH
Confidence                          34667999999988764322   34567999999999997     567899999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       285 ~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                      +|..||...+.......+.....+                                                ......++
T Consensus       229 ~g~~p~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~  260 (326)
T 2x7f_A          229 EGAPPLCDMHPMRALFLIPRNPAP------------------------------------------------RLKSKKWS  260 (326)
T ss_dssp             HSSCTTTTSCHHHHHHHHHHSCCC------------------------------------------------CCSCSCSC
T ss_pred             hCCCCCCCCcHHHHHHHhhcCccc------------------------------------------------cCCccccC
Confidence            999999887766555444321100                                                00113457


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ..+.+||.+||..||.+|||+.++++||||++..
T Consensus       261 ~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  294 (326)
T 2x7f_A          261 KKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP  294 (326)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred             HHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence            7889999999999999999999999999998753

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=1.2e-48  Score=363.61  Aligned_cols=261  Identities=26%  Similarity=0.425  Sum_probs=218.8

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+|+.||||+++.... ....+..|+.+++.+.      ||||+++++++.+.
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~   78 (304)
T 2jam_A            5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK------HENIVTLEDIYEST   78 (304)
T ss_dssp             -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCC------CTTBCCEEEEEECS
T ss_pred             cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCC------CCCeeehhhhcccC
Confidence            3456789999999999999999999999999999999975432 2345677888888875      59999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++...+  .+++..+..++.||+.||.|||++||+|+||||+|||+..+              
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~--------------  142 (304)
T 2jam_A           79 THYYLVMQLVSGGELFDRILERG--VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP--------------  142 (304)
T ss_dssp             SEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSS--------------
T ss_pred             CEEEEEEEcCCCccHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecC--------------
Confidence            9999999999 899999998765  59999999999999999999999999999999999998432              


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                             +.++.++|+|||++..... ......||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+.
T Consensus       143 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  215 (304)
T 2jam_A          143 -------EENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKL  215 (304)
T ss_dssp             -------STTCCEEBCSCSTTCCCCCBTTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             -------CCCCCEEEccCCcceecCCCccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHH
Confidence                   3467899999999875433 23455799999999999999999999999999999999999999998777666


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+......++.                                              ...+.++.++.+||.+||..|
T Consensus       216 ~~~i~~~~~~~~~----------------------------------------------~~~~~~~~~~~~li~~~l~~d  249 (304)
T 2jam_A          216 FEKIKEGYYEFES----------------------------------------------PFWDDISESAKDFICHLLEKD  249 (304)
T ss_dssp             HHHHHHCCCCCCT----------------------------------------------TTTTTSCHHHHHHHHHHHCSS
T ss_pred             HHHHHcCCCCCCc----------------------------------------------cccccCCHHHHHHHHHHcCCC
Confidence            6666543222111                                              112356788999999999999


Q ss_pred             CCCCCCHHHHhCCccccCC
Q 015867          379 PSERLTARQALNHPFFRNL  397 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~  397 (399)
                      |.+|||+.|+++||||++.
T Consensus       250 p~~Rps~~~~l~h~~~~~~  268 (304)
T 2jam_A          250 PNERYTCEKALSHPWIDGN  268 (304)
T ss_dssp             TTTSCCHHHHHTSHHHHSS
T ss_pred             hhHCcCHHHHhcCccccCC
Confidence            9999999999999999864

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=3.3e-49  Score=373.84  Aligned_cols=262  Identities=26%  Similarity=0.421  Sum_probs=214.0

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch------hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      .+.++|++.+.||+|+||.||+|.+..+++.||+|++....      .....+..|+++++.+.      ||||++++++
T Consensus        23 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~   96 (345)
T 3hko_A           23 ELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH------HPNIARLYEV   96 (345)
T ss_dssp             HHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCC------CTTBCCEEEE
T ss_pred             hhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCC------CCCcceeehh
Confidence            34678999999999999999999999999999999996532      33456777888888885      5999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcC--------------------------------------CCCCCHHHHHHHHHH
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNK--------------------------------------YCPFPVDLVREFGRQ  177 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------------------------------~~~~~~~~~~~i~~q  177 (399)
                      +.+.+..++||||+ +++|.+++....                                      ...+++..++.++.|
T Consensus        97 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~q  176 (345)
T 3hko_A           97 YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQ  176 (345)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHH
T ss_pred             hccCCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHH
Confidence            99999999999999 999999985210                                      112467788899999


Q ss_pred             HHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-------CCccc
Q 015867          178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-------NHSSI  250 (399)
Q Consensus       178 i~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~  250 (399)
                      |+.||+|||++||+||||||+|||++.+                      ....+||+|||++.....       .....
T Consensus       177 i~~~l~~LH~~~ivH~Dlkp~NIll~~~----------------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  234 (345)
T 3hko_A          177 IFSALHYLHNQGICHRDIKPENFLFSTN----------------------KSFEIKLVDFGLSKEFYKLNNGEYYGMTTK  234 (345)
T ss_dssp             HHHHHHHHHHTTEECCCCCGGGEEESCS----------------------SSCCEEECCCTTCEEGGGTTCC--------
T ss_pred             HHHHHHHHHHCCccccCCChhhEEEecC----------------------CCceEEEeeccccccccccCcccccccccc
Confidence            9999999999999999999999999532                      234799999999864211       12456


Q ss_pred             ccCCCccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCC
Q 015867          251 VSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRG  328 (399)
Q Consensus       251 ~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~  328 (399)
                      .||+.|+|||++.+  ..++.++|||||||++|+|++|..||.+.+..+....+......++.                 
T Consensus       235 ~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~-----------------  297 (345)
T 3hko_A          235 AGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFEN-----------------  297 (345)
T ss_dssp             CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTS-----------------
T ss_pred             CCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCC-----------------
Confidence            79999999999975  67899999999999999999999999988887777666543222111                 


Q ss_pred             cccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          329 SRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       329 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                                                   .....++.++.+||.+||+.||.+|||+.|+|+||||+++.
T Consensus       298 -----------------------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~  338 (345)
T 3hko_A          298 -----------------------------PNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS  338 (345)
T ss_dssp             -----------------------------GGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred             -----------------------------cccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence                                         11234678899999999999999999999999999999874

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=3.3e-48  Score=366.95  Aligned_cols=253  Identities=29%  Similarity=0.441  Sum_probs=203.5

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ..++|++.+.||+|+||.||+|.+ .+++.||||++....   .....+..|+.+++.+.+    .++||+++++++.+.
T Consensus         7 ~~~~y~i~~~lG~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~----~~~~iv~~~~~~~~~   81 (343)
T 3dbq_A            7 KGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ----HSDKIIRLYDYEITD   81 (343)
T ss_dssp             SSCEEEEEEEESCCSSEEEEEEEC-TTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT----TCTTBCCEEEEEECS
T ss_pred             ecCEEEEEEEEecCCCeEEEEEEe-CCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhh----cCCceEEEeeeEeeC
Confidence            356799999999999999999987 468899999997432   233567789999999975    348999999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          141 NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       141 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      +..++|||+.+++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++                 
T Consensus        82 ~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-----------------  142 (343)
T 3dbq_A           82 QYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-----------------  142 (343)
T ss_dssp             SEEEEEECCCSEEHHHHHHHSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-----------------
T ss_pred             CEEEEEEeCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-----------------
Confidence            9999999977999999999866  699999999999999999999999999999999999993                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhC-----------CCCCCcchhHHHHHHHHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILG-----------LGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwslG~il~ell  284 (399)
                              ++.+||+|||++......     ....+||+.|+|||++.+           ..++.++|||||||++|+|+
T Consensus       143 --------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell  214 (343)
T 3dbq_A          143 --------DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMT  214 (343)
T ss_dssp             --------TTEEEECCCSSSCCC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHH
T ss_pred             --------CCcEEEeecccccccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHH
Confidence                    356999999998764332     235679999999999975           67899999999999999999


Q ss_pred             hCCCCCCCCCcH-HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhh
Q 015867          285 TGEALFQTHENL-EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA  363 (399)
Q Consensus       285 ~g~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (399)
                      +|..||...... .....+..   .                   .....+                          +...
T Consensus       215 ~g~~pf~~~~~~~~~~~~~~~---~-------------------~~~~~~--------------------------~~~~  246 (343)
T 3dbq_A          215 YGKTPFQQIINQISKLHAIID---P-------------------NHEIEF--------------------------PDIP  246 (343)
T ss_dssp             HSSCTTTTCCSHHHHHHHHHC---T-------------------TSCCCC--------------------------CCCS
T ss_pred             hCCCcchhhhhHHHHHHHHhc---C-------------------CcccCC--------------------------cccC
Confidence            999999764332 22211110   0                   001111                          2334


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          364 RSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       364 ~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       247 ~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~  279 (343)
T 3dbq_A          247 EKDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  279 (343)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHHhCccccc
Confidence            567899999999999999999999999999974

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=9.7e-48  Score=364.92  Aligned_cols=286  Identities=28%  Similarity=0.453  Sum_probs=223.4

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ...+.++|++.+.||+|+||.||+|.+..+|+.||||++....  .....+..|+++++.+.      |+||+++++++.
T Consensus         6 ~~~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~   79 (353)
T 2b9h_A            6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK------HENIITIFNIQR   79 (353)
T ss_dssp             CCCSCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCC------CTTBCCEEEECC
T ss_pred             ccccccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCc------CCCcCCeeeeec
Confidence            4556789999999999999999999999999999999996432  23445667888888875      599999998876


Q ss_pred             cC-----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          139 YR-----NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       139 ~~-----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      ..     ...++||||++++|.+++...   .+++..+..++.||+.||+|||++||+||||||+|||+           
T Consensus        80 ~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~-----------  145 (353)
T 2b9h_A           80 PDSFENFNEVYIIQELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI-----------  145 (353)
T ss_dssp             CSCSTTCCCEEEEECCCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE-----------
T ss_pred             ccccCccceEEEEEeccCccHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEE-----------
Confidence            53     689999999988999999874   49999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC-------------CcccccCCCccchhhhhC-CCCCCcchhHHHHHH
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-------------HSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCI  279 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~i  279 (399)
                                   +.++.+||+|||++......             ....+||+.|+|||++.+ ..++.++|||||||+
T Consensus       146 -------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~i  212 (353)
T 2b9h_A          146 -------------NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCI  212 (353)
T ss_dssp             -------------CTTCCEEECCCTTCEECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHH
T ss_pred             -------------cCCCcEEEEecccccccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHH
Confidence                         44677999999988653321             123578999999999875 679999999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhh-hhhhhc
Q 015867          280 LVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL-KNMVSL  358 (399)
Q Consensus       280 l~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~  358 (399)
                      +|+|++|..||.+.+..+.+..+....+.++....                   ................... ......
T Consensus       213 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (353)
T 2b9h_A          213 LAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDND-------------------LRCIESPRAREYIKSLPMYPAAPLEK  273 (353)
T ss_dssp             HHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTT-------------------TTTCCCHHHHHHHHTSCCCCCCCHHH
T ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhcc-------------------ccccccchhhHHhhcccCCCCcchhh
Confidence            99999999999999988888888877665542100                   0000001111111100000 000112


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ..+.++.++.+||.+||+.||.+|||+.|+++||||+...
T Consensus       274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (353)
T 2b9h_A          274 MFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYH  313 (353)
T ss_dssp             HSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             hcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccC
Confidence            2356788999999999999999999999999999998763

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=7.6e-49  Score=379.66  Aligned_cols=293  Identities=26%  Similarity=0.473  Sum_probs=211.0

Q ss_pred             CccCCCEEEE-eeeccccceEEEEEEEc--cCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKIL-SKMGEGTFGRVLECWDR--QTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~-~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+.+.|++. ++||+|+||+||+|++.  .+++.||||++.... ....+..|+.+++.+.      ||||+++++++.
T Consensus        16 ~~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~E~~~l~~l~------hpniv~~~~~~~   88 (405)
T 3rgf_A           16 ERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG-ISMSACREIALLRELK------HPNVISLQKVFL   88 (405)
T ss_dssp             CCHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS-CCHHHHHHHHHHHHCC------CTTBCCCCEEEE
T ss_pred             hhhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC-CCHHHHHHHHHHHhcC------CCCeeeEeeEEe
Confidence            4455678884 57999999999999965  568899999986532 2346778999999985      599999999994


Q ss_pred             --cCCeEEEEEccCCCCHHHHHHhcC-------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccccc
Q 015867          139 --YRNHICIVFEKLGPSLFDFLKRNK-------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK  209 (399)
Q Consensus       139 --~~~~~~lv~e~~~~~L~~~l~~~~-------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~  209 (399)
                        .....|+||||++++|.+++....       ...+++..++.++.||+.||.|||++||+||||||+||||..++   
T Consensus        89 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~---  165 (405)
T 3rgf_A           89 SHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEG---  165 (405)
T ss_dssp             ETTTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSS---
T ss_pred             cCCCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCC---
Confidence              477999999999889999886321       12499999999999999999999999999999999999995432   


Q ss_pred             CCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC------CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHH
Q 015867          210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ------NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVE  282 (399)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~e  282 (399)
                                       +.++.+||+|||++.....      .....+||+.|+|||++.+. .++.++|||||||++|+
T Consensus       166 -----------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~e  228 (405)
T 3rgf_A          166 -----------------PERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAE  228 (405)
T ss_dssp             -----------------TTTTCEEECCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHH
T ss_pred             -----------------CCCCcEEEEECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHH
Confidence                             3567899999999876432      22456899999999999875 59999999999999999


Q ss_pred             HHhCCCCCCCCCc---------HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhh----
Q 015867          283 LCTGEALFQTHEN---------LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL----  349 (399)
Q Consensus       283 ll~g~~Pf~~~~~---------~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~----  349 (399)
                      |++|.+||.+...         .+.+..|....+.++...|.........                ......+...    
T Consensus       229 ll~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~  292 (405)
T 3rgf_A          229 LLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEH----------------STLMKDFRRNTYTN  292 (405)
T ss_dssp             HHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTH----------------HHHHHHCCGGGGTT
T ss_pred             HHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcch----------------hhhhhhccccCCCc
Confidence            9999999976554         4778888888877765433322111000                0000000000    


Q ss_pred             hhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ..............+..+.+||.+||+.||.+|||++|+|+||||++.
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~  340 (405)
T 3rgf_A          293 CSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLED  340 (405)
T ss_dssp             CCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSS
T ss_pred             chhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccC
Confidence            000001111222347788999999999999999999999999999874

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=3.5e-48  Score=362.46  Aligned_cols=286  Identities=27%  Similarity=0.470  Sum_probs=221.7

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec-
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD-  138 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~-  138 (399)
                      +..+.++|++.+.||+|+||.||+|.+..+++.||||++.... .....+..|+++++.+.      |+||+++++++. 
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~   79 (320)
T 2i6l_A            6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLD------HDNIVKVFEILGP   79 (320)
T ss_dssp             CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCC------CTTBCCEEEEECT
T ss_pred             cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcC------CCCeeEEEEeccc
Confidence            4567789999999999999999999999999999999986533 33455677888888774      699999998873 


Q ss_pred             -------------cCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeec
Q 015867          139 -------------YRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSS  205 (399)
Q Consensus       139 -------------~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~  205 (399)
                                   ..+..++||||++++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||++. 
T Consensus        80 ~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-  155 (320)
T 2i6l_A           80 SGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG---PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT-  155 (320)
T ss_dssp             TSCBCCC----CCSCSEEEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEET-
T ss_pred             cccccccccccccccCceeEEeeccCCCHHHHhhcC---CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcC-
Confidence                         34688999999988999999753   4999999999999999999999999999999999999942 


Q ss_pred             ccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC------CCcccccCCCccchhhhhC-CCCCCcchhHHHHH
Q 015867          206 EFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ------NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGC  278 (399)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~  278 (399)
                                            .++.+||+|||++.....      ......||..|+|||++.+ ..++.++||||||+
T Consensus       156 ----------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~  213 (320)
T 2i6l_A          156 ----------------------EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGC  213 (320)
T ss_dssp             ----------------------TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHH
T ss_pred             ----------------------CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHH
Confidence                                  356799999999876432      2234567999999999876 67999999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          279 ILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       279 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      ++|+|++|+.||.+.+..+....+...........+.........+....                    ..........
T Consensus       214 il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~  273 (320)
T 2i6l_A          214 IFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRND--------------------MTEPHKPLTQ  273 (320)
T ss_dssp             HHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHH--------------------TTSCCCCHHH
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCccccccc--------------------ccCCCCChhH
Confidence            99999999999999998888888888776666554444322211111000                    0000000112


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ..+.++.++.+||.+||+.||.+|||++|+++||||+...
T Consensus       274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  313 (320)
T 2i6l_A          274 LLPGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSIYS  313 (320)
T ss_dssp             HSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHTSHHHHTTC
T ss_pred             hcchhhHHHHHHHHHHcCCCccccCCHHHHhCCccccccc
Confidence            2346788999999999999999999999999999998753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=3.8e-48  Score=356.68  Aligned_cols=251  Identities=25%  Similarity=0.433  Sum_probs=214.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++.+.||+|+||.||+|.+..+++.||||++....    .....+..|+++++.+.      |+||+++++++.+.
T Consensus        13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~   86 (284)
T 2vgo_A           13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR------HPNILRMYNYFHDR   86 (284)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC------CTTBCCEEEEEECS
T ss_pred             hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCC------CCCEeeEEEEEEcC
Confidence            467999999999999999999999999999999996532    12345667888887774      69999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++...+  .+++..+..++.||+.||.|||++||+|+||||+||++                 
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~-----------------  147 (284)
T 2vgo_A           87 KRIYLMLEFAPRGELYKELQKHG--RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM-----------------  147 (284)
T ss_dssp             SEEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEE-----------------
T ss_pred             CEEEEEEEeCCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEE-----------------
Confidence            9999999999 889999998765  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                             +.++.++|+|||++..... ......||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+.
T Consensus       148 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  220 (284)
T 2vgo_A          148 -------GYKGELKIADFGWSVHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTET  220 (284)
T ss_dssp             -------CTTCCEEECCCTTCEECSSSCBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHH
T ss_pred             -------cCCCCEEEecccccccCcccccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHH
Confidence                   3466799999998865433 33456799999999999999999999999999999999999999988776665


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+......                                                  .++.++.++.+||.+||+.|
T Consensus       221 ~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~li~~~l~~~  250 (284)
T 2vgo_A          221 HRRIVNVDLK--------------------------------------------------FPPFLSDGSKDLISKLLRYH  250 (284)
T ss_dssp             HHHHHTTCCC--------------------------------------------------CCTTSCHHHHHHHHHHSCSS
T ss_pred             HHHHhccccC--------------------------------------------------CCCcCCHHHHHHHHHHhhcC
Confidence            5544332111                                                  12345778899999999999


Q ss_pred             CCCCCCHHHHhCCccccCC
Q 015867          379 PSERLTARQALNHPFFRNL  397 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~  397 (399)
                      |.+|||+.++++||||++.
T Consensus       251 p~~Rps~~~ll~h~~~~~~  269 (284)
T 2vgo_A          251 PPQRLPLKGVMEHPWVKAN  269 (284)
T ss_dssp             GGGSCCHHHHHTCHHHHHH
T ss_pred             HhhCCCHHHHhhCHHHHhh
Confidence            9999999999999999863

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=2.8e-48  Score=365.01  Aligned_cols=252  Identities=26%  Similarity=0.352  Sum_probs=200.6

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      +.++|++.+.||+|+||.||+|++..+++.||||+++...  .....+..|+++++.+.      ||||+++++++.+.+
T Consensus         4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~~   77 (332)
T 3qd2_B            4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE------HPGIVRYFNAWLETP   77 (332)
T ss_dssp             HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCC------CTTBCCEEEEEEECC
T ss_pred             hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCC------CCCEeeEEEEEEEec
Confidence            4467999999999999999999999999999999997432  33456777888887774      699999999875432


Q ss_pred             ---------------------------------------------------------eEEEEEccC-CCCHHHHHHhcCC
Q 015867          142 ---------------------------------------------------------HICIVFEKL-GPSLFDFLKRNKY  163 (399)
Q Consensus       142 ---------------------------------------------------------~~~lv~e~~-~~~L~~~l~~~~~  163 (399)
                                                                               +.++||||+ +++|.+++.....
T Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~  157 (332)
T 3qd2_B           78 PEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS  157 (332)
T ss_dssp             SCHHHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS
T ss_pred             cchhhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC
Confidence                                                                     489999999 9999999987543


Q ss_pred             -CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCccc
Q 015867          164 -CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       164 -~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                       ...++..+..++.||+.||+|||++||+||||||+|||+                        +.++.+||+|||++..
T Consensus       158 ~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll------------------------~~~~~~kL~DfG~a~~  213 (332)
T 3qd2_B          158 LEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFF------------------------TMDDVVKVGDFGLVTA  213 (332)
T ss_dssp             GGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE------------------------CTTCCEEECCCTTCEE
T ss_pred             ccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEE------------------------eCCCCEEEeecCcccc
Confidence             235666789999999999999999999999999999999                        3466899999999876


Q ss_pred             CCCC---------------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHH-h
Q 015867          243 DNQN---------------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA-L  306 (399)
Q Consensus       243 ~~~~---------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~-~  306 (399)
                      ....               ....+||+.|+|||++.+..++.++|||||||++|+|++|..|+.     +....+... .
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~-----~~~~~~~~~~~  288 (332)
T 3qd2_B          214 MDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM-----ERVRIITDVRN  288 (332)
T ss_dssp             CSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH-----HHHHHHHHHHT
T ss_pred             cccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh-----HHHHHHHHhhc
Confidence            4332               234579999999999999999999999999999999999877652     111111111 1


Q ss_pred             CCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHH
Q 015867          307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTAR  386 (399)
Q Consensus       307 ~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  386 (399)
                      ...|.                                               .....++++.+||.+||+.||.+|||+.
T Consensus       289 ~~~~~-----------------------------------------------~~~~~~~~~~~li~~~l~~~p~~Rps~~  321 (332)
T 3qd2_B          289 LKFPL-----------------------------------------------LFTQKYPQEHMMVQDMLSPSPTERPEAT  321 (332)
T ss_dssp             TCCCH-----------------------------------------------HHHHHCHHHHHHHHHHHCSSGGGSCCHH
T ss_pred             cCCCc-----------------------------------------------ccccCChhHHHHHHHHccCCCCcCCCHH
Confidence            11111                                               1134566778999999999999999999


Q ss_pred             HHhCCccccCC
Q 015867          387 QALNHPFFRNL  397 (399)
Q Consensus       387 ell~hp~f~~~  397 (399)
                      |+++||||+++
T Consensus       322 ~~l~~~~f~~~  332 (332)
T 3qd2_B          322 DIIENAIFENL  332 (332)
T ss_dssp             HHHHSTTCCCC
T ss_pred             HHhhchhhhcC
Confidence            99999999985

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=1e-48  Score=372.91  Aligned_cols=300  Identities=24%  Similarity=0.337  Sum_probs=215.1

Q ss_pred             cCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        60 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++...++|++.+.||+|+||.||+|.+..+++.||+|++...  ......+..|+.+++.+      .|+||+++++++
T Consensus        27 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~  100 (360)
T 3eqc_A           27 VGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------NSPYIVGFYGAF  100 (360)
T ss_dssp             CCCCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGC------CCTTBCCEEEEE
T ss_pred             ccccccccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHC------CCCCEEEEeEEE
Confidence            4556678899999999999999999999999999999999753  22334556666666655      469999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      .+.+..++||||+ +++|.+++...+  .+++..+..++.||+.||.|||++ ||+||||||+|||+             
T Consensus       101 ~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~-------------  165 (360)
T 3eqc_A          101 YSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV-------------  165 (360)
T ss_dssp             EETTEEEEEECCCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE-------------
T ss_pred             EECCEEEEEEECCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEE-------------
Confidence            9999999999999 889999998866  599999999999999999999996 99999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccC-CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                                 +.++.++|+|||++... ........||+.|+|||++.+..++.++|||||||++|+|++|..||...+
T Consensus       166 -----------~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~  234 (360)
T 3eqc_A          166 -----------NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPD  234 (360)
T ss_dssp             -----------CTTCCEEECCCCCCHHHHHHC----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCC
T ss_pred             -----------CCCCCEEEEECCCCcccccccccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                       44667999999987542 223345689999999999999999999999999999999999999998877


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....+.......+.......... ...+..-.....+... ..+......    ...........++.++.+||.+|
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~~~~~~~li~~~  308 (360)
T 3eqc_A          235 AKELELMFGCQVEGDAAETPPRPRTP-GRPLNKFGMDSRPPMA-IFELLDYIV----NEPPPKLPSGVFSLEFQDFVNKC  308 (360)
T ss_dssp             HHHHHHHHC-------------------------------CCC-HHHHHHHHH----HSCCCCCCTTTSCHHHHHHHHHH
T ss_pred             HHHHHHHhcccccccCCCCCCCcccC-CCcccccccCCCCccc-chhhhhHHh----ccCCCCCCcccccHHHHHHHHHH
Confidence            65544433221111111100000000 0000000000000000 000000000    00111122245688999999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      |+.||.+|||++|+|+||||++.
T Consensus       309 L~~dP~~Rpt~~ell~hp~~~~~  331 (360)
T 3eqc_A          309 LIKNPAERADLKQLMVHAFIKRS  331 (360)
T ss_dssp             HCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             hhcChhhCCCHHHHhhChHhhcc
Confidence            99999999999999999999864

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=2.7e-50  Score=386.14  Aligned_cols=249  Identities=19%  Similarity=0.242  Sum_probs=200.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeec------
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR------  134 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~------  134 (399)
                      .++|++.+.||+|+||.||+|++..+|+.||||++...    ......+..|+.+++.+..   ..||||++++      
T Consensus        72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~---l~hpniv~~~~~~~~~  148 (377)
T 3byv_A           72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRG---IKNQKQAKVHLRFIFP  148 (377)
T ss_dssp             CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTT---CCSHHHHHHHHCBCCC
T ss_pred             CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccc---cCCHHHHHHHhhhhhh
Confidence            46899999999999999999999889999999999642    2234556677766655543   4689999988      


Q ss_pred             -eeeccCC-----------------eEEEEEccCCCCHHHHHHhcCCCCCC-------HHHHHHHHHHHHHHHHHHHHCC
Q 015867          135 -NWFDYRN-----------------HICIVFEKLGPSLFDFLKRNKYCPFP-------VDLVREFGRQLLESVAYMHDLR  189 (399)
Q Consensus       135 -~~~~~~~-----------------~~~lv~e~~~~~L~~~l~~~~~~~~~-------~~~~~~i~~qi~~~L~~lH~~g  189 (399)
                       +++.+.+                 ..|+||||++|+|.+++...+  .++       +..+..|+.||+.||+|||++|
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~--~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~  226 (377)
T 3byv_A          149 FDLVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLL--SHSSTHKSLVHHARLQLTLQVIRLLASLHHYG  226 (377)
T ss_dssp             SEEEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHH--HTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             hhhhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhcc--ccccccccccHHHHHHHHHHHHHHHHHHHhCC
Confidence             5555443                 389999999889999998653  244       4788889999999999999999


Q ss_pred             ccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCC----
Q 015867          190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL----  265 (399)
Q Consensus       190 ivH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~----  265 (399)
                      |+||||||+|||+                        +.++.+||+|||++..........+| +.|+|||++.+.    
T Consensus       227 ivHrDikp~NIll------------------------~~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~  281 (377)
T 3byv_A          227 LVHTYLRPVDIVL------------------------DQRGGVFLTGFEHLVRDGARVVSSVS-RGFEPPELEARRATIS  281 (377)
T ss_dssp             EECSCCCGGGEEE------------------------CTTCCEEECCGGGCEETTCEEECCCC-TTCCCHHHHHHHTSTH
T ss_pred             eecCCCCHHHEEE------------------------cCCCCEEEEechhheecCCcccCCCC-cCccChhhhccccccc
Confidence            9999999999999                        44678999999999876666667788 999999999987    


Q ss_pred             -------CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCcc
Q 015867          266 -------GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAV  338 (399)
Q Consensus       266 -------~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~  338 (399)
                             .++.++|||||||++|+|++|+.||.+.+..+....+                                    
T Consensus       282 ~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~------------------------------------  325 (377)
T 3byv_A          282 YHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI------------------------------------  325 (377)
T ss_dssp             HHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGG------------------------------------
T ss_pred             ccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhh------------------------------------
Confidence                   8999999999999999999999999654321110000                                    


Q ss_pred             chHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          339 SRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                                        ....+.++.++.+||.+||+.||.+|||+.|+++||||+++
T Consensus       326 ------------------~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          326 ------------------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             ------------------GSSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             ------------------hhhccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence                              01113567889999999999999999999999999999875

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-48  Score=369.52  Aligned_cols=257  Identities=26%  Similarity=0.436  Sum_probs=207.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc---cCCeEEEEEEEecch-----hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR---QTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      .++|++.+.||+|+||.||+|++.   .+++.||||+++...     .....+..|+++++.+.     +|+||++++++
T Consensus        53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~~  127 (355)
T 1vzo_A           53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIR-----QSPFLVTLHYA  127 (355)
T ss_dssp             GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHH-----TCTTBCCEEEE
T ss_pred             ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHcc-----CCCceeEEEEE
Confidence            368999999999999999999984   579999999986422     23355667999999986     36899999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +...+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+             
T Consensus       128 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll-------------  192 (355)
T 1vzo_A          128 FQTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL-------------  192 (355)
T ss_dssp             EEETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-------------
T ss_pred             EeeCceEEEEeecCCCCCHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE-------------
Confidence            99999999999999 899999998765  59999999999999999999999999999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCC----CCcccccCCCccchhhhhC--CCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ----NHSSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----~~~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                 +.++.+||+|||++.....    .....+||+.|+|||++.+  ..++.++|||||||++|+|++|..|
T Consensus       193 -----------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~p  261 (355)
T 1vzo_A          193 -----------DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP  261 (355)
T ss_dssp             -----------CTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCT
T ss_pred             -----------CCCCcEEEeeCCCCeecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCC
Confidence                       4567899999998865322    2234679999999999986  3578999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |...........+....                                              .......+..++..+.+
T Consensus       262 f~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~~~~~  295 (355)
T 1vzo_A          262 FTVDGEKNSQAEISRRI----------------------------------------------LKSEPPYPQEMSALAKD  295 (355)
T ss_dssp             TSCTTSCCCHHHHHHHH----------------------------------------------HHCCCCCCTTSCHHHHH
T ss_pred             CccCCccchHHHHHHHH----------------------------------------------hccCCCCCcccCHHHHH
Confidence            97543221111111100                                              00001122456778899


Q ss_pred             HHHHccccCCCCCC-----CHHHHhCCccccCCC
Q 015867          370 LLHGLLRYDPSERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       370 li~~~L~~dP~~R~-----t~~ell~hp~f~~~~  398 (399)
                      ||.+||..||.+||     |+.|+++||||++++
T Consensus       296 li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~~  329 (355)
T 1vzo_A          296 LIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  329 (355)
T ss_dssp             HHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             HHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcCC
Confidence            99999999999999     999999999999864

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=4.2e-48  Score=372.34  Aligned_cols=252  Identities=28%  Similarity=0.429  Sum_probs=204.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ..+|++.+.||+|+||.||+|.+.. ++.||||++....   .....+..|+.+++.+.+    .|+||+++++++...+
T Consensus        55 ~~~y~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~----~~~~iv~~~~~~~~~~  129 (390)
T 2zmd_A           55 GRIYSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ----HSDKIIRLYDYEITDQ  129 (390)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTT----TCTTBCCEEEEEECSS
T ss_pred             CCceEEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHccc----CCCeEEEEEEEEecCC
Confidence            3469999999999999999998765 8899999996532   334567889999999975    4689999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          142 HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       142 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .+|+|||+.+++|.+++....  .+++..+..++.||+.||+|||++||+||||||+|||+.                  
T Consensus       130 ~~~lv~E~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~------------------  189 (390)
T 2zmd_A          130 YIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV------------------  189 (390)
T ss_dssp             EEEEEEECCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES------------------
T ss_pred             EEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE------------------
Confidence            999999966999999998866  689999999999999999999999999999999999992                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhC-----------CCCCCcchhHHHHHHHHHHHh
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILG-----------LGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwslG~il~ell~  285 (399)
                             ++.+||+|||++......     ....+||+.|+|||++.+           ..++.++|||||||++|+|++
T Consensus       190 -------~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~  262 (390)
T 2zmd_A          190 -------DGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTY  262 (390)
T ss_dssp             -------SSCEEECCCSSSCCC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHH
T ss_pred             -------CCeEEEEecCccccccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHH
Confidence                   356999999998764332     245679999999999975           368999999999999999999


Q ss_pred             CCCCCCCCCcH-HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          286 GEALFQTHENL-EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       286 g~~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                      |..||...... ..+..+....                      ....+                          +...+
T Consensus       263 G~~Pf~~~~~~~~~~~~~~~~~----------------------~~~~~--------------------------~~~~~  294 (390)
T 2zmd_A          263 GKTPFQQIINQISKLHAIIDPN----------------------HEIEF--------------------------PDIPE  294 (390)
T ss_dssp             SSCTTTTCCCHHHHHHHHHCTT----------------------SCCCC--------------------------CCCSC
T ss_pred             CCCcchhhhHHHHHHHHHhCcc----------------------ccCCC--------------------------Cccch
Confidence            99999765432 2222221100                      00111                          12345


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      .++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       295 ~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~  326 (390)
T 2zmd_A          295 KDLQDVLKCCLKRDPKQRISIPELLAHPYVQI  326 (390)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHS
T ss_pred             HHHHHHHHHHcccChhhCCCHHHHhhCcCccc
Confidence            67899999999999999999999999999975

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=9.3e-49  Score=380.42  Aligned_cols=258  Identities=30%  Similarity=0.488  Sum_probs=203.3

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---------hhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      +.++|.+.+.||+|+||.||+|.+..+++.||||++.....         ....+..|+.+++.+.      ||||++++
T Consensus       133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~l~  206 (419)
T 3i6u_A          133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN------HPCIIKIK  206 (419)
T ss_dssp             HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCC------CTTBCCCC
T ss_pred             hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCC------CCCEeeEE
Confidence            45789999999999999999999999999999999975321         1124677899998885      59999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      +++.. +..|+||||+ +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++.++       
T Consensus       207 ~~~~~-~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~-------  276 (419)
T 3i6u_A          207 NFFDA-EDYYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE-------  276 (419)
T ss_dssp             EEEES-SEEEEEEECCTTCBGGGGTSSSC--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSS-------
T ss_pred             EEEec-CceEEEEEcCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCC-------
Confidence            98864 4579999999 999999887655  699999999999999999999999999999999999995432       


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhC---CCCCCcchhHHHHHHHHHHHhCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~g~~  288 (399)
                                    .+..+||+|||++......  ....+||+.|+|||++.+   ..++.++|||||||++|+|++|..
T Consensus       277 --------------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~  342 (419)
T 3i6u_A          277 --------------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYP  342 (419)
T ss_dssp             --------------SSCCEEECCSSTTTSCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSC
T ss_pred             --------------CcceEEEeecccceecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCC
Confidence                          3557999999998765433  346789999999999864   578899999999999999999999


Q ss_pred             CCCCCCcHH-HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHH
Q 015867          289 LFQTHENLE-HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL  367 (399)
Q Consensus       289 Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (399)
                      ||....... ....+......++.                                              ..+..++..+
T Consensus       343 pf~~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~~~~~  376 (419)
T 3i6u_A          343 PFSEHRTQVSLKDQITSGKYNFIP----------------------------------------------EVWAEVSEKA  376 (419)
T ss_dssp             SSCCCSSSCCHHHHHHTTCCCCCH----------------------------------------------HHHTTSCHHH
T ss_pred             CCCCCcchHHHHHHHhcCCCCCCc----------------------------------------------hhhcccCHHH
Confidence            997644322 22222222111111                                              1123567889


Q ss_pred             HHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          368 TDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .+||.+||+.||.+|||++|+|+||||++.
T Consensus       377 ~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          377 LDLVKKLLVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             HHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             HHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence            999999999999999999999999999874

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=8.3e-48  Score=356.21  Aligned_cols=254  Identities=29%  Similarity=0.447  Sum_probs=215.7

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ....++|++.+.||+|+||.||+|.+..+++.||+|++....    .....+..|+.+++.+.      |+||+++++++
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~   84 (294)
T 2rku_A           11 PRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLA------HQHVVGFHGFF   84 (294)
T ss_dssp             TTTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCC------CTTBCCEEEEE
T ss_pred             CCcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCC------CCCEeeeeeee
Confidence            345678999999999999999999999999999999986532    23455667777777764      69999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      .+.+..++||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||+              
T Consensus        85 ~~~~~~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~--------------  148 (294)
T 2rku_A           85 EDNDFVFVVLELCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFL--------------  148 (294)
T ss_dssp             ECSSEEEEEEECCTTCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE--------------
T ss_pred             ccCCEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEE--------------
Confidence            9999999999999 899999998765  59999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                +.++.++|+|||++....   .......||+.|+|||++.+..++.++||||||+++|+|++|..||...
T Consensus       149 ----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~  218 (294)
T 2rku_A          149 ----------NEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS  218 (294)
T ss_dssp             ----------CTTCCEEECCCTTCEECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred             ----------cCCCCEEEEeccCceecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence                      446779999999986533   2234567999999999999999999999999999999999999999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      ...+....+......                                                  .+..++..+.+||.+
T Consensus       219 ~~~~~~~~~~~~~~~--------------------------------------------------~~~~~~~~~~~li~~  248 (294)
T 2rku_A          219 CLKETYLRIKKNEYS--------------------------------------------------IPKHINPVAASLIQK  248 (294)
T ss_dssp             SHHHHHHHHHTTCCC--------------------------------------------------CCTTSCHHHHHHHHH
T ss_pred             CHHHHHHHHhhccCC--------------------------------------------------CccccCHHHHHHHHH
Confidence            766655444322111                                                  113456778999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||+.||.+|||++|+++||||++.
T Consensus       249 ~l~~~p~~Rps~~~ll~~~~~~~~  272 (294)
T 2rku_A          249 MLQTDPTARPTINELLNDEFFTSG  272 (294)
T ss_dssp             HTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred             HcccChhhCcCHHHHhhChheecC
Confidence            999999999999999999999874

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1e-48  Score=369.22  Aligned_cols=246  Identities=28%  Similarity=0.468  Sum_probs=208.3

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---------hhHHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---------YRDAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++.....         ....+..|+.+++.+.      |+||+++
T Consensus        21 ~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~Iv~~   94 (335)
T 3dls_A           21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE------HANIIKV   94 (335)
T ss_dssp             HHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCC------CTTBCCE
T ss_pred             ccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCC------CCCEeeE
Confidence            456789999999999999999999999999999999975431         2335667888888874      5999999


Q ss_pred             ceeeccCCeEEEEEccC-CC-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCC
Q 015867          134 RNWFDYRNHICIVFEKL-GP-SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~~-~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~  211 (399)
                      ++++.+.+..++||||+ ++ +|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||+         
T Consensus        95 ~~~~~~~~~~~lv~e~~~~g~~l~~~~~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll---------  163 (335)
T 3dls_A           95 LDIFENQGFFQLVMEKHGSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVI---------  163 (335)
T ss_dssp             EEEEECSSEEEEEEECCTTSCBHHHHHHTCC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---------
T ss_pred             EEEEeeCCEEEEEEEeCCCCccHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEE---------
Confidence            99999999999999998 55 9999998766  59999999999999999999999999999999999999         


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCC
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~  288 (399)
                                     +.++.+||+|||++......  ....+||+.|+|||++.+..+ +.++|||||||++|+|++|..
T Consensus       164 ---------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  228 (335)
T 3dls_A          164 ---------------AEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEEN  228 (335)
T ss_dssp             ---------------CTTSCEEECCCTTCEECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSC
T ss_pred             ---------------cCCCcEEEeecccceECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCC
Confidence                           44678999999998764332  345679999999999998876 889999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||.......                                                        ......+..++.++.
T Consensus       229 pf~~~~~~~--------------------------------------------------------~~~~~~~~~~~~~l~  252 (335)
T 3dls_A          229 PFCELEETV--------------------------------------------------------EAAIHPPYLVSKELM  252 (335)
T ss_dssp             SCSSGGGGT--------------------------------------------------------TTCCCCSSCCCHHHH
T ss_pred             chhhHHHHH--------------------------------------------------------hhccCCCcccCHHHH
Confidence            996422100                                                        000011234678899


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +||.+||+.||.+|||+.++++||||++
T Consensus       253 ~li~~~L~~dP~~Rps~~ell~hp~~~~  280 (335)
T 3dls_A          253 SLVSGLLQPVPERRTTLEKLVTDPWVTQ  280 (335)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHCTTTTC
T ss_pred             HHHHHHccCChhhCcCHHHHhcCccccC
Confidence            9999999999999999999999999986

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=4.5e-48  Score=366.52  Aligned_cols=254  Identities=27%  Similarity=0.366  Sum_probs=212.9

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ..++|++++.||+|+||.||+|++..+++.||||++....    .....+..|+++++.+.      ||||+++++++..
T Consensus        52 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~  125 (348)
T 1u5q_A           52 PEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR------HPNTIQYRGCYLR  125 (348)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCC------CTTBCCEEEEEEE
T ss_pred             hhhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCC------CCCEeeEEEEEEE
Confidence            3456999999999999999999999999999999996432    22345677888888875      5999999999999


Q ss_pred             CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          140 RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       140 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      .+..++||||+.|+|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++                
T Consensus       126 ~~~~~lv~e~~~g~l~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~----------------  188 (348)
T 1u5q_A          126 EHTAWLVMEYCLGSASDLLEVHKK-PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS----------------  188 (348)
T ss_dssp             TTEEEEEEECCSEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE----------------
T ss_pred             CCeEEEEEecCCCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC----------------
Confidence            999999999998899988865432 699999999999999999999999999999999999994                


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGEALFQTHENL  296 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~  296 (399)
                              .++.+||+|||++..... ....+||+.|+|||++.   +..++.++|||||||++|+|++|..||...+..
T Consensus       189 --------~~~~~kL~DfG~a~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~  259 (348)
T 1u5q_A          189 --------EPGLVKLGDFGSASIMAP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM  259 (348)
T ss_dssp             --------TTTEEEECCCTTCBSSSS-BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH
T ss_pred             --------CCCCEEEeeccCceecCC-CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH
Confidence                    466799999999876543 34568999999999985   467899999999999999999999999887776


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +.+..+.....+.                                                .....++..+.+||.+||+
T Consensus       260 ~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~li~~~l~  291 (348)
T 1u5q_A          260 SALYHIAQNESPA------------------------------------------------LQSGHWSEYFRNFVDSCLQ  291 (348)
T ss_dssp             HHHHHHHHSCCCC------------------------------------------------CCCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHhcCCCC------------------------------------------------CCCCCCCHHHHHHHHHHcc
Confidence            6655543321110                                                0113456778999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCC
Q 015867          377 YDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .||.+|||++++++||||...
T Consensus       292 ~dP~~Rps~~~ll~h~~~~~~  312 (348)
T 1u5q_A          292 KIPQDRPTSEVLLKHRFVLRE  312 (348)
T ss_dssp             SSGGGSCCHHHHTTCHHHHSC
T ss_pred             cChhhCcCHHHHhhChhhhcc
Confidence            999999999999999999763

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=5.2e-49  Score=376.46  Aligned_cols=263  Identities=14%  Similarity=0.121  Sum_probs=195.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeec-------
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR-------  134 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~-------  134 (399)
                      .+|++.+.||+|+||.||+|.+..+++.||||++....    .....+..|+.+++.+.+    .|||+++++       
T Consensus        62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~----~hp~iv~~~~~~~~p~  137 (371)
T 3q60_A           62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG----ESPEEARDRRRLLLPS  137 (371)
T ss_dssp             EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC--------------CBCCCC
T ss_pred             eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc----cChhhhhhceeEEeee
Confidence            35999999999999999999999999999999998632    344556678777777764    468977754       


Q ss_pred             eeeccC-----------------CeEEEEEccCCCCHHHHHHhcCCCCCCHHHH------HHHHHHHHHHHHHHHHCCcc
Q 015867          135 NWFDYR-----------------NHICIVFEKLGPSLFDFLKRNKYCPFPVDLV------REFGRQLLESVAYMHDLRLI  191 (399)
Q Consensus       135 ~~~~~~-----------------~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~------~~i~~qi~~~L~~lH~~giv  191 (399)
                      +.+...                 ..+|+||||++++|.+++...+. .++....      ..++.||+.||+|||++||+
T Consensus       138 d~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~-~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~iv  216 (371)
T 3q60_A          138 DAVAVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDF-VYVFRGDEGILALHILTAQLIRLAANLQSKGLV  216 (371)
T ss_dssp             EEEEETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHH-SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred             hheecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhcc-ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCc
Confidence            333222                 34899999999999999987432 2444445      67779999999999999999


Q ss_pred             ccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC--CCCCC
Q 015867          192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG--LGWSY  269 (399)
Q Consensus       192 H~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~--~~~~~  269 (399)
                      ||||||+||||                        +.++.+||+|||++...........||+.|+|||++.+  ..++.
T Consensus       217 HrDikp~NIll------------------------~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~  272 (371)
T 3q60_A          217 HGHFTPDNLFI------------------------MPDGRLMLGDVSALWKVGTRGPASSVPVTYAPREFLNASTATFTH  272 (371)
T ss_dssp             ETTCSGGGEEE------------------------CTTSCEEECCGGGEEETTCEEEGGGSCGGGCCHHHHTCSEEECCH
T ss_pred             cCcCCHHHEEE------------------------CCCCCEEEEecceeeecCCCccCccCCcCCcChhhccCCCCCcCc
Confidence            99999999999                        45677999999999876655546677899999999987  68999


Q ss_pred             cchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhh
Q 015867          270 PCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL  349 (399)
Q Consensus       270 ~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  349 (399)
                      ++|||||||++|+|++|+.||.+.......                ...   .........                   
T Consensus       273 ~~DiwSlG~il~elltg~~Pf~~~~~~~~~----------------~~~---~~~~~~~~~-------------------  314 (371)
T 3q60_A          273 ALNAWQLGLSIYRVWCLFLPFGLVTPGIKG----------------SWK---RPSLRVPGT-------------------  314 (371)
T ss_dssp             HHHHHHHHHHHHHHHHSSCSTTBCCTTCTT----------------CCC---BCCTTSCCC-------------------
T ss_pred             cccHHHHHHHHHHHHhCCCCCCCcCccccc----------------chh---hhhhhhccc-------------------
Confidence            999999999999999999999765321000                000   000000000                   


Q ss_pred             hhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                         ........+.++.++.+||.+||+.||.+|||+.++|+||||+++.
T Consensus       315 ---~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~  360 (371)
T 3q60_A          315 ---DSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQLQ  360 (371)
T ss_dssp             ---CSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHHH
T ss_pred             ---cccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHHH
Confidence               0000111246788999999999999999999999999999998763

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=2.8e-48  Score=356.39  Aligned_cols=251  Identities=26%  Similarity=0.445  Sum_probs=185.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|.+..+++.||||++.....    ....+..|+.+++.+.      ||||+++++++.+.+
T Consensus        11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~   84 (278)
T 3cok_A           11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK------HPSILELYNYFEDSN   84 (278)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBC------CTTBCCEEEEEECSS
T ss_pred             ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCC------CCCeEeEEEEEccCC
Confidence            579999999999999999999999999999999965322    1245666777776664      699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+|+||||+|||+                  
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili------------------  145 (278)
T 3cok_A           85 YVYLVLEMCHNGEMNRYLKNRV-KPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLL------------------  145 (278)
T ss_dssp             EEEEEEECCTTEEHHHHHHTCS-SCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEE------------------
T ss_pred             eEEEEEecCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEE------------------
Confidence            999999999 889999998653 269999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                            +.++.++|+|||++.....   ......||+.|+|||++.+..++.++||||||+++|+|++|..||...+..+
T Consensus       146 ------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  219 (278)
T 3cok_A          146 ------TRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN  219 (278)
T ss_dssp             ------CTTCCEEECCCTTCEECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-
T ss_pred             ------cCCCCEEEEeecceeeccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH
Confidence                  4467799999998875432   2234679999999999999999999999999999999999999998655433


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+...                        .                          ...+..++.++.+||.+||+.
T Consensus       220 ~~~~~~~~------------------------~--------------------------~~~~~~~~~~~~~li~~~l~~  249 (278)
T 3cok_A          220 TLNKVVLA------------------------D--------------------------YEMPSFLSIEAKDLIHQLLRR  249 (278)
T ss_dssp             ----CCSS------------------------C--------------------------CCCCTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHhhc------------------------c--------------------------cCCccccCHHHHHHHHHHccc
Confidence            22111000                        0                          011234677889999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|||+.++++||||++.
T Consensus       250 dp~~Rps~~~~l~h~~~~~~  269 (278)
T 3cok_A          250 NPADRLSLSSVLDHPFMSRN  269 (278)
T ss_dssp             SGGGSCCHHHHTTSTTTC--
T ss_pred             CHhhCCCHHHHhcCccccCC
Confidence            99999999999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=6.9e-48  Score=353.28  Aligned_cols=255  Identities=26%  Similarity=0.406  Sum_probs=206.4

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      +....++|++.+.||+|+||.||+|.+..+++.||||++....    .....+..|+.+++.+.      |+||++++++
T Consensus         6 g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~   79 (276)
T 2h6d_A            6 GRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR------HPHIIKLYQV   79 (276)
T ss_dssp             -CCEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC------CTTBCCEEEE
T ss_pred             CcceeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCC------CCCEeEEEEE
Confidence            4455678999999999999999999999899999999996532    12345667777777664      6999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +...+..++||||+ +++|.+++...+  .+++..+..++.||+.||.|||++||+|+||||+|||+             
T Consensus        80 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~-------------  144 (276)
T 2h6d_A           80 ISTPTDFFMVMEYVSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL-------------  144 (276)
T ss_dssp             EECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEE-------------
T ss_pred             EecCCeEEEEEeccCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEE-------------
Confidence            99999999999999 889999998765  59999999999999999999999999999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                 +.++.++|+|||++......  .....||+.|+|||++.+..+ +.++||||||+++|+|++|..||..
T Consensus       145 -----------~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  213 (276)
T 2h6d_A          145 -----------DAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD  213 (276)
T ss_dssp             -----------CTTSCEEECCCCGGGCCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred             -----------CCCCCEEEeecccccccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence                       44667999999998764332  245578999999999988765 6899999999999999999999988


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....+.......                                                  +..++..+.+||.
T Consensus       214 ~~~~~~~~~~~~~~~~~--------------------------------------------------~~~~~~~l~~li~  243 (276)
T 2h6d_A          214 EHVPTLFKKIRGGVFYI--------------------------------------------------PEYLNRSVATLLM  243 (276)
T ss_dssp             SSHHHHHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHH
T ss_pred             CcHHHHHHHhhcCcccC--------------------------------------------------chhcCHHHHHHHH
Confidence            77665555543321111                                                  1245677899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||+.||.+|||+.|+++||||++.
T Consensus       244 ~~l~~~p~~Rps~~~~l~h~~~~~~  268 (276)
T 2h6d_A          244 HMLQVDPLKRATIKDIREHEWFKQD  268 (276)
T ss_dssp             HHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred             HHccCChhhCCCHHHHHhChhhccC
Confidence            9999999999999999999999863

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=7.5e-48  Score=355.48  Aligned_cols=259  Identities=22%  Similarity=0.364  Sum_probs=193.0

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ...++|++.+.||+|+||.||+|.+..+++.||||+++.............+...   ......||||+++++++.+.+.
T Consensus         4 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~---~~~~~~h~~iv~~~~~~~~~~~   80 (290)
T 3fme_A            4 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDI---SMRTVDCPFTVTFYGALFREGD   80 (290)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHH---HHTTCCCTTBCCEEEEEECSSS
T ss_pred             ccHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHH---HHHhCCCCeEEEEeeeeeccCC
Confidence            3457899999999999999999999999999999999754222221111111111   1233468999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      .++||||++++|.+++...  ....+++..+..++.||+.||+|||++ ||+||||||+|||+                 
T Consensus        81 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~-----------------  143 (290)
T 3fme_A           81 VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLI-----------------  143 (290)
T ss_dssp             EEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEE-----------------
T ss_pred             EEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEE-----------------
Confidence            9999999977998887641  233699999999999999999999998 99999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhh----hCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~----~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                             +.++.+||+|||++......  .....||+.|+|||++    .+..++.++||||||+++|+|++|..||...
T Consensus       144 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~  216 (290)
T 3fme_A          144 -------NALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSW  216 (290)
T ss_dssp             -------CTTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCC
T ss_pred             -------CCCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCcccc
Confidence                   34668999999998764332  2345799999999996    4567899999999999999999999999864


Q ss_pred             Cc-HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          294 EN-LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       294 ~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .. ......+.....+                                                ......++.++.+||.
T Consensus       217 ~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~  248 (290)
T 3fme_A          217 GTPFQQLKQVVEEPSP------------------------------------------------QLPADKFSAEFVDFTS  248 (290)
T ss_dssp             SCHHHHHHHHHHSCCC------------------------------------------------CCCTTTSCHHHHHHHH
T ss_pred             CchHHHHHHHhccCCC------------------------------------------------CcccccCCHHHHHHHH
Confidence            33 2222222211000                                                0111356788999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +||+.||.+|||+.|+++||||+.
T Consensus       249 ~~l~~~p~~Rpt~~e~l~hp~f~~  272 (290)
T 3fme_A          249 QCLKKNSKERPTYPELMQHPFFTL  272 (290)
T ss_dssp             HHTCSSGGGSCCHHHHTTSHHHHH
T ss_pred             HHhhcChhhCcCHHHHHhCccccc
Confidence            999999999999999999999975

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=1.9e-48  Score=367.54  Aligned_cols=265  Identities=29%  Similarity=0.452  Sum_probs=185.3

Q ss_pred             CCccCCCEEEEe-eeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           61 GENLTPRYKILS-KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        61 ~~~~~~~y~~~~-~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ...+.++|++.+ .||+|+||.||+|.+..+++.||||++.....    ...|...+...     .+|+||+++++++..
T Consensus        23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~-----~~h~~i~~~~~~~~~   93 (336)
T 3fhr_A           23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQA-----SGGPHIVCILDVYEN   93 (336)
T ss_dssp             CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHH-----TTSTTBCCEEEEEEE
T ss_pred             CccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHh-----cCCCChHHHHHHHhh
Confidence            345677899976 59999999999999999999999999975432    22233322222     257999999998876


Q ss_pred             ----CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          140 ----RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       140 ----~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                          ....++||||+ +++|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.+         
T Consensus        94 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~---------  164 (336)
T 3fhr_A           94 MHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSK---------  164 (336)
T ss_dssp             EETTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCS---------
T ss_pred             ccCCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEec---------
Confidence                45689999999 8899999998765679999999999999999999999999999999999999643         


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                  +.++.+||+|||++..... ......||+.|+|||++.+..++.++||||||+++|+|++|..||...
T Consensus       165 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  232 (336)
T 3fhr_A          165 ------------EKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSN  232 (336)
T ss_dssp             ------------STTCCEEECCCTTCEEC----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---
T ss_pred             ------------CCCceEEEeccccceeccccccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence                        2356799999999875433 234567899999999998888999999999999999999999999765


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      ........+......                    ...                      .........++.++.+||.+
T Consensus       233 ~~~~~~~~~~~~~~~--------------------~~~----------------------~~~~~~~~~~~~~~~~li~~  270 (336)
T 3fhr_A          233 TGQAISPGMKRRIRL--------------------GQY----------------------GFPNPEWSEVSEDAKQLIRL  270 (336)
T ss_dssp             ------------------------------------------------------------CCCTTTSTTCCHHHHHHHHH
T ss_pred             cchhhhhhHHHhhhc--------------------ccc----------------------ccCchhhccCCHHHHHHHHH
Confidence            543321111100000                    000                      00011124568889999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||+.||.+|||+.|+++||||++.
T Consensus       271 ~L~~dP~~Rpt~~ell~hp~~~~~  294 (336)
T 3fhr_A          271 LLKTDPTERLTITQFMNHPWINQS  294 (336)
T ss_dssp             HSCSSGGGSCCHHHHHHSHHHHTG
T ss_pred             HCCCChhHCcCHHHHhcCcccccc
Confidence            999999999999999999999863

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=1.1e-47  Score=355.59  Aligned_cols=260  Identities=23%  Similarity=0.384  Sum_probs=207.8

Q ss_pred             ccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           59 NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        59 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ..+..+.++|++.+.||+|+||.||+|++..+++.||+|++....    .....+..|+.+++.+      .||||++++
T Consensus         4 ~~g~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l------~hp~iv~~~   77 (294)
T 4eqm_A            4 MIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL------SHQNIVSMI   77 (294)
T ss_dssp             CCSSCEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTC------CBTTBCCEE
T ss_pred             chhhHhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcC------CCCCCceEE
Confidence            346778899999999999999999999999999999999985422    2234456666666665      469999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      +++.+.+..|+||||+ |++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||+           
T Consensus        78 ~~~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~-----------  144 (294)
T 4eqm_A           78 DVDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI-----------  144 (294)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-----------
T ss_pred             EeeeeCCeEEEEEeCCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEE-----------
Confidence            9999999999999999 889999998876  69999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                   +.++.+||+|||++......    .....||+.|+|||++.+..++.++||||||+++|+|++|+.|
T Consensus       145 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~p  211 (294)
T 4eqm_A          145 -------------DSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP  211 (294)
T ss_dssp             -------------CTTSCEEECCCSSSTTC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCS
T ss_pred             -------------CCCCCEEEEeCCCccccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence                         45678999999998764332    2345799999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+..+........  ..+.                                           ......+.++..+.+
T Consensus       212 f~~~~~~~~~~~~~~~--~~~~-------------------------------------------~~~~~~~~~~~~l~~  246 (294)
T 4eqm_A          212 FNGETAVSIAIKHIQD--SVPN-------------------------------------------VTTDVRKDIPQSLSN  246 (294)
T ss_dssp             SCSSCHHHHHHHHHSS--CCCC-------------------------------------------HHHHSCTTSCHHHHH
T ss_pred             CCCCChHHHHHHHhhc--cCCC-------------------------------------------cchhcccCCCHHHHH
Confidence            9887765544333221  1110                                           011122456788999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCcccc
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      +|.+||+.||.+||+..+.+.+.|..
T Consensus       247 li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          247 VILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             HHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             HHHHHhcCCHhHccccHHHHHHHHHH
Confidence            99999999999999655555555544

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=9.6e-48  Score=360.06  Aligned_cols=280  Identities=21%  Similarity=0.312  Sum_probs=213.7

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      ..+.++|++.+.||+|+||+||+|.+..+++.||||++....  .....+..|+++++.+.      |+||+++++++..
T Consensus         5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~   78 (319)
T 4euu_A            5 STSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN------HKNIVKLFAIEEE   78 (319)
T ss_dssp             ECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCC------CTTBCCEEEEEEC
T ss_pred             cCCCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcC------CCCcceEEEEeec
Confidence            456678999999999999999999999999999999997533  23455678888888885      5999999998876


Q ss_pred             CC--eEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          140 RN--HICIVFEKL-GPSLFDFLKRNKY-CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       140 ~~--~~~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      .+  ..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++||+||||||+|||+..+.         
T Consensus        79 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~---------  149 (319)
T 4euu_A           79 TTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE---------  149 (319)
T ss_dssp             TTTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECT---------
T ss_pred             CCCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccC---------
Confidence            54  889999999 8999999986542 2399999999999999999999999999999999999984322         


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhh--------CCCCCCcchhHHHHHHHHHHHh
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVIL--------GLGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~--------~~~~~~~~DiwslG~il~ell~  285 (399)
                                 +.++.+||+|||++.....  ......||+.|+|||++.        +..++.++|||||||++|+|++
T Consensus       150 -----------~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~  218 (319)
T 4euu_A          150 -----------DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAAT  218 (319)
T ss_dssp             -----------TSCEEEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHH
T ss_pred             -----------CCCceEEEccCCCceecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHh
Confidence                       3466799999999876433  234567999999999987        5689999999999999999999


Q ss_pred             CCCCCCCCC----cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccch
Q 015867          286 GEALFQTHE----NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD  361 (399)
Q Consensus       286 g~~Pf~~~~----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (399)
                      |..||....    ..+....+....   |...+......      ......|....                ........
T Consensus       219 g~~pf~~~~~~~~~~~~~~~~~~~~---p~~~~~~~~~~------~~~~~~~~~~~----------------~~~~~~~~  273 (319)
T 4euu_A          219 GSLPFRPFEGPRRNKEVMYKIITGK---PSGAISGVQKA------ENGPIDWSGDM----------------PVSCSLSR  273 (319)
T ss_dssp             SSCSEECTTCGGGCHHHHHHHHHHC---CTTCCEEEECS------TTCCEEEESSC----------------CTTCSSCH
T ss_pred             CCCCCCCCCccchhHHHHHHHhcCC---Ccccchhhhcc------cCCccccCccC----------------Ccccccch
Confidence            999997533    334444443332   11111111000      00111121100                00012235


Q ss_pred             hhhhHHHHHHHHccccCCCCCCCHHHHhCCc
Q 015867          362 RARSTLTDLLHGLLRYDPSERLTARQALNHP  392 (399)
Q Consensus       362 ~~~~~~~~li~~~L~~dP~~R~t~~ell~hp  392 (399)
                      .++..+.+||.+||+.||.+|||++|+|+||
T Consensus       274 ~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~  304 (319)
T 4euu_A          274 GLQVLLTPVLANILEADQEKCWGFDQFFAET  304 (319)
T ss_dssp             HHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred             hHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence            6778899999999999999999999999997

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=5.1e-48  Score=356.46  Aligned_cols=263  Identities=33%  Similarity=0.546  Sum_probs=219.0

Q ss_pred             cCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        60 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      ....+.++|++.+.||+|+||.||+|.+..+++.||||++....   .....+..|+++++.+.      |+||++++++
T Consensus        16 ~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~   89 (287)
T 2wei_A           16 FQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD------HPNIMKLFEI   89 (287)
T ss_dssp             HTHHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCC------CTTBCCEEEE
T ss_pred             HHHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcc------CCCccEEEEE
Confidence            34556778999999999999999999999999999999996532   23456777888888774      5999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +.+.+..++||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+|+||||+||+++.++         
T Consensus        90 ~~~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~---------  158 (287)
T 2wei_A           90 LEDSSSFYIVGELYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKE---------  158 (287)
T ss_dssp             EECSSEEEEEECCCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS---------
T ss_pred             EeCCCeEEEEEEccCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCC---------
Confidence            99999999999999 899999987765  599999999999999999999999999999999999995432         


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                  .+..+||+|||++......  .....||+.|+|||++.+. ++.++||||||+++|+|++|..||.+.
T Consensus       159 ------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~  225 (287)
T 2wei_A          159 ------------KDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGK  225 (287)
T ss_dssp             ------------TTCCEEECSTTGGGTBCCCSSCSCHHHHHTTCCHHHHTTC-CCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             ------------CcccEEEeccCcceeecCCCccccccCcccccChHHhcCC-CCCchhhHhHHHHHHHHHhCCCCCCCC
Confidence                        3567999999988754332  2345689999999998764 899999999999999999999999988


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+....+......++                                              ......++.++.+||.+
T Consensus       226 ~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~~~~~li~~  259 (287)
T 2wei_A          226 NEYDILKRVETGKYAFD----------------------------------------------LPQWRTISDDAKDLIRK  259 (287)
T ss_dssp             SHHHHHHHHHHCCCCCC----------------------------------------------SGGGTTSCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCC----------------------------------------------chhhhhcCHHHHHHHHH
Confidence            77766665544322111                                              01123567889999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ||..||.+|||+.|+++||||++..
T Consensus       260 ~l~~dp~~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          260 MLTFHPSLRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             HTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred             HcccChhhCcCHHHHhcCHHHhccc
Confidence            9999999999999999999998753

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=3.9e-47  Score=351.02  Aligned_cols=253  Identities=23%  Similarity=0.393  Sum_probs=205.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc---
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY---  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~---  139 (399)
                      ..|++.+.||+|+||.||+|.+..++..||+|++....   .....+..|+.+++.+.      ||||+++++++..   
T Consensus        26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~   99 (290)
T 1t4h_A           26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ------HPNIVRFYDSWESTVK   99 (290)
T ss_dssp             CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC------CTTBCCEEEEEEEESS
T ss_pred             eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCC------CCCeeeeeeeeccccC
Confidence            35899999999999999999999999999999987532   23345666777776664      6999999998765   


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccCCCCcC
Q 015867          140 -RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       140 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                       ....++||||+ +++|.+++...+  .+++..+..++.||+.||.|||++|  |+|+||||+|||++            
T Consensus       100 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~------------  165 (290)
T 1t4h_A          100 GKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT------------  165 (290)
T ss_dssp             SCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES------------
T ss_pred             CCceEEEEEEecCCCCHHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEE------------
Confidence             46789999999 889999998765  5999999999999999999999999  99999999999994            


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCC-CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                                 ..++.++|+|||++...... .....||+.|+|||++.+ .++.++||||||+++|+|++|..||....
T Consensus       166 -----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~  233 (290)
T 1t4h_A          166 -----------GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQ  233 (290)
T ss_dssp             -----------STTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCS
T ss_pred             -----------CCCCCEEEeeCCCcccccccccccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcC
Confidence                       24678999999998764433 345679999999998875 58999999999999999999999998765


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ............. .+                                              .......++++.+||.+|
T Consensus       234 ~~~~~~~~~~~~~-~~----------------------------------------------~~~~~~~~~~l~~li~~~  266 (290)
T 1t4h_A          234 NAAQIYRRVTSGV-KP----------------------------------------------ASFDKVAIPEVKEIIEGC  266 (290)
T ss_dssp             SHHHHHHHHTTTC-CC----------------------------------------------GGGGGCCCHHHHHHHHHH
T ss_pred             cHHHHHHHHhccC-Cc----------------------------------------------cccCCCCCHHHHHHHHHH
Confidence            5443332211100 00                                              011234567789999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      |+.||.+|||+.|+++||||++-
T Consensus       267 l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          267 IRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGC--
T ss_pred             ccCChhhCCCHHHHhhCcccccC
Confidence            99999999999999999999863

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=1.1e-47  Score=360.02  Aligned_cols=259  Identities=31%  Similarity=0.496  Sum_probs=207.8

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---------hhhHHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++....         .....+..|+++++.+.      |+||+++
T Consensus         7 ~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~   80 (322)
T 2ycf_A            7 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN------HPCIIKI   80 (322)
T ss_dssp             HHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCC------CTTBCCE
T ss_pred             hhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCC------CCCCceE
Confidence            45578999999999999999999999999999999986422         11234667888888874      5999999


Q ss_pred             ceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      ++++...+ .|+||||+ +++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++.++      
T Consensus        81 ~~~~~~~~-~~lv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~------  151 (322)
T 2ycf_A           81 KNFFDAED-YYIVLELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQE------  151 (322)
T ss_dssp             EEEEESSS-EEEEEECCTTEETHHHHSTTC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSS------
T ss_pred             eeEEcCCc-eEEEEecCCCCcHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCC------
Confidence            99987655 89999999 889999997655  699999999999999999999999999999999999995432      


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC--cccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHhCC
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH--SSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCTGE  287 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~g~  287 (399)
                                     .+..+||+|||++.......  ....||+.|+|||++.   ...++.++|||||||++|+|++|.
T Consensus       152 ---------------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~  216 (322)
T 2ycf_A          152 ---------------EDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY  216 (322)
T ss_dssp             ---------------SSCCEEECCCTTCEECCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSS
T ss_pred             ---------------CCCeEEEccCccceecccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCC
Confidence                           34569999999987654432  3457999999999985   457899999999999999999999


Q ss_pred             CCCCCCCcH-HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          288 ALFQTHENL-EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       288 ~Pf~~~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      .||...... .....+......+..                                              .....++.+
T Consensus       217 ~pf~~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~  250 (322)
T 2ycf_A          217 PPFSEHRTQVSLKDQITSGKYNFIP----------------------------------------------EVWAEVSEK  250 (322)
T ss_dssp             CSSCSTTCSSCHHHHHHHTCCCCCH----------------------------------------------HHHTTSCHH
T ss_pred             CCCcccchHHHHHHHHHhCccccCc----------------------------------------------hhhhhcCHH
Confidence            999765432 222222222111111                                              112356788


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          367 LTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +.+||.+||+.||.+|||+.++++||||++.
T Consensus       251 ~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          251 ALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             HHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence            9999999999999999999999999999863

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=5.2e-48  Score=360.65  Aligned_cols=262  Identities=21%  Similarity=0.305  Sum_probs=206.9

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ...+.++|++.+.||+|+||.||+|.+..+++.||||+++.........  ...+.+++.......||||+++++++...
T Consensus         7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~--~~~~~~E~~~l~~l~hp~iv~~~~~~~~~   84 (311)
T 3ork_A            7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSF--YLRFRREAQNAAALNHPAIVAVYDTGEAE   84 (311)
T ss_dssp             CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHH--HHHHHHHHTTCCCCCCTTBCCEEEEEEEE
T ss_pred             cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHH--HHHHHHHHHHHHcCCCCCcceEEEeeecc
Confidence            4567789999999999999999999999999999999997532221111  12233444444455689999999988764


Q ss_pred             C----eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          141 N----HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       141 ~----~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      .    ..|+||||+ |++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++            
T Consensus        85 ~~~~~~~~lv~e~~~g~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~------------  150 (311)
T 3ork_A           85 TPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS------------  150 (311)
T ss_dssp             ETTEEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE------------
T ss_pred             CCCCcccEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc------------
Confidence            3    459999999 899999998766  599999999999999999999999999999999999994            


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                  .++.+||+|||++......      .....||+.|+|||++.+..++.++||||||+++|+|++|..|
T Consensus       151 ------------~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~p  218 (311)
T 3ork_A          151 ------------ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP  218 (311)
T ss_dssp             ------------TTSCEEECCCSCC------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ------------CCCCEEEeeccCcccccccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence                        4667999999998653322      2345799999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+..+....+......++.                                              .....++.++.+
T Consensus       219 f~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~~~~l~~  252 (311)
T 3ork_A          219 FTGDSPVSVAYQHVREDPIPPS----------------------------------------------ARHEGLSADLDA  252 (311)
T ss_dssp             CCCSSHHHHHHHHHHCCCCCHH----------------------------------------------HHSTTCCHHHHH
T ss_pred             CCCCChHHHHHHHhcCCCCCcc----------------------------------------------cccCCCCHHHHH
Confidence            9988876665555443222111                                              112356788999


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ||.+||+.||.+||++.+++.|+|++.
T Consensus       253 li~~~l~~dP~~R~~~~~~l~~~l~~~  279 (311)
T 3ork_A          253 VVLKALAKNPENRYQTAAEMRADLVRV  279 (311)
T ss_dssp             HHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred             HHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence            999999999999999999999999864

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=2.3e-47  Score=354.45  Aligned_cols=262  Identities=25%  Similarity=0.424  Sum_probs=211.9

Q ss_pred             ccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           59 NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        59 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ..+....++|++.+.||+|+||.||+|.+..+++.||+|++.... .....+..|+++++.+.      ||||+++++++
T Consensus        12 ~~~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~   85 (302)
T 2j7t_A           12 RRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD------HPYIVKLLGAY   85 (302)
T ss_dssp             BSSSCGGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCC------CTTBCCEEEEE
T ss_pred             ccccCCccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCC------CCCEeeeeeee
Confidence            334456678999999999999999999999999999999986432 23456777888888774      69999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      ...+..++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+|+||||+|||+              
T Consensus        86 ~~~~~~~lv~e~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~--------------  150 (302)
T 2j7t_A           86 YHDGKLWIMIEFCPGGAVDAIMLELDR-GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLM--------------  150 (302)
T ss_dssp             ECC-CEEEEEECCTTEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE--------------
T ss_pred             eeCCeEEEEEEeCCCCcHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEE--------------
Confidence            9999999999999 8899999876432 59999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccC---CCCCcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFD---NQNHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~---~~~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                                +.++.++|+|||++...   ........||+.|+|||++.     +..++.++||||||+++|+|++|..
T Consensus       151 ----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~  220 (302)
T 2j7t_A          151 ----------TLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEP  220 (302)
T ss_dssp             ----------CTTSCEEECCCHHHHHHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------CCCCCEEEEECCCCccccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCC
Confidence                      34667999999986431   11223467999999999984     6678999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||...+..+....+.....+.                                               ...+..++..+.
T Consensus       221 p~~~~~~~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~l~  253 (302)
T 2j7t_A          221 PHHELNPMRVLLKIAKSDPPT-----------------------------------------------LLTPSKWSVEFR  253 (302)
T ss_dssp             TTTTSCHHHHHHHHHHSCCCC-----------------------------------------------CSSGGGSCHHHH
T ss_pred             CCccCCHHHHHHHHhccCCcc-----------------------------------------------cCCccccCHHHH
Confidence            999877766555443321100                                               011235677889


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||.+||+.||.+|||+.++++||||+++.
T Consensus       254 ~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          254 DFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             HHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             HHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            999999999999999999999999999864

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=6.2e-48  Score=361.60  Aligned_cols=257  Identities=28%  Similarity=0.460  Sum_probs=212.2

Q ss_pred             eeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-------hhHHHHHHHHHHHHhhhcCCCCCcc
Q 015867           57 VFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEIDVLQHLAKNDKGGSSH  129 (399)
Q Consensus        57 ~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~  129 (399)
                      +...++.+.++|++.+.||+|+||.||+|.+..+++.||||++.....       ....+..|+.+++.+.+    +|+|
T Consensus        34 ~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~----~~~~  109 (320)
T 3a99_A           34 PGKEKEPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----GFSG  109 (320)
T ss_dssp             ------CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS----SSCS
T ss_pred             cccccCCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhcc----CCCC
Confidence            445567788899999999999999999999999999999999975432       22456779999999875    5799


Q ss_pred             eeeeceeeccCCeEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccc
Q 015867          130 CVQIRNWFDYRNHICIVFEKL-G-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEF  207 (399)
Q Consensus       130 iv~~~~~~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~  207 (399)
                      |+++++++...+..++|||++ + ++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++.   
T Consensus       110 i~~~~~~~~~~~~~~lv~e~~~~~~~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~---  184 (320)
T 3a99_A          110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---  184 (320)
T ss_dssp             BCCEEEEEECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---
T ss_pred             ceEEEEEEecCCcEEEEEEcCCCCccHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC---
Confidence            999999999999999999999 4 89999998765  5999999999999999999999999999999999999942   


Q ss_pred             ccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-CcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHh
Q 015867          208 IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-HSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCT  285 (399)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~  285 (399)
                                          .++.+||+|||++...... .....||+.|+|||++.+..+ +.++||||||+++|+|++
T Consensus       185 --------------------~~~~~kL~Dfg~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~  244 (320)
T 3a99_A          185 --------------------NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC  244 (320)
T ss_dssp             --------------------TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHH
T ss_pred             --------------------CCCCEEEeeCccccccccccccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHH
Confidence                                3567999999998764432 345679999999999987765 688999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |..||...+.      +....                                                  ......++.
T Consensus       245 g~~pf~~~~~------~~~~~--------------------------------------------------~~~~~~~~~  268 (320)
T 3a99_A          245 GDIPFEHDEE------IIRGQ--------------------------------------------------VFFRQRVSS  268 (320)
T ss_dssp             SSCSCCSHHH------HHHCC--------------------------------------------------CCCSSCCCH
T ss_pred             CCCCCCChhh------hhccc--------------------------------------------------ccccccCCH
Confidence            9999964221      10000                                                  011235677


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ++.+||.+||+.||.+|||++|+++||||+++.
T Consensus       269 ~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          269 ECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence            889999999999999999999999999999863

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=1.9e-47  Score=352.05  Aligned_cols=273  Identities=21%  Similarity=0.261  Sum_probs=205.8

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..+.++|++.+.||+|+||.||+|.+..+++.||||++...   ......+..|+.++..+.     .||||+++++++.
T Consensus         7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~-----~h~~iv~~~~~~~   81 (289)
T 1x8b_A            7 SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG-----QHSHVVRYFSAWA   81 (289)
T ss_dssp             CHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSC-----SCTTBCCEEEEEE
T ss_pred             ccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhC-----CCCCeeeeeeeee
Confidence            44567899999999999999999999999999999999753   223345566666666663     4799999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY--CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +.+..++||||+ +++|.+++.....  ..+++..+..++.||+.||+|||++||+||||||+|||++.++.........
T Consensus        82 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~  161 (289)
T 1x8b_A           82 EDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEG  161 (289)
T ss_dssp             ETTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC------------
T ss_pred             cCCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccc
Confidence            999999999999 8899999976421  3599999999999999999999999999999999999997655322211110


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                      ..     .........++|+|||.+...... ....||+.|+|||++.+. .++.++||||||+++|+|++|.+|+....
T Consensus       162 ~~-----~~~~~~~~~~kl~Dfg~~~~~~~~-~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~  235 (289)
T 1x8b_A          162 DE-----DDWASNKVMFKIGDLGHVTRISSP-QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD  235 (289)
T ss_dssp             -------------CCCEEECCCTTCEETTCS-CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH
T ss_pred             cc-----ccccCCceEEEEcccccccccCCc-cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh
Confidence            00     000124667999999998765443 345699999999999876 66789999999999999999998875432


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      .   ...+....  .                                               ...+..++.++.+||.+|
T Consensus       236 ~---~~~~~~~~--~-----------------------------------------------~~~~~~~~~~~~~li~~~  263 (289)
T 1x8b_A          236 Q---WHEIRQGR--L-----------------------------------------------PRIPQVLSQEFTELLKVM  263 (289)
T ss_dssp             H---HHHHHTTC--C-----------------------------------------------CCCSSCCCHHHHHHHHHH
T ss_pred             H---HHHHHcCC--C-----------------------------------------------CCCCcccCHHHHHHHHHH
Confidence            2   11111100  0                                               011235678899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      |+.||.+|||+.|+++||||++.
T Consensus       264 l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          264 IHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             TCSSGGGSCCHHHHHTCTTC---
T ss_pred             hCCCcccCCCHHHHhhChHhhhh
Confidence            99999999999999999999875

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=1.5e-47  Score=350.95  Aligned_cols=255  Identities=25%  Similarity=0.391  Sum_probs=209.0

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      +.++|++.+.||+|+||.||+|.+..+++.||||++....  .....+..|+.+++.+.      |+||+++++++.+.+
T Consensus         5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~   78 (276)
T 2yex_A            5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN------HENVVKFYGHRREGN   78 (276)
T ss_dssp             HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCC------CTTBCCEEEEEEETT
T ss_pred             eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcC------CCCceeeeeEEEcCC
Confidence            3467999999999999999999999999999999996533  23355677887777764      699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ +++|.+++....  .+++..+..++.||+.||+|||++||+|+||||+||+++                 
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~-----------------  139 (276)
T 2yex_A           79 IQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-----------------  139 (276)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-----------------
T ss_pred             EEEEEEEecCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc-----------------
Confidence            999999999 889999987654  599999999999999999999999999999999999993                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCC-----CCCcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDN-----QNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                             .++.++|+|||.+....     .......||+.|+|||++.+..+ +.++||||||+++|+|++|..||....
T Consensus       140 -------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  212 (276)
T 2yex_A          140 -------ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  212 (276)
T ss_dssp             -------TTCCEEECCCTTCEECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred             -------cCCCEEEeeCCCccccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence                   46679999999886532     12345679999999999988765 788999999999999999999998654


Q ss_pred             cHHH-HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          295 NLEH-LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       295 ~~~~-~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      .... ...+.....                                                .......++..+.+||.+
T Consensus       213 ~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~~li~~  244 (276)
T 2yex_A          213 DSCQEYSDWKEKKT------------------------------------------------YLNPWKKIDSAPLALLHK  244 (276)
T ss_dssp             TTSHHHHHHHTTCT------------------------------------------------TSTTGGGSCHHHHHHHHH
T ss_pred             hHHHHHHHhhhccc------------------------------------------------ccCchhhcCHHHHHHHHH
Confidence            4221 111111000                                                001124567889999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ||+.||.+|||+.|+++||||++..
T Consensus       245 ~l~~~p~~Rps~~~il~~~~~~~~~  269 (276)
T 2yex_A          245 ILVENPSARITIPDIKKDRWYNKPL  269 (276)
T ss_dssp             HSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             HCCCCchhCCCHHHHhcCccccChh
Confidence            9999999999999999999999753

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=2e-47  Score=355.34  Aligned_cols=254  Identities=25%  Similarity=0.449  Sum_probs=207.5

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee-
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF-  137 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~-  137 (399)
                      +.++|++.+.||+|+||.||+|.+..+++.||+|++....     .....+..|+++++.+      .|+||+++++++ 
T Consensus         3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~~~~~~   76 (305)
T 2wtk_C            3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRL------RHKNVIQLVDVLY   76 (305)
T ss_dssp             --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTC------CCTTBCCEEEEEE
T ss_pred             cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhc------CCCCeeEEEEEEE
Confidence            4578999999999999999999999999999999997532     2234566677777666      469999999988 


Q ss_pred             -ccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 -DYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 -~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                       .+.+..++||||+.++|.+++.......+++..+..++.||+.||.|||++||+||||||+|||+              
T Consensus        77 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~--------------  142 (305)
T 2wtk_C           77 NEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLL--------------  142 (305)
T ss_dssp             CC---CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE--------------
T ss_pred             cCCCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEE--------------
Confidence             44568999999996669898887666679999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCC--CCCcchhHHHHHHHHHHHhCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLG--WSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~ell~g~~P  289 (399)
                                +.++.++|+|||++......     .....||+.|+|||++.+..  ++.++||||||+++|+|++|..|
T Consensus       143 ----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p  212 (305)
T 2wtk_C          143 ----------TTGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYP  212 (305)
T ss_dssp             ----------CTTCCEEECCCTTCEECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ----------cCCCcEEeeccccccccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCC
Confidence                      44678999999998654321     23456899999999998754  47899999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+..+....+......                                                  .+..++..+.+
T Consensus       213 ~~~~~~~~~~~~i~~~~~~--------------------------------------------------~~~~~~~~l~~  242 (305)
T 2wtk_C          213 FEGDNIYKLFENIGKGSYA--------------------------------------------------IPGDCGPPLSD  242 (305)
T ss_dssp             CCCSSHHHHHHHHHHCCCC--------------------------------------------------CCSSSCHHHHH
T ss_pred             CCCchHHHHHHHHhcCCCC--------------------------------------------------CCCccCHHHHH
Confidence            9987766655555432111                                                  11345778899


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+||+.||.+|||+.|+++||||++.
T Consensus       243 li~~~l~~dp~~Rps~~~ll~~~~~~~~  270 (305)
T 2wtk_C          243 LLKGMLEYEPAKRFSIRQIRQHSWFRKK  270 (305)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHSHHHHSC
T ss_pred             HHHHHccCChhhCCCHHHHhcCcccccC
Confidence            9999999999999999999999999874

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=1.1e-46  Score=351.99  Aligned_cols=257  Identities=27%  Similarity=0.442  Sum_probs=208.0

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ....++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+..|+.+++.+.      |+||+++++++...+
T Consensus        25 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~   97 (314)
T 3com_A           25 KQPEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES-DLQEIIKEISIMQQCD------SPHVVKYYGSYFKNT   97 (314)
T ss_dssp             -----CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS-CCHHHHHHHHHHHTCC------CTTBCCEEEEEEETT
T ss_pred             hcchhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH-HHHHHHHHHHHHHhCC------CCCCccEEEEEEeCC
Confidence            345668999999999999999999999999999999997543 3355677888888774      699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+|+||||+||++                  
T Consensus        98 ~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~------------------  158 (314)
T 3com_A           98 DLWIVMEYCGAGSVSDIIRLRNK-TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILL------------------  158 (314)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHTC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE------------------
T ss_pred             EEEEEeecCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEE------------------
Confidence            999999999 7899999974332 69999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                            +.++.++|+|||++......   .....||+.|+|||++.+..++.++||||||+++|+|++|..||...+...
T Consensus       159 ------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~  232 (314)
T 3com_A          159 ------NTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR  232 (314)
T ss_dssp             ------CTTCCEEECCCTTCEECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             ------CCCCCEEEeecccchhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH
Confidence                  34667999999998653322   345679999999999999999999999999999999999999998776655


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+......                                               ....+..++..+.+||.+||..
T Consensus       233 ~~~~~~~~~~~-----------------------------------------------~~~~~~~~~~~l~~li~~~l~~  265 (314)
T 3com_A          233 AIFMIPTNPPP-----------------------------------------------TFRKPELWSDNFTDFVKQCLVK  265 (314)
T ss_dssp             HHHHHHHSCCC-----------------------------------------------CCSSGGGSCHHHHHHHHHHTCS
T ss_pred             HHHHHhcCCCc-----------------------------------------------ccCCcccCCHHHHHHHHHHccC
Confidence            44333221100                                               0011234577889999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|||+.++++||||++.
T Consensus       266 dp~~Rpt~~~ll~~~~~~~~  285 (314)
T 3com_A          266 SPEQRATATQLLQHPFVRSA  285 (314)
T ss_dssp             CTTTSCCHHHHTTSHHHHTC
T ss_pred             ChhhCcCHHHHHhCHHHhcC
Confidence            99999999999999999875

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=2.4e-46  Score=346.77  Aligned_cols=259  Identities=21%  Similarity=0.258  Sum_probs=211.5

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      +..+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+..|+.+++.+.     +|++++++++++...
T Consensus         5 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~~~~l~-----~~~~i~~~~~~~~~~   78 (298)
T 1csn_A            5 NNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLA-----GCTGIPNVYYFGQEG   78 (298)
T ss_dssp             -CEETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTT-----TCTTCCCEEEEEEET
T ss_pred             CcccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC-ccHHHHHHHHHHHHHh-----cCCCCCeEEeecCCC
Confidence            4567788999999999999999999999999999999986532 3355778889998885     368999999999999


Q ss_pred             CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          141 NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       141 ~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ...++||||++++|.+++...+. .+++..+..++.||+.||+|||++||+||||||+|||++.++.             
T Consensus        79 ~~~~lv~e~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~-------------  144 (298)
T 1csn_A           79 LHNVLVIDLLGPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNS-------------  144 (298)
T ss_dssp             TEEEEEEECCCCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSS-------------
T ss_pred             ceeEEEEEecCCCHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCC-------------
Confidence            99999999999999999987543 5999999999999999999999999999999999999965431             


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC----------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN----------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                            .....+||+|||++......          .....||+.|+|||++.+..++.++||||||+++|+|++|+.||
T Consensus       145 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf  218 (298)
T 1csn_A          145 ------KNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW  218 (298)
T ss_dssp             ------TTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ------CCCCeEEEEECccccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCc
Confidence                  23556999999998653321          24567999999999999999999999999999999999999999


Q ss_pred             CCCC---cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHH
Q 015867          291 QTHE---NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL  367 (399)
Q Consensus       291 ~~~~---~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (399)
                      .+.+   ..+....+.......+.                                             ....+.++.++
T Consensus       219 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~l  253 (298)
T 1csn_A          219 QGLKAATNKQKYERIGEKKQSTPL---------------------------------------------RELCAGFPEEF  253 (298)
T ss_dssp             SSCCSCCHHHHHHHHHHHHHHSCH---------------------------------------------HHHTTTSCHHH
T ss_pred             chhhccccHHHHHHHHhhccCccH---------------------------------------------HHHHhhCcHHH
Confidence            8743   33333333322111111                                             11123567889


Q ss_pred             HHHHHHccccCCCCCCCHHHHhC
Q 015867          368 TDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||.+||+.||.+|||+.+|++
T Consensus       254 ~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          254 YKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHHHhcCCcccCCCHHHHHH
Confidence            99999999999999999999865

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=1.9e-47  Score=362.25  Aligned_cols=278  Identities=21%  Similarity=0.391  Sum_probs=217.3

Q ss_pred             eccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhh------------------HHHHHHHHHHHHh
Q 015867           58 FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR------------------DAAMIEIDVLQHL  119 (399)
Q Consensus        58 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~------------------~~~~~e~~~l~~l  119 (399)
                      +..+..+.++|++.+.||+|+||.||+|.+  +++.||||++.......                  ..+..|+.+++.+
T Consensus        23 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l  100 (348)
T 2pml_X           23 VKEKDKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDI  100 (348)
T ss_dssp             ESSSCEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTC
T ss_pred             hhhcccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhC
Confidence            344555678999999999999999999988  89999999997533221                  6677788888777


Q ss_pred             hhcCCCCCcceeeeceeeccCCeEEEEEccC-CCCHHHH------HHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCcc
Q 015867          120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDF------LKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLI  191 (399)
Q Consensus       120 ~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~------l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~giv  191 (399)
                      .      |+||+++++++.+.+..++||||+ +++|.++      +.......+++..+..++.||+.||.|||+ +||+
T Consensus       101 ~------h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~  174 (348)
T 2pml_X          101 K------NEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNIC  174 (348)
T ss_dssp             C------CTTBCCCSEEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEE
T ss_pred             C------CCCcceEEEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEe
Confidence            4      699999999999999999999999 8899998      665434579999999999999999999999 9999


Q ss_pred             ccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCC-CCCcccccCCCccchhhhhCC-CCCC
Q 015867          192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-QNHSSIVSTRHYRAPEVILGL-GWSY  269 (399)
Q Consensus       192 H~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~~-~~~~  269 (399)
                      |+||||+|||+                        +.++.++|+|||++.... .......||+.|+|||++.+. .++.
T Consensus       175 H~dl~p~Nil~------------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~  230 (348)
T 2pml_X          175 HRDVKPSNILM------------------------DKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNG  230 (348)
T ss_dssp             CCCCCGGGEEE------------------------CTTSCEEECCCTTCEECBTTEECSSCSCGGGCCGGGGSSCCCEEH
T ss_pred             ecCCChHhEEE------------------------cCCCcEEEeccccccccccccccCCCCCcCccCchhhcCCCCCCc
Confidence            99999999999                        456789999999987633 233456799999999999887 6666


Q ss_pred             -cchhHHHHHHHHHHHhCCCCCCCCCc-HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHH
Q 015867          270 -PCDMWSVGCILVELCTGEALFQTHEN-LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK  347 (399)
Q Consensus       270 -~~DiwslG~il~ell~g~~Pf~~~~~-~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  347 (399)
                       ++||||||+++|+|++|..||...+. .+....+.......|..               .  ..|....          
T Consensus       231 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~---------------~--~~~~~~~----------  283 (348)
T 2pml_X          231 AKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLD---------------R--NHFLYPL----------  283 (348)
T ss_dssp             HHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCS---------------S--SSSTTTT----------
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccc---------------h--hhhhccc----------
Confidence             99999999999999999999988766 55555443322222210               0  0000000          


Q ss_pred             hhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                          ...........++.++.+||.+||+.||.+|||+.|+++||||++.+
T Consensus       284 ----~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~  330 (348)
T 2pml_X          284 ----TNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTN  330 (348)
T ss_dssp             ----CC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ----cccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCC
Confidence                00000112246788899999999999999999999999999999864

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=1.5e-46  Score=349.18  Aligned_cols=250  Identities=28%  Similarity=0.440  Sum_probs=212.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .++|++++.||+|+||.||+|.+..+++.||||++....  .....+..|+.+++.+.      |+||+++++++.+.+.
T Consensus        21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~   94 (303)
T 3a7i_A           21 EELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCD------SPYVTKYYGSYLKDTK   94 (303)
T ss_dssp             GGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCC------CTTBCCEEEEEEETTE
T ss_pred             HHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCC------CCCEeEEEEEEecCCe
Confidence            456999999999999999999999999999999997532  33466777888888774      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|.+++...   .+++..+..++.||+.||.|||++||+|+||||+|||+                   
T Consensus        95 ~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~-------------------  152 (303)
T 3a7i_A           95 LWIIMEYLGGGSALDLLEPG---PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLL-------------------  152 (303)
T ss_dssp             EEEEEECCTTEEHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE-------------------
T ss_pred             EEEEEEeCCCCcHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEE-------------------
Confidence            99999999 88999998754   49999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                           +.++.++|+|||++.....   ......||+.|+|||++.+..++.++||||||+++|+|++|..||........
T Consensus       153 -----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  227 (303)
T 3a7i_A          153 -----SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKV  227 (303)
T ss_dssp             -----CTTSCEEECCCTTCEECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             -----CCCCCEEEeecccceecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHH
Confidence                 3466799999999865332   23456799999999999999999999999999999999999999987766555


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.....                                                 ......++..+.+||.+||+.|
T Consensus       228 ~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~li~~~l~~d  258 (303)
T 3a7i_A          228 LFLIPKNNP-------------------------------------------------PTLEGNYSKPLKEFVEACLNKE  258 (303)
T ss_dssp             HHHHHHSCC-------------------------------------------------CCCCSSCCHHHHHHHHHHCCSS
T ss_pred             HHHhhcCCC-------------------------------------------------CCCccccCHHHHHHHHHHcCCC
Confidence            444322110                                                 0112356778899999999999


Q ss_pred             CCCCCCHHHHhCCccccC
Q 015867          379 PSERLTARQALNHPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~  396 (399)
                      |.+|||+.++++||||.+
T Consensus       259 p~~Rps~~~ll~~~~~~~  276 (303)
T 3a7i_A          259 PSFRPTAKELLKHKFILR  276 (303)
T ss_dssp             GGGSCCHHHHTTCHHHHH
T ss_pred             hhhCcCHHHHhhChhhhc
Confidence            999999999999999964

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=2.3e-46  Score=352.36  Aligned_cols=255  Identities=23%  Similarity=0.268  Sum_probs=207.2

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+..|+++++.+.     .|+||+++++++...+..
T Consensus         7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~-----~h~~i~~~~~~~~~~~~~   80 (330)
T 2izr_A            7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS-RAPQLHLEYRFYKQLG-----SGDGIPQVYYFGPCGKYN   80 (330)
T ss_dssp             ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC-SSCCHHHHHHHHHHHC-----SCTTSCCEEEEEEETTEE
T ss_pred             EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc-chHHHHHHHHHHHHhh-----CCCCCCEEEEEEecCCcc
Confidence            4578999999999999999999999999999999986532 2346788999999984     369999999999999999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||++++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||++.++.                
T Consensus        81 ~lv~e~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~----------------  143 (330)
T 2izr_A           81 AMVLELLGPSLEDLFDLCD-RTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGN----------------  143 (330)
T ss_dssp             EEEEECCCCBHHHHHHHTT-TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGG----------------
T ss_pred             EEEEEeCCCCHHHHHHHcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCC----------------
Confidence            9999999999999998753 26999999999999999999999999999999999999965431                


Q ss_pred             ccCCCCCceEEeecCCcccCCCC----------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN----------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                         .....+||+|||++......          ....+||+.|+|||++.+..++.++|||||||++|+|++|..||.+.
T Consensus       144 ---~~~~~~kl~DFg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~  220 (330)
T 2izr_A          144 ---KTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGL  220 (330)
T ss_dssp             ---TCTTSEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ---CCCceEEEEEcccceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCcccc
Confidence               12334999999998753221          24568999999999999999999999999999999999999999874


Q ss_pred             Cc---HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          294 EN---LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       294 ~~---~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      +.   .+....+.......+...                                             ....++ ++.+|
T Consensus       221 ~~~~~~~~~~~i~~~~~~~~~~~---------------------------------------------~~~~~p-~~~~l  254 (330)
T 2izr_A          221 KADTLKERYQKIGDTKRATPIEV---------------------------------------------LCENFP-EMATY  254 (330)
T ss_dssp             CCSSHHHHHHHHHHHHHHSCHHH---------------------------------------------HTTTCH-HHHHH
T ss_pred             ccccHHHHHHHHHhhhccCCHHH---------------------------------------------HhccCh-HHHHH
Confidence            43   333344433222212110                                             112344 88999


Q ss_pred             HHHccccCCCCCCCHHHHhC
Q 015867          371 LHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~  390 (399)
                      |.+||..||.+||++.+|++
T Consensus       255 i~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          255 LRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHhCCCCCCCCHHHHHH
Confidence            99999999999999998875

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=5.2e-47  Score=361.97  Aligned_cols=257  Identities=18%  Similarity=0.252  Sum_probs=211.1

Q ss_pred             CccCCCEEEEeeeccccceEEEEEE-----EccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECW-----DRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~-----~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      +...++|++.+.||+|+||.||+|.     +..+++.||||+++..  ......+..|+.+++.+.      |+||++++
T Consensus        67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~~~  140 (367)
T 3l9p_A           67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------HQNIVRCI  140 (367)
T ss_dssp             BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCC------CTTBCCEE
T ss_pred             hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCC------CCCCCeEE
Confidence            3445789999999999999999999     4557889999998642  233445677888888874      59999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKY-----CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      +++...+..++||||+ +++|.+++.....     ..+++..+..++.||+.||+|||++||+||||||+|||++.++  
T Consensus       141 ~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~--  218 (367)
T 3l9p_A          141 GVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG--  218 (367)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS--
T ss_pred             EEEecCCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCC--
Confidence            9999999999999999 8999999987532     3589999999999999999999999999999999999996432  


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCccc-----CCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHH
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  283 (399)
                                         .+..+||+|||++..     .........||+.|+|||++.+..++.++|||||||++|+|
T Consensus       219 -------------------~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~el  279 (367)
T 3l9p_A          219 -------------------PGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI  279 (367)
T ss_dssp             -------------------TTCCEEECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             -------------------CCceEEECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHH
Confidence                               355699999998863     12233456789999999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh
Q 015867          284 CT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR  362 (399)
Q Consensus       284 l~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (399)
                      ++ |..||...+..+....+......                                                 ..+..
T Consensus       280 lt~g~~pf~~~~~~~~~~~i~~~~~~-------------------------------------------------~~~~~  310 (367)
T 3l9p_A          280 FSLGYMPYPSKSNQEVLEFVTSGGRM-------------------------------------------------DPPKN  310 (367)
T ss_dssp             HTTSCCSSTTCCHHHHHHHHHTTCCC-------------------------------------------------CCCTT
T ss_pred             HhCCCCCCCCCCHHHHHHHHHcCCCC-------------------------------------------------CCCcc
Confidence            98 99999988877666555432211                                                 11235


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       363 ~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ++..+.+||.+||+.||.+|||+.++++|.++
T Consensus       311 ~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~  342 (367)
T 3l9p_A          311 CPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  342 (367)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence            67788999999999999999999999998764

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=3.5e-46  Score=348.44  Aligned_cols=260  Identities=28%  Similarity=0.403  Sum_probs=206.5

Q ss_pred             eccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           58 FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        58 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      +.......++|++.+.||+|+||.||+|.+. +++.||||++...   ......+..|+.+++.+.+    .|+||++++
T Consensus        20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~----~~~~iv~~~   94 (313)
T 3cek_A           20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQ----HSDKIIRLY   94 (313)
T ss_dssp             CCEEEETTEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGG----GCTTBCCEE
T ss_pred             eeeeeeccceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccc----cCCceEEEE
Confidence            3334455678999999999999999999875 5888999999643   2334667889999999975    358999999


Q ss_pred             eeeccCCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          135 NWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      +++...+..++|||+.+++|.+++....  .+++..+..++.||+.||.|||++||+||||||+|||++           
T Consensus        95 ~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~-----------  161 (313)
T 3cek_A           95 DYEITDQYIYMVMECGNIDLNSWLKKKK--SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-----------  161 (313)
T ss_dssp             EEEECSSEEEEEECCCSEEHHHHHHHCS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-----------
T ss_pred             EEeecCCEEEEEEecCCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE-----------
Confidence            9999999999999977999999998865  699999999999999999999999999999999999993           


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhC-----------CCCCCcchhHHHHH
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILG-----------LGWSYPCDMWSVGC  278 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~-----------~~~~~~~DiwslG~  278 (399)
                                    ++.+||+|||++......     .....||+.|+|||++.+           ..++.++||||||+
T Consensus       162 --------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~  227 (313)
T 3cek_A          162 --------------DGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGC  227 (313)
T ss_dssp             --------------TTEEEECCCSSSCC--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHH
T ss_pred             --------------CCeEEEeeccccccccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHH
Confidence                          356999999998764332     234579999999999976           46889999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhh
Q 015867          279 ILVELCTGEALFQTHENLE-HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS  357 (399)
Q Consensus       279 il~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      ++|+|++|..||....... ....+...                      ....                          
T Consensus       228 il~el~~g~~pf~~~~~~~~~~~~~~~~----------------------~~~~--------------------------  259 (313)
T 3cek_A          228 ILYYMTYGKTPFQQIINQISKLHAIIDP----------------------NHEI--------------------------  259 (313)
T ss_dssp             HHHHHHHSSCTTTTCCSHHHHHHHHHCT----------------------TSCC--------------------------
T ss_pred             HHHHHHhCCCchhhHHHHHHHHHHHHhc----------------------cccc--------------------------
Confidence            9999999999997654322 11111100                      0000                          


Q ss_pred             ccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       358 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ..+...+.++.+||.+||+.||.+|||+.|+++||||+..
T Consensus       260 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~  299 (313)
T 3cek_A          260 EFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQ  299 (313)
T ss_dssp             CCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC
T ss_pred             CCcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCC
Confidence            1122346778999999999999999999999999999864

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=2e-47  Score=354.76  Aligned_cols=266  Identities=25%  Similarity=0.397  Sum_probs=190.3

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ...++|++.+.||+|+||.||+|.+..+++.||||++....  .....+..|      +.......||||+++++++...
T Consensus        12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e------~~~l~~l~h~~i~~~~~~~~~~   85 (303)
T 2vwi_A           12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKE------IQAMSQCHHPNIVSYYTSFVVK   85 (303)
T ss_dssp             -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------------CCCCCCCTTBCCEEEEEESS
T ss_pred             cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHH------HHHHhhcCCCCEeeEEEEEeec
Confidence            34568999999999999999999998899999999886432  112223334      3444445689999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhc------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRN------KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~------~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      +..++||||+ +++|.+++...      ....+++..+..++.||+.||.|||++||+||||||+|||+           
T Consensus        86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~-----------  154 (303)
T 2vwi_A           86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILL-----------  154 (303)
T ss_dssp             SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEE-----------
T ss_pred             CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEE-----------
Confidence            9999999999 99999999741      22359999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCC--------CCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHH
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--------NHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--------~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell  284 (399)
                                   +.++.++|+|||++.....        ......||+.|+|||++.+ ..++.++||||||+++|+|+
T Consensus       155 -------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~  221 (303)
T 2vwi_A          155 -------------GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELA  221 (303)
T ss_dssp             -------------CTTCCEEECCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHH
T ss_pred             -------------cCCCCEEEEeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHH
Confidence                         3467799999998754321        1234579999999999976 57899999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       285 ~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                      +|..||.................+.                       .+..                 .........++
T Consensus       222 ~g~~pf~~~~~~~~~~~~~~~~~~~-----------------------~~~~-----------------~~~~~~~~~~~  261 (303)
T 2vwi_A          222 TGAAPYHKYPPMKVLMLTLQNDPPS-----------------------LETG-----------------VQDKEMLKKYG  261 (303)
T ss_dssp             HSSCTTTTSCGGGHHHHHHTSSCCC-----------------------TTC----------------------CCCCCCC
T ss_pred             hCCCCCccCchhhHHHHHhccCCCc-----------------------cccc-----------------cccchhhhhhh
Confidence            9999998766544433221111000                       0000                 00011224567


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .++.+||.+||+.||.+|||+.++++||||++..
T Consensus       262 ~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  295 (303)
T 2vwi_A          262 KSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAK  295 (303)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHHTSTTC----
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhhChhhhcCC
Confidence            8899999999999999999999999999999864

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=4e-47  Score=354.63  Aligned_cols=255  Identities=26%  Similarity=0.456  Sum_probs=199.8

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-------hhHHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      ++.+.++|++.+.||+|+||.||+|++..+++.||||++.....       ....+..|+.++..+...  ..|+||+++
T Consensus        26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~--~~h~~i~~~  103 (312)
T 2iwi_A           26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAG--GGHPGVIRL  103 (312)
T ss_dssp             -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSS--CCCSSBCCE
T ss_pred             hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhccc--CCCCCeeeE
Confidence            46677899999999999999999999999999999999865321       223455688888888532  257999999


Q ss_pred             ceeeccCCeEEEEEcc-C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCC
Q 015867          134 RNWFDYRNHICIVFEK-L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~-~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~  211 (399)
                      ++++...+..++|||+ + +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++.       
T Consensus       104 ~~~~~~~~~~~~v~e~~~~~~~L~~~l~~~~--~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-------  174 (312)
T 2iwi_A          104 LDWFETQEGFMLVLERPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL-------  174 (312)
T ss_dssp             EEEC-----CEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET-------
T ss_pred             EEEEecCCeEEEEEEecCCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC-------
Confidence            9999999999999999 5 899999998765  5999999999999999999999999999999999999941       


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCC-CcchhHHHHHHHHHHHhCCCC
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWS-YPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~-~~~DiwslG~il~ell~g~~P  289 (399)
                                      .++.++|+|||++..... ......||..|+|||++.+..+. .++||||||+++|+|++|+.|
T Consensus       175 ----------------~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p  238 (312)
T 2iwi_A          175 ----------------RRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIP  238 (312)
T ss_dssp             ----------------TTTEEEECCCSSCEECCSSCBCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCS
T ss_pred             ----------------CCCeEEEEEcchhhhcccCcccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCC
Confidence                            466799999999876433 33556799999999999877664 589999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.....      +....                                                  ...+..++.++.+
T Consensus       239 f~~~~~------~~~~~--------------------------------------------------~~~~~~~~~~~~~  262 (312)
T 2iwi_A          239 FERDQE------ILEAE--------------------------------------------------LHFPAHVSPDCCA  262 (312)
T ss_dssp             CCSHHH------HHHTC--------------------------------------------------CCCCTTSCHHHHH
T ss_pred             CCChHH------Hhhhc--------------------------------------------------cCCcccCCHHHHH
Confidence            964211      11100                                                  0112356778899


Q ss_pred             HHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          370 LLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ||.+||+.||.+|||+.|+++||||++..
T Consensus       263 li~~~l~~~p~~Rps~~e~l~~~~~~~~~  291 (312)
T 2iwi_A          263 LIRRCLAPKPSSRPSLEEILLDPWMQTPA  291 (312)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHSTTTCC--
T ss_pred             HHHHHccCChhhCcCHHHHhcChhhcCch
Confidence            99999999999999999999999999754

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=1.8e-46  Score=344.42  Aligned_cols=253  Identities=22%  Similarity=0.358  Sum_probs=210.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec--c
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD--Y  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~--~  139 (399)
                      .++|++.+.||+|+||.||+|.+..+++.||+|++...   ......+..|+.+++.+.      |+||+++++++.  .
T Consensus         5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~   78 (279)
T 2w5a_A            5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK------HPNIVRYYDRIIDRT   78 (279)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCC------CTTBCCEEEEEEEGG
T ss_pred             hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcC------CCCCCeEEEEEecCC
Confidence            46799999999999999999999999999999999753   233456777888888875      599999999774  4


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCCCCcEEEeecccccCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNK--YCPFPVDLVREFGRQLLESVAYMHDLR-----LIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~--~~~~~~~~~~~i~~qi~~~L~~lH~~g-----ivH~Dikp~NIll~~~~~~~~~  211 (399)
                      .+..++||||+ +++|.+++....  ...+++..+..++.||+.||+|||++|     |+|+||||+|||+         
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~---------  149 (279)
T 2w5a_A           79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---------  149 (279)
T ss_dssp             GTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEE---------
T ss_pred             CceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEE---------
Confidence            67899999999 889999997632  235999999999999999999999999     9999999999999         


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC---cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH---SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                                     +.++.+||+|||++.......   ....||+.|+|||++.+..++.++||||||+++|+|++|..
T Consensus       150 ---------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~  214 (279)
T 2w5a_A          150 ---------------DGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP  214 (279)
T ss_dssp             ---------------CSSSCEEECCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSC
T ss_pred             ---------------cCCCCEEEecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCC
Confidence                           346779999999886644332   34578999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||...+..+....+......                                                 ..+..++.++.
T Consensus       215 p~~~~~~~~~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l~  245 (279)
T 2w5a_A          215 PFTAFSQKELAGKIREGKFR-------------------------------------------------RIPYRYSDELN  245 (279)
T ss_dssp             SSCCSSHHHHHHHHHHTCCC-------------------------------------------------CCCTTSCHHHH
T ss_pred             CCcccCHHHHHHHHhhcccc-------------------------------------------------cCCcccCHHHH
Confidence            99987766655555432110                                                 11134677889


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +||.+||+.||.+|||+.|+++|+|+.+
T Consensus       246 ~li~~~l~~~p~~Rps~~~ll~~~~~~~  273 (279)
T 2w5a_A          246 EIITRMLNLKDYHRPSVEEILENPLILE  273 (279)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSTTCCG
T ss_pred             HHHHHHcCCCcccCCCHHHHHhChhhhh
Confidence            9999999999999999999999999986

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=1.4e-46  Score=348.69  Aligned_cols=254  Identities=25%  Similarity=0.374  Sum_probs=198.9

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc----
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY----  139 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~----  139 (399)
                      +.++|++.+.||+|+||.||+|.+..+++.||||++.........+..|+.+++.+.      ||||+++++++.+    
T Consensus         4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~   77 (303)
T 1zy4_A            4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLN------HQYVVRYYAAWLERRNF   77 (303)
T ss_dssp             HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEEHHHHHHHHHHHHHHTTCC------CTTBCCEEEEEEECCCC
T ss_pred             ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEeccHHHHHHHHHHHHHHHhcC------chHHHHHHHHHHhhcch
Confidence            346799999999999999999999999999999999766555566777888877764      6999999987754    


Q ss_pred             ---------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccccc
Q 015867          140 ---------RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIK  209 (399)
Q Consensus       140 ---------~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~  209 (399)
                               .+..|+||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+|+||||+|||+       
T Consensus        78 ~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~-------  149 (303)
T 1zy4_A           78 VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENL-NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI-------  149 (303)
T ss_dssp             CC------CEEEEEEEEECCCSCBHHHHHHHSCG-GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE-------
T ss_pred             hhhhcccccCCceEEEEecCCCCCHHHhhhcccc-ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEE-------
Confidence                     46789999999 8899999986542 57889999999999999999999999999999999999       


Q ss_pred             CCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----------------CCcccccCCCccchhhhhCC-CCCCcc
Q 015867          210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----------------NHSSIVSTRHYRAPEVILGL-GWSYPC  271 (399)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----------------~~~~~~gt~~y~aPE~~~~~-~~~~~~  271 (399)
                                       +.++.++|+|||++.....                 ......||+.|+|||++.+. .++.++
T Consensus       150 -----------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  212 (303)
T 1zy4_A          150 -----------------DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI  212 (303)
T ss_dssp             -----------------CTTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHH
T ss_pred             -----------------cCCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchh
Confidence                             3466799999998865432                 12345789999999999875 689999


Q ss_pred             hhHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhh
Q 015867          272 DMWSVGCILVELCTGEALFQTHE-NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD  350 (399)
Q Consensus       272 DiwslG~il~ell~g~~Pf~~~~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  350 (399)
                      |||||||++|+|++   ||.... ..+....+......                        +|                
T Consensus       213 Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~------------------------~~----------------  249 (303)
T 1zy4_A          213 DMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIE------------------------FP----------------  249 (303)
T ss_dssp             HHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCC------------------------CC----------------
T ss_pred             hHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccc------------------------cC----------------
Confidence            99999999999998   554322 22222222211111                        11                


Q ss_pred             hhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                            .......+..+.+||.+||+.||.+|||+.++++||||+..
T Consensus       250 ------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (303)
T 1zy4_A          250 ------PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK  290 (303)
T ss_dssp             ------TTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred             ------ccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence                  11223456778999999999999999999999999999864

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=4.5e-46  Score=347.16  Aligned_cols=254  Identities=20%  Similarity=0.284  Sum_probs=201.7

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      +...++|++.+.||+|+||+||+|.+  +++.||||++....   .....+..|+++++.+.      |+||+++++++.
T Consensus        33 ~i~~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~  104 (309)
T 3p86_A           33 DIPWCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLR------HPNIVLFMGAVT  104 (309)
T ss_dssp             BCCGGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCC------CTTBCCEEEEEC
T ss_pred             cCChhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEEE
Confidence            33456899999999999999999976  57889999986532   23345777888888885      599999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccCCCCc
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY-CPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      +.+..++||||+ +++|.+++..... ..+++..+..++.||+.||+|||++|  |+||||||+|||+            
T Consensus       105 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll------------  172 (309)
T 3p86_A          105 QPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV------------  172 (309)
T ss_dssp             STTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEE------------
T ss_pred             ECCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEE------------
Confidence            999999999999 8999999986541 13899999999999999999999999  9999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                  +.++.+||+|||++......   .....||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       173 ------------~~~~~~kL~Dfg~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~  240 (309)
T 3p86_A          173 ------------DKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG  240 (309)
T ss_dssp             ------------CTTCCEEECCCC-----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTT
T ss_pred             ------------eCCCcEEECCCCCCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence                        45678999999998753332   345679999999999999999999999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+......                                                ...+..++.++.+||
T Consensus       241 ~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~l~~li  272 (309)
T 3p86_A          241 NLNPAQVVAAVGFKCKR------------------------------------------------LEIPRNLNPQVAAII  272 (309)
T ss_dssp             TSCHHHHHHHHHHSCCC------------------------------------------------CCCCTTSCHHHHHHH
T ss_pred             CCCHHHHHHHHHhcCCC------------------------------------------------CCCCccCCHHHHHHH
Confidence            87766655444221110                                                112245678899999


Q ss_pred             HHccccCCCCCCCHHHHhC--Ccccc
Q 015867          372 HGLLRYDPSERLTARQALN--HPFFR  395 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~--hp~f~  395 (399)
                      .+||+.||.+|||++++++  .++++
T Consensus       273 ~~~l~~dP~~Rps~~~ll~~L~~~~~  298 (309)
T 3p86_A          273 EGCWTNEPWKRPSFATIMDLLRPLIK  298 (309)
T ss_dssp             HHHTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred             HHHccCChhhCcCHHHHHHHHHHHHH
Confidence            9999999999999999987  34443

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=2.9e-46  Score=341.38  Aligned_cols=245  Identities=23%  Similarity=0.371  Sum_probs=208.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.+.||+|+||.||+|.+. +++.||+|++.........+..|+++++.+.      ||||+++++++.+.+..++
T Consensus        10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~~l   82 (269)
T 4hcu_A           10 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLS------HPKLVQLYGVCLEQAPICL   82 (269)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCC------CTTBCCEEEEECSSSSEEE
T ss_pred             hhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccCHHHHHHHHHHHHhCC------CCCEeeEEEEEecCCceEE
Confidence            57999999999999999999876 5777999999876555677888999998885      5999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++                     
T Consensus        83 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---------------------  140 (269)
T 4hcu_A           83 VFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---------------------  140 (269)
T ss_dssp             EEECCTTCBHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---------------------
T ss_pred             EEEeCCCCcHHHHHHhcCc-ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc---------------------
Confidence            99999 8899999976543 699999999999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                         .++.++|+|||++......    .....||+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+..
T Consensus       141 ---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~  217 (269)
T 4hcu_A          141 ---ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV  217 (269)
T ss_dssp             ---GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             ---CCCCEEeccccccccccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHH
Confidence               4567999999998754332    233456788999999999999999999999999999999 99999988776666


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......                                                 ..+..++.++.+||.+||+.||
T Consensus       218 ~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~~l~~~p  248 (269)
T 4hcu_A          218 EDISTGFRL-------------------------------------------------YKPRLASTHVYQIMNHCWRERP  248 (269)
T ss_dssp             HHHHTTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHhcCccC-------------------------------------------------CCCCcCCHHHHHHHHHHccCCc
Confidence            555432111                                                 1123457788999999999999


Q ss_pred             CCCCCHHHHhCC
Q 015867          380 SERLTARQALNH  391 (399)
Q Consensus       380 ~~R~t~~ell~h  391 (399)
                      .+|||+.++++|
T Consensus       249 ~~Rps~~~ll~~  260 (269)
T 4hcu_A          249 EDRPAFSRLLRQ  260 (269)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             ccCcCHHHHHHH
Confidence            999999999875

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=5.1e-46  Score=355.40  Aligned_cols=249  Identities=18%  Similarity=0.286  Sum_probs=205.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-------cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-------QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-------~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      .++|++.+.||+|+||.||+|++.       .++..||||+++...  .....+..|+++++.+.     .||||+++++
T Consensus        80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpnIv~~~~  154 (370)
T 2psq_A           80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINLLG  154 (370)
T ss_dssp             GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSC-----CCTTBCCEEE
T ss_pred             HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhc-----CCCCEeeEEE
Confidence            468999999999999999999864       356789999997532  33456778999998884     3699999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNKY--------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      ++...+.+|+||||+ +++|.+++.....              ..+++..+..++.||+.||+|||++||+||||||+||
T Consensus       155 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NI  234 (370)
T 2psq_A          155 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  234 (370)
T ss_dssp             EECSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGE
T ss_pred             EEccCCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhE
Confidence            999999999999999 8999999987542              2488999999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWS  275 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diws  275 (399)
                      |+                        +.++.+||+|||++......     .....||+.|+|||++.+..++.++||||
T Consensus       235 ll------------------------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws  290 (370)
T 2psq_A          235 LV------------------------TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS  290 (370)
T ss_dssp             EE------------------------CTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHH
T ss_pred             EE------------------------CCCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHH
Confidence            99                        45678999999998753322     23345788999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          276 VGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       276 lG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      |||++|||++ |..||.+.+..+....+.....                                               
T Consensus       291 lG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~-----------------------------------------------  323 (370)
T 2psq_A          291 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHR-----------------------------------------------  323 (370)
T ss_dssp             HHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC-----------------------------------------------
T ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCC-----------------------------------------------
Confidence            9999999999 9999988766555444322110                                               


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                        ...+..++.++.+||.+||+.||.+|||+.|++++
T Consensus       324 --~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~  358 (370)
T 2psq_A          324 --MDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  358 (370)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence              01123567889999999999999999999999863

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=6.8e-46  Score=338.64  Aligned_cols=247  Identities=21%  Similarity=0.306  Sum_probs=208.5

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..++|++.+.||+|+||.||+|.+. ++..||+|++.........+..|+++++.+.      ||||+++++++.+.+..
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~   78 (268)
T 3sxs_A            6 KREEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMSEDEFFQEAQTMMKLS------HPKLVKFYGVCSKEYPI   78 (268)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBCHHHHHHHHHHHHHCC------CTTBCCEEEEECSSSSE
T ss_pred             chhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCcHHHHHHHHHHHHhCC------CCCEeeEEEEEccCCce
Confidence            3468999999999999999999765 5778999999876656677888999999885      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||+                    
T Consensus        79 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~--------------------  137 (268)
T 3sxs_A           79 YIVTEYISNGCLLNYLRSHGK-GLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV--------------------  137 (268)
T ss_dssp             EEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEE--------------------
T ss_pred             EEEEEccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEE--------------------
Confidence            9999999 8999999987542 59999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  297 (399)
                          +.++.++|+|||++.......    ....||+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+
T Consensus       138 ----~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~  213 (268)
T 3sxs_A          138 ----DRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE  213 (268)
T ss_dssp             ----CTTCCEEECCTTCEEECCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             ----CCCCCEEEccCccceecchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHH
Confidence                456789999999987543332    23345678999999999999999999999999999999 999998877766


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+......                                                 ..+..++..+.+||.+||+.
T Consensus       214 ~~~~~~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~~l~~  244 (268)
T 3sxs_A          214 VVLKVSQGHRL-------------------------------------------------YRPHLASDTIYQIMYSCWHE  244 (268)
T ss_dssp             HHHHHHTTCCC-------------------------------------------------CCCTTSCHHHHHHHHHTTCS
T ss_pred             HHHHHHcCCCC-------------------------------------------------CCCCcChHHHHHHHHHHcCC
Confidence            65554332111                                                 11124567789999999999


Q ss_pred             CCCCCCCHHHHhCC
Q 015867          378 DPSERLTARQALNH  391 (399)
Q Consensus       378 dP~~R~t~~ell~h  391 (399)
                      ||.+|||+.++++|
T Consensus       245 ~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          245 LPEKRPTFQQLLSS  258 (268)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhhCcCHHHHHHH
Confidence            99999999999874

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=8.5e-46  Score=340.72  Aligned_cols=247  Identities=21%  Similarity=0.336  Sum_probs=205.9

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      -.++|++++.||+|+||.||+|.+. ++..||||++.........+..|+++++.+.      |+||+++++++.+.+..
T Consensus        22 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~~   94 (283)
T 3gen_A           22 DPKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQLYGVCTKQRPI   94 (283)
T ss_dssp             CGGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHHTCC------CTTBCCEEEEECSSSSE
T ss_pred             CHHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCCHHHHHHHHHHHhcCC------CCCEeeEEEEEecCCCe
Confidence            3468999999999999999999775 6778999999876555677888998888875      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||+                    
T Consensus        95 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili--------------------  153 (283)
T 3gen_A           95 FIITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV--------------------  153 (283)
T ss_dssp             EEEECCCTTCBHHHHHHCGGG-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE--------------------
T ss_pred             EEEEeccCCCcHHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEE--------------------
Confidence            9999999 9999999976332 59999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  297 (399)
                          +.++.++|+|||++......    .....||+.|+|||++.+..++.++||||||+++|+|++ |..||...+..+
T Consensus       154 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~  229 (283)
T 3gen_A          154 ----NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE  229 (283)
T ss_dssp             ----CTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHH
T ss_pred             ----cCCCCEEEccccccccccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhH
Confidence                44667999999998754332    223456788999999999999999999999999999998 999999887766


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+.......                                                 .+..++..+.+||.+||+.
T Consensus       230 ~~~~~~~~~~~~-------------------------------------------------~~~~~~~~l~~li~~~l~~  260 (283)
T 3gen_A          230 TAEHIAQGLRLY-------------------------------------------------RPHLASEKVYTIMYSCWHE  260 (283)
T ss_dssp             HHHHHHTTCCCC-------------------------------------------------CCTTCCHHHHHHHHHTTCS
T ss_pred             HHHHHhcccCCC-------------------------------------------------CCCcCCHHHHHHHHHHccC
Confidence            666554332111                                                 1134567789999999999


Q ss_pred             CCCCCCCHHHHhCC
Q 015867          378 DPSERLTARQALNH  391 (399)
Q Consensus       378 dP~~R~t~~ell~h  391 (399)
                      ||.+|||+.++++|
T Consensus       261 ~p~~Rps~~~ll~~  274 (283)
T 3gen_A          261 KADERPTFKILLSN  274 (283)
T ss_dssp             SGGGSCCHHHHHHH
T ss_pred             ChhHCcCHHHHHHH
Confidence            99999999999875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=8.3e-46  Score=353.33  Aligned_cols=262  Identities=15%  Similarity=0.184  Sum_probs=200.8

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccC-----CeEEEEEEEecchhhhHHHHHHHHHHHHhhh---------cCCCCCc
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQT-----QERVAIKVVRSIRKYRDAAMIEIDVLQHLAK---------NDKGGSS  128 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~-----~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~---------~~~~~~~  128 (399)
                      ...++|++.+.||+|+||.||+|.+..+     ++.||||++....   .....|+++++.+.+         .....|+
T Consensus        32 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~  108 (364)
T 3op5_A           32 MAAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDN---GPLFTELKFYQRAAKPEQIQKWIRTRKLKYL  108 (364)
T ss_dssp             TTCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTC---HHHHHHHHHHHHHCCHHHHHHHHHHTTCSCC
T ss_pred             cCCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccc---hhHHHHHHHHHhhhhhHHHHHHHHHhhccCC
Confidence            3456899999999999999999998764     5889999986542   334556666555543         4566899


Q ss_pred             ceeeeceeeccC----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEee
Q 015867          129 HCVQIRNWFDYR----NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVS  204 (399)
Q Consensus       129 ~iv~~~~~~~~~----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~  204 (399)
                      ||+++++++...    .+.|+||||+|++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.
T Consensus       109 ~iv~~~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~  187 (364)
T 3op5_A          109 GVPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAK-RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNY  187 (364)
T ss_dssp             CSCCEEEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEES
T ss_pred             CCCeEEeeeeeccCCcceEEEEEeCCCCCHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEec
Confidence            999999988764    56899999999999999987532 6999999999999999999999999999999999999963


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC----------CCcccccCCCccchhhhhCCCCCCcchhH
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ----------NHSSIVSTRHYRAPEVILGLGWSYPCDMW  274 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  274 (399)
                                            +.++.+||+|||++.....          .....+||+.|+|||++.+..++.++|||
T Consensus       188 ----------------------~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~  245 (364)
T 3op5_A          188 ----------------------KNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLE  245 (364)
T ss_dssp             ----------------------SCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHH
T ss_pred             ----------------------CCCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHH
Confidence                                  2467899999999854221          11345699999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCcHHH-HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhh
Q 015867          275 SVGCILVELCTGEALFQTHENLEH-LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK  353 (399)
Q Consensus       275 slG~il~ell~g~~Pf~~~~~~~~-~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  353 (399)
                      ||||++|+|++|..||.+...... ..............+...                                     
T Consensus       246 slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------  288 (364)
T 3op5_A          246 ILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDK-------------------------------------  288 (364)
T ss_dssp             HHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHH-------------------------------------
T ss_pred             HHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHH-------------------------------------
Confidence            999999999999999986333222 221111110000000000                                     


Q ss_pred             hhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       354 ~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                         ......++.++.+||..||..||.+||++.+|++
T Consensus       289 ---~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          289 ---CFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             ---HSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ---hcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence               0011456788999999999999999999998875

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=6.2e-46  Score=353.28  Aligned_cols=251  Identities=21%  Similarity=0.300  Sum_probs=204.6

Q ss_pred             cCCCEEEEeeeccccceEEEEEE-----EccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECW-----DRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~-----~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      ..++|++.+.||+|+||.||+|+     +..+++.||||+++...  .....+..|++++..+.     +||||++++++
T Consensus        20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpniv~~~~~   94 (359)
T 3vhe_A           20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-----HHLNVVNLLGA   94 (359)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-----CCTTBCCEEEE
T ss_pred             cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhc-----CCcceeeeeee
Confidence            35689999999999999999998     55677999999997532  23456788999999885     47999999999


Q ss_pred             eccCC-eEEEEEccC-CCCHHHHHHhcCC---------------------------------------------------
Q 015867          137 FDYRN-HICIVFEKL-GPSLFDFLKRNKY---------------------------------------------------  163 (399)
Q Consensus       137 ~~~~~-~~~lv~e~~-~~~L~~~l~~~~~---------------------------------------------------  163 (399)
                      +.+.+ ..++||||+ +++|.+++.....                                                   
T Consensus        95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  174 (359)
T 3vhe_A           95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS  174 (359)
T ss_dssp             ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred             eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence            88754 599999999 8999999986542                                                   


Q ss_pred             -------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCC
Q 015867          164 -------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS  230 (399)
Q Consensus       164 -------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (399)
                                   ..+++..+..++.||+.||.|||++||+||||||+|||++                        .++
T Consensus       175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~------------------------~~~  230 (359)
T 3vhe_A          175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS------------------------EKN  230 (359)
T ss_dssp             ---------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC------------------------GGG
T ss_pred             hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc------------------------CCC
Confidence                         1288999999999999999999999999999999999994                        456


Q ss_pred             ceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHH
Q 015867          231 AIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMER  304 (399)
Q Consensus       231 ~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~  304 (399)
                      .+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|+|++ |..||.+....+.......
T Consensus       231 ~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  310 (359)
T 3vhe_A          231 VVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK  310 (359)
T ss_dssp             CEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH
T ss_pred             cEEEEeccceeeecccccchhccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHH
Confidence            7999999998754222     234568899999999999999999999999999999998 9999988665444333322


Q ss_pred             HhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCC
Q 015867          305 ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLT  384 (399)
Q Consensus       305 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t  384 (399)
                      ....                                                ...+..++.++.+||.+||+.||.+|||
T Consensus       311 ~~~~------------------------------------------------~~~~~~~~~~l~~li~~~l~~dP~~Rps  342 (359)
T 3vhe_A          311 EGTR------------------------------------------------MRAPDYTTPEMYQTMLDCWHGEPSQRPT  342 (359)
T ss_dssp             HTCC------------------------------------------------CCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred             cCCC------------------------------------------------CCCCCCCCHHHHHHHHHHccCChhhCCC
Confidence            2111                                                0112346778899999999999999999


Q ss_pred             HHHHhCC
Q 015867          385 ARQALNH  391 (399)
Q Consensus       385 ~~ell~h  391 (399)
                      +.|+++|
T Consensus       343 ~~ell~~  349 (359)
T 3vhe_A          343 FSELVEH  349 (359)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=6.6e-46  Score=342.25  Aligned_cols=250  Identities=19%  Similarity=0.298  Sum_probs=213.7

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      +...++|++.+.||+|+||.||+|.+..+++.||+|++.........+..|+++++.+.      |+||+++++++.+.+
T Consensus         9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~   82 (288)
T 3kfa_A            9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNLVQLLGVCTREP   82 (288)
T ss_dssp             BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCC------CTTBCCEEEEECSSS
T ss_pred             cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEEccCC
Confidence            44567899999999999999999999999999999999876666677888999999885      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+||+++                 
T Consensus        83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~-----------------  145 (288)
T 3kfa_A           83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG-----------------  145 (288)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC-----------------
T ss_pred             CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc-----------------
Confidence            999999999 89999999887666799999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCc
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHEN  295 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~  295 (399)
                             .++.++|+|||++.......    ....+|+.|+|||++.+..++.++||||||+++|+|++ |..||...+.
T Consensus       146 -------~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~  218 (288)
T 3kfa_A          146 -------ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL  218 (288)
T ss_dssp             -------GGGCEEECCCCGGGTSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred             -------CCCCEEEccCccceeccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence                   45679999999987654332    23456888999999999999999999999999999999 9999987766


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      ......+.....                                                 ...+..++..+.+||.+||
T Consensus       219 ~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~li~~~l  249 (288)
T 3kfa_A          219 SQVYELLEKDYR-------------------------------------------------MERPEGCPEKVYELMRACW  249 (288)
T ss_dssp             GGHHHHHHTTCC-------------------------------------------------CCCCTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHhccCC-------------------------------------------------CCCCCCCCHHHHHHHHHHh
Confidence            554443322110                                                 1122456788999999999


Q ss_pred             ccCCCCCCCHHHHhC
Q 015867          376 RYDPSERLTARQALN  390 (399)
Q Consensus       376 ~~dP~~R~t~~ell~  390 (399)
                      ..||.+|||+.++++
T Consensus       250 ~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          250 QWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCChhhCcCHHHHHH
Confidence            999999999999876

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=6.8e-46  Score=348.46  Aligned_cols=249  Identities=22%  Similarity=0.274  Sum_probs=204.7

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCC---eEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQ---ERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~---~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      +...++|++.+.||+|+||.||+|.+..++   ..||||+++..  ......+..|+.+++.+.      |+||++++++
T Consensus        45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~  118 (325)
T 3kul_A           45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFD------HPNIIRLEGV  118 (325)
T ss_dssp             BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCC------CTTBCCEEEE
T ss_pred             ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCC------CCCCCcEEEE
Confidence            344578999999999999999999987554   45999999753  233455677888877764      6999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +.+.+..++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||+             
T Consensus       119 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll-------------  184 (325)
T 3kul_A          119 VTRGRLAMIVTEYMENGSLDTFLRTHDG-QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLV-------------  184 (325)
T ss_dssp             ECGGGCCEEEEECCTTCBHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE-------------
T ss_pred             EEeCCccEEEeeCCCCCcHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE-------------
Confidence            99999999999999 8999999976533 69999999999999999999999999999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEA  288 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~  288 (399)
                                 +.++.++|+|||++.......      ....+|+.|+|||++.+..++.++||||||+++|+|++ |..
T Consensus       185 -----------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~  253 (325)
T 3kul_A          185 -----------DSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER  253 (325)
T ss_dssp             -----------CTTCCEEECCCSSCEECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCC
T ss_pred             -----------CCCCCEEECCCCcccccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCC
Confidence                       456789999999987643321      22345778999999999999999999999999999999 999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||...+..+....+......                                                 ..+..++..+.
T Consensus       254 p~~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~l~  284 (325)
T 3kul_A          254 PYWNMTNRDVISSVEEGYRL-------------------------------------------------PAPMGCPHALH  284 (325)
T ss_dssp             TTTTSCHHHHHHHHHTTCCC-------------------------------------------------CCCTTCCHHHH
T ss_pred             CcccCCHHHHHHHHHcCCCC-------------------------------------------------CCCCCcCHHHH
Confidence            99888777666555432111                                                 11235678899


Q ss_pred             HHHHHccccCCCCCCCHHHHhC
Q 015867          369 DLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~  390 (399)
                      +||.+||..||.+|||+.++++
T Consensus       285 ~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          285 QLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHccCChhhCcCHHHHHH
Confidence            9999999999999999999875

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=6.3e-46  Score=346.26  Aligned_cols=252  Identities=17%  Similarity=0.285  Sum_probs=204.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc-hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI-RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      .++|++.+.||+|+||+||+|.+..+++.||+|++... ......+..|+++++.+.      ||||+++++++.+++..
T Consensus         9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~~~~~   82 (310)
T 3s95_A            9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE------HPNVLKFIGVLYKDKRL   82 (310)
T ss_dssp             GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCC------CTTBCCEEEEEEETTEE
T ss_pred             hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCC------CcCcccEEEEEecCCee
Confidence            35799999999999999999999999999999988543 334556777888887774      69999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||+                    
T Consensus        83 ~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~--------------------  141 (310)
T 3s95_A           83 NFITEYIKGGTLRGIIKSMDS-QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV--------------------  141 (310)
T ss_dssp             EEEEECCTTCBHHHHHHHCCT-TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEE--------------------
T ss_pred             EEEEEecCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEE--------------------
Confidence            9999999 8999999987533 69999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCCC-----------------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNH-----------------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~-----------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  285 (399)
                          +.++.+||+|||++.......                 ...+||+.|+|||++.+..++.++||||||+++|+|++
T Consensus       142 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~  217 (310)
T 3s95_A          142 ----RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIG  217 (310)
T ss_dssp             ----CTTSCEEECCCTTCEECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred             ----CCCCCEEEeecccceecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhc
Confidence                456779999999986532221                 14579999999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |..||.........                                 .  ...    .        ........++.++.
T Consensus       218 g~~~~~~~~~~~~~---------------------------------~--~~~----~--------~~~~~~~~~~~~~~  250 (310)
T 3s95_A          218 RVNADPDYLPRTMD---------------------------------F--GLN----V--------RGFLDRYCPPNCPP  250 (310)
T ss_dssp             TCCSSTTTSCBCTT---------------------------------S--SBC----H--------HHHHHHTCCTTCCT
T ss_pred             CCCCCcchhhhHHH---------------------------------H--hhh----h--------hccccccCCCCCCH
Confidence            99998653221000                                 0  000    0        00001122356778


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      .+.+||.+||+.||.+|||+.++++  ||++
T Consensus       251 ~l~~li~~~l~~dP~~Rps~~~l~~--~L~~  279 (310)
T 3s95_A          251 SFFPITVRCCDLDPEKRPSFVKLEH--WLET  279 (310)
T ss_dssp             THHHHHHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred             HHHHHHHHHccCChhhCcCHHHHHH--HHHH
Confidence            8999999999999999999999986  5543

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=4.4e-45  Score=337.92  Aligned_cols=255  Identities=22%  Similarity=0.276  Sum_probs=204.3

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.++|++.+.||+|+||.||+|++..+++.||||++.... ....+..|+.+++.+.+     ++++..+..++...+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~-----~~~i~~~~~~~~~~~~   79 (296)
T 3uzp_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQG-----GVGIPTIRWCGAEGDY   79 (296)
T ss_dssp             EETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS-SCCHHHHHHHHHHHHTT-----STTCCCEEEEEEETTE
T ss_pred             eeccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc-chhHHHHHHHHHHHhhc-----CCCCCccccccCCCCc
Confidence            45678999999999999999999999999999999986533 23567889999999975     2345555555567889


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .++||||++++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.+                 
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~-----------------  141 (296)
T 3uzp_A           80 NVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-----------------  141 (296)
T ss_dssp             EEEEEECCCCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG-----------------
T ss_pred             eEEEEEecCCCHHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecC-----------------
Confidence            999999999999999985433 69999999999999999999999999999999999999532                 


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                          +.++.+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|+.||..
T Consensus       142 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 3uzp_A          142 ----KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             ----GGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ----CCCCeEEEeeCCCcccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence                24678999999998653322          2456799999999999999999999999999999999999999986


Q ss_pred             CCc---HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          293 HEN---LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       293 ~~~---~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      .+.   .+....+.......+.                                             ......++.++.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~l~~  252 (296)
T 3uzp_A          218 LKAATKRQKYERISEKKMSTPI---------------------------------------------EVLCKGYPSEFAT  252 (296)
T ss_dssp             CCCSSSSSHHHHHHHHHHHSCH---------------------------------------------HHHTTTSCHHHHH
T ss_pred             cCchhhhhhhhhhcccccCCch---------------------------------------------HHHHhhCCHHHHH
Confidence            332   2233333222111111                                             1112456788999


Q ss_pred             HHHHccccCCCCCCCHHHHhC
Q 015867          370 LLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~  390 (399)
                      ||.+||+.||.+|||+.++++
T Consensus       253 li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          253 YLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHhcCcCcCCCHHHHHH
Confidence            999999999999999999875

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=9.6e-46  Score=342.23  Aligned_cols=254  Identities=25%  Similarity=0.376  Sum_probs=202.3

Q ss_pred             EEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEE
Q 015867           69 KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVF  147 (399)
Q Consensus        69 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~  147 (399)
                      .....||+|+||.||+|.+..+++.||||++.... .....+..|+.+++.+.      |+||+++++++...+..++||
T Consensus        25 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~~~~~~~lv~   98 (295)
T 2clq_A           25 GDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK------HKNIVQYLGSFSENGFIKIFM   98 (295)
T ss_dssp             SSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCC------CTTBCCEEEEEEETTEEEEEE
T ss_pred             CCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCC------CCCEeeEeeEEEeCCcEEEEE
Confidence            33448999999999999999999999999987532 33455777888888774      699999999999999999999


Q ss_pred             ccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          148 EKL-GPSLFDFLKRNK-YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       148 e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      ||+ +++|.+++.... ...+++..+..++.||+.||.|||++||+|+||||+|||++.                     
T Consensus        99 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~---------------------  157 (295)
T 2clq_A           99 EQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT---------------------  157 (295)
T ss_dssp             ECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET---------------------
T ss_pred             EeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC---------------------
Confidence            999 899999998753 234678999999999999999999999999999999999942                     


Q ss_pred             CCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCC--CCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLG--WSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~--~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                        .++.++|+|||++.....   ......||+.|+|||++.+..  ++.++||||||+++|+|++|..||..........
T Consensus       158 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~  235 (295)
T 2clq_A          158 --YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM  235 (295)
T ss_dssp             --TTCCEEECCTTTCEESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHH
T ss_pred             --CCCCEEEeecccccccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHH
Confidence              256899999999875432   234567999999999997653  8899999999999999999999997644432211


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .......                                               .....+..++.++.+||.+||+.||.
T Consensus       236 ~~~~~~~-----------------------------------------------~~~~~~~~~~~~~~~li~~~l~~dp~  268 (295)
T 2clq_A          236 FKVGMFK-----------------------------------------------VHPEIPESMSAEAKAFILKCFEPDPD  268 (295)
T ss_dssp             HHHHHHC-----------------------------------------------CCCCCCTTSCHHHHHHHHHTTCSSTT
T ss_pred             Hhhcccc-----------------------------------------------ccccccccCCHHHHHHHHHHccCChh
Confidence            1111000                                               00112245678899999999999999


Q ss_pred             CCCCHHHHhCCccccCCC
Q 015867          381 ERLTARQALNHPFFRNLN  398 (399)
Q Consensus       381 ~R~t~~ell~hp~f~~~~  398 (399)
                      +|||+.++++||||+...
T Consensus       269 ~Rps~~~ll~~~~~~~~~  286 (295)
T 2clq_A          269 KRACANDLLVDEFLKVSS  286 (295)
T ss_dssp             TSCCHHHHHTSGGGCC--
T ss_pred             hCCCHHHHhcChhhhhcc
Confidence            999999999999998753

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=6.6e-46  Score=348.06  Aligned_cols=257  Identities=18%  Similarity=0.247  Sum_probs=190.4

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCe---EEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQE---RVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~---~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      ....++|++.+.||+|+||.||+|.+..++.   .||||+++..   ......+..|+++++.+.      |+||+++++
T Consensus        19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~   92 (323)
T 3qup_A           19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFD------HPHVAKLVG   92 (323)
T ss_dssp             BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCC------CTTBCCCCE
T ss_pred             ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCC------CCceehhhc
Confidence            4446789999999999999999999877765   7999998643   233455667777777664      699999999


Q ss_pred             eeccCCeE------EEEEccC-CCCHHHHHHhcCC----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEee
Q 015867          136 WFDYRNHI------CIVFEKL-GPSLFDFLKRNKY----CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVS  204 (399)
Q Consensus       136 ~~~~~~~~------~lv~e~~-~~~L~~~l~~~~~----~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~  204 (399)
                      ++......      ++||||+ +++|.+++.....    ..+++..+..++.||+.||.|||++||+||||||+|||+  
T Consensus        93 ~~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli--  170 (323)
T 3qup_A           93 VSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCML--  170 (323)
T ss_dssp             EEECC-------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--
T ss_pred             eeeccccccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEE--
Confidence            98876554      9999999 8899999965321    148999999999999999999999999999999999999  


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHH
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  279 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  279 (399)
                                            +.++.+||+|||++......     .....+|+.|+|||++.+..++.++|||||||+
T Consensus       171 ----------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  228 (323)
T 3qup_A          171 ----------------------AEDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVT  228 (323)
T ss_dssp             ----------------------CTTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             ----------------------cCCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHH
Confidence                                  34678999999998753322     123456788999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          280 LVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       280 l~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      +|+|++ |..||.+.+..+....+.....                                                 ..
T Consensus       229 l~ell~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~~  259 (323)
T 3qup_A          229 MWEIMTRGQTPYAGIENAEIYNYLIGGNR-------------------------------------------------LK  259 (323)
T ss_dssp             HHHHHTTSCCTTTTCCGGGHHHHHHTTCC-------------------------------------------------CC
T ss_pred             HHHHHhCCCCCccccChHHHHHHHhcCCC-------------------------------------------------CC
Confidence            999999 9999998777665554433211                                                 01


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCC-------HHHHhCCccccCC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLT-------ARQALNHPFFRNL  397 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t-------~~ell~hp~f~~~  397 (399)
                      .++.++.++.+||.+||+.||.+|||       ++++++|||+...
T Consensus       260 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~  305 (323)
T 3qup_A          260 QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLST  305 (323)
T ss_dssp             CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC------
T ss_pred             CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCC
Confidence            12456788999999999999999999       7889999999864

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=2e-46  Score=364.87  Aligned_cols=256  Identities=21%  Similarity=0.302  Sum_probs=196.5

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      +|.+.+.||+|+||+|+. ....+++.||||++....  ......|+++++.+.     .||||+++++++.+.+..|+|
T Consensus        25 ~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~--~~~~~~E~~~l~~l~-----~HpnIv~l~~~~~~~~~~~lv   96 (432)
T 3p23_A           25 SFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPEC--FSFADREVQLLRESD-----EHPNVIRYFCTEKDRQFQYIA   96 (432)
T ss_dssp             EEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTT--EEECHHHHHHHHHSC-----CCTTBCCEEEEEEETTEEEEE
T ss_pred             EEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHH--HHHHHHHHHHHHhcc-----CCCCcCeEEEEEecCCEEEEE
Confidence            699999999999999764 345678899999986432  234567888888874     479999999999999999999


Q ss_pred             EccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccC
Q 015867          147 FEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCL  226 (399)
Q Consensus       147 ~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  226 (399)
                      |||++++|.+++..... .+.+..+..++.||+.||+|||++||+||||||+|||+..++                   .
T Consensus        97 ~E~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~-------------------~  156 (432)
T 3p23_A           97 IELCAATLQEYVEQKDF-AHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPN-------------------A  156 (432)
T ss_dssp             EECCSEEHHHHHHSSSC-CCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCB-------------------T
T ss_pred             EECCCCCHHHHHHhcCC-CccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCC-------------------C
Confidence            99998899999987653 355556778999999999999999999999999999996432                   1


Q ss_pred             CCCCceEEeecCCcccCCC------CCcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcH
Q 015867          227 PKSSAIKLIDFGSTAFDNQ------NHSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCT-GEALFQTHENL  296 (399)
Q Consensus       227 ~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~  296 (399)
                      +....+||+|||++.....      .....+||+.|+|||++.   ...++.++|||||||++|+|++ |..||......
T Consensus       157 ~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~  236 (432)
T 3p23_A          157 HGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR  236 (432)
T ss_dssp             TTBCCEEECCTTEEECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH
T ss_pred             CCceeEEEecccceeeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH
Confidence            2345688999999876432      234567999999999998   4567889999999999999999 99999655443


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      .....+    ....                    ...                       .......+..+.+||.+||+
T Consensus       237 ~~~~~~----~~~~--------------------~~~-----------------------~~~~~~~~~~~~~li~~~L~  269 (432)
T 3p23_A          237 QANILL----GACS--------------------LDC-----------------------LHPEKHEDVIARELIEKMIA  269 (432)
T ss_dssp             HHHHHT----TCCC--------------------CTT-----------------------SCTTCHHHHHHHHHHHHHSC
T ss_pred             HHHHHh----ccCC--------------------ccc-----------------------cCccccccHHHHHHHHHHHh
Confidence            221110    0000                    000                       00112345668899999999


Q ss_pred             cCCCCCCCHHHHhCCccccCC
Q 015867          377 YDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .||.+|||+.|+++||||+++
T Consensus       270 ~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          270 MDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             SSGGGSCCHHHHHTSTTTCCH
T ss_pred             CCHhhCCCHHHHHhCccccCh
Confidence            999999999999999999864

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=2.2e-45  Score=343.41  Aligned_cols=255  Identities=25%  Similarity=0.383  Sum_probs=187.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhh--HHHHHHH-HHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR--DAAMIEI-DVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--~~~~~e~-~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.......  .....|. .+++.      ..|+||+++++++...+
T Consensus        24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~------~~h~~i~~~~~~~~~~~   97 (318)
T 2dyl_A           24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS------HDCPYIVQCFGTFITNT   97 (318)
T ss_dssp             GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHT------TTCTTBCCEEEEEECSS
T ss_pred             hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHh------cCCCceeeEEEEEecCC
Confidence            457999999999999999999999999999999997543221  1222222 22332      25799999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+++.+..+..... ..+++..+..++.||+.||.|||++ ||+|+||||+|||+                  
T Consensus        98 ~~~lv~e~~~~~~~~l~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~------------------  158 (318)
T 2dyl_A           98 DVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILL------------------  158 (318)
T ss_dssp             EEEEEECCCSEEHHHHHHHHT-SCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEE------------------
T ss_pred             cEEEEEeccCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEE------------------
Confidence            999999999777777665432 2699999999999999999999996 99999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                            +.++.+||+|||++.....  ......||+.|+|||++.     ...++.++||||||+++|+|++|..||...
T Consensus       159 ------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  232 (318)
T 2dyl_A          159 ------DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC  232 (318)
T ss_dssp             ------CTTSCEEECCCTTC--------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTC
T ss_pred             ------CCCCCEEEEECCCchhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCC
Confidence                  4467799999998865332  233457999999999995     457899999999999999999999999874


Q ss_pred             C-cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          294 E-NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       294 ~-~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      . ..+....+.....+                       .+|                        ....++.++.+||.
T Consensus       233 ~~~~~~~~~~~~~~~~-----------------------~~~------------------------~~~~~~~~l~~li~  265 (318)
T 2dyl_A          233 KTDFEVLTKVLQEEPP-----------------------LLP------------------------GHMGFSGDFQSFVK  265 (318)
T ss_dssp             CSHHHHHHHHHHSCCC-----------------------CCC------------------------SSSCCCHHHHHHHH
T ss_pred             CccHHHHHHHhccCCC-----------------------CCC------------------------ccCCCCHHHHHHHH
Confidence            3 33334333321110                       000                        01245778899999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||+.||.+|||+.++++||||++.
T Consensus       266 ~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          266 DCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             HHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             HHccCChhHCcCHHHHhhCHHHHhc
Confidence            9999999999999999999999864

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=100.00  E-value=3.8e-45  Score=338.23  Aligned_cols=255  Identities=22%  Similarity=0.277  Sum_probs=199.6

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+..|..+++.+.+     ++++..+..++...+.
T Consensus         6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~e~~~l~~l~~-----~~~i~~~~~~~~~~~~   79 (296)
T 4hgt_A            6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQG-----GVGIPTIRWCGAEGDY   79 (296)
T ss_dssp             -----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC----CCCHHHHHHHHHHHTT-----STTCCCEEEEEEETTE
T ss_pred             ccCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc-cchHHHHHHHHHHHhcC-----CCCCCeeeeecCCCCc
Confidence            45678999999999999999999999999999999875432 23457789999999875     3455555666677889


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .++||||++++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||+..+                 
T Consensus        80 ~~lv~e~~~~~L~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~-----------------  141 (296)
T 4hgt_A           80 NVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG-----------------  141 (296)
T ss_dssp             EEEEEECCCCBHHHHHHHTTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCG-----------------
T ss_pred             eEEEEEccCCCHHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeecc-----------------
Confidence            999999999999999985433 59999999999999999999999999999999999999422                 


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                          +.++.+||+|||++......          .....||+.|+|||++.+..++.++|||||||++|+|++|+.||.+
T Consensus       142 ----~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  217 (296)
T 4hgt_A          142 ----KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG  217 (296)
T ss_dssp             ----GGTTCEEECCCTTCEECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ----CCCCeEEEecCccceeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcc
Confidence                24677999999998653322          2356799999999999999999999999999999999999999976


Q ss_pred             CCcH---HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          293 HENL---EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       293 ~~~~---~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      .+..   .....+.......|.                                             ......++.++.+
T Consensus       218 ~~~~~~~~~~~~~~~~~~~~~~---------------------------------------------~~~~~~~~~~l~~  252 (296)
T 4hgt_A          218 LKAATKRQKYERISEKKMSTPI---------------------------------------------EVLCKGYPSEFAT  252 (296)
T ss_dssp             CCCSSSSSHHHHHHHHHHHSCH---------------------------------------------HHHTTTSCHHHHH
T ss_pred             cchhhhhhhhhhhhcccccchh---------------------------------------------hhhhccCCHHHHH
Confidence            4332   222222221111110                                             1112356788999


Q ss_pred             HHHHccccCCCCCCCHHHHhC
Q 015867          370 LLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~  390 (399)
                      ||.+||+.||.+|||+.++++
T Consensus       253 li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          253 YLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HHHHHHTSCTTCCCCHHHHHH
T ss_pred             HHHHHHhcCCCCCCCHHHHHH
Confidence            999999999999999999876

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.9e-45  Score=350.22  Aligned_cols=251  Identities=18%  Similarity=0.279  Sum_probs=208.7

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEcc-------CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQ-------TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      ...++|++.+.||+|+||.||+|.+..       .+..||||+++...  .....+..|+++++.+.     .|+||+++
T Consensus        66 i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpnIv~~  140 (382)
T 3tt0_A           66 LPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINL  140 (382)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-----CCTTBCCE
T ss_pred             cchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhc-----CCchhhhh
Confidence            345789999999999999999998653       34679999997532  23356778999999884     36999999


Q ss_pred             ceeeccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCC
Q 015867          134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKY--------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPE  198 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~  198 (399)
                      ++++...+..++||||+ +++|.+++.....              ..+++..+..++.||+.||+|||++||+||||||+
T Consensus       141 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~  220 (382)
T 3tt0_A          141 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAAR  220 (382)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGG
T ss_pred             eeeeccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcc
Confidence            99999999999999999 8899999987542              35999999999999999999999999999999999


Q ss_pred             cEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCCCCcchh
Q 015867          199 NILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYPCDM  273 (399)
Q Consensus       199 NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Di  273 (399)
                      |||+                        +.++.+||+|||++.....     ......||+.|+|||++.+..++.++||
T Consensus       221 NIll------------------------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di  276 (382)
T 3tt0_A          221 NVLV------------------------TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDV  276 (382)
T ss_dssp             GEEE------------------------CTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHH
T ss_pred             eEEE------------------------cCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHH
Confidence            9999                        4467899999999875432     2234467889999999999999999999


Q ss_pred             HHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhh
Q 015867          274 WSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL  352 (399)
Q Consensus       274 wslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  352 (399)
                      |||||++|+|++ |..||.+.+..+....+......                                            
T Consensus       277 wslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~--------------------------------------------  312 (382)
T 3tt0_A          277 WSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRM--------------------------------------------  312 (382)
T ss_dssp             HHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCC--------------------------------------------
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC--------------------------------------------
Confidence            999999999999 99999887766655544332110                                            


Q ss_pred             hhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          353 KNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       353 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                           ..+..++.++.+||.+||+.||.+|||+.|++++
T Consensus       313 -----~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          313 -----DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             -----CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -----CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence                 1123567889999999999999999999999874

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=3.6e-45  Score=356.76  Aligned_cols=271  Identities=24%  Similarity=0.305  Sum_probs=201.0

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ..+.+.|.+.+.||+|+||+||.+ ...+|+.||||++...  .......|+.+++.+.     .||||+++++++.+.+
T Consensus        11 ~~l~~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~--~~~~~~~E~~~l~~l~-----~HpnIv~~~~~~~~~~   82 (434)
T 2rio_A           11 QSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID--FCDIALMEIKLLTESD-----DHPNVIRYYCSETTDR   82 (434)
T ss_dssp             CSCSSCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG--GHHHHHHHHHHHHHHT-----TSTTBCCEEEEEECSS
T ss_pred             hhhhheeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH--HHHHHHHHHHHHHhcc-----CCCCcCeEEEEEecCC
Confidence            445667888999999999999875 4567899999998653  2345677888888764     4799999999999999


Q ss_pred             eEEEEEccCCCCHHHHHHhcCCCC-----CCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          142 HICIVFEKLGPSLFDFLKRNKYCP-----FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       142 ~~~lv~e~~~~~L~~~l~~~~~~~-----~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      ..|+||||++++|.+++.......     .++..+..++.||+.||+|||++||+||||||+|||++.++.......   
T Consensus        83 ~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~---  159 (434)
T 2rio_A           83 FLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQ---  159 (434)
T ss_dssp             EEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCT---
T ss_pred             eEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccc---
Confidence            999999999889999998754211     122345679999999999999999999999999999976542111000   


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhC-------CCCCCcchhHHHHHHHHH
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILG-------LGWSYPCDMWSVGCILVE  282 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~-------~~~~~~~DiwslG~il~e  282 (399)
                              ..+.+..+||+|||++......       ....+||+.|+|||++.+       ..++.++|||||||++|+
T Consensus       160 --------~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~e  231 (434)
T 2rio_A          160 --------TGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYY  231 (434)
T ss_dssp             --------TCCCSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHH
T ss_pred             --------cCCCceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHH
Confidence                    0134668999999998764332       234579999999999976       578999999999999999


Q ss_pred             HHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccch
Q 015867          283 LCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD  361 (399)
Q Consensus       283 ll~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (399)
                      |++ |..||......+  ..+.......+                                           ........
T Consensus       232 llt~g~~Pf~~~~~~~--~~i~~~~~~~~-------------------------------------------~~~~~~~~  266 (434)
T 2rio_A          232 ILSKGKHPFGDKYSRE--SNIIRGIFSLD-------------------------------------------EMKCLHDR  266 (434)
T ss_dssp             HHTTSCCTTCSTTTHH--HHHHHTCCCCC-------------------------------------------CCTTCCCH
T ss_pred             HHhCCCCCCCCchhhH--HHHhcCCCCcc-------------------------------------------cccccccc
Confidence            999 999997654433  12211111000                                           00011124


Q ss_pred             hhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       362 ~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      .++.++.+||.+||+.||.+|||+.++++||||+.
T Consensus       267 ~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~  301 (434)
T 2rio_A          267 SLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWP  301 (434)
T ss_dssp             HHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSC
T ss_pred             cchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCC
Confidence            56788999999999999999999999999999975

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=3.6e-45  Score=337.44  Aligned_cols=253  Identities=22%  Similarity=0.307  Sum_probs=202.9

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCC-------eEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQ-------ERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~-------~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      ..++|++.+.||+|+||.||+|.+..++       ..||+|++.... .....+..|+.+++.+.      |+||+++++
T Consensus         6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~   79 (289)
T 4fvq_A            6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLS------HKHLVLNYG   79 (289)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSC------CTTBCCEEE
T ss_pred             chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCC------CCCEeEEEE
Confidence            4568999999999999999999988776       579999986533 34456777888888875      699999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      ++.+.+..++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||++.++..++    
T Consensus        80 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~----  154 (289)
T 4fvq_A           80 VCVCGDENILVQEFVKFGSLDTYLKKNKN-CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKT----  154 (289)
T ss_dssp             EECCTTCCEEEEECCTTCBHHHHHHHTGG-GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGG----
T ss_pred             EEEeCCCCEEEEECCCCCCHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccc----
Confidence            999999999999999 8999999987642 4999999999999999999999999999999999999987654332    


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhC-CCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTG-EALFQT  292 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g-~~Pf~~  292 (399)
                                  .....+||+|||++..... .....||+.|+|||++.+ ..++.++||||||+++|+|++| .+||..
T Consensus       155 ------------~~~~~~kl~Dfg~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~  221 (289)
T 4fvq_A          155 ------------GNPPFIKLSDPGISITVLP-KDILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSA  221 (289)
T ss_dssp             ------------TBCCEEEECCCCSCTTTSC-HHHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             ------------cccceeeeccCcccccccC-ccccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccc
Confidence                        2234599999999865433 234568999999999988 6799999999999999999995 555554


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..... .+......                                                  .+...+.++.+||.
T Consensus       222 ~~~~~~~-~~~~~~~~--------------------------------------------------~~~~~~~~l~~li~  250 (289)
T 4fvq_A          222 LDSQRKL-QFYEDRHQ--------------------------------------------------LPAPKAAELANLIN  250 (289)
T ss_dssp             SCHHHHH-HHHHTTCC--------------------------------------------------CCCCSSCTTHHHHH
T ss_pred             cchHHHH-HHhhccCC--------------------------------------------------CCCCCCHHHHHHHH
Confidence            4433322 22221111                                                  11234566789999


Q ss_pred             HccccCCCCCCCHHHHhCC
Q 015867          373 GLLRYDPSERLTARQALNH  391 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~h  391 (399)
                      +||+.||.+|||+.++++|
T Consensus       251 ~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          251 NCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             HHSCSSGGGSCCHHHHHHH
T ss_pred             HHcCCChhHCcCHHHHHHH
Confidence            9999999999999999874

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-45  Score=348.23  Aligned_cols=250  Identities=19%  Similarity=0.286  Sum_probs=206.2

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ....++|++.+.||+|+||.||+|++.     .+++.||||+++...  .....+..|+.+++.+.      |+||++++
T Consensus        43 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~  116 (343)
T 1luf_A           43 EYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD------NPNIVKLL  116 (343)
T ss_dssp             BCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC------CTTBCCEE
T ss_pred             EecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCEEEEE
Confidence            445678999999999999999999986     455899999997532  23456777888888874      69999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcc
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKY----------------------CPFPVDLVREFGRQLLESVAYMHDLRLI  191 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~----------------------~~~~~~~~~~i~~qi~~~L~~lH~~giv  191 (399)
                      +++.+.+..++||||+ +++|.+++.....                      ..+++..+..++.||+.||.|||++||+
T Consensus       117 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~iv  196 (343)
T 1luf_A          117 GVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV  196 (343)
T ss_dssp             EEECSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence            9999999999999999 8899999987421                      3689999999999999999999999999


Q ss_pred             ccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCC-----CCCcccccCCCccchhhhhCCC
Q 015867          192 HTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-----QNHSSIVSTRHYRAPEVILGLG  266 (399)
Q Consensus       192 H~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~  266 (399)
                      ||||||+|||++                        .++.+||+|||++....     .......||+.|+|||++.+..
T Consensus       197 H~Dlkp~NIl~~------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~  252 (343)
T 1luf_A          197 HRDLATRNCLVG------------------------ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR  252 (343)
T ss_dssp             CSCCSGGGEEEC------------------------GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCC
T ss_pred             cCCCCcceEEEC------------------------CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCC
Confidence            999999999994                        45679999999876422     2223456889999999999999


Q ss_pred             CCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHH
Q 015867          267 WSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA  345 (399)
Q Consensus       267 ~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  345 (399)
                      ++.++||||||+++|+|++ |..||.+.+..+....+......                                     
T Consensus       253 ~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------------  295 (343)
T 1luf_A          253 YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL-------------------------------------  295 (343)
T ss_dssp             CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC-------------------------------------
T ss_pred             cCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHhCCCcC-------------------------------------
Confidence            9999999999999999999 99999887776655554332110                                     


Q ss_pred             HHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                                  ..+..++.++.+||.+||+.||.+|||+.++++
T Consensus       296 ------------~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          296 ------------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             ------------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ------------CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence                        112356778899999999999999999999976

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=6.4e-45  Score=335.56  Aligned_cols=253  Identities=19%  Similarity=0.245  Sum_probs=203.4

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhh--------HHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYR--------DAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~--------~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      ....++|++.+.||+|+||.||+|.+..+++.||||++.......        ..+..|+++++.+.      |+||+++
T Consensus        15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~   88 (287)
T 4f0f_A           15 TLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLN------HPNIVKL   88 (287)
T ss_dssp             BCCSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCC------CTTBCCE
T ss_pred             hhhhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCC------CCCchhh
Confidence            344578999999999999999999999999999999986432211        45666777777764      6999999


Q ss_pred             ceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccC
Q 015867          134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~  210 (399)
                      ++++.+..  ++||||+ +++|.+++..... .+++..+..++.||+.||+|||++|  |+||||||+|||++.++.   
T Consensus        89 ~~~~~~~~--~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~---  162 (287)
T 4f0f_A           89 YGLMHNPP--RMVMEFVPCGDLYHRLLDKAH-PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDE---  162 (287)
T ss_dssp             EEEETTTT--EEEEECCTTCBHHHHHHCTTS-CCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCT---
T ss_pred             heeecCCC--eEEEEecCCCCHHHHHhcccC-CccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCC---
Confidence            99987765  6999999 8999998876543 6999999999999999999999999  999999999999965431   


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhh--CCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVIL--GLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~--~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                                      +....+||+|||++...........||+.|+|||++.  ...++.++|||||||++|+|++|..
T Consensus       163 ----------------~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~  226 (287)
T 4f0f_A          163 ----------------NAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEG  226 (287)
T ss_dssp             ----------------TCSCCEEECCCTTCBCCSSCEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSC
T ss_pred             ----------------CCceeEEeCCCCccccccccccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCC
Confidence                            2334599999999987666667788999999999984  4568899999999999999999999


Q ss_pred             CCCCCCcHHH--HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          289 LFQTHENLEH--LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       289 Pf~~~~~~~~--~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      ||...+....  ...+... .                                               .....+..++.+
T Consensus       227 pf~~~~~~~~~~~~~~~~~-~-----------------------------------------------~~~~~~~~~~~~  258 (287)
T 4f0f_A          227 PFDEYSYGKIKFINMIREE-G-----------------------------------------------LRPTIPEDCPPR  258 (287)
T ss_dssp             TTTTCCCCHHHHHHHHHHS-C-----------------------------------------------CCCCCCTTSCHH
T ss_pred             CCccccccHHHHHHHHhcc-C-----------------------------------------------CCCCCCcccCHH
Confidence            9986554332  2111110 0                                               001122456788


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhC
Q 015867          367 LTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      +.+||.+||+.||.+|||+.|+++
T Consensus       259 l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          259 LRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHhcCChhhCcCHHHHHH
Confidence            999999999999999999999986

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=5.1e-45  Score=333.31  Aligned_cols=252  Identities=24%  Similarity=0.323  Sum_probs=195.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .++|++.+.||+|+||.||+|.+.  ++.||||+++....     ....+..|+++++.+.      |+||+++++++.+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~   77 (271)
T 3dtc_A            6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLK------HPNIIALRGVCLK   77 (271)
T ss_dssp             TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCC------CTTBCCEEEEECC
T ss_pred             hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcC------CCCEeeEEEEEec
Confidence            468999999999999999999864  88899999865322     2355677888888875      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCCCcEEEeecccccCCCCcC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR---LIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g---ivH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      .+..++||||+ +++|.+++...   .+++..+..++.||+.||.|||++|   |+||||||+|||++.....       
T Consensus        78 ~~~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~-------  147 (271)
T 3dtc_A           78 EPNLCLVMEFARGGPLNRVLSGK---RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVEN-------  147 (271)
T ss_dssp             C--CEEEEECCTTEEHHHHHTSS---CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSS-------
T ss_pred             CCceEEEEEcCCCCCHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEeccccc-------
Confidence            99999999999 89999998643   5999999999999999999999999   8999999999999643200       


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                               ....++.++|+|||++..... ......||+.|+|||++.+..++.++||||||+++|+|++|..||.+.+
T Consensus       148 ---------~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~  218 (271)
T 3dtc_A          148 ---------GDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID  218 (271)
T ss_dssp             ---------SCCSSCCEEECCCCC-------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSC
T ss_pred             ---------ccccCcceEEccCCcccccccccccCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence                     001367899999999875433 2345679999999999999999999999999999999999999998877


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      .......+......                                                ...+..++..+.+||.+|
T Consensus       219 ~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~~~  250 (271)
T 3dtc_A          219 GLAVAYGVAMNKLA------------------------------------------------LPIPSTCPEPFAKLMEDC  250 (271)
T ss_dssp             HHHHHHHHHTSCCC------------------------------------------------CCCCTTCCHHHHHHHHHH
T ss_pred             HHHHHHhhhcCCCC------------------------------------------------CCCCcccCHHHHHHHHHH
Confidence            65554433221110                                                111235678899999999


Q ss_pred             cccCCCCCCCHHHHhCC
Q 015867          375 LRYDPSERLTARQALNH  391 (399)
Q Consensus       375 L~~dP~~R~t~~ell~h  391 (399)
                      |+.||.+|||+.|+++|
T Consensus       251 l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          251 WNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             TCSSGGGSCCHHHHHHH
T ss_pred             hcCCcccCcCHHHHHHH
Confidence            99999999999999874

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=1.5e-45  Score=353.24  Aligned_cols=246  Identities=20%  Similarity=0.319  Sum_probs=204.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++...  .....+..|+++++.+.      ||||+++++++...+.
T Consensus       113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~~~~  186 (377)
T 3cbl_A          113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYS------HPNIVRLIGVCTQKQP  186 (377)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCC------CTTBCCEEEEECSSSS
T ss_pred             hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCC------CCCEEEEEEEEecCCC
Confidence            468999999999999999999999899999999986532  23345677888887764      6999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .|+||||+ +++|.+++...+. .+++..+..++.||+.||+|||++||+||||||+|||+                   
T Consensus       187 ~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~-------------------  246 (377)
T 3cbl_A          187 IYIVMELVQGGDFLTFLRTEGA-RLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLV-------------------  246 (377)
T ss_dssp             CEEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE-------------------
T ss_pred             cEEEEEcCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEE-------------------
Confidence            99999999 8999999986542 58999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCc
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHEN  295 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~  295 (399)
                           +.++.+||+|||++.......     ....+++.|+|||++.+..++.++|||||||++|||++ |..||.+.+.
T Consensus       247 -----~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~  321 (377)
T 3cbl_A          247 -----TEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN  321 (377)
T ss_dssp             -----CTTCCEEECCGGGCEECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH
T ss_pred             -----cCCCcEEECcCCCceecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence                 446789999999987543321     12235778999999999899999999999999999998 9999988776


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+....+.....                       .                          ..+..++.++.+||.+||
T Consensus       322 ~~~~~~~~~~~~-----------------------~--------------------------~~~~~~~~~l~~li~~cl  352 (377)
T 3cbl_A          322 QQTREFVEKGGR-----------------------L--------------------------PCPELCPDAVFRLMEQCW  352 (377)
T ss_dssp             HHHHHHHHTTCC-----------------------C--------------------------CCCTTCCHHHHHHHHHHT
T ss_pred             HHHHHHHHcCCC-----------------------C--------------------------CCCCCCCHHHHHHHHHHc
Confidence            655544432110                       0                          112346778899999999


Q ss_pred             ccCCCCCCCHHHHhC
Q 015867          376 RYDPSERLTARQALN  390 (399)
Q Consensus       376 ~~dP~~R~t~~ell~  390 (399)
                      +.||.+|||+.++++
T Consensus       353 ~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          353 AYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             CSSGGGSCCHHHHHH
T ss_pred             CCCchhCcCHHHHHH
Confidence            999999999999875

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=8.2e-45  Score=331.10  Aligned_cols=245  Identities=23%  Similarity=0.359  Sum_probs=206.8

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.+.||+|+||.||+|.+. +++.||+|++.........+..|+++++.+.      |+||+++++++.+.+..++
T Consensus         8 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~~~~~~~~l   80 (267)
T 3t9t_A            8 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLS------HPKLVQLYGVCLEQAPICL   80 (267)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBCHHHHHHHHHHHHTCC------CTTBCCEEEEECSSSSCEE
T ss_pred             hheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCCHHHHHHHHHHHHhCC------CCCEeeEEEEEccCCCeEE
Confidence            57999999999999999999875 6778999999876555667888888888874      6999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+|+||||+||+++                     
T Consensus        81 v~e~~~~~~L~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~---------------------  138 (267)
T 3t9t_A           81 VTEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---------------------  138 (267)
T ss_dssp             EECCCTTCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---------------------
T ss_pred             EEeCCCCCcHHHHHhhCcc-cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC---------------------
Confidence            99999 8999999987543 589999999999999999999999999999999999994                     


Q ss_pred             cCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                         .++.++|+|||++......    .....||..|+|||++.+..++.++||||||+++|+|++ |..||...+..+..
T Consensus       139 ---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~  215 (267)
T 3t9t_A          139 ---ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV  215 (267)
T ss_dssp             ---GGGCEEECCTTGGGGBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHH
T ss_pred             ---CCCCEEEcccccccccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHH
Confidence               4567999999998754322    223457788999999999999999999999999999999 99999887766655


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......                                                 ..+..++..+.+||.+||+.||
T Consensus       216 ~~i~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~~l~~~p  246 (267)
T 3t9t_A          216 EDISTGFRL-------------------------------------------------YKPRLASTHVYQIMNHCWRERP  246 (267)
T ss_dssp             HHHHTTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHhcCCcC-------------------------------------------------CCCccCcHHHHHHHHHHccCCh
Confidence            554332110                                                 1113456788999999999999


Q ss_pred             CCCCCHHHHhCC
Q 015867          380 SERLTARQALNH  391 (399)
Q Consensus       380 ~~R~t~~ell~h  391 (399)
                      .+|||+.+++++
T Consensus       247 ~~Rps~~~ll~~  258 (267)
T 3t9t_A          247 EDRPAFSRLLRQ  258 (267)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCcCHHHHHHH
Confidence            999999999863

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.3e-45  Score=345.05  Aligned_cols=257  Identities=18%  Similarity=0.251  Sum_probs=206.5

Q ss_pred             CccCCCEEEEeeeccccceEEEEEE-----EccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECW-----DRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~-----~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      +...++|++.+.||+|+||.||+|.     +..+++.||||++...  ......+..|+.+++.+.      |+||++++
T Consensus        26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~   99 (327)
T 2yfx_A           26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFN------HQNIVRCI   99 (327)
T ss_dssp             BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCC------CTTBCCEE
T ss_pred             cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCC------CCCCCeEE
Confidence            4456789999999999999999998     4567889999998642  233455677888888774      69999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCC-----CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKY-----CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~-----~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      +++...+..|+||||+ +++|.+++.....     ..+++..+..++.||+.||.|||++||+||||||+|||++.++  
T Consensus       100 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~--  177 (327)
T 2yfx_A          100 GVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPG--  177 (327)
T ss_dssp             EEECSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSS--
T ss_pred             EEEcCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCC--
Confidence            9999999999999999 9999999987542     2489999999999999999999999999999999999996432  


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCC-----CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHH
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-----QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  283 (399)
                                         .+..++|+|||++....     .......||+.|+|||++.+..++.++||||||+++|+|
T Consensus       178 -------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el  238 (327)
T 2yfx_A          178 -------------------PGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEI  238 (327)
T ss_dssp             -------------------TTCCEEECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             -------------------CcceEEECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHH
Confidence                               35679999999875421     122345689999999999999999999999999999999


Q ss_pred             Hh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh
Q 015867          284 CT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR  362 (399)
Q Consensus       284 l~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (399)
                      ++ |..||...+..+....+......                                                 ..+..
T Consensus       239 lt~g~~p~~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~  269 (327)
T 2yfx_A          239 FSLGYMPYPSKSNQEVLEFVTSGGRM-------------------------------------------------DPPKN  269 (327)
T ss_dssp             HTTSCCSSTTCCHHHHHHHHHTTCCC-------------------------------------------------CCCTT
T ss_pred             HcCCCCCCCCcCHHHHHHHHhcCCCC-------------------------------------------------CCCCC
Confidence            98 99999887766555444332110                                                 11235


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhCCccc
Q 015867          363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       363 ~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      ++..+.+||.+||+.||.+|||+.++++|.|+
T Consensus       270 ~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~  301 (327)
T 2yfx_A          270 CPGPVYRIMTQCWQHQPEDRPNFAIILERIEY  301 (327)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHH
Confidence            67788999999999999999999999998775

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=7.9e-45  Score=355.98  Aligned_cols=244  Identities=23%  Similarity=0.338  Sum_probs=203.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC-CeE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-NHI  143 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-~~~  143 (399)
                      .++|++.+.||+|+||.||+|.+.  ++.||||+++... ....+..|+.+++.+.      |+||+++++++... +..
T Consensus       192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~-~~~~~~~E~~~l~~l~------h~niv~~~~~~~~~~~~~  262 (450)
T 1k9a_A          192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA-TAQAFLAEASVMTQLR------HSNLVQLLGVIVEEKGGL  262 (450)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT-TSHHHHHHHHHHHTCC------CTTBCCEEEEEECTTSCE
T ss_pred             hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch-HHHHHHHHHHHHHhcc------CCCEEEEEEEEEcCCCce
Confidence            468999999999999999999764  7799999997643 4567888999998875      59999999987665 489


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||||+ +++|.+++...+...+++..+..++.||+.||+|||++||+||||||+|||+                    
T Consensus       263 ~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill--------------------  322 (450)
T 1k9a_A          263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--------------------  322 (450)
T ss_dssp             EEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE--------------------
T ss_pred             EEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEE--------------------
Confidence            9999999 8999999998765558999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM  301 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~  301 (399)
                          +.++.+||+|||++...........++..|+|||++.+..++.++|||||||++|||++ |..||...+..+....
T Consensus       323 ----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~  398 (450)
T 1k9a_A          323 ----SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR  398 (450)
T ss_dssp             ----CTTSCEEECCCTTCEECC------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHH
T ss_pred             ----CCCCCEEEeeCCCcccccccccCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence                45678999999998765554445578899999999999999999999999999999998 9999987766555544


Q ss_pred             HHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCC
Q 015867          302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE  381 (399)
Q Consensus       302 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  381 (399)
                      +.....                                                 ...+..++.++.+||.+||+.||.+
T Consensus       399 i~~~~~-------------------------------------------------~~~p~~~~~~l~~li~~cl~~dp~~  429 (450)
T 1k9a_A          399 VEKGYK-------------------------------------------------MDAPDGCPPAVYDVMKNCWHLDAAT  429 (450)
T ss_dssp             HHTTCC-------------------------------------------------CCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HHcCCC-------------------------------------------------CCCCCcCCHHHHHHHHHHcCCChhH
Confidence            432210                                                 0122456788999999999999999


Q ss_pred             CCCHHHHhC
Q 015867          382 RLTARQALN  390 (399)
Q Consensus       382 R~t~~ell~  390 (399)
                      |||+.++++
T Consensus       430 Rpt~~~l~~  438 (450)
T 1k9a_A          430 RPTFLQLRE  438 (450)
T ss_dssp             SCCHHHHHH
T ss_pred             CcCHHHHHH
Confidence            999999875

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=1.2e-45  Score=346.96  Aligned_cols=259  Identities=24%  Similarity=0.371  Sum_probs=182.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .++|++.+.||+|+||.||+|.+..+++.||||+++....  .......|...+     .....|+||+++++++...+.
T Consensus        21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~-----~~~~~h~niv~~~~~~~~~~~   95 (327)
T 3aln_A           21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVV-----MRSSDCPYIVQFYGALFREGD   95 (327)
T ss_dssp             SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHH-----HSSCCCTTBCCEEEEEECSSE
T ss_pred             HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHH-----HHcCCCCcEeeeeeEEEeCCc
Confidence            4689999999999999999999999999999999975422  222233333321     223468999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHh---cCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKR---NKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~---~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .++||||+.++|.+++..   .....+++..+..++.|++.||.|||+. ||+||||||+|||++               
T Consensus        96 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~---------------  160 (327)
T 3aln_A           96 CWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLD---------------  160 (327)
T ss_dssp             EEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEE---------------
T ss_pred             eEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEc---------------
Confidence            999999997798888763   2233699999999999999999999999 999999999999994               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhh----hCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVI----LGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~----~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                               .++.+||+|||++......  .....||+.|+|||++    .+..++.++||||||+++|+|++|..||..
T Consensus       161 ---------~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~  231 (327)
T 3aln_A          161 ---------RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPK  231 (327)
T ss_dssp             ---------TTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSC
T ss_pred             ---------CCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence                     4667999999998764332  2344799999999999    456789999999999999999999999976


Q ss_pred             CCcH-HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          293 HENL-EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       293 ~~~~-~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      .... +....+                       .......++                      ......++..+.+||
T Consensus       232 ~~~~~~~~~~~-----------------------~~~~~~~~~----------------------~~~~~~~~~~l~~li  266 (327)
T 3aln_A          232 WNSVFDQLTQV-----------------------VKGDPPQLS----------------------NSEEREFSPSFINFV  266 (327)
T ss_dssp             C-------CCC-----------------------CCSCCCCCC----------------------CCSSCCCCHHHHHHH
T ss_pred             cchHHHHHHHH-----------------------hcCCCCCCC----------------------CcccccCCHHHHHHH
Confidence            4321 110000                       000000010                      111235678899999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccCC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .+||+.||.+|||+.++++||||.+.
T Consensus       267 ~~~l~~dp~~Rps~~ell~hp~~~~~  292 (327)
T 3aln_A          267 NLCLTKDESKRPKYKELLKHPFILMY  292 (327)
T ss_dssp             HHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHhhCChhhCcCHHHHHhChHHHHh
Confidence            99999999999999999999999753

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=100.00  E-value=7.6e-46  Score=357.52  Aligned_cols=279  Identities=21%  Similarity=0.307  Sum_probs=210.1

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      +..+.++|++.+.||+|+||.||+|.+..+++.||||++....  .....+..|+++++.+.      |+||+++++++.
T Consensus         4 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------hpnIv~~~~~~~   77 (396)
T 4eut_A            4 QSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN------HKNIVKLFAIEE   77 (396)
T ss_dssp             EECSSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCC------CTTBCCEEEEEE
T ss_pred             CCCCCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcC------CCCCCeEEEeec
Confidence            3456778999999999999999999999999999999997533  23355677888988885      599999999987


Q ss_pred             cCC--eEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          139 YRN--HICIVFEKL-GPSLFDFLKRNKY-CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       139 ~~~--~~~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      ..+  ..++||||+ +++|.+++..... ..+++..++.++.||+.||+|||++||+||||||+|||+..+.        
T Consensus        78 ~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~--------  149 (396)
T 4eut_A           78 ETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE--------  149 (396)
T ss_dssp             CTTTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECT--------
T ss_pred             cCCCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecC--------
Confidence            654  789999999 8999999976432 2399999999999999999999999999999999999984332        


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhC--------CCCCCcchhHHHHHHHHHHH
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILG--------LGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~--------~~~~~~~DiwslG~il~ell  284 (399)
                                  +.++.+||+|||++......  .....||+.|+|||++.+        ..++.++|||||||++|+|+
T Consensus       150 ------------~~~~~~kL~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~  217 (396)
T 4eut_A          150 ------------DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAA  217 (396)
T ss_dssp             ------------TSCEEEEECCGGGCEECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             ------------CCceeEEEecCCCceEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHH
Confidence                        34667999999998764332  345679999999999875        46788999999999999999


Q ss_pred             hCCCCCCCC----CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccc
Q 015867          285 TGEALFQTH----ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV  360 (399)
Q Consensus       285 ~g~~Pf~~~----~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (399)
                      +|..||...    ...+....+..   ..|...+......      ......|....                .......
T Consensus       218 tg~~Pf~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~------~~~~~~~~~~~----------------~~~~~l~  272 (396)
T 4eut_A          218 TGSLPFRPFEGPRRNKEVMYKIIT---GKPSGAISGVQKA------ENGPIDWSGDM----------------PVSCSLS  272 (396)
T ss_dssp             HSSCSEECTTCTTTCHHHHHHHHH---SCCTTCCEEEECS------TTCCEEEESSC----------------CTTCSSC
T ss_pred             HCCCCCCCCCcccchHHHHHHHhc---CCCcccchhheec------cCCCcccCccC----------------Ccccccc
Confidence            999999642    23344443333   2222111111100      01111121100                0001222


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          361 DRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       361 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ..++..+.+||.+||+.||.+|||+.|+++
T Consensus       273 ~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          273 RGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             HHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             hHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence            567788999999999999999999999754

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=9.9e-45  Score=359.24  Aligned_cols=248  Identities=18%  Similarity=0.295  Sum_probs=211.5

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      -..+|++.+.||+|+||.||+|.+..++..||||+++........+..|+.+++.+.      |+||+++++++...+.+
T Consensus       218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------hpniv~l~~~~~~~~~~  291 (495)
T 1opk_A          218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNLVQLLGVCTREPPF  291 (495)
T ss_dssp             CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSSCHHHHHHHHHHHHHCC------CTTBCCEEEEECSSSSC
T ss_pred             CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcccchHHHHHHHHHHHhcC------CCCEeeEEEEEecCCcE
Confidence            356799999999999999999999989999999999866555677888999999885      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++                   
T Consensus       292 ~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~-------------------  352 (495)
T 1opk_A          292 YIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVG-------------------  352 (495)
T ss_dssp             EEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC-------------------
T ss_pred             EEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEC-------------------
Confidence            9999999 89999999886655799999999999999999999999999999999999994                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  297 (399)
                           .++.+||+|||++.......    ....++..|+|||++.+..++.++|||||||++|||++ |..||.+.+..+
T Consensus       353 -----~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~  427 (495)
T 1opk_A          353 -----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ  427 (495)
T ss_dssp             -----GGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG
T ss_pred             -----CCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHH
Confidence                 46679999999987643322    23346778999999999999999999999999999999 999998877655


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+.....                                                 ...+..++.++.+||.+||+.
T Consensus       428 ~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~li~~cl~~  458 (495)
T 1opk_A          428 VYELLEKDYR-------------------------------------------------MERPEGCPEKVYELMRACWQW  458 (495)
T ss_dssp             HHHHHHTTCC-------------------------------------------------CCCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHHcCCC-------------------------------------------------CCCCCCCCHHHHHHHHHHcCc
Confidence            5444322110                                                 012245678899999999999


Q ss_pred             CCCCCCCHHHHhC
Q 015867          378 DPSERLTARQALN  390 (399)
Q Consensus       378 dP~~R~t~~ell~  390 (399)
                      ||.+|||+.+|++
T Consensus       459 dP~~RPs~~el~~  471 (495)
T 1opk_A          459 NPSDRPSFAEIHQ  471 (495)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhHCcCHHHHHH
Confidence            9999999999875

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=1.3e-44  Score=337.45  Aligned_cols=250  Identities=24%  Similarity=0.345  Sum_probs=206.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEE-----ccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWD-----RQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|++.+.||+|+||.||+|.+     ..+++.||||+++...  .....+..|+.+++.+.     .||||+++++++
T Consensus        22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~i~~~~~~~   96 (313)
T 1t46_A           22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NHMNIVNLLGAC   96 (313)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcc-----cCCCeeeEEEEE
Confidence            46899999999999999999984     4578899999997532  33466778999999883     369999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYC----------------PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~----------------~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      ...+..++||||+ +++|.+++......                .+++..+..++.||+.||.|||++||+||||||+||
T Consensus        97 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Ni  176 (313)
T 1t46_A           97 TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI  176 (313)
T ss_dssp             CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ecCCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceE
Confidence            9999999999999 88999999876432                489999999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWS  275 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Diws  275 (399)
                      |++                        .++.+||+|||++.......     ....||+.|+|||++.+..++.++||||
T Consensus       177 l~~------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  232 (313)
T 1t46_A          177 LLT------------------------HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWS  232 (313)
T ss_dssp             EEE------------------------TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             EEc------------------------CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHH
Confidence            994                        46679999999987644332     2345788999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          276 VGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       276 lG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      ||+++|+|++ |..||.+.........+......                                              
T Consensus       233 lG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------------------------------------------  266 (313)
T 1t46_A          233 YGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR----------------------------------------------  266 (313)
T ss_dssp             HHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCC----------------------------------------------
T ss_pred             HHHHHHHHHhCCCCCCCcccchhHHHHHhccCCC----------------------------------------------
Confidence            9999999999 99999876654444333222111                                              


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                        ...+..++.++.+||.+||+.||.+|||+.|++++
T Consensus       267 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          267 --MLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --CCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence              01123567788999999999999999999999874

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=2e-45  Score=344.86  Aligned_cols=262  Identities=21%  Similarity=0.204  Sum_probs=193.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC----
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN----  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~----  141 (399)
                      ++|++.+.||+|+||.||+|++.  ++.||||++............|+.+++.+      .||||+++++++....    
T Consensus        24 ~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~~~~~~~~~E~~~l~~l------~hpniv~~~~~~~~~~~~~~   95 (322)
T 3soc_A           24 MPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQDKQSWQNEYEVYSLPGM------KHENILQFIGAEKRGTSVDV   95 (322)
T ss_dssp             EEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGGHHHHHHHHHHHTSTTC------CCTTBCCEEEEEEEECSSSE
T ss_pred             hhchhhheecccCceEEEEEEEC--CCEEEEEEeecCchHHHHHHHHHHHHhcC------CCCCchhhcceeccCCCCCc
Confidence            47999999999999999999764  78999999976544444444455555444      5799999999988743    


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC----------CccccCCCCCcEEEeecccccC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL----------RLIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~----------givH~Dikp~NIll~~~~~~~~  210 (399)
                      .+++||||+ +++|.+++....   +++..+..++.||+.||+|||+.          ||+||||||+|||+        
T Consensus        96 ~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill--------  164 (322)
T 3soc_A           96 DLWLITAFHEKGSLSDFLKANV---VSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL--------  164 (322)
T ss_dssp             EEEEEEECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEE--------
T ss_pred             eEEEEEecCCCCCHHHHHHhcC---CCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEE--------
Confidence            479999999 889999998754   99999999999999999999999          99999999999999        


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCC-----CCCCcchhHHHHHHH
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCIL  280 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~-----~~~~~~DiwslG~il  280 (399)
                                      +.++.+||+|||++.....     ......||+.|+|||++.+.     .++.++|||||||++
T Consensus       165 ----------------~~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il  228 (322)
T 3soc_A          165 ----------------KNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVL  228 (322)
T ss_dssp             ----------------CTTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred             ----------------CCCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHH
Confidence                            4567899999999865322     22346799999999999873     456788999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHH-HHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhcc
Q 015867          281 VELCTGEALFQTHENLEHLAMMERALGPLPEH-MIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH  359 (399)
Q Consensus       281 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~-~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  359 (399)
                      |+|++|+.||.+................+... +.......       ......+                     ....
T Consensus       229 ~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~---------------------~~~~  280 (322)
T 3soc_A          229 WELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHK-------KKRPVLR---------------------DYWQ  280 (322)
T ss_dssp             HHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTS-------CCCCCCC---------------------GGGG
T ss_pred             HHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcc-------cCCCCcc---------------------cccc
Confidence            99999999997654321111111111111111 11100000       0000000                     0001


Q ss_pred             chhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          360 VDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       360 ~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ....+.++.+||.+||+.||.+|||+.|+++
T Consensus       281 ~~~~~~~l~~li~~cl~~dP~~Rps~~ell~  311 (322)
T 3soc_A          281 KHAGMAMLCETIEECWDHDAEARLSAGCVGE  311 (322)
T ss_dssp             SSHHHHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccchHHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            1244567899999999999999999999986

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=100.00  E-value=5.7e-45  Score=345.02  Aligned_cols=260  Identities=17%  Similarity=0.226  Sum_probs=195.1

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEcc---CCeEEEEEEEecchhhhHHHHHHHHHHHHh---------hhcCCCCCcce
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQ---TQERVAIKVVRSIRKYRDAAMIEIDVLQHL---------AKNDKGGSSHC  130 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l---------~~~~~~~~~~i  130 (399)
                      ...++|++.+.||+|+||.||+|.+..   ++..||||++.....   ....|..+++.+         .......|+||
T Consensus        34 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~---~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni  110 (345)
T 2v62_A           34 MEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENG---PLFSELKFYQRVAKKDCIKKWIERKQLDYLGI  110 (345)
T ss_dssp             TTSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-C---HHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCC
T ss_pred             ccCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCc---chHHHHHHHHHHhhhHHHHHHHhhccccccCc
Confidence            345689999999999999999999887   788999999875321   122233332222         22333467999


Q ss_pred             eeeceeecc----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          131 VQIRNWFDY----RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       131 v~~~~~~~~----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                      +++++++..    ....|+||||++++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++.++
T Consensus       111 ~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~  188 (345)
T 2v62_A          111 PLFYGSGLTEFKGRSYRFMVMERLGIDLQKISGQNG--TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKN  188 (345)
T ss_dssp             CCEEEEEEEESSSCEEEEEEEECEEEEHHHHCBGGG--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSS
T ss_pred             ceeecccccccCCCcEEEEEEeccCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCC
Confidence            999999887    77999999999999999998766  699999999999999999999999999999999999996432


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC----------CCcccccCCCccchhhhhCCCCCCcchhHHH
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ----------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSV  276 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  276 (399)
                                            .+.+||+|||++.....          ......||+.|+|||++.+..++.++|||||
T Consensus       189 ----------------------~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl  246 (345)
T 2v62_A          189 ----------------------PDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEIL  246 (345)
T ss_dssp             ----------------------TTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHH
T ss_pred             ----------------------CCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHH
Confidence                                  34899999999864321          1145579999999999999999999999999


Q ss_pred             HHHHHHHHhCCCCCCCC--CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          277 GCILVELCTGEALFQTH--ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       277 G~il~ell~g~~Pf~~~--~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      ||++|+|++|..||...  +..............+|..+....                                     
T Consensus       247 G~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------------------  289 (345)
T 2v62_A          247 GYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWA-------------------------------------  289 (345)
T ss_dssp             HHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHS-------------------------------------
T ss_pred             HHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhc-------------------------------------
Confidence            99999999999999652  222233323333333333221110                                     


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                          ....++.++.+||.+||..||.+|||++++++
T Consensus       290 ----~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          290 ----PSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             ----CTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             ----cccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence                01256788999999999999999999999876

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=3.9e-45  Score=342.61  Aligned_cols=252  Identities=21%  Similarity=0.320  Sum_probs=205.2

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      .+...++|++.+.||+|+||.||+|.+.     .+++.||||++....  .....+..|+.+++.+      .|+||+++
T Consensus        20 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------~h~~i~~~   93 (322)
T 1p4o_A           20 WEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF------NCHHVVRL   93 (322)
T ss_dssp             TBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC------CCTTBCCE
T ss_pred             hcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhc------CCCCEeee
Confidence            3455678999999999999999999876     467889999986532  2233456677777666      46999999


Q ss_pred             ceeeccCCeEEEEEccC-CCCHHHHHHhcC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEee
Q 015867          134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNK--------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVS  204 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~  204 (399)
                      ++++.+.+..++||||+ +++|.+++...+        ...+++..+..++.||+.||+|||++||+||||||+|||+  
T Consensus        94 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli--  171 (322)
T 1p4o_A           94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV--  171 (322)
T ss_dssp             EEEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE--
T ss_pred             EEEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEE--
Confidence            99999999999999999 889999997532        1257999999999999999999999999999999999999  


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHH
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCI  279 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~i  279 (399)
                                            +.++.+||+|||++......     .....||+.|+|||++.+..++.++||||||++
T Consensus       172 ----------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i  229 (322)
T 1p4o_A          172 ----------------------AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV  229 (322)
T ss_dssp             ----------------------CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred             ----------------------cCCCeEEECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHH
Confidence                                  44678999999998653222     123457889999999999999999999999999


Q ss_pred             HHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          280 LVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       280 l~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      +|+|++ |..||.+.+..+....+.....                                                 ..
T Consensus       230 l~el~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~~  260 (322)
T 1p4o_A          230 LWEIATLAEQPYQGLSNEQVLRFVMEGGL-------------------------------------------------LD  260 (322)
T ss_dssp             HHHHHHTSCCTTTTSCHHHHHHHHHTTCC-------------------------------------------------CC
T ss_pred             HHHHHhcCCCccccCCHHHHHHHHHcCCc-------------------------------------------------CC
Confidence            999999 8999988776655544432110                                                 01


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      .+..++..+.+||.+||+.||.+|||+.|+++|
T Consensus       261 ~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          261 KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            123567788999999999999999999999886

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=6.4e-45  Score=334.66  Aligned_cols=249  Identities=24%  Similarity=0.331  Sum_probs=194.0

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccC---CeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQT---QERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      +...++|++.+.||+|+||.||+|.+..+   +..||+|++...  ......+..|+.+++.+.      ||||++++++
T Consensus        11 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~   84 (281)
T 1mp8_A           11 EIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD------HPHIVKLIGV   84 (281)
T ss_dssp             BCCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCC------CTTBCCEEEE
T ss_pred             EEehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCccceEEEE
Confidence            44567899999999999999999998653   567999998642  223455667888777764      6999999998


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +. ++..++||||+ +++|.+++...+. .+++..+..++.||+.||.|||++||+||||||+|||++.           
T Consensus        85 ~~-~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~-----------  151 (281)
T 1mp8_A           85 IT-ENPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS-----------  151 (281)
T ss_dssp             EC-SSSCEEEEECCTTEEHHHHHHHTTT-TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE-----------
T ss_pred             Ec-cCccEEEEecCCCCCHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECC-----------
Confidence            84 56789999999 8899999986543 5999999999999999999999999999999999999954           


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALF  290 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf  290 (399)
                                   ++.+||+|||++......    .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||
T Consensus       152 -------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf  218 (281)
T 1mp8_A          152 -------------NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF  218 (281)
T ss_dssp             -------------TTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             -------------CCCEEECccccccccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCC
Confidence                         567999999998764332    123456789999999999999999999999999999997 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .+.+..+....+.....                                                 ...++.++.++.+|
T Consensus       219 ~~~~~~~~~~~i~~~~~-------------------------------------------------~~~~~~~~~~l~~l  249 (281)
T 1mp8_A          219 QGVKNNDVIGRIENGER-------------------------------------------------LPMPPNCPPTLYSL  249 (281)
T ss_dssp             TTCCGGGHHHHHHTTCC-------------------------------------------------CCCCTTCCHHHHHH
T ss_pred             CcCCHHHHHHHHHcCCC-------------------------------------------------CCCCCCCCHHHHHH
Confidence            88776655554432110                                                 01124567889999


Q ss_pred             HHHccccCCCCCCCHHHHhCC
Q 015867          371 LHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~h  391 (399)
                      |.+||+.||.+|||+.|++++
T Consensus       250 i~~~l~~~p~~Rps~~~l~~~  270 (281)
T 1mp8_A          250 MTKCWAYDPSRRPRFTELKAQ  270 (281)
T ss_dssp             HHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHccCChhhCcCHHHHHHH
Confidence            999999999999999999863

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=5.9e-45  Score=339.95  Aligned_cols=249  Identities=19%  Similarity=0.314  Sum_probs=203.6

Q ss_pred             cCCCEEEEeeeccccceEEEEEEE-----ccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWD-----RQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      ..++|++.+.||+|+||.||+|.+     ..+++.||||++....  .....+..|+++++.+      .||||++++++
T Consensus        21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~~~~~   94 (314)
T 2ivs_A           21 PRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQV------NHPHVIKLYGA   94 (314)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTC------CCTTBCCEEEE
T ss_pred             chhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhC------CCCceeeEEEE
Confidence            356899999999999999999987     3456899999986532  2334566677777666      46999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCcccc
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKY----------------------CPFPVDLVREFGRQLLESVAYMHDLRLIHT  193 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~----------------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~  193 (399)
                      +.+.+..++||||+ +++|.+++.....                      ..+++..+..++.||+.||+|||++||+||
T Consensus        95 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~  174 (314)
T 2ivs_A           95 CSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHR  174 (314)
T ss_dssp             ECSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECC
T ss_pred             EecCCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence            99999999999999 8999999987542                      248999999999999999999999999999


Q ss_pred             CCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCC
Q 015867          194 DLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWS  268 (399)
Q Consensus       194 Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~  268 (399)
                      ||||+|||++                        .++.+||+|||++......     .....+|+.|+|||++.+..++
T Consensus       175 dikp~NIli~------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~  230 (314)
T 2ivs_A          175 DLAARNILVA------------------------EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYT  230 (314)
T ss_dssp             CCSGGGEEEE------------------------TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEEC
T ss_pred             ccchheEEEc------------------------CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcC
Confidence            9999999994                        4567999999998754332     2234578889999999999999


Q ss_pred             CcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHH
Q 015867          269 YPCDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK  347 (399)
Q Consensus       269 ~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~  347 (399)
                      .++||||||+++|+|++ |..||.+.+..+....+.....                                        
T Consensus       231 ~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~----------------------------------------  270 (314)
T 2ivs_A          231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHR----------------------------------------  270 (314)
T ss_dssp             HHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC----------------------------------------
T ss_pred             chhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCc----------------------------------------
Confidence            99999999999999999 9999987766544433322110                                        


Q ss_pred             hhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       348 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                               ...+..++.++.+||.+||+.||.+|||+.+++++
T Consensus       271 ---------~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          271 ---------MERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             ---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---------CCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence                     01123567889999999999999999999999874

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=6.9e-45  Score=341.93  Aligned_cols=246  Identities=20%  Similarity=0.289  Sum_probs=194.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEE----EEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERV----AIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~v----aiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      .++|++.+.||+|+||+||+|++..+++.+    |+|.++...  .....+..|+.+++.+.      |+||+++++++.
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~   87 (327)
T 3poz_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD------NPHVCRLLGICL   87 (327)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCC------BTTBCCEEEEEE
T ss_pred             HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCC------CCCEeEEEEEEe
Confidence            457999999999999999999988777654    777764322  33456778999998885      599999999998


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      ... .++|++|+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.             
T Consensus        88 ~~~-~~~v~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~-------------  152 (327)
T 3poz_A           88 TST-VQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT-------------  152 (327)
T ss_dssp             SSS-EEEEEECCTTCBHHHHHHHSTT-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE-------------
T ss_pred             cCC-eEEEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECC-------------
Confidence            755 77888888 9999999987543 6999999999999999999999999999999999999954             


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                                 ++.+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus       153 -----------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~  221 (327)
T 3poz_A          153 -----------PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD  221 (327)
T ss_dssp             -----------TTEEEECCTTHHHHHTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             -----------CCCEEEccCcceeEccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCcc
Confidence                       567999999988653222     123456889999999999999999999999999999999 999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+....+.....                                                 ...++.++.++.+||
T Consensus       222 ~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~li  252 (327)
T 3poz_A          222 GIPASEISSILEKGER-------------------------------------------------LPQPPICTIDVYMIM  252 (327)
T ss_dssp             TCCGGGHHHHHHTTCC-------------------------------------------------CCCCTTBCHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCC-------------------------------------------------CCCCccCCHHHHHHH
Confidence            8766554443322110                                                 011235677889999


Q ss_pred             HHccccCCCCCCCHHHHhCC
Q 015867          372 HGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~h  391 (399)
                      .+||+.||.+|||+.+++++
T Consensus       253 ~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          253 VKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             HHHTCSCGGGSCCHHHHHHH
T ss_pred             HHHcCCChhhCCCHHHHHHH
Confidence            99999999999999999864

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=2.1e-44  Score=353.51  Aligned_cols=247  Identities=26%  Similarity=0.377  Sum_probs=206.9

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ...++|++.+.||+|+||.||+|.+. ++..||||+++........+..|+.+++.+.      ||||+++++++. .+.
T Consensus       185 i~~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~l~~~~~-~~~  256 (454)
T 1qcf_A          185 IPRESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSMSVEAFLAEANVMKTLQ------HDKLVKLHAVVT-KEP  256 (454)
T ss_dssp             CCGGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSBCHHHHHHHHHHHTTCC------CTTBCCEEEEEC-SSS
T ss_pred             echHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCccHHHHHHHHHHHhhCC------CCCEeeEEEEEe-CCc
Confidence            34568999999999999999999875 4678999999865555677888888888774      699999999886 667


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||+                   
T Consensus       257 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill-------------------  317 (454)
T 1qcf_A          257 IYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV-------------------  317 (454)
T ss_dssp             CEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEE-------------------
T ss_pred             cEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEE-------------------
Confidence            89999999 9999999986543358999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENL  296 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~  296 (399)
                           +.++.+||+|||++......    .....+|..|+|||++.+..++.++|||||||++|||++ |..||.+.+..
T Consensus       318 -----~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~  392 (454)
T 1qcf_A          318 -----SASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP  392 (454)
T ss_dssp             -----CTTCCEEECSTTGGGGBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH
T ss_pred             -----CCCCcEEEeeCCCceEcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH
Confidence                 45678999999998764332    123346788999999999999999999999999999999 99999988877


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....+......                                                 ..+..++.++.+||.+||+
T Consensus       393 ~~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~cl~  423 (454)
T 1qcf_A          393 EVIRALERGYRM-------------------------------------------------PRPENCPEELYNIMMRCWK  423 (454)
T ss_dssp             HHHHHHHHTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHcc
Confidence            766665443111                                                 1123567889999999999


Q ss_pred             cCCCCCCCHHHHhC
Q 015867          377 YDPSERLTARQALN  390 (399)
Q Consensus       377 ~dP~~R~t~~ell~  390 (399)
                      .||.+|||+.+|++
T Consensus       424 ~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          424 NRPEERPTFEYIQS  437 (454)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhHCcCHHHHHH
Confidence            99999999999865

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=4.7e-45  Score=342.76  Aligned_cols=246  Identities=21%  Similarity=0.271  Sum_probs=197.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeE----EEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQER----VAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~----vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      .++|++.+.||+|+||.||+|.+..+++.    ||+|.+....  .....+..|+.+++.+.      |+||+++++++.
T Consensus        12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~~~~   85 (325)
T 3kex_A           12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD------HAHIVRLLGLCP   85 (325)
T ss_dssp             TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCC------CTTBCCEEEEEC
T ss_pred             HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCC------CCCcCeEEEEEc
Confidence            46899999999999999999999888776    6777664322  22245566788887764      699999999886


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                       ++..++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||+               
T Consensus        86 -~~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~---------------  148 (325)
T 3kex_A           86 -GSSLQLVTQYLPLGSLLDHVRQHRG-ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLL---------------  148 (325)
T ss_dssp             -BSSEEEEEECCTTCBSHHHHHSSGG-GSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEE---------------
T ss_pred             -CCccEEEEEeCCCCCHHHHHHHccc-cCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEE---------------
Confidence             56789999999 8999999986532 58999999999999999999999999999999999999               


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                               +.++.+||+|||++......     .....||..|+|||++.+..++.++||||||+++|+|++ |..||.
T Consensus       149 ---------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~  219 (325)
T 3kex_A          149 ---------KSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYA  219 (325)
T ss_dssp             ---------SSSSCEEECSCSGGGGSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             ---------CCCCeEEECCCCcccccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCcc
Confidence                     44677999999998764332     234567889999999999999999999999999999999 999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +....+....+......                                                 ..+..++.++.+||
T Consensus       220 ~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~li  250 (325)
T 3kex_A          220 GLRLAEVPDLLEKGERL-------------------------------------------------AQPQICTIDVYMVM  250 (325)
T ss_dssp             TSCTTHHHHHHHTTCBC-------------------------------------------------CCCTTBCTTTTHHH
T ss_pred             ccCHHHHHHHHHcCCCC-------------------------------------------------CCCCcCcHHHHHHH
Confidence            87665554444322100                                                 11124566778999


Q ss_pred             HHccccCCCCCCCHHHHhCC
Q 015867          372 HGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~h  391 (399)
                      .+||..||.+|||+.++++|
T Consensus       251 ~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          251 VKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             HHHTCSCTTTSCCHHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999875

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=9.1e-45  Score=335.95  Aligned_cols=264  Identities=24%  Similarity=0.302  Sum_probs=200.1

Q ss_pred             CccCCCEEEEeeeccccceEEEEEE----EccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECW----DRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      +...++|++++.||+|+||.||+|+    +..+++.||||++.... .....+..|+++++.+.      |+||++++++
T Consensus         6 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~   79 (295)
T 3ugc_A            6 QFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ------HDNIVKYKGV   79 (295)
T ss_dssp             CCCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCC------CTTBCCEEEE
T ss_pred             cCCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCC------CCCEeeEEEE
Confidence            4456789999999999999999998    56789999999987533 33456778888888875      5999999998


Q ss_pred             ecc--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          137 FDY--RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       137 ~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      +..  ....++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.         
T Consensus        80 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~---------  149 (295)
T 3ugc_A           80 CYSAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN---------  149 (295)
T ss_dssp             ECHHHHTSCEEEEECCTTCBHHHHHHHCGG-GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---------
T ss_pred             EecCCCCceEEEEEeCCCCCHHHHHHhccc-ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcC---------
Confidence            854  45789999999 9999999987643 5999999999999999999999999999999999999954         


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE  287 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~  287 (399)
                                     ++.+||+|||++......      .....||..|+|||++.+..++.++||||||+++|+|++|.
T Consensus       150 ---------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~  214 (295)
T 3ugc_A          150 ---------------ENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYI  214 (295)
T ss_dssp             ---------------TTEEEECCCCSCC-------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTT
T ss_pred             ---------------CCeEEEccCcccccccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcc
Confidence                           567999999998764332      22345778899999999999999999999999999999999


Q ss_pred             CCCCCCCcHHHHHHHHHHhCCCC-HHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          288 ALFQTHENLEHLAMMERALGPLP-EHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       288 ~Pf~~~~~~~~~~~i~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      .||......  ..   ...+..+ .....                        .......     ........+..++.+
T Consensus       215 ~~~~~~~~~--~~---~~~~~~~~~~~~~------------------------~~~~~~~-----~~~~~~~~~~~~~~~  260 (295)
T 3ugc_A          215 EKSKSPPAE--FM---RMIGNDKQGQMIV------------------------FHLIELL-----KNNGRLPRPDGCPDE  260 (295)
T ss_dssp             CTTCSHHHH--HH---HHHCTTCCTHHHH------------------------HHHHHHH-----HTTCCCCCCTTCCHH
T ss_pred             cccCCChHH--HH---hhhcCccccchhH------------------------HHHHHHH-----hccCcCCCCcCcCHH
Confidence            998643211  10   1001000 00000                        0000000     001112234567889


Q ss_pred             HHHHHHHccccCCCCCCCHHHHhC
Q 015867          367 LTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      +.+||.+||+.||.+|||+.|+++
T Consensus       261 l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          261 IYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHcCCChhhCCCHHHHHH
Confidence            999999999999999999999875

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=100.00  E-value=3.3e-44  Score=352.95  Aligned_cols=255  Identities=19%  Similarity=0.274  Sum_probs=206.3

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.++|++.+.||+|+||.||+|.+..+++.||||++.... ....+..|.++++.+.+     ++++..+..++...+.
T Consensus         4 ~i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~il~~L~~-----~~~i~~i~~~~~~~~~   77 (483)
T 3sv0_A            4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKT-KHPQLLYESKIYRILQG-----GTGIPNVRWFGVEGDY   77 (483)
T ss_dssp             EETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTC-SSCCHHHHHHHHHHTTT-----STTCCCEEEEEEETTE
T ss_pred             CcCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccc-ccHHHHHHHHHHHHhcC-----CCCCCeEEEEEeeCCE
Confidence            45678999999999999999999999999999999886533 23457789999999875     3566677777778899


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .+|||||++++|.+++..... .+++..+..|+.||+.||+|||++|||||||||+||||..+                 
T Consensus        78 ~~lvme~~g~sL~~ll~~~~~-~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~-----------------  139 (483)
T 3sv0_A           78 NVLVMDLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLG-----------------  139 (483)
T ss_dssp             EEEEEECCCCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCG-----------------
T ss_pred             EEEEEECCCCCHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecC-----------------
Confidence            999999999999999986433 69999999999999999999999999999999999999432                 


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                          +.++.+||+|||++......          ....+||+.|+|||++.+..++.++|||||||+||+|++|..||.+
T Consensus       140 ----~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~  215 (483)
T 3sv0_A          140 ----RRANQVYIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG  215 (483)
T ss_dssp             ----GGTTCEEECCCTTCEECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ----CCCCeEEEEeCCcceeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence                24678999999998753322          1256899999999999999999999999999999999999999987


Q ss_pred             CCcH---HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          293 HENL---EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       293 ~~~~---~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      ....   +.+..+......                                             .........++.++.+
T Consensus       216 ~~~~~~~~~~~~i~~~~~~---------------------------------------------~~~~~l~~~~p~~l~~  250 (483)
T 3sv0_A          216 LKAGTKKQKYEKISEKKVA---------------------------------------------TSIEALCRGYPTEFAS  250 (483)
T ss_dssp             CCCSSHHHHHHHHHHHHHH---------------------------------------------SCHHHHHTTSCHHHHH
T ss_pred             ccchhHHHHHHHHhhcccc---------------------------------------------ccHHHHhcCCcHHHHH
Confidence            5442   222222221100                                             0001112456788999


Q ss_pred             HHHHccccCCCCCCCHHHHhC
Q 015867          370 LLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~  390 (399)
                      ||.+||+.||.+||++.+|++
T Consensus       251 li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          251 YFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhcCChhhCcCHHHHHH
Confidence            999999999999999998764

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-44  Score=342.52  Aligned_cols=250  Identities=17%  Similarity=0.264  Sum_probs=203.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEE-----ccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWD-----RQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|++.+.||+|+||.||+|.+     ..++..||||++...  ......+..|+.+++.+.     .||||+++++++
T Consensus        44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~~~~~~  118 (344)
T 1rjb_A           44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG-----SHENIVNLLGAC  118 (344)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC-----CCTTBCCEEEEE
T ss_pred             HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhc-----CCCCeeeEEEEE
Confidence            46899999999999999999986     346778999999643  233466788999999984     369999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKY---------------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDL  195 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~---------------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Di  195 (399)
                      ...+..++||||+ +++|.+++.....                     ..+++..+..++.||+.||+|||++||+||||
T Consensus       119 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Di  198 (344)
T 1rjb_A          119 TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDL  198 (344)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred             eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCC
Confidence            9999999999999 8999999987542                     23789999999999999999999999999999


Q ss_pred             CCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCc
Q 015867          196 KPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYP  270 (399)
Q Consensus       196 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~  270 (399)
                      ||+|||++                        .++.++|+|||++......     .....||+.|+|||++.+..++.+
T Consensus       199 kp~NIll~------------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~  254 (344)
T 1rjb_A          199 AARNVLVT------------------------HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIK  254 (344)
T ss_dssp             SGGGEEEE------------------------TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHH
T ss_pred             ChhhEEEc------------------------CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChh
Confidence            99999994                        4667999999998653222     134457889999999999999999


Q ss_pred             chhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhh
Q 015867          271 CDMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL  349 (399)
Q Consensus       271 ~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  349 (399)
                      +||||||+++|+|++ |..||.+....+....+......                                         
T Consensus       255 ~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-----------------------------------------  293 (344)
T 1rjb_A          255 SDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFK-----------------------------------------  293 (344)
T ss_dssp             HHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCC-----------------------------------------
T ss_pred             HhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHhcCCC-----------------------------------------
Confidence            999999999999998 99999876654443333221100                                         


Q ss_pred             hhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                             ...+..++.++.+||.+||..||.+|||+.++++|
T Consensus       294 -------~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  328 (344)
T 1rjb_A          294 -------MDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  328 (344)
T ss_dssp             -------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence                   01123457788999999999999999999999875

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=2e-44  Score=332.85  Aligned_cols=254  Identities=23%  Similarity=0.333  Sum_probs=193.0

Q ss_pred             eccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           58 FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        58 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ...++...++|++.+.||+|+||.||+|.+..   .||+|+++...   .....+..|+++++.+.      |+||+.++
T Consensus        16 ~~~~ei~~~~y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~   86 (289)
T 3og7_A           16 ADDWEIPDGQITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR------HVNILLFM   86 (289)
T ss_dssp             --CCBCCTTSCEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCC------CTTBCCEE
T ss_pred             CCCCccCccceeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCC------CCcEEEEE
Confidence            34456777899999999999999999997543   49999986432   23345667777777664      69999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      ++. ..+..++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||++          
T Consensus        87 ~~~-~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~----------  154 (289)
T 3og7_A           87 GYS-TAPQLAIVTQWCEGSSLYHHLHASET-KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH----------  154 (289)
T ss_dssp             EEE-CSSSCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE----------
T ss_pred             eec-cCCccEEEEEecCCCcHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC----------
Confidence            955 556789999999 8999999965443 699999999999999999999999999999999999994          


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhh---CCCCCCcchhHHHHHHHHHHHh
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVIL---GLGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~---~~~~~~~~DiwslG~il~ell~  285 (399)
                                    .++.++|+|||++.....     ......||+.|+|||++.   +..++.++||||||+++|+|++
T Consensus       155 --------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~  220 (289)
T 3og7_A          155 --------------EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMT  220 (289)
T ss_dssp             --------------TTTEEEECCCC------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHH
T ss_pred             --------------CCCCEEEccceeccccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHH
Confidence                          456799999998865332     223457999999999997   5678899999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |..||...+..+....+.......+.                                            .......++.
T Consensus       221 g~~p~~~~~~~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~~  256 (289)
T 3og7_A          221 GQLPYSNINNRDQIIEMVGRGSLSPD--------------------------------------------LSKVRSNCPK  256 (289)
T ss_dssp             SSCTTSSCCCHHHHHHHHHHTSCCCC--------------------------------------------TTSSCTTSCH
T ss_pred             CCCCccccchHHHHHHHhcccccCcc--------------------------------------------hhhccccCCH
Confidence            99999887766655444332211110                                            0111235678


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ++.+||.+||+.||.+|||+.++++
T Consensus       257 ~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          257 RMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHccCChhhCCCHHHHHH
Confidence            8999999999999999999999986

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=6.8e-45  Score=345.44  Aligned_cols=253  Identities=17%  Similarity=0.174  Sum_probs=197.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEcc--------CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceee----
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQ--------TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQ----  132 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~--------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~----  132 (399)
                      .++|++.+.||+|+||.||+|++..        .++.||||++...    ..+..|+++++.+.|      +||++    
T Consensus        41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~----~~~~~E~~~l~~l~h------~niv~~~~~  110 (352)
T 2jii_A           41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD----GRLFNEQNFFQRAAK------PLQVNKWKK  110 (352)
T ss_dssp             SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT----STHHHHHHHHHHHCC------HHHHHHHHH
T ss_pred             CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc----chHHHHHHHHHHhcc------cchhhhhhh
Confidence            4689999999999999999999887        4889999998753    457778899988864      55555    


Q ss_pred             -----------eceeecc-CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          133 -----------IRNWFDY-RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       133 -----------~~~~~~~-~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                                 +++++.. .+..|+||||++++|.+++.......+++..+..++.||+.||+|||++||+||||||+||
T Consensus       111 ~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NI  190 (352)
T 2jii_A          111 LYSTPLLAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENI  190 (352)
T ss_dssp             HTTCTTCSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGE
T ss_pred             hccCCccCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHE
Confidence                       6666665 6889999999999999999876334699999999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC----------CCcccccCCCccchhhhhCCCCCCc
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ----------NHSSIVSTRHYRAPEVILGLGWSYP  270 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~  270 (399)
                      |++.++                      ...+||+|||++.....          ......||+.|+|||++.+..++.+
T Consensus       191 l~~~~~----------------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  248 (352)
T 2jii_A          191 FVDPED----------------------QSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRR  248 (352)
T ss_dssp             EEETTE----------------------EEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHH
T ss_pred             EEcCCC----------------------CceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCch
Confidence            995321                      12799999999865322          1134579999999999999999999


Q ss_pred             chhHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHH-HhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHh
Q 015867          271 CDMWSVGCILVELCTGEALFQTHE-NLEHLAMMER-ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK  348 (399)
Q Consensus       271 ~DiwslG~il~ell~g~~Pf~~~~-~~~~~~~i~~-~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  348 (399)
                      +|||||||++|+|++|..||.... ..+....... .....+.            +         +.             
T Consensus       249 ~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~------------~---------~~-------------  294 (352)
T 2jii_A          249 SDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGP------------F---------VG-------------  294 (352)
T ss_dssp             HHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCC------------E---------EC-------------
T ss_pred             hhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhh------------h---------hh-------------
Confidence            999999999999999999998754 3332222221 1110000            0         00             


Q ss_pred             hhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                             .......++.++.+||.+||+.||.+|||+.++++
T Consensus       295 -------~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          295 -------PCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             -------TTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             -------hccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence                   00112356788999999999999999999999875

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=100.00  E-value=7.5e-44  Score=332.13  Aligned_cols=252  Identities=27%  Similarity=0.418  Sum_probs=192.9

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      +....++|++.+.||+|+||.||+|.+..+++.||||+++..    ......+..|+.+++.+.      |+||++++++
T Consensus        27 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~  100 (310)
T 2wqm_A           27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN------HPNVIKYYAS  100 (310)
T ss_dssp             TTSSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCC------CTTBCCEEEE
T ss_pred             ccccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCC------CCCEeeEEEE
Confidence            444557899999999999999999999999999999999742    233455677888887774      6999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      +...+..++||||+ +++|.+++...  ....+++..+..++.||+.||.|||++||+|+||||+|||+           
T Consensus       101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~-----------  169 (310)
T 2wqm_A          101 FIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFI-----------  169 (310)
T ss_dssp             EEETTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-----------
T ss_pred             EEcCCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEE-----------
Confidence            99999999999999 88999999752  23369999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                                   +.++.++|+|||++......   .....||+.|+|||++.+..++.++||||||+++|+|++|..||
T Consensus       170 -------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~  236 (310)
T 2wqm_A          170 -------------TATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF  236 (310)
T ss_dssp             -------------CTTSCEEECCC------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred             -------------cCCCCEEEEeccceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                         44678999999988654332   23457899999999999999999999999999999999999999


Q ss_pred             CCCCc--HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          291 QTHEN--LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       291 ~~~~~--~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      .+...  .+....+...  .                        +|                      ......++.++.
T Consensus       237 ~~~~~~~~~~~~~~~~~--~------------------------~~----------------------~~~~~~~~~~l~  268 (310)
T 2wqm_A          237 YGDKMNLYSLCKKIEQC--D------------------------YP----------------------PLPSDHYSEELR  268 (310)
T ss_dssp             C---CCHHHHHHHHHTT--C------------------------SC----------------------CCCTTTSCHHHH
T ss_pred             cccchhHHHHHHHhhcc--c------------------------CC----------------------CCcccccCHHHH
Confidence            75432  1222211110  0                        00                      011135677899


Q ss_pred             HHHHHccccCCCCCCCHHHHhC
Q 015867          369 DLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~  390 (399)
                      +||.+||..||.+|||+.++++
T Consensus       269 ~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          269 QLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHcCCChhhCCCHHHHHH
Confidence            9999999999999999999986

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.4e-44  Score=335.57  Aligned_cols=247  Identities=23%  Similarity=0.315  Sum_probs=192.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      .++|++.+.||+|+||.||+|.+..+++.||||++.....    ....+..|+.+++.+      .||||+++++++..+
T Consensus        33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l------~hp~iv~~~~~~~~~  106 (309)
T 2h34_A           33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRL------QEPHVVPIHDFGEID  106 (309)
T ss_dssp             -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTC------CCTTBCCEEEEEEET
T ss_pred             eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhc------CCCCeeEEEEEEeeC
Confidence            4679999999999999999999999999999999865322    224455676666665      469999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++...+  .+++..+..++.||+.||.|||++||+|+||||+|||+                 
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~-----------------  167 (309)
T 2h34_A          107 GQLYVDMRLINGVDLAAMLRRQG--PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV-----------------  167 (309)
T ss_dssp             TEEEEEEECCCCEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE-----------------
T ss_pred             CeEEEEEEecCCCCHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEE-----------------
Confidence            9999999999 889999998765  59999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                             +.++.++|+|||++......    .....||+.|+|||++.+..++.++||||||+++|+|++|..||...+.
T Consensus       168 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~  240 (309)
T 2h34_A          168 -------SADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL  240 (309)
T ss_dssp             -------CTTSCEEECSCCC----------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH
T ss_pred             -------cCCCCEEEecCccCccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH
Confidence                   34677999999988654332    2345799999999999999999999999999999999999999987654


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      ......+.. ....                                              .....+.++.++.+||.+||
T Consensus       241 ~~~~~~~~~-~~~~----------------------------------------------~~~~~~~~~~~l~~li~~~l  273 (309)
T 2h34_A          241 SVMGAHINQ-AIPR----------------------------------------------PSTVRPGIPVAFDAVIARGM  273 (309)
T ss_dssp             HHHHHHHHS-CCCC----------------------------------------------GGGTSTTCCTHHHHHHHHHT
T ss_pred             HHHHHHhcc-CCCC----------------------------------------------ccccCCCCCHHHHHHHHHhc
Confidence            322222111 0000                                              01123467788999999999


Q ss_pred             ccCCCCCC-CHHHHhC
Q 015867          376 RYDPSERL-TARQALN  390 (399)
Q Consensus       376 ~~dP~~R~-t~~ell~  390 (399)
                      +.||.+|| |++++++
T Consensus       274 ~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          274 AKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             CSSGGGSCSSHHHHHH
T ss_pred             cCCHHHHHHhHHHHHH
Confidence            99999999 7887764

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=100.00  E-value=1.9e-44  Score=334.48  Aligned_cols=253  Identities=21%  Similarity=0.277  Sum_probs=194.3

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-  139 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-  139 (399)
                      +..+.++|++.+.||+|+||+||+|.+  +++.||||++...  .......|.+++....    ..||||+++++++.. 
T Consensus         3 ~~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~--~~~~~~~e~~~~~~~~----l~h~niv~~~~~~~~~   74 (301)
T 3q4u_A            3 QRTVARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR--DEKSWFRETELYNTVM----LRHENILGFIASDMTS   74 (301)
T ss_dssp             -CCCGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG--GHHHHHHHHHHHHHTC----CCCTTBCCEEEEEEEE
T ss_pred             cccccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc--cchhhHHHHHHHHHhh----ccCcCeeeEEEeeccc
Confidence            356778999999999999999999976  6889999998653  2344556667666642    357999999988543 


Q ss_pred             ---CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCccccCCCCCcEEEeeccc
Q 015867          140 ---RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH--------DLRLIHTDLKPENILLVSSEF  207 (399)
Q Consensus       140 ---~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH--------~~givH~Dikp~NIll~~~~~  207 (399)
                         ....++||||+ +++|.++++..   .+++..+..++.||+.||+|||        +.||+||||||+|||+     
T Consensus        75 ~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill-----  146 (301)
T 3q4u_A           75 RHSSTQLWLITHYHEMGSLYDYLQLT---TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV-----  146 (301)
T ss_dssp             ETTEEEEEEEECCCTTCBHHHHHTTC---CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEE-----
T ss_pred             cCCCceeEEehhhccCCCHHHHHhhc---ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEE-----
Confidence               45789999999 88999999654   4999999999999999999999        9999999999999999     


Q ss_pred             ccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCC------CCCCcchhH
Q 015867          208 IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGL------GWSYPCDMW  274 (399)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~------~~~~~~Diw  274 (399)
                                         +.++.+||+|||++......       .....||+.|+|||++.+.      .++.++|||
T Consensus       147 -------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Dvw  207 (301)
T 3q4u_A          147 -------------------KKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIW  207 (301)
T ss_dssp             -------------------CTTSCEEECCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHH
T ss_pred             -------------------cCCCCEEEeeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHH
Confidence                               45678999999998653222       2334799999999999876      455799999


Q ss_pred             HHHHHHHHHHhC----------CCCCCCCCc----HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccch
Q 015867          275 SVGCILVELCTG----------EALFQTHEN----LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR  340 (399)
Q Consensus       275 slG~il~ell~g----------~~Pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  340 (399)
                      ||||++|+|++|          ..||.....    ......+......                     ...+|.     
T Consensus       208 slG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~-----  261 (301)
T 3q4u_A          208 AFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ---------------------RPNIPN-----  261 (301)
T ss_dssp             HHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCC---------------------CCCCCG-----
T ss_pred             HHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCC---------------------CCCCCh-----
Confidence            999999999999          888854321    1222211111000                     000110     


Q ss_pred             HHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          341 ESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                                      ......++.++.+||.+||+.||.+|||+.|+++
T Consensus       262 ----------------~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          262 ----------------RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             ----------------GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ----------------hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence                            0112356788999999999999999999999986

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=4e-44  Score=332.44  Aligned_cols=243  Identities=27%  Similarity=0.483  Sum_probs=189.5

Q ss_pred             cCCCEEEE-eeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc---
Q 015867           64 LTPRYKIL-SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY---  139 (399)
Q Consensus        64 ~~~~y~~~-~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~---  139 (399)
                      +.++|.+. +.||+|+||.||+|.+..+++.||||+++..    .....|+.++..+.     .|+||+++++++..   
T Consensus        15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~----~~~~~e~~~~~~~~-----~h~~i~~~~~~~~~~~~   85 (299)
T 3m2w_A           15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS-----QCPHIVRIVDVYENLYA   85 (299)
T ss_dssp             GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT-----TSTTBCCEEEEEEEEET
T ss_pred             cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc----HHHHHHHHHHHHhc-----cCCCchhHHhhhhhhcC
Confidence            44568887 7899999999999999999999999999653    44566777775543     47999999998876   


Q ss_pred             -CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          140 -RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       140 -~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                       ....++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++.+            
T Consensus        86 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~------------  153 (299)
T 3m2w_A           86 GRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK------------  153 (299)
T ss_dssp             TEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSS------------
T ss_pred             CCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecC------------
Confidence             67899999999 8899999998766679999999999999999999999999999999999999542            


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                               ..++.++|+|||++....                   +..++.++|||||||++|+|++|..||...+...
T Consensus       154 ---------~~~~~~kl~Dfg~a~~~~-------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~  205 (299)
T 3m2w_A          154 ---------RPNAILKLTDFGFAKETT-------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA  205 (299)
T ss_dssp             ---------STTCCEEECCCTTCEECT-------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC-----
T ss_pred             ---------CCCCcEEEeccccccccc-------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchh
Confidence                     126789999999875332                   2357889999999999999999999997654322


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+..                   .. ......+                      .......++.++.+||.+||+.
T Consensus       206 ~~~~~~~-------------------~~-~~~~~~~----------------------~~~~~~~~~~~~~~li~~~l~~  243 (299)
T 3m2w_A          206 ISPGMKT-------------------RI-RMGQYEF----------------------PNPEWSEVSEEVKMLIRNLLKT  243 (299)
T ss_dssp             --CCSCC-------------------SS-CTTCCSS----------------------CHHHHTTSCHHHHHHHHHHTCS
T ss_pred             hhHHHHH-------------------HH-hhccccC----------------------CchhcccCCHHHHHHHHHHccc
Confidence            1100000                   00 0000000                      0111245788899999999999


Q ss_pred             CCCCCCCHHHHhCCccccCC
Q 015867          378 DPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~~  397 (399)
                      ||.+|||+.|+++||||++.
T Consensus       244 dP~~Rps~~e~l~hp~~~~~  263 (299)
T 3m2w_A          244 EPTQRMTITEFMNHPWIMQS  263 (299)
T ss_dssp             STTTSCCHHHHHTSHHHHTG
T ss_pred             ChhhCCCHHHHhcChhhccc
Confidence            99999999999999999864

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=100.00  E-value=2.6e-44  Score=335.87  Aligned_cols=251  Identities=21%  Similarity=0.297  Sum_probs=203.2

Q ss_pred             cCCCEEEEeeeccccceEEEEEEE-----ccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWD-----RQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      ..++|++.+.||+|+||.||+|.+     ..+++.||||+++...  .....+..|+.+++.+.     +||||++++++
T Consensus        25 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~~~~~   99 (316)
T 2xir_A           25 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-----HHLNVVNLLGA   99 (316)
T ss_dssp             CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-----CCTTBCCEEEE
T ss_pred             chhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcc-----cCCCeeeEEEE
Confidence            356899999999999999999984     4567899999997532  23356778999998885     36999999999


Q ss_pred             eccC-CeEEEEEccC-CCCHHHHHHhcCCC--------------CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          137 FDYR-NHICIVFEKL-GPSLFDFLKRNKYC--------------PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       137 ~~~~-~~~~lv~e~~-~~~L~~~l~~~~~~--------------~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      +... ...++||||+ +++|.+++......              .+++..+..++.||+.||.|||++||+||||||+||
T Consensus       100 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Ni  179 (316)
T 2xir_A          100 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNI  179 (316)
T ss_dssp             ECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             EecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceE
Confidence            8765 4699999999 88999999876531              288999999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWS  275 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Diws  275 (399)
                      |++                        .++.+||+|||++.......     ....||+.|+|||++.+..++.++||||
T Consensus       180 l~~------------------------~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~s  235 (316)
T 2xir_A          180 LLS------------------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS  235 (316)
T ss_dssp             EEC------------------------GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHH
T ss_pred             EEC------------------------CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHH
Confidence            994                        45679999999987543322     2456788999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          276 VGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       276 lG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      ||+++|+|++ |..||.+....+...........                                              
T Consensus       236 lG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~----------------------------------------------  269 (316)
T 2xir_A          236 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTR----------------------------------------------  269 (316)
T ss_dssp             HHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCC----------------------------------------------
T ss_pred             HHHHHHHHHhCCCCCCcccchhHHHHHHhccCcc----------------------------------------------
Confidence            9999999998 99999876644333222221110                                              


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                        ...+..++.++.++|.+||+.||.+|||+.|+++|
T Consensus       270 --~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          270 --MRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             --CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             --CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence              01123457788999999999999999999999875

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=8.5e-45  Score=333.87  Aligned_cols=248  Identities=23%  Similarity=0.323  Sum_probs=203.8

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-  139 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-  139 (399)
                      +..+.++|++.+.||+|+||.||+|.+..+++.||+|++....   ..+..|+++++.+.      |+||+++++++.. 
T Consensus         6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~e~~~l~~l~------h~~i~~~~~~~~~~   76 (284)
T 2a19_B            6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN---EKAEREVKALAKLD------HVNIVHYNGCWDGF   76 (284)
T ss_dssp             CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS---GGGHHHHHHHHHCC------CTTBCCEEEEEEEE
T ss_pred             cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc---HHHHHHHHHHHhCC------CCCEEEEeeeEecc
Confidence            4456678999999999999999999999899999999997543   45667888988885      5999999998754 


Q ss_pred             ---------------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 015867          140 ---------------RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLV  203 (399)
Q Consensus       140 ---------------~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~  203 (399)
                                     ....++||||+ +++|.+++.......+++..+..++.||+.||.|||++||+|+||||+|||++
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~  156 (284)
T 2a19_B           77 DYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV  156 (284)
T ss_dssp             EEC---------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE
T ss_pred             ccCcccccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc
Confidence                           45689999999 88999999876444799999999999999999999999999999999999995


Q ss_pred             ecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHH
Q 015867          204 SSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILV  281 (399)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~  281 (399)
                      .                        ++.++|+|||++.....  ......||+.|+|||++.+..++.++||||||+++|
T Consensus       157 ~------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~  212 (284)
T 2a19_B          157 D------------------------TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILA  212 (284)
T ss_dssp             E------------------------TTEEEECCCTTCEESSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHH
T ss_pred             C------------------------CCCEEECcchhheeccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHH
Confidence            4                        56799999998866433  234567999999999999999999999999999999


Q ss_pred             HHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccch
Q 015867          282 ELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD  361 (399)
Q Consensus       282 ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (399)
                      +|++|..||....  .....+..                                                    .....
T Consensus       213 ~l~~~~~~~~~~~--~~~~~~~~----------------------------------------------------~~~~~  238 (284)
T 2a19_B          213 ELLHVCDTAFETS--KFFTDLRD----------------------------------------------------GIISD  238 (284)
T ss_dssp             HHHSCCSSHHHHH--HHHHHHHT----------------------------------------------------TCCCT
T ss_pred             HHHhcCCcchhHH--HHHHHhhc----------------------------------------------------ccccc
Confidence            9999998874210  11111100                                                    00113


Q ss_pred             hhhhHHHHHHHHccccCCCCCCCHHHHhCCcccc
Q 015867          362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       362 ~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      .++..+.+||.+||..||.+|||+.|+++|.+.-
T Consensus       239 ~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~  272 (284)
T 2a19_B          239 IFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW  272 (284)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence            4567789999999999999999999999987653

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=100.00  E-value=4.4e-44  Score=337.37  Aligned_cols=249  Identities=18%  Similarity=0.286  Sum_probs=205.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-------cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-------QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-------~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      .++|++.+.||+|+||.||+|.+.       .++..||||+++...  .....+..|+++++.+.     .||||+++++
T Consensus        34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~~~~  108 (334)
T 2pvf_A           34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIG-----KHKNIINLLG  108 (334)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHC-----CCTTBCCEEE
T ss_pred             HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhh-----cCCCEeeEEE
Confidence            468999999999999999999875       457789999997532  33456778999998884     3699999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcCC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNKY--------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      ++...+..++||||+ +++|.+++.....              ..+++..+..++.||+.||.|||++||+||||||+||
T Consensus       109 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NI  188 (334)
T 2pvf_A          109 ACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNV  188 (334)
T ss_dssp             EECSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGE
T ss_pred             EEccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceE
Confidence            999999999999999 8899999987542              2489999999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWS  275 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Diws  275 (399)
                      |+                        +.++.+||+|||++......     .....+|+.|+|||++.+..++.++||||
T Consensus       189 ll------------------------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s  244 (334)
T 2pvf_A          189 LV------------------------TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS  244 (334)
T ss_dssp             EE------------------------CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHH
T ss_pred             EE------------------------cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHH
Confidence            99                        44677999999998754332     22345788899999999989999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          276 VGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       276 lG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      ||+++|+|++ |..||.+.+..+....+......                                              
T Consensus       245 lG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~----------------------------------------------  278 (334)
T 2pvf_A          245 FGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRM----------------------------------------------  278 (334)
T ss_dssp             HHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCC----------------------------------------------
T ss_pred             HHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCC----------------------------------------------
Confidence            9999999999 99999887766655544332110                                              


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                         ..+..++.++.+||.+||+.||.+|||+.|++++
T Consensus       279 ---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          279 ---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             ---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             ---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence               1123567788999999999999999999999864

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=100.00  E-value=2.5e-44  Score=330.28  Aligned_cols=246  Identities=24%  Similarity=0.383  Sum_probs=204.4

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..++|++.+.||+|+||.||+|.+. ++..||||++.........+..|+++++.+.      |+||+++++++. .+..
T Consensus        11 ~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~-~~~~   82 (279)
T 1qpc_A           11 PRETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ------HQRLVRLYAVVT-QEPI   82 (279)
T ss_dssp             CGGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCC------CTTBCCEEEEEC-SSSC
T ss_pred             CHHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcccHHHHHHHHHHHHhCC------CcCcceEEEEEc-CCCc
Confidence            3568999999999999999999864 5678999999765555677888999999885      599999999886 4568


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||+                    
T Consensus        83 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~--------------------  142 (279)
T 1qpc_A           83 YIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV--------------------  142 (279)
T ss_dssp             EEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE--------------------
T ss_pred             EEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEE--------------------
Confidence            9999999 8999999975433359999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  297 (399)
                          +.++.++|+|||++.......    ....+|..|+|||++.+..++.++||||||+++|+|++ |..||.+.+..+
T Consensus       143 ----~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~  218 (279)
T 1qpc_A          143 ----SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPE  218 (279)
T ss_dssp             ----CTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             ----cCCCCEEECCCcccccccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHH
Confidence                346779999999987644322    23456789999999998899999999999999999999 999998877666


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+.....                                                 ...+..++.++.+||.+||..
T Consensus       219 ~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~li~~~l~~  249 (279)
T 1qpc_A          219 VIQNLERGYR-------------------------------------------------MVRPDNCPEELYQLMRLCWKE  249 (279)
T ss_dssp             HHHHHHTTCC-------------------------------------------------CCCCTTCCHHHHHHHHHHTCS
T ss_pred             HHHHHhcccC-------------------------------------------------CCCcccccHHHHHHHHHHhcc
Confidence            5544432110                                                 011235678899999999999


Q ss_pred             CCCCCCCHHHHhC
Q 015867          378 DPSERLTARQALN  390 (399)
Q Consensus       378 dP~~R~t~~ell~  390 (399)
                      ||.+|||+.++++
T Consensus       250 ~p~~Rps~~~l~~  262 (279)
T 1qpc_A          250 RPEDRPTFDYLRS  262 (279)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhhCCCHHHHHH
Confidence            9999999999875

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.4e-44  Score=340.50  Aligned_cols=246  Identities=27%  Similarity=0.386  Sum_probs=182.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee------
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF------  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~------  137 (399)
                      ..+|++.+.||+|+||.||+|.+..+++.||||++.... .....+..|+.+++.+.     +|+||+++++++      
T Consensus        27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----~h~~iv~~~~~~~~~~~~  101 (337)
T 3ll6_A           27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLS-----GHPNIVQFCSAASIGKEE  101 (337)
T ss_dssp             TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHT-----TSTTBCCEEEEEEECTTT
T ss_pred             CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhc-----cCCChhhccccccccccc
Confidence            347999999999999999999999999999999885433 33456777888888886     369999999988      


Q ss_pred             --ccCCeEEEEEccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccCCC
Q 015867          138 --DYRNHICIVFEKLGPSLFDFLKRN-KYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       138 --~~~~~~~lv~e~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~~~  212 (399)
                        .....+++||||++++|.+++... ....+++..+..++.||+.||.|||++|  |+||||||+|||+          
T Consensus       102 ~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~----------  171 (337)
T 3ll6_A          102 SDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL----------  171 (337)
T ss_dssp             STTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEE----------
T ss_pred             cccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEE----------
Confidence              345578999999988999988752 2236999999999999999999999999  9999999999999          


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC---------------cccccCCCccchhhh---hCCCCCCcchhH
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH---------------SSIVSTRHYRAPEVI---LGLGWSYPCDMW  274 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~gt~~y~aPE~~---~~~~~~~~~Diw  274 (399)
                                    +.++.+||+|||++.......               ....||+.|+|||++   .+..++.++|||
T Consensus       172 --------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~  237 (337)
T 3ll6_A          172 --------------SNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIW  237 (337)
T ss_dssp             --------------CTTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHH
T ss_pred             --------------CCCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHH
Confidence                          346679999999987643321               145689999999998   566789999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          275 SVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       275 slG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      ||||++|+|++|..||...........    ...                        +                     
T Consensus       238 slG~il~el~~g~~p~~~~~~~~~~~~----~~~------------------------~---------------------  268 (337)
T 3ll6_A          238 ALGCILYLLCFRQHPFEDGAKLRIVNG----KYS------------------------I---------------------  268 (337)
T ss_dssp             HHHHHHHHHHHSSCCC----------------CC------------------------C---------------------
T ss_pred             HHHHHHHHHHhCCCCCcchhHHHhhcC----ccc------------------------C---------------------
Confidence            999999999999999975443221110    000                        0                     


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                         ......+..+.+||.+||+.||.+|||+.|+++|
T Consensus       269 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  302 (337)
T 3ll6_A          269 ---PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ  302 (337)
T ss_dssp             ---CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ---CcccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence               1112345667899999999999999999999986

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.2e-43  Score=323.80  Aligned_cols=244  Identities=15%  Similarity=0.155  Sum_probs=197.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC-
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-  140 (399)
                      .++|++.+.||+|+||.||+|.+.  ++.||||++....   .....+..|+.++      ....||||+++++++.+. 
T Consensus         9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l------~~l~h~~iv~~~~~~~~~~   80 (271)
T 3kmu_A            9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRL------RIFSHPNVLPVLGACQSPP   80 (271)
T ss_dssp             GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGG------CCCSCTTEECEEEEECTTT
T ss_pred             HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHH------HhcCCCchhheEEEEccCC
Confidence            467999999999999999999874  8889999997532   2223344444444      444679999999999876 


Q ss_pred             -CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccCCCCcCC
Q 015867          141 -NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       141 -~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                       +..++||||+ +++|.+++.......+++..+..++.||+.||.|||++|  |+||||||+|||++             
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~-------------  147 (271)
T 3kmu_A           81 APHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID-------------  147 (271)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEEC-------------
T ss_pred             CCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEc-------------
Confidence             7899999999 899999998876556999999999999999999999999  99999999999994             


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCC---cchhHHHHHHHHHHHhCCCCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSY---PCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                 .++.++|+|||++....  .....||+.|+|||++.+..++.   ++||||||+++|+|++|..||...
T Consensus       148 -----------~~~~~~l~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  214 (271)
T 3kmu_A          148 -----------EDMTARISMADVKFSFQ--SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADL  214 (271)
T ss_dssp             -----------TTSCEEEEGGGSCCTTS--CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTS
T ss_pred             -----------CCcceeEEeccceeeec--ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCcccc
Confidence                       46678888888765422  23457899999999998875554   799999999999999999999887


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+....+......                                                ...+..++.++.+||.+
T Consensus       215 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~~li~~  246 (271)
T 3kmu_A          215 SNMEIGMKVALEGLR------------------------------------------------PTIPPGISPHVSKLMKI  246 (271)
T ss_dssp             CHHHHHHHHHHSCCC------------------------------------------------CCCCTTCCHHHHHHHHH
T ss_pred             ChHHHHHHHHhcCCC------------------------------------------------CCCCCCCCHHHHHHHHH
Confidence            776655444322111                                                01123567889999999


Q ss_pred             ccccCCCCCCCHHHHhC
Q 015867          374 LLRYDPSERLTARQALN  390 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~  390 (399)
                      ||+.||.+|||+.++++
T Consensus       247 ~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          247 CMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             HTCSSGGGSCCHHHHHH
T ss_pred             HcCCChhhCcCHHHHHH
Confidence            99999999999999986

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.7e-44  Score=339.17  Aligned_cols=245  Identities=20%  Similarity=0.292  Sum_probs=194.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEE----EEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERV----AIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~v----aiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      .++|++.+.||+|+||.||+|.+..+++.+    |+|.+...  ......+..|+.+++.+.      ||||+++++++.
T Consensus        14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~   87 (327)
T 3lzb_A           14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD------NPHVCRLLGICL   87 (327)
T ss_dssp             TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCC------BTTBCCCCEEEE
T ss_pred             HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCC------CCCeeEEEEEEe
Confidence            468999999999999999999998887765    56655432  223456777888887764      699999999988


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      ... .++||+++ +++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||++.             
T Consensus        88 ~~~-~~~v~~~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~-------------  152 (327)
T 3lzb_A           88 TST-VQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT-------------  152 (327)
T ss_dssp             SSS-EEEEECCCSSCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE-------------
T ss_pred             cCC-ceEEEEecCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcC-------------
Confidence            765 77888888 9999999987543 6999999999999999999999999999999999999954             


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                                 ++.+||+|||++......     .....||+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus       153 -----------~~~~kL~DfG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~  221 (327)
T 3lzb_A          153 -----------PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD  221 (327)
T ss_dssp             -----------TTEEEECCTTC----------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             -----------CCCEEEccCcceeEccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCC
Confidence                       567999999998764322     123456788999999999999999999999999999999 999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+....+.....                                                 ...++.++.++.+||
T Consensus       222 ~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~li  252 (327)
T 3lzb_A          222 GIPASEISSILEKGER-------------------------------------------------LPQPPICTIDVYMIM  252 (327)
T ss_dssp             TCCGGGHHHHHHTTCC-------------------------------------------------CCCCTTBCHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCC-------------------------------------------------CCCCccCCHHHHHHH
Confidence            8776555444332111                                                 011235677899999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||+.||.+|||+.|+++
T Consensus       253 ~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          253 RKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCChhHCcCHHHHHH
Confidence            9999999999999999886

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2.3e-44  Score=338.29  Aligned_cols=248  Identities=21%  Similarity=0.295  Sum_probs=201.2

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEE--EEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERV--AIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~v--aiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|++..++..+  |+|.+....  .....+..|+++++.+.     .||||+++++++.+.+
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~-----~hp~iv~~~~~~~~~~   99 (327)
T 1fvr_A           25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHRG   99 (327)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC-----CCTTBCCEEEEEEETT
T ss_pred             HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhcc-----CCCchhhhceeeeeCC
Confidence            57999999999999999999998888865  999886422  23345667887777763     4799999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          142 HICIVFEKL-GPSLFDFLKRNK--------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                      ..++||||+ +++|.+++....              ...+++..+..++.||+.||.|||++||+||||||+|||++   
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---  176 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---  176 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc---
Confidence            999999999 889999997653              23699999999999999999999999999999999999994   


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  284 (399)
                                           .++.+||+|||++......  .....+|+.|+|||++.+..++.++||||||+++|+|+
T Consensus       177 ---------------------~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell  235 (327)
T 1fvr_A          177 ---------------------ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV  235 (327)
T ss_dssp             ---------------------GGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             ---------------------CCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHH
Confidence                                 4567999999998643322  23345788999999999989999999999999999999


Q ss_pred             h-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhh
Q 015867          285 T-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA  363 (399)
Q Consensus       285 ~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (399)
                      + |..||.+.+..+....+....                                                 ....+..+
T Consensus       236 t~g~~pf~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~  266 (327)
T 1fvr_A          236 SLGGTPYCGMTCAELYEKLPQGY-------------------------------------------------RLEKPLNC  266 (327)
T ss_dssp             TTSCCTTTTCCHHHHHHHGGGTC-------------------------------------------------CCCCCTTB
T ss_pred             cCCCCCCCCCcHHHHHHHhhcCC-------------------------------------------------CCCCCCCC
Confidence            8 999998877655444332110                                                 00112356


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          364 RSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       364 ~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      +.++.+||.+||+.||.+|||+.+++++
T Consensus       267 ~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          267 DDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            7889999999999999999999999875

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.9e-44  Score=329.77  Aligned_cols=247  Identities=24%  Similarity=0.310  Sum_probs=203.0

Q ss_pred             CCCEEEEe-eeccccceEEEEEEEc--cCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           65 TPRYKILS-KMGEGTFGRVLECWDR--QTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        65 ~~~y~~~~-~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .++|.+.+ .||+|+||.||+|.+.  .++..||||+++..  ......+..|+++++.+.      ||||+++++++ .
T Consensus         8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~-~   80 (287)
T 1u59_A            8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD------NPYIVRLIGVC-Q   80 (287)
T ss_dssp             GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCC------CTTBCCEEEEE-E
T ss_pred             HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCC------CCCEeEEEEEe-c
Confidence            45788887 9999999999999854  46888999999753  234456778888888884      59999999998 4


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..++||||+ +++|.+++.... ..+++..+..++.||+.||.|||++||+||||||+|||++.              
T Consensus        81 ~~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~--------------  145 (287)
T 1u59_A           81 AEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN--------------  145 (287)
T ss_dssp             SSSEEEEEECCTTEEHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE--------------
T ss_pred             CCCcEEEEEeCCCCCHHHHHHhCC-ccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcC--------------
Confidence            56799999999 889999997543 25999999999999999999999999999999999999953              


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                                ++.++|+|||++.......      ....||+.|+|||++.+..++.++||||||+++|+|++ |..||.
T Consensus       146 ----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~  215 (287)
T 1u59_A          146 ----------RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK  215 (287)
T ss_dssp             ----------TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             ----------CCCEEECcccceeeeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcc
Confidence                      5679999999987643221      23356889999999998899999999999999999998 999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+.....                                                 ...++.++.++.+||
T Consensus       216 ~~~~~~~~~~i~~~~~-------------------------------------------------~~~~~~~~~~l~~li  246 (287)
T 1u59_A          216 KMKGPEVMAFIEQGKR-------------------------------------------------MECPPECPPELYALM  246 (287)
T ss_dssp             TCCTHHHHHHHHTTCC-------------------------------------------------CCCCTTCCHHHHHHH
T ss_pred             cCCHHHHHHHHhcCCc-------------------------------------------------CCCCCCcCHHHHHHH
Confidence            8777665554433210                                                 011235678899999


Q ss_pred             HHccccCCCCCCCHHHHhCCc
Q 015867          372 HGLLRYDPSERLTARQALNHP  392 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp  392 (399)
                      .+||..||.+|||+.++++|.
T Consensus       247 ~~~l~~~p~~Rps~~~l~~~l  267 (287)
T 1u59_A          247 SDCWIYKWEDRPDFLTVEQRM  267 (287)
T ss_dssp             HHTTCSSGGGSCCHHHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHHHH
Confidence            999999999999999998863

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=5.2e-44  Score=336.84  Aligned_cols=257  Identities=20%  Similarity=0.268  Sum_probs=195.3

Q ss_pred             eccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           58 FNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        58 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ...+..+.++|++.+.||+|+||.||+|.+.  ++.||||++....  ......|.+++..+    ...|+||+++++++
T Consensus        29 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~e~~~~~~~----~~~h~~i~~~~~~~  100 (337)
T 3mdy_A           29 LLVQRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE--EASWFRETEIYQTV----LMRHENILGFIAAD  100 (337)
T ss_dssp             HHHHTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG--HHHHHHHHHHHTST----TCCCTTBCCEEEEE
T ss_pred             cccccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc--cchhhhHHHHHHHH----hhcCCCeeeEEEEE
Confidence            4455667789999999999999999999864  8899999986533  23344454544443    23689999999998


Q ss_pred             ccC----CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC--------CccccCCCCCcEEEee
Q 015867          138 DYR----NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL--------RLIHTDLKPENILLVS  204 (399)
Q Consensus       138 ~~~----~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~--------givH~Dikp~NIll~~  204 (399)
                      ...    ...++||||+ +++|.+++....   +++..+..++.|++.||.|||++        ||+||||||+|||+  
T Consensus       101 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill--  175 (337)
T 3mdy_A          101 IKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV--  175 (337)
T ss_dssp             EESCGGGCEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEE--
T ss_pred             ccCCCCCCceEEEEeccCCCcHHHHhhccC---CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEE--
Confidence            876    7899999999 889999997754   99999999999999999999999        99999999999999  


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-------cccccCCCccchhhhhCCCCCCc------c
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-------SSIVSTRHYRAPEVILGLGWSYP------C  271 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~------~  271 (399)
                                            +.++.+||+|||++.......       ....||+.|+|||++.+..++..      +
T Consensus       176 ----------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  233 (337)
T 3mdy_A          176 ----------------------KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA  233 (337)
T ss_dssp             ----------------------CTTSCEEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHH
T ss_pred             ----------------------CCCCCEEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCcccc
Confidence                                  446689999999986533221       24579999999999988776665      9


Q ss_pred             hhHHHHHHHHHHHhC----------CCCCCCCCc----HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCc
Q 015867          272 DMWSVGCILVELCTG----------EALFQTHEN----LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGA  337 (399)
Q Consensus       272 DiwslG~il~ell~g----------~~Pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~  337 (399)
                      |||||||++|+|++|          ..||.....    ......+.....                     ....+|   
T Consensus       234 DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~---  289 (337)
T 3mdy_A          234 DMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKK---------------------LRPSFP---  289 (337)
T ss_dssp             HHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSC---------------------CCCCCC---
T ss_pred             chHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhc---------------------cCcccc---
Confidence            999999999999999          566643211    111111100000                     000000   


Q ss_pred             cchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          338 VSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                                        .......++.++.+||.+||+.||.+|||+.++++|
T Consensus       290 ------------------~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          290 ------------------NRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             ------------------GGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             ------------------ccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence                              011123678889999999999999999999999874

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=7.4e-44  Score=327.51  Aligned_cols=247  Identities=23%  Similarity=0.323  Sum_probs=200.4

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEcc---CCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQ---TQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..++|++.+.||+|+||.||+|.+..   ++..||+|++...  ......+..|+.+++.+.      ||||+++++++.
T Consensus        10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~   83 (281)
T 3cc6_A           10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD------HPHIVKLIGIIE   83 (281)
T ss_dssp             CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHC------CTTBCCEEEEEC
T ss_pred             cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCC------CCCcceEEEEEc
Confidence            34689999999999999999998643   3456999998753  234466778999999885      599999999887


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +. ..++||||+ +++|.+++...+. .+++..+..++.||+.||.|||++||+||||||+|||++.             
T Consensus        84 ~~-~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~-------------  148 (281)
T 3cc6_A           84 EE-PTWIIMELYPYGELGHYLERNKN-SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS-------------  148 (281)
T ss_dssp             SS-SCEEEEECCTTCBHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEE-------------
T ss_pred             CC-CCEEEEecCCCCCHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECC-------------
Confidence            54 568999999 8999999987543 5899999999999999999999999999999999999954             


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT  292 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~  292 (399)
                                 ++.++|+|||++......    .....+|+.|+|||++.+..++.++||||||+++|+|++ |..||..
T Consensus       149 -----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~  217 (281)
T 3cc6_A          149 -----------PECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFW  217 (281)
T ss_dssp             -----------TTEEEECCCCGGGCC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             -----------CCcEEeCccCCCcccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCccc
Confidence                       567999999988764332    233457889999999999999999999999999999998 9999987


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....+......                                                 ..+..++..+.+||.
T Consensus       218 ~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~l~~li~  248 (281)
T 3cc6_A          218 LENKDVIGVLEKGDRL-------------------------------------------------PKPDLCPPVLYTLMT  248 (281)
T ss_dssp             SCGGGHHHHHHHTCCC-------------------------------------------------CCCTTCCHHHHHHHH
T ss_pred             CChHHHHHHHhcCCCC-------------------------------------------------CCCCCCCHHHHHHHH
Confidence            6665554444332110                                                 112345778899999


Q ss_pred             HccccCCCCCCCHHHHhCC
Q 015867          373 GLLRYDPSERLTARQALNH  391 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~h  391 (399)
                      +||..||.+|||+.|++++
T Consensus       249 ~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          249 RCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHccCCchhCcCHHHHHHH
Confidence            9999999999999999864

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.4e-43  Score=333.81  Aligned_cols=248  Identities=20%  Similarity=0.273  Sum_probs=198.2

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCC----eEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQ----ERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~----~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ...+|++.+.||+|+||.||+|.+..++    ..||||+++...  .....+..|+.+++.+.      |+||+++++++
T Consensus        42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~  115 (333)
T 1mqb_A           42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS------HHNIIRLEGVI  115 (333)
T ss_dssp             CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCC------CTTBCCEEEEE
T ss_pred             ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCC------CCCCCcEEEEE
Confidence            3568999999999999999999876543    469999997532  23345667888887774      69999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      ...+..++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||+              
T Consensus       116 ~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~--------------  180 (333)
T 1mqb_A          116 SKYKPMMIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV--------------  180 (333)
T ss_dssp             CSSSSEEEEEECCTTEEHHHHHHHTTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE--------------
T ss_pred             ecCCCcEEEEeCCCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEE--------------
Confidence            9999999999999 8899999987532 69999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEAL  289 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~P  289 (399)
                                +.++.+||+|||++.......      ....+|+.|+|||++.+..++.++||||||+++|+|++ |..|
T Consensus       181 ----------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p  250 (333)
T 1mqb_A          181 ----------NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP  250 (333)
T ss_dssp             ----------CTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ----------CCCCcEEECCCCcchhhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence                      446789999999987643321      22346788999999999999999999999999999999 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |...+..+....+......                                                 ..+..++..+.+
T Consensus       251 f~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~l~~  281 (333)
T 1mqb_A          251 YWELSNHEVMKAINDGFRL-------------------------------------------------PTPMDCPSAIYQ  281 (333)
T ss_dssp             TTTCCHHHHHHHHHTTCCC-------------------------------------------------CCCTTCBHHHHH
T ss_pred             cccCCHHHHHHHHHCCCcC-------------------------------------------------CCcccCCHHHHH
Confidence            9887766655544322110                                                 111346778899


Q ss_pred             HHHHccccCCCCCCCHHHHhCC
Q 015867          370 LLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~h  391 (399)
                      ||.+||+.||.+|||+.+++++
T Consensus       282 li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          282 LMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHcCCChhhCcCHHHHHHH
Confidence            9999999999999999998763

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=100.00  E-value=3.7e-44  Score=337.61  Aligned_cols=251  Identities=20%  Similarity=0.298  Sum_probs=204.9

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCe-----EEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQE-----RVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~-----~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      ...++|++.+.||+|+||.||+|.+..+++     .||+|++....  .....+..|+.+++.+.     .||||+++++
T Consensus        43 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~h~~iv~~~~  117 (333)
T 2i1m_A           43 FPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLG-----QHENIVNLLG  117 (333)
T ss_dssp             CCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-----CCTTBCCEEE
T ss_pred             CCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhc-----CCCCeeeEEE
Confidence            345689999999999999999999876654     79999997532  33456778999999884     3699999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNK------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL  202 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll  202 (399)
                      ++...+..++||||+ +++|.+++....            ...+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus       118 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~  197 (333)
T 2i1m_A          118 ACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL  197 (333)
T ss_dssp             EECSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEE
T ss_pred             EEecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEE
Confidence            999999999999999 889999997542            2358999999999999999999999999999999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHH
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVG  277 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  277 (399)
                      +.                        ++.+||+|||++......     .....||+.|+|||++.+..++.++||||||
T Consensus       198 ~~------------------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG  253 (333)
T 2i1m_A          198 TN------------------------GHVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYG  253 (333)
T ss_dssp             EG------------------------GGEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHH
T ss_pred             CC------------------------CCeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHH
Confidence            53                        567999999998753222     2334578899999999999999999999999


Q ss_pred             HHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhh
Q 015867          278 CILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV  356 (399)
Q Consensus       278 ~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  356 (399)
                      +++|+|++ |..||.+.........+.......                                               
T Consensus       254 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~-----------------------------------------------  286 (333)
T 2i1m_A          254 ILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQM-----------------------------------------------  286 (333)
T ss_dssp             HHHHHHTTTSCCSSTTCCSSHHHHHHHHHTCCC-----------------------------------------------
T ss_pred             HHHHHHHcCCCCCCcccchhHHHHHHHhcCCCC-----------------------------------------------
Confidence            99999998 999998766544444433321110                                               


Q ss_pred             hccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       357 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                       ..+..++..+.+||.+||+.||.+|||+.|+++
T Consensus       287 -~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          287 -AQPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -CCCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence             112345678899999999999999999999987

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=3.2e-44  Score=351.83  Aligned_cols=246  Identities=27%  Similarity=0.350  Sum_probs=202.5

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ..++|++.+.||+|+||.||+|.+.. +..||||+++........+..|+++++.+.      ||||+++++++.+ +..
T Consensus       182 ~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~-~~~  253 (452)
T 1fmk_A          182 PRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQLYAVVSE-EPI  253 (452)
T ss_dssp             CGGGEEEEEEEEECSSCEEEEEEETT-TEEEEEEECCTTSSCHHHHHHHHHHHHHCC------CTTBCCEEEEECS-SSC
T ss_pred             ChhHceeeeeecCCCCeEEEEEEECC-CceEEEEEeccCCCCHHHHHHHHHHHHhCC------CCCEeeEEEEEcC-Cce
Confidence            35689999999999999999998864 467999999765555567888999999885      5999999998876 678


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+|||++                   
T Consensus       254 ~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~-------------------  314 (452)
T 1fmk_A          254 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG-------------------  314 (452)
T ss_dssp             EEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC-------------------
T ss_pred             EEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEC-------------------
Confidence            9999999 89999999764333699999999999999999999999999999999999994                   


Q ss_pred             cccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLE  297 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~  297 (399)
                           .++.+||+|||++......    .....+|..|+|||++.+..++.++||||||+++|+|++ |..||.+....+
T Consensus       315 -----~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~  389 (452)
T 1fmk_A          315 -----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE  389 (452)
T ss_dssp             -----GGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHH
T ss_pred             -----CCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHHH
Confidence                 4567999999998764322    123456788999999999999999999999999999999 999999887776


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+......                                                 ..++.++..+.+||.+||+.
T Consensus       390 ~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~cl~~  420 (452)
T 1fmk_A          390 VLDQVERGYRM-------------------------------------------------PCPPECPESLHDLMCQCWRK  420 (452)
T ss_dssp             HHHHHHTTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHccC
Confidence            66555332110                                                 11235678889999999999


Q ss_pred             CCCCCCCHHHHhC
Q 015867          378 DPSERLTARQALN  390 (399)
Q Consensus       378 dP~~R~t~~ell~  390 (399)
                      ||.+|||++++++
T Consensus       421 dP~~Rpt~~~l~~  433 (452)
T 1fmk_A          421 EPEERPTFEYLQA  433 (452)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             ChhhCcCHHHHHH
Confidence            9999999999876

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=1.7e-44  Score=331.31  Aligned_cols=244  Identities=22%  Similarity=0.327  Sum_probs=192.2

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-CCeE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-RNHI  143 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~  143 (399)
                      .++|++.+.||+|+||.||++.+  +++.||||+++... ....+..|+++++.+.      |+||+++++++.. .+..
T Consensus        20 ~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~-~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~~   90 (278)
T 1byg_A           20 MKELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKNDA-TAQAFLAEASVMTQLR------HSNLVQLLGVIVEEKGGL   90 (278)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCCC---HHHHHTHHHHTTCC------CTTBCCEEEEECCC--CC
T ss_pred             hhhceEEeEEecCCCceEEEEEE--cCCEEEEEEecchh-HHHHHHHHHHHHHhCC------CCCEeeEEEEEEcCCCce
Confidence            46899999999999999999976  48899999987533 3455677888777764      6999999998654 4589


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      ++||||+ +++|.+++.......+++..+..++.|++.||+|||++||+||||||+||++                    
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~--------------------  150 (278)
T 1byg_A           91 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV--------------------  150 (278)
T ss_dssp             EEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE--------------------
T ss_pred             EEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEE--------------------
Confidence            9999999 7899999987543348999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAM  301 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~  301 (399)
                          +.++.++|+|||++...........+++.|+|||++.+..++.++||||||+++|+|++ |..||...+..+....
T Consensus       151 ----~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~  226 (278)
T 1byg_A          151 ----SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPR  226 (278)
T ss_dssp             ----CTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHH
T ss_pred             ----eCCCcEEEeeccccccccccccCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence                44678999999998776555556678999999999999999999999999999999998 9999987665444433


Q ss_pred             HHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCC
Q 015867          302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSE  381 (399)
Q Consensus       302 i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  381 (399)
                      +....                                                 ....+..++..+.+||.+||+.||.+
T Consensus       227 ~~~~~-------------------------------------------------~~~~~~~~~~~l~~li~~~l~~~p~~  257 (278)
T 1byg_A          227 VEKGY-------------------------------------------------KMDAPDGCPPAVYEVMKNCWHLDAAM  257 (278)
T ss_dssp             HTTTC-------------------------------------------------CCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred             HhcCC-------------------------------------------------CCCCcccCCHHHHHHHHHHhcCChhh
Confidence            32110                                                 01112456788999999999999999


Q ss_pred             CCCHHHHhC
Q 015867          382 RLTARQALN  390 (399)
Q Consensus       382 R~t~~ell~  390 (399)
                      |||+.++++
T Consensus       258 Rps~~~l~~  266 (278)
T 1byg_A          258 RPSFLQLRE  266 (278)
T ss_dssp             SCCHHHHHH
T ss_pred             CCCHHHHHH
Confidence            999999875

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=100.00  E-value=7.3e-44  Score=330.81  Aligned_cols=265  Identities=23%  Similarity=0.328  Sum_probs=201.7

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEE----EccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECW----DRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~----~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ......+|++.+.||+|+||.||+|+    +..+++.||||++....  .....+..|+++++.+.      |+||++++
T Consensus        16 ~~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~   89 (302)
T 4e5w_A           16 THFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY------HENIVKYK   89 (302)
T ss_dssp             TBCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCC------CTTBCCEE
T ss_pred             hhhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCC------CCCeeeee
Confidence            33445679999999999999999998    56789999999997432  23356777888888875      59999999


Q ss_pred             eeeccC--CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCC
Q 015867          135 NWFDYR--NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       135 ~~~~~~--~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~  211 (399)
                      +++...  +..++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.       
T Consensus        90 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~-------  161 (302)
T 4e5w_A           90 GICTEDGGNGIKLIMEFLPSGSLKEYLPKNKN-KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES-------  161 (302)
T ss_dssp             EEEEC---CCEEEEEECCTTCBHHHHHHHHTT-TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE-------
T ss_pred             eEEecCCCceEEEEEEeCCCCcHHHHHHhccc-cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcC-------
Confidence            998876  6789999999 8899999966543 5999999999999999999999999999999999999954       


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  285 (399)
                                       ++.++|+|||++......      .....||..|+|||++.+..++.++||||||+++|+|++
T Consensus       162 -----------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~  224 (302)
T 4e5w_A          162 -----------------EHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT  224 (302)
T ss_dssp             -----------------TTEEEECCCTTCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             -----------------CCCEEECcccccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHH
Confidence                             567999999998764432      234568888999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |..|+....     ..+.....+.......                        .......     ........++.++.
T Consensus       225 g~~p~~~~~-----~~~~~~~~~~~~~~~~------------------------~~~~~~~-----~~~~~~~~~~~~~~  270 (302)
T 4e5w_A          225 YCDSDSSPM-----ALFLKMIGPTHGQMTV------------------------TRLVNTL-----KEGKRLPCPPNCPD  270 (302)
T ss_dssp             TTCGGGSHH-----HHHHHHHCSCCGGGHH------------------------HHHHHHH-----HTTCCCCCCTTCCH
T ss_pred             ccCCCcchh-----hHHhhccCCcccccCH------------------------HHHHHHH-----hccCCCCCCCCCCH
Confidence            999874321     1111111111111000                        0000000     00111223456788


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ++.+||.+||+.||.+|||+.++++
T Consensus       271 ~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          271 EVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            9999999999999999999999986

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=2.3e-44  Score=344.24  Aligned_cols=246  Identities=21%  Similarity=0.301  Sum_probs=193.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc---cCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR---QTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~---~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .++|++.+.||+|+||.||+|++.   .++..||||+++..  ......+..|+.+++.+.      |+||+++++++.+
T Consensus        44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~niv~~~~~~~~  117 (373)
T 2qol_A           44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFD------HPNIIRLEGVVTK  117 (373)
T ss_dssp             GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCC------CTTBCCEEEEECS
T ss_pred             HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEee
Confidence            457999999999999999999876   45778999998753  233455677877777764      6999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..++||||+ +++|.+++...+. .+++..+..++.||+.||+|||++||+||||||+|||+                
T Consensus       118 ~~~~~lv~e~~~~~sL~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll----------------  180 (373)
T 2qol_A          118 SKPVMIVTEYMENGSLDSFLRKHDA-QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILI----------------  180 (373)
T ss_dssp             SSSCEEEEECCTTCBHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----------------
T ss_pred             CCceEEEEeCCCCCcHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEE----------------
Confidence            99999999999 9999999986543 59999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                              +.++.+||+|||++.......      ....+|+.|+|||++.+..++.++||||||+++|||++ |..||.
T Consensus       181 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~  252 (373)
T 2qol_A          181 --------NSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYW  252 (373)
T ss_dssp             --------CTTCCEEECCC----------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTT
T ss_pred             --------cCCCCEEECcCccccccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCC
Confidence                    456789999999987643321      12235778999999999999999999999999999998 999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+......                                                 ..+..++..+.+||
T Consensus       253 ~~~~~~~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l~~li  283 (373)
T 2qol_A          253 EMSNQDVIKAVDEGYRL-------------------------------------------------PPPMDCPAALYQLM  283 (373)
T ss_dssp             TCCHHHHHHHHHTTEEC-------------------------------------------------CCCTTCBHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCC-------------------------------------------------CCCccccHHHHHHH
Confidence            87766655544322110                                                 11234677889999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||+.||.+|||+.++++
T Consensus       284 ~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          284 LDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHhCcChhhCcCHHHHHH
Confidence            9999999999999999875

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.7e-43  Score=329.53  Aligned_cols=245  Identities=27%  Similarity=0.376  Sum_probs=189.9

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .++|++.+.||+|+||.||+|.+.  ++.||||++... .....+..|+++++.+.      ||||+++++++.+  ..+
T Consensus         7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-~~~~~~~~E~~~l~~l~------hp~iv~~~~~~~~--~~~   75 (307)
T 2eva_A            7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE-SERKAFIVELRQLSRVN------HPNIVKLYGACLN--PVC   75 (307)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST-THHHHHHHHHHHHHHCC------CTTBCCEEEBCTT--TTE
T ss_pred             HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh-hHHHHHHHHHHHHhcCC------CCCcCeEEEEEcC--CcE
Confidence            357999999999999999999764  788999998653 34466778888888875      5999999998774  489


Q ss_pred             EEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          145 IVFEKL-GPSLFDFLKRNKY-CPFPVDLVREFGRQLLESVAYMHD---LRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~---~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +||||+ +++|.+++..... ..++...+..++.||+.||+|||+   +||+||||||+|||++.+              
T Consensus        76 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~--------------  141 (307)
T 2eva_A           76 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG--------------  141 (307)
T ss_dssp             EEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETT--------------
T ss_pred             EEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCC--------------
Confidence            999999 8999999986542 247889999999999999999999   899999999999999532              


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                               +..+||+|||++...........||+.|+|||++.+..++.++||||||+++|+|++|+.||.........
T Consensus       142 ---------~~~~kl~Dfg~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~  212 (307)
T 2eva_A          142 ---------GTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFR  212 (307)
T ss_dssp             ---------TTEEEECCCCC------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHH
T ss_pred             ---------CCEEEEcccccccccccccccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHH
Confidence                     23489999999876655555667999999999999999999999999999999999999999764332211


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      .......+..                                               ......++..+.+||.+||+.||
T Consensus       213 ~~~~~~~~~~-----------------------------------------------~~~~~~~~~~l~~li~~~l~~dp  245 (307)
T 2eva_A          213 IMWAVHNGTR-----------------------------------------------PPLIKNLPKPIESLMTRCWSKDP  245 (307)
T ss_dssp             HHHHHHTTCC-----------------------------------------------CCCBTTCCHHHHHHHHHHTCSSG
T ss_pred             HHHHHhcCCC-----------------------------------------------CCcccccCHHHHHHHHHHhcCCh
Confidence            1110000000                                               11224567788999999999999


Q ss_pred             CCCCCHHHHhC
Q 015867          380 SERLTARQALN  390 (399)
Q Consensus       380 ~~R~t~~ell~  390 (399)
                      .+|||+.++++
T Consensus       246 ~~Rps~~ell~  256 (307)
T 2eva_A          246 SQRPSMEEIVK  256 (307)
T ss_dssp             GGSCCHHHHHH
T ss_pred             hhCcCHHHHHH
Confidence            99999999987

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=100.00  E-value=1.6e-45  Score=356.91  Aligned_cols=253  Identities=18%  Similarity=0.183  Sum_probs=192.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCC----------CCCccee
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDK----------GGSSHCV  131 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~----------~~~~~iv  131 (399)
                      .+|.+.+.||+|+||.||+|.+..+|+.||||+++...    .....+..|+.+++.+.+...          .....++
T Consensus        78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  157 (413)
T 3dzo_A           78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV  157 (413)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred             eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence            35899999999999999999999999999999987322    223556778888777765211          0000111


Q ss_pred             ee------ceeecc-----CCeEEEEEccCCCCHHHHHHh-----cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCC
Q 015867          132 QI------RNWFDY-----RNHICIVFEKLGPSLFDFLKR-----NKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDL  195 (399)
Q Consensus       132 ~~------~~~~~~-----~~~~~lv~e~~~~~L~~~l~~-----~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Di  195 (399)
                      .+      ..++..     ....+++|++++++|.++++.     .....+++..+..++.||+.||+|||++||+||||
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDi  237 (413)
T 3dzo_A          158 KDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYL  237 (413)
T ss_dssp             ECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCC
T ss_pred             ccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCc
Confidence            11      111111     235788999889999999852     22234778889999999999999999999999999


Q ss_pred             CCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhh----------hCC
Q 015867          196 KPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVI----------LGL  265 (399)
Q Consensus       196 kp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~----------~~~  265 (399)
                      ||+||||+                        .++.+||+|||++..........+| +.|+|||++          .+.
T Consensus       238 Kp~NILl~------------------------~~~~~kL~DFG~a~~~~~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~  292 (413)
T 3dzo_A          238 RPVDIVLD------------------------QRGGVFLTGFEHLVRDGASAVSPIG-RGFAPPETTAERMLPFGQHHPT  292 (413)
T ss_dssp             CGGGEEEC------------------------TTCCEEECCGGGCEETTEEECCCCC-TTTCCHHHHHHHTSTTGGGCCE
T ss_pred             ccceEEEe------------------------cCCeEEEEeccceeecCCccccCCC-CceeCchhhhccccccccccCc
Confidence            99999994                        4667999999998876666667788 999999999          455


Q ss_pred             CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHH
Q 015867          266 GWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKA  345 (399)
Q Consensus       266 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  345 (399)
                      .++.++|||||||++|+|++|+.||...+..+....+                                           
T Consensus       293 ~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~-------------------------------------------  329 (413)
T 3dzo_A          293 LMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI-------------------------------------------  329 (413)
T ss_dssp             EECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGG-------------------------------------------
T ss_pred             CCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHH-------------------------------------------
Confidence            6888999999999999999999999765431110000                                           


Q ss_pred             HHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       346 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                                 ......++.++.+||.+||+.||.+|||+.++++||||+++
T Consensus       330 -----------~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          330 -----------FRSCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             -----------GSSCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             -----------HhhcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence                       00112457789999999999999999999999999999875

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=1.2e-43  Score=331.21  Aligned_cols=251  Identities=17%  Similarity=0.215  Sum_probs=194.7

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEcc---CCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQ---TQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~---~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      ....++|.+.+.||+|+||.||+|.+..   +++.||||+++..   ......+..|+.+++.+.      ||||+++++
T Consensus        30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~iv~~~~  103 (313)
T 3brb_A           30 VIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFS------HPNVIRLLG  103 (313)
T ss_dssp             BCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCC------CTTBCCCCE
T ss_pred             ccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCC------CCCeeeeeE
Confidence            3345689999999999999999998754   5668999998643   223345667888877774      699999999


Q ss_pred             eeccCC-----eEEEEEccC-CCCHHHHHHhc----CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeec
Q 015867          136 WFDYRN-----HICIVFEKL-GPSLFDFLKRN----KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSS  205 (399)
Q Consensus       136 ~~~~~~-----~~~lv~e~~-~~~L~~~l~~~----~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~  205 (399)
                      ++...+     ..++||||+ +++|.+++...    ....+++..+..++.||+.||.|||++||+||||||+|||+   
T Consensus       104 ~~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli---  180 (313)
T 3brb_A          104 VCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML---  180 (313)
T ss_dssp             EEEC-------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEE---
T ss_pred             EEeeccccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE---
Confidence            987654     459999999 89999999542    23469999999999999999999999999999999999999   


Q ss_pred             ccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHH
Q 015867          206 EFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  280 (399)
Q Consensus       206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  280 (399)
                                           +.++.+||+|||++......     .....+++.|+|||++.+..++.++||||||+++
T Consensus       181 ---------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il  239 (313)
T 3brb_A          181 ---------------------RDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTM  239 (313)
T ss_dssp             ---------------------CTTSCEEECSCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHH
T ss_pred             ---------------------cCCCcEEEeecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHH
Confidence                                 34667999999998654322     2334578899999999999999999999999999


Q ss_pred             HHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhcc
Q 015867          281 VELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH  359 (399)
Q Consensus       281 ~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  359 (399)
                      |+|++ |..||.+.+..+....+.....                                                 ...
T Consensus       240 ~el~~~g~~p~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~  270 (313)
T 3brb_A          240 WEIATRGMTPYPGVQNHEMYDYLLHGHR-------------------------------------------------LKQ  270 (313)
T ss_dssp             HHHHTTSCCSSTTCCGGGHHHHHHTTCC-------------------------------------------------CCC
T ss_pred             HHHHhcCCCCCccCCHHHHHHHHHcCCC-------------------------------------------------CCC
Confidence            99999 9999988776555444332110                                                 011


Q ss_pred             chhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          360 VDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       360 ~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      +..++.++.+||.+||..||.+|||+.+++++
T Consensus       271 ~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          271 PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            24567789999999999999999999999874

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=100.00  E-value=1.2e-43  Score=327.88  Aligned_cols=244  Identities=22%  Similarity=0.309  Sum_probs=199.2

Q ss_pred             CCCEEEEe-eeccccceEEEEEE--EccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           65 TPRYKILS-KMGEGTFGRVLECW--DRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        65 ~~~y~~~~-~lG~G~~g~V~~~~--~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      .++|++.+ .||+|+||.||+|.  ...+++.||||+++...   .....+..|+++++.+.      |+||+++++++ 
T Consensus        15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~-   87 (291)
T 1xbb_A           15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD------NPYIVRMIGIC-   87 (291)
T ss_dssp             GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC------CTTBCCEEEEE-
T ss_pred             chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCC------CCCEEEEEEEE-
Confidence            35799998 99999999999995  45678999999997532   22456777888888774      69999999998 


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      ..+..++||||+ +++|.+++...+  .+++..+..++.||+.||+|||++||+||||||+|||++.             
T Consensus        88 ~~~~~~lv~e~~~~~~L~~~l~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~-------------  152 (291)
T 1xbb_A           88 EAESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT-------------  152 (291)
T ss_dssp             ESSSEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE-------------
T ss_pred             CCCCcEEEEEeCCCCCHHHHHHhCc--CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeC-------------
Confidence            567889999999 899999998865  5999999999999999999999999999999999999954             


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALF  290 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf  290 (399)
                                 ++.++|+|||++.......      ....||+.|+|||++.+..++.++||||||+++|+|++ |..||
T Consensus       153 -----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~  221 (291)
T 1xbb_A          153 -----------QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPY  221 (291)
T ss_dssp             -----------TTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSS
T ss_pred             -----------CCcEEEccCCcceeeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCC
Confidence                       5679999999987643322      22346788999999999899999999999999999999 99999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .+.+..+....+.....                                                 ...+..++.++.+|
T Consensus       222 ~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~l~~l  252 (291)
T 1xbb_A          222 RGMKGSEVTAMLEKGER-------------------------------------------------MGCPAGCPREMYDL  252 (291)
T ss_dssp             TTCCHHHHHHHHHTTCC-------------------------------------------------CCCCTTCCHHHHHH
T ss_pred             CCCCHHHHHHHHHcCCC-------------------------------------------------CCCCCCCCHHHHHH
Confidence            88776655544432110                                                 01123567889999


Q ss_pred             HHHccccCCCCCCCHHHHhC
Q 015867          371 LHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~  390 (399)
                      |.+||+.||.+|||+.++++
T Consensus       253 i~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          253 MNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             HHHHTCSSTTTSCCHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999875

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=100.00  E-value=2.1e-44  Score=337.64  Aligned_cols=268  Identities=20%  Similarity=0.245  Sum_probs=204.2

Q ss_pred             ccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           59 NLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        59 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .......++|++.+.||+|+||.||+|.+ .+++.||||++.... .....+..|+++++.+      .||||+++++++
T Consensus        32 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~~iv~~~~~~  104 (321)
T 2qkw_B           32 VDLEEATNNFDHKFLIGHGVFGKVYKGVL-RDGAKVALKRRTPESSQGIEEFETEIETLSFC------RHPHLVSLIGFC  104 (321)
T ss_dssp             SCCCCCCCCCSCCCCSCBCSSSEEEEEEC-TTCCEEEEEECCSCCSSHHHHHHHHHHGGGSC------CCTTBCCEEEEC
T ss_pred             HHHHHHHhccCccceeecCCCeeEEEEEE-CCCCEEEEEEecccChHHHHHHHHHHHHHHhC------CCCCEeeEEEEE
Confidence            33455678899999999999999999986 468899999886532 2234556676666655      469999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKY--CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      ...+..++||||+ +++|.+++.....  ..+++..+..++.||+.||+|||++||+||||||+|||+            
T Consensus       105 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~------------  172 (321)
T 2qkw_B          105 DERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILL------------  172 (321)
T ss_dssp             CCTTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEE------------
T ss_pred             cCCCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEE------------
Confidence            9999999999999 8999999865432  258999999999999999999999999999999999999            


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                  +.++.+||+|||++.....     ......||+.|+|||++.+..++.++||||||+++|+|++|+.|
T Consensus       173 ------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p  240 (321)
T 2qkw_B          173 ------------DENFVPKITDFGISKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSA  240 (321)
T ss_dssp             ------------CTTCCEEECCCTTCEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTT
T ss_pred             ------------CCCCCEEEeecccccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCc
Confidence                        4567899999999865322     12345689999999999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhccc-ccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      |......+....+..        ........ ......                          ........+.++..+.
T Consensus       241 ~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~l~  286 (321)
T 2qkw_B          241 IVQSLPREMVNLAEW--------AVESHNNGQLEQIVD--------------------------PNLADKIRPESLRKFG  286 (321)
T ss_dssp             CSCSSSSSCCCHHHH--------THHHHTTTCCCSSSS--------------------------SSCTTCSCHHHHHHHH
T ss_pred             ccccCcHHHHHHHHH--------hhhccccccHHHhcC--------------------------hhhccccCHHHHHHHH
Confidence            976443221110000        00000000 000000                          0011123356778899


Q ss_pred             HHHHHccccCCCCCCCHHHHhCC
Q 015867          369 DLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      +|+.+||+.||.+|||+.|+++|
T Consensus       287 ~li~~~l~~dP~~Rps~~ell~~  309 (321)
T 2qkw_B          287 DTAVKCLALSSEDRPSMGDVLWK  309 (321)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHHHHcCCCcccCcCHHHHHHH
Confidence            99999999999999999999875

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=100.00  E-value=8e-44  Score=339.72  Aligned_cols=211  Identities=19%  Similarity=0.261  Sum_probs=171.6

Q ss_pred             cCCCEEEEeeeccccceEEEEEE-----EccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           64 LTPRYKILSKMGEGTFGRVLECW-----DRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~-----~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..++|.+.+.||+|+||.||+|.     +..+++.||||++...  ....+..|.++++.+.+   ..|+||+.+++++.
T Consensus        63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~e~~~~~~l~~---~~~~~iv~~~~~~~  137 (365)
T 3e7e_A           63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA--NPWEFYIGTQLMERLKP---SMQHMFMKFYSAHL  137 (365)
T ss_dssp             SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC--CHHHHHHHHHHHHHSCG---GGGGGBCCEEEEEE
T ss_pred             CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC--ChhHHHHHHHHHHHhhh---hhhhhhhhhheeee
Confidence            35689999999999999999994     6678999999999753  34567778888887763   34789999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRN---KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~---~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      ..+..|+||||+ +++|.+++...   ....+++..+..|+.||+.||+|||++|||||||||+|||++.+..-.     
T Consensus       138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~-----  212 (365)
T 3e7e_A          138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQ-----  212 (365)
T ss_dssp             CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC-----
T ss_pred             cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCc-----
Confidence            999999999999 99999999752   233699999999999999999999999999999999999995421000     


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCC-----CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-----QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                              ....+.++.+||+|||++....     ......+||+.|+|||++.+..++.++|||||||++|+|++|+.|
T Consensus       213 --------~~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~p  284 (365)
T 3e7e_A          213 --------DDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYM  284 (365)
T ss_dssp             --------------CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCC
T ss_pred             --------cccccccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCc
Confidence                    0001237889999999985421     223456799999999999999999999999999999999999999


Q ss_pred             CCC
Q 015867          290 FQT  292 (399)
Q Consensus       290 f~~  292 (399)
                      |..
T Consensus       285 f~~  287 (365)
T 3e7e_A          285 KVK  287 (365)
T ss_dssp             CEE
T ss_pred             ccc
Confidence            954

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=1.6e-45  Score=370.68  Aligned_cols=281  Identities=25%  Similarity=0.332  Sum_probs=208.4

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc---
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY---  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~---  139 (399)
                      .++|++.+.||+|+||.||+|.+..+|+.||||+++..  ......+..|+++++.+.      ||||+++++++..   
T Consensus        13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~------HpnIV~l~~v~~~~~~   86 (676)
T 3qa8_A           13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLN------HPNVVSAREVPDGLQK   86 (676)
T ss_dssp             ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCC------BTTBCCEEECCTTTCC
T ss_pred             CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCC------CCCCCceeeeeccccc
Confidence            46899999999999999999999999999999998642  333456778999998885      5999999988765   


Q ss_pred             ---CCeEEEEEccC-CCCHHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          140 ---RNHICIVFEKL-GPSLFDFLKRNKY-CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       140 ---~~~~~lv~e~~-~~~L~~~l~~~~~-~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                         .+..++||||+ |++|.+++..... ..+++..++.++.||+.||+|||+.||+||||||+|||++.++        
T Consensus        87 ~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g--------  158 (676)
T 3qa8_A           87 LAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP--------  158 (676)
T ss_dssp             CCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCS--------
T ss_pred             ccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCC--------
Confidence               67889999999 9999999987442 3589999999999999999999999999999999999996543        


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                   ....++|+|||++.....  ......||+.|+|||++.+..++.++||||||+++|+|++|..||..
T Consensus       159 -------------~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~  225 (676)
T 3qa8_A          159 -------------QRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP  225 (676)
T ss_dssp             -------------SSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             -------------CceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence                         344589999999876433  23456899999999999999999999999999999999999999976


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .........      ..........    ...-.......|+..                ........+.++..+.+||.
T Consensus       226 ~~~~~~~~~------~i~~~~~~~~----~~~~~l~g~~~~~~~----------------lp~p~~l~~~ls~~L~dLI~  279 (676)
T 3qa8_A          226 NWQPVQWHG------KVREKSNEHI----VVYDDLTGAVKFSSV----------------LPTPNHLSGILAGKLERWLQ  279 (676)
T ss_dssp             SCHHHHSST------TCC------C----CSCCCCSSSCCCCSS----------------SCCSCCCCGGGHHHHHHHHH
T ss_pred             ccchhhhhh------hhhcccchhh----hhhhhhccccccccc----------------cCCchhhchhhhHHHHHHHH
Confidence            543221100      0000000000    000000001111110                00011233457889999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +||..||.+|||+.|+++||||+.++
T Consensus       280 ~mL~~DP~kRPTa~elL~hp~F~~l~  305 (676)
T 3qa8_A          280 CMLMWHQRQRGTDPQNPNVGCFQALD  305 (676)
T ss_dssp             HHSCSSCC---CCTTCCCCTTHHHHH
T ss_pred             HHccCCHhhCcCHHHHhcCHHHHHHH
Confidence            99999999999999999999998753

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=2.6e-43  Score=326.50  Aligned_cols=245  Identities=17%  Similarity=0.237  Sum_probs=196.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccC---CeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee-cc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQT---QERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF-DY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~-~~  139 (399)
                      .+|++.+.||+|+||.||+|.+..+   ...||+|.+....  .....+..|+.+++.+.      |+||+++++++ ..
T Consensus        25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~   98 (298)
T 3f66_A           25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS------HPNVLSLLGICLRS   98 (298)
T ss_dssp             EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCC------CTTBCCCCEEECCS
T ss_pred             eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCC------CCCEeeeeeEEEcC
Confidence            4699999999999999999986543   3468999986432  23455777888888775      69999999984 55


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ++..++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||+                
T Consensus        99 ~~~~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~----------------  161 (298)
T 3f66_A           99 EGSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCML----------------  161 (298)
T ss_dssp             SSCCEEEEECCTTCBHHHHHHCTTC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE----------------
T ss_pred             CCceEEEEeCCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE----------------
Confidence            67899999999 8899999976443 68999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCC-------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQ-------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALF  290 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf  290 (399)
                              +.++.+||+|||++.....       ......||+.|+|||++.+..++.++||||||+++|+|++ |.+||
T Consensus       162 --------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~  233 (298)
T 3f66_A          162 --------DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY  233 (298)
T ss_dssp             --------CTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSS
T ss_pred             --------CCCCCEEECcccccccccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCC
Confidence                    4567899999999865322       1234467889999999999999999999999999999999 77788


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      ...+..+....+......                                                 ..+..++..+.+|
T Consensus       234 ~~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~l~~l  264 (298)
T 3f66_A          234 PDVNTFDITVYLLQGRRL-------------------------------------------------LQPEYCPDPLYEV  264 (298)
T ss_dssp             TTSCTTTHHHHHHTTCCC-------------------------------------------------CCCTTCCHHHHHH
T ss_pred             ccCCHHHHHHHHhcCCCC-------------------------------------------------CCCccCCHHHHHH
Confidence            776655544444322111                                                 1123456788999


Q ss_pred             HHHccccCCCCCCCHHHHhC
Q 015867          371 LHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~  390 (399)
                      |.+||+.||.+|||+.|+++
T Consensus       265 i~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          265 MLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999876

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-43  Score=324.55  Aligned_cols=244  Identities=19%  Similarity=0.266  Sum_probs=195.8

Q ss_pred             CEEEEeeeccccceEEEEEEEccCC---eEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQ---ERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~---~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .|.+.+.||+|+||.||+|.+..++   ..||+|++....  .....+..|+.+++.+.      |+||+++++++.+.+
T Consensus        22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~   95 (298)
T 3pls_A           22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLN------HPNVLALIGIMLPPE   95 (298)
T ss_dssp             EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCC------CTTBCCCCEEECCSS
T ss_pred             EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCC------CCCeeeEEEEEecCC
Confidence            5888899999999999999865544   379999986432  23355677888888774      699999999998765


Q ss_pred             e-EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          142 H-ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       142 ~-~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      . .++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+|||+                 
T Consensus        96 ~~~~~v~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili-----------------  157 (298)
T 3pls_A           96 GLPHVLLPYMCHGDLLQFIRSPQ-RNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCML-----------------  157 (298)
T ss_dssp             SCCEEEECCCTTCBHHHHHHCTT-CCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE-----------------
T ss_pred             CCcEEEEecccCCCHHHHHhccc-cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEE-----------------
Confidence            5 49999999 999999997643 368999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCC-------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQ-------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                             +.++.+||+|||++.....       ......||+.|+|||.+.+..++.++||||||+++|+|++ |.+||.
T Consensus       158 -------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~  230 (298)
T 3pls_A          158 -------DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR  230 (298)
T ss_dssp             -------CTTCCEEECCTTSSCTTTTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTT
T ss_pred             -------cCCCcEEeCcCCCcccccCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCc
Confidence                   4467899999999865322       2234567899999999999999999999999999999999 555566


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+......                                                 ..+..++..+.+||
T Consensus       231 ~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~l~~li  261 (298)
T 3pls_A          231 HIDPFDLTHFLAQGRRL-------------------------------------------------PQPEYCPDSLYQVM  261 (298)
T ss_dssp             TSCGGGHHHHHHTTCCC-------------------------------------------------CCCTTCCHHHHHHH
T ss_pred             cCCHHHHHHHhhcCCCC-------------------------------------------------CCCccchHHHHHHH
Confidence            55554444433322110                                                 11234577889999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||+.||.+|||+.++++
T Consensus       262 ~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          262 QQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHccCChhhCcCHHHHHH
Confidence            9999999999999999876

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=100.00  E-value=4.8e-44  Score=336.07  Aligned_cols=261  Identities=23%  Similarity=0.277  Sum_probs=200.8

Q ss_pred             CCEEEEeeeccccceEEEEEE----EccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec--
Q 015867           66 PRYKILSKMGEGTFGRVLECW----DRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD--  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~--  138 (399)
                      ++|++.+.||+|+||.||+|+    +..+++.||||++.... .....+..|+++++.+.      |+||+++++++.  
T Consensus        23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~   96 (327)
T 3lxl_A           23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALH------SDFIVKYRGVSYGP   96 (327)
T ss_dssp             GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCC------CTTBCCEEEEEECS
T ss_pred             hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcC------CCceeEEEEEEecC
Confidence            579999999999999999998    56789999999997543 33455778888888874      599999999875  


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +.+..++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.             
T Consensus        97 ~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~-------------  162 (327)
T 3lxl_A           97 GRQSLRLVMEYLPSGCLRDFLQRHRA-RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES-------------  162 (327)
T ss_dssp             SSCEEEEEEECCTTCBHHHHHHHHGG-GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE-------------
T ss_pred             CCceEEEEEeecCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECC-------------
Confidence            456899999999 9999999987432 5999999999999999999999999999999999999954             


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                 ++.+||+|||++.......      ....||+.|+|||++.+..++.++||||||+++|+|++|..||.
T Consensus       163 -----------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~  231 (327)
T 3lxl_A          163 -----------EAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSC  231 (327)
T ss_dssp             -----------TTEEEECCGGGCEECCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGG
T ss_pred             -----------CCCEEEcccccceecccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCc
Confidence                       5679999999987643322      23457888999999999999999999999999999999999996


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ...........  .....+..                           .......     ........++.++.++.+||
T Consensus       232 ~~~~~~~~~~~--~~~~~~~~---------------------------~~~~~~~-----~~~~~~~~~~~~~~~l~~li  277 (327)
T 3lxl_A          232 SPSAEFLRMMG--CERDVPAL---------------------------SRLLELL-----EEGQRLPAPPACPAEVHELM  277 (327)
T ss_dssp             SHHHHHHHHCC------CCHH---------------------------HHHHHHH-----HTTCCCCCCTTCCHHHHHHH
T ss_pred             cccchhhhhcc--cccccccH---------------------------HHHHHHh-----hcccCCCCCCcccHHHHHHH
Confidence            53321111000  00000000                           0000000     00111223456788999999


Q ss_pred             HHccccCCCCCCCHHHHhCC
Q 015867          372 HGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~h  391 (399)
                      .+||+.||.+|||+.|++++
T Consensus       278 ~~~l~~dP~~Rps~~ell~~  297 (327)
T 3lxl_A          278 KLCWAPSPQDRPSFSALGPQ  297 (327)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999999753

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=100.00  E-value=9.2e-45  Score=340.71  Aligned_cols=275  Identities=18%  Similarity=0.204  Sum_probs=206.3

Q ss_pred             ceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh--hhHHHHHHHHHHHHhhhcCCCCCcceee
Q 015867           55 HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--YRDAAMIEIDVLQHLAKNDKGGSSHCVQ  132 (399)
Q Consensus        55 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~~~~~~~~~~iv~  132 (399)
                      .+.+.......++|++.+.||+|+||.||+|.+ .+++.||||++.....  ....+..|+++++.+      .|+||++
T Consensus        19 ~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~-~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~   91 (326)
T 3uim_A           19 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKEERTQGGELQFQTEVEMISMA------VHRNLLR   91 (326)
T ss_dssp             ECCTHHHHTTTTSSCSTTEEECCSSSEEEEECC-SSSCCEEEEECCC-----CCCHHHHHHHGGGTC------CCTTBCC
T ss_pred             eecHHHHHHHhhccccceeEecCCCcEEEEEEe-cCCCEEEEEEeccccCchHHHHHHHHHHHHHhc------cCCCccc
Confidence            344455556678999999999999999999974 4688999999865322  122456666666555      4699999


Q ss_pred             eceeeccCCeEEEEEccC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCCCcEEEeecc
Q 015867          133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY--CPFPVDLVREFGRQLLESVAYMHDL---RLIHTDLKPENILLVSSE  206 (399)
Q Consensus       133 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---givH~Dikp~NIll~~~~  206 (399)
                      +++++.+.+..++||||+ +++|.+++.....  ..+++..+..++.||+.||+|||++   ||+||||||+|||+    
T Consensus        92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~----  167 (326)
T 3uim_A           92 LRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILL----  167 (326)
T ss_dssp             CCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEE----
T ss_pred             eEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEE----
Confidence            999999999999999999 8899999987542  2499999999999999999999999   99999999999999    


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHH
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE  282 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~e  282 (399)
                                          +.++.+||+|||++......    .....||+.|+|||++.+..++.++||||||+++|+
T Consensus       168 --------------------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~  227 (326)
T 3uim_A          168 --------------------DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLE  227 (326)
T ss_dssp             --------------------CTTCCEEECCCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHH
T ss_pred             --------------------CCCCCEEeccCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHH
Confidence                                45678999999998754322    234569999999999999899999999999999999


Q ss_pred             HHhCCCCCCCCC-----cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhh
Q 015867          283 LCTGEALFQTHE-----NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS  357 (399)
Q Consensus       283 ll~g~~Pf~~~~-----~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  357 (399)
                      |++|..||....     .......+...                   ....   .....              .......
T Consensus       228 l~~g~~pf~~~~~~~~~~~~~~~~~~~~-------------------~~~~---~~~~~--------------~~~~~~~  271 (326)
T 3uim_A          228 LITGQRAFDLARLANDDDVMLLDWVKGL-------------------LKEK---KLEAL--------------VDVDLQG  271 (326)
T ss_dssp             HHHCCCSBCHHHHTTTSCSBHHHHHTTT-------------------TSSC---CSTTS--------------SCTTCTT
T ss_pred             HHhCCCcccccccccccchhHHHHHHHH-------------------hhch---hhhhh--------------cChhhcc
Confidence            999999995210     00000000000                   0000   00000              0001112


Q ss_pred             ccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       358 ~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ...+..+..+.+|+.+||+.||.+|||+.|+++|-.-.+
T Consensus       272 ~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~  310 (326)
T 3uim_A          272 NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDG  310 (326)
T ss_dssp             SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSS
T ss_pred             ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcc
Confidence            234566788999999999999999999999998754333

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=100.00  E-value=1.4e-43  Score=354.19  Aligned_cols=247  Identities=27%  Similarity=0.345  Sum_probs=206.7

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ...++|++.+.||+|+||.||+|.+.. +..||||+++........+..|+++++.+.      |+||+++++++.+ +.
T Consensus       264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~E~~~l~~l~------hpniv~~~~~~~~-~~  335 (535)
T 2h8h_A          264 IPRESLRLEVKLGQGCFGEVWMGTWNG-TTRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQLYAVVSE-EP  335 (535)
T ss_dssp             CCGGGEEEEEEEEECSSEEEEEEEETT-TEEEEEEEECTTSSCHHHHHHHHHHHHHCC------CTTBCCEEEEECS-SS
T ss_pred             cchhhhhhheecccCCCeEEEEEEECC-CceEEEEEeCCCCCCHHHHHHHHHHHHhCC------CCCEeeEEEEEee-cc
Confidence            345689999999999999999998864 467999999865555567888999999985      5999999998876 67


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .||||||+ +++|.+++.......+++..+..++.||+.||+|||++||+||||||+||||+                  
T Consensus       336 ~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~------------------  397 (535)
T 2h8h_A          336 IYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG------------------  397 (535)
T ss_dssp             CEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC------------------
T ss_pred             ceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc------------------
Confidence            89999999 88999999764333599999999999999999999999999999999999994                  


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENL  296 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~  296 (399)
                            .++.+||+|||++......    .....++..|+|||++.+..++.++|||||||++|||++ |..||.+....
T Consensus       398 ------~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~  471 (535)
T 2h8h_A          398 ------ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR  471 (535)
T ss_dssp             ------GGGCEEECCTTSTTTCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHH
T ss_pred             ------CCCcEEEcccccceecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence                  4567999999998764432    123456788999999999999999999999999999999 99999988777


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +.+..+......                                                 ..+..++..+.+||.+||+
T Consensus       472 ~~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~cl~  502 (535)
T 2h8h_A          472 EVLDQVERGYRM-------------------------------------------------PCPPECPESLHDLMCQCWR  502 (535)
T ss_dssp             HHHHHHHTTCCC-------------------------------------------------CCCTTCCHHHHHHHHHHTC
T ss_pred             HHHHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHHHcC
Confidence            666555332110                                                 1123567888999999999


Q ss_pred             cCCCCCCCHHHHhC
Q 015867          377 YDPSERLTARQALN  390 (399)
Q Consensus       377 ~dP~~R~t~~ell~  390 (399)
                      .||.+|||+.+|++
T Consensus       503 ~dP~~RPt~~~l~~  516 (535)
T 2h8h_A          503 KEPEERPTFEYLQA  516 (535)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhHCcCHHHHHH
Confidence            99999999999886

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=100.00  E-value=2.8e-44  Score=338.81  Aligned_cols=271  Identities=22%  Similarity=0.233  Sum_probs=189.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec-----c
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD-----Y  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~-----~  139 (399)
                      .++|++.+.||+|+||.||+|..  +++.||||++.....  ..+..|.+++.    .....|+||+++++.+.     .
T Consensus        12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~--~~~~~e~~~~~----~~~~~h~~i~~~~~~~~~~~~~~   83 (336)
T 3g2f_A           12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR--QNFINEKNIYR----VPLMEHDNIARFIVGDERVTADG   83 (336)
T ss_dssp             TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH--HHHHHHHHHHT----STTCCCTTBCCEEEEEEEECTTS
T ss_pred             hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch--hhHHHHHHHHH----HHhccCcchhhheecccccccCC
Confidence            46799999999999999999965  688999999975432  33333433332    23346899999987443     2


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---------CccccCCCCCcEEEeeccccc
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL---------RLIHTDLKPENILLVSSEFIK  209 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---------givH~Dikp~NIll~~~~~~~  209 (399)
                      ...+++||||+ +++|.+++....   .++..+..++.||+.||.|||+.         ||+||||||+|||+       
T Consensus        84 ~~~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill-------  153 (336)
T 3g2f_A           84 RMEYLLVMEYYPNGSLXKYLSLHT---SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLV-------  153 (336)
T ss_dssp             CEEEEEEECCCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEE-------
T ss_pred             CceEEEEEecCCCCcHHHHHhhcc---cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEE-------
Confidence            44789999999 999999998765   68999999999999999999999         99999999999999       


Q ss_pred             CCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----------CCcccccCCCccchhhhhC-------CCCCCcc
Q 015867          210 LPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----------NHSSIVSTRHYRAPEVILG-------LGWSYPC  271 (399)
Q Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----------~~~~~~gt~~y~aPE~~~~-------~~~~~~~  271 (399)
                                       +.++.+||+|||++.....           .....+||+.|+|||++.+       ..++.++
T Consensus       154 -----------------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~  216 (336)
T 3g2f_A          154 -----------------KNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQV  216 (336)
T ss_dssp             -----------------CTTSCEEECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHH
T ss_pred             -----------------cCCCcEEEeeccceeecccccccCccccccccccCCCccceeCchhhcCCccccccccccccc
Confidence                             3467899999999865322           1224579999999999987       3567889


Q ss_pred             hhHHHHHHHHHHHhCCCCCCC-CCcHHHHHHHHHHhCCCCH-HHHHHhcccccccccCCcccCCCCCccchHHHHHHHhh
Q 015867          272 DMWSVGCILVELCTGEALFQT-HENLEHLAMMERALGPLPE-HMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKL  349 (399)
Q Consensus       272 DiwslG~il~ell~g~~Pf~~-~~~~~~~~~i~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~  349 (399)
                      |||||||++|+|++|..||.. ....+....+....+..|. .......      .....+..+|...            
T Consensus       217 DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~------------  278 (336)
T 3g2f_A          217 DMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLV------SREKQRPKFPEAW------------  278 (336)
T ss_dssp             HHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHH------TTSCCCCCCCTTC------------
T ss_pred             chHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhh------cccccCCCCCccc------------
Confidence            999999999999999766533 2211111111111111111 0000000      0000011111100            


Q ss_pred             hhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHh------CCccccC
Q 015867          350 DRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL------NHPFFRN  396 (399)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell------~hp~f~~  396 (399)
                              .....++.++.+||.+||+.||.+|||+.|++      .++|-++
T Consensus       279 --------~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~~~~  323 (336)
T 3g2f_A          279 --------KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIWERN  323 (336)
T ss_dssp             --------CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCCCC-
T ss_pred             --------ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHHHhc
Confidence                    11234667899999999999999999999994      4566554

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=100.00  E-value=1.7e-43  Score=331.04  Aligned_cols=262  Identities=25%  Similarity=0.337  Sum_probs=199.3

Q ss_pred             CccCCCE-EEEeeeccccceEEEEEE----EccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           62 ENLTPRY-KILSKMGEGTFGRVLECW----DRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        62 ~~~~~~y-~~~~~lG~G~~g~V~~~~----~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ..+.++| ++++.||+|+||+||++.    +..+++.||||+++...  .....+..|+++++.+.      |+||++++
T Consensus        26 ~~~~~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~   99 (318)
T 3lxp_A           26 TVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLY------HEHIIKYK   99 (318)
T ss_dssp             CBCCGGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCC------CTTBCCEE
T ss_pred             ceecHHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCC------CcchhhEE
Confidence            3455566 999999999999998875    34578999999997532  33456778999998885      59999999


Q ss_pred             eeecc--CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCC
Q 015867          135 NWFDY--RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       135 ~~~~~--~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~  211 (399)
                      +++.+  ...+++||||+ +++|.+++....   +++..+..++.||+.||.|||++||+||||||+|||+         
T Consensus       100 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~---------  167 (318)
T 3lxp_A          100 GCCEDAGAASLQLVMEYVPLGSLRDYLPRHS---IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLL---------  167 (318)
T ss_dssp             EEEEETTTTEEEEEECCCTTCBHHHHGGGSC---CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---------
T ss_pred             EEEecCCCceEEEEEecccCCcHHHHHhhCC---CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEE---------
Confidence            99987  46899999999 889999998754   9999999999999999999999999999999999999         


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~  285 (399)
                                     +.++.++|+|||++......      .....||..|+|||++.+..++.++||||||+++|+|++
T Consensus       168 ---------------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~  232 (318)
T 3lxp_A          168 ---------------DNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLT  232 (318)
T ss_dssp             ---------------CTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHT
T ss_pred             ---------------cCCCCEEECCccccccccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHh
Confidence                           45677999999998764432      234467888999999999999999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |..||.......     ............                         ........    ........+..++.
T Consensus       233 g~~p~~~~~~~~-----~~~~~~~~~~~~-------------------------~~~~~~~~----~~~~~~~~~~~~~~  278 (318)
T 3lxp_A          233 HCDSSQSPPTKF-----LELIGIAQGQMT-------------------------VLRLTELL----ERGERLPRPDKCPA  278 (318)
T ss_dssp             TTCGGGSHHHHH-----HHHHCSCCHHHH-------------------------HHHHHHHH----HTTCCCCCCTTCCH
T ss_pred             CCCcccccchhh-----hhhhcccccchh-------------------------HHHHHHHH----hcccCCCCCccccH
Confidence            999996432211     000000000000                         00000000    00011123356788


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ++.+||.+||+.||.+|||+.|+++
T Consensus       279 ~l~~li~~~l~~dP~~Rps~~ell~  303 (318)
T 3lxp_A          279 EVYHLMKNCWETEASFRPTFENLIP  303 (318)
T ss_dssp             HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHcCCCcccCcCHHHHHH
Confidence            9999999999999999999999985

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.6e-43  Score=338.27  Aligned_cols=245  Identities=16%  Similarity=0.227  Sum_probs=187.6

Q ss_pred             CEEEEeeeccccceEEEEEEEccC---CeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec-cC
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQT---QERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD-YR  140 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~-~~  140 (399)
                      +|++.+.||+|+||.||+|.+..+   +..||+|.++...  .....+..|+.+++.+      .||||+++++++. .+
T Consensus        90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l------~hpnIv~~~~~~~~~~  163 (373)
T 3c1x_A           90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDF------SHPNVLSLLGICLRSE  163 (373)
T ss_dssp             EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTC------CCTTBCCCCEEECCCS
T ss_pred             eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhC------CCCCcceEEEEEEcCC
Confidence            589999999999999999987543   3468999986432  2234455566655555      5799999999854 46


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||+                 
T Consensus       164 ~~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll-----------------  225 (373)
T 3c1x_A          164 GSPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML-----------------  225 (373)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE-----------------
T ss_pred             CCeEEEEECCCCCCHHHHHhhccc-CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEE-----------------
Confidence            7889999999 8899999976543 58999999999999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                             +.++.+||+|||++......       .....+|+.|+|||++.+..++.++|||||||++|+|++ |.+||.
T Consensus       226 -------~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~  298 (373)
T 3c1x_A          226 -------DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYP  298 (373)
T ss_dssp             -------CTTCCEEECCC---------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCT
T ss_pred             -------CCCCCEEEeeccccccccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCC
Confidence                   45678999999998653221       123457789999999999999999999999999999999 788998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+......                                                 ..+..++..+.+||
T Consensus       299 ~~~~~~~~~~~~~~~~~-------------------------------------------------~~p~~~~~~l~~li  329 (373)
T 3c1x_A          299 DVNTFDITVYLLQGRRL-------------------------------------------------LQPEYCPDPLYEVM  329 (373)
T ss_dssp             TSCSSCHHHHHHTTCCC-------------------------------------------------CCCTTCCHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHH
Confidence            76654444333221110                                                 11235677889999


Q ss_pred             HHccccCCCCCCCHHHHhCC
Q 015867          372 HGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~h  391 (399)
                      .+||+.||.+|||+.|++++
T Consensus       330 ~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          330 LKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             HHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHcCCChhhCcCHHHHHHH
Confidence            99999999999999998863

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=100.00  E-value=2.8e-43  Score=329.27  Aligned_cols=248  Identities=22%  Similarity=0.285  Sum_probs=194.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc-hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec----c
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI-RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD----Y  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~----~  139 (399)
                      .++|++.+.||+|+||.||+|.+..+++.||||++... ......+..|+++++.+.      |+||+++++++.    .
T Consensus        28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~~~~~~  101 (317)
T 2buj_A           28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFN------HPNILRLVAYCLRERGA  101 (317)
T ss_dssp             TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCC------CTTBCCCCEEEEEEETT
T ss_pred             CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcC------CCCeeeEEEEEEeccCC
Confidence            45799999999999999999999999999999998643 234456777888888774      699999999886    3


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      ....++||||+ +++|.+++...  ....+++..+..++.||+.||+|||++||+||||||+|||+              
T Consensus       102 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~--------------  167 (317)
T 2buj_A          102 KHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILL--------------  167 (317)
T ss_dssp             EEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE--------------
T ss_pred             CceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEE--------------
Confidence            45889999999 88999999763  22369999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCCC------------cccccCCCccchhhhhCCC---CCCcchhHHHHHHHH
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------------SSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILV  281 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------------~~~~gt~~y~aPE~~~~~~---~~~~~DiwslG~il~  281 (399)
                                +.++.++|+|||++.......            ....||+.|+|||++.+..   ++.++||||||+++|
T Consensus       168 ----------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~  237 (317)
T 2buj_A          168 ----------GDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLY  237 (317)
T ss_dssp             ----------CTTSCEEECCCSSCEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHH
T ss_pred             ----------cCCCCEEEEecCcchhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHH
Confidence                      346779999999876533211            1345799999999997654   789999999999999


Q ss_pred             HHHhCCCCCCCCCc--HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhcc
Q 015867          282 ELCTGEALFQTHEN--LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH  359 (399)
Q Consensus       282 ell~g~~Pf~~~~~--~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~  359 (399)
                      +|++|..||.....  ......+..                                                 ......
T Consensus       238 el~~g~~p~~~~~~~~~~~~~~~~~-------------------------------------------------~~~~~~  268 (317)
T 2buj_A          238 AMMFGEGPYDMVFQKGDSVALAVQN-------------------------------------------------QLSIPQ  268 (317)
T ss_dssp             HHHHSSCTTHHHHHTTSCHHHHHHC-------------------------------------------------C--CCC
T ss_pred             HHHhCCCChhhhhcccchhhHHhhc-------------------------------------------------cCCCCc
Confidence            99999999952100  000000000                                                 000111


Q ss_pred             chhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          360 VDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       360 ~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      .+.++.++.+||.+||+.||.+|||+.+++++
T Consensus       269 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          269 SPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            24567889999999999999999999999875

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=100.00  E-value=2.8e-42  Score=349.67  Aligned_cols=245  Identities=24%  Similarity=0.315  Sum_probs=198.8

Q ss_pred             CCCEEEEe-eeccccceEEEEEEEc--cCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           65 TPRYKILS-KMGEGTFGRVLECWDR--QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        65 ~~~y~~~~-~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+++.+.+ .||+|+||.||+|.+.  .++..||||+++...  .....+..|+++++.+.      |+||+++++++..
T Consensus       334 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~------hpniv~l~~~~~~  407 (613)
T 2ozo_A          334 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD------NPYIVRLIGVCQA  407 (613)
T ss_dssp             TTSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCC------CTTBCCEEEEEES
T ss_pred             ccceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCC------CCCEeeEEEEecc
Confidence            34677776 8999999999999765  356779999997532  34466778888887774      6999999999876


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                       +..++||||+ +++|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||||+.              
T Consensus       408 -~~~~lv~E~~~~g~L~~~l~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~--------------  471 (613)
T 2ozo_A          408 -EALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVN--------------  471 (613)
T ss_dssp             -SSEEEEEECCTTCBHHHHHTTCT-TTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE--------------
T ss_pred             -CCeEEEEEeCCCCcHHHHHhhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcC--------------
Confidence             5699999999 999999997653 36999999999999999999999999999999999999953              


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                                ++.+||+|||++.......      ....+|+.|+|||++.+..++.++|||||||++|||++ |..||.
T Consensus       472 ----------~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~  541 (613)
T 2ozo_A          472 ----------RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK  541 (613)
T ss_dssp             ----------TTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             ----------CCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence                      5679999999987643221      12345689999999999999999999999999999998 999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+....+.....                       .                          ..++.++.++.+||
T Consensus       542 ~~~~~~~~~~i~~~~~-----------------------~--------------------------~~p~~~~~~l~~li  572 (613)
T 2ozo_A          542 KMKGPEVMAFIEQGKR-----------------------M--------------------------ECPPECPPELYALM  572 (613)
T ss_dssp             TCCSHHHHHHHHTTCC-----------------------C--------------------------CCCTTCCHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCC-----------------------C--------------------------CCCCcCCHHHHHHH
Confidence            8888776665543211                       0                          11235678899999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||+.||.+|||+.++++
T Consensus       573 ~~cl~~dP~~RPs~~~l~~  591 (613)
T 2ozo_A          573 SDCWIYKWEDRPDFLTVEQ  591 (613)
T ss_dssp             HHTTCSSTTTSCCHHHHHH
T ss_pred             HHHcCCChhHCcCHHHHHH
Confidence            9999999999999999754

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=100.00  E-value=2.2e-42  Score=351.41  Aligned_cols=241  Identities=22%  Similarity=0.322  Sum_probs=197.2

Q ss_pred             EEEE-eeeccccceEEEEEEE--ccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           68 YKIL-SKMGEGTFGRVLECWD--RQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        68 y~~~-~~lG~G~~g~V~~~~~--~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      +.+. +.||+|+||.||+|.+  ..+++.||||+++...   .....+..|+++++.+.      |+||+++++++.. +
T Consensus       370 ~~l~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~------hpnIv~l~~~~~~-~  442 (635)
T 4fl3_A          370 LTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD------NPYIVRMIGICEA-E  442 (635)
T ss_dssp             EEEEEEEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCC------CTTBCCEEEEEES-S
T ss_pred             ccccCCEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEEec-C
Confidence            4544 4899999999999954  4567899999997532   23466888999999885      5999999998864 5


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ +++|.+++...+  .+++..+..|+.||+.||+|||++|||||||||+||||+.                
T Consensus       443 ~~~lv~E~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~----------------  504 (635)
T 4fl3_A          443 SWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT----------------  504 (635)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE----------------
T ss_pred             CEEEEEEccCCCCHHHHHhhCC--CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeC----------------
Confidence            688999999 999999998765  5999999999999999999999999999999999999954                


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTH  293 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~  293 (399)
                              ++.+||+|||++......      .....||+.|+|||++.+..++.++|||||||++|||++ |..||.+.
T Consensus       505 --------~~~~kL~DFGla~~~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~  576 (635)
T 4fl3_A          505 --------QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM  576 (635)
T ss_dssp             --------TTEEEECCTTHHHHTTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTC
T ss_pred             --------CCCEEEEEcCCccccccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence                    567999999998654322      123356788999999999999999999999999999998 99999988


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+....+......                                                 ..+..++.++.+||.+
T Consensus       577 ~~~~~~~~i~~~~~~-------------------------------------------------~~p~~~~~~l~~li~~  607 (635)
T 4fl3_A          577 KGSEVTAMLEKGERM-------------------------------------------------GCPAGCPREMYDLMNL  607 (635)
T ss_dssp             CHHHHHHHHHTTCCC-------------------------------------------------CCCTTCCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHH
Confidence            877766655432111                                                 1123567889999999


Q ss_pred             ccccCCCCCCCHHHHhC
Q 015867          374 LLRYDPSERLTARQALN  390 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~  390 (399)
                      ||+.||.+|||+++|++
T Consensus       608 cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          608 CWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             HTCSSTTTSCCHHHHHH
T ss_pred             HcCCCHhHCcCHHHHHH
Confidence            99999999999999875

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=100.00  E-value=3.3e-43  Score=324.51  Aligned_cols=246  Identities=22%  Similarity=0.296  Sum_probs=192.6

Q ss_pred             CCCEEEEeeeccccceEEEEEEEcc-CC--eEEEEEEEecc----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQ-TQ--ERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~-~~--~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|++.+.||+|+||+||+|.+.. ++  ..||||+++..    ......+..|+++++.+.      |+||+++++++
T Consensus        17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~------h~~i~~~~~~~   90 (291)
T 1u46_A           17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD------HRNLIRLYGVV   90 (291)
T ss_dssp             GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC------CTTBCCEEEEE
T ss_pred             hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCC------CCCcccEEEEE
Confidence            4579999999999999999998543 33  36999998643    223456777888888874      69999999998


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      .... .++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+|+||||+|||++.            
T Consensus        91 ~~~~-~~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~------------  156 (291)
T 1u46_A           91 LTPP-MKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT------------  156 (291)
T ss_dssp             CSSS-CEEEEECCTTCBHHHHHHHHGG-GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE------------
T ss_pred             ccCC-ceeeEecccCCCHHHHHHhccC-CcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcC------------
Confidence            8765 88999999 8999999986532 5899999999999999999999999999999999999954            


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEAL  289 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~P  289 (399)
                                  ++.++|+|||++.......      ....+|..|+|||++.+..++.++||||||+++|+|++ |..|
T Consensus       157 ------------~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p  224 (291)
T 1u46_A          157 ------------RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP  224 (291)
T ss_dssp             ------------TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             ------------CCCEEEccccccccccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence                        5679999999987643322      23457888999999999889999999999999999999 9999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+..+....+......+                                                .....++.++.+
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~~l~~  256 (291)
T 1u46_A          225 WIGLNGSQILHKIDKEGERL------------------------------------------------PRPEDCPQDIYN  256 (291)
T ss_dssp             TTTCCHHHHHHHHHTSCCCC------------------------------------------------CCCTTCCHHHHH
T ss_pred             cccCCHHHHHHHHHccCCCC------------------------------------------------CCCcCcCHHHHH
Confidence            99887766555543221111                                                112356788999


Q ss_pred             HHHHccccCCCCCCCHHHHhC
Q 015867          370 LLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~  390 (399)
                      +|.+||..||.+|||+.++++
T Consensus       257 li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          257 VMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             HHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHccCCcccCcCHHHHHH
Confidence            999999999999999999987

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=100.00  E-value=9.1e-43  Score=324.27  Aligned_cols=256  Identities=22%  Similarity=0.336  Sum_probs=198.2

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecc-----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI-----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      |...+.||+|+||.||+|.+  +++.||||++...     ......+..|+.+++.+.      ||||+++++++.+.+.
T Consensus        33 ~~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~------h~~i~~~~~~~~~~~~  104 (307)
T 2nru_A           33 SVGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ------HENLVELLGFSSDGDD  104 (307)
T ss_dssp             TTTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCC------CTTBCCEEEEECSSSS
T ss_pred             cccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcC------CCCeEEEEEEEecCCc
Confidence            44458899999999999975  5788999998642     223456778899988885      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNK-YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .++||||+ +++|.+++.... ...+++..+..++.||+.||.|||++||+||||||+|||+                  
T Consensus       105 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili------------------  166 (307)
T 2nru_A          105 LCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILL------------------  166 (307)
T ss_dssp             CEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEE------------------
T ss_pred             eEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEE------------------
Confidence            99999999 999999997532 3359999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                            +.++.++|+|||++......     .....||+.|+|||++.+ .++.++||||||+++|+|++|..||.....
T Consensus       167 ------~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~  239 (307)
T 2nru_A          167 ------DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHRE  239 (307)
T ss_dssp             ------CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBS
T ss_pred             ------cCCCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcc
Confidence                  45678999999988654332     234579999999999876 488999999999999999999999987554


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      ......+..........+..        +                           +..........++..+.+||.+||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~--------~---------------------------~~~~~~~~~~~~~~~l~~li~~cl  284 (307)
T 2nru_A          240 PQLLLDIKEEIEDEEKTIED--------Y---------------------------IDKKMNDADSTSVEAMYSVASQCL  284 (307)
T ss_dssp             SSBTTHHHHHHHTTSCCHHH--------H---------------------------SCSSCSCCCHHHHHHHHHHHHHHT
T ss_pred             hHHHHHHHHHhhhhhhhhhh--------h---------------------------ccccccccchHHHHHHHHHHHHHc
Confidence            33222222211110000000        0                           000011223456788999999999


Q ss_pred             ccCCCCCCCHHHHhCC
Q 015867          376 RYDPSERLTARQALNH  391 (399)
Q Consensus       376 ~~dP~~R~t~~ell~h  391 (399)
                      +.||.+|||+.+++++
T Consensus       285 ~~~p~~Rps~~~l~~~  300 (307)
T 2nru_A          285 HEKKNKRPDIKKVQQL  300 (307)
T ss_dssp             CSSTTTSCCHHHHHHH
T ss_pred             CCCcccCcCHHHHHHH
Confidence            9999999999999863

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=100.00  E-value=2.1e-44  Score=339.80  Aligned_cols=271  Identities=18%  Similarity=0.246  Sum_probs=193.4

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---------hhHHHHHHHHHHHHhhhcCCC---C------
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---------YRDAAMIEIDVLQHLAKNDKG---G------  126 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------~~~~~~~e~~~l~~l~~~~~~---~------  126 (399)
                      .++|++.+.||+|+||+||+|++  +|+.||||++.....         ....+..|+.+++.+......   .      
T Consensus        19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~   96 (336)
T 2vuw_A           19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG   96 (336)
T ss_dssp             HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred             cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence            35799999999999999999987  689999999975321         226678899999998732211   1      


Q ss_pred             -----------Ccceeeeceeecc-------------CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHH
Q 015867          127 -----------SSHCVQIRNWFDY-------------RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES  181 (399)
Q Consensus       127 -----------~~~iv~~~~~~~~-------------~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~  181 (399)
                                 ||||++++++|.+             .+..|+||||+ +|++.+.+.+   ..+++..++.++.||+.|
T Consensus        97 l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~a  173 (336)
T 2vuw_A           97 LNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTAS  173 (336)
T ss_dssp             EEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHH
T ss_pred             hcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHH
Confidence                       5677777776665             78999999999 7866666543   258999999999999999


Q ss_pred             HHHHH-HCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchh
Q 015867          182 VAYMH-DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPE  260 (399)
Q Consensus       182 L~~lH-~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE  260 (399)
                      |+||| ++||+||||||+|||++.++.... .+....   ...........+||+|||++.....  ...+||+.|+|||
T Consensus       174 L~~lH~~~~ivHrDlKp~NILl~~~~~~~~-~~~~~~---~~~~~~~~~~~vkL~DFG~a~~~~~--~~~~gt~~y~aPE  247 (336)
T 2vuw_A          174 LAVAEASLRFEHRDLHWGNVLLKKTSLKKL-HYTLNG---KSSTIPSCGLQVSIIDYTLSRLERD--GIVVFCDVSMDED  247 (336)
T ss_dssp             HHHHHHHHCCBCSCCCGGGEEEEECSCSEE-EEEETT---EEEEEECTTEEEEECCCTTCBEEET--TEEECCCCTTCSG
T ss_pred             HHHHHHhCCEeECCCCHHHEEEeccCCcce-eeeccC---ccccccCCCceEEEeeccccEecCC--CcEEEeecccChh
Confidence            99999 999999999999999976541000 000000   0000001123799999999976543  2558999999999


Q ss_pred             hhhCCCCCCcchhHHHHHH-HHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCcc
Q 015867          261 VILGLGWSYPCDMWSVGCI-LVELCTGEALFQTHENLE-HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAV  338 (399)
Q Consensus       261 ~~~~~~~~~~~DiwslG~i-l~ell~g~~Pf~~~~~~~-~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~  338 (399)
                      ++.+.. +.++|||||+++ .++++.|..||....... ....+.... .                        ++.   
T Consensus       248 ~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~-~------------------------~~~---  298 (336)
T 2vuw_A          248 LFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQM-T------------------------FKT---  298 (336)
T ss_dssp             GGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTC-C------------------------CSS---
T ss_pred             hhcCCC-ccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhh-c------------------------cCc---
Confidence            998876 899999998777 778889999984311101 111111000 0                        000   


Q ss_pred             chHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHh-CCcccc
Q 015867          339 SRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL-NHPFFR  395 (399)
Q Consensus       339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell-~hp~f~  395 (399)
                                     .......+.+++++.+||.+||+.|     |++|+| +||||+
T Consensus       299 ---------------~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          299 ---------------KCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             ---------------CCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             ---------------ccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence                           0001123467889999999999987     999999 999996

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=100.00  E-value=1.3e-42  Score=328.14  Aligned_cols=260  Identities=20%  Similarity=0.243  Sum_probs=200.2

Q ss_pred             ceeeccCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           55 HYVFNLGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        55 ~~~~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      ..++..+..+.++|++.+.||+|+||.||+|.+  +++.||||++...  ....+..|.+++..+.    ..|+||++++
T Consensus        31 ~~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~--~~~~~~~e~~~~~~~~----l~h~ni~~~~  102 (342)
T 1b6c_B           31 GLPLLVQRTIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR--EERSWFREAEIYQTVM----LRHENILGFI  102 (342)
T ss_dssp             SSCHHHHHHHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG--GHHHHHHHHHHHHHSC----CCCTTBCCEE
T ss_pred             CCceeecccccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch--hHHHHHHHHHHHHHhh----cCCCcEEEEE
Confidence            334555666778999999999999999999987  5899999998653  2355667777777643    3579999999


Q ss_pred             eeeccCC----eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH--------HCCccccCCCCCcEE
Q 015867          135 NWFDYRN----HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH--------DLRLIHTDLKPENIL  201 (399)
Q Consensus       135 ~~~~~~~----~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH--------~~givH~Dikp~NIl  201 (399)
                      +++...+    ..++||||+ +++|.+++.+.   .+++..+..++.||+.||.|||        +.||+||||||+|||
T Consensus       103 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIl  179 (342)
T 1b6c_B          103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNIL  179 (342)
T ss_dssp             EEEECCCSSCCCEEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEE
T ss_pred             eeecccCCccceeEEEEeecCCCcHHHHHhcc---CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEE
Confidence            9988765    899999999 88999999875   4999999999999999999999        899999999999999


Q ss_pred             EeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCCC------CC
Q 015867          202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGLG------WS  268 (399)
Q Consensus       202 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~------~~  268 (399)
                      +                        +.++.+||+|||++......       .....||+.|+|||++.+..      ++
T Consensus       180 l------------------------~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  235 (342)
T 1b6c_B          180 V------------------------KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESF  235 (342)
T ss_dssp             E------------------------CTTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHH
T ss_pred             E------------------------CCCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccC
Confidence            9                        44668999999998653322       24457999999999998762      34


Q ss_pred             CcchhHHHHHHHHHHHhC----------CCCCCCCCc----HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCC
Q 015867          269 YPCDMWSVGCILVELCTG----------EALFQTHEN----LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWP  334 (399)
Q Consensus       269 ~~~DiwslG~il~ell~g----------~~Pf~~~~~----~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p  334 (399)
                      .++||||||+++|+|++|          ..||.....    .+.........                     ..+...|
T Consensus       236 ~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~  294 (342)
T 1b6c_B          236 KRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ---------------------KLRPNIP  294 (342)
T ss_dssp             HHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTS---------------------CCCCCCC
T ss_pred             CcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHH---------------------HhCCCCc
Confidence            789999999999999999          778865321    11111110000                     0000000


Q ss_pred             CCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          335 EGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      .                     ......++..+.+||.+||+.||.+|||+.++++|
T Consensus       295 ~---------------------~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~  330 (342)
T 1b6c_B          295 N---------------------RWQSCEALRVMAKIMRECWYANGAARLTALRIKKT  330 (342)
T ss_dssp             G---------------------GGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred             c---------------------cccchhHHHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence            0                     00113556788999999999999999999999875

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=100.00  E-value=3.3e-42  Score=323.43  Aligned_cols=261  Identities=24%  Similarity=0.309  Sum_probs=198.7

Q ss_pred             cCCCEEEEeeeccccceEEEEEE----EccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           64 LTPRYKILSKMGEGTFGRVLECW----DRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~----~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ..++|++++.||+|+||.||+|.    +..+++.||||++.... .....+..|+++++.+.      |+||+++++++.
T Consensus        39 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~------h~~iv~~~~~~~  112 (326)
T 2w1i_A           39 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ------HDNIVKYKGVCY  112 (326)
T ss_dssp             CGGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCC------CTTBCCEEEEEC
T ss_pred             CHHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCC------CCCeeeEEEEEE
Confidence            34579999999999999999998    46689999999996532 33456778888888774      599999999887


Q ss_pred             cC--CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          139 YR--NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       139 ~~--~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      ..  ...++||||+ +++|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||++.           
T Consensus       113 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~-----------  180 (326)
T 2w1i_A          113 SAGRRNLKLIMEYLPYGSLRDYLQKHKE-RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN-----------  180 (326)
T ss_dssp             C----CCEEEECCCTTCBHHHHHHHSTT-SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE-----------
T ss_pred             ecCCCceEEEEECCCCCCHHHHHHhccc-CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcC-----------
Confidence            64  3789999999 8899999987643 5999999999999999999999999999999999999954           


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                   ++.++|+|||++.......      ....++..|+|||++.+..++.++||||||+++|+|++|..|
T Consensus       181 -------------~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~  247 (326)
T 2w1i_A          181 -------------ENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK  247 (326)
T ss_dssp             -------------TTEEEECCCTTCEECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCG
T ss_pred             -------------CCcEEEecCcchhhccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCC
Confidence                         5679999999987644332      234567789999999998999999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCC--HHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHH
Q 015867          290 FQTHENLEHLAMMERALGPLP--EHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTL  367 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p--~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (399)
                      |.....  ..   ....+..+  ......                         ......     .......+..++.++
T Consensus       248 ~~~~~~--~~---~~~~~~~~~~~~~~~~-------------------------~~~~~~-----~~~~~~~~~~~~~~l  292 (326)
T 2w1i_A          248 SKSPPA--EF---MRMIGNDKQGQMIVFH-------------------------LIELLK-----NNGRLPRPDGCPDEI  292 (326)
T ss_dssp             GGSHHH--HH---HHHHCTTCCTHHHHHH-------------------------HHHHHH-----TTCCCCCCTTCCHHH
T ss_pred             CCCCHH--HH---HHhhccccchhhhHHH-------------------------HHHHhh-----cCCCCCCCCcccHHH
Confidence            864211  11   01111000  000000                         000000     000112235678889


Q ss_pred             HHHHHHccccCCCCCCCHHHHhC
Q 015867          368 TDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       368 ~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||.+||..||.+|||+.|+++
T Consensus       293 ~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          293 YMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHcCCChhhCcCHHHHHH
Confidence            99999999999999999999875

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=100.00  E-value=1.7e-42  Score=324.07  Aligned_cols=248  Identities=21%  Similarity=0.283  Sum_probs=196.1

Q ss_pred             cCCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           60 LGENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        60 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      ..+...++|++.+.||+|+||.||+|.+..   .||+|++....   .....+..|+.+++.+      .|+||++++++
T Consensus        27 ~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l------~h~~iv~~~~~   97 (319)
T 2y4i_B           27 EWDIPFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQT------RHENVVLFMGA   97 (319)
T ss_dssp             GSSSCCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTC------CCTTBCCCCEE
T ss_pred             cccCCHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcC------CCCCEeEEEEE
Confidence            334456789999999999999999998754   39999986432   1223445566666555      46999999999


Q ss_pred             eccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          137 FDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                      +.+.+..++||||+ +++|.+++...+ ..+++..+..++.||+.||+|||++||+||||||+|||++            
T Consensus        98 ~~~~~~~~iv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~------------  164 (319)
T 2y4i_B           98 CMSPPHLAIITSLCKGRTLYSVVRDAK-IVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD------------  164 (319)
T ss_dssp             EECSSCEEEECBCCCSEEHHHHTTSSC-CCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------------
T ss_pred             EecCCceEEEeecccCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe------------
Confidence            99999999999999 899999997654 2589999999999999999999999999999999999993            


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCC--------CCCcccccCCCccchhhhhC---------CCCCCcchhHHHHH
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDN--------QNHSSIVSTRHYRAPEVILG---------LGWSYPCDMWSVGC  278 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--------~~~~~~~gt~~y~aPE~~~~---------~~~~~~~DiwslG~  278 (399)
                                   ++.++|+|||++....        .......||+.|+|||++.+         ..++.++||||||+
T Consensus       165 -------------~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~  231 (319)
T 2y4i_B          165 -------------NGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGT  231 (319)
T ss_dssp             ---------------CCEECCCSCCC----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHH
T ss_pred             -------------CCCEEEeecCCccccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHH
Confidence                         4579999999876432        12234468999999999975         35789999999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          279 ILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       279 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      ++|+|++|..||...........+.....+.                                                .
T Consensus       232 il~el~~g~~p~~~~~~~~~~~~~~~~~~~~------------------------------------------------~  263 (319)
T 2y4i_B          232 IWYELHAREWPFKTQPAEAIIWQMGTGMKPN------------------------------------------------L  263 (319)
T ss_dssp             HHHHHHHSSCSSSSCCHHHHHHHHHTTCCCC------------------------------------------------C
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHhccCCCCC------------------------------------------------C
Confidence            9999999999998877666555443321110                                                0


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ....++.++.+||.+||..||.+|||+.++++
T Consensus       264 ~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          264 SQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             CCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             CcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            11245677899999999999999999999986

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=100.00  E-value=2.1e-41  Score=345.42  Aligned_cols=247  Identities=24%  Similarity=0.326  Sum_probs=201.9

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccC---CeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQT---QERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ...++|++.+.||+|+||.||+|.+..+   +..||||+++...  .....+..|+.+++.+.      ||||+++++++
T Consensus       387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~l~~~~  460 (656)
T 2j0j_A          387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFD------HPHIVKLIGVI  460 (656)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCC------CTTBCCEEEEE
T ss_pred             cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEE
Confidence            3456899999999999999999987543   5679999986432  33356777888888874      69999999988


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      . ++..++||||+ +++|.+++...+. .+++..+..++.||+.||.|||++||+||||||+|||++.            
T Consensus       461 ~-~~~~~lv~E~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~------------  526 (656)
T 2j0j_A          461 T-ENPVWIIMELCTLGELRSFLQVRKF-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS------------  526 (656)
T ss_dssp             C-SSSCEEEEECCTTCBHHHHHHHTTT-TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE------------
T ss_pred             e-cCceEEEEEcCCCCcHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeC------------
Confidence            5 46689999999 8999999986543 5899999999999999999999999999999999999954            


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQ  291 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~  291 (399)
                                  ++.+||+|||++.......    ....||+.|+|||++.+..++.++|||||||++|+|++ |..||.
T Consensus       527 ------------~~~vkL~DFG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~  594 (656)
T 2j0j_A          527 ------------NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQ  594 (656)
T ss_dssp             ------------TTEEEECCCCCCCSCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             ------------CCCEEEEecCCCeecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCC
Confidence                        5679999999987643322    23456789999999999999999999999999999997 999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+....+......                                                 ..++.++..+.+||
T Consensus       595 ~~~~~~~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l~~li  625 (656)
T 2j0j_A          595 GVKNNDVIGRIENGERL-------------------------------------------------PMPPNCPPTLYSLM  625 (656)
T ss_dssp             TCCHHHHHHHHHHTCCC-------------------------------------------------CCCTTCCHHHHHHH
T ss_pred             CCCHHHHHHHHHcCCCC-------------------------------------------------CCCccccHHHHHHH
Confidence            88877766665442111                                                 11235678889999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||..||.+|||+.++++
T Consensus       626 ~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          626 TKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             HHHTCSSGGGSCCHHHHHH
T ss_pred             HHHcCCChhHCcCHHHHHH
Confidence            9999999999999999875

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=100.00  E-value=2.3e-42  Score=318.42  Aligned_cols=231  Identities=14%  Similarity=0.026  Sum_probs=179.7

Q ss_pred             eccCC-ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceee
Q 015867           58 FNLGE-NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQ  132 (399)
Q Consensus        58 ~~~~~-~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~  132 (399)
                      +..|. .+.++|++.+.||+|+||.||+|++..+++.||||++.....    ....+..|..++..+      .|+||++
T Consensus        22 ~~~g~~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l------~hp~iv~   95 (286)
T 3uqc_A           22 LVPGARIANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRI------DKPGVAR   95 (286)
T ss_dssp             CCTTCEETTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTC------CCTTBCC
T ss_pred             CCCCCEEecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcC------CCCCcce
Confidence            45566 677899999999999999999999999999999999975422    225566677777665      4699999


Q ss_pred             eceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCC
Q 015867          133 IRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       133 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~  211 (399)
                      +++++.+.+..|+||||+ |++|.++++..    .....+..++.||+.||+|||++||+||||||+|||++.       
T Consensus        96 ~~~~~~~~~~~~lv~e~~~g~~L~~~l~~~----~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~-------  164 (286)
T 3uqc_A           96 VLDVVHTRAGGLVVAEWIRGGSLQEVADTS----PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSI-------  164 (286)
T ss_dssp             EEEEEEETTEEEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEET-------
T ss_pred             eeEEEEECCcEEEEEEecCCCCHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcC-------
Confidence            999999999999999999 89999999542    455678889999999999999999999999999999954       


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                       ++.++|+++|                 |++       +++.++|||||||++|+|++|+.||.
T Consensus       165 -----------------~g~~kl~~~~-----------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~  203 (286)
T 3uqc_A          165 -----------------DGDVVLAYPA-----------------TMP-------DANPQDDIRGIGASLYALLVNRWPLP  203 (286)
T ss_dssp             -----------------TSCEEECSCC-----------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSC
T ss_pred             -----------------CCCEEEEecc-----------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCC
Confidence                             5567776443                 333       37899999999999999999999998


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+.+...                      . .......                    .......+.++.++.+||
T Consensus       204 ~~~~~~~~~~~----------------------~-~~~~~~~--------------------~~~~~~~~~~~~~l~~li  240 (286)
T 3uqc_A          204 EAGVRSGLAPA----------------------E-RDTAGQP--------------------IEPADIDRDIPFQISAVA  240 (286)
T ss_dssp             CCSBCCCSEEC----------------------C-BCTTSCB--------------------CCHHHHCTTSCHHHHHHH
T ss_pred             cCCcchhhHHH----------------------H-HHhccCC--------------------CChhhcccCCCHHHHHHH
Confidence            75542100000                      0 0000000                    000122346788899999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||+.||.+| |+.|+++
T Consensus       241 ~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          241 ARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             HHHHCTTSSCC-CHHHHHH
T ss_pred             HHHcccCCccC-CHHHHHH
Confidence            99999999999 9999876

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=6.7e-42  Score=351.69  Aligned_cols=245  Identities=25%  Similarity=0.353  Sum_probs=195.9

Q ss_pred             eccCCccCCCEEEEeeeccccceEEEEEEEcc-CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           58 FNLGENLTPRYKILSKMGEGTFGRVLECWDRQ-TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        58 ~~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~-~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      +..++.+.++|++.+.||+|+||.||+|.+.. +++.||||++....  .....+..|+++++.+      .||||++++
T Consensus        72 ~~~g~~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l------~hp~iv~~~  145 (681)
T 2pzi_A           72 LNPGDIVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEV------VHPSIVQIF  145 (681)
T ss_dssp             SCTTCEETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGC------CCTTBCCEE
T ss_pred             CCCCCEeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhc------CCCCcCeEe
Confidence            34567788999999999999999999999876 78999999986422  2334456677776665      469999999


Q ss_pred             eeeccCCe-----EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          135 NWFDYRNH-----ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       135 ~~~~~~~~-----~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      +++...+.     .||||||+ |++|.+++..    .+++..+..|+.||+.||.|||++|||||||||+|||++.    
T Consensus       146 ~~~~~~~~~~~~~~~lv~E~~~g~~L~~~~~~----~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~----  217 (681)
T 2pzi_A          146 NFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQ----KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE----  217 (681)
T ss_dssp             EEEEEECTTSCEEEEEEEECCCCEECC----C----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECS----
T ss_pred             eeEeecCCCCCceeEEEEEeCCCCcHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeC----
Confidence            99987654     79999999 8999887754    5999999999999999999999999999999999999932    


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                                           +.+||+|||++...... ...+||+.|+|||++.+.. +.++|||||||++|+|++|.+
T Consensus       218 ---------------------~~~kl~DFG~a~~~~~~-~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~  274 (681)
T 2pzi_A          218 ---------------------EQLKLIDLGAVSRINSF-GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLP  274 (681)
T ss_dssp             ---------------------SCEEECCCTTCEETTCC-SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCC
T ss_pred             ---------------------CcEEEEecccchhcccC-CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCC
Confidence                                 36999999998765443 5668999999999997754 899999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||.+....                                   ..+.                     .......+..+.
T Consensus       275 ~~~~~~~~-----------------------------------~~~~---------------------~~~~~~~~~~l~  298 (681)
T 2pzi_A          275 TRNGRYVD-----------------------------------GLPE---------------------DDPVLKTYDSYG  298 (681)
T ss_dssp             EETTEECS-----------------------------------SCCT---------------------TCHHHHHCHHHH
T ss_pred             CCcccccc-----------------------------------cccc---------------------cccccccCHHHH
Confidence            88642110                                   0000                     000113456788


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCcccc
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      +||.+||+.||.+||++.+.+.|+|+.
T Consensus       299 ~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          299 RLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             HHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             HHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            999999999999999999888888874

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=100.00  E-value=7.8e-35  Score=291.87  Aligned_cols=183  Identities=19%  Similarity=0.108  Sum_probs=130.6

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecc-----------hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSI-----------RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----------~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ..++.|+.|.+..++....|+.||+|++.+.           ......+.+|+++|+++.     .|+||++++++++++
T Consensus       240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~-----~~~~i~~~~~~~ed~  314 (569)
T 4azs_A          240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPP-----AGFDAPAVLAHGENA  314 (569)
T ss_dssp             CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCC-----TTCCCCCEEEEEECS
T ss_pred             hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcC-----CCCCeeEEEEEEEEC
Confidence            3467888888888887788999999999642           123355788999998875     468999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +..||||||+ |++|.++|.+.+  .+++.   .|+.||+.||+|||++|||||||||+|||+                 
T Consensus       315 ~~~yLVMEyv~G~~L~d~i~~~~--~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL-----------------  372 (569)
T 4azs_A          315 QSGWLVMEKLPGRLLSDMLAAGE--EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMV-----------------  372 (569)
T ss_dssp             SEEEEEEECCCSEEHHHHHHTTC--CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEE-----------------
T ss_pred             CEEEEEEecCCCCcHHHHHHhCC--CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEE-----------------
Confidence            9999999999 999999998876  57764   589999999999999999999999999999                 


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                             +.++.+||+|||+|+....   ...+.+||+.|||||++.+. +..++|+||+|++++++.++..+
T Consensus       373 -------~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~YmAPE~l~g~-~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          373 -------DARQHARLIDFGSIVTTPQDCSWPTNLVQSFFVFVNELFAEN-KSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             -------CTTSCEEECCCTTEESCC---CCSHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred             -------CCCCCEEEeecccCeeCCCCCccccCceechhhccHHHhCCC-CCCcccccccccchhhhccccch
Confidence                   4567899999999876432   34567899999999999874 67789999999998887666443

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.95  E-value=4.5e-28  Score=241.55  Aligned_cols=180  Identities=18%  Similarity=0.166  Sum_probs=139.6

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      +...+.||+|+||.||+|.  ..++.+++|......         .....+..|+++++.+.|      +||+.+..++.
T Consensus       338 ~~~~~~LG~G~fg~Vy~~~--~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h------~nIv~~~~~~~  409 (540)
T 3en9_A          338 KIPEHLIGKGAEADIKRDS--YLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKD------FGIPAPYIFDV  409 (540)
T ss_dssp             ----------CCEEEEEEE--CSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGG------GTCCCCCEEEE
T ss_pred             CCCCCEEeeCCCEEEEEEE--ECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCC------CCcCceEEEEE
Confidence            3556789999999999994  456789999864311         113346789999999865      89995555555


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      ..+..||||||+ |++|.+++..          +..++.||+.||+|||++||+||||||+|||++              
T Consensus       410 ~~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~--------------  465 (540)
T 3en9_A          410 DLDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD--------------  465 (540)
T ss_dssp             ETTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES--------------
T ss_pred             eCCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC--------------
Confidence            667779999999 8999999875          458999999999999999999999999999992              


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCCC----------cccccCCCccchhhhhC--CCCCCcchhHHHHHHHHHHHh
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNH----------SSIVSTRHYRAPEVILG--LGWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~----------~~~~gt~~y~aPE~~~~--~~~~~~~DiwslG~il~ell~  285 (399)
                                .  .+||+|||++.......          ...+||+.|||||++..  ..|+..+|+||..+-..+-+.
T Consensus       466 ----------~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~  533 (540)
T 3en9_A          466 ----------K--DLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVE  533 (540)
T ss_dssp             ----------S--SEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHH
T ss_pred             ----------C--eEEEEECccCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence                      3  79999999998765431          35689999999999987  578888999999999998888


Q ss_pred             CCCCCC
Q 015867          286 GEALFQ  291 (399)
Q Consensus       286 g~~Pf~  291 (399)
                      ++.+|.
T Consensus       534 ~r~rY~  539 (540)
T 3en9_A          534 RRARYV  539 (540)
T ss_dssp             TCSCCC
T ss_pred             hccccC
Confidence            887774

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.92  E-value=4.9e-25  Score=201.89  Aligned_cols=154  Identities=21%  Similarity=0.264  Sum_probs=118.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-------------------hhHHHHHHHHHHHHhhhcCCCCC
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------------------YRDAAMIEIDVLQHLAKNDKGGS  127 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------------~~~~~~~e~~~l~~l~~~~~~~~  127 (399)
                      .|.+.+.||+|+||.||+|.+ .+|+.||||+++....                   ....+..|+++++.+.       
T Consensus        91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~-------  162 (282)
T 1zar_A           91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ-------  162 (282)
T ss_dssp             CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT-------
T ss_pred             EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc-------
Confidence            366779999999999999998 8899999999964221                   2345778999999886       


Q ss_pred             cceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          128 SHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       128 ~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                       | +.+...+. .+..|+||||+ |++|.+ +.      .  .....++.||+.||.|||++||+||||||+|||++   
T Consensus       163 -~-~~v~~~~~-~~~~~lvmE~~~g~~L~~-l~------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~---  227 (282)
T 1zar_A          163 -G-LAVPKVYA-WEGNAVLMELIDAKELYR-VR------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS---  227 (282)
T ss_dssp             -T-SSSCCEEE-EETTEEEEECCCCEEGGG-CC------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE---
T ss_pred             -C-CCcCeEEe-ccceEEEEEecCCCcHHH-cc------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE---
Confidence             2 33333333 35569999999 889987 32      1  22457999999999999999999999999999993   


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC----------CCCCCcchhHH
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG----------LGWSYPCDMWS  275 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~----------~~~~~~~Diws  275 (399)
                                            ++.++|+|||++.          .+..++|||++.+          ..|+..+|+|.
T Consensus       228 ----------------------~~~vkl~DFG~a~----------~~~~~~a~e~l~rdv~~i~~~f~~~~~~~~~~~~  274 (282)
T 1zar_A          228 ----------------------EEGIWIIDFPQSV----------EVGEEGWREILERDVRNIITYFSRTYRTEKDINS  274 (282)
T ss_dssp             ----------------------TTEEEECCCTTCE----------ETTSTTHHHHHHHHHHHHHHHHHHHHCCCCCHHH
T ss_pred             ----------------------CCcEEEEECCCCe----------ECCCCCHHHHHHHHHHHHHHHHHHhcCCCCChHH
Confidence                                  5679999999875          4556899999854          34556666664

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.86  E-value=1.6e-21  Score=176.26  Aligned_cols=136  Identities=16%  Similarity=0.176  Sum_probs=105.0

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeE--EEEEEEecchhh-------------------------hHHHHHHHHHHHHhh
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQER--VAIKVVRSIRKY-------------------------RDAAMIEIDVLQHLA  120 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~--vaiK~~~~~~~~-------------------------~~~~~~e~~~l~~l~  120 (399)
                      |.+.+.||+|+||.||+|.+..+|+.  ||||+++.....                         ...+..|..++..+.
T Consensus        49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~  128 (258)
T 1zth_A           49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK  128 (258)
T ss_dssp             EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred             hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence            88999999999999999998778999  999997542111                         125677999999998


Q ss_pred             hcCCCCCcceeeeceeeccCCeEEEEEccCC--C----CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH-HCCcccc
Q 015867          121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLG--P----SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH-DLRLIHT  193 (399)
Q Consensus       121 ~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~~--~----~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH-~~givH~  193 (399)
                      +... .+|.+   +..    +..+|||||++  |    +|.++...     .++..+..++.||+.+|.||| +.||+||
T Consensus       129 ~~~i-~~p~~---~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHr  195 (258)
T 1zth_A          129 EAGV-SVPQP---YTY----MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHA  195 (258)
T ss_dssp             HTTC-CCCCE---EEE----ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECS
T ss_pred             hCCC-CCCeE---EEc----CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence            7431 23333   322    35689999994  3    77776432     234467789999999999999 9999999


Q ss_pred             CCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCccc
Q 015867          194 DLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF  242 (399)
Q Consensus       194 Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~  242 (399)
                      ||||+|||++                        .  .++|+|||+|..
T Consensus       196 Dlkp~NILl~------------------------~--~~~liDFG~a~~  218 (258)
T 1zth_A          196 DLSEYNIMYI------------------------D--KVYFIDMGQAVT  218 (258)
T ss_dssp             SCSTTSEEES------------------------S--SEEECCCTTCEE
T ss_pred             CCCHHHEEEc------------------------C--cEEEEECccccc
Confidence            9999999992                        3  799999999864

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.76  E-value=7.5e-19  Score=165.47  Aligned_cols=143  Identities=18%  Similarity=0.176  Sum_probs=96.6

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh---------------hh--------HHHHHHHHHHHHhhhcCC
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK---------------YR--------DAAMIEIDVLQHLAKNDK  124 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---------------~~--------~~~~~e~~~l~~l~~~~~  124 (399)
                      |.+.++||+|+||.||+|.+ .+|+.||||+++....               ..        -....|...+..+.....
T Consensus        97 Y~I~~~IG~Gk~a~VY~a~d-~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv  175 (397)
T 4gyi_A           97 YSVGSRIGVGKESDIMIVAD-EKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF  175 (397)
T ss_dssp             SEEEEEEEECSSEEEEEEEC-TTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             EEecCEeeeCCceEEEEEEC-CCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence            99999999999999999987 4689999999753110               00        112245666666654211


Q ss_pred             CCCcceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEe
Q 015867          125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLV  203 (399)
Q Consensus       125 ~~~~~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~  203 (399)
                          .+...++.    ...+|||||+ |.+|.++.        ....+..++.||+.+|.+||+.|||||||||.|||+.
T Consensus       176 ----~vp~p~~~----~~~~LVME~i~G~~L~~l~--------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~  239 (397)
T 4gyi_A          176 ----PVPEPIAQ----SRHTIVMSLVDALPMRQVS--------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIR  239 (397)
T ss_dssp             ----SCCCEEEE----ETTEEEEECCSCEEGGGCC--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE
T ss_pred             ----CCCeeeec----cCceEEEEecCCccHhhhc--------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEe
Confidence                11222221    2247999999 77775432        1223467899999999999999999999999999998


Q ss_pred             ecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcc
Q 015867          204 SSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA  241 (399)
Q Consensus       204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~  241 (399)
                      .++....+.              .....+.|+||+-+.
T Consensus       240 ~dgd~~d~~--------------~~~~~~~iID~~Q~V  263 (397)
T 4gyi_A          240 EEKDAEDPS--------------SITLTPIIIXFPQMV  263 (397)
T ss_dssp             EEECSSCTT--------------SEEEEEEECCCTTCE
T ss_pred             CCCCccccc--------------ccccceEEEEeCCcc
Confidence            765211100              112248899999664

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=99.39  E-value=1.8e-12  Score=116.83  Aligned_cols=108  Identities=10%  Similarity=0.066  Sum_probs=83.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +.|++...++.|+.+.||++..  .+..+++|+..... .....+..|.++++.+..     +..++++++++.+.+..|
T Consensus        14 ~~~~~~~~~~g~s~~~v~~~~~--~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~-----~~~vP~v~~~~~~~~~~~   86 (263)
T 3tm0_A           14 EKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG-----KLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             TTSEEEECCSCCSSSEEEEEEC--SSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT-----TSCCCCEEEEEEETTEEE
T ss_pred             ccceeEeeccCCCCCeEEEEEC--CCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhc-----CCCCCeEEEEEecCCceE
Confidence            3589999999999999999864  36789999986422 223457889999999864     245777888888888999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD  187 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~  187 (399)
                      +|||++ |.+|.+.+.       +......++.+++.+|..||+
T Consensus        87 lv~e~i~G~~l~~~~~-------~~~~~~~~~~~l~~~l~~LH~  123 (263)
T 3tm0_A           87 LLMSEADGVLCSEEYE-------DEQSPEKIIELYAECIRLFHS  123 (263)
T ss_dssp             EEEECCSSEEHHHHCC-------TTTCHHHHHHHHHHHHHHHHH
T ss_pred             EEEEecCCeehhhccC-------CcccHHHHHHHHHHHHHHHhC
Confidence            999999 888876531       112234688999999999998

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=99.23  E-value=3.4e-11  Score=108.05  Aligned_cols=107  Identities=14%  Similarity=0.083  Sum_probs=73.2

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ..|.+....+.|..+.||++.. .+|..+++|+....  ....+..|..+++.+.+. .   -.+++++.+....+..++
T Consensus        20 ~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~--~~~~~~~E~~~l~~l~~~-~---~~vP~~~~~~~~~~~~~~   92 (264)
T 1nd4_A           20 FGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG--ALNELQDEAARLSWLATT-G---VPCAAVLDVVTEAGRDWL   92 (264)
T ss_dssp             TTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC--TTSCHHHHHHHHHHHHTT-T---CCBCCEEEEEECSSCEEE
T ss_pred             CCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc--cchhhhHHHHHHHHHHhC-C---CCCCeEEEeccCCCCCEE
Confidence            3466655545666799999854 45677999997653  234577899999999753 1   235667777777788999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR  189 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g  189 (399)
                      ||||+ |.+|.  ..     ....   ..++.+++..|..||+..
T Consensus        93 v~e~i~G~~l~--~~-----~~~~---~~~~~~l~~~l~~lh~~~  127 (264)
T 1nd4_A           93 LLGEVPGQDLL--SS-----HLAP---AEKVSIMADAMRRLHTLD  127 (264)
T ss_dssp             EEECCSSEETT--TS-----CCCH---HHHHHHHHHHHHHHTTSC
T ss_pred             EEEecCCcccC--cC-----cCCH---hHHHHHHHHHHHHHhCCC
Confidence            99999 77773  11     1221   256777778888888643

>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A

Probab=99.16  E-value=5.1e-11  Score=109.80  Aligned_cols=183  Identities=18%  Similarity=0.200  Sum_probs=119.2

Q ss_pred             eeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC---eEEEEEc
Q 015867           72 SKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN---HICIVFE  148 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~---~~~lv~e  148 (399)
                      +.++.|....||++.     ..+++|+.... .....+..|.++++.+.......   +..++......+   ..|+||+
T Consensus        26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~~-~~~~~~~~E~~~l~~l~~~~~v~---vP~~~~~~~~~~~~~~~~~vm~   96 (304)
T 3sg8_A           26 EISGEGNDCIAYEIN-----RDFIFKFPKHS-RGSTNLFNEVNILKRIHNKLPLP---IPEVVFTGMPSETYQMSFAGFT   96 (304)
T ss_dssp             CEEEECSSEEEEEST-----TSEEEEEESSH-HHHHHHHHHHHHHHHHTTSSSSC---CCCEEEECCCCSSCSCSCEEEE
T ss_pred             EecCCCCcceEEEEC-----CEEEEEecCCc-chHHHHHHHHHHHHHHHhcCCCC---CCceEeecCCCCCCCcceEEEc
Confidence            448999999999763     34899986543 33466788999999886533322   333444333332   4589999


Q ss_pred             cC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH----------------------------------------
Q 015867          149 KL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD----------------------------------------  187 (399)
Q Consensus       149 ~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~----------------------------------------  187 (399)
                      ++ |.+|.+....    .++......++.|++..|..||+                                        
T Consensus        97 ~i~G~~l~~~~~~----~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  172 (304)
T 3sg8_A           97 KIKGVPLTPLLLN----NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK  172 (304)
T ss_dssp             CCCCEECCHHHHH----TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred             ccCCeECCccccc----cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence            99 7777653322    36777788888899988888886                                        


Q ss_pred             ------------------CCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcc
Q 015867          188 ------------------LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSS  249 (399)
Q Consensus       188 ------------------~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~  249 (399)
                                        ..++|+|++|.||+++.+                      ....+.|+||+.+....... .
T Consensus       173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~----------------------~~~~~~~iD~~~~~~~~~~~-D  229 (304)
T 3sg8_A          173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTE----------------------KNTICGIIDFGDAAISDPDN-D  229 (304)
T ss_dssp             HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETT----------------------TTEEEEECCCTTCEEECTTH-H
T ss_pred             HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCC----------------------CCCEEEEEeCCCCccCChHH-H
Confidence                              136999999999999531                      13457899999876533211 1


Q ss_pred             cccCCCc---cchhhhhC--CCC------------CCcchhHHHHHHHHHHHhCCCCC
Q 015867          250 IVSTRHY---RAPEVILG--LGW------------SYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       250 ~~gt~~y---~aPE~~~~--~~~------------~~~~DiwslG~il~ell~g~~Pf  290 (399)
                      ......+   ..|+....  ..|            ..-.+.|+++.++|.+.+|..+|
T Consensus       230 l~~~~~~~~~~~~~~~~~~l~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~  287 (304)
T 3sg8_A          230 FISLMEDDEEYGMEFVSKILNHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDW  287 (304)
T ss_dssp             HHTTCCTTTSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred             HHHHHhhccccCHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHH
Confidence            1111111   23333221  011            11258999999999999998776

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=99.13  E-value=1.7e-10  Score=108.84  Aligned_cols=108  Identities=12%  Similarity=0.113  Sum_probs=76.0

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEe--cch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC---Ce
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR---NH  142 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~--~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~---~~  142 (399)
                      .++.|+.|.++.||++...  +..+++|+..  ...  .....+..|..+++.+...    ...+++++.++.+.   +.
T Consensus        42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~----~vpvP~~~~~~~~~~~~g~  115 (359)
T 3dxp_A           42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGT----DVPVAKMYALCEDESVIGR  115 (359)
T ss_dssp             EEEECCC-CCSCEEEEECS--SCEEEEECCCC----------CHHHHHHHHHHHTTS----SSCCCCEEEEECCTTTTSS
T ss_pred             eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcC----CCCCCcEEEECCCCCccCC
Confidence            4677999999999998653  4578899875  322  1234677899999999762    23567777777665   56


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD  187 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~  187 (399)
                      .|+||||+ |..+.+.    ....++......++.+++..|..||+
T Consensus       116 ~~~vme~v~G~~l~~~----~~~~l~~~~~~~~~~~l~~~La~LH~  157 (359)
T 3dxp_A          116 AFYIMEFVSGRVLWDQ----SLPGMSPAERTAIYDEMNRVIAAMHT  157 (359)
T ss_dssp             CEEEEECCCCBCCCCT----TCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEecCCeecCCC----ccccCCHHHHHHHHHHHHHHHHHHhC
Confidence            89999999 6665431    11136788888999999999999997

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=98.71  E-value=2.2e-07  Score=85.45  Aligned_cols=104  Identities=18%  Similarity=0.106  Sum_probs=66.1

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee-ccCCeEEEEEcc
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF-DYRNHICIVFEK  149 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~-~~~~~~~lv~e~  149 (399)
                      ++.++.|....||+.     +..+++|+... ......+..|.++++.+.+....   .+..++.+. ...+..++||++
T Consensus        24 v~~l~~G~~n~v~~v-----g~~~VlR~~~~-~~~~~~~~~E~~~L~~L~~~~~v---~VP~~~~~~~~~~g~~~~v~e~   94 (306)
T 3tdw_A           24 VESLGEGFRNYAILV-----NGDWVFRFPKS-QQGADELNKEIQLLPLLVGCVKV---NIPQYVYIGKRSDGNPFVGYRK   94 (306)
T ss_dssp             EEEEEECSSEEEEEE-----TTTEEEEEESS-HHHHHHHHHHHHHHHHHTTTCSS---BCCCEEEEEECTTSCEEEEEEC
T ss_pred             eeecCCCcceeEEEE-----CCEEEEEecCC-chHHHHHHHHHHHHHHHHhcCCC---CCCCeEeecccCCCceEEEEec
Confidence            345788888899987     45588998543 23346788899999999864222   244444444 345677899999


Q ss_pred             C-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Q 015867          150 L-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD  187 (399)
Q Consensus       150 ~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~  187 (399)
                      + |.++.+..-.    .++......++.++...|..||+
T Consensus        95 i~G~~l~~~~~~----~l~~~~~~~~~~~lg~~La~LH~  129 (306)
T 3tdw_A           95 VQGQILGEDGMA----VLPDDAKDRLALQLAEFMNELSA  129 (306)
T ss_dssp             CCSEECHHHHHT----TSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCeECchhhhh----hCCHHHHHHHHHHHHHHHHHHhc
Confidence            9 7777653211    24445555555555555555554

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=98.60  E-value=4.3e-07  Score=81.70  Aligned_cols=101  Identities=13%  Similarity=0.174  Sum_probs=69.2

Q ss_pred             eeccccce-EEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-
Q 015867           73 KMGEGTFG-RVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-  150 (399)
Q Consensus        73 ~lG~G~~g-~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-  150 (399)
                      .+..|..| .||+......+..+++|+....  ....+..|..+++.+...     --+.+++.+..+.+..++|||++ 
T Consensus        31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~--~~~~~~~E~~~l~~l~~~-----vPVP~v~~~~~~~~~~~lvme~l~  103 (272)
T 4gkh_A           31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS--VANDVTDEMVRLNWLTAF-----MPLPTIKHFIRTPDDAWLLTTAIP  103 (272)
T ss_dssp             EEECSSSSCEEEEEECCTTCCCEEEEEEETH--HHHHHHHHHHHHHHHTTT-----SCCCCEEEEEEETTEEEEEEECCC
T ss_pred             EccCCCcCCeEEEEEecCCCeEEEEEECCCC--CHhHHHHHHHHHHHhccC-----CCcCeEEEEEEECCeEEEEEEeeC
Confidence            34445554 7898877777778999987643  345677899999988641     23667778888889999999999 


Q ss_pred             CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Q 015867          151 GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH  186 (399)
Q Consensus       151 ~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH  186 (399)
                      |.++.+......      .....+..++...|..||
T Consensus       104 G~~~~~~~~~~~------~~~~~~~~~l~~~L~~Lh  133 (272)
T 4gkh_A          104 GKTAFQVLEEYP------DSGENIVDALAVFLRRLH  133 (272)
T ss_dssp             SEEHHHHHHHCG------GGHHHHHHHHHHHHHHHH
T ss_pred             CccccccccCCH------HHHHHHHHHHHHHHHHhc
Confidence            778777654321      122345566666666666

>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*

Probab=98.35  E-value=3e-06  Score=80.70  Aligned_cols=77  Identities=19%  Similarity=0.226  Sum_probs=49.0

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecchh--------hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK--------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      -.+.||.|.++.||++....+++.++||.......        .......|.++++.+.....   ..++.++.+  +.+
T Consensus        34 ~~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~---~~vP~~~~~--d~~  108 (397)
T 2olc_A           34 TCQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVP---HLVPRVFYS--DTE  108 (397)
T ss_dssp             EEEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCG---GGSCCEEEE--ETT
T ss_pred             EEEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCC---CCcCeEEEE--cCC
Confidence            35679999999999997665677899998643211        12345678899988865321   234455543  344


Q ss_pred             eEEEEEccCC
Q 015867          142 HICIVFEKLG  151 (399)
Q Consensus       142 ~~~lv~e~~~  151 (399)
                      ..++|||++.
T Consensus       109 ~~~lvmE~l~  118 (397)
T 2olc_A          109 MAVTVMEDLS  118 (397)
T ss_dssp             TTEEEECCCT
T ss_pred             ccEEEEEeCC
Confidence            5689999993

>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}

Probab=98.19  E-value=3.1e-05  Score=71.82  Aligned_cols=77  Identities=13%  Similarity=0.201  Sum_probs=44.8

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeec-e--eeccCCeEEEEE
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR-N--WFDYRNHICIVF  147 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~-~--~~~~~~~~~lv~  147 (399)
                      ++.|+.|..+.||++...  +..+++|+....   ......|..+++.|..... ..|.++... +  +....+..++||
T Consensus        37 ~~~l~gG~~n~~~~v~~~--~~~~vlk~~~~~---~~~~~~e~~~l~~L~~~g~-~vp~~~~~~~g~~~~~~~~~~~~l~  110 (346)
T 2q83_A           37 IDVIQGNQMALVWKVHTD--SGAVCLKRIHRP---EKKALFSIFAQDYLAKKGM-NVPGILPNKKGSLYSKHGSFLFVVY  110 (346)
T ss_dssp             EEECC----CEEEEEEET--TEEEEEEEECSC---HHHHHHHHHHHHHHHHHTC-SSCCBCCCTTSCSCEEETTEEEEEE
T ss_pred             eeeccccccCcEEEEEeC--CCCEEEEecCCC---HHHHHHHHHHHHHHHHcCC-CCCceeecCCCCEEEEECCEEEEEE
Confidence            355677778999998642  345999998652   2344557788888876432 334443311 1  112456789999


Q ss_pred             ccC-CCC
Q 015867          148 EKL-GPS  153 (399)
Q Consensus       148 e~~-~~~  153 (399)
                      +|+ |.+
T Consensus       111 ~~i~G~~  117 (346)
T 2q83_A          111 DWIEGRP  117 (346)
T ss_dssp             ECCCCBC
T ss_pred             EeecCcc
Confidence            999 543

>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*

Probab=98.14  E-value=6.3e-06  Score=77.21  Aligned_cols=84  Identities=11%  Similarity=0.073  Sum_probs=55.3

Q ss_pred             EEEEeee-ccccceEEEEEEEc--c----CCeEEEEEEEecch---h-hhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           68 YKILSKM-GEGTFGRVLECWDR--Q----TQERVAIKVVRSIR---K-YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        68 y~~~~~l-G~G~~g~V~~~~~~--~----~~~~vaiK~~~~~~---~-~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      ....+.| +.|....+|++...  .    ++..+++|+.....   . ....+..|..+++.+.....   ..+.+++.+
T Consensus        22 v~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~---vpvP~v~~~   98 (357)
T 3ats_A           22 VTVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTD---VPVPRVRWI   98 (357)
T ss_dssp             EEEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCC---SCCCCEEEE
T ss_pred             eEEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCC---CCCCcEEEE
Confidence            3456778 88889999987643  1    25678999875432   0 12457789999999986421   235555655


Q ss_pred             eccC---CeEEEEEccC-CCCH
Q 015867          137 FDYR---NHICIVFEKL-GPSL  154 (399)
Q Consensus       137 ~~~~---~~~~lv~e~~-~~~L  154 (399)
                      ..+.   +..++|||++ |.++
T Consensus        99 ~~~~~~~g~~~~v~e~l~G~~l  120 (357)
T 3ats_A           99 ETTGDVLGTPFFLMDYVEGVVP  120 (357)
T ss_dssp             ECSSTTTSSCEEEEECCCCBCC
T ss_pred             ccCCCccCCceEEEEecCCCCh
Confidence            5544   4678999999 5443

>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}

Probab=97.82  E-value=0.00021  Score=65.53  Aligned_cols=77  Identities=21%  Similarity=0.220  Sum_probs=58.3

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      -.+.|+.|.+..+|+...  ++..+++|+....  ....+..|...++.|.....   ..+++++.+....+..++|||+
T Consensus        40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~--~~~~~~~E~~~L~~L~~~~~---v~VP~vl~~~~~~g~~~lvme~  112 (312)
T 3jr1_A           40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS--YRSMFRAEADQLALLAKTNS---INVPLVYGIGNSQGHSFLLLEA  112 (312)
T ss_dssp             EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG--GHHHHHHHHHHHHHHHHTTS---SBCCCEEEEEECSSEEEEEEEC
T ss_pred             eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc--cHHHHHHHHHHHHHHHhhCC---CCcceEEEEeecCCceEEEEEe
Confidence            457799999999999864  4667889987643  34667889999999976422   3566777777777899999999


Q ss_pred             C-CCC
Q 015867          150 L-GPS  153 (399)
Q Consensus       150 ~-~~~  153 (399)
                      + |..
T Consensus       113 l~G~~  117 (312)
T 3jr1_A          113 LNKSK  117 (312)
T ss_dssp             CCCCC
T ss_pred             ccCCC
Confidence            9 554

>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}

Probab=97.77  E-value=0.00013  Score=66.56  Aligned_cols=69  Identities=10%  Similarity=-0.022  Sum_probs=44.2

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL  150 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  150 (399)
                      ++.|+.|....+|++      ..+++|+.............|..+++.+......  |   +++...  .+.-++|+||+
T Consensus        23 i~~l~gG~tN~~~~~------~~~vlR~~~~~~~~~~~r~~E~~~l~~l~~~g~~--P---~~~~~~--~~~~~~v~e~i   89 (301)
T 3dxq_A           23 PLERLGGLTNLVFRA------GDLCLRIPGKGTEEYINRANEAVAAREAAKAGVS--P---EVLHVD--PATGVMVTRYI   89 (301)
T ss_dssp             CEEEESCSSEEEEEE------TTEEEEEECC----CCCHHHHHHHHHHHHHTTSS--C---CEEEEC--TTTCCEEEECC
T ss_pred             eeEcCCcccccccee------eeEEEECCCCCccceeCHHHHHHHHHHHHHcCCC--C---ceEEEE--CCCCEEEEeec
Confidence            577888999999998      3488998864322222345688889888765422  3   334333  33346899999


Q ss_pred             -CC
Q 015867          151 -GP  152 (399)
Q Consensus       151 -~~  152 (399)
                       +|
T Consensus        90 ~~g   92 (301)
T 3dxq_A           90 AGA   92 (301)
T ss_dssp             TTC
T ss_pred             CCC
Confidence             55

>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}

Probab=97.64  E-value=0.00023  Score=68.18  Aligned_cols=76  Identities=17%  Similarity=0.280  Sum_probs=46.4

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecc-----hh---hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI-----RK---YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~---~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      -++.||.|..+.||++..  +++.++||.....     ..   .......|.+++..+....   ...+++++.+.  .+
T Consensus        38 ~i~~l~~G~~n~vyrv~~--~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~---~~~vP~v~~~~--~~  110 (420)
T 2pyw_A           38 VIKEVGDGNLNFVFIVVG--SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLS---PDHVPEVYHFD--RT  110 (420)
T ss_dssp             EEEECCCSSSCEEEEEEC--SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHS---GGGSCCEEEEE--TT
T ss_pred             EEEEccCCCcEEEEEEEc--CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhC---CCCCCeEEEEC--CC
Confidence            356789999999999853  4667999943211     11   0122344555555554321   13455666554  46


Q ss_pred             eEEEEEccC-CC
Q 015867          142 HICIVFEKL-GP  152 (399)
Q Consensus       142 ~~~lv~e~~-~~  152 (399)
                      ..++|||++ ++
T Consensus       111 ~~~lv~e~l~~g  122 (420)
T 2pyw_A          111 MALIGMRYLEPP  122 (420)
T ss_dssp             TTEEEECCCCTT
T ss_pred             ccEEEEeecCCc
Confidence            779999999 76

>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}

Probab=97.52  E-value=0.00073  Score=61.01  Aligned_cols=76  Identities=11%  Similarity=0.040  Sum_probs=53.2

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      +..-++.+|.|..+.||+... .+|+.|.+|+..... .....+..|...|+.|........|   +++.+.    ..++
T Consensus        16 ~v~~v~~~g~G~~~~vyrv~l-~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP---~v~~~~----~~~l   87 (288)
T 3f7w_A           16 EVAAVAERGHSHRWHLYRVEL-ADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVP---QVAGWD----DRTL   87 (288)
T ss_dssp             CEEEEEEEEEETTEEEEEEEE-TTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSC---CEEEEE----TTEE
T ss_pred             CeEEEEecCCCCCeEEEEEEE-CCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcc---eEEecc----CceE
Confidence            466778899999999999965 567889999865432 2234577899999999764433333   344332    2378


Q ss_pred             EEccC
Q 015867          146 VFEKL  150 (399)
Q Consensus       146 v~e~~  150 (399)
                      |||++
T Consensus        88 v~e~l   92 (288)
T 3f7w_A           88 AMEWV   92 (288)
T ss_dssp             EEECC
T ss_pred             EEEee
Confidence            99998

>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}

Probab=97.50  E-value=0.00056  Score=63.16  Aligned_cols=78  Identities=13%  Similarity=0.066  Sum_probs=39.7

Q ss_pred             eeeccccceE-EEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC
Q 015867           72 SKMGEGTFGR-VLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL  150 (399)
Q Consensus        72 ~~lG~G~~g~-V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~  150 (399)
                      +.|+.|+... +|+... .+++.+++|......  ......|..+++.+.... .   .+++++.+....+  ++|||++
T Consensus        24 ~~l~gg~s~~~~~r~~~-~~~~~~vlk~~~~~~--~~~~~~e~~~l~~L~~~g-~---~vP~v~~~d~~~g--~ll~e~l   94 (333)
T 3csv_A           24 TPLAGDASSRRYQRLRS-PTGAKAVLMDWSPEE--GGDTQPFVDLAQYLRNLD-I---SAPEIYAEEHARG--LLLIEDL   94 (333)
T ss_dssp             CC--------CCEEEEC-TTCCEEEEEECCTTT--TCCSHHHHHHHHHHHHTT-C---BCCCEEEEETTTT--EEEECCC
T ss_pred             eECCCCCCCceEEEEEc-CCCCeEEEEECCCCC--CccccHHHHHHHHHHhCC-C---CCCceeeecCCCC--EEEEeeC
Confidence            3455554444 556542 225567777654321  134556888888887642 1   3445554433333  6899999


Q ss_pred             -CCCHHHHH
Q 015867          151 -GPSLFDFL  158 (399)
Q Consensus       151 -~~~L~~~l  158 (399)
                       +.++.+++
T Consensus        95 ~~~~l~~~l  103 (333)
T 3csv_A           95 GDALFTEVI  103 (333)
T ss_dssp             CSCBHHHHH
T ss_pred             CCcchHHHh
Confidence             55665444

>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*

Probab=97.40  E-value=0.00025  Score=66.80  Aligned_cols=73  Identities=14%  Similarity=0.124  Sum_probs=43.5

Q ss_pred             eeeccccceEEEEEEEcc-------CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           72 SKMGEGTFGRVLECWDRQ-------TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +.|..|-...+|++....       +++.|++|+.............|.++++.+.....     ..+++..+.+    .
T Consensus        56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~~~~~~~~rE~~vl~~L~~~gv-----~P~ll~~~~~----g  126 (379)
T 3feg_A           56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSL-----GPQLYGVFPE----G  126 (379)
T ss_dssp             EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC---CCHHHHHHHHHHHHHHHHTTS-----SCCEEEEETT----E
T ss_pred             EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCccchHHHHHHHHHHHHHHHhcCC-----CCeEEEEcCC----c
Confidence            457677778889887532       34679999864322234556689999999987543     2445555543    2


Q ss_pred             EEEccC-CCC
Q 015867          145 IVFEKL-GPS  153 (399)
Q Consensus       145 lv~e~~-~~~  153 (399)
                      +||||+ |.+
T Consensus       127 ~v~e~i~G~~  136 (379)
T 3feg_A          127 RLEQYIPSRP  136 (379)
T ss_dssp             EEEECCSEEE
T ss_pred             cEEEEecCcc
Confidence            999999 533

>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6

Probab=97.36  E-value=0.0019  Score=59.21  Aligned_cols=82  Identities=10%  Similarity=0.059  Sum_probs=47.4

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeec-e--eeccCCeEE
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR-N--WFDYRNHIC  144 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~-~--~~~~~~~~~  144 (399)
                      ..-++.|+.|....+|++... ++ .+++|+.... ........|..+++.+.... ...|.++... +  +....+..+
T Consensus        24 ~~~~~~i~~G~~n~~~~v~~~-~g-~~vlk~~~~~-~~~~~l~~e~~~l~~L~~~g-~~vP~~~~~~~g~~~~~~~g~~~   99 (322)
T 2ppq_A           24 LTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKG-LSCPLPLPRKDGELLGELSGRPA   99 (322)
T ss_dssp             EEEEEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTT-CCCCCBCCBTTCCSCEEETTEEE
T ss_pred             ceEeeccCCCcccceEEEEeC-Cc-cEEEEEeCCC-CCHHHHHHHHHHHHHHHHCC-CCCCcccCCCCCCEEEEECCEEE
Confidence            345677888988999998643 33 5889988652 12244567888999887643 2223333211 0  112246679


Q ss_pred             EEEccC-CCC
Q 015867          145 IVFEKL-GPS  153 (399)
Q Consensus       145 lv~e~~-~~~  153 (399)
                      +||+++ |..
T Consensus       100 ~l~~~l~G~~  109 (322)
T 2ppq_A          100 ALISFLEGMW  109 (322)
T ss_dssp             EEEECCCCBC
T ss_pred             EEEEeCCCcC
Confidence            999999 543

>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6

Probab=97.35  E-value=0.0018  Score=59.43  Aligned_cols=74  Identities=18%  Similarity=0.227  Sum_probs=46.8

Q ss_pred             eeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeecee-----eccCCeEEEEE
Q 015867           73 KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW-----FDYRNHICIVF  147 (399)
Q Consensus        73 ~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~-----~~~~~~~~lv~  147 (399)
                      .++ |....||++.. .+|+.+++|+.+...........|..+++.+.... ..   ++.++..     ....+..++||
T Consensus        33 ~l~-g~~n~~y~v~~-~~g~~~vlK~~~~~~~~~~~~~~E~~~~~~L~~~g-~~---vp~~~~~~g~~~~~~~g~~~~l~  106 (328)
T 1zyl_A           33 PLN-SYENRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDE-VP---VAAPVAFNGQTLLNHQGFYFAVF  106 (328)
T ss_dssp             EEC-CSSSEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTT-CS---BCCCCCBTTBSCEEETTEEEEEE
T ss_pred             eec-CcccceEEEEc-CCCCEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcC-Ce---ecceeecCCcEEEEECCEEEEEE
Confidence            455 77789998753 34667999998643223456667889999887642 12   3333322     12256778999


Q ss_pred             ccCCC
Q 015867          148 EKLGP  152 (399)
Q Consensus       148 e~~~~  152 (399)
                      ++++|
T Consensus       107 ~~i~G  111 (328)
T 1zyl_A          107 PSVGG  111 (328)
T ss_dssp             ECCCC
T ss_pred             EecCC
Confidence            99943

>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A

Probab=97.28  E-value=0.002  Score=55.01  Aligned_cols=101  Identities=14%  Similarity=-0.019  Sum_probs=61.9

Q ss_pred             CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCc
Q 015867          153 SLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSA  231 (399)
Q Consensus       153 ~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (399)
                      +|.++|+..+. ++++.+++.++.|.+.+|.-+=. ..-..+=+-|..|+|..+|                        .
T Consensus        34 SL~eIL~~~~~-PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG------------------------~   88 (229)
T 2yle_A           34 SLEEILRLYNQ-PINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDG------------------------A   88 (229)
T ss_dssp             EHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTS------------------------C
T ss_pred             cHHHHHHHcCC-CcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCC------------------------c
Confidence            79999987765 79999999999999999887621 1212333446788875444                        4


Q ss_pred             eEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          232 IKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       232 ~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                      |.+.+ +.+         ......+.+||... ...+.+.=|||||+++|..+--..|
T Consensus        89 V~f~~-~~s---------~~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~  135 (229)
T 2yle_A           89 VTLAP-AAD---------DAGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK  135 (229)
T ss_dssp             EEECC-C---------------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred             eeccc-ccc---------cccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence            44332 111         01233456777652 3445677899999999998874433

>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*

Probab=97.14  E-value=0.0011  Score=62.30  Aligned_cols=73  Identities=18%  Similarity=0.186  Sum_probs=42.8

Q ss_pred             EeeeccccceEEEEEEEcc--------CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           71 LSKMGEGTFGRVLECWDRQ--------TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~--------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++.|+.|....+|++....        .+..+++|+.............|..+++.+.....     +++++..+.    
T Consensus        38 ~~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~~~~~~~E~~~l~~L~~~g~-----~P~~~~~~~----  108 (369)
T 3c5i_A           38 VKQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDELYNTISEFEVYKTMSKYKI-----APQLLNTFN----  108 (369)
T ss_dssp             EEEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGGTSCHHHHHHHHHHHHHTTS-----SCCEEEEET----
T ss_pred             EEEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccceecHHHHHHHHHHHHhcCC-----CCceEEecC----
Confidence            4567888888999987543        12578899875432221224578899999876431     334444332    


Q ss_pred             EEEEEccC-CC
Q 015867          143 ICIVFEKL-GP  152 (399)
Q Consensus       143 ~~lv~e~~-~~  152 (399)
                      -++||+|+ |.
T Consensus       109 ~~~v~e~i~G~  119 (369)
T 3c5i_A          109 GGRIEEWLYGD  119 (369)
T ss_dssp             TEEEEECCCSE
T ss_pred             CcEEEEEecCC
Confidence            26899999 53

>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8

Probab=97.07  E-value=0.0013  Score=62.98  Aligned_cols=71  Identities=13%  Similarity=0.139  Sum_probs=47.5

Q ss_pred             EEeeeccccceEEEEEEEcc-------CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           70 ILSKMGEGTFGRVLECWDRQ-------TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      -++.|+.|....||++....       .+..+++|+.... .....+..|..+++.+.....     .+++++.+.+   
T Consensus        77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~~~~li~E~~~l~~L~~~g~-----~P~l~~~~~~---  147 (429)
T 1nw1_A           77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ETESHLVAESVIFTLLSERHL-----GPKLYGIFSG---  147 (429)
T ss_dssp             EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CCHHHHHHHHHHHHHHHHTTS-----SSCEEEEETT---
T ss_pred             EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-CcHHHHHHHHHHHHHHHhCCC-----CCcEEEEeCC---
Confidence            45678888889999997542       2567999988431 111445579999999886432     2445554442   


Q ss_pred             EEEEEccC
Q 015867          143 ICIVFEKL  150 (399)
Q Consensus       143 ~~lv~e~~  150 (399)
                       .+||||+
T Consensus       148 -g~v~e~l  154 (429)
T 1nw1_A          148 -GRLEEYI  154 (429)
T ss_dssp             -EEEECCC
T ss_pred             -CEEEEEe
Confidence             2899998

>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}

Probab=96.89  E-value=0.0043  Score=59.91  Aligned_cols=73  Identities=14%  Similarity=0.078  Sum_probs=45.9

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEcc
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEK  149 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~  149 (399)
                      -++.|+.|-...+|++.....+..+++|+.............|..+++.|....     ..++++..+..    .+||||
T Consensus       112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~idR~~E~~vl~~L~~~g-----l~P~ll~~~~~----G~v~e~  182 (458)
T 2qg7_A          112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEIINREREKKISCILYNKN-----IAKKIYVFFTN----GRIEEF  182 (458)
T ss_dssp             EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCSCHHHHHHHHHHHTTSS-----SBCCEEEEETT----EEEEEC
T ss_pred             EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhcCHHHHHHHHHHHHhcC-----CCCCEEEEeCC----eEEEEe
Confidence            456788888899999976544578999987542211112257899999987633     23455565532    259999


Q ss_pred             C-C
Q 015867          150 L-G  151 (399)
Q Consensus       150 ~-~  151 (399)
                      + |
T Consensus       183 I~G  185 (458)
T 2qg7_A          183 MDG  185 (458)
T ss_dssp             CCS
T ss_pred             eCC
Confidence            8 5

>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*

Probab=96.86  E-value=0.0086  Score=55.38  Aligned_cols=70  Identities=11%  Similarity=0.127  Sum_probs=43.9

Q ss_pred             ccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeecee------eccCCeEEEEEc
Q 015867           75 GEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW------FDYRNHICIVFE  148 (399)
Q Consensus        75 G~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~------~~~~~~~~lv~e  148 (399)
                      |.|....||++.. .+| .+++|+.....     ...|..+++.|.....   ++++..+..      ....+..++||+
T Consensus        32 G~g~~N~vy~v~~-~~g-~~vLK~~~~~~-----~~~E~~~l~~L~~~g~---~~vp~pi~~~~G~~~~~~~g~~~~l~~  101 (339)
T 3i1a_A           32 GADTNAFAYQADS-ESK-SYFIKLKYGYH-----DEINLSIIRLLHDSGI---KEIIFPIHTLEAKLFQQLKHFKIIAYP  101 (339)
T ss_dssp             TSCSSCEEEEEEC-SSC-EEEEEEEECSS-----CCHHHHHHHHHHHTTC---CSSCCCCCCTTSCSSEECSSEEEEEEE
T ss_pred             cCccccceEEEEe-CCC-CEEEEEecCcc-----chHHHHHHHHHHhcCC---cccccceecCCCCEEEEECCEEEEEEe
Confidence            3444689999864 345 79999876533     2467888888876422   223333321      223578899999


Q ss_pred             cC-CCCH
Q 015867          149 KL-GPSL  154 (399)
Q Consensus       149 ~~-~~~L  154 (399)
                      |+ |..+
T Consensus       102 ~i~G~~~  108 (339)
T 3i1a_A          102 FIHAPNG  108 (339)
T ss_dssp             CCCCCBT
T ss_pred             ccCCCcC
Confidence            99 6543

>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}

Probab=95.79  E-value=0.016  Score=55.19  Aligned_cols=75  Identities=13%  Similarity=0.092  Sum_probs=47.3

Q ss_pred             EEeeeccccceEEEEEEEccC-------CeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           70 ILSKMGEGTFGRVLECWDRQT-------QERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~-------~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      -++.|..|-...+|++.....       ++.|++|+.............|..+++.+.....     ..++++.+.    
T Consensus        74 ~v~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~idR~~E~~~l~~L~~~gi-----~P~l~~~~~----  144 (424)
T 3mes_A           74 EVKQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKFYDSKVELDVFRYLSNINI-----APNIIADFP----  144 (424)
T ss_dssp             EEEEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CCCCHHHHHHHHHHHHHTTS-----SCCEEEEET----
T ss_pred             EEEEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchhcCHHHHHHHHHHHHhcCC-----CCCEEEEcC----
Confidence            345677777889999876421       5679999875432222234578999999886432     334444332    


Q ss_pred             EEEEEccC-CCC
Q 015867          143 ICIVFEKL-GPS  153 (399)
Q Consensus       143 ~~lv~e~~-~~~  153 (399)
                      -++||+|+ |.+
T Consensus       145 ~~~I~efI~G~~  156 (424)
T 3mes_A          145 EGRIEEFIDGEP  156 (424)
T ss_dssp             TEEEEECCCSEE
T ss_pred             CCEEEEEeCCcc
Confidence            27899999 543

>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*

Probab=93.78  E-value=0.26  Score=46.48  Aligned_cols=34  Identities=29%  Similarity=0.442  Sum_probs=25.4

Q ss_pred             ccccCCCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcc
Q 015867          190 LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA  241 (399)
Q Consensus       190 ivH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~  241 (399)
                      ++|+|+.+.|||+..+..                  .+....+.++||..|.
T Consensus       246 fcHnDl~~gNil~~~~~~------------------~~~~~~l~vIDwEya~  279 (401)
T 3g15_A          246 FCHNDCQEGNILLLEGRE------------------NSEKQKLMLIDFEYSS  279 (401)
T ss_dssp             EECSCCCGGGEEEETTGG------------------GCSSCCEEECCCTTCE
T ss_pred             eEEecCCCCeEEEecCcc------------------cCcCCeEEEechHhcc
Confidence            679999999999954320                  1246679999998764

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	399
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	4e-61
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	4e-56
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	1e-55
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	2e-54
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-54
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	2e-53
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-53
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	6e-53
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	9e-53
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	9e-53
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	2e-52
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-52
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	7e-52
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-51
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	2e-50
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	3e-50
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	4e-50
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	4e-49
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	7e-49
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-48
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	1e-48
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	3e-48
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-48
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	2e-47
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-46
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	4e-46
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	8e-46
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	3e-45
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	3e-45
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-44
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	9e-44
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	7e-43
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	3e-41
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	5e-41
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-41
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-40
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	1e-38
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	5e-37
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	6e-36
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	4e-33
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	7e-33
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	8e-33
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-32
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	4e-31
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	5e-31
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	3e-30
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	5e-30
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	9e-30
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	5e-29
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-28
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-28
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	6e-28
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	9e-28
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	4e-27
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	6e-27
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-27
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	2e-26
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	3e-26
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	4e-26
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	2e-25
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	2e-24
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	2e-24
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	8e-16

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  198 bits (504), Expect = 4e-61
 Identities = 73/337 (21%), Positives = 126/337 (37%), Gaps = 43/337 (12%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDK 124
            ++ +S++G G  G V +   + +   +A K++        R+  + E+ VL        
Sbjct: 7   DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECN---- 62

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
             S + V     F     I I  E + G SL   LK+      P  ++ +    +++ + 
Sbjct: 63  --SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLT 118

Query: 184 YMHD-LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-STA 241
           Y+ +  +++H D+KP NIL+             +S GE           IKL DFG S  
Sbjct: 119 YLREKHKIMHRDVKPSNILV-------------NSRGE-----------IKLCDFGVSGQ 154

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             +   +S V TR Y +PE + G  +S   D+WS+G  LVE+  G       +  E   M
Sbjct: 155 LIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELM 214

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
               +         R           G     P       +I  +      +    L   
Sbjct: 215 FGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPP------MAIFELLDYIVNEPPPKLPSG 268

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
                  D ++  L  +P+ER   +Q + H F +  +
Sbjct: 269 VFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 305

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  186 bits (472), Expect = 4e-56
 Identities = 96/346 (27%), Positives = 168/346 (48%), Gaps = 42/346 (12%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHL-----AK 121
           RY ++ K+G G F  V    D      VA+K+VR  + Y +AA  EI +LQ +      K
Sbjct: 14  RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 73

Query: 122 NDKGGSSHCVQIRNWFDYRN----HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
            D  G++H +++ + F+++     H+ +VFE LG +L   +K+ ++   P+  V++  +Q
Sbjct: 74  EDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQ 133

Query: 178 LLESVAYMHDLR-LIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
           LL  + YMH    +IHTD+KPEN+L+   +                         IK+ D
Sbjct: 134 LLLGLDYMHRRCGIIHTDIKPENVLMEIVD------------------SPENLIQIKIAD 175

Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE-- 294
            G+  + ++++++ + TR YR+PEV+LG  W    D+WS  C++ EL TG+ LF+  E  
Sbjct: 176 LGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGH 235

Query: 295 ----NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD 350
               + +H+A +   LG LP +++R        +  RG   N  +             L+
Sbjct: 236 SYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISK--------LKFWPLE 287

Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
            +              ++D L  +L+ DP +R  A   +NHP+ ++
Sbjct: 288 DVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKD 333

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  183 bits (465), Expect = 1e-55
 Identities = 84/337 (24%), Positives = 144/337 (42%), Gaps = 51/337 (15%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQER-VAIKVVR---SIRKYRDAAMIEIDVLQHLAKN 122
           +Y+ ++++GEG +G+V +  D +   R VA+K VR          + + E+ VL+HL   
Sbjct: 8   QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 67

Query: 123 DKGG--SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           +         V   +  D    + +VFE +   L  +L +      P + +++   QLL 
Sbjct: 68  EHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLR 127

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            + ++H  R++H DLKP+NIL+ SS  IK                      +        
Sbjct: 128 GLDFLHSHRVVHRDLKPQNILVTSSGQIK----------------------LADFGLARI 165

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
                  +S+V T  YRAPEV+L   ++ P D+WSVGCI  E+   + LF+   +++ L 
Sbjct: 166 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLG 225

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            +   +G   E    R      + F   S     +                        V
Sbjct: 226 KILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEK-----------------------FV 262

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                   DLL   L ++P++R++A  AL+HP+F++L
Sbjct: 263 TDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDL 299

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  181 bits (461), Expect = 2e-54
 Identities = 70/337 (20%), Positives = 122/337 (36%), Gaps = 79/337 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKNDKG 125
            Y IL ++G G FG V  C ++ T      K +       +     EI ++  L      
Sbjct: 30  YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH----- 84

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
                + + + F+ +  + ++ E L G  LFD +    Y       V  + RQ  E + +
Sbjct: 85  -HPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKH 142

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-- 242
           MH+  ++H D+KPENI+                          K+S++K+IDFG      
Sbjct: 143 MHEHSIVHLDIKPENIMC----------------------ETKKASSVKIIDFGLATKLN 180

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
            ++      +T  + APE++      +  DMW++G +   L +G + F   ++LE L  +
Sbjct: 181 PDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNV 240

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
           +R      E      S                                            
Sbjct: 241 KRCDWEFDEDAFSSVS-------------------------------------------- 256

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                 D +  LL+ +P +RLT   AL HP+ +  + 
Sbjct: 257 --PEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS 291

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  181 bits (461), Expect = 2e-54
 Identities = 78/336 (23%), Positives = 123/336 (36%), Gaps = 79/336 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKG 125
            Y I  ++G G FG V    +R T    A K V +     ++    EI  +  L      
Sbjct: 27  HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR----- 81

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
                V + + F+  N + +++E + G  LF+ +   ++     D   E+ RQ+ + + +
Sbjct: 82  -HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVAD-EHNKMSEDEAVEYMRQVCKGLCH 139

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-- 242
           MH+   +H DLKPENI+  +                       +S+ +KLIDFG TA   
Sbjct: 140 MHENNYVHLDLKPENIMFTT----------------------KRSNELKLIDFGLTAHLD 177

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
             Q+      T  + APEV  G    Y  DMWSVG +   L +G + F    + E L  +
Sbjct: 178 PKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNV 237

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
           +     + +      S                                            
Sbjct: 238 KSCDWNMDDSAFSGIS-------------------------------------------- 253

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
                 D +  LL  DP+ R+T  QAL HP+    N
Sbjct: 254 --EDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGN 287

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  179 bits (454), Expect = 2e-53
 Identities = 79/339 (23%), Positives = 138/339 (40%), Gaps = 54/339 (15%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
            Y     +G G+FG V +     + E VAIK V   +++++    E+ +++ L   +   
Sbjct: 21  SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR---ELQIMRKLDHCNIVR 77

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAY 184
             +            ++ +V + +  +++   +         PV  V+ +  QL  S+AY
Sbjct: 78  LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-- 242
           +H   + H D+KP+N+                          P ++ +KL DFGS     
Sbjct: 138 IHSFGICHRDIKPQNL-----------------------LLDPDTAVLKLCDFGSAKQLV 174

Query: 243 DNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
             + + S + +R+YRAPE+I G   ++   D+WS GC+L EL  G+ +F     ++ L  
Sbjct: 175 RGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVE 234

Query: 302 MERALGPLPEHMIRRASRG-TEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
           + + LG      IR  +   TE  F +     W +    R   +A+              
Sbjct: 235 IIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAI-------------- 280

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                    L   LL Y P+ RLT  +A  H FF  L +
Sbjct: 281 --------ALCSRLLEYTPTARLTPLEACAHSFFDELRD 311

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (451), Expect = 4e-53
 Identities = 76/338 (22%), Positives = 135/338 (39%), Gaps = 80/338 (23%)

Query: 67  RYKILSKM-GEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG 125
            YK+ S++ G G  G+VL+ ++++TQE+ A+K+++   K R    +     Q        
Sbjct: 12  DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQC------- 64

Query: 126 GSSHCVQIRNWFDY----RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
              H V+I + ++     R  + IV E L G  LF  ++      F      E  + + E
Sbjct: 65  --PHIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 122

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           ++ Y+H + + H D+KPEN+L  S                        ++ +KL DFG  
Sbjct: 123 AIQYLHSINIAHRDVKPENLLYTSKR---------------------PNAILKLTDFGFA 161

Query: 241 AF--DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
                + + ++   T +Y APEV+    +   CDMWS+G I+  L  G   F ++  L  
Sbjct: 162 KETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI 221

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
              M+  +                    R  +  +P    S  S +              
Sbjct: 222 SPGMKTRI--------------------RMGQYEFPNPEWSEVSEEVK------------ 249

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                      L+  LL+ +P++R+T  + +NHP+   
Sbjct: 250 ----------MLIRNLLKTEPTQRMTITEFMNHPWIMQ 277

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (446), Expect = 6e-53
 Identities = 94/340 (27%), Positives = 152/340 (44%), Gaps = 58/340 (17%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
            ++ + K+GEGT+G V +  ++ T E VA+K +R           A+ EI +L+ L    
Sbjct: 3   NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL---- 58

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                + V++ +     N + +VFE L   L  F+  +     P+ L++ +  QLL+ +A
Sbjct: 59  --NHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 116

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF- 242
           + H  R++H DLKP+N+L                        +    AIKL DFG     
Sbjct: 117 FCHSHRVLHRDLKPQNLL------------------------INTEGAIKLADFGLARAF 152

Query: 243 --DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + ++  V T  YRAPE++LG   +S   D+WS+GCI  E+ T  ALF     ++ L
Sbjct: 153 GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQL 212

Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
             + R LG   E +                   WP      +   +  K  R     S  
Sbjct: 213 FRIFRTLGTPDEVV-------------------WPGVTSMPDYKPSFPKWAR--QDFSKV 251

Query: 360 VDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
           V         LL  +L YDP++R++A+ AL HPFF+++ +
Sbjct: 252 VPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTK 291

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  176 bits (446), Expect = 9e-53
 Identities = 78/343 (22%), Positives = 139/343 (40%), Gaps = 56/343 (16%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
           +Y+ L+K+G+GTFG V +   R+T ++VA+K V        +   A+ EI +LQ L   +
Sbjct: 11  KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 70

Query: 124 KGGSSHCVQIRN--WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   + +   +   +  I +VF+     L   L  N    F +  ++   + LL  
Sbjct: 71  VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAG-LLSNVLVKFTLSEIKRVMQMLLNG 129

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H  +++H D+K  N+L+                         +   +KL DFG   
Sbjct: 130 LYYIHRNKILHRDMKAANVLIT------------------------RDGVLKLADFGLAR 165

Query: 242 F-------DNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTH 293
                       +++ V T  YR PE++LG   +  P D+W  GCI+ E+ T   + Q +
Sbjct: 166 AFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGN 225

Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
                LA++ +  G +   +                 L   +    ++ +KA  +     
Sbjct: 226 TEQHQLALISQLCGSITPEVWPNVD---NYELYEKLELVKGQKRKVKDRLKAYVRDPYAL 282

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                          DL+  LL  DP++R+ +  ALNH FF +
Sbjct: 283 ---------------DLIDKLLVLDPAQRIDSDDALNHDFFWS 310

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  177 bits (449), Expect = 9e-53
 Identities = 86/355 (24%), Positives = 148/355 (41%), Gaps = 53/355 (14%)

Query: 52  REGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKY 105
           R G Y   + +    +   Y+ L  +G G +G V    D +T  +VAIK +        +
Sbjct: 1   RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF 60

Query: 106 RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCP 165
              A  E+ +L+H+   +  G           D      +V   +G  L   +K      
Sbjct: 61  AKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---K 117

Query: 166 FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC 225
              D ++    Q+L+ + Y+H   +IH DLKP N+ +                       
Sbjct: 118 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAV----------------------- 154

Query: 226 LPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELC 284
             +   +K++DFG     +   +  V TR YRAPEVIL  + ++   D+WSVGCI+ E+ 
Sbjct: 155 -NEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMI 213

Query: 285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIK 344
           TG+ LF+  ++L+ L  + +  G  P   ++R      K + +G                
Sbjct: 214 TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKG---------------- 257

Query: 345 AVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
                +  K   +  +  A     +LL  +L  D  +R+TA +AL HP+F +L++
Sbjct: 258 ---LPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLHD 309

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (440), Expect = 2e-52
 Identities = 66/335 (19%), Positives = 125/335 (37%), Gaps = 88/335 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKN 122
            ++I   +G+G FG V    ++Q++  +A+KV+   +            E+++  HL   
Sbjct: 7   DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL--- 63

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                 + +++  +F     + ++ E     +++  L++     F       +  +L  +
Sbjct: 64  ---RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANA 118

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-ST 240
           ++Y H  R+IH D+KPEN+LL S+                          +K+ DFG S 
Sbjct: 119 LSYCHSKRVIHRDIKPENLLLGSA------------------------GELKIADFGWSV 154

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA 300
              +   +++  T  Y  PE+I G       D+WS+G +  E   G+  F+ +   E   
Sbjct: 155 HAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYK 214

Query: 301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV 360
            + R     P+                       EGA                       
Sbjct: 215 RISRVEFTFPDF--------------------VTEGAR---------------------- 232

Query: 361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                   DL+  LL+++PS+R   R+ L HP+  
Sbjct: 233 --------DLISRLLKHNPSQRPMLREVLEHPWIT 259

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (444), Expect = 3e-52
 Identities = 62/337 (18%), Positives = 115/337 (34%), Gaps = 78/337 (23%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAK 121
           + L  +Y I   +G G FG V  C +  +++    K V+     +     EI +L     
Sbjct: 1   KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA-- 58

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                  + + +   F+    + ++FE + G  +F+ +  + +       +  +  Q+ E
Sbjct: 59  ----RHRNILHLHESFESMEELVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCE 113

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
           ++ ++H   + H D++PENI+  +                           IK+I+FG  
Sbjct: 114 ALQFLHSHNIGHFDIRPENIIYQTRRSST----------------------IKIIEFGQA 151

Query: 241 AF--DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
                  N   + +   Y APEV      S   DMWS+G ++  L +G   F    N + 
Sbjct: 152 RQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI 211

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
           +  +  A     E   +  S                                        
Sbjct: 212 IENIMNAEYTFDEEAFKEIS---------------------------------------- 231

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                     D +  LL  +   R+TA +AL HP+ +
Sbjct: 232 ------IEAMDFVDRLLVKERKSRMTASEALQHPWLK 262

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  172 bits (438), Expect = 7e-52
 Identities = 77/348 (22%), Positives = 123/348 (35%), Gaps = 96/348 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----------SIRKYRDAAMIEIDVL 116
            Y+    +G G    V  C  + T +  A+K++            +++ R+A + E+D+L
Sbjct: 4   NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63

Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFG 175
           + +      G  + +Q+++ ++      +VF+ +    LFD+L             R+  
Sbjct: 64  RKV-----SGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIM 116

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           R LLE +  +H L ++H DLKPENILL                             IKL 
Sbjct: 117 RALLEVICALHKLNIVHRDLKPENILLDDDMN------------------------IKLT 152

Query: 236 DFGSTAF--DNQNHSSIVSTRHYRAPEVILG------LGWSYPCDMWSVGCILVELCTGE 287
           DFG +      +    +  T  Y APE+I         G+    DMWS G I+  L  G 
Sbjct: 153 DFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGS 212

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
             F   + +  L M+               S                             
Sbjct: 213 PPFWHRKQMLMLRMIMSGNYQFGSPEWDDYS----------------------------- 243

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                             T+ DL+   L   P +R TA +AL HPFF+
Sbjct: 244 -----------------DTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 274

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (440), Expect = 2e-51
 Identities = 81/338 (23%), Positives = 137/338 (40%), Gaps = 44/338 (13%)

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLA 120
           ++ PRY  LS +GEG +G V   +D   + RVAIK +       Y    + EI +L    
Sbjct: 5   DVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRF- 63

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
           +++     + +      +    + +V   +G  L+  LK         D +  F  Q+L 
Sbjct: 64  RHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILR 120

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            + Y+H   ++H DLKP N+LL ++  +K+  +  +                        
Sbjct: 121 GLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARV------------------ADPD 162

Query: 241 AFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
                  +  V+TR YRAPE++L   G++   D+WSVGCIL E+ +   +F     L+ L
Sbjct: 163 HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQL 222

Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
             +   LG   +  +        + +     L+ P         K     +RL       
Sbjct: 223 NHILGILGSPSQEDLNCIINLKARNY----LLSLPH--------KNKVPWNRLFPNAD-- 268

Query: 360 VDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                S   DLL  +L ++P +R+   QAL HP+    
Sbjct: 269 -----SKALDLLDKMLTFNPHKRIEVEQALAHPYLEQY 301

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  169 bits (428), Expect = 2e-50
 Identities = 75/349 (21%), Positives = 129/349 (36%), Gaps = 88/349 (25%)

Query: 59  NLGENLTP--RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-SIRKYRDAAMIEIDV 115
           ++  +L P   ++I+ ++G+G FG+V +  +++T    A KV+     +  +  M+EID+
Sbjct: 3   HVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDI 62

Query: 116 LQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFG 175
           L            + V++ + F Y N++ I+ E       D +      P     ++   
Sbjct: 63  LASCD------HPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 116

Query: 176 RQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLI 235
           +Q L+++ Y+HD ++IH DLK  NIL              +  G+           IKL 
Sbjct: 117 KQTLDALNYLHDNKIIHRDLKAGNILF-------------TLDGD-----------IKLA 152

Query: 236 DFGSTAF---DNQNHSSIVSTRHYRAPEVILGL-----GWSYPCDMWSVGCILVELCTGE 287
           DFG +A      Q   S + T ++ APEV++        + Y  D+WS+G  L+E+   E
Sbjct: 153 DFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIE 212

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
                   +  L  + ++  P      R                 W              
Sbjct: 213 PPHHELNPMRVLLKIAKSEPPTLAQPSR-----------------WSSNFK--------- 246

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                                D L   L  +   R T  Q L HPF   
Sbjct: 247 ---------------------DFLKKCLEKNVDARWTTSQLLQHPFVTV 274

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  170 bits (430), Expect = 3e-50
 Identities = 70/339 (20%), Positives = 143/339 (42%), Gaps = 55/339 (16%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
            Y+++ K+G G +  V E  +    E+V +K+++ ++K +     EI +L++L       
Sbjct: 36  DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKKK--IKREIKILENLRGGP--- 90

Query: 127 SSHCVQIRNWF--DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
             + + + +           +VFE +         +           +R +  ++L+++ 
Sbjct: 91  --NIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT-----LTDYDIRFYMYEILKALD 143

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF- 242
           Y H + ++H D+KP N+++                         +   ++LID+G   F 
Sbjct: 144 YCHSMGIMHRDVKPHNVMIDH-----------------------EHRKLRLIDWGLAEFY 180

Query: 243 -DNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGE-ALFQTHENLEHL 299
              Q ++  V++R+++ PE+++    + Y  DMWS+GC+L  +   +   F  H+N + L
Sbjct: 181 HPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQL 240

Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
             + + LG             TE  +    + N        + +    +    + + S +
Sbjct: 241 VRIAKVLG-------------TEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSEN 287

Query: 360 VDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
                    D L  LLRYD   RLTAR+A+ HP+F  + 
Sbjct: 288 QHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV 326

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  169 bits (428), Expect = 4e-50
 Identities = 74/341 (21%), Positives = 123/341 (36%), Gaps = 80/341 (23%)

Query: 61  GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQH 118
            E++   Y     +G G F  V+   D++TQ+ VAIK +   ++     +   EI VL  
Sbjct: 4   AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 63

Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQ 177
           +         + V + + ++   H+ ++ + + G  LFD +       +          Q
Sbjct: 64  IK------HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQ 115

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           +L++V Y+HDL ++H DLKPEN+L  S                     L + S I + DF
Sbjct: 116 VLDAVKYLHDLGIVHRDLKPENLLYYS---------------------LDEDSKIMISDF 154

Query: 238 GSTAFDNQNH--SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN 295
           G +  ++     S+   T  Y APEV+    +S   D WS+G I   L  G   F    +
Sbjct: 155 GLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 214

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
            +    + +A            S                                     
Sbjct: 215 AKLFEQILKAEYEFDSPYWDDIS------------------------------------- 237

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                     +  D +  L+  DP +R T  QAL HP+   
Sbjct: 238 ---------DSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 269

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (424), Expect = 4e-49
 Identities = 81/341 (23%), Positives = 143/341 (41%), Gaps = 50/341 (14%)

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHL 119
            +  RY+ LS +G G +G V   +D +T  RVA+K +        +      E+ +L+H+
Sbjct: 15  EVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHM 74

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
              +  G           +  N + +V   +G  L + +K  K        V+    Q+L
Sbjct: 75  KHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDD---HVQFLIYQIL 131

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
             + Y+H   +IH DLKP N+ +                         +   +K++DFG 
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAV------------------------NEDCELKILDFGL 167

Query: 240 TAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
               +   +  V+TR YRAPE++L    ++   D+WSVGCI+ EL TG  LF   ++++ 
Sbjct: 168 ARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQ 227

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
           L ++ R +G     ++++ S  + + + +                         K   + 
Sbjct: 228 LKLILRLVGTPGAELLKKISSESARNYIQ-------------------SLTQMPKMNFAN 268

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE 399
               A     DLL  +L  D  +R+TA QAL H +F   ++
Sbjct: 269 VFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD 309

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  167 bits (422), Expect = 7e-49
 Identities = 79/352 (22%), Positives = 139/352 (39%), Gaps = 46/352 (13%)

Query: 55  HYVFNLGE---NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDA 108
            Y   +G+    +  RY+ L  +G G  G V   +D      VAIK +      + +   
Sbjct: 3   FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62

Query: 109 AMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPV 168
           A  E+ +++ +   +     +    +   +    + +V E +  +L   ++         
Sbjct: 63  AYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME----LDH 118

Query: 169 DLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
           + +     Q+L  + ++H   +IH DLKP NI++ S   +K                   
Sbjct: 119 ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK------------------- 159

Query: 229 SSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA 288
              I       TA  +   +  V TR+YRAPEVILG+G+    D+WSVGCI+ E+   + 
Sbjct: 160 ---ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI 216

Query: 289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFR---RGSRLNWPEGAVSRESIKA 345
           LF   + ++    +   LG      +++       Y     + + L +P+          
Sbjct: 217 LFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPK---------- 266

Query: 346 VKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
               D L    S H     S   DLL  +L  DP++R++   AL HP+    
Sbjct: 267 -LFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 317

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (417), Expect = 1e-48
 Identities = 80/338 (23%), Positives = 130/338 (38%), Gaps = 63/338 (18%)

Query: 70  ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK------YRDAAMIEIDVLQHLAKND 123
            L  +GEG F  V +  D+ T + VAIK ++   +          A+ EI +LQ L    
Sbjct: 2   KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQEL---- 57

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                + + + + F ++++I +VF+ +   L   +K N     P   ++ +    L+ + 
Sbjct: 58  --SHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTP-SHIKAYMLMTLQGLE 114

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
           Y+H   ++H DLKP N+L                        L ++  +KL DFG     
Sbjct: 115 YLHQHWILHRDLKPNNLL------------------------LDENGVLKLADFGLAKSF 150

Query: 244 NQNHSS---IVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
              + +    V TR YRAPE++ G   +    DMW+VGCIL EL           +L+ L
Sbjct: 151 GSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQL 210

Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
             +   LG   E          +    +           S      +             
Sbjct: 211 TRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLL------------- 257

Query: 360 VDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                    DL+ GL  ++P  R+TA QAL   +F N 
Sbjct: 258 ---------DLIQGLFLFNPCARITATQALKMKYFSNR 286

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  164 bits (417), Expect = 1e-48
 Identities = 70/335 (20%), Positives = 124/335 (37%), Gaps = 85/335 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKNDKG 125
           +Y    K+G+G  G V    D  T + VAI+ +    +  ++  + EI V++        
Sbjct: 21  KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMREN------ 74

Query: 126 GSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            + + V   + +   + + +V E L G SL D +            +    R+ L+++ +
Sbjct: 75  KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEF 131

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF-- 242
           +H  ++IH D+K +NILL                G            +KL DFG  A   
Sbjct: 132 LHSNQVIHRDIKSDNILL-------------GMDGS-----------VKLTDFGFCAQIT 167

Query: 243 -DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
            +    S++V T ++ APEV+    +    D+WS+G + +E+  GE  +     L  L +
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYL 227

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           +     P                      L  PE  +S                      
Sbjct: 228 IATNGTP---------------------ELQNPEK-LSAI-------------------- 245

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                  D L+  L  D  +R +A++ L H F + 
Sbjct: 246 -----FRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (412), Expect = 3e-48
 Identities = 62/333 (18%), Positives = 109/333 (32%), Gaps = 78/333 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDK 124
            + ++  +GEG +G V    +R T+E VA+K+V         +    EI + + L     
Sbjct: 6   DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML----- 60

Query: 125 GGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
               + V+        N   +  E   G  LFD ++ +     P    + F  QL+  V 
Sbjct: 61  -NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVV 117

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
           Y+H + + H D+KPEN+LL   + +K+                   S   L         
Sbjct: 118 YLHGIGITHRDIKPENLLLDERDNLKI-------------------SDFGLATVFRYNNR 158

Query: 244 NQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
            +  + +  T  Y APE++    + + P D+WS G +L  +  GE  +    +       
Sbjct: 159 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSD 218

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
            +                             P   +                        
Sbjct: 219 WKEKKTYLN----------------------PWKKIDSA--------------------- 235

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                  LLH +L  +PS R+T        ++ 
Sbjct: 236 ----PLALLHKILVENPSARITIPDIKKDRWYN 264

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (414), Expect = 3e-48
 Identities = 74/347 (21%), Positives = 127/347 (36%), Gaps = 84/347 (24%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KYRDAAMIEID 114
           EN+   Y    ++G G F  V +C ++ T  + A K ++  R         R+    E+ 
Sbjct: 6   ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVS 65

Query: 115 VLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           +L+ +         + + +   ++ +  + ++ E + G  LFDFL   +      +   E
Sbjct: 66  ILKEIQ------HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATE 117

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
           F +Q+L  V Y+H L++ H DLKPENI+L+     K                      IK
Sbjct: 118 FLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPK--------------------PRIK 157

Query: 234 LIDFGSTAFDNQNHSS--IVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
           +IDFG     +  +    I  T  + APE++         DMWS+G I   L +G + F 
Sbjct: 158 IIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL 217

Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
                E LA +        +      S                                 
Sbjct: 218 GDTKQETLANVSAVNYEFEDEYFSNTS--------------------------------- 244

Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
                        +   D +  LL  DP +R+T + +L HP+ +  +
Sbjct: 245 -------------ALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD 278

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  162 bits (411), Expect = 2e-47
 Identities = 69/343 (20%), Positives = 113/343 (32%), Gaps = 89/343 (25%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQ 117
           ++    +  L ++G G+FG V    D +  E VAIK +        +     + E+  LQ
Sbjct: 11  DDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQ 70

Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGR 176
            L         + +Q R  +   +   +V E   G +        K  P     +     
Sbjct: 71  KLR------HPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTH 122

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
             L+ +AY+H   +IH D+K  NILL             S  G            +KL D
Sbjct: 123 GALQGLAYLHSHNMIHRDVKAGNILL-------------SEPGL-----------VKLGD 158

Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEALFQTH 293
           FGS +     + S V T ++ APEVIL +    +    D+WS+G   +EL   +      
Sbjct: 159 FGSASIMAPAN-SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNM 217

Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
             +  L  + +   P  +                    +W E                  
Sbjct: 218 NAMSALYHIAQNESPALQSG------------------HWSEYFR--------------- 244

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRN 396
                          + +   L+  P +R T+   L H F   
Sbjct: 245 ---------------NFVDSCLQKIPQDRPTSEVLLKHRFVLR 272

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  158 bits (399), Expect = 4e-46
 Identities = 86/336 (25%), Positives = 139/336 (41%), Gaps = 60/336 (17%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKND 123
           +Y  L K+GEGT+G V +  +    E  A+K +R  +         + EI +L+ L    
Sbjct: 3   KYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELK--- 58

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
               S+ V++ +    +  + +VFE L   L   L   +         + F  QLL  +A
Sbjct: 59  ---HSNIVKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEG-GLESVTAKSFLLQLLNGIA 114

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF- 242
           Y HD R++H DLKP+N+L+                         +   +K+ DFG     
Sbjct: 115 YCHDRRVLHRDLKPQNLLI------------------------NREGELKIADFGLARAF 150

Query: 243 --DNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
               + ++  + T  YRAP+V++G   +S   D+WSVGCI  E+  G  LF      + L
Sbjct: 151 GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQL 210

Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
             + R LG                        NWP      +        + L       
Sbjct: 211 MRIFRILGTPNSK-------------------NWPNVTELPKYDPNFTVYEPLP--WESF 249

Query: 360 VDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
           +     +  DLL  +L+ DP++R+TA+QAL H +F+
Sbjct: 250 LKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFK 285

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (398), Expect = 4e-46
 Identities = 61/348 (17%), Positives = 128/348 (36%), Gaps = 91/348 (26%)

Query: 60  LGENLTPRY-KILSKMGEGTFGRVLECWDRQTQERVAIKVVRS---IRKYRDAAMIEIDV 115
           +G +   R+ K   ++G G+F  V +  D +T   VA   ++     +  R     E ++
Sbjct: 2   VGMSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEM 61

Query: 116 LQHLAKNDKGGSSHCVQIRNWF----DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDL 170
           L+ L         + V+  + +      +  I +V E +   +L  +LKR K     + +
Sbjct: 62  LKGLQ------HPNIVRFYDSWESTVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKV 113

Query: 171 VREFGRQLLESVAYMHDL--RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPK 228
           +R + RQ+L+ + ++H     +IH DLK +NI +                          
Sbjct: 114 LRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG-----------------------P 150

Query: 229 SSAIKLIDFG-STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
           + ++K+ D G +T        +++ T  + APE+     +    D+++ G  ++E+ T E
Sbjct: 151 TGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE 209

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
             +   +N   +                       +    G +    +     E      
Sbjct: 210 YPYSECQNAAQIY----------------------RRVTSGVKPASFDKVAIPE------ 241

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFR 395
                              + +++ G +R +  ER + +  LNH FF+
Sbjct: 242 -------------------VKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (397), Expect = 8e-46
 Identities = 88/339 (25%), Positives = 147/339 (43%), Gaps = 60/339 (17%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
           +Y+ L K+GEGT+G V +  +R+T E VA+K VR          +A+ EI +L+ L    
Sbjct: 3   KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK--- 59

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                + V++ +       + +VFE     L  +         P ++V+ F  QLL+ + 
Sbjct: 60  ---HKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP-EIVKSFLFQLLKGLG 115

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG---ST 240
           + H   ++H DLKP+N+L                        + ++  +KL +FG   + 
Sbjct: 116 FCHSRNVLHRDLKPQNLL------------------------INRNGELKLANFGLARAF 151

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEA-LFQTHENLEH 298
               + +S+ V T  YR P+V+ G    S   DMWS GCI  EL      LF  ++  + 
Sbjct: 152 GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQ 211

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
           L  + R LG   E      +       +      +P    +   +  V KL+        
Sbjct: 212 LKRIFRLLGTPTEEQWPSMT-------KLPDYKPYPMYPATTSLVNVVPKLN-------- 256

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                 +T  DLL  LL+ +P +R++A +AL HP+F + 
Sbjct: 257 ------ATGRDLLQNLLKCNPVQRISAEEALQHPYFSDF 289

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (396), Expect = 3e-45
 Identities = 63/341 (18%), Positives = 118/341 (34%), Gaps = 90/341 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKN 122
            + +   +G+G+FG+V     ++T +  AIK ++     +    +  M+E  VL    ++
Sbjct: 3   DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 62

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                     +   F  + ++  V E L G  L   ++      F +     +  +++  
Sbjct: 63  P-----FLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILG 115

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + ++H   +++ DLK +NIL                 G +           K+ DFG   
Sbjct: 116 LQFLHSKGIVYRDLKLDNIL-------------LDKDGHI-----------KIADFGMCK 151

Query: 242 F---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEH 298
                +   ++   T  Y APE++LG  +++  D WS G +L E+  G++ F   +  E 
Sbjct: 152 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL 211

Query: 299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL 358
              +       P                           + +E                 
Sbjct: 212 FHSIRMDNPFYPRW-------------------------LEKE----------------- 229

Query: 359 HVDRARSTLTDLLHGLLRYDPSERLTARQA-LNHPFFRNLN 398
                     DLL  L   +P +RL  R     HP FR +N
Sbjct: 230 --------AKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN 262

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  155 bits (393), Expect = 3e-45
 Identities = 64/348 (18%), Positives = 110/348 (31%), Gaps = 98/348 (28%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKN 122
            +K    +GEG+F  V+   +  T    AIK++                E DV+  L   
Sbjct: 9   DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRL--- 65

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F     +           L  ++++     F     R +  +++ +
Sbjct: 66  ---DHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSA 120

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+H   +IH DLKPENILL                             I++ DFG+  
Sbjct: 121 LEYLHGKGIIHRDLKPENILLNED------------------------MHIQITDFGTAK 156

Query: 242 F-----DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                      +S V T  Y +PE++         D+W++GCI+ +L  G   F+     
Sbjct: 157 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEY 216

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV 356
                + +     PE                     +P+                     
Sbjct: 217 LIFQKIIKLEYDFPEKF-------------------FPK--------------------- 236

Query: 357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQA------LNHPFFRNLN 398
                       DL+  LL  D ++RL   +         HPFF ++ 
Sbjct: 237 ----------ARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT 274

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (385), Expect = 4e-44
 Identities = 66/340 (19%), Positives = 119/340 (35%), Gaps = 92/340 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KYRDAAMIEIDVLQHL 119
           +Y++   +G G FG V           VAIK V   R              +E+ +L+ +
Sbjct: 5   QYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKV 64

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                 G S  +++ +WF+  +   ++ E+  P    F    +      +L R F  Q+L
Sbjct: 65  ----SSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVL 120

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG- 238
           E+V + H+  ++H D+K ENIL+  +                          +KLIDFG 
Sbjct: 121 EAVRHCHNCGVLHRDIKDENILIDLNRGE-----------------------LKLIDFGS 157

Query: 239 STAFDNQNHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLE 297
                +  ++    TR Y  PE I           +WS+G +L ++  G+  F+  E + 
Sbjct: 158 GALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEII 217

Query: 298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVS 357
                                           ++ + +  VS E    ++          
Sbjct: 218 R------------------------------GQVFFRQR-VSSECQHLIRW--------- 237

Query: 358 LHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL 397
                            L   PS+R T  +  NHP+ +++
Sbjct: 238 ----------------CLALRPSDRPTFEEIQNHPWMQDV 261

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  151 bits (382), Expect = 9e-44
 Identities = 60/342 (17%), Positives = 109/342 (31%), Gaps = 95/342 (27%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDK 124
           Y++L  +G G++GR  +   +   + +  K +         +   + E+++L+ L     
Sbjct: 6   YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK---- 61

Query: 125 GGSSHCVQIRNWFDYR--NHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLL 179
               + V+  +    R    + IV E   G  L   + +   +      + V     QL 
Sbjct: 62  --HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLT 119

Query: 180 ESVAYMHDL-----RLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKL 234
            ++   H        ++H DLKP N+ L   +                         +KL
Sbjct: 120 LALKECHRRSDGGHTVLHRDLKPANVFLDGKQ------------------------NVKL 155

Query: 235 IDFGSTAF---DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ 291
            DFG       D     + V T +Y +PE +  + ++   D+WS+GC+L ELC     F 
Sbjct: 156 GDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFT 215

Query: 292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDR 351
                E    +                       R G     P    S E          
Sbjct: 216 AFSQKELAGKI-----------------------REGKFRRIPYR-YSDE---------- 241

Query: 352 LKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPF 393
                          L +++  +L      R +  + L +P 
Sbjct: 242 ---------------LNEIITRMLNLKDYHRPSVEEILENPL 268

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  151 bits (382), Expect = 7e-43
 Identities = 69/344 (20%), Positives = 127/344 (36%), Gaps = 88/344 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKN 122
            + +   +G G FG V  C    T +  A+K +      +++    A+ E  +L  ++  
Sbjct: 5   DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTG 64

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
           D       V +   F   + +  + + + G  L   L ++         +R +  +++  
Sbjct: 65  D---CPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS--EADMRFYAAEIILG 119

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-ST 240
           + +MH+  +++ DLKP NILL                         +   +++ D G + 
Sbjct: 120 LEHMHNRFVVYRDLKPANILLD------------------------EHGHVRISDLGLAC 155

Query: 241 AFDNQNHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL 299
            F  +   + V T  Y APEV+  G+ +    D +S+GC+L +L  G + F+ H+  +  
Sbjct: 156 DFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH 215

Query: 300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLH 359
            +    L    E                      P+   S E                  
Sbjct: 216 EIDRMTLTMAVE---------------------LPDS-FSPE------------------ 235

Query: 360 VDRARSTLTDLLHGLLRYDPSERLT-----ARQALNHPFFRNLN 398
                  L  LL GLL+ D + RL      A++    PFFR+L+
Sbjct: 236 -------LRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD 272

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  145 bits (366), Expect = 3e-41
 Identities = 63/334 (18%), Positives = 103/334 (30%), Gaps = 65/334 (19%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
           RY++  K+G G+FG +    D    E VAIK+   ++       IE  + + +      G
Sbjct: 8   RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLEC-VKTKHPQLHIESKIYKMMQ-----G 61

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
                 IR      ++  +V E LGPSL D         F +  V     Q++  + Y+H
Sbjct: 62  GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTVLLLADQMISRIEYIH 120

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
               IH D+KP+N L+   +   L               +    A K  D  +       
Sbjct: 121 SKNFIHRDVKPDNFLMGLGKKGNLV------------YIIDFGLAKKYRDARTHQHIPYR 168

Query: 247 H-SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERA 305
              ++  T  Y +    LG+  S   D+ S+G +L+    G   +Q  +        ER 
Sbjct: 169 ENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERI 228

Query: 306 LGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS 365
                   I    +G    F                                        
Sbjct: 229 SEKKMSTPIEVLCKGYPSEFA--------------------------------------- 249

Query: 366 TLTDLLHGLLRYDPSERLTA---RQALNHPFFRN 396
                L+        ++      RQ   + F R 
Sbjct: 250 ---TYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQ 280

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  145 bits (366), Expect = 5e-41
 Identities = 65/340 (19%), Positives = 114/340 (33%), Gaps = 90/340 (26%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKND 123
           ++IL  +G G+FGRV     R      A+KV++       K  +    E  +L  +    
Sbjct: 6   FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIV---- 61

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVA 183
                  +++   F     I ++ + +      F    K   FP  + + +  ++  ++ 
Sbjct: 62  --THPFIIRMWGTFQDAQQIFMIMDYI-EGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 118

Query: 184 YMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFD 243
           Y+H   +I+ DLKPENILL  +                          IK+ DFG   + 
Sbjct: 119 YLHSKDIIYRDLKPENILLDKN------------------------GHIKITDFGFAKYV 154

Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMME 303
                ++  T  Y APEV+    ++   D WS G ++ E+  G   F     ++    + 
Sbjct: 155 PDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKIL 214

Query: 304 RALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA 363
            A    P                            + +                      
Sbjct: 215 NAELRFPPF-------------------------FNED---------------------- 227

Query: 364 RSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
              + DLL  L+  D S+RL           NHP+F+ + 
Sbjct: 228 ---VKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVV 264

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  144 bits (364), Expect = 6e-41
 Identities = 57/271 (21%), Positives = 99/271 (36%), Gaps = 36/271 (13%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
            YK+  ++GEG+FG + E  +    ++VAIK     R        E    + LA     G
Sbjct: 6   HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPR-RSDAPQLRDEYRTYKLLA-----G 59

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
            +    +  +     H  +V + LGPSL D L       F V  V    +Q+L  V  +H
Sbjct: 60  CTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLARVQSIH 118

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFG-------- 238
           +  L++ D+KP+N L+                          ++ I ++DFG        
Sbjct: 119 EKSLVYRDIKPDNFLI-------------------GRPNSKNANMIYVVDFGMVKFYRDP 159

Query: 239 --STAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENL 296
                   +   ++  T  Y +    LG   S   D+ ++G + +    G   +Q  +  
Sbjct: 160 VTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAA 219

Query: 297 EHLAMMERALGPLPEHMIRRASRGTEKYFRR 327
            +    ER         +R    G  + F +
Sbjct: 220 TNKQKYERIGEKKQSTPLRELCAGFPEEFYK 250

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  142 bits (360), Expect = 6e-40
 Identities = 67/341 (19%), Positives = 119/341 (34%), Gaps = 89/341 (26%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKND 123
           +  L  +G+GTFG+V+   ++ T    A+K++R      +      + E  VLQ+     
Sbjct: 7   FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT---- 62

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEK-LGPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                    ++  F   + +C V E   G  LF  L R     F  +  R +G +++ ++
Sbjct: 63  --RHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSAL 118

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            Y+H   +++ D+K EN++L     IK+  +     G                       
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS--------------------- 157

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
           D     +   T  Y APEV+    +    D W +G ++ E+  G   F   ++     ++
Sbjct: 158 DGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELI 217

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
                  P                           +S E                     
Sbjct: 218 LMEEIRFPRT-------------------------LSPE--------------------- 231

Query: 363 ARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                  LL GLL+ DP +RL      A++ + H FF ++N
Sbjct: 232 ----AKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSIN 268

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  140 bits (353), Expect = 1e-38
 Identities = 64/342 (18%), Positives = 120/342 (35%), Gaps = 92/342 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQHLAKN 122
           ++  +  +G G+FGRV+    +++    A+K++        K  +  + E  +LQ +   
Sbjct: 42  QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV--- 98

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKLGPS-LFDFLKRNKYCPFPVDLVREFGRQLLES 181
                   V++   F   +++ +V E +    +F  L+R     F     R +  Q++ +
Sbjct: 99  ---NFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLT 153

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
             Y+H L LI+ DLKPEN+L+    +                        I++ DFG   
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGY------------------------IQVTDFGFAK 189

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
                  ++  T    APE+IL  G++   D W++G ++ E+  G   F   + ++    
Sbjct: 190 RVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEK 249

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           +       P H                      +                          
Sbjct: 250 IVSGKVRFPSHF-------------------SSD-------------------------- 264

Query: 362 RARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                L DLL  LL+ D ++R            NH +F   +
Sbjct: 265 -----LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTD 301

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  133 bits (335), Expect = 5e-37
 Identities = 56/327 (17%), Positives = 110/327 (33%), Gaps = 83/327 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
             K+L  +G+G FG V+    R  +  VA+K +++      A + E  V+  L       
Sbjct: 8   ELKLLQTIGKGEFGDVMLGDYRGNK--VAVKCIKN-DATAQAFLAEASVMTQLR------ 58

Query: 127 SSHCVQIRNWF-DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAY 184
            S+ VQ+     + +  + IV E +   SL D+L+         D + +F   + E++ Y
Sbjct: 59  HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 118

Query: 185 MHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN 244
           +     +H DL   N+L+                         + +  K+ DFG T   +
Sbjct: 119 LEGNNFVHRDLAARNVLV------------------------SEDNVAKVSDFGLTKEAS 154

Query: 245 QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMER 304
               +      + APE +    +S   D+WS G +L E+ +   +      L+ +     
Sbjct: 155 STQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVV---- 210

Query: 305 ALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR 364
                                 +G +++ P+G                            
Sbjct: 211 ------------------PRVEKGYKMDAPDG-CPPA----------------------- 228

Query: 365 STLTDLLHGLLRYDPSERLTARQALNH 391
             + +++      D + R +  Q    
Sbjct: 229 --VYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  131 bits (329), Expect = 6e-36
 Identities = 55/345 (15%), Positives = 95/345 (27%), Gaps = 81/345 (23%)

Query: 63  NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR----SIRKYRDAAMIEIDVLQH 118
           +L+ RY++   +G G    V    D +    VA+KV+R        +      E      
Sbjct: 4   HLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAA 63

Query: 119 LAKNDKGGSSHCVQIRNWFDYRNH----ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVRE 173
           L           V + +  +          IV E + G +L D +      P       E
Sbjct: 64  L------NHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIE 115

Query: 174 FGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIK 233
                 +++ + H   +IH D+KP NI++                       +       
Sbjct: 116 VIADACQALNFSHQNGIIHRDVKPANIMI------------------SATNAVKVMDFGI 157

Query: 234 LIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH 293
                 +       ++++ T  Y +PE   G       D++S+GC+L E+ TGE  F   
Sbjct: 158 ARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 217

Query: 294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK 353
             +       R     P       S                                   
Sbjct: 218 SPVSVAYQHVREDPIPPSARHEGLSAD--------------------------------- 244

Query: 354 NMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN 398
                        L  ++   L  +P  R      +     R  N
Sbjct: 245 -------------LDAVVLKALAKNPENRYQTAAEMRADLVRVHN 276

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 4e-33
 Identities = 60/337 (17%), Positives = 107/337 (31%), Gaps = 91/337 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKND 123
           +  +  ++G G+FG V +    +    VA+K++       +   A   E+ VL+      
Sbjct: 9   QITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR--- 62

Query: 124 KGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESV 182
                + +    +      + IV +   G SL+  L   +   F +  + +  RQ  + +
Sbjct: 63  ---HVNILLFMGYST-APQLAIVTQWCEGSSLYHHLHIIE-TKFEMIKLIDIARQTAQGM 117

Query: 183 AYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF 242
            Y+H   +IH DLK  NI L                             +K+ DFG    
Sbjct: 118 DYLHAKSIIHRDLKSNNIFLHE------------------------DLTVKIGDFGLATV 153

Query: 243 -----DNQNHSSIVSTRHYRAPEVILGLG---WSYPCDMWSVGCILVELCTGEALFQTHE 294
                 +     +  +  + APEVI       +S+  D+++ G +L EL TG+  +    
Sbjct: 154 KSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNIN 213

Query: 295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN 354
           N + +  M       P+                  R N P+                   
Sbjct: 214 NRDQIIFMVGRGYLSPD--------------LSKVRSNCPKAMK---------------- 243

Query: 355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
                          L+   L+    ER    Q L  
Sbjct: 244 --------------RLMAECLKKKRDERPLFPQILAS 266

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (308), Expect = 7e-33
 Identities = 62/337 (18%), Positives = 99/337 (29%), Gaps = 85/337 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
             ++  K+G+G FG V       T  RVAIK ++      +A + E  V++ L       
Sbjct: 18  SLRLEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGTMSPEAFLQEAQVMKKL------R 70

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
               VQ+           +       SL DFLK        +  + +   Q+   +AY+ 
Sbjct: 71  HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 130

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF---- 242
            +  +H DL+  NIL+     +                        K+ DFG        
Sbjct: 131 RMNYVHRDLRAANILV-GENLV-----------------------CKVADFGLARLIEDN 166

Query: 243 DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMM 302
           +            + APE  L   ++   D+WS G +L EL T   +         +   
Sbjct: 167 EYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVL-- 224

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
                                   RG R+  P                            
Sbjct: 225 --------------------DQVERGYRMPCPPECPES---------------------- 242

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALN--HPFFRNL 397
               L DL+    R +P ER T          +F + 
Sbjct: 243 ----LHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 275

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  123 bits (309), Expect = 8e-33
 Identities = 68/348 (19%), Positives = 120/348 (34%), Gaps = 89/348 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWD---RQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQH 118
            +++L  +G G +G+V          T +  A+KV++        K  +    E  VL+H
Sbjct: 25  NFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEH 84

Query: 119 LAKNDKGGSSHCVQIRNWFDYRNHICIVFE-KLGPSLFDFLKRNKYCPFPVDLVREFGRQ 177
           +       S   V +   F     + ++ +   G  LF  L +     F    V+ +  +
Sbjct: 85  I-----RQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGE 137

Query: 178 LLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDF 237
           ++ ++ ++H L +I+ D+K ENILL S+  + L  +  S                     
Sbjct: 138 IVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF------------------ 179

Query: 238 GSTAFDNQNHSSIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILVELCTGEALFQTHEN 295
              A + +       T  Y AP+++ G   G     D WS+G ++ EL TG + F     
Sbjct: 180 --VADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGE 237

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
               A + R +        +  S                                     
Sbjct: 238 KNSQAEISRRILKSEPPYPQEMS------------------------------------- 260

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERL-----TARQALNHPFFRNLN 398
                    +   DL+  LL  DP +RL      A +   H FF+ +N
Sbjct: 261 ---------ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN 299

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (303), Expect = 2e-32
 Identities = 60/335 (17%), Positives = 108/335 (32%), Gaps = 87/335 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
             K++ ++G G FG V   +     + VA+K ++      DA + E ++++ L       
Sbjct: 14  TLKLVERLGAGQFGEVWMGYYNGHTK-VAVKSLKQGSMSPDAFLAEANLMKQLQ------ 66

Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
               V++      +  I I+ E +   SL DFLK        ++ + +   Q+ E +A++
Sbjct: 67  HQRLVRLYAVVT-QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFI 125

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF--- 242
            +   IH DL+  NIL+  +                           K+ DFG       
Sbjct: 126 EERNYIHRDLRAANILVSDTLS------------------------CKIADFGLARLIED 161

Query: 243 -DNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
            +            + APE I    ++   D+WS G +L E+ T   +         +  
Sbjct: 162 NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVI- 220

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
                                +   RG R+  P+     E                    
Sbjct: 221 ---------------------QNLERGYRMVRPDN-CPEE-------------------- 238

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALN--HPFF 394
                L  L+    +  P +R T     +    FF
Sbjct: 239 -----LYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 4e-31
 Identities = 58/336 (17%), Positives = 120/336 (35%), Gaps = 84/336 (25%)

Query: 73  KMGEGTFGRVLECWDR--QTQERVAIKVVR---SIRKYRDAAMIEIDVLQHLAKNDKGGS 127
           ++G G FG V + + +  +  + VA+K+++   +    +D  + E +V+Q L       +
Sbjct: 14  ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQL------DN 67

Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
            + V++    +  + + ++       L  +L++N+        + E   Q+   + Y+ +
Sbjct: 68  PYIVRMIGICEAESWMLVMEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEE 125

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
              +H DL   N+LLV+  + K+  +  S                      +     +  
Sbjct: 126 SNFVHRDLAARNVLLVTQHYAKISDFGLSK------------------ALRADENYYKAQ 167

Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LCTGEALFQTHENLEHLAMMERAL 306
           +       + APE I    +S   D+WS G ++ E    G+  ++  +  E  AM+E   
Sbjct: 168 THGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE--- 224

Query: 307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST 366
                               +G R+  P G   RE                         
Sbjct: 225 --------------------KGERMGCPAG-CPRE------------------------- 238

Query: 367 LTDLLHGLLRYDPSERLTARQ---ALNHPFFRNLNE 399
           + DL++    YD   R         L + ++  +NE
Sbjct: 239 MYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVVNE 274

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (293), Expect = 5e-31
 Identities = 52/325 (16%), Positives = 103/325 (31%), Gaps = 75/325 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
               + ++G G FG V   +    +++VAIK +R      +  + E +V+  L       
Sbjct: 6   ELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKL------S 58

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
               VQ+      +  IC+VFE +         R +   F  + +      + E +AY+ 
Sbjct: 59  HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE 118

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
           +  +IH DL   N L+  ++ IK+       S     R +                   +
Sbjct: 119 EACVIHRDLAARNCLVGENQVIKV-------SDFGMTRFVLDD-------------QYTS 158

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL 306
            +       + +PEV     +S   D+WS G ++ E+ +   +   + +   +       
Sbjct: 159 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVED---- 214

Query: 307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST 366
                                G RL  P  A +                           
Sbjct: 215 ------------------ISTGFRLYKPRLASTH-------------------------- 230

Query: 367 LTDLLHGLLRYDPSERLTARQALNH 391
           +  +++   +  P +R    + L  
Sbjct: 231 VYQIMNHCWKERPEDRPAFSRLLRQ 255

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 3e-30
 Identities = 55/344 (15%), Positives = 102/344 (29%), Gaps = 94/344 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQER--VAIKVVRSI--RKYRDAAMIEIDVLQHLAKN 122
             K    +GEG FG+VL+   ++   R   AIK ++    +        E++VL  L  +
Sbjct: 11  DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHH 70

Query: 123 DKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYC--------------PFP 167
                 + + +    ++R ++ +  E     +L DFL++++                   
Sbjct: 71  P-----NIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 125

Query: 168 VDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLP 227
              +  F   +   + Y+   + IH DL   NIL+  +   K+  +  S   E       
Sbjct: 126 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE------- 178

Query: 228 KSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGE 287
                               +       + A E +    ++   D+WS G +L E+ +  
Sbjct: 179 ---------------VYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLG 223

Query: 288 ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVK 347
                      L                       +   +G RL  P             
Sbjct: 224 GTPYCGMTCAELY----------------------EKLPQGYRLEKPLNCDDE------- 254

Query: 348 KLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
                              + DL+    R  P ER +  Q L  
Sbjct: 255 -------------------VYDLMRQCWREKPYERPSFAQILVS 279

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (290), Expect = 5e-30
 Identities = 46/360 (12%), Positives = 106/360 (29%), Gaps = 112/360 (31%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQER-----VAIKVVR--SIRKYRDAAMIEIDVLQHL 119
             +    +G G FG+V+        +      VA+K+++  +    R+A M E+ ++  L
Sbjct: 38  NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 97

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNK---------------- 162
             ++     + V +         I ++FE      L ++L+  +                
Sbjct: 98  GSHE-----NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 152

Query: 163 -----YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS 217
                      + +  F  Q+ + + ++     +H DL   N+L+   +           
Sbjct: 153 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKV---------- 202

Query: 218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCD 272
                         +K+ DFG       +       +      + APE +    ++   D
Sbjct: 203 --------------VKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSD 248

Query: 273 MWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRL 331
           +WS G +L E+ + G   +       +                        K  + G ++
Sbjct: 249 VWSYGILLWEIFSLGVNPYPGIPVDANF----------------------YKLIQNGFKM 286

Query: 332 NWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
           + P  A                             +  ++     +D  +R +     + 
Sbjct: 287 DQPFYATEE--------------------------IYIIMQSCWAFDSRKRPSFPNLTSF 320

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  114 bits (286), Expect = 9e-30
 Identities = 50/328 (15%), Positives = 105/328 (32%), Gaps = 83/328 (25%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
              +  K+G G +G V E   ++    VA+K ++      +  + E  V++ +       
Sbjct: 18  DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------ 71

Query: 127 SSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYM 185
             + VQ+           I+ E +   +L D+L+          ++     Q+  ++ Y+
Sbjct: 72  HPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 131

Query: 186 HDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ 245
                IH DL   N L+               +             +K+ DFG +     
Sbjct: 132 EKKNFIHRDLAARNCLV-------------GENHL-----------VKVADFGLSRLMTG 167

Query: 246 N----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
           +    H+       + APE +    +S   D+W+ G +L E+ T         +L  +  
Sbjct: 168 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYE 227

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
           +                        +  R+  PEG   +                     
Sbjct: 228 L----------------------LEKDYRMERPEGCPEK--------------------- 244

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQAL 389
                + +L+    +++PS+R +  +  
Sbjct: 245 -----VYELMRACWQWNPSDRPSFAEIH 267

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  112 bits (281), Expect = 5e-29
 Identities = 58/336 (17%), Positives = 105/336 (31%), Gaps = 77/336 (22%)

Query: 62  ENLTPRYKILSKMGEGTFGRVLECWDRQTQER---VAIKVVRS--IRKYRDAAMIEIDVL 116
           E      KI   +G G FG V     +   +R   VAIK ++S    K R   + E  ++
Sbjct: 22  EIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIM 81

Query: 117 QHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGR 176
                       + + +         + I+ E +     D   R     F V  +    R
Sbjct: 82  GQFD------HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR 135

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
            +   + Y+ D+  +H DL   NIL+ S+   K+  +  S                + ++
Sbjct: 136 GIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLS----------------RFLE 179

Query: 237 FGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHEN 295
             ++     +         + APE I    ++   D+WS G ++ E+ + GE  +    N
Sbjct: 180 DDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTN 239

Query: 296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM 355
            + +  +E                       +  RL  P    S                
Sbjct: 240 QDVINAIE-----------------------QDYRLPPPMDCPSA--------------- 261

Query: 356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
                      L  L+    + D + R    Q +N 
Sbjct: 262 -----------LHQLMLDCWQKDRNHRPKFGQIVNT 286

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  110 bits (276), Expect = 1e-28
 Identities = 55/329 (16%), Positives = 106/329 (32%), Gaps = 85/329 (25%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGS 127
              L ++G G FG V     R  Q  VAIK+++      D  + E  V+ +L+       
Sbjct: 6   LTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------H 58

Query: 128 SHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
              VQ+      +  I I+ E +         R     F    + E  + + E++ Y+  
Sbjct: 59  EKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 118

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAF----D 243
            + +H DL   N L                        +     +K+ DFG + +    +
Sbjct: 119 KQFLHRDLAARNCL------------------------VNDQGVVKVSDFGLSRYVLDDE 154

Query: 244 NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM 302
             +         +  PEV++   +S   D+W+ G ++ E+ + G+  ++   N E    +
Sbjct: 155 YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHI 214

Query: 303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR 362
                                   +G RL  P  A  +                      
Sbjct: 215 -----------------------AQGLRLYRPHLASEK---------------------- 229

Query: 363 ARSTLTDLLHGLLRYDPSERLTARQALNH 391
               +  +++        ER T +  L++
Sbjct: 230 ----VYTIMYSCWHEKADERPTFKILLSN 254

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (277), Expect = 2e-28
 Identities = 57/346 (16%), Positives = 102/346 (29%), Gaps = 83/346 (23%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGG 126
              +   +G+G FG V     +   E VA+K+  S  +       EI     L       
Sbjct: 4   TIVLQESIGKGRFGEVWRG--KWRGEEVAVKIFSSREERSWFREAEIYQTVML------R 55

Query: 127 SSHCVQIRNWFDYRN----HICIVFEKL-GPSLFDFLKRNKYCP-----FPVDLVREFGR 176
             + +      +  N     + +V +     SLFD+L R            +        
Sbjct: 56  HENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH 115

Query: 177 QLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLID 236
             +E V       + H DLK +NIL+               +G              + D
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILV-------------KKNGT-----------CCIAD 151

Query: 237 FGSTAFDNQNH-------SSIVSTRHYRAPEVILG------LGWSYPCDMWSVGCILVEL 283
            G     +          +  V T+ Y APEV+               D++++G +  E+
Sbjct: 152 LGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211

Query: 284 CTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESI 343
               ++   HE+ +          P  E M +              R N P    S E++
Sbjct: 212 ARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ-------KLRPNIPNRWQSCEAL 264

Query: 344 KAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL 389
           + +                       ++      + + RLTA +  
Sbjct: 265 RVMA---------------------KIMRECWYANGAARLTALRIK 289

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 6e-28
 Identities = 60/347 (17%), Positives = 111/347 (31%), Gaps = 95/347 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVR--SIRKYRDAAMIEIDVLQHL 119
           R      +G G FG+V+E              VA+K+++  +    R+A M E+ VL +L
Sbjct: 24  RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYL 83

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYC-------------- 164
             +      + V +           ++ E      L +FL+R +                
Sbjct: 84  GNHM-----NIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDD 138

Query: 165 --PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP 222
                ++ +  F  Q+ + +A++     IH DL   NILL      K+  +  +      
Sbjct: 139 ELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLA------ 192

Query: 223 FRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE 282
            R +   S            +     +      + APE I    +++  D+WS G  L E
Sbjct: 193 -RDIKNDS------------NYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWE 239

Query: 283 LCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES 342
           L +  +       ++                         K  + G R+  PE A +   
Sbjct: 240 LFSLGSSPYPGMPVDSKFY---------------------KMIKEGFRMLSPEHAPAE-- 276

Query: 343 IKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL 389
                                   + D++      DP +R T +Q +
Sbjct: 277 ------------------------MYDIMKTCWDADPLKRPTFKQIV 299

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (271), Expect = 9e-28
 Identities = 63/331 (19%), Positives = 111/331 (33%), Gaps = 84/331 (25%)

Query: 73  KMGEGTFGRVLECWDRQTQER--VAIKVVR--SIRKYRDAAMIEIDVLQHLAKNDKGGSS 128
           ++G G FG V +   R  +++  VAIKV++  + +   +  M E  ++  L       + 
Sbjct: 16  ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL------DNP 69

Query: 129 HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD 187
           + V++         + +V E   G  L  FL   K    PV  V E   Q+   + Y+ +
Sbjct: 70  YIVRLIGVCQA-EALMLVMEMAGGGPLHKFL-VGKREEIPVSNVAELLHQVSMGMKYLEE 127

Query: 188 LRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH 247
              +H DL   N+LLV+  + K+  +  S                     G+        
Sbjct: 128 KNFVHRDLAARNVLLVNRHYAKISDFGLSK------------------ALGADDSYYTAR 169

Query: 248 SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE-LCTGEALFQTHENLEHLAMMERAL 306
           S+      + APE I    +S   D+WS G  + E L  G+  ++  +  E +A +E   
Sbjct: 170 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE--- 226

Query: 307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST 366
                               +G R+  P      E                         
Sbjct: 227 --------------------QGKRMECPPE-CPPE------------------------- 240

Query: 367 LTDLLHGLLRYDPSERLTAR---QALNHPFF 394
           L  L+     Y   +R       Q +   ++
Sbjct: 241 LYALMSDCWIYKWEDRPDFLTVEQRMRACYY 271

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 4e-27
 Identities = 48/349 (13%), Positives = 110/349 (31%), Gaps = 96/349 (27%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQE-------RVAIKVVR--SIRKYRDAAMIEIDVLQ 117
           R  +   +GEG FG+V+        +       +VA+K+++  +  K     + E+++++
Sbjct: 14  RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMK 73

Query: 118 HLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCP----------- 165
            + K+      + + +         + ++ E     +L ++L+  +              
Sbjct: 74  MIGKHK-----NIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNP 128

Query: 166 ---FPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP 222
                   +     Q+   + Y+   + IH DL   N+L+     +K+  +  +      
Sbjct: 129 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----- 183

Query: 223 FRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE 282
                                 +  ++      + APE +    +++  D+WS G +L E
Sbjct: 184 --------------DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWE 229

Query: 283 LCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRES 342
           + T          +E L                       K  + G R++ P    + E 
Sbjct: 230 IFTLGGSPYPGVPVEELF----------------------KLLKEGHRMDKPSN-CTNE- 265

Query: 343 IKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
                                   L  ++       PS+R T +Q +  
Sbjct: 266 ------------------------LYMMMRDCWHAVPSQRPTFKQLVED 290

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 6e-27
 Identities = 49/354 (13%), Positives = 113/354 (31%), Gaps = 95/354 (26%)

Query: 67  RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVR--SIRKYRDAAMIEIDVLQHL 119
           +  +  ++G+G+FG V E   +     + + RVAIK V   +  + R   + E  V++  
Sbjct: 21  KITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF 80

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKY--------CPFPVDL 170
                    H V++           ++ E +    L  +L+  +          P  +  
Sbjct: 81  ------NCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 134

Query: 171 VREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSS 230
           + +   ++ + +AY++  + +H DL   N ++     +K+                    
Sbjct: 135 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKI-------------------G 175

Query: 231 AIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALF 290
              +          +     +    + +PE +    ++   D+WS G +L E+ T     
Sbjct: 176 DFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQP 235

Query: 291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD 350
               + E +                       ++   G  L+ P+               
Sbjct: 236 YQGLSNEQVL----------------------RFVMEGGLLDKPDNCPDM---------- 263

Query: 351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN------HPFFRNLN 398
                           L +L+    +Y+P  R +  + ++       P FR ++
Sbjct: 264 ----------------LFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREVS 301

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  107 bits (267), Expect = 7e-27
 Identities = 48/330 (14%), Positives = 96/330 (29%), Gaps = 80/330 (24%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKV-VRSIRKYRDAAMI-----EIDVLQHLAK 121
           +K +  +G G FG V +       E+V I V ++ +R+            E  V+  +  
Sbjct: 11  FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV-- 68

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                + H  ++           I        L D+++ +K        +  +  Q+ + 
Sbjct: 69  ----DNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKG 123

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           + Y+ D RL+H DL   N+L+ + + +K+  +                    L       
Sbjct: 124 MNYLEDRRLVHRDLAARNVLVKTPQHVKITDF-------------------GLAKLLGAE 164

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
               +         + A E IL   +++  D+WS G  + EL T  +          ++ 
Sbjct: 165 EKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEIS- 223

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
                                    +G RL  P                           
Sbjct: 224 ---------------------SILEKGERLPQPPICTID--------------------- 241

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNH 391
                +  ++      D   R   R+ +  
Sbjct: 242 -----VYMIMVKCWMIDADSRPKFRELIIE 266

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (262), Expect = 2e-26
 Identities = 44/259 (16%), Positives = 83/259 (32%), Gaps = 32/259 (12%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQER----VAIKVVR--SIRKYRDAAMIEIDVLQHLA 120
                  +G G FG V +   + +  +    VAIK ++     K R   + E  ++    
Sbjct: 8   CVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQF- 66

Query: 121 KNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLE 180
                   + +++         + I+ E +     D   R K   F V  +    R +  
Sbjct: 67  -----SHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAA 121

Query: 181 SVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGST 240
            + Y+ ++  +H DL   NIL+ S+   K+  +  S                        
Sbjct: 122 GMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSR------------------VLEDD 163

Query: 241 AFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL- 299
                  S       + APE I    ++   D+WS G ++ E+ T         +   + 
Sbjct: 164 PEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM 223

Query: 300 -AMMERALGPLPEHMIRRA 317
            A+ +    P P       
Sbjct: 224 KAINDGFRLPTPMDCPSAI 242

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  104 bits (261), Expect = 3e-26
 Identities = 50/358 (13%), Positives = 101/358 (28%), Gaps = 113/358 (31%)

Query: 67  RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVR--SIRKYRDAAMIEIDVLQHL 119
             + +  +GEG FGRV +         +    VA+K+++  +    +     E  ++   
Sbjct: 14  NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEF 73

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYC-------------- 164
                  + + V++         +C++FE +    L +FL+                   
Sbjct: 74  ------DNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 127

Query: 165 --------PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS 216
                   P          RQ+   +AY+ + + +H DL   N L+              
Sbjct: 128 RVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLV-------------G 174

Query: 217 SSGEMPFRCLPKSSAIKLIDFGSTAF-----DNQNHSSIVSTRHYRAPEVILGLGWSYPC 271
            +             +K+ DFG +         +   +      +  PE I    ++   
Sbjct: 175 ENMV-----------VKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTES 223

Query: 272 DMWSVGCILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRL 331
           D+W+ G +L E+ +           E +                          R G+ L
Sbjct: 224 DVWAYGVVLWEIFSYGLQPYYGMAHEEVIYY----------------------VRDGNIL 261

Query: 332 NWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQAL 389
             PE                               L +L+       P++R +     
Sbjct: 262 ACPENCPLE--------------------------LYNLMRLCWSKLPADRPSFCSIH 293

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (259), Expect = 4e-26
 Identities = 52/330 (15%), Positives = 92/330 (27%), Gaps = 80/330 (24%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQER---VAIKVVRSIR--KYRDAAMIEIDVLQHLAK 121
           R ++   +GEG FG V +      +     VAIK  ++      R+  + E   ++    
Sbjct: 8   RIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQF-- 65

Query: 122 NDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLES 181
                  H V++       N + I+ E           + +     +  +  +  QL  +
Sbjct: 66  ----DHPHIVKLIGVIT-ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTA 120

Query: 182 VAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTA 241
           +AY+   R +H D+   N+L+ S++ +KL  +  S   E                     
Sbjct: 121 LAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS------------------- 161

Query: 242 FDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAM 301
                 S       + APE I    ++   D+W  G  + E+               +  
Sbjct: 162 -TYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG 220

Query: 302 MERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVD 361
                                     G RL  P                           
Sbjct: 221 R----------------------IENGERLPMPPN-CPPT-------------------- 237

Query: 362 RARSTLTDLLHGLLRYDPSERLTARQALNH 391
                L  L+     YDPS R    +    
Sbjct: 238 -----LYSLMTKCWAYDPSRRPRFTELKAQ 262

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (253), Expect = 2e-25
 Identities = 49/258 (18%), Positives = 91/258 (35%), Gaps = 45/258 (17%)

Query: 67  RYKILSKMGEGTFGRVLECWDRQTQER---VAIKVVR----SIRKYRDAAMIEIDVLQHL 119
             ++L K+G+G+FG V          +   VA+K ++    S  +  D  + E++ +  L
Sbjct: 9   DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSL 68

Query: 120 AKNDKGGSSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLL 179
                    + +++         + +V E           R     F +  +  +  Q+ 
Sbjct: 69  ------DHRNLIRLYGVV-LTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVA 121

Query: 180 ESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGS 239
           E + Y+   R IH DL   N+LL + +                         +K+ DFG 
Sbjct: 122 EGMGYLESKRFIHRDLAARNLLLATRDL------------------------VKIGDFGL 157

Query: 240 TAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT 292
                QN               + APE +    +S+  D W  G  L E+ T G+  +  
Sbjct: 158 MRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIG 217

Query: 293 HENLEHLAMMERALGPLP 310
               + L  +++    LP
Sbjct: 218 LNGSQILHKIDKEGERLP 235

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =   99 bits (248), Expect = 2e-24
 Identities = 53/351 (15%), Positives = 105/351 (29%), Gaps = 100/351 (28%)

Query: 67  RYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVR--SIRKYRDAAMIEIDVLQHL 119
           R K+   +G G FG+V+E          T   VA+K+++  +      A M E+ +L H 
Sbjct: 14  RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIH- 72

Query: 120 AKNDKGGSSHCVQIRNWFDY----RNHICIVFEKL-GPSLFDFLKRNKYC---------- 164
                    H + + N           + ++ E     +L  +L+  +            
Sbjct: 73  -------IGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPED 125

Query: 165 ----PFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE 220
                  ++ +  +  Q+ + + ++   + IH DL   NILL     +K+          
Sbjct: 126 LYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKI---------- 175

Query: 221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL 280
                        L        D            + APE I    ++   D+WS G +L
Sbjct: 176 ---------CDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLL 226

Query: 281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSR 340
            E+ +  A       ++                         +  + G+R+  P+     
Sbjct: 227 WEIFSLGASPYPGVKIDEEFC---------------------RRLKEGTRMRAPDYTTPE 265

Query: 341 ESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH 391
                                     +   +      +PS+R T  + + H
Sbjct: 266 --------------------------MYQTMLDCWHGEPSQRPTFSELVEH 290

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  100 bits (249), Expect = 2e-24
 Identities = 43/325 (13%), Positives = 88/325 (27%), Gaps = 77/325 (23%)

Query: 73  KMGEGTFGRVLECWDR---QTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGS 127
            +G G FG V           +   A+K +  I         + E  +++  +       
Sbjct: 34  VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS------H 87

Query: 128 SHCVQIRN-WFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
            + + +            +V   +         RN+     V  +  FG Q+ + + ++ 
Sbjct: 88  PNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA 147

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
             + +H DL   N +L     +K+  +  +                    +        N
Sbjct: 148 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR-----------------DMYDKEFDSVHN 190

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLAMMERAL 306
            +       + A E +    ++   D+WS G +L EL T  A      N   +       
Sbjct: 191 KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDIT------ 244

Query: 307 GPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST 366
                            Y  +G RL  PE                               
Sbjct: 245 ----------------VYLLQGRRLLQPEYCPDP-------------------------- 262

Query: 367 LTDLLHGLLRYDPSERLTARQALNH 391
           L +++          R +  + ++ 
Sbjct: 263 LYEVMLKCWHPKAEMRPSFSELVSR 287

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 72.9 bits (178), Expect = 8e-16
 Identities = 30/216 (13%), Positives = 61/216 (28%), Gaps = 27/216 (12%)

Query: 68  YKILSKMGEGTFGRVLECWDRQTQERVAIKVVR-SIRKYRDAAMIEIDVLQHLAKNDKGG 126
             I   MGEG    V  C+  +  E   +K  +     ++           H +      
Sbjct: 2   DAIGKLMGEGKESAVFNCYSEKFGE-CVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRS 60

Query: 127 SSHCVQIRNWFDYRNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMH 186
           + +  +            +   +    L + +   +     V+   E    +LE VA  +
Sbjct: 61  ARNEFRALQKLQGLAVPKVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY 120

Query: 187 DLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN 246
              ++H DL   N+L+                             I +IDF  +    + 
Sbjct: 121 HRGIVHGDLSQYNVLVSEEG-------------------------IWIIDFPQSVEVGEE 155

Query: 247 HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVE 282
               +  R  R         +    D+ S    +++
Sbjct: 156 GWREILERDVRNIITYFSRTYRTEKDINSAIDRILQ 191

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	399
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.92
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	98.42
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	98.0
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	97.91
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	97.44
d1nw1a_	395	Choline kinase {Caenorhabditis elegans [TaxId: 623	96.89
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	96.66

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-61  Score=438.25  Aligned_cols=249  Identities=25%  Similarity=0.457  Sum_probs=218.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||+||+|++..+++.||||++.+..    .....+..|+++++.+.      ||||+++++++.+++
T Consensus         6 ~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~------hpnIv~~~~~~~~~~   79 (263)
T d2j4za1           6 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR------HPNILRLYGYFHDAT   79 (263)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCC------CTTBCCEEEEEECSS
T ss_pred             hHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcC------CCCCCeEEEEEEECC
Confidence            57999999999999999999999999999999997432    23455677888888775      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||| +|+|.+++...+  .+++..++.|+.||+.||+|||++|||||||||+|||+                  
T Consensus        80 ~~~ivmEy~~~g~L~~~l~~~~--~l~e~~~~~i~~qi~~al~~lH~~~ivHrDiKp~Nill------------------  139 (263)
T d2j4za1          80 RVYLILEYAPLGTVYRELQKLS--KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL------------------  139 (263)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE------------------
T ss_pred             EEEEEEeecCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHCCeeeeeecccccee------------------
Confidence            999999999 899999998766  59999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                            +.++.+||+|||+|..... .....+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+..+..
T Consensus       140 ------~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~  213 (263)
T d2j4za1         140 ------GSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY  213 (263)
T ss_dssp             ------CTTSCEEECCCCSCSCCCCCCCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred             ------cCCCCEeecccceeeecCCCcccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHH
Confidence                  4567799999999977543 345678999999999999999999999999999999999999999988877777


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.+....+|                                                  +.+|+++.+||.+||+.||
T Consensus       214 ~~i~~~~~~~p--------------------------------------------------~~~s~~~~~li~~~L~~dp  243 (263)
T d2j4za1         214 KRISRVEFTFP--------------------------------------------------DFVTEGARDLISRLLKHNP  243 (263)
T ss_dssp             HHHHTTCCCCC--------------------------------------------------TTSCHHHHHHHHHHTCSSG
T ss_pred             HHHHcCCCCCC--------------------------------------------------ccCCHHHHHHHHHHccCCH
Confidence            66654322221                                                  3467889999999999999


Q ss_pred             CCCCCHHHHhCCccccC
Q 015867          380 SERLTARQALNHPFFRN  396 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~  396 (399)
                      .+|||++|+|+||||++
T Consensus       244 ~~R~t~~eil~hp~~~~  260 (263)
T d2j4za1         244 SQRPMLREVLEHPWITA  260 (263)
T ss_dssp             GGSCCHHHHHTCHHHHH
T ss_pred             hHCcCHHHHHcCcCcCC
Confidence            99999999999999975

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-60  Score=436.90  Aligned_cols=252  Identities=26%  Similarity=0.424  Sum_probs=219.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      .++|++++.||+|+||+||+|.+..+|+.||||+++... ...+.+..|+++++.+.      ||||+++++++.+++.+
T Consensus        19 ~~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~~~~~~~~~~   92 (293)
T d1yhwa1          19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK------NPNIVNYLDSYLVGDEL   92 (293)
T ss_dssp             TTTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCC------CTTBCCEEEEEEETTEE
T ss_pred             ccccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCC------CCCEeeEeEEEEECCEE
Confidence            357999999999999999999999999999999997543 33456788999998885      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||||| ||+|.+++.+.   .+++..++.|+.||+.||+|||++|||||||||+|||+                    
T Consensus        93 ~ivmEy~~gg~L~~~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl--------------------  149 (293)
T d1yhwa1          93 WVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL--------------------  149 (293)
T ss_dssp             EEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE--------------------
T ss_pred             EEEEEecCCCcHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEE--------------------
Confidence            9999999 99999988765   49999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                          +.++.+||+|||+|....   ......+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..+.+
T Consensus       150 ----~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~  225 (293)
T d1yhwa1         150 ----GMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL  225 (293)
T ss_dssp             ----CTTCCEEECCCTTCEECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHH
T ss_pred             ----CCCCcEeeccchhheeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHH
Confidence                346779999999987643   2345668999999999999999999999999999999999999999988877776


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.....+.                                               ...++.++.++++||.+||+.||
T Consensus       226 ~~~~~~~~~~-----------------------------------------------~~~~~~~s~~~~~li~~~L~~dP  258 (293)
T d1yhwa1         226 YLIATNGTPE-----------------------------------------------LQNPEKLSAIFRDFLNRCLDMDV  258 (293)
T ss_dssp             HHHHHHCSCC-----------------------------------------------CSSGGGSCHHHHHHHHHHTCSST
T ss_pred             HHHHhCCCCC-----------------------------------------------CCCcccCCHHHHHHHHHHccCCh
Confidence            6665432110                                               11224678889999999999999


Q ss_pred             CCCCCHHHHhCCccccC
Q 015867          380 SERLTARQALNHPFFRN  396 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~  396 (399)
                      .+|||++|+|+||||+.
T Consensus       259 ~~R~s~~eil~Hp~~~~  275 (293)
T d1yhwa1         259 EKRGSAKELLQHQFLKI  275 (293)
T ss_dssp             TTSCCHHHHTTCGGGGG
T ss_pred             hHCcCHHHHhcCHhhCC
Confidence            99999999999999975

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-61  Score=437.48  Aligned_cols=254  Identities=25%  Similarity=0.383  Sum_probs=210.7

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      +.++|++++.||+|+||+||+|++..+|+.||||+++...  .....+..|+++++.+.      ||||+++++++.+++
T Consensus         3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~------HpnIv~~~~~~~~~~   76 (271)
T d1nvra_           3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLN------HENVVKFYGHRREGN   76 (271)
T ss_dssp             TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCC------CTTBCCEEEEEEETT
T ss_pred             CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCC------CCCEeeEeeeeccCc
Confidence            4568999999999999999999999999999999986532  23345778888888875      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||| ||+|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||++                 
T Consensus        77 ~~~ivmEy~~gg~L~~~l~~~~--~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~-----------------  137 (271)
T d1nvra_          77 IQYLFLEYCSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD-----------------  137 (271)
T ss_dssp             EEEEEEECCTTEEGGGGSBTTT--BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC-----------------
T ss_pred             eeEEEEeccCCCcHHHHHhcCC--CCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC-----------------
Confidence            999999999 899999997655  699999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                             .++.+||+|||+|.....     .....+||+.|||||++.+..+ +.++|||||||++|+|++|++||....
T Consensus       138 -------~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~  210 (271)
T d1nvra_         138 -------ERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  210 (271)
T ss_dssp             -------TTCCEEECCCTTCEECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSS
T ss_pred             -------CCCCEEEccchhheeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCC
Confidence                   466799999999876321     2356789999999999998876 578999999999999999999997655


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..............                                               .....+.+|.++.+||.+|
T Consensus       211 ~~~~~~~~~~~~~~-----------------------------------------------~~~~~~~~s~~~~~li~~~  243 (271)
T d1nvra_         211 DSCQEYSDWKEKKT-----------------------------------------------YLNPWKKIDSAPLALLHKI  243 (271)
T ss_dssp             TTSHHHHHHHTTCT-----------------------------------------------TSTTGGGSCHHHHHHHHHH
T ss_pred             hHHHHHHHHhcCCC-----------------------------------------------CCCccccCCHHHHHHHHHH
Confidence            43322222111100                                               0112245688899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccC
Q 015867          375 LRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |+.||.+|||++|+|+||||++
T Consensus       244 L~~dP~~R~t~~eil~hpwf~~  265 (271)
T d1nvra_         244 LVENPSARITIPDIKKDRWYNK  265 (271)
T ss_dssp             SCSSTTTSCCHHHHTTCTTTTC
T ss_pred             cCCChhHCcCHHHHhcCHhhCc
Confidence            9999999999999999999975

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.3e-60  Score=441.21  Aligned_cols=261  Identities=28%  Similarity=0.449  Sum_probs=210.8

Q ss_pred             CCccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           61 GENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        61 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      .+.+.++|++.+.||+|+||+||+|++..+++.||||++....  .....+..|+.+++.+.      ||||+++++++.
T Consensus         4 ~edi~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~l~~~~~   77 (307)
T d1a06a_           4 AEDIRDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK------HPNIVALDDIYE   77 (307)
T ss_dssp             CSCGGGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCC------CTTBCCEEEEEE
T ss_pred             CCCCccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCC------CCCCCcEEEEEE
Confidence            4556778999999999999999999999999999999997532  23345667888888875      599999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      +++.+|+||||| |++|.+++...+  .+++..+..++.||+.||+|||++|||||||||+|||+...            
T Consensus        78 ~~~~~~lvmE~~~gg~L~~~l~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~------------  143 (307)
T d1a06a_          78 SGGHLYLIMQLVSGGELFDRIVEKG--FYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL------------  143 (307)
T ss_dssp             CSSEEEEEECCCCSCBHHHHHHTCS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSS------------
T ss_pred             ECCEEEEEEeccCCCcHHHhhhccc--CCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeeccc------------
Confidence            999999999999 899999998765  69999999999999999999999999999999999999542            


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                               +.++.+||+|||++.....  ...+.+||+.|||||++.+..|+.++|||||||++|+|++|.+||.+.+.
T Consensus       144 ---------~~~~~vkl~DFG~a~~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~  214 (307)
T d1a06a_         144 ---------DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND  214 (307)
T ss_dssp             ---------STTCCEEECCC------------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred             ---------CCCceEEEeccceeEEccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCH
Confidence                     3577899999999976433  33567899999999999999999999999999999999999999998888


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+....+......++.                                              ...+.+|+++.+||.+||
T Consensus       215 ~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L  248 (307)
T d1a06a_         215 AKLFEQILKAEYEFDS----------------------------------------------PYWDDISDSAKDFIRHLM  248 (307)
T ss_dssp             HHHHHHHHTTCCCCCT----------------------------------------------TTTTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHhccCCCCCC----------------------------------------------ccccCCCHHHHHHHHHHc
Confidence            7777766553322221                                              122467888999999999


Q ss_pred             ccCCCCCCCHHHHhCCccccC
Q 015867          376 RYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +.||.+|||++|+++||||++
T Consensus       249 ~~dP~~R~s~~eil~hp~~~~  269 (307)
T d1a06a_         249 EKDPEKRFTCEQALQHPWIAG  269 (307)
T ss_dssp             CSSGGGSCCHHHHHHSTTTTS
T ss_pred             cCCHhHCcCHHHHhcCHhhCC
Confidence            999999999999999999985

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-60  Score=435.00  Aligned_cols=251  Identities=25%  Similarity=0.437  Sum_probs=217.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||+||+|++..+|+.||||++.+..    .....+..|+++++.+.      ||||+++++++.+++
T Consensus         8 ~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~l~~~~~~~~   81 (288)
T d1uu3a_           8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD------HPFFVKLYFTFQDDE   81 (288)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCC------STTBCCEEEEEECSS
T ss_pred             CCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcC------CCCeeEEEEEEEECC
Confidence            57999999999999999999999999999999997532    23355778999998875      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||| ||+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||+                  
T Consensus        82 ~~~ivmEy~~gg~L~~~~~~~~--~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll------------------  141 (288)
T d1uu3a_          82 KLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL------------------  141 (288)
T ss_dssp             EEEEEECCCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE------------------
T ss_pred             EEEEEEEccCCCCHHHhhhccC--CCCHHHHHHHHHHHHHHHHhhccccEEcCcCCcccccc------------------
Confidence            999999999 899999998876  59999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                            +.++.+||+|||+|.....     ...+.+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+.
T Consensus       142 ------~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~  215 (288)
T d1uu3a_         142 ------NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE  215 (288)
T ss_dssp             ------CTTSCEEECCCTTCEECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred             ------CCCceEEecccccceecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCH
Confidence                  4567799999999876432     22456899999999999999999999999999999999999999999888


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+...+|......+|                                                  ..+++++++||.+||
T Consensus       216 ~~~~~~i~~~~~~~p--------------------------------------------------~~~s~~~~~li~~~L  245 (288)
T d1uu3a_         216 YLIFQKIIKLEYDFP--------------------------------------------------EKFFPKARDLVEKLL  245 (288)
T ss_dssp             HHHHHHHHTTCCCCC--------------------------------------------------TTCCHHHHHHHHTTS
T ss_pred             HHHHHHHHcCCCCCC--------------------------------------------------ccCCHHHHHHHHHHc
Confidence            777776654322211                                                  346788999999999


Q ss_pred             ccCCCCCCCHHH------HhCCccccCCC
Q 015867          376 RYDPSERLTARQ------ALNHPFFRNLN  398 (399)
Q Consensus       376 ~~dP~~R~t~~e------ll~hp~f~~~~  398 (399)
                      +.||.+|||++|      +++||||++++
T Consensus       246 ~~dP~~R~t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         246 VLDATKRLGCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             CSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             cCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence            999999999987      58999999875

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.7e-60  Score=433.64  Aligned_cols=263  Identities=27%  Similarity=0.500  Sum_probs=227.2

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-------hhhHHHHHHHHHHHHhhhcCCCCCcceeeec
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR  134 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~  134 (399)
                      +.+.++|++.+.||+|+||+||+|++..+|+.||||++.+..       .....+.+|+.+++.+.      ||||++++
T Consensus         6 ~~i~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~   79 (293)
T d1jksa_           6 ENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ------HPNVITLH   79 (293)
T ss_dssp             SCGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCC------CTTBCCEE
T ss_pred             CCcccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCC------CCCCCcEE
Confidence            345678999999999999999999999999999999996422       12456788999999985      59999999


Q ss_pred             eeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          135 NWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       135 ~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                      +++.+.+.+|+||||| ||+|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++.++       
T Consensus        80 ~~~~~~~~~~iv~E~~~gg~L~~~i~~~~--~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~-------  150 (293)
T d1jksa_          80 EVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRN-------  150 (293)
T ss_dssp             EEEECSSEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSS-------
T ss_pred             EEEEECCEEEEEEEcCCCccccchhcccc--ccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCC-------
Confidence            9999999999999999 999999998776  599999999999999999999999999999999999996654       


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCC
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQ  291 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~  291 (399)
                                   .....+||+|||++....  ....+..||+.|+|||++.+..++.++|||||||++|+|++|..||.
T Consensus       151 -------------~~~~~vkl~DfG~a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~  217 (293)
T d1jksa_         151 -------------VPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFL  217 (293)
T ss_dssp             -------------SSSCCEEECCCTTCEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred             -------------CcccceEecchhhhhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCC
Confidence                         234579999999987643  33456789999999999999999999999999999999999999999


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      +.+..+.+..|......++...                                              ++.+|.++.+||
T Consensus       218 ~~~~~~~~~~i~~~~~~~~~~~----------------------------------------------~~~~s~~~~~li  251 (293)
T d1jksa_         218 GDTKQETLANVSAVNYEFEDEY----------------------------------------------FSNTSALAKDFI  251 (293)
T ss_dssp             CSSHHHHHHHHHTTCCCCCHHH----------------------------------------------HTTSCHHHHHHH
T ss_pred             CCCHHHHHHHHHhcCCCCCchh----------------------------------------------cCCCCHHHHHHH
Confidence            9888888877766544433321                                              235678899999


Q ss_pred             HHccccCCCCCCCHHHHhCCccccCCC
Q 015867          372 HGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .+||+.||.+|||++|+|+||||++.+
T Consensus       252 ~~~L~~dP~~R~s~~eil~hp~~~~~~  278 (293)
T d1jksa_         252 RRLLVKDPKKRMTIQDSLQHPWIKPKD  278 (293)
T ss_dssp             HTTSCSSGGGSCCHHHHHHSTTTCC--
T ss_pred             HHHccCChhHCcCHHHHhcCcccCCCC
Confidence            999999999999999999999999754

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.7e-59  Score=437.12  Aligned_cols=251  Identities=27%  Similarity=0.486  Sum_probs=220.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++++.||+|+||.||+|++..+|+.||||++++..    .....+..|+.+++.+.      ||||++++++|.+.+
T Consensus         5 ~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~------hp~Iv~l~~~~~~~~   78 (337)
T d1o6la_           5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR------HPFLTALKYAFQTHD   78 (337)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC------CTTBCCEEEEEECSS
T ss_pred             HhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCC------CCCEEEEEeeecccc
Confidence            47999999999999999999999999999999997532    23455677888888774      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||| ||+|.+++.+.+  .+++..++.++.||+.||+|||++|||||||||+|||+                  
T Consensus        79 ~~~iv~ey~~gg~L~~~~~~~~--~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl------------------  138 (337)
T d1o6la_          79 RLCFVMEYANGGELFFHLSRER--VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML------------------  138 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE------------------
T ss_pred             ccccceeccCCCchhhhhhccc--CCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEe------------------
Confidence            999999999 999999999877  59999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                            +.++.+||+|||+|.....   .....+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.+..+
T Consensus       139 ------~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~  212 (337)
T d1o6la_         139 ------DKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHER  212 (337)
T ss_dssp             ------CTTSCEEECCCTTCBCSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ------cCCCCEEEeecccccccccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHH
Confidence                  4567899999999976432   3356789999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....+......+|                                                  ..+|+++.+||.+||+.
T Consensus       213 ~~~~i~~~~~~~p--------------------------------------------------~~~s~~~~dli~~~L~~  242 (337)
T d1o6la_         213 LFELILMEEIRFP--------------------------------------------------RTLSPEAKSLLAGLLKK  242 (337)
T ss_dssp             HHHHHHHCCCCCC--------------------------------------------------TTSCHHHHHHHHHHTCS
T ss_pred             HHHHHhcCCCCCC--------------------------------------------------ccCCHHHHHHHHhhccC
Confidence            7766655332222                                                  35678899999999999


Q ss_pred             CCCCCC-----CHHHHhCCccccCCC
Q 015867          378 DPSERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       378 dP~~R~-----t~~ell~hp~f~~~~  398 (399)
                      ||.+|+     |++|+++||||++++
T Consensus       243 dP~~R~~~~~~~~~eil~Hp~f~~i~  268 (337)
T d1o6la_         243 DPKQRLGGGPSDAKEVMEHRFFLSIN  268 (337)
T ss_dssp             STTTSTTCSTTTHHHHHTSGGGTTCC
T ss_pred             CchhhcccccccHHHHHcCcccccCC
Confidence            999999     499999999999864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=2.7e-59  Score=434.13  Aligned_cols=251  Identities=27%  Similarity=0.465  Sum_probs=223.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++++.||+|+||+||+|++..+|+.||||+++...    .....+..|+.+++.+.      ||||+++++++.+.+
T Consensus         4 ~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~~~~~~~~   77 (316)
T d1fota_           4 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT------HPFIIRMWGTFQDAQ   77 (316)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCC------BTTBCCEEEEEECSS
T ss_pred             hHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhcc------CcChhheeeeEeeCC
Confidence            46999999999999999999999999999999997532    22355677888888775      599999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||| |++|.+++....  .+++..++.++.||+.||+|||++|||||||||+||||                  
T Consensus        78 ~~~ivmE~~~gg~l~~~~~~~~--~~~~~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NILl------------------  137 (316)
T d1fota_          78 QIFMIMDYIEGGELFSLLRKSQ--RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILL------------------  137 (316)
T ss_dssp             EEEEEECCCCSCBHHHHHHHTS--SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEE------------------
T ss_pred             eeeeEeeecCCccccccccccc--cccccHHHHHHHHHHHhhhhhccCcEEccccCchheeE------------------
Confidence            999999999 999999998876  58999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                            +.++.+||+|||+|........+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+..+...
T Consensus       138 ------~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~  211 (316)
T d1fota_         138 ------DKNGHIKITDFGFAKYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYE  211 (316)
T ss_dssp             ------CTTSCEEECCCSSCEECSSCBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHH
T ss_pred             ------cCCCCEEEecCccceEeccccccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCCCCCCcCHHHHHH
Confidence                  45678999999999988777788899999999999999999999999999999999999999999988888777


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      +|......+|                                                  +.+++++.++|.+||+.||.
T Consensus       212 ~i~~~~~~~p--------------------------------------------------~~~s~~~~~li~~~L~~dp~  241 (316)
T d1fota_         212 KILNAELRFP--------------------------------------------------PFFNEDVKDLLSRLITRDLS  241 (316)
T ss_dssp             HHHHCCCCCC--------------------------------------------------TTSCHHHHHHHHHHTCSCTT
T ss_pred             HHHcCCCCCC--------------------------------------------------CCCCHHHHHHHHHHhhhCHH
Confidence            7755432222                                                  34678889999999999999


Q ss_pred             CCC-----CHHHHhCCccccCCC
Q 015867          381 ERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       381 ~R~-----t~~ell~hp~f~~~~  398 (399)
                      +|+     |++++++||||++++
T Consensus       242 ~R~~~~r~t~~~il~Hp~f~~i~  264 (316)
T d1fota_         242 QRLGNLQNGTEDVKNHPWFKEVV  264 (316)
T ss_dssp             TCTTSSTTTTHHHHTSGGGSSCC
T ss_pred             hccccchhhHHHHHcCcccccCC
Confidence            996     899999999999874

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.6e-59  Score=441.29  Aligned_cols=260  Identities=29%  Similarity=0.447  Sum_probs=224.7

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +.++|++++.||+|+||.||+|++..+|+.||||++.... .....+..|+.+++.++      ||||+++++++.+++.
T Consensus        24 il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~~~~~~~~~   97 (350)
T d1koaa2          24 VLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR------HPTLVNLHDAFEDDNE   97 (350)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTC------CTTBCCEEEEEEETTE
T ss_pred             CccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCC------CCCCCcEEEEEEECCE
Confidence            3468999999999999999999999999999999996533 33456778999998885      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+||||| ||+|.+++.+... .+++..++.|+.||+.||+|||++|||||||||+|||+..                 
T Consensus        98 ~~ivmE~~~gg~L~~~l~~~~~-~l~e~~~~~i~~qi~~aL~ylH~~~iiHrDiKp~NIll~~-----------------  159 (350)
T d1koaa2          98 MVMIYEFMSGGELFEKVADEHN-KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-----------------  159 (350)
T ss_dssp             EEEEECCCCSCBHHHHHTCTTS-CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-----------------
T ss_pred             EEEEEEcCCCCCHHHHHHhhcC-CCCHHHHHHHHHHHHHHHHHHHhcCCeeeeechhHeeecc-----------------
Confidence            99999999 9999999965432 5999999999999999999999999999999999999953                 


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           +.++.+||+|||++......  ..+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+..+.+
T Consensus       160 -----~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~  234 (350)
T d1koaa2         160 -----KRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETL  234 (350)
T ss_dssp             -----TTSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHH
T ss_pred             -----CCCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHH
Confidence                 23678999999998765433  34578999999999999999999999999999999999999999998888888


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..|......++.                                              ...+.+|.++++||.+||+.||
T Consensus       235 ~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~dP  268 (350)
T d1koaa2         235 RNVKSCDWNMDD----------------------------------------------SAFSGISEDGKDFIRKLLLADP  268 (350)
T ss_dssp             HHHHHTCCCSCC----------------------------------------------GGGGGCCHHHHHHHHHHCCSSG
T ss_pred             HHHHhCCCCCCc----------------------------------------------ccccCCCHHHHHHHHHHccCCh
Confidence            777654333221                                              1224578889999999999999


Q ss_pred             CCCCCHHHHhCCccccCCC
Q 015867          380 SERLTARQALNHPFFRNLN  398 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~~  398 (399)
                      .+|||++|+|+||||++.+
T Consensus       269 ~~R~t~~eil~hp~~~~~~  287 (350)
T d1koaa2         269 NTRMTIHQALEHPWLTPGN  287 (350)
T ss_dssp             GGSCCHHHHHHSTTTSCTT
T ss_pred             hHCcCHHHHhcCcccCCCC
Confidence            9999999999999998753

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-60  Score=431.53  Aligned_cols=253  Identities=28%  Similarity=0.479  Sum_probs=216.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc-hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI-RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +.|++++.||+|+||+||+|++..+++.||||+++.. ......+..|+++++.+.      ||||+++++++.+++.+|
T Consensus        12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~------HpnIv~l~~~~~~~~~~~   85 (288)
T d2jfla1          12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD------HPNIVKLLDAFYYENNLW   85 (288)
T ss_dssp             GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCC------CTTBCCEEEEEEETTEEE
T ss_pred             cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCC------CCCCCeEEEEEeeCCeEE
Confidence            4599999999999999999999999999999999753 344467888999999885      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||| +|+|.+++.+... .+++..++.++.||+.||+|||++|||||||||+|||+                     
T Consensus        86 lvmEy~~~g~L~~~~~~~~~-~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll---------------------  143 (288)
T d2jfla1          86 ILIEFCAGGAVDAVMLELER-PLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILF---------------------  143 (288)
T ss_dssp             EEEECCTTEEHHHHHHHHTS-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE---------------------
T ss_pred             EEEecCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeE---------------------
Confidence            999999 9999999876432 59999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhh-----CCCCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVIL-----GLGWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~-----~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                         +.++.+||+|||+|......   ..+.+||+.|+|||++.     +..|+.++|||||||++|+|++|+.||.+.+.
T Consensus       144 ---~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~  220 (288)
T d2jfla1         144 ---TLDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNP  220 (288)
T ss_dssp             ---CTTSCEEECCCTTCEECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCG
T ss_pred             ---CCCCCEEEEechhhhccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCH
Confidence               44677999999998653322   24578999999999984     45689999999999999999999999998887


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+.+..+.....+.                                               ...+..+|.++.+||.+||
T Consensus       221 ~~~~~~i~~~~~~~-----------------------------------------------~~~~~~~s~~~~~li~~~L  253 (288)
T d2jfla1         221 MRVLLKIAKSEPPT-----------------------------------------------LAQPSRWSSNFKDFLKKCL  253 (288)
T ss_dssp             GGHHHHHHHSCCCC-----------------------------------------------CSSGGGSCHHHHHHHHHHS
T ss_pred             HHHHHHHHcCCCCC-----------------------------------------------CCccccCCHHHHHHHHHHc
Confidence            77776665432110                                               0122467888999999999


Q ss_pred             ccCCCCCCCHHHHhCCccccC
Q 015867          376 RYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +.||.+|||++|+|+||||+.
T Consensus       254 ~~dp~~R~t~~ell~hp~~~~  274 (288)
T d2jfla1         254 EKNVDARWTTSQLLQHPFVTV  274 (288)
T ss_dssp             CSSTTTSCCHHHHTTSGGGCC
T ss_pred             cCChhHCcCHHHHhcCcccCC
Confidence            999999999999999999975

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5e-60  Score=441.03  Aligned_cols=296  Identities=23%  Similarity=0.323  Sum_probs=212.9

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ...++|++++.||+|+||+||+|++..+|+.||+|+++..  ......+.+|+.+++.+      .||||++++++|.+.
T Consensus         3 l~~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l------~HpnIv~l~~~~~~~   76 (322)
T d1s9ja_           3 LKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC------NSPYIVGFYGAFYSD   76 (322)
T ss_dssp             CCGGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGC------CCTTBCCEEEEEECS
T ss_pred             CCccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhC------CCCCCCcEEEEEEEC
Confidence            4467899999999999999999999999999999999753  23345566677777666      469999999999999


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC-CccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDL-RLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~-givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      +.+|+||||+ ||+|.+++.+.+  .+++..++.++.||+.||.|||++ ||+||||||+||||                
T Consensus        77 ~~~~iVmEy~~gg~L~~~l~~~~--~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl----------------  138 (322)
T d1s9ja_          77 GEISICMEHMDGGSLDQVLKKAG--RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILV----------------  138 (322)
T ss_dssp             SEEEEEEECCTTEEHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEE----------------
T ss_pred             CEEEEEEEcCCCCcHHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeE----------------
Confidence            9999999999 899999998776  599999999999999999999974 99999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccC-CCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFD-NQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                              +.++.+||+|||+|... .....+.+||+.|+|||++.+..|+.++|||||||++|||++|+.||.+.+..+
T Consensus       139 --------~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~  210 (322)
T d1s9ja_         139 --------NSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE  210 (322)
T ss_dssp             --------CTTCCEEECCCCCCHHHHHHTC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTH
T ss_pred             --------CCCCCEEEeeCCCccccCCCccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH
Confidence                    44677999999998753 233456799999999999999999999999999999999999999998765443


Q ss_pred             HH-HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          298 HL-AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       298 ~~-~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      .. ..+....+...... ........... ......-|.. ...+......    ...........+|.++.|||.+||+
T Consensus       211 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~~~s~~~~dli~~~L~  283 (322)
T d1s9ja_         211 LELMFGCQVEGDAAETP-PRPRTPGRPLS-SYGMDSRPPM-AIFELLDYIV----NEPPPKLPSGVFSLEFQDFVNKCLI  283 (322)
T ss_dssp             HHHHC--------------------------------CCC-CHHHHHHHHH----TSCCCCCCBTTBCHHHHHHHHHHTC
T ss_pred             HHHHHHHHhcCCcccCC-ccccccccccc-ccccccccch-hHHHHHhhhh----ccCCccCccccCCHHHHHHHHHHcC
Confidence            32 22222221111100 00000000000 0000000000 0000000000    0001112223467899999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCC
Q 015867          377 YDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .||.+|||++|+|+||||++.
T Consensus       284 ~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         284 KNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             SSTTTSCCHHHHHTSHHHHHH
T ss_pred             CChhHCcCHHHHhhCHhhCcC
Confidence            999999999999999999864

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-59  Score=421.70  Aligned_cols=254  Identities=23%  Similarity=0.412  Sum_probs=208.7

Q ss_pred             CccCCCE-EEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           62 ENLTPRY-KILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        62 ~~~~~~y-~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ....++| ++.++||+|+||+||+|++..+++.||+|++....   .....+.+|+++++.++      ||||+++++++
T Consensus         4 ~~~~gry~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~~~~   77 (270)
T d1t4ha_           4 MSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQ------HPNIVRFYDSW   77 (270)
T ss_dssp             ECTTSCEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCC------CTTBCCEEEEE
T ss_pred             cCCCCCEEEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCC------CCCeeeEEEEE
Confidence            3445566 78889999999999999999999999999987532   23345667888877764      69999999998


Q ss_pred             cc----CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCC--ccccCCCCCcEEEeecccccC
Q 015867          138 DY----RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLR--LIHTDLKPENILLVSSEFIKL  210 (399)
Q Consensus       138 ~~----~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~g--ivH~Dikp~NIll~~~~~~~~  210 (399)
                      .+    ...+|+||||+ +++|.+++.+..  .+++..++.++.||+.||+|||++|  |+||||||+|||++       
T Consensus        78 ~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~~~~~~~~~~~~qi~~gl~yLH~~~~~IiHrDiKp~NILl~-------  148 (270)
T d1t4ha_          78 ESTVKGKKCIVLVTELMTSGTLKTYLKRFK--VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFIT-------  148 (270)
T ss_dssp             EEESSSCEEEEEEEECCCSCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEES-------
T ss_pred             eeccccCCEEEEEEeCCCCCcHHHHHhccc--cccHHHHHHHHHHHHHHHHHHHHCCCCEEeCCcChhhceee-------
Confidence            65    45789999999 999999998766  5999999999999999999999999  99999999999994       


Q ss_pred             CCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          211 PGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                      +.++.+||+|||++..... ...+.+||+.|||||++.+ .|+.++|||||||++|+|++|+.|
T Consensus       149 ----------------~~~~~~Kl~DFGla~~~~~~~~~~~~GT~~Y~aPE~~~~-~~~~~~DIwSlGvilyel~~g~~P  211 (270)
T d1t4ha_         149 ----------------GPTGSVKIGDLGLATLKRASFAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYP  211 (270)
T ss_dssp             ----------------STTSCEEECCTTGGGGCCTTSBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCT
T ss_pred             ----------------CCCCCEEEeecCcceeccCCccCCcccCccccCHHHhCC-CCCCcCchhhHHHHHHHHHHCCCC
Confidence                            2367899999999976443 3456789999999999876 599999999999999999999999


Q ss_pred             CCCCCcHHHHH-HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          290 FQTHENLEHLA-MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       290 f~~~~~~~~~~-~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      |.+......+. .+...  ..|.                                              .....+++++.
T Consensus       212 f~~~~~~~~~~~~i~~~--~~~~----------------------------------------------~~~~~~~~~~~  243 (270)
T d1t4ha_         212 YSECQNAAQIYRRVTSG--VKPA----------------------------------------------SFDKVAIPEVK  243 (270)
T ss_dssp             TTTCSSHHHHHHHHTTT--CCCG----------------------------------------------GGGGCCCHHHH
T ss_pred             CCCcccHHHHHHHHHcC--CCCc----------------------------------------------ccCccCCHHHH
Confidence            98766544332 22111  1110                                              11234577889


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCcccc
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFR  395 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~  395 (399)
                      +||.+||+.||.+|||++|+|+||||+
T Consensus       244 ~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         244 EIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             HHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             HHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            999999999999999999999999996

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.6e-59  Score=438.44  Aligned_cols=259  Identities=27%  Similarity=0.468  Sum_probs=223.0

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      +.++|++++.||+|+||.||+|++..+|+.||||+++... .....+..|+++++.+.      ||||++++++|.+++.
T Consensus        27 ~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~------HpnIv~~~~~~~~~~~  100 (352)
T d1koba_          27 VYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH------HPKLINLHDAFEDKYE  100 (352)
T ss_dssp             GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCC------STTBCCEEEEEECSSE
T ss_pred             cccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCC------CCCCCcEEEEEEECCE
Confidence            3467999999999999999999999999999999997543 23345667888877764      6999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+||||| ||+|.+++...+. .+++..++.|+.||+.||+|||++|||||||||+||||+.                 
T Consensus       101 ~~ivmE~~~gg~L~~~~~~~~~-~l~e~~~~~i~~qi~~aL~ylH~~~iiHRDiKp~NILl~~-----------------  162 (352)
T d1koba_         101 MVLILEFLSGGELFDRIAAEDY-KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-----------------  162 (352)
T ss_dssp             EEEEEECCCCCBHHHHTTCTTC-CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESS-----------------
T ss_pred             EEEEEEcCCCChHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHCCeeecccccccccccc-----------------
Confidence            99999999 9999998765542 5999999999999999999999999999999999999953                 


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                           ..++.+||+|||+|......  .....||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..+.+
T Consensus       163 -----~~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~  237 (352)
T d1koba_         163 -----KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETL  237 (352)
T ss_dssp             -----TTCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHH
T ss_pred             -----cCCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                 24678999999999875443  34568999999999999999999999999999999999999999999888888


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..|......+|.                                              ...+.+|.++.+||.+||+.||
T Consensus       238 ~~i~~~~~~~~~----------------------------------------------~~~~~~s~~~~~li~~~L~~dp  271 (352)
T d1koba_         238 QNVKRCDWEFDE----------------------------------------------DAFSSVSPEAKDFIKNLLQKEP  271 (352)
T ss_dssp             HHHHHCCCCCCS----------------------------------------------STTTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHhCCCCCCc----------------------------------------------ccccCCCHHHHHHHHHHccCCh
Confidence            877665433332                                              1124578889999999999999


Q ss_pred             CCCCCHHHHhCCccccCC
Q 015867          380 SERLTARQALNHPFFRNL  397 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~~  397 (399)
                      .+|||++|+|+||||++.
T Consensus       272 ~~R~s~~eil~Hp~~~~~  289 (352)
T d1koba_         272 RKRLTVHDALEHPWLKGD  289 (352)
T ss_dssp             GGSCCHHHHHTSTTTSSC
T ss_pred             hHCcCHHHHhcCHhhCCC
Confidence            999999999999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=9e-59  Score=436.36  Aligned_cols=251  Identities=26%  Similarity=0.466  Sum_probs=222.2

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++++.||+|+||.||+|++..+|+.||||++.+..    .....+..|+++++.+      .||||+++++++.+.+
T Consensus        41 d~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l------~hpnIv~~~~~~~~~~  114 (350)
T d1rdqe_          41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPFLVKLEFSFKDNS  114 (350)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTC------CCTTBCCEEEEEECSS
T ss_pred             cCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHc------CCCcEeeccccccccc
Confidence            57999999999999999999999999999999996432    2234566777777766      4699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||+ ||+|.+++.+.+  .+++..++.|+.||+.||.|||++|||||||||+||||                  
T Consensus       115 ~~~~v~e~~~~g~l~~~l~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl------------------  174 (350)
T d1rdqe_         115 NLYMVMEYVAGGEMFSHLRRIG--RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI------------------  174 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHC--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE------------------
T ss_pred             ccccccccccccchhhhHhhcC--CCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHccc------------------
Confidence            999999999 999999998876  59999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHLA  300 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~  300 (399)
                            +.++.+||+|||+|........+.+||+.|||||++.+..|+.++|||||||++|+|++|+.||.+.+......
T Consensus       175 ------~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~  248 (350)
T d1rdqe_         175 ------DQQGYIQVTDFGFAKRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYE  248 (350)
T ss_dssp             ------CTTSCEEECCCTTCEECSSCBCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHH
T ss_pred             ------CCCCCEEeeeceeeeecccccccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHH
Confidence                  45678999999999887777778899999999999999999999999999999999999999999888877777


Q ss_pred             HHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCC
Q 015867          301 MMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPS  380 (399)
Q Consensus       301 ~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~  380 (399)
                      .|......+|                                                  ..+++++.+||.+||+.||.
T Consensus       249 ~i~~~~~~~p--------------------------------------------------~~~s~~~~~li~~~L~~dP~  278 (350)
T d1rdqe_         249 KIVSGKVRFP--------------------------------------------------SHFSSDLKDLLRNLLQVDLT  278 (350)
T ss_dssp             HHHHCCCCCC--------------------------------------------------TTCCHHHHHHHHHHSCSCTT
T ss_pred             HHhcCCCCCC--------------------------------------------------ccCCHHHHHHHHHHhhhCHH
Confidence            7755432222                                                  35678899999999999999


Q ss_pred             CCC-----CHHHHhCCccccCCC
Q 015867          381 ERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       381 ~R~-----t~~ell~hp~f~~~~  398 (399)
                      +|+     |++||++||||++++
T Consensus       279 kR~~~~r~t~~ell~Hp~f~~~~  301 (350)
T d1rdqe_         279 KRFGNLKNGVNDIKNHKWFATTD  301 (350)
T ss_dssp             TCTTSSTTTTHHHHTSGGGTTCC
T ss_pred             hccccccccHHHHHcCccccCCC
Confidence            995     999999999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-59  Score=432.49  Aligned_cols=259  Identities=24%  Similarity=0.413  Sum_probs=228.5

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.++|++.+.||+|+||+||+|.+..+++.||||+++........+..|+++++.+.      ||||++++++|.+++.
T Consensus         2 ~~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~~~~~~~~~Ei~il~~l~------HpnIv~~~~~~~~~~~   75 (321)
T d1tkia_           2 ELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR------HRNILHLHESFESMEE   75 (321)
T ss_dssp             CCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCTHHHHHHHHHHHHHHHSC------CTTBCCEEEEEEETTE
T ss_pred             CCccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCcccHHHHHHHHHHHHhCC------CCCCCeEEEEEEECCE
Confidence            3567899999999999999999999999999999999876655666778999998875      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +|+||||| |++|.+++...+. .+++..++.|+.||+.||+|||++||+||||||+|||++.+                
T Consensus        76 ~~lvmE~~~gg~L~~~i~~~~~-~l~e~~~~~i~~qi~~al~yLH~~~iiHrDlKp~NIll~~~----------------  138 (321)
T d1tkia_          76 LVMIFEFISGLDIFERINTSAF-ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR----------------  138 (321)
T ss_dssp             EEEEECCCCCCBHHHHHTSSSC-CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS----------------
T ss_pred             EEEEEecCCCCcHHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHHHcCCCcccccccceeecCC----------------
Confidence            99999999 8999999976542 59999999999999999999999999999999999999542                


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLEHL  299 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~  299 (399)
                            ....+||+|||++......  ....+||+.|+|||.+.+..|+.++|||||||++|+|++|..||.+.+..+..
T Consensus       139 ------~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~  212 (321)
T d1tkia_         139 ------RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQII  212 (321)
T ss_dssp             ------SCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHH
T ss_pred             ------CceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCCCCCCCCHHHHH
Confidence                  3567999999998765433  34567999999999999999999999999999999999999999999998888


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..|......++...                                              ++.+|.++.+||.+||+.||
T Consensus       213 ~~i~~~~~~~~~~~----------------------------------------------~~~~s~~~~~li~~~L~~dp  246 (321)
T d1tkia_         213 ENIMNAEYTFDEEA----------------------------------------------FKEISIEAMDFVDRLLVKER  246 (321)
T ss_dssp             HHHHHTCCCCCHHH----------------------------------------------HTTSCHHHHHHHHTTSCSSG
T ss_pred             HHHHhCCCCCChhh----------------------------------------------ccCCCHHHHHHHHHHccCCh
Confidence            88877655555432                                              13567889999999999999


Q ss_pred             CCCCCHHHHhCCccccC
Q 015867          380 SERLTARQALNHPFFRN  396 (399)
Q Consensus       380 ~~R~t~~ell~hp~f~~  396 (399)
                      .+|||++|+|+||||++
T Consensus       247 ~~R~s~~eil~hp~~~~  263 (321)
T d1tkia_         247 KSRMTASEALQHPWLKQ  263 (321)
T ss_dssp             GGSCCHHHHHHSHHHHS
T ss_pred             hHCcCHHHHhcCHhhcc
Confidence            99999999999999975

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=7.5e-58  Score=416.52  Aligned_cols=256  Identities=30%  Similarity=0.521  Sum_probs=221.1

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----------hhhHHHHHHHHHHHHhhhcCCCCCcceeee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQI  133 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~  133 (399)
                      |.++|++.+.||+|+||+||+|++..+|+.||||+++...          .....+..|+.+++.+.     .||||+++
T Consensus         1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~-----~hpnIv~~   75 (277)
T d1phka_           1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVS-----GHPNIIQL   75 (277)
T ss_dssp             CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHT-----TCTTBCCE
T ss_pred             CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEE
Confidence            4578999999999999999999999999999999986532          12345777999999986     36999999


Q ss_pred             ceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          134 RNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       134 ~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      ++++.+++.+||||||| +++|.+++...+  .+++..++.++.||+.||+|||++||+||||||+|||+          
T Consensus        76 ~~~~~~~~~~~ivmE~~~~g~L~~~l~~~~--~l~e~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill----------  143 (277)
T d1phka_          76 KDTYETNTFFFLVFDLMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL----------  143 (277)
T ss_dssp             EEEEECSSEEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE----------
T ss_pred             EeecccCcceEEEEEcCCCchHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHcCCcccccccceEEE----------
Confidence            99999999999999999 899999998766  69999999999999999999999999999999999999          


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhC------CCCCCcchhHHHHHHHHHHH
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILG------LGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~------~~~~~~~DiwslG~il~ell  284 (399)
                                    +.++.+||+|||++.....  .....+||+.|+|||++.+      ..++.++||||+||++|+|+
T Consensus       144 --------------~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml  209 (277)
T d1phka_         144 --------------DDDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLL  209 (277)
T ss_dssp             --------------CTTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHH
T ss_pred             --------------cCCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhc
Confidence                          4577899999999976443  3455789999999999863      35788999999999999999


Q ss_pred             hCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhh
Q 015867          285 TGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRAR  364 (399)
Q Consensus       285 ~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  364 (399)
                      +|+.||.+.+..+....+......++.                                              ...+.+|
T Consensus       210 ~g~~Pf~~~~~~~~~~~i~~~~~~~~~----------------------------------------------~~~~~~s  243 (277)
T d1phka_         210 AGSPPFWHRKQMLMLRMIMSGNYQFGS----------------------------------------------PEWDDYS  243 (277)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHTCCCCCT----------------------------------------------TTGGGSC
T ss_pred             cCCCCCCCCCHHHHHHHHHhCCCCCCC----------------------------------------------cccccCC
Confidence            999999998887777777654322211                                              1224678


Q ss_pred             hHHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          365 STLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       365 ~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      +++.+||.+||+.||.+|||++|+|+||||++
T Consensus       244 ~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~  275 (277)
T d1phka_         244 DTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ  275 (277)
T ss_dssp             HHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHcCHHHHH
Confidence            89999999999999999999999999999986

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-59  Score=421.71  Aligned_cols=251  Identities=22%  Similarity=0.353  Sum_probs=200.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--  139 (399)
                      .++|++++.||+|+||+||+|++..+|+.||||++....   .....+..|+++++.+      .||||+++++++.+  
T Consensus         3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l------~HpnIv~~~~~~~~~~   76 (269)
T d2java1           3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLREL------KHPNIVRYYDRIIDRT   76 (269)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSC------CCTTBCCEEEEEEC--
T ss_pred             chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHC------CCCCEeeEEEEEEeCC
Confidence            357999999999999999999999999999999986532   2234455666666655      46999999998865  


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCC-----ccccCCCCCcEEEeecccccCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRN--KYCPFPVDLVREFGRQLLESVAYMHDLR-----LIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~~~i~~qi~~~L~~lH~~g-----ivH~Dikp~NIll~~~~~~~~~  211 (399)
                      .+.+|+||||| +|+|.+++.+.  ....+++..++.++.||+.||+|||++|     ||||||||+|||+         
T Consensus        77 ~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll---------  147 (269)
T d2java1          77 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFL---------  147 (269)
T ss_dssp             --CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEE---------
T ss_pred             CCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCc---------
Confidence            46789999999 99999998642  2236999999999999999999999976     9999999999999         


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCC
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEA  288 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~  288 (399)
                                     +.++.+||+|||++.....   .....+||+.|||||++.+..|+.++|||||||++|||++|+.
T Consensus       148 ---------------~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~  212 (269)
T d2java1         148 ---------------DGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMP  212 (269)
T ss_dssp             ---------------CTTSCEEECCHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             ---------------CCCCcEEEeeccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCC
Confidence                           4567899999999876432   2346789999999999999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHH
Q 015867          289 LFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       289 Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (399)
                      ||.+.+..+....|......                                                 ..+..+|+++.
T Consensus       213 Pf~~~~~~~~~~~i~~~~~~-------------------------------------------------~~~~~~s~~l~  243 (269)
T d2java1         213 PFTAFSQKELAGKIREGKFR-------------------------------------------------RIPYRYSDELN  243 (269)
T ss_dssp             SCCCSSHHHHHHHHHHTCCC-------------------------------------------------CCCTTSCHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCC-------------------------------------------------CCCcccCHHHH
Confidence            99988887777666543211                                                 11235678899


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCccc
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFF  394 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f  394 (399)
                      +||.+||+.||.+|||++|+|+|||+
T Consensus       244 ~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         244 EIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             HHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             HHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            99999999999999999999999996

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-58  Score=424.77  Aligned_cols=252  Identities=25%  Similarity=0.418  Sum_probs=216.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||+||+|++..+|+.||||++++..    ........|..++...     .+||||+++++++.+.+
T Consensus         2 ddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~-----~~hp~Iv~~~~~~~~~~   76 (320)
T d1xjda_           2 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLA-----WEHPFLTHMFCTFQTKE   76 (320)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHH-----TTCTTBCCEEEEEECSS
T ss_pred             CCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHh-----CCCCcEEEEEEEEccCC
Confidence            57999999999999999999999999999999997532    2223455566655432     24799999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||+ +|+|.+++....  .+++..++.++.||+.||+|||++||+||||||+|||+                  
T Consensus        77 ~~yivmEy~~~g~L~~~i~~~~--~~~e~~~~~~~~qi~~al~ylH~~~iiHrDikp~NiL~------------------  136 (320)
T d1xjda_          77 NLFFVMEYLNGGDLMYHIQSCH--KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL------------------  136 (320)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHS--SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEE------------------
T ss_pred             ceeEEEeecCCCcHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCcccceee------------------
Confidence            999999999 999999998776  59999999999999999999999999999999999998                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCC---CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDN---QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                            +.++.+||+|||++....   ......+||+.|+|||++.+..|+.++|||||||++|+|++|+.||.+.+..+
T Consensus       137 ------~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~PF~~~~~~~  210 (320)
T d1xjda_         137 ------DKDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE  210 (320)
T ss_dssp             ------CTTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH
T ss_pred             ------cCCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCCCCCCCCHHH
Confidence                  456789999999987533   23345689999999999999999999999999999999999999999988877


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      ....|......+                                                  +..+|.++.+||.+||+.
T Consensus       211 ~~~~i~~~~~~~--------------------------------------------------p~~~s~~~~dli~~~L~~  240 (320)
T d1xjda_         211 LFHSIRMDNPFY--------------------------------------------------PRWLEKEAKDLLVKLFVR  240 (320)
T ss_dssp             HHHHHHHCCCCC--------------------------------------------------CTTSCHHHHHHHHHHSCS
T ss_pred             HHHHHHcCCCCC--------------------------------------------------CccCCHHHHHHHHHhccc
Confidence            777665432221                                                  134678899999999999


Q ss_pred             CCCCCCCHH-HHhCCccccCCC
Q 015867          378 DPSERLTAR-QALNHPFFRNLN  398 (399)
Q Consensus       378 dP~~R~t~~-ell~hp~f~~~~  398 (399)
                      ||.+|||+. |+++||||++++
T Consensus       241 dP~~R~s~~~~l~~hpff~~~~  262 (320)
T d1xjda_         241 EPEKRLGVRGDIRQHPLFREIN  262 (320)
T ss_dssp             SGGGSBTTBSCGGGSGGGTTCC
T ss_pred             CCCCCcCHHHHHHhCchhccCC
Confidence            999999995 899999999874

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.6e-58  Score=423.85  Aligned_cols=284  Identities=30%  Similarity=0.516  Sum_probs=227.1

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccC-CeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQT-QERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~-~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-  139 (399)
                      .++|++++.||+|+||+||+|++..+ ++.||||+++...   .......+|+.+++.+..   ..||||++++++|.. 
T Consensus         6 ~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~---~~HpnIv~~~~~~~~~   82 (305)
T d1blxa_           6 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET---FEHPNVVRLFDVCTVS   82 (305)
T ss_dssp             GGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHH---TCCTTBCCEEEEEEEE
T ss_pred             cCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhh---cCCCCcceeeeeeccc
Confidence            46899999999999999999998655 7789999986432   223456678888888764   257999999998853 


Q ss_pred             ----CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          140 ----RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       140 ----~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                          ....+++|||+.+.+..+........+++..++.++.||+.||+|||++|||||||||+|||+             
T Consensus        83 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi-------------  149 (305)
T d1blxa_          83 RTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILV-------------  149 (305)
T ss_dssp             ECSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-------------
T ss_pred             ccccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEE-------------
Confidence                457899999996555555555555579999999999999999999999999999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                                 +..+.+||+|||++.....  .....+||+.|+|||++.+..|+.++|||||||++|||++|++||.+.
T Consensus       150 -----------~~~~~~kl~dfg~~~~~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~  218 (305)
T d1blxa_         150 -----------TSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGS  218 (305)
T ss_dssp             -----------CTTCCEEECSCCSCCCCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred             -----------cCCCCeeecchhhhhhhcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCC
Confidence                       4567899999999875432  235678999999999999999999999999999999999999999999


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+.+..+....+.++...++.........+...                       ...........+++.+.+||.+
T Consensus       219 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~s~~~~dli~~  275 (305)
T d1blxa_         219 SDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSK-----------------------SAQPIEKFVTDIDELGKDLLLK  275 (305)
T ss_dssp             SHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCC-----------------------CCCCGGGTCCSCCHHHHHHHHH
T ss_pred             CHHHHHHHHHHhhCCCchhcccccccchhhhhccc-----------------------cccchhhccccCCHHHHHHHHH
Confidence            99999999999888776543332221111111111                       0011122345678889999999


Q ss_pred             ccccCCCCCCCHHHHhCCccccCCC
Q 015867          374 LLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ||+.||.+|||++|+|+||||++++
T Consensus       276 mL~~dP~~R~sa~e~L~Hpff~~i~  300 (305)
T d1blxa_         276 CLTFNPAKRISAYSALSHPYFQDLE  300 (305)
T ss_dssp             HSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred             HCcCChhHCcCHHHHhcChhhcCch
Confidence            9999999999999999999999985

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.2e-57  Score=430.86  Aligned_cols=257  Identities=26%  Similarity=0.436  Sum_probs=211.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh----hhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK----YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|++..+|+.||||++.....    .......|..+++.+.+   ..||||+++++++.+.+
T Consensus         4 ddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~---~~hpnIv~l~~~~~~~~   80 (364)
T d1omwa3           4 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVST---GDCPFIVCMSYAFHTPD   80 (364)
T ss_dssp             TTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSS---SCCTTBCCEEEEEECSS
T ss_pred             HhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhc---CCCCcEEEEEEEEEECC
Confidence            479999999999999999999999999999999964321    22334455555555543   46899999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+|+||||| |++|.+++.+..  .+++..++.|+.||+.||+|||++|||||||||+|||+                  
T Consensus        81 ~~~ivmE~~~gg~L~~~l~~~~--~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl------------------  140 (364)
T d1omwa3          81 KLSFILDLMNGGDLHYHLSQHG--VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL------------------  140 (364)
T ss_dssp             EEEEEECCCCSCBHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE------------------
T ss_pred             EEEEEEEecCCCcHHHHHHhcc--cccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEE------------------
Confidence            999999999 999999998876  59999999999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCC-CCCcccccCCCccchhhhhC-CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDN-QNHSSIVSTRHYRAPEVILG-LGWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~-~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                            +.++.+||+|||+|.... ......+||+.|+|||++.. ..|+.++|||||||++|+|++|+.||.+.+..+.
T Consensus       141 ------~~~g~iKl~DFGla~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~  214 (364)
T d1omwa3         141 ------DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK  214 (364)
T ss_dssp             ------CSSSCEEECCCTTCEECSSSCCCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCH
T ss_pred             ------cCCCcEEEeeeceeeecCCCcccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHH
Confidence                  456789999999987643 34456789999999999974 5799999999999999999999999987554332


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      .. +......                                              .....++.+|+++.+||.+||+.|
T Consensus       215 ~~-~~~~~~~----------------------------------------------~~~~~~~~~s~~~~~li~~~L~~d  247 (364)
T d1omwa3         215 HE-IDRMTLT----------------------------------------------MAVELPDSFSPELRSLLEGLLQRD  247 (364)
T ss_dssp             HH-HHHHSSS----------------------------------------------CCCCCCSSSCHHHHHHHHHHTCSS
T ss_pred             HH-HHHhccc----------------------------------------------CCCCCCCCCCHHHHHHHHHHcccC
Confidence            22 1111100                                              011223457888999999999999


Q ss_pred             CCCCCC-----HHHHhCCccccCCC
Q 015867          379 PSERLT-----ARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t-----~~ell~hp~f~~~~  398 (399)
                      |.+|||     |+|+++||||++++
T Consensus       248 P~~R~t~~~~~a~eil~Hp~f~~i~  272 (364)
T d1omwa3         248 VNRRLGCLGRGAQEVKESPFFRSLD  272 (364)
T ss_dssp             TTTSTTTSSSTHHHHHTSGGGTTCC
T ss_pred             HHHhCCCcccCHHHHHcCccccCCC
Confidence            999999     89999999999874

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3.2e-58  Score=425.30  Aligned_cols=250  Identities=26%  Similarity=0.374  Sum_probs=212.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      +.|++++.||+|+||+||+|++..+++.||||+++...    .....+..|+++++.+.      ||||+++++++.+++
T Consensus        15 ~~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~------HpnIv~~~~~~~~~~   88 (309)
T d1u5ra_          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR------HPNTIQYRGCYLREH   88 (309)
T ss_dssp             HHEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCC------CTTBCCEEEEEEETT
T ss_pred             HhcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCC------CCCEeeEEEEEEECC
Confidence            35999999999999999999999999999999997532    22244667888877764      699999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..|+||||| +++|..++...+  .+++..++.++.||+.||.|||++|||||||||+|||++                 
T Consensus        89 ~~~iv~E~~~~g~l~~~~~~~~--~l~e~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~-----------------  149 (309)
T d1u5ra_          89 TAWLVMEYCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS-----------------  149 (309)
T ss_dssp             EEEEEEECCSEEHHHHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE-----------------
T ss_pred             EEEEEEEecCCCchHHHHHhCC--CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEC-----------------
Confidence            999999999 778876666654  699999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhC---CCCCCcchhHHHHHHHHHHHhCCCCCCCCCcHH
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILG---LGWSYPCDMWSVGCILVELCTGEALFQTHENLE  297 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~---~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~  297 (399)
                             .++.+||+|||++..... ....+||+.|||||++.+   ..|+.++|||||||++|||++|..||.+.+..+
T Consensus       150 -------~~~~~Kl~DFG~a~~~~~-~~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~  221 (309)
T d1u5ra_         150 -------EPGLVKLGDFGSASIMAP-ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS  221 (309)
T ss_dssp             -------TTTEEEECCCTTCBSSSS-BCCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH
T ss_pred             -------CCCCEEEeecccccccCC-CCccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHH
Confidence                   467799999999976543 345789999999999964   468999999999999999999999999888777


Q ss_pred             HHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcccc
Q 015867          298 HLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRY  377 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~  377 (399)
                      .+..+.....+.                                                .....+|+++.+||.+||+.
T Consensus       222 ~~~~i~~~~~~~------------------------------------------------~~~~~~s~~~~~li~~~L~~  253 (309)
T d1u5ra_         222 ALYHIAQNESPA------------------------------------------------LQSGHWSEYFRNFVDSCLQK  253 (309)
T ss_dssp             HHHHHHHSCCCC------------------------------------------------CSCTTSCHHHHHHHHHHTCS
T ss_pred             HHHHHHhCCCCC------------------------------------------------CCCCCCCHHHHHHHHHHCcC
Confidence            766665432111                                                11134678899999999999


Q ss_pred             CCCCCCCHHHHhCCccccC
Q 015867          378 DPSERLTARQALNHPFFRN  396 (399)
Q Consensus       378 dP~~R~t~~ell~hp~f~~  396 (399)
                      ||.+|||++|+|+||||++
T Consensus       254 dP~~Rpt~~ell~Hp~~~~  272 (309)
T d1u5ra_         254 IPQDRPTSEVLLKHRFVLR  272 (309)
T ss_dssp             SGGGSCCHHHHTTCHHHHS
T ss_pred             ChhHCcCHHHHHhCHHhcC
Confidence            9999999999999999975

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.1e-58  Score=421.56  Aligned_cols=282  Identities=33%  Similarity=0.547  Sum_probs=228.4

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++++.||+|+||+||+|.+..+|+.||||+++...   .....+..|+++++.+.      ||||+++++++.+.+.
T Consensus         2 d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~------Hp~Iv~~~~~~~~~~~   75 (298)
T d1gz8a_           2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN------HPNIVKLLDVIHTENK   75 (298)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCC------CTTBCCEEEEEEETTE
T ss_pred             CCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC------CCcEEEeccccccccc
Confidence            57999999999999999999999999999999996432   22456677888887764      6999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      +|+||||+++++.+++.......+++..++.++.||+.||+|||++|||||||||+|||+                    
T Consensus        76 ~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~--------------------  135 (298)
T d1gz8a_          76 LYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI--------------------  135 (298)
T ss_dssp             EEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE--------------------
T ss_pred             eeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheee--------------------
Confidence            999999998888888776655679999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                          +.++.+||+|||.|.....   .....+||+.|+|||++.... ++.++|||||||++|+|++|+.||.+.+..+.
T Consensus       136 ----~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~  211 (298)
T d1gz8a_         136 ----NTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQ  211 (298)
T ss_dssp             ----CTTSCEEECSTTHHHHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ----cccCcceeccCCcceeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHH
Confidence                4567899999998865432   234568999999999988765 57899999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +..+....+.++...+.........      ...++...               ........+.++.++.+||.+||+.|
T Consensus       212 ~~~i~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~---------------~~~~~~~~~~~s~~~~dll~~mL~~d  270 (298)
T d1gz8a_         212 LFRIFRTLGTPDEVVWPGVTSMPDY------KPSFPKWA---------------RQDFSKVVPPLDEDGRSLLSQMLHYD  270 (298)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGSTTC------CTTSCCCC---------------CCCHHHHSTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhcCCCchhhcccccccccc------cccccccc---------------ccchhhhccCCCHHHHHHHHHHccCC
Confidence            9999888877665544332221110      00111100               00011223467889999999999999


Q ss_pred             CCCCCCHHHHhCCccccCCC
Q 015867          379 PSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~~  398 (399)
                      |.+|||++|+|+||||++++
T Consensus       271 P~~R~t~~ell~H~ff~~~~  290 (298)
T d1gz8a_         271 PNKRISAKAALAHPFFQDVT  290 (298)
T ss_dssp             TTTSCCHHHHHTSGGGTTCC
T ss_pred             hhHCcCHHHHhCCHhhccCC
Confidence            99999999999999999875

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-57  Score=425.02  Aligned_cols=293  Identities=29%  Similarity=0.537  Sum_probs=236.8

Q ss_pred             CCceeeccCCc---cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCC
Q 015867           53 EGHYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGG  126 (399)
Q Consensus        53 ~~~~~~~~~~~---~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~  126 (399)
                      +|.+....+..   +.++|++++.||+|+||+||+|.+..+|+.||||+++..   ......+.+|+++++.+.      
T Consensus         2 ~~~~~~~~~~~~~~~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~------   75 (346)
T d1cm8a_           2 SGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR------   75 (346)
T ss_dssp             CSBCCEECSSSEECCBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCC------
T ss_pred             CCcEEEeccCceeecCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcC------
Confidence            45555566665   788999999999999999999999999999999999742   233456778999998885      


Q ss_pred             CcceeeeceeeccCC------eEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          127 SSHCVQIRNWFDYRN------HICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       127 ~~~iv~~~~~~~~~~------~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      ||||++++++|...+      .+|+||||++.+|..+++..   .+++..++.++.||+.||+|||++|||||||||+||
T Consensus        76 hpniv~l~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~~IiHrDiKp~NI  152 (346)
T d1cm8a_          76 HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHE---KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNL  152 (346)
T ss_dssp             BTTBCCCSEEECSCSSTTTCCCCEEEEECCSEEHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGE
T ss_pred             CCCeeEEEEEeccCccccccceEEEEEecccccHHHHHHhc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCcchh
Confidence            599999999987654      57999999998999888765   499999999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCC-CCCCcchhHHHHHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCI  279 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~i  279 (399)
                      |+                        +.++.+||+|||++..........+||+.|+|||++.+. .++.++|||||||+
T Consensus       153 L~------------------------~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvi  208 (346)
T d1cm8a_         153 AV------------------------NEDCELKILDFGLARQADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCI  208 (346)
T ss_dssp             EE------------------------CTTCCEEECCCTTCEECCSSCCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHH
T ss_pred             hc------------------------ccccccccccccceeccCCccccccccccccCHHHHcCCCCCCccchhhcchHH
Confidence            99                        457789999999999888777888999999999999875 57899999999999


Q ss_pred             HHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhh-hhhhhc
Q 015867          280 LVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRL-KNMVSL  358 (399)
Q Consensus       280 l~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~  358 (399)
                      +|+|++|++||.+.+..+.+..+....+.+|..++..........+                    ....... ......
T Consensus       209 l~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~  268 (346)
T d1cm8a_         209 MAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNY--------------------MKGLPELEKKDFAS  268 (346)
T ss_dssp             HHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHH--------------------HHHSCCCCCCCGGG
T ss_pred             HHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhh--------------------hccCCcccccchHH
Confidence            9999999999999999999999999999999887664432111100                    0000000 011112


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      ..+.+++++.|||.+||+.||.+|||++|+|+||||++++
T Consensus       269 ~~~~~s~~~~dli~~mL~~dP~~R~ta~eiL~Hp~f~~~~  308 (346)
T d1cm8a_         269 ILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFESLH  308 (346)
T ss_dssp             TCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred             hccCCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhCcCC
Confidence            3356788899999999999999999999999999999874

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-57  Score=420.45  Aligned_cols=274  Identities=28%  Similarity=0.457  Sum_probs=216.6

Q ss_pred             EEeeeccccceEEEEEEEccCCeEEEEEEEecchhh------hHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           70 ILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKY------RDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        70 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~------~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      .++.||+|+||+||+|++..+|+.||||+++.....      ...+.+|+.+++.+.      ||||+++++++.+++.+
T Consensus         2 ~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~------hpnIv~~~~~~~~~~~~   75 (299)
T d1ua2a_           2 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS------HPNIIGLLDAFGHKSNI   75 (299)
T ss_dssp             EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCC------CTTBCCEEEEECCTTCC
T ss_pred             cceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCC------CCCEeEEEeeeccCCce
Confidence            578999999999999999999999999998643221      235678999998885      59999999999999999


Q ss_pred             EEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          144 CIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       144 ~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      |+||||+ ++++..+.....  .+++..++.++.||+.||+|||++||+||||||+|||+                    
T Consensus        76 ~ivmE~~~~~~~~~~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli--------------------  133 (299)
T d1ua2a_          76 SLVFDFMETDLEVIIKDNSL--VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL--------------------  133 (299)
T ss_dssp             EEEEECCSEEHHHHHTTCCS--SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE--------------------
T ss_pred             eehhhhhcchHHhhhhhccc--CCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEe--------------------
Confidence            9999999 544444443333  69999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                          +.++.+||+|||++.....   .....+||+.|+|||++.+. .|+.++|||||||++|||++|.+||.+.+..++
T Consensus       134 ----~~~~~~KL~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~  209 (299)
T d1ua2a_         134 ----DENGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQ  209 (299)
T ss_dssp             ----CTTCCEEECCCGGGSTTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHH
T ss_pred             ----cCCCccccccCccccccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHH
Confidence                4567899999999876433   23456899999999998754 689999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +.+|.+..+.++...+....+.......    ..+|.                  .......+.+++++.+||.+||+.|
T Consensus       210 l~~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~------------------~~~~~~~~~~s~~~~dll~~~L~~d  267 (299)
T d1ua2a_         210 LTRIFETLGTPTEEQWPDMCSLPDYVTF----KSFPG------------------IPLHHIFSAAGDDLLDLIQGLFLFN  267 (299)
T ss_dssp             HHHHHHHHCCCCTTTSSSTTSSTTCCCC----CCCCC------------------CCHHHHCTTCCHHHHHHHHHHHCSS
T ss_pred             HHHHHHhcCCCChhhccchhccchhhhh----ccCCC------------------CChHHhcccCCHHHHHHHHHHccCC
Confidence            9999998887765432222111110000    00000                  0011122456888999999999999


Q ss_pred             CCCCCCHHHHhCCccccCC
Q 015867          379 PSERLTARQALNHPFFRNL  397 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~~  397 (399)
                      |.+|||++|+|+||||++.
T Consensus       268 P~~R~sa~e~L~Hp~f~~~  286 (299)
T d1ua2a_         268 PCARITATQALKMKYFSNR  286 (299)
T ss_dssp             TTTSCCHHHHHTSGGGTSS
T ss_pred             hhhCcCHHHHhCCHhhCCC
Confidence            9999999999999999975

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-58  Score=428.79  Aligned_cols=262  Identities=27%  Similarity=0.475  Sum_probs=211.7

Q ss_pred             ccCCCEEEEe-eeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--
Q 015867           63 NLTPRYKILS-KMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--  139 (399)
Q Consensus        63 ~~~~~y~~~~-~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--  139 (399)
                      .+.++|++++ .||+|+||+||+|++..+++.||||+++..    .....|+.++..+.     +||||++++++|.+  
T Consensus         8 ~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~----~~~~~E~~~~~~~~-----~hpnIv~l~~~~~~~~   78 (335)
T d2ozaa1           8 AIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC----PKARREVELHWRAS-----QCPHIVRIVDVYENLY   78 (335)
T ss_dssp             CGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECS----HHHHHHHHHHHHHT-----TSTTBCCEEEEEEEEE
T ss_pred             CcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECCc----HHHHHHHHHHHHhc-----CCCCCCeEEEEEeecc
Confidence            3456899886 599999999999999999999999999753    44567888766553     47999999999875  


Q ss_pred             --CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          140 --RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       140 --~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                        +..+|+||||| ||+|.+++.+.+...+++..++.|+.||+.||+|||++||+||||||+|||++..           
T Consensus        79 ~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~iiHRDiKp~NIll~~~-----------  147 (335)
T d2ozaa1          79 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSK-----------  147 (335)
T ss_dssp             TTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCS-----------
T ss_pred             cCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcCCccccccccccccccc-----------
Confidence              46799999999 8999999988665679999999999999999999999999999999999999643           


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                                +..+.+||+|||++....  ......+||+.|+|||++.+..|+.++|||||||++|+|++|++||.+.+
T Consensus       148 ----------~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~Pf~~~~  217 (335)
T d2ozaa1         148 ----------RPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNH  217 (335)
T ss_dssp             ----------STTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSCSCEETT
T ss_pred             ----------cccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCCCCCCCC
Confidence                      246789999999987533  33456789999999999999999999999999999999999999998766


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      ..+....+.....                    .....+|.                      .....+|+++.+||.+|
T Consensus       218 ~~~~~~~~~~~i~--------------------~~~~~~~~----------------------~~~~~~s~~~~~li~~~  255 (335)
T d2ozaa1         218 GLAISPGMKTRIR--------------------MGQYEFPN----------------------PEWSEVSEEVKMLIRNL  255 (335)
T ss_dssp             CC--------CCC--------------------SCSSSCCT----------------------THHHHSCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHh--------------------cCCCCCCC----------------------cccccCCHHHHHHHHHH
Confidence            5443333221100                    00111111                      12246788999999999


Q ss_pred             cccCCCCCCCHHHHhCCccccC
Q 015867          375 LRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |+.||.+|||+.|+++||||++
T Consensus       256 L~~dP~~R~s~~eil~hp~~~~  277 (335)
T d2ozaa1         256 LKTEPTQRMTITEFMNHPWIMQ  277 (335)
T ss_dssp             SCSSTTTSCCHHHHHHSHHHHT
T ss_pred             ccCChhHCcCHHHHHcCHHhhC
Confidence            9999999999999999999975

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-57  Score=415.03  Aligned_cols=249  Identities=29%  Similarity=0.481  Sum_probs=210.2

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-------hhHHHHHHHHHHHHhhhcCCCCCcceeeecee
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------YRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNW  136 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~  136 (399)
                      +.++|++.+.||+|+||+||+|++..+|+.||||+++....       ....+..|+.+++.+.+    .||||++++++
T Consensus         2 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~----~h~nIv~~~~~   77 (273)
T d1xwsa_           2 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSS----GFSGVIRLLDW   77 (273)
T ss_dssp             CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCS----SSCSBCCEEEE
T ss_pred             CCCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhcc----CCCCccEEEEE
Confidence            46789999999999999999999999999999999975321       12345679999999874    57999999999


Q ss_pred             eccCCeEEEEEccC-C-CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCc
Q 015867          137 FDYRNHICIVFEKL-G-PSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYK  214 (399)
Q Consensus       137 ~~~~~~~~lv~e~~-~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~  214 (399)
                      +.+.+..|+||||+ + +++.+++....  .+++..++.++.||+.||+|||++||+||||||+|||++.          
T Consensus        78 ~~~~~~~~lv~e~~~~~~~l~~~~~~~~--~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~----------  145 (273)
T d1xwsa_          78 FERPDSFVLILERPEPVQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL----------  145 (273)
T ss_dssp             EECSSEEEEEEECCSSEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET----------
T ss_pred             EeeCCeEEEEEEeccCcchHHHHHhccC--CCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec----------
Confidence            99999999999999 4 58888888765  5999999999999999999999999999999999999953          


Q ss_pred             CCCCCCCCcccCCCCCceEEeecCCcccCCC-CCcccccCCCccchhhhhCCCC-CCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          215 RSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-NHSSIVSTRHYRAPEVILGLGW-SYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       215 ~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-~~~~~~gt~~y~aPE~~~~~~~-~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                                   .++.+||+|||+|..... ...+.+||+.|+|||++.+..+ +.++|||||||++|+|++|+.||..
T Consensus       146 -------------~~~~vkl~DFG~a~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~  212 (273)
T d1xwsa_         146 -------------NRGELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEH  212 (273)
T ss_dssp             -------------TTTEEEECCCTTCEECCSSCBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCS
T ss_pred             -------------CCCeEEECccccceecccccccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCC
Confidence                         346799999999876433 3456789999999999987765 6779999999999999999999975


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+      .+....                                                  ...+..+|.++.+||.
T Consensus       213 ~~------~i~~~~--------------------------------------------------~~~~~~~s~~~~~li~  236 (273)
T d1xwsa_         213 DE------EIIRGQ--------------------------------------------------VFFRQRVSSECQHLIR  236 (273)
T ss_dssp             HH------HHHHCC--------------------------------------------------CCCSSCCCHHHHHHHH
T ss_pred             ch------HHhhcc--------------------------------------------------cCCCCCCCHHHHHHHH
Confidence            32      111110                                                  0112356888999999


Q ss_pred             HccccCCCCCCCHHHHhCCccccCC
Q 015867          373 GLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||+.||.+|||++|+|+||||+++
T Consensus       237 ~~L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         237 WCLALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             HHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             HHccCCHhHCcCHHHHhcCHhhCCC
Confidence            9999999999999999999999986

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=9.8e-56  Score=405.77  Aligned_cols=278  Identities=29%  Similarity=0.472  Sum_probs=219.2

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|+++++||+|+||+||+|++. +|+.||||+++...   .....+.+|+.+++.+.      ||||+++++++.+++.
T Consensus         2 ~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~------hpnIv~~~~~~~~~~~   74 (286)
T d1ob3a_           2 EKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELK------HSNIVKLYDVIHTKKR   74 (286)
T ss_dssp             CSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCC------CTTBCCEEEEEECSSC
T ss_pred             CCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCC------CCcEEeeeeecccCCc
Confidence            58999999999999999999885 78999999996532   22456777888887774      6999999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .+++||++++++...+.... ..+++..++.++.||+.||+|||++|||||||||+|||+                    
T Consensus        75 ~~i~~e~~~~~~~~~~~~~~-~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll--------------------  133 (286)
T d1ob3a_          75 LVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLI--------------------  133 (286)
T ss_dssp             EEEEEECCSEEHHHHHHTST-TCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE--------------------
T ss_pred             eeEEEEeehhhhHHHHHhhc-CCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeE--------------------
Confidence            99999999555555554433 269999999999999999999999999999999999999                    


Q ss_pred             cccCCCCCceEEeecCCcccCCC---CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCcHHH
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQ---NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHENLEH  298 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~---~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~  298 (399)
                          +.++.+||+|||.+.....   ......|++.|+|||.+.+. .++.++|||||||++|||++|+.||.+.+..+.
T Consensus       134 ----~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~  209 (286)
T d1ob3a_         134 ----NREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQ  209 (286)
T ss_dssp             ----CTTSCEEECCTTHHHHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH
T ss_pred             ----cCCCCEEecccccceecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHH
Confidence                4567899999998865332   23455799999999999765 579999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +.++....+.++...+..............      .               ..........+.++.++.|||.+||+.|
T Consensus       210 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~------~---------------~~~~~~~~~~~~~s~~~~dli~~~L~~d  268 (286)
T d1ob3a_         210 LMRIFRILGTPNSKNWPNVTELPKYDPNFT------V---------------YEPLPWESFLKGLDESGIDLLSKMLKLD  268 (286)
T ss_dssp             HHHHHHHHCCCCTTTSTTGGGSTTCCTTCC------C---------------CCCCCGGGTCCSCCHHHHHHHHHHTCSS
T ss_pred             HHHHHHhhCCCChhhccchhhhhhcccccc------c---------------ccCcchhhhcccCCHHHHHHHHHHccCC
Confidence            999988888776554433322111100000      0               0000112334567889999999999999


Q ss_pred             CCCCCCHHHHhCCccccC
Q 015867          379 PSERLTARQALNHPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~hp~f~~  396 (399)
                      |.+|||++|+|+||||++
T Consensus       269 P~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         269 PNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             TTTSCCHHHHHTSGGGGC
T ss_pred             hhHCcCHHHHhcCcccCc
Confidence            999999999999999985

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.6e-55  Score=412.33  Aligned_cols=279  Identities=28%  Similarity=0.493  Sum_probs=224.8

Q ss_pred             CEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc------C
Q 015867           67 RYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY------R  140 (399)
Q Consensus        67 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~------~  140 (399)
                      +|+.+++||+|+||+||+|++..+|+.||||++....   ....+|+++++.++      |+||++++++|..      .
T Consensus        21 ~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~---~~~~~Ei~il~~l~------h~niv~~~~~~~~~~~~~~~   91 (350)
T d1q5ka_          21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK---RFKNRELQIMRKLD------HCNIVRLRYFFYSSGEKKDE   91 (350)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS---SSCCHHHHHHHHCC------CTTBCCEEEEEEEC--CCSC
T ss_pred             CcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccc---hHHHHHHHHHHhcC------CCCCCcEEEEEEecCccCCc
Confidence            5999999999999999999999999999999997543   23346899998875      5999999998843      3


Q ss_pred             CeEEEEEccCCCCHHHHHHh--cCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          141 NHICIVFEKLGPSLFDFLKR--NKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       141 ~~~~lv~e~~~~~L~~~l~~--~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .++|||||||++++.+.+..  .....+++..++.++.||+.||+|||++||+||||||+|||++.              
T Consensus        92 ~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~~IiHrDiKp~NILl~~--------------  157 (350)
T d1q5ka_          92 VYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--------------  157 (350)
T ss_dssp             CEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECT--------------
T ss_pred             eEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhcCCcccCCCcceEEEec--------------
Confidence            46899999997666655532  23336999999999999999999999999999999999999943              


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCCc
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHEN  295 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~~  295 (399)
                               .+..+||+|||++....  ....+.+||+.|+|||.+.+. .|+.++|||||||++|||++|+.||...+.
T Consensus       158 ---------~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~  228 (350)
T d1q5ka_         158 ---------DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSG  228 (350)
T ss_dssp             ---------TTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSH
T ss_pred             ---------CCCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCH
Confidence                     23479999999987643  334567899999999998764 799999999999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHcc
Q 015867          296 LEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLL  375 (399)
Q Consensus       296 ~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L  375 (399)
                      .+.+..+.+..+.++...+...........       ++...              .........+..++++.+||.+||
T Consensus       229 ~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~--------------~~~~~~~~~~~~s~~~~dLl~~mL  287 (350)
T d1q5ka_         229 VDQLVEIIKVLGTPTREQIREMNPNYTEFK-------FPQIK--------------AHPWTKVFRPRTPPEAIALCSRLL  287 (350)
T ss_dssp             HHHHHHHHHHHCCCCHHHHHHHCC---CCC-------CCCCC--------------CCCGGGTSCTTSCHHHHHHHHHHS
T ss_pred             HHHHHHHHHHhCCChHHhhhhhccchhhcc-------ccccc--------------cCchhhhcccCCCHHHHHHHHHHc
Confidence            999999999999998888776543322111       11100              000111233567888999999999


Q ss_pred             ccCCCCCCCHHHHhCCccccCCC
Q 015867          376 RYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       376 ~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      +.||.+|||+.|+|+||||+++.
T Consensus       288 ~~dP~~R~ta~e~L~Hp~f~~~~  310 (350)
T d1q5ka_         288 EYTPTARLTPLEACAHSFFDELR  310 (350)
T ss_dssp             CSSGGGSCCHHHHHTSGGGGGGG
T ss_pred             cCChhHCcCHHHHhcCHhhcccc
Confidence            99999999999999999999863

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-54  Score=409.51  Aligned_cols=301  Identities=26%  Similarity=0.437  Sum_probs=227.4

Q ss_pred             ceeeccCCc---cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCc
Q 015867           55 HYVFNLGEN---LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSS  128 (399)
Q Consensus        55 ~~~~~~~~~---~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~  128 (399)
                      .+++..|+.   +.++|+++++||+|+||+||+|++..+|+.||||+++...   .....+..|+.+++.+.      ||
T Consensus         3 ~~~~~~~~~~f~i~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~------hp   76 (355)
T d2b1pa1           3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVN------HK   76 (355)
T ss_dssp             EEEEEETTEEEEEETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCC------CT
T ss_pred             CEEEEeCCcceeecCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcC------CC
Confidence            467778884   3478999999999999999999999999999999997532   33345678888888874      59


Q ss_pred             ceeeeceeecc------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE
Q 015867          129 HCVQIRNWFDY------RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL  202 (399)
Q Consensus       129 ~iv~~~~~~~~------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll  202 (399)
                      ||++++++|..      ..++|+|||||.+++.+.+..    .+++..++.++.||+.||+|||++||+||||||+|||+
T Consensus        77 nIv~~~~~f~~~~~~~~~~~~~iv~Ey~~~~l~~~~~~----~~~~~~i~~~~~qil~gl~~LH~~giiHrDlKP~Nil~  152 (355)
T d2b1pa1          77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQM----ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV  152 (355)
T ss_dssp             TBCCCSEEECSCCSTTTCCEEEEEEECCSEEHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             CeeEEEEEEecccccccCceeEEEEeccchHHHHhhhc----CCCHHHHHHHHHHHHHHHHHhhhcccccccCCcccccc
Confidence            99999999853      468999999997777766632    58999999999999999999999999999999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC--CCcccccCCCccchhhhhCCCCCCcchhHHHHHHH
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ--NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCIL  280 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il  280 (399)
                                              +.++.++++|||.+.....  .....+||+.|+|||++.+..+++++||||+||++
T Consensus       153 ------------------------~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l  208 (355)
T d2b1pa1         153 ------------------------KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIM  208 (355)
T ss_dssp             ------------------------CTTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHH
T ss_pred             ------------------------ccccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchH
Confidence                                    4567799999998765333  33556799999999999999999999999999999


Q ss_pred             HHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccc
Q 015867          281 VELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHV  360 (399)
Q Consensus       281 ~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  360 (399)
                      |+|++|++||.+.+......++......++...+..........+.......    ......    ..............
T Consensus       209 ~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~  280 (355)
T d2b1pa1         209 GEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYA----GLTFPK----LFPDSLFPADSEHN  280 (355)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCC----CCCHHH----HSCGGGSCCSSHHH
T ss_pred             HHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccc----cccccc----cccccccccccccc
Confidence            9999999999999999999999998888887766654333222222111000    000000    00001111122334


Q ss_pred             hhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          361 DRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       361 ~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ...+.++.+||++||+.||.+||||+|+|+||||+..
T Consensus       281 ~~~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         281 KLKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             HHHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred             ccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            5678899999999999999999999999999999863

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-54  Score=403.64  Aligned_cols=281  Identities=30%  Similarity=0.526  Sum_probs=219.7

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC-
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-  140 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-  140 (399)
                      ++++|++++.||+|+||+||+|++..+|+.||||+++...  .....+..|+++++.+.      ||||+++++++... 
T Consensus         6 i~~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~------hp~iv~~~~~~~~~~   79 (345)
T d1pmea_           6 VGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFR------HENIIGINDIIRAPT   79 (345)
T ss_dssp             CCTTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCC------CTTBCCCCEEECCSS
T ss_pred             cCCCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcC------CCCCCcEEEEEeecc
Confidence            3478999999999999999999999999999999997532  33456778999999986      59999999988654 


Q ss_pred             ----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          141 ----NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       141 ----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                          ..+|++|++++++|.+++....   +++..++.++.||+.||+|||++|||||||||+|||+              
T Consensus        80 ~~~~~~~~l~~~~~~g~L~~~l~~~~---l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl--------------  142 (345)
T d1pmea_          80 IEQMKDVYLVTHLMGADLYKLLKTQH---LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLL--------------  142 (345)
T ss_dssp             TTTCCCEEEEEECCCEEHHHHHHHCC---CCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE--------------
T ss_pred             ccccceEEEEEeecCCchhhhhhcCC---CCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEE--------------
Confidence                3467777666999999998754   9999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCC------CCcccccCCCccchhhhh-CCCCCCcchhHHHHHHHHHHHhCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQ------NHSSIVSTRHYRAPEVIL-GLGWSYPCDMWSVGCILVELCTGEAL  289 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~-~~~~~~~~DiwslG~il~ell~g~~P  289 (399)
                                +.++.+||+|||++.....      .....+||+.|+|||++. +..++.++||||+||++|+|++|+.|
T Consensus       143 ----------~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~p  212 (345)
T d1pmea_         143 ----------NTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI  212 (345)
T ss_dssp             ----------CTTCCEEECCCTTCEECCGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCS
T ss_pred             ----------CCCCCEEEcccCceeeccCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCC
Confidence                      4567899999999865322      234567999999999985 45789999999999999999999999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhh-hhhhhhhccchhhhhHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD-RLKNMVSLHVDRARSTLT  368 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~  368 (399)
                      |.+.+..+....+......++............                    ........ ..........+.++.++.
T Consensus       213 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~s~~~~  272 (345)
T d1pmea_         213 FPGKHYLDQLNHILGILGSPSQEDLNCIINLKA--------------------RNYLLSLPHKNKVPWNRLFPNADSKAL  272 (345)
T ss_dssp             CCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHH--------------------HHHHHTSCCCCCCCHHHHCTTSCHHHH
T ss_pred             CCCCCHHHHHHHHhhhccCCChhhhhhhhhhhh--------------------hcccccCCccCCCCHHHhCCCCCHHHH
Confidence            999998888888888877776554322110000                    00000000 000001122346678899


Q ss_pred             HHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          369 DLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       369 ~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      +||.+||+.||.+|||++|+|+||||++.
T Consensus       273 ~li~~~L~~dP~~R~ta~e~L~hpf~~~~  301 (345)
T d1pmea_         273 DLLDKMLTFNPHKRIEVEQALAHPYLEQY  301 (345)
T ss_dssp             HHHHHHSCSSTTTSCCHHHHHTSGGGTTT
T ss_pred             HHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            99999999999999999999999999975

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=6e-54  Score=401.49  Aligned_cols=285  Identities=24%  Similarity=0.466  Sum_probs=218.9

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--CCe
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--RNH  142 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--~~~  142 (399)
                      .++|+++++||+|+||+||+|++..+|+.||||+++...  ...+..|+++++.+.     +||||++++++|..  ...
T Consensus        34 ~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~Ei~il~~l~-----~hpnIv~~~~~~~~~~~~~  106 (328)
T d3bqca1          34 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KKKIKREIKILENLR-----GGPNIITLADIVKDPVSRT  106 (328)
T ss_dssp             GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSSC--HHHHHHHHHHHHHHT-----TSTTBCCEEEEEECTTTCS
T ss_pred             CcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHHH--HHHHHHHHHHHHhcc-----CCCCCcEEEEEEEecCCCc
Confidence            367999999999999999999999999999999987533  456788999999986     37999999999874  467


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      +++||||| +++|.++.     +.+++..++.++.||+.||+|||++|||||||||+||||+.                 
T Consensus       107 ~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~-----------------  164 (328)
T d3bqca1         107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH-----------------  164 (328)
T ss_dssp             EEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET-----------------
T ss_pred             eeEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC-----------------
Confidence            99999999 78886553     25999999999999999999999999999999999999953                 


Q ss_pred             CcccCCCCCceEEeecCCcccCC--CCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCC-CcHH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDN--QNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTH-ENLE  297 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~--~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~-~~~~  297 (399)
                            .+..+||+|||+|....  ......+||+.|+|||.+.+. .++.++||||+||++|+|++|..||... +..+
T Consensus       165 ------~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~  238 (328)
T d3bqca1         165 ------EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYD  238 (328)
T ss_dssp             ------TTTEEEECCGGGCEECCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHH
T ss_pred             ------CCCeeeecccccceeccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHH
Confidence                  24568999999987643  344667899999999998875 5899999999999999999999999764 4455


Q ss_pred             HHHHHHHHhCCCCHHHH-HHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          298 HLAMMERALGPLPEHMI-RRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       298 ~~~~i~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      ....+....+.+..... ..........+....... +.             ..............+++++.|||++||+
T Consensus       239 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------------~~~~~~~~~~~~~~~s~~~~dli~~mL~  304 (328)
T d3bqca1         239 QLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRH-SR-------------KRWERFVHSENQHLVSPEALDFLDKLLR  304 (328)
T ss_dssp             HHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCC-CC-------------CCGGGGCCTTTGGGCCHHHHHHHHHHSC
T ss_pred             HHHHHHHHHCCchhhhhhhhcccccCcccchhcccc-cc-------------cchhhcccccccccCCHHHHHHHHHHcc
Confidence            66667666654322221 111111111110000000 00             0000111223345678899999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCCC
Q 015867          377 YDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      .||.+|||++|+|+||||+++.
T Consensus       305 ~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         305 YDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             SSGGGSCCHHHHHTSGGGTTSC
T ss_pred             CChhHCcCHHHHhcCcccCCCC
Confidence            9999999999999999999874

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.2e-54  Score=396.01  Aligned_cols=247  Identities=18%  Similarity=0.275  Sum_probs=208.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .++|++.+.||+|+||+||+|.+..+++.||||+++........+.+|+++++.++      ||||+++++++.+.+..+
T Consensus        16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~E~~il~~l~------HpnIv~~~~~~~~~~~~~   89 (287)
T d1opja_          16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIK------HPNLVQLLGVCTREPPFY   89 (287)
T ss_dssp             GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCSCHHHHHHHHHHHHHCC------CTTBCCEEEEECSSSSCE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccchHHHHHHHHHHHHhCC------CCCEecCCccEeeCCeeE
Confidence            45799999999999999999999999999999999876666677889999999885      599999999999999999


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||| +|+|.+++.......+++..+..++.||+.||+|||++||+||||||+||||+                    
T Consensus        90 iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~~iiHrDlKp~NILl~--------------------  149 (287)
T d1opja_          90 IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG--------------------  149 (287)
T ss_dssp             EEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC--------------------
T ss_pred             EEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHCCcccCccccCeEEEC--------------------
Confidence            999999 89999999877666799999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCCC----cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC-CCcHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQNH----SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT-HENLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~-~~~~~~  298 (399)
                          .++.+||+|||+|.......    ....||+.|+|||++.+..|+.++|||||||++|||++|..||.. .+..+.
T Consensus       150 ----~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~  225 (287)
T d1opja_         150 ----ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQV  225 (287)
T ss_dssp             ----GGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH
T ss_pred             ----CCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCcchHHHH
Confidence                46679999999998754432    223578999999999999999999999999999999997666544 443333


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+....                                                 ....++.++.++.+||.+||+.|
T Consensus       226 ~~~i~~~~-------------------------------------------------~~~~~~~~~~~l~~li~~cl~~d  256 (287)
T d1opja_         226 YELLEKDY-------------------------------------------------RMERPEGCPEKVYELMRACWQWN  256 (287)
T ss_dssp             HHHHHTTC-------------------------------------------------CCCCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHhcCC-------------------------------------------------CCCCCccchHHHHHHHHHHcCCC
Confidence            33222110                                                 01122456788999999999999


Q ss_pred             CCCCCCHHHHhC
Q 015867          379 PSERLTARQALN  390 (399)
Q Consensus       379 P~~R~t~~ell~  390 (399)
                      |.+|||++|+++
T Consensus       257 P~~Rps~~ei~~  268 (287)
T d1opja_         257 PSDRPSFAEIHQ  268 (287)
T ss_dssp             GGGSCCHHHHHH
T ss_pred             HhHCcCHHHHHH
Confidence            999999999976

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-54  Score=399.49  Aligned_cols=283  Identities=28%  Similarity=0.463  Sum_probs=217.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc--
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY--  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~--  139 (399)
                      .++|+++++||+|+||+||+|++..+|+.||||++...   ......+.+|+++++.++      |+|++++++++..  
T Consensus         9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~------h~nii~~~~~~~~~~   82 (318)
T d3blha1           9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK------HENVVNLIEICRTKA   82 (318)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCC------CTTBCCEEEEEEC--
T ss_pred             cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhc------CCCccceEeeeeccc
Confidence            36899999999999999999999999999999998542   233456778999999885      4899999888754  


Q ss_pred             ------CCeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCC
Q 015867          140 ------RNHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGY  213 (399)
Q Consensus       140 ------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~  213 (399)
                            .+..|+||||+++.+........ ..+++..++.++.||+.||+|||++||+||||||+|||+           
T Consensus        83 ~~~~~~~~~~~iv~e~~~~~~~~~~~~~~-~~~~~~~~~~i~~qil~~l~~lH~~~ivHrDlKp~NILl-----------  150 (318)
T d3blha1          83 SPYNRCKGSIYLVFDFCEHDLAGLLSNVL-VKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI-----------  150 (318)
T ss_dssp             --------CEEEEEECCCEEHHHHHTCTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEE-----------
T ss_pred             ccccccCceEEEEEeccCCCccchhhhcc-cccccHHHHHHHHHHHHHHHHhccCCEEecCcCchheee-----------
Confidence                  45689999999666655554333 369999999999999999999999999999999999999           


Q ss_pred             cCCCCCCCCcccCCCCCceEEeecCCcccCCC-------CCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHh
Q 015867          214 KRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-------NHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCT  285 (399)
Q Consensus       214 ~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~  285 (399)
                                   +.++.+||+|||++.....       ...+.+||+.|+|||++.+. .|+.++|||||||++|+|++
T Consensus       151 -------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~el~~  217 (318)
T d3blha1         151 -------------TRDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT  217 (318)
T ss_dssp             -------------CTTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             -------------cCCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeeeHhh
Confidence                         4567899999999864322       22346799999999999865 68999999999999999999


Q ss_pred             CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhh
Q 015867          286 GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARS  365 (399)
Q Consensus       286 g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  365 (399)
                      |+.||.+.+..+....+....+.++...+..............     ..... .....            .......++
T Consensus       218 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-~~~~~------------~~~~~~~~~  279 (318)
T d3blha1         218 RSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLEL-----VKGQK-RKVKD------------RLKAYVRDP  279 (318)
T ss_dssp             SSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------C-----CSSCC-BCHHH------------HHHHHHCCH
T ss_pred             CCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcc-----ccccc-ccchh------------hhccccCCH
Confidence            9999999999999999999988887654333321111110000     00000 00000            001123466


Q ss_pred             HHHHHHHHccccCCCCCCCHHHHhCCccccC
Q 015867          366 TLTDLLHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       366 ~~~~li~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      ++.|||.+||+.||.+|||++|+|+||||+.
T Consensus       280 ~~~dLl~~mL~~dP~~R~sa~elL~Hpff~~  310 (318)
T d3blha1         280 YALDLIDKLLVLDPAQRIDSDDALNHDFFWS  310 (318)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHHHSGGGSS
T ss_pred             HHHHHHHHHCcCChhHCcCHHHHHcChhhcc
Confidence            7899999999999999999999999999985

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-54  Score=404.29  Aligned_cols=282  Identities=29%  Similarity=0.517  Sum_probs=223.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC-
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR-  140 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~-  140 (399)
                      .++|++++.||+|+||+||+|++..+|+.||||+++...   .....+.+|+++++.+.      |+|++++++++... 
T Consensus        17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~------h~~iv~~~~~~~~~~   90 (348)
T d2gfsa1          17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK------HENVIGLLDVFTPAR   90 (348)
T ss_dssp             ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCC------CTTBCCCSEEECSCS
T ss_pred             CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcC------CCCeeeEEEEEeecc
Confidence            468999999999999999999999999999999996532   23345778999998885      59999999988532 


Q ss_pred             -----CeEEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcC
Q 015867          141 -----NHICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKR  215 (399)
Q Consensus       141 -----~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~  215 (399)
                           ..++++++++|++|.+++...   .+++..++.++.||+.||+|||++||+||||||+|||+             
T Consensus        91 ~~~~~~~~~i~~~~~gg~L~~~~~~~---~l~e~~~~~i~~qil~aL~~LH~~giiHrDiKp~NILi-------------  154 (348)
T d2gfsa1          91 SLEEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAV-------------  154 (348)
T ss_dssp             STTTCCCCEEEEECCSEEHHHHHTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE-------------
T ss_pred             ccccCceEEEEEeecCCchhhhcccc---cccHHHHHHHHHHHHHHHHHHHhCCCcccccCCccccc-------------
Confidence                 345555554499999999654   49999999999999999999999999999999999999             


Q ss_pred             CCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCC-CCCCcchhHHHHHHHHHHHhCCCCCCCCC
Q 015867          216 SSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGL-GWSYPCDMWSVGCILVELCTGEALFQTHE  294 (399)
Q Consensus       216 ~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~  294 (399)
                                 +.++.+|++|||.+........+..||+.|+|||++.+. .++.++|||||||++|+|++|++||.+.+
T Consensus       155 -----------~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~  223 (348)
T d2gfsa1         155 -----------NEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTD  223 (348)
T ss_dssp             -----------CTTCCEEECCC----CCTGGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred             -----------cccccccccccchhcccCcccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCC
Confidence                       456789999999998877777788899999999998776 46899999999999999999999999999


Q ss_pred             cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHc
Q 015867          295 NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGL  374 (399)
Q Consensus       295 ~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~  374 (399)
                      .......+....+.++..+...........+.... ...+.                  .........++.++.|||.+|
T Consensus       224 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------------------~~~~~~~~~~s~~~~dli~~m  284 (348)
T d2gfsa1         224 HIDQLKLILRLVGTPGAELLKKISSESARNYIQSL-TQMPK------------------MNFANVFIGANPLAVDLLEKM  284 (348)
T ss_dssp             HHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTS-CCCCC------------------CCHHHHSTTCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhc-ccCCC------------------cchhhhcCCCCHHHHHHHHHH
Confidence            99999999999888887765433221111100000 00000                  000112245788899999999


Q ss_pred             cccCCCCCCCHHHHhCCccccCCC
Q 015867          375 LRYDPSERLTARQALNHPFFRNLN  398 (399)
Q Consensus       375 L~~dP~~R~t~~ell~hp~f~~~~  398 (399)
                      |+.||.+|||++|+|+||||++..
T Consensus       285 L~~dP~~R~ta~elL~Hp~f~~~~  308 (348)
T d2gfsa1         285 LVLDSDKRITAAQALAHAYFAQYH  308 (348)
T ss_dssp             SCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred             CcCChhhCcCHHHHhcCHhhCCCC
Confidence            999999999999999999999763

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=2.4e-54  Score=394.55  Aligned_cols=255  Identities=24%  Similarity=0.332  Sum_probs=204.4

Q ss_pred             CccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           62 ENLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        62 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ..+.++|++.+.||+|+||+||+|++..+|+.||||+++...    .....+..|+++++.+.      ||||+++++++
T Consensus         3 ~~l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~------hpniv~~~~~~   76 (277)
T d1o6ya_           3 SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALN------HPAIVAVYDTG   76 (277)
T ss_dssp             SEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCC------CTTBCCEEEEE
T ss_pred             cCccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcC------CCCCCccccee
Confidence            346788999999999999999999999999999999997532    22345667888877764      69999999988


Q ss_pred             ccCC----eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCC
Q 015867          138 DYRN----HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPG  212 (399)
Q Consensus       138 ~~~~----~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~  212 (399)
                      ...+    .+|+||||+ |++|.+++...+  .+++..++.++.||+.||+|||++|||||||||+|||++         
T Consensus        77 ~~~~~~~~~~~lvmE~~~g~~L~~~~~~~~--~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~---------  145 (277)
T d1o6ya_          77 EAETPAGPLPYIVMEYVDGVTLRDIVHTEG--PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---------  145 (277)
T ss_dssp             EEECSSSEEEEEEEECCCEEEHHHHHHHHC--SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---------
T ss_pred             eeccCCCceEEEEEECCCCCEehhhhcccC--CCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC---------
Confidence            7643    589999999 899999998876  599999999999999999999999999999999999994         


Q ss_pred             CcCCCCCCCCcccCCCCCceEEeecCCcccCCC------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhC
Q 015867          213 YKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG  286 (399)
Q Consensus       213 ~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g  286 (399)
                                     .++..+++|||.+.....      .....+||+.|+|||++.+..+++++|||||||++|+|+||
T Consensus       146 ---------------~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG  210 (277)
T d1o6ya_         146 ---------------ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTG  210 (277)
T ss_dssp             ---------------TTSCEEECCCTTCEECC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHS
T ss_pred             ---------------ccccceeehhhhhhhhccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhC
Confidence                           466789999998654221      23456899999999999999999999999999999999999


Q ss_pred             CCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhH
Q 015867          287 EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARST  366 (399)
Q Consensus       287 ~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (399)
                      ++||.+.+..+...++......++.                                              ...+.+|++
T Consensus       211 ~~Pf~~~~~~~~~~~~~~~~~~~~~----------------------------------------------~~~~~~s~~  244 (277)
T d1o6ya_         211 EPPFTGDSPVSVAYQHVREDPIPPS----------------------------------------------ARHEGLSAD  244 (277)
T ss_dssp             SCSCCCSSHHHHHHHHHHCCCCCGG----------------------------------------------GTSSSCCHH
T ss_pred             CCCCCCcCHHHHHHHHHhcCCCCCc----------------------------------------------hhccCCCHH
Confidence            9999988887776666543222111                                              122457888


Q ss_pred             HHHHHHHccccCCCCCC-CHHHHhCCcccc
Q 015867          367 LTDLLHGLLRYDPSERL-TARQALNHPFFR  395 (399)
Q Consensus       367 ~~~li~~~L~~dP~~R~-t~~ell~hp~f~  395 (399)
                      +.+||.+||+.||.+|| |+++ +.|+|++
T Consensus       245 l~~li~~~L~~dp~~R~~sa~~-l~~~l~r  273 (277)
T d1o6ya_         245 LDAVVLKALAKNPENRYQTAAE-MRADLVR  273 (277)
T ss_dssp             HHHHHHHHTCSSGGGSCSSHHH-HHHHHHH
T ss_pred             HHHHHHHHccCCHhHCHhHHHH-HHHHHHH
Confidence            99999999999999999 5555 4567654

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.8e-54  Score=388.19  Aligned_cols=245  Identities=23%  Similarity=0.371  Sum_probs=201.7

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.+.||+|+||+||+|++. +++.||||+++........+..|+++++.++      ||||+++++++...+..++
T Consensus         5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~E~~~l~~l~------HpnIv~~~g~~~~~~~~~l   77 (263)
T d1sm2a_           5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMSEEDFIEEAEVMMKLS------HPKLVQLYGVCLEQAPICL   77 (263)
T ss_dssp             SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSSCHHHHHHHHHHHHHCC------CTTBCCEEEEECSSSSCEE
T ss_pred             HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcCcHHHHHHHHHHHHhcC------CCCcccccceeccCCceEE
Confidence            46999999999999999999875 5678999999876666678889999999985      5999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +|+|.+++..... .+++..+..++.||+.||+|||+++|+||||||+|||+                      
T Consensus        78 v~E~~~~g~L~~~l~~~~~-~~~~~~~~~i~~qia~gl~~lH~~~iiHrDlKp~Nill----------------------  134 (263)
T d1sm2a_          78 VFEFMEHGCLSDYLRTQRG-LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLV----------------------  134 (263)
T ss_dssp             EEECCTTCBHHHHHHTTTT-CCCHHHHHHHHHHHHHHHHHHHHTTCCCTTCSGGGEEE----------------------
T ss_pred             EEEecCCCcHHHHhhcccc-CCCHHHHHHHHHHHHHHHHhhhccceeecccchhheee----------------------
Confidence            99999 9999999876543 68999999999999999999999999999999999999                      


Q ss_pred             cCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                        +.++.+||+|||++......    .....||+.|+|||++.+..|+.++|||||||++|||+| |.+||...+..+..
T Consensus       135 --~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~  212 (263)
T d1sm2a_         135 --GENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVV  212 (263)
T ss_dssp             --CGGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHH
T ss_pred             --cCCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHH
Confidence              45678999999998764322    234578999999999999999999999999999999999 67777777766666


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+......                                                 ..+..++.++.+||.+||+.||
T Consensus       213 ~~i~~~~~~-------------------------------------------------~~p~~~~~~l~~li~~cl~~~p  243 (263)
T d1sm2a_         213 EDISTGFRL-------------------------------------------------YKPRLASTHVYQIMNHCWKERP  243 (263)
T ss_dssp             HHHHHTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTCSSG
T ss_pred             HHHHhcCCC-------------------------------------------------CCccccCHHHHHHHHHHccCCH
Confidence            665443211                                                 1123457788999999999999


Q ss_pred             CCCCCHHHHhCC
Q 015867          380 SERLTARQALNH  391 (399)
Q Consensus       380 ~~R~t~~ell~h  391 (399)
                      .+|||++|+++|
T Consensus       244 ~~Rps~~~il~~  255 (263)
T d1sm2a_         244 EDRPAFSRLLRQ  255 (263)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999986

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-53  Score=391.82  Aligned_cols=279  Identities=30%  Similarity=0.477  Sum_probs=222.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      ++|++++.||+|+||+||+|++..+++.||||+++...   .....+.+|+.+++.++      |+||+++++++.+...
T Consensus         2 ~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~------h~niv~~~~~~~~~~~   75 (292)
T d1unla_           2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK------HKNIVRLHDVLHSDKK   75 (292)
T ss_dssp             CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCC------CTTBCCEEEEEECSSE
T ss_pred             CCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcC------cCCEEeeccccccccc
Confidence            58999999999999999999999999999999996532   23455667888877764      5999999999999999


Q ss_pred             EEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCC
Q 015867          143 ICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEM  221 (399)
Q Consensus       143 ~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~  221 (399)
                      .++||+++ +++|..++...+  .+++..++.++.|++.||+|||++|||||||||+|||+                   
T Consensus        76 ~~iv~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli-------------------  134 (292)
T d1unla_          76 LTLVFEFCDQDLKKYFDSCNG--DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLI-------------------  134 (292)
T ss_dssp             EEEEEECCSEEHHHHHHHTTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEE-------------------
T ss_pred             eeEEeeecccccccccccccc--ccchhHHHHHHHHHHHHHHHhhcCCEeeecccCccccc-------------------
Confidence            99999999 778887777655  69999999999999999999999999999999999999                   


Q ss_pred             CcccCCCCCceEEeecCCcccCCCC---CcccccCCCccchhhhhCCC-CCCcchhHHHHHHHHHHHhCCCCC-CCCCcH
Q 015867          222 PFRCLPKSSAIKLIDFGSTAFDNQN---HSSIVSTRHYRAPEVILGLG-WSYPCDMWSVGCILVELCTGEALF-QTHENL  296 (399)
Q Consensus       222 ~~~~~~~~~~~kl~Dfg~a~~~~~~---~~~~~gt~~y~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf-~~~~~~  296 (399)
                           +.++.+||+|||.+......   .....+++.|+|||++.+.. ++.++|||||||++|+|++|+.|| .+.+..
T Consensus       135 -----~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~  209 (292)
T d1unla_         135 -----NRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVD  209 (292)
T ss_dssp             -----CTTCCEEECCCTTCEECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHH
T ss_pred             -----ccCCceeeeecchhhcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHH
Confidence                 44677999999998764332   23456788999999998765 689999999999999999999885 566777


Q ss_pred             HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccc
Q 015867          297 EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLR  376 (399)
Q Consensus       297 ~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~  376 (399)
                      +....+....+.++...+...........       .+.              ...........+.+++.+.+||.+||+
T Consensus       210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~--------------~~~~~~~~~~~~~~s~~~~dll~~mL~  268 (292)
T d1unla_         210 DQLKRIFRLLGTPTEEQWPSMTKLPDYKP-------YPM--------------YPATTSLVNVVPKLNATGRDLLQNLLK  268 (292)
T ss_dssp             HHHHHHHHHHCCCCTTTCTTGGGSTTCCC-------CCC--------------CCTTCCCTTTSTTCCHHHHHHHHHHSC
T ss_pred             HHHHHHHhhcCCCChhhhhhhhhcccccc-------ccc--------------ccccchhhhccccCCHHHHHHHHHHcc
Confidence            77888888877766543332221111000       000              000111122335677889999999999


Q ss_pred             cCCCCCCCHHHHhCCccccCC
Q 015867          377 YDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       377 ~dP~~R~t~~ell~hp~f~~~  397 (399)
                      .||.+||||+|+|+||||++.
T Consensus       269 ~dP~~R~sa~e~L~Hp~f~~~  289 (292)
T d1unla_         269 CNPVQRISAEEALQHPYFSDF  289 (292)
T ss_dssp             SSGGGSCCHHHHTTSGGGSSC
T ss_pred             CChhHCcCHHHHhcChhhcCC
Confidence            999999999999999999875

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-54  Score=393.36  Aligned_cols=251  Identities=24%  Similarity=0.380  Sum_probs=210.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .++|++.+.||+|+||+||+|.+. ++..||||+++......+.+..|+++++.++      ||||+++++++.+ +..+
T Consensus        12 ~~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~~~g~~~~-~~~~   83 (272)
T d1qpca_          12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMSPDAFLAEANLMKQLQ------HQRLVRLYAVVTQ-EPIY   83 (272)
T ss_dssp             GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSSCHHHHHHHHHHHHHCC------CTTBCCEEEEECS-SSCE
T ss_pred             HHHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcCCHHHHHHHHHHHHhCC------CCCEeEEEeeecc-CCeE
Confidence            457999999999999999999875 6788999999876666678899999999986      5999999998754 5678


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +|+|.+++.......+++..+..|+.||+.||+|||++||+||||||+||||                     
T Consensus        84 iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~~ivHrDiKp~NIll---------------------  142 (272)
T d1qpca_          84 IITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILV---------------------  142 (272)
T ss_dssp             EEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEE---------------------
T ss_pred             EEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccchhheee---------------------
Confidence            999999 9999998765544459999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhC-CCCCCCCCcHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG-EALFQTHENLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~Pf~~~~~~~~  298 (399)
                         +.++.+||+|||+|......    .....||+.|+|||++.+..++.++|||||||++|||+|| .+||...+..+.
T Consensus       143 ---~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~  219 (272)
T d1qpca_         143 ---SDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEV  219 (272)
T ss_dssp             ---CTTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             ---ecccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHH
Confidence               45778999999999764332    2345789999999999999999999999999999999994 566666666665


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+......                                                 ..++.++.++.+||.+||+.|
T Consensus       220 ~~~i~~~~~~-------------------------------------------------~~p~~~~~~l~~li~~cl~~~  250 (272)
T d1qpca_         220 IQNLERGYRM-------------------------------------------------VRPDNCPEELYQLMRLCWKER  250 (272)
T ss_dssp             HHHHHTTCCC-------------------------------------------------CCCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHHhcCCC-------------------------------------------------CCcccChHHHHHHHHHHcCCC
Confidence            5555332111                                                 112356788999999999999


Q ss_pred             CCCCCCHHHHhC--CccccC
Q 015867          379 PSERLTARQALN--HPFFRN  396 (399)
Q Consensus       379 P~~R~t~~ell~--hp~f~~  396 (399)
                      |.+|||++|+++  |+||+.
T Consensus       251 P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         251 PEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             GGGSCCHHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHhhhhhhc
Confidence            999999999998  889875

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-53  Score=398.38  Aligned_cols=249  Identities=17%  Similarity=0.267  Sum_probs=205.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCC-----eEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQ-----ERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~-----~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||+|+||+||+|++..++     ..||+|.+...  ......+..|+.++..+.     +|||||++++++.
T Consensus        37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----~HpnIv~l~~~~~  111 (325)
T d1rjba_          37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLG-----SHENIVNLLGACT  111 (325)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEeccccCHHHHHHHHHHHHHHHHhc-----CCCcEeEEEEEEe
Confidence            57999999999999999999976554     36999998542  234456778999988874     3699999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY---------------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLK  196 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~---------------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dik  196 (399)
                      +.+.+|+||||| +|+|.+++.....                     ..+++..+..|+.||+.||+|||++||||||||
T Consensus       112 ~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlK  191 (325)
T d1rjba_         112 LSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLA  191 (325)
T ss_dssp             SSSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCS
T ss_pred             eCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCc
Confidence            999999999999 9999999976532                     248899999999999999999999999999999


Q ss_pred             CCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcc
Q 015867          197 PENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPC  271 (399)
Q Consensus       197 p~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~  271 (399)
                      |+|||++                        .++.+||+|||+|.......     .+..||+.|||||++.+..|+.++
T Consensus       192 p~Nill~------------------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~  247 (325)
T d1rjba_         192 ARNVLVT------------------------HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKS  247 (325)
T ss_dssp             GGGEEEE------------------------TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHH
T ss_pred             hhccccc------------------------cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCCCcce
Confidence            9999994                        56789999999987633322     345689999999999999999999


Q ss_pred             hhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhh
Q 015867          272 DMWSVGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLD  350 (399)
Q Consensus       272 DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~  350 (399)
                      |||||||++|||++ |.+||.+.+..+.+.++......+                                         
T Consensus       248 DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~-----------------------------------------  286 (325)
T d1rjba_         248 DVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKM-----------------------------------------  286 (325)
T ss_dssp             HHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCC-----------------------------------------
T ss_pred             eccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-----------------------------------------
Confidence            99999999999998 899999877666555544321111                                         


Q ss_pred             hhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          351 RLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                             ..+..++.++.+||.+||+.||.+|||++||++|
T Consensus       287 -------~~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         287 -------DQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             -------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -------CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence                   1123567889999999999999999999999875

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-53  Score=383.79  Aligned_cols=245  Identities=22%  Similarity=0.344  Sum_probs=211.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICI  145 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~l  145 (399)
                      ++|++.++||+|+||+||+|+.+ +++.||||+++......+.+.+|+.+++.++      ||||+++++++.+++.+++
T Consensus         4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~~~~~~~Ev~~~~~l~------HpnIv~~~g~~~~~~~~~i   76 (258)
T d1k2pa_           4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS------HEKLVQLYGVCTKQRPIFI   76 (258)
T ss_dssp             CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSCHHHHHHHHHHHHTCC------CTTBCCEEEEECCSSSEEE
T ss_pred             HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCCHHHHHHHHHHHHhcC------CCceeeEEEEEeeCCceEE
Confidence            46889999999999999999974 7888999999876666778888999988885      5999999999999999999


Q ss_pred             EEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCcc
Q 015867          146 VFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFR  224 (399)
Q Consensus       146 v~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~  224 (399)
                      ||||+ +|+|.+++..... .+++..+..++.||+.||+|||++||+||||||+|||+                      
T Consensus        77 v~Ey~~~g~l~~~~~~~~~-~~~~~~~~~i~~qi~~gl~~LH~~~iiH~dlk~~Nill----------------------  133 (258)
T d1k2pa_          77 ITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV----------------------  133 (258)
T ss_dssp             EEECCTTEEHHHHHHSGGG-CCCHHHHHHHHHHHHHHHHHHHHTTBCCSCCSGGGEEE----------------------
T ss_pred             EEEccCCCcHHHhhhcccc-CCcHHHHHHHHHHHHHHHHHHhhcCcccccccceeEEE----------------------
Confidence            99999 8999999766543 58999999999999999999999999999999999999                      


Q ss_pred             cCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHH
Q 015867          225 CLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHL  299 (399)
Q Consensus       225 ~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~  299 (399)
                        +.++.+||+|||++......    .....||+.|+|||++.+..++.++|||||||++|||+| |+.||.+.+..+..
T Consensus       134 --~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~  211 (258)
T d1k2pa_         134 --NDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETA  211 (258)
T ss_dssp             --CTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHH
T ss_pred             --cCCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHhcCCCCCCCCCHHHHH
Confidence              45678999999998753322    234568999999999999999999999999999999998 89999998887777


Q ss_pred             HHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCC
Q 015867          300 AMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDP  379 (399)
Q Consensus       300 ~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP  379 (399)
                      ..+.......                                                 .+..++.++.+||.+||+.||
T Consensus       212 ~~i~~~~~~~-------------------------------------------------~p~~~~~~l~~li~~cl~~dP  242 (258)
T d1k2pa_         212 EHIAQGLRLY-------------------------------------------------RPHLASEKVYTIMYSCWHEKA  242 (258)
T ss_dssp             HHHHTTCCCC-------------------------------------------------CCTTCCHHHHHHHHHTTCSSG
T ss_pred             HHHHhCCCCC-------------------------------------------------CcccccHHHHHHHHHHccCCH
Confidence            7665432111                                                 113456788999999999999


Q ss_pred             CCCCCHHHHhCC
Q 015867          380 SERLTARQALNH  391 (399)
Q Consensus       380 ~~R~t~~ell~h  391 (399)
                      .+|||++++++|
T Consensus       243 ~~RPt~~eil~~  254 (258)
T d1k2pa_         243 DERPTFKILLSN  254 (258)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hHCcCHHHHHHH
Confidence            999999999987

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-53  Score=394.30  Aligned_cols=256  Identities=26%  Similarity=0.440  Sum_probs=212.8

Q ss_pred             CCEEEEeeeccccceEEEEEEE---ccCCeEEEEEEEecch-----hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           66 PRYKILSKMGEGTFGRVLECWD---RQTQERVAIKVVRSIR-----KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~---~~~~~~vaiK~~~~~~-----~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      ++|++++.||+|+||+||+|++   ..+|+.||||+++...     .....+..|+++++.+.|     ||||+++++++
T Consensus        24 ~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h-----~pnIv~~~~~~   98 (322)
T d1vzoa_          24 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQ-----SPFLVTLHYAF   98 (322)
T ss_dssp             GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHT-----CTTBCCEEEEE
T ss_pred             hceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccC-----CCeEEEeeeee
Confidence            5799999999999999999987   3468999999985421     234567789999999985     57999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRS  216 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~  216 (399)
                      .+....++||||+ +++|.+++...+  .+++..+..++.||+.||+|||++|||||||||+|||+              
T Consensus        99 ~~~~~~~~v~e~~~~~~L~~~i~~~~--~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill--------------  162 (322)
T d1vzoa_          99 QTETKLHLILDYINGGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL--------------  162 (322)
T ss_dssp             EETTEEEEEECCCCSCBHHHHHHHHS--CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEE--------------
T ss_pred             ccCCceeeeeecccccHHHHHHHhcc--cccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceee--------------
Confidence            9999999999999 999999998877  58999999999999999999999999999999999999              


Q ss_pred             CCCCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCC--CCCCcchhHHHHHHHHHHHhCCCCC
Q 015867          217 SSGEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGL--GWSYPCDMWSVGCILVELCTGEALF  290 (399)
Q Consensus       217 ~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~--~~~~~~DiwslG~il~ell~g~~Pf  290 (399)
                                +.++.+||+|||++......    ..+..|++.|+|||.+.+.  .++.++|||||||+||+|++|..||
T Consensus       163 ----------~~~~~vkL~DFG~a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF  232 (322)
T d1vzoa_         163 ----------DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPF  232 (322)
T ss_dssp             ----------CTTSCEEESCSSEEEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTT
T ss_pred             ----------cCCCCEEEeeccchhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCC
Confidence                      45678999999998654322    2456799999999999765  4788999999999999999999999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .+.+..+....+.+....                                              .....+..++.++.+|
T Consensus       233 ~~~~~~~~~~~i~~~~~~----------------------------------------------~~~~~~~~~s~~~~~l  266 (322)
T d1vzoa_         233 TVDGEKNSQAEISRRILK----------------------------------------------SEPPYPQEMSALAKDL  266 (322)
T ss_dssp             SCTTSCCCHHHHHHHHHH----------------------------------------------CCCCCCTTSCHHHHHH
T ss_pred             CCCCHHHHHHHHHHhccc----------------------------------------------CCCCCcccCCHHHHHH
Confidence            876654444444332110                                              0111234678899999


Q ss_pred             HHHccccCCCCCC-----CHHHHhCCccccCCC
Q 015867          371 LHGLLRYDPSERL-----TARQALNHPFFRNLN  398 (399)
Q Consensus       371 i~~~L~~dP~~R~-----t~~ell~hp~f~~~~  398 (399)
                      |.+||+.||.+||     |++|+++||||++++
T Consensus       267 i~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i~  299 (322)
T d1vzoa_         267 IQRLLMKDPKKRLGCGPRDADEIKEHLFFQKIN  299 (322)
T ss_dssp             HHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTCC
T ss_pred             HHHHcccCHHHcCCCCcccHHHHHcCHhhcCCC
Confidence            9999999999999     589999999999875

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-53  Score=387.41  Aligned_cols=248  Identities=23%  Similarity=0.340  Sum_probs=198.7

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecc---hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSI---RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      .++|++.+.||+|+||+||+|+..   ..||||+++..   ......+..|+.+++.++      ||||+++++++. ++
T Consensus         7 ~~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~~~~~~~-~~   76 (276)
T d1uwha_           7 DGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR------HVNILLFMGYST-AP   76 (276)
T ss_dssp             TTCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCC------CTTBCCEEEEEC-SS
T ss_pred             cccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCC------CCCEeeeeEEEe-cc
Confidence            467999999999999999999753   35999998643   233456677888887764      699999999765 45


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      .+++||||| +|+|.+++...+. .+++..+..|+.||+.||+|||++|||||||||+|||++                 
T Consensus        77 ~~~lv~Ey~~~g~L~~~l~~~~~-~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~-----------------  138 (276)
T d1uwha_          77 QLAIVTQWCEGSSLYHHLHIIET-KFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH-----------------  138 (276)
T ss_dssp             SCEEEEECCCEEEHHHHHHTSCC-CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE-----------------
T ss_pred             EEEEEEecCCCCCHHHHHhhccC-CCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc-----------------
Confidence            689999999 8999999976543 599999999999999999999999999999999999994                 


Q ss_pred             CCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCC---CCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGL---GWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~---~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                             .++.+||+|||+|.....     ......||+.|||||++.+.   .|+.++|||||||++|||+||+.||.+
T Consensus       139 -------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~  211 (276)
T d1uwha_         139 -------EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSN  211 (276)
T ss_dssp             -------TTSSEEECCCCCSCC------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             -------CCCCEEEccccceeeccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCC
Confidence                   467899999999876432     22456899999999999743   589999999999999999999999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+....+..+.......|.                                            .......+++++.+||.
T Consensus       212 ~~~~~~~~~~~~~~~~~p~--------------------------------------------~~~~~~~~~~~l~~li~  247 (276)
T d1uwha_         212 INNRDQIIFMVGRGYLSPD--------------------------------------------LSKVRSNCPKAMKRLMA  247 (276)
T ss_dssp             CCCHHHHHHHHHHTSCCCC--------------------------------------------GGGSCTTCCHHHHHHHH
T ss_pred             CChHHHHHHHHhcCCCCCc--------------------------------------------chhccccchHHHHHHHH
Confidence            7776655544433221111                                            01123467888999999


Q ss_pred             HccccCCCCCCCHHHHhCC
Q 015867          373 GLLRYDPSERLTARQALNH  391 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~h  391 (399)
                      +||+.||.+|||++|+++|
T Consensus       248 ~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         248 ECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999876

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=4.2e-53  Score=389.69  Aligned_cols=247  Identities=23%  Similarity=0.320  Sum_probs=197.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCe---EEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQE---RVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~---~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .++|++.+.||+|+||+||+|++..+++   .||||.+...  ......+.+|+++++.++      |||||++++++.+
T Consensus        25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~l~g~~~~   98 (299)
T d1jpaa_          25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFD------HPNVIHLEGVVTK   98 (299)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCC------CTTBCCEEEEECS
T ss_pred             hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC------CCCCccEEEEEee
Confidence            3579999999999999999999876654   5889987542  233456778888887774      6999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..++||||| +|+|.+++..... .+++..+..++.||+.||+|||++|||||||||+||||                
T Consensus        99 ~~~~~iv~Ey~~~g~L~~~~~~~~~-~l~~~~~~~i~~qia~gl~yLH~~~iiHrDlKp~NILl----------------  161 (299)
T d1jpaa_          99 STPVMIITEFMENGSLDSFLRQNDG-QFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV----------------  161 (299)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHTTTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----------------
T ss_pred             CCEEEEEEEecCCCcceeeeccccC-CCCHHHHHHHHHHHHHHHHHHhhCCCccCccccceEEE----------------
Confidence            99999999999 9999998886543 59999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCCC--------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQNH--------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEAL  289 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~--------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~P  289 (399)
                              +.++.+||+|||++.......        ....||+.|||||++.+..++.++|||||||++|||+| |..|
T Consensus       162 --------~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~el~t~g~~P  233 (299)
T d1jpaa_         162 --------NSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP  233 (299)
T ss_dssp             --------CTTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred             --------CCCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHHHHHhCCCCC
Confidence                    457789999999987643221        12457899999999999999999999999999999998 8999


Q ss_pred             CCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          290 FQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       290 f~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      |.+.+..+....+......                                                 ..+..++.++.+
T Consensus       234 f~~~~~~~~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l~~  264 (299)
T d1jpaa_         234 YWDMTNQDVINAIEQDYRL-------------------------------------------------PPPMDCPSALHQ  264 (299)
T ss_dssp             TTTCCHHHHHHHHHTTCCC-------------------------------------------------CCCTTCCHHHHH
T ss_pred             CCCCCHHHHHHHHHcCCCC-------------------------------------------------CCCccchHHHHH
Confidence            9988877776666442211                                                 112356788999


Q ss_pred             HHHHccccCCCCCCCHHHHhCC
Q 015867          370 LLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~h  391 (399)
                      ||.+||+.||.+|||+.||+++
T Consensus       265 li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         265 LMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHHHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999988764

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-53  Score=388.68  Aligned_cols=245  Identities=22%  Similarity=0.355  Sum_probs=199.9

Q ss_pred             eeeccccceEEEEEEEc--cCCeEEEEEEEecch---hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEE
Q 015867           72 SKMGEGTFGRVLECWDR--QTQERVAIKVVRSIR---KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIV  146 (399)
Q Consensus        72 ~~lG~G~~g~V~~~~~~--~~~~~vaiK~~~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv  146 (399)
                      ++||+|+||+||+|.+.  .+++.||||+++...   ...+.+..|+++++.++      ||||+++++++.. +..+||
T Consensus        13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~------HpnIv~~~g~~~~-~~~~lv   85 (277)
T d1xbba_          13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD------NPYIVRMIGICEA-ESWMLV   85 (277)
T ss_dssp             EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCC------CTTBCCEEEEEES-SSEEEE
T ss_pred             CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCC------CCCCceEEEEecc-CCEEEE
Confidence            46999999999999754  456889999986422   23456788888888875      5999999999865 457899


Q ss_pred             EccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCccc
Q 015867          147 FEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPFRC  225 (399)
Q Consensus       147 ~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~~~  225 (399)
                      |||+ +|+|.+++.+..  .+++..+..|+.||+.||+|||++|||||||||+|||++                      
T Consensus        86 mE~~~~g~L~~~l~~~~--~l~~~~~~~i~~qi~~gl~ylH~~~iiHrDlKp~Nill~----------------------  141 (277)
T d1xbba_          86 MEMAELGPLNKYLQQNR--HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLV----------------------  141 (277)
T ss_dssp             EECCTTEEHHHHHHHCT--TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE----------------------
T ss_pred             EEcCCCCcHHHHHhhcc--CCCHHHHHHHHHHHHHHHhhHHhCCcccCCCcchhhccc----------------------
Confidence            9999 999999998866  599999999999999999999999999999999999995                      


Q ss_pred             CCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHH
Q 015867          226 LPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEH  298 (399)
Q Consensus       226 ~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~  298 (399)
                        .++.+||+|||++.......      ....||+.|+|||++.+..++.++|||||||++|||++ |+.||.+.+..+.
T Consensus       142 --~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~  219 (277)
T d1xbba_         142 --TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEV  219 (277)
T ss_dssp             --ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             --ccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHhhCCCCCCCCCCHHHH
Confidence              46679999999987543221      23468999999999999999999999999999999998 8999998877766


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      ...+.+...                       ..                          .+..++.++.+||.+||+.|
T Consensus       220 ~~~i~~~~~-----------------------~~--------------------------~p~~~~~~~~~li~~cl~~d  250 (277)
T d1xbba_         220 TAMLEKGER-----------------------MG--------------------------CPAGCPREMYDLMNLCWTYD  250 (277)
T ss_dssp             HHHHHTTCC-----------------------CC--------------------------CCTTCCHHHHHHHHHHTCSS
T ss_pred             HHHHHcCCC-----------------------CC--------------------------CCcccCHHHHHHHHHHcCCC
Confidence            665543211                       11                          12356788999999999999


Q ss_pred             CCCCCCHHHH---hCCccccCCC
Q 015867          379 PSERLTARQA---LNHPFFRNLN  398 (399)
Q Consensus       379 P~~R~t~~el---l~hp~f~~~~  398 (399)
                      |.+|||+++|   |+|+|++-++
T Consensus       251 p~~RPs~~~i~~~L~~~~~~~~~  273 (277)
T d1xbba_         251 VENRPGFAAVELRLRNYYYDVVN  273 (277)
T ss_dssp             TTTSCCHHHHHHHHHHHHHHHHH
T ss_pred             HhHCcCHHHHHHHhhCHHhhcCC
Confidence            9999999998   5777765444

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.9e-51  Score=389.82  Aligned_cols=316  Identities=29%  Similarity=0.496  Sum_probs=243.0

Q ss_pred             eeeccCCccC-CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCC-----CCcc
Q 015867           56 YVFNLGENLT-PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKG-----GSSH  129 (399)
Q Consensus        56 ~~~~~~~~~~-~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~-----~~~~  129 (399)
                      +++..|+.+. +||+++++||+|+||+||+|++..+|+.||||+++......+....|+++++.+.+....     +|+|
T Consensus         2 ~p~~~g~~~~~~rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~   81 (362)
T d1q8ya_           2 HPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANH   81 (362)
T ss_dssp             CCCCTTCEETTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTT
T ss_pred             CCCCCCCCccCCcEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCc
Confidence            3456688775 579999999999999999999999999999999987666667788899999999876543     5789


Q ss_pred             eeeeceeecc--CCeEEEEEccC--CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH-CCccccCCCCCcEEEee
Q 015867          130 CVQIRNWFDY--RNHICIVFEKL--GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD-LRLIHTDLKPENILLVS  204 (399)
Q Consensus       130 iv~~~~~~~~--~~~~~lv~e~~--~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~-~givH~Dikp~NIll~~  204 (399)
                      |+++++++..  ....+++|+++  +++............+++..++.++.||+.||+|||+ .||+||||||+|||++.
T Consensus        82 iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~  161 (362)
T d1q8ya_          82 ILKLLDHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEI  161 (362)
T ss_dssp             BCCCCEEEEEEETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEE
T ss_pred             eEEEEEEeeeccccceeeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeec
Confidence            9999988865  35666666665  5566666666666679999999999999999999998 89999999999999976


Q ss_pred             cccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 015867          205 SEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  284 (399)
                      ++..                  .....++++|||.+..........+||+.|+|||++.+..++.++|+||+||++++|+
T Consensus       162 ~~~~------------------~~~~~~kl~dfg~s~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~  223 (362)
T d1q8ya_         162 VDSP------------------ENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELI  223 (362)
T ss_dssp             EETT------------------TTEEEEEECCCTTCEETTBCCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHH
T ss_pred             cCcc------------------cccceeeEeecccccccccccccccccccccChhhccccCCCccccccchHHHHHHHH
Confidence            5421                  1234589999999987777777889999999999999999999999999999999999


Q ss_pred             hCCCCCCCCC------cHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhc
Q 015867          285 TGEALFQTHE------NLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSL  358 (399)
Q Consensus       285 ~g~~Pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  358 (399)
                      +|+.||...+      ..+.+..+....+.+|..++.........+........++...... ....       ......
T Consensus       224 ~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~  295 (362)
T d1q8ya_         224 TGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWP-LEDV-------LTEKYK  295 (362)
T ss_dssp             HSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCC-HHHH-------HHHTTC
T ss_pred             HCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccchhhhccccccCCc-hhhh-------cccccc
Confidence            9999997533      4566777888899999888766543322222111111222111110 0000       011123


Q ss_pred             cchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCC
Q 015867          359 HVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNL  397 (399)
Q Consensus       359 ~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~  397 (399)
                      ..+..+.++.|||.+||+.||.+|||++|+|+||||+++
T Consensus       296 ~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~  334 (362)
T d1q8ya_         296 FSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT  334 (362)
T ss_dssp             CCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred             cCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence            446678899999999999999999999999999999975

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-53  Score=385.27  Aligned_cols=249  Identities=24%  Similarity=0.318  Sum_probs=205.7

Q ss_pred             CCEEEEee-eccccceEEEEEEEcc--CCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccC
Q 015867           66 PRYKILSK-MGEGTFGRVLECWDRQ--TQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYR  140 (399)
Q Consensus        66 ~~y~~~~~-lG~G~~g~V~~~~~~~--~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~  140 (399)
                      ++|.+.+. ||+|+||+||+|.++.  ++..||||+++..  ......+.+|+++++.++      ||||+++++++.+ 
T Consensus         8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~------HpnIv~l~g~~~~-   80 (285)
T d1u59a_           8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLD------NPYIVRLIGVCQA-   80 (285)
T ss_dssp             GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCC------CTTBCCEEEEEES-
T ss_pred             cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCC------CCCEeeEeeeecc-
Confidence            46888884 9999999999997653  4568999999643  233466888999998885      5999999998865 


Q ss_pred             CeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCC
Q 015867          141 NHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSG  219 (399)
Q Consensus       141 ~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~  219 (399)
                      +.+|+||||| +|+|.+++...+. .+++..+..++.||+.||+|||++||+||||||+|||++.               
T Consensus        81 ~~~~lvmE~~~~g~L~~~l~~~~~-~l~~~~~~~i~~qi~~gL~ylH~~~iiHrDlKp~Nill~~---------------  144 (285)
T d1u59a_          81 EALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVN---------------  144 (285)
T ss_dssp             SSEEEEEECCTTEEHHHHHTTCTT-TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEE---------------
T ss_pred             CeEEEEEEeCCCCcHHHHhhcccc-CCCHHHHHHHHHHHHHHHHHHHhCCeecCcCchhheeecc---------------
Confidence            4689999999 8999999865432 6999999999999999999999999999999999999954               


Q ss_pred             CCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 015867          220 EMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT  292 (399)
Q Consensus       220 ~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~  292 (399)
                               ++.+||+|||++......      .....||+.|+|||++.+..++.++|||||||++|||+| |+.||.+
T Consensus       145 ---------~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~lt~G~~Pf~~  215 (285)
T d1u59a_         145 ---------RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK  215 (285)
T ss_dssp             ---------TTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ---------CCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHHhCCCCCCCC
Confidence                     567999999998764332      234568999999999999999999999999999999998 9999998


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....|......                                                 ..++.++.++.+||.
T Consensus       216 ~~~~~~~~~i~~~~~~-------------------------------------------------~~p~~~~~~l~~li~  246 (285)
T d1u59a_         216 MKGPEVMAFIEQGKRM-------------------------------------------------ECPPECPPELYALMS  246 (285)
T ss_dssp             CCTHHHHHHHHTTCCC-------------------------------------------------CCCTTCCHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCC-------------------------------------------------CCCCcCCHHHHHHHH
Confidence            8877776666432111                                                 112456788999999


Q ss_pred             HccccCCCCCCCHHHH---hCCcccc
Q 015867          373 GLLRYDPSERLTARQA---LNHPFFR  395 (399)
Q Consensus       373 ~~L~~dP~~R~t~~el---l~hp~f~  395 (399)
                      +||+.||.+|||+.++   |+|+|+.
T Consensus       247 ~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         247 DCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             HTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            9999999999999887   6778763

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-52  Score=383.14  Aligned_cols=253  Identities=27%  Similarity=0.352  Sum_probs=206.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      .++|++.+.||+|+||+||+|++..+ +.||||+++......+.+..|+.+++.++      |+|||++++++.+ +.++
T Consensus        16 ~~~~~i~~~iG~G~fg~Vy~~~~~~~-~~vAiK~l~~~~~~~~~~~~E~~~l~~l~------h~nIv~~~g~~~~-~~~~   87 (285)
T d1fmka3          16 RESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMSPEAFLQEAQVMKKLR------HEKLVQLYAVVSE-EPIY   87 (285)
T ss_dssp             GGGEEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTSSCHHHHHHHHHHHHHCC------CTTBCCEEEEECS-SSCE
T ss_pred             HHHEEEeeEEeeCCCeEEEEEEECCC-CEEEEEEECcccCCHHHHHHHHHHHHhcc------cCCEeEEEEEEec-CCeE
Confidence            35799999999999999999988655 56999999876666677889999999885      5999999999865 5578


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +|+|.+++.......+++..+..++.||+.||+|||++||+||||||+||||+                    
T Consensus        88 lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~ivH~DlKp~NIll~--------------------  147 (285)
T d1fmka3          88 IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG--------------------  147 (285)
T ss_dssp             EEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC--------------------
T ss_pred             EEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhheecccccceEEEEC--------------------
Confidence            999999 99999998765444699999999999999999999999999999999999994                    


Q ss_pred             ccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhC-CCCCCCCCcHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG-EALFQTHENLEH  298 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~Pf~~~~~~~~  298 (399)
                          .++.+||+|||++......    .....||+.|+|||++.+..++.++|||||||++|||++| .+||......+.
T Consensus       148 ----~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~  223 (285)
T d1fmka3         148 ----ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV  223 (285)
T ss_dssp             ----GGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHH
T ss_pred             ----CCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHH
Confidence                4667999999998754322    2345789999999999999999999999999999999995 555666666666


Q ss_pred             HHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccC
Q 015867          299 LAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYD  378 (399)
Q Consensus       299 ~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d  378 (399)
                      +..+......                                                 ..++.++.++.+||.+||+.|
T Consensus       224 ~~~i~~~~~~-------------------------------------------------~~~~~~~~~l~~li~~cl~~d  254 (285)
T d1fmka3         224 LDQVERGYRM-------------------------------------------------PCPPECPESLHDLMCQCWRKE  254 (285)
T ss_dssp             HHHHHTTCCC-------------------------------------------------CCCTTSCHHHHHHHHHHTCSS
T ss_pred             HHHHHhcCCC-------------------------------------------------CCCcccCHHHHHHHHHHcccC
Confidence            6555432110                                                 122456788999999999999


Q ss_pred             CCCCCCHHHHhC--CccccCCC
Q 015867          379 PSERLTARQALN--HPFFRNLN  398 (399)
Q Consensus       379 P~~R~t~~ell~--hp~f~~~~  398 (399)
                      |.+|||+++|++  ++||+...
T Consensus       255 P~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         255 PEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             GGGSCCHHHHHHHHHTTTSCSC
T ss_pred             HhHCcCHHHHHHHHhhhhcCCC
Confidence            999999999988  88997753

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-50  Score=371.00  Aligned_cols=245  Identities=20%  Similarity=0.272  Sum_probs=194.6

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCC----eEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQ----ERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~----~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      +.|++.+.||+|+||.||+|.+..++    ..||||+++..  ......+.+|+++++.++      |||||++++++.+
T Consensus         7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~------H~nIv~~~g~~~~   80 (283)
T d1mqba_           7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFS------HHNIIRLEGVISK   80 (283)
T ss_dssp             TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCC------CTTBCCEEEEECS
T ss_pred             HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcC------CCCEeeeeEEEec
Confidence            46999999999999999999876554    47999998643  233445778888888875      5999999999999


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      .+..++||||+ ++++.+++..... .+++..+..++.||+.||+|||+++|+||||||+||||                
T Consensus        81 ~~~~~~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~~i~~gl~~lH~~~iiHrDlKp~NILl----------------  143 (283)
T d1mqba_          81 YKPMMIITEYMENGALDKFLREKDG-EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV----------------  143 (283)
T ss_dssp             SSSEEEEEECCTTEEHHHHHHHTTT-CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE----------------
T ss_pred             CCceEEEEEecccCcchhhhhcccc-cccHHHHHHHHHHHHHhhhhccccccccCccccceEEE----------------
Confidence            99999999999 8899988876543 69999999999999999999999999999999999999                


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhC-CCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTG-EALFQ  291 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g-~~Pf~  291 (399)
                              +.++.+||+|||++......      .....||+.|+|||++.+..++.++|||||||++|||++| .+||.
T Consensus       144 --------~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el~t~~~~~~~  215 (283)
T d1mqba_         144 --------NSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYW  215 (283)
T ss_dssp             --------CTTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTT
T ss_pred             --------CCCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHHHhCCCCccc
Confidence                    45778999999998763222      1234689999999999999999999999999999999995 55555


Q ss_pred             CCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHH
Q 015867          292 THENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLL  371 (399)
Q Consensus       292 ~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li  371 (399)
                      ..+..+....+......                                                 ..+..++..+.+||
T Consensus       216 ~~~~~~~~~~i~~~~~~-------------------------------------------------~~~~~~~~~l~~li  246 (283)
T d1mqba_         216 ELSNHEVMKAINDGFRL-------------------------------------------------PTPMDCPSAIYQLM  246 (283)
T ss_dssp             TCCHHHHHHHHHTTCCC-------------------------------------------------CCCTTCBHHHHHHH
T ss_pred             cCCHHHHHHHHhccCCC-------------------------------------------------CCchhhHHHHHHHH
Confidence            55555554444322110                                                 11235677889999


Q ss_pred             HHccccCCCCCCCHHHHhC
Q 015867          372 HGLLRYDPSERLTARQALN  390 (399)
Q Consensus       372 ~~~L~~dP~~R~t~~ell~  390 (399)
                      .+||+.||.+|||+.||++
T Consensus       247 ~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         247 MQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HHHTCSSTTTSCCHHHHHH
T ss_pred             HHHCcCCHhHCcCHHHHHH
Confidence            9999999999999999876

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-51  Score=374.95  Aligned_cols=246  Identities=24%  Similarity=0.336  Sum_probs=196.0

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccC---CeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQT---QERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .++|++.+.||+|+||.||+|++..+   +..||||.++..  ......+..|+++++.++      ||||+++++++. 
T Consensus         6 ~~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~l~~~~~-   78 (273)
T d1mp8a_           6 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFD------HPHIVKLIGVIT-   78 (273)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCC------CTTBCCEEEEEC-
T ss_pred             HHHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEEe-
Confidence            35799999999999999999987654   456899988642  233456778888888774      699999999986 


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ++..|+||||+ +|+|.+++..... .+++..+..++.||+.||+|||++||+||||||+||+++.              
T Consensus        79 ~~~~~iv~E~~~~g~l~~~~~~~~~-~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDlKp~NIll~~--------------  143 (273)
T d1mp8a_          79 ENPVWIIMELCTLGELRSFLQVRKY-SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS--------------  143 (273)
T ss_dssp             SSSCEEEEECCTTEEHHHHHHHTTT-TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE--------------
T ss_pred             cCeEEEEEEeccCCcHHhhhhccCC-CCCHHHHHHHHHHHHHHhhhhcccCeeccccchhheeecC--------------
Confidence            46789999999 8999998776543 6999999999999999999999999999999999999954              


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTH  293 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~  293 (399)
                                ++.+||+|||++......    .....||+.|+|||++.+..|+.++|||||||++|||++ |.+||.+.
T Consensus       144 ----------~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt~g~~P~~~~  213 (273)
T d1mp8a_         144 ----------NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGV  213 (273)
T ss_dssp             ----------TTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred             ----------CCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHhcCCCCCCCC
Confidence                      567999999998763322    234568999999999999999999999999999999998 89999988


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      +..+....+......                                                 ..++.+|.++.+||.+
T Consensus       214 ~~~~~~~~i~~~~~~-------------------------------------------------~~~~~~~~~~~~li~~  244 (273)
T d1mp8a_         214 KNNDVIGRIENGERL-------------------------------------------------PMPPNCPPTLYSLMTK  244 (273)
T ss_dssp             CGGGHHHHHHTTCCC-------------------------------------------------CCCTTCCHHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCC-------------------------------------------------CCCCCCCHHHHHHHHH
Confidence            877776665432110                                                 1124567889999999


Q ss_pred             ccccCCCCCCCHHHHhCC
Q 015867          374 LLRYDPSERLTARQALNH  391 (399)
Q Consensus       374 ~L~~dP~~R~t~~ell~h  391 (399)
                      ||+.||.+|||+.||++|
T Consensus       245 cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         245 CWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             HTCSSGGGSCCHHHHHHH
T ss_pred             HcCCCHhHCcCHHHHHHH
Confidence            999999999999999875

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=6.4e-51  Score=375.93  Aligned_cols=262  Identities=23%  Similarity=0.301  Sum_probs=207.0

Q ss_pred             cCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           64 LTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        64 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      +.++|++.+.||+|+||.||+|++..+|+.||||++.... ....+..|+++++.+.+     |++|+.+..++.+.+..
T Consensus         5 vg~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~E~~i~~~l~~-----~~~i~~~~~~~~~~~~~   78 (299)
T d1ckia_           5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT-KHPQLHIESKIYKMMQG-----GVGIPTIRWCGAEGDYN   78 (299)
T ss_dssp             ETTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCT-TSCCHHHHHHHHHHSTT-----STTCCCEEEEEEETTEE
T ss_pred             ECCEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhc-cCHHHHHHHHHHHHccC-----CCcccEEEEEEecCCEE
Confidence            4468999999999999999999999999999999987543 33567789999998875     45677777888889999


Q ss_pred             EEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          144 CIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       144 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      ++||||++++|.+.+..... .+++..+..++.|++.||+|||++|||||||||+|||+...                  
T Consensus        79 ~ivme~~~~~l~~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~------------------  139 (299)
T d1ckia_          79 VMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLG------------------  139 (299)
T ss_dssp             EEEEECCCCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCG------------------
T ss_pred             EEEEEEcCCchhhhhhhccC-CCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhcccccc------------------
Confidence            99999998888887765443 69999999999999999999999999999999999998543                  


Q ss_pred             ccCCCCCceEEeecCCcccCCC----------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQ----------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                         +.+..++|+|||+|.....          .....+||+.|+|||++.+..++.++|||||||++|||++|..||...
T Consensus       140 ---~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~  216 (299)
T d1ckia_         140 ---KKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGL  216 (299)
T ss_dssp             ---GGTTCEEECCCSSCEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCC
T ss_pred             ---CCCceeeeeccCcceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCccccc
Confidence               2467799999999875322          123567999999999999999999999999999999999999999876


Q ss_pred             CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHH
Q 015867          294 ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHG  373 (399)
Q Consensus       294 ~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~  373 (399)
                      ...+....+......                                          ..........+.+|+++.+||.+
T Consensus       217 ~~~~~~~~~~~~~~~------------------------------------------~~~~~~~~~~~~~p~~~~~li~~  254 (299)
T d1ckia_         217 KAATKRQKYERISEK------------------------------------------KMSTPIEVLCKGYPSEFATYLNF  254 (299)
T ss_dssp             C-------HHHHHHH------------------------------------------HHHSCHHHHTTTSCHHHHHHHHH
T ss_pred             chHHHHHHHHHhhcc------------------------------------------cCCCChhHhccCCCHHHHHHHHH
Confidence            655444333221100                                          00000111224678889999999


Q ss_pred             ccccCCCCCCCHH---HHhCCcccc
Q 015867          374 LLRYDPSERLTAR---QALNHPFFR  395 (399)
Q Consensus       374 ~L~~dP~~R~t~~---ell~hp~f~  395 (399)
                      ||+.||.+||+++   ++|+|+|.+
T Consensus       255 cl~~~p~~RP~~~~i~~~l~~~~~~  279 (299)
T d1ckia_         255 CRSLRFDDKPDYSYLRQLFRNLFHR  279 (299)
T ss_dssp             HHHSCTTCCCCHHHHHHHHHHHHHH
T ss_pred             HccCChhHCcCHHHHHHHHHHHHHH
Confidence            9999999999987   457777654

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.2e-51  Score=376.49  Aligned_cols=249  Identities=20%  Similarity=0.289  Sum_probs=193.5

Q ss_pred             CCEEEEeeeccccceEEEEEEEcc-----CCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQ-----TQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||+|+||.||+|++..     +++.||||+++..  ......+..|..++..+.     +|+||+.+++++.
T Consensus        13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~-----~h~~iv~~~~~~~   87 (299)
T d1ywna1          13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG-----HHLNVVNLLGACT   87 (299)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhc-----CCCeEEEeeeeec
Confidence            579999999999999999998643     4578999998642  233455666777777765     3689999988876


Q ss_pred             c-CCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEE
Q 015867          139 Y-RNHICIVFEKL-GPSLFDFLKRNK--------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILL  202 (399)
Q Consensus       139 ~-~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll  202 (399)
                      . .+.+++||||| +|+|.+++....              ...+++..+..++.||+.||+|||++|||||||||+||||
T Consensus        88 ~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl  167 (299)
T d1ywna1          88 KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILL  167 (299)
T ss_dssp             STTSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEE
T ss_pred             cCCCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeE
Confidence            5 45789999999 999999997643              1248899999999999999999999999999999999999


Q ss_pred             eecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCCCCcchhHHHH
Q 015867          203 VSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVG  277 (399)
Q Consensus       203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG  277 (399)
                      +                        .++.+||+|||+|.....     .....+||+.|+|||++.+..++.++||||||
T Consensus       168 ~------------------------~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~G  223 (299)
T d1ywna1         168 S------------------------EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFG  223 (299)
T ss_dssp             C------------------------GGGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHH
T ss_pred             C------------------------CCCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehH
Confidence            4                        466799999999865322     22456799999999999999999999999999


Q ss_pred             HHHHHHHhC-CCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhh
Q 015867          278 CILVELCTG-EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMV  356 (399)
Q Consensus       278 ~il~ell~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~  356 (399)
                      |++|||++| .+||.+.+..+.+..+......+                                               
T Consensus       224 vil~ellt~~~~p~~~~~~~~~~~~~~~~~~~~-----------------------------------------------  256 (299)
T d1ywna1         224 VLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRM-----------------------------------------------  256 (299)
T ss_dssp             HHHHHHHTTSCCSSTTCCCSHHHHHHHHHTCCC-----------------------------------------------
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC-----------------------------------------------
Confidence            999999986 57888766544443332221110                                               


Q ss_pred             hccchhhhhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       357 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                       ..++.+++++.+||.+||+.||.+|||++|+++|
T Consensus       257 -~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         257 -RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             -CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence             1123567889999999999999999999999986

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.6e-51  Score=371.56  Aligned_cols=243  Identities=22%  Similarity=0.336  Sum_probs=195.3

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-CCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-RNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~~~~  144 (399)
                      ++|++.+.||+|+||.||+|.+  .|..||||+++.. .....+.+|+++++.++      ||||+++++++.+ .+.+|
T Consensus         7 ~~~~~~~~lG~G~fg~Vy~~~~--~~~~vAvK~i~~~-~~~~~~~~E~~~l~~l~------HpnIv~~~g~~~~~~~~~~   77 (262)
T d1byga_           7 KELKLLQTIGKGEFGDVMLGDY--RGNKVAVKCIKND-ATAQAFLAEASVMTQLR------HSNLVQLLGVIVEEKGGLY   77 (262)
T ss_dssp             GGEEEEEEEEECSSCEEEEEEE--TTEEEEEEECCCC-C--HHHHHTHHHHTTCC------CTTBCCEEEEECCC--CCE
T ss_pred             HHeEEeEEEecCCCeEEEEEEE--CCeEEEEEEECcH-HHHHHHHHHHHHHHhCC------CCCEeeEEEEEEecCCcEE
Confidence            4799999999999999999987  4778999999653 33466778888887764      6999999998854 56789


Q ss_pred             EEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCCc
Q 015867          145 IVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMPF  223 (399)
Q Consensus       145 lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~~  223 (399)
                      +||||+ +|+|.+++.......+++..+..++.||+.||+|||+.+|+||||||+|||+                     
T Consensus        78 lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~ivH~dlkp~Nil~---------------------  136 (262)
T d1byga_          78 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---------------------  136 (262)
T ss_dssp             EEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE---------------------
T ss_pred             EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCceeccccchHhhee---------------------
Confidence            999999 9999999976544458999999999999999999999999999999999999                     


Q ss_pred             ccCCCCCceEEeecCCcccCCCCCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCCCCcHHHHHHH
Q 015867          224 RCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQTHENLEHLAMM  302 (399)
Q Consensus       224 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~~~~~~~~~~i  302 (399)
                         +.++.+||+|||++...........+|..|+|||++.+..+++++|||||||++|||+| |++||...+..+....|
T Consensus       137 ---~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i  213 (262)
T d1byga_         137 ---SEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV  213 (262)
T ss_dssp             ---CTTSCEEECCCCC------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH
T ss_pred             ---cCCCCEeecccccceecCCCCccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH
Confidence               45778999999999877666677789999999999999999999999999999999998 79999887766665555


Q ss_pred             HHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHHHccccCCCCC
Q 015867          303 ERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSER  382 (399)
Q Consensus       303 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  382 (399)
                      .....                       .                          ..++.+++++.+||.+||..||.+|
T Consensus       214 ~~~~~-----------------------~--------------------------~~~~~~~~~~~~li~~cl~~dP~~R  244 (262)
T d1byga_         214 EKGYK-----------------------M--------------------------DAPDGCPPAVYEVMKNCWHLDAAMR  244 (262)
T ss_dssp             TTTCC-----------------------C--------------------------CCCTTCCHHHHHHHHHHTCSSGGGS
T ss_pred             HcCCC-----------------------C--------------------------CCCccCCHHHHHHHHHHcccCHhHC
Confidence            32110                       1                          1223567889999999999999999


Q ss_pred             CCHHHHhC
Q 015867          383 LTARQALN  390 (399)
Q Consensus       383 ~t~~ell~  390 (399)
                      ||+.++++
T Consensus       245 ps~~~l~~  252 (262)
T d1byga_         245 PSFLQLRE  252 (262)
T ss_dssp             CCHHHHHH
T ss_pred             cCHHHHHH
Confidence            99999987

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-50  Score=377.00  Aligned_cols=245  Identities=20%  Similarity=0.282  Sum_probs=198.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCe----EEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQE----RVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY  139 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~----~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~  139 (399)
                      .+|++++.||+|+||+||+|.+..+|+    .||+|.++..  ......+..|+++++.++      ||||+++++++.+
T Consensus         9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~l~g~~~~   82 (317)
T d1xkka_           9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD------NPHVCRLLGICLT   82 (317)
T ss_dssp             TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCC------CTTBCCEEEEEES
T ss_pred             HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCC------CCCEeeEEEEEec
Confidence            369999999999999999999887776    5788887542  234567888999999885      5999999999987


Q ss_pred             CCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCC
Q 015867          140 RNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSS  218 (399)
Q Consensus       140 ~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~  218 (399)
                      ++ .+++|+++ +++|.+++..... .+++..+..|+.||+.||+|||++|||||||||+|||++               
T Consensus        83 ~~-~~~v~e~~~~~~l~~~~~~~~~-~~~~~~~~~i~~qi~~gl~yLH~~~iiHrDlKp~NIll~---------------  145 (317)
T d1xkka_          83 ST-VQLITQLMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVK---------------  145 (317)
T ss_dssp             SS-EEEEEECCTTCBHHHHHHHTSS-SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---------------
T ss_pred             CC-eeEEEEeccCCccccccccccc-CCCHHHHHHHHHHHHHHHHHHHHcCcccCcchhhcceeC---------------
Confidence            55 55666777 9999998876543 699999999999999999999999999999999999995               


Q ss_pred             CCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCCCC
Q 015867          219 GEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALFQT  292 (399)
Q Consensus       219 ~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf~~  292 (399)
                               .++.+||+|||++......     .....||+.|+|||++.+..|+.++|||||||++|||+| |.+||.+
T Consensus       146 ---------~~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t~g~~p~~~  216 (317)
T d1xkka_         146 ---------TPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG  216 (317)
T ss_dssp             ---------ETTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred             ---------CCCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHHCCCCCCCC
Confidence                     4667999999998764322     233468999999999999999999999999999999998 8999988


Q ss_pred             CCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          293 HENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       293 ~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                      .+..+....+......                                                 ..++.++.++.+||.
T Consensus       217 ~~~~~~~~~i~~~~~~-------------------------------------------------~~p~~~~~~~~~li~  247 (317)
T d1xkka_         217 IPASEISSILEKGERL-------------------------------------------------PQPPICTIDVYMIMV  247 (317)
T ss_dssp             SCGGGHHHHHHHTCCC-------------------------------------------------CCCTTBCHHHHHHHH
T ss_pred             CCHHHHHHHHHcCCCC-------------------------------------------------CCCcccCHHHHHHHH
Confidence            7776665555442211                                                 112456788999999


Q ss_pred             HccccCCCCCCCHHHHhCC
Q 015867          373 GLLRYDPSERLTARQALNH  391 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~h  391 (399)
                      +||+.||.+|||+.|+++|
T Consensus       248 ~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         248 KCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HhCCCChhhCcCHHHHHHH
Confidence            9999999999999999987

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-50  Score=369.83  Aligned_cols=248  Identities=19%  Similarity=0.299  Sum_probs=200.5

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCC-------eEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeece
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQ-------ERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRN  135 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~-------~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~  135 (399)
                      .++|++.+.||+|+||.||+|+...++       ..||||+++...  .....+..|...+..+.     +||||+++++
T Consensus        12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~e~~~l~~~~-----~HpnIv~~~~   86 (299)
T d1fgka_          12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIG-----KHKNIINLLG   86 (299)
T ss_dssp             GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTTCCHHHHHHHHHHHHHHHHHC-----CCTTBCCEEE
T ss_pred             HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcccChHHHHHHHHHHHHHHHhc-----CCCeEEeccc
Confidence            358999999999999999999875544       479999986533  33456677777777774     4799999999


Q ss_pred             eeccCCeEEEEEccC-CCCHHHHHHhcC--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcE
Q 015867          136 WFDYRNHICIVFEKL-GPSLFDFLKRNK--------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENI  200 (399)
Q Consensus       136 ~~~~~~~~~lv~e~~-~~~L~~~l~~~~--------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NI  200 (399)
                      ++.+++..++||||+ +|+|.+++....              ...+++..+..++.||+.||+|||++|||||||||+||
T Consensus        87 ~~~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~Ni  166 (299)
T d1fgka_          87 ACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNV  166 (299)
T ss_dssp             EECSSSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGE
T ss_pred             ccccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccce
Confidence            999999999999999 999999997653              23589999999999999999999999999999999999


Q ss_pred             EEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-----CCcccccCCCccchhhhhCCCCCCcchhHH
Q 015867          201 LLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-----NHSSIVSTRHYRAPEVILGLGWSYPCDMWS  275 (399)
Q Consensus       201 ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~Diws  275 (399)
                      |+                        +.++.+||+|||++.....     ......||+.|+|||.+.+..|+.++||||
T Consensus       167 Ll------------------------~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~DiwS  222 (299)
T d1fgka_         167 LV------------------------TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS  222 (299)
T ss_dssp             EE------------------------CTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHHH
T ss_pred             ee------------------------cCCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhHH
Confidence            99                        4567899999999875322     224467899999999999999999999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhh
Q 015867          276 VGCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKN  354 (399)
Q Consensus       276 lG~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~  354 (399)
                      |||++|||++ |.+||.+.+..+....+.....                       .                       
T Consensus       223 ~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~-----------------------~-----------------------  256 (299)
T d1fgka_         223 FGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR-----------------------M-----------------------  256 (299)
T ss_dssp             HHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC-----------------------C-----------------------
T ss_pred             hHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCC-----------------------C-----------------------
Confidence            9999999998 7999988777665554433211                       1                       


Q ss_pred             hhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          355 MVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       355 ~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                         ..+..++.++.+||.+||+.||.+|||+.||++
T Consensus       257 ---~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         257 ---DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             ---CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ---CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence               112356788999999999999999999999986

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.8e-50  Score=372.93  Aligned_cols=254  Identities=18%  Similarity=0.283  Sum_probs=208.8

Q ss_pred             CCCEEEEeeeccccceEEEEEEEc-----cCCeEEEEEEEecc--hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDR-----QTQERVAIKVVRSI--RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~-----~~~~~vaiK~~~~~--~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|++++.||+|+||+||+|+..     .+++.||||+++..  ......+..|+++++.++      |+||+++++++
T Consensus        12 ~~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~------h~niv~~~~~~   85 (301)
T d1lufa_          12 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFD------NPNIVKLLGVC   85 (301)
T ss_dssp             GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCC------CTTBCCEEEEE
T ss_pred             HHHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcC------CCCcccceeee
Confidence            457999999999999999999864     35688999998643  233456788998888875      59999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhcC----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCccccC
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRNK----------------------YCPFPVDLVREFGRQLLESVAYMHDLRLIHTD  194 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~~----------------------~~~~~~~~~~~i~~qi~~~L~~lH~~givH~D  194 (399)
                      ...+..++||||+ +++|.+++....                      ...+++..+..|+.||+.||+|||+++|||||
T Consensus        86 ~~~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrD  165 (301)
T d1lufa_          86 AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRD  165 (301)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSC
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeE
Confidence            9999999999999 999999997532                      12488899999999999999999999999999


Q ss_pred             CCCCcEEEeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCC-----CCCcccccCCCccchhhhhCCCCCC
Q 015867          195 LKPENILLVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDN-----QNHSSIVSTRHYRAPEVILGLGWSY  269 (399)
Q Consensus       195 ikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~-----~~~~~~~gt~~y~aPE~~~~~~~~~  269 (399)
                      |||+||||+                        .++.+||+|||+|....     ...++..||+.|+|||++.+..|+.
T Consensus       166 lKp~NILld------------------------~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~  221 (301)
T d1lufa_         166 LATRNCLVG------------------------ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTT  221 (301)
T ss_dssp             CSGGGEEEC------------------------GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCH
T ss_pred             EcccceEEC------------------------CCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCCh
Confidence            999999994                        46779999999986421     1234567899999999999999999


Q ss_pred             cchhHHHHHHHHHHHhCC-CCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHh
Q 015867          270 PCDMWSVGCILVELCTGE-ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKK  348 (399)
Q Consensus       270 ~~DiwslG~il~ell~g~-~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~  348 (399)
                      ++|||||||++|||++|. +||.+.+..+....+.....+                                        
T Consensus       222 ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~~~~~~----------------------------------------  261 (301)
T d1lufa_         222 ESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNIL----------------------------------------  261 (301)
T ss_dssp             HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCC----------------------------------------
T ss_pred             hhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHHcCCCC----------------------------------------
Confidence            999999999999999985 789888887777666442211                                        


Q ss_pred             hhhhhhhhhccchhhhhHHHHHHHHccccCCCCCCCHHHHhCCccccCCCC
Q 015867          349 LDRLKNMVSLHVDRARSTLTDLLHGLLRYDPSERLTARQALNHPFFRNLNE  399 (399)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~hp~f~~~~e  399 (399)
                               ..+..++.++.+||.+||+.||.+|||+.||++  +|+++-|
T Consensus       262 ---------~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~--~L~~i~~  301 (301)
T d1lufa_         262 ---------ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR--ILQRMCE  301 (301)
T ss_dssp             ---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH--HHHHTTC
T ss_pred             ---------CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH--HHHHhcC
Confidence                     112356778999999999999999999999955  7776644

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.6e-49  Score=363.60  Aligned_cols=257  Identities=21%  Similarity=0.247  Sum_probs=208.1

Q ss_pred             ccCCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           63 NLTPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        63 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.++|++.+.||+|+||+||+|++..+|+.||||++.... ....+..|.++++.+.+     ++|++.+++++.....
T Consensus         2 vig~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~-~~~~~~~e~~~~~~l~~-----~~~i~~~~~~~~~~~~   75 (293)
T d1csna_           2 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS-DAPQLRDEYRTYKLLAG-----CTGIPNVYYFGQEGLH   75 (293)
T ss_dssp             EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT-TSCCHHHHHHHHHHTTT-----CTTCCCEEEEEEETTE
T ss_pred             CCCCceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEcccc-CcHHHHHHHHHHHHhcC-----CCCCCEEEEEeecCCc
Confidence            35678999999999999999999999999999999986532 33456778899988874     5789999999999999


Q ss_pred             EEEEEccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCCCC
Q 015867          143 ICIVFEKLGPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGEMP  222 (399)
Q Consensus       143 ~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~~~  222 (399)
                      .++||||++++|.+++...+. .++...+..++.|++.||+|||++||+||||||+|||++...                
T Consensus        76 ~~~vme~~~~~l~~~~~~~~~-~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~----------------  138 (293)
T d1csna_          76 NVLVIDLLGPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPN----------------  138 (293)
T ss_dssp             EEEEEECCCCBHHHHHHHTTT-CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSS----------------
T ss_pred             cEEEEEecCCCHHHHHHhhcc-chhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcc----------------
Confidence            999999999999999977553 699999999999999999999999999999999999996432                


Q ss_pred             cccCCCCCceEEeecCCcccCCC----------CCcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCC
Q 015867          223 FRCLPKSSAIKLIDFGSTAFDNQ----------NHSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQT  292 (399)
Q Consensus       223 ~~~~~~~~~~kl~Dfg~a~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~  292 (399)
                         ....+.+||+|||+|.....          .....+||+.|||||++.+..++.++|||||||++|||++|..||.+
T Consensus       139 ---~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~  215 (293)
T d1csna_         139 ---SKNANMIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQG  215 (293)
T ss_dssp             ---STTTTCEEECCCTTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred             ---cccCCceEEcccceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCC
Confidence               12467799999999865321          23456899999999999999999999999999999999999999976


Q ss_pred             CCcH---HHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHH
Q 015867          293 HENL---EHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTD  369 (399)
Q Consensus       293 ~~~~---~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (399)
                      ....   +...++.......+.                                             ....+.+++++.+
T Consensus       216 ~~~~~~~~~~~~i~~~~~~~~~---------------------------------------------~~l~~~~p~~l~~  250 (293)
T d1csna_         216 LKAATNKQKYERIGEKKQSTPL---------------------------------------------RELCAGFPEEFYK  250 (293)
T ss_dssp             CCSCCHHHHHHHHHHHHHHSCH---------------------------------------------HHHTTTSCHHHHH
T ss_pred             ccchhHHHHHHHHHhccCCCCh---------------------------------------------HHhcCCCCHHHHH
Confidence            4432   223333222111110                                             0112456788999


Q ss_pred             HHHHccccCCCCCCCHHHHhC
Q 015867          370 LLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       370 li~~~L~~dP~~R~t~~ell~  390 (399)
                      ++..|+..+|.+||+++.+.+
T Consensus       251 ii~~~~~~~~~~rP~y~~l~~  271 (293)
T d1csna_         251 YMHYARNLAFDATPDYDYLQG  271 (293)
T ss_dssp             HHHHHHHCCTTCCCCHHHHHH
T ss_pred             HHHHHhcCCcccCcCHHHHHH
Confidence            999999999999999876643

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.4e-50  Score=372.31  Aligned_cols=248  Identities=21%  Similarity=0.284  Sum_probs=202.1

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeE--EEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQER--VAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN  141 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~--vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~  141 (399)
                      ++|++.+.||+|+||.||+|++..+|..  ||||.++...  .....+..|++++..+.     +||||+++++++.+.+
T Consensus        10 ~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~-----~HpnIv~~~~~~~~~~   84 (309)
T d1fvra_          10 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG-----HHPNIINLLGACEHRG   84 (309)
T ss_dssp             GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCC-----CCTTBCCEEEEEEETT
T ss_pred             HHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhcc-----CCCCEeeEEEEEecCC
Confidence            5799999999999999999999888764  6777775322  23446778888888764     3799999999999999


Q ss_pred             eEEEEEccC-CCCHHHHHHhc--------------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecc
Q 015867          142 HICIVFEKL-GPSLFDFLKRN--------------KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSE  206 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~--------------~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~  206 (399)
                      .+++||||+ +|+|.+++...              ....+++..+..++.||+.||.|||++||+||||||+|||++   
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~---  161 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---  161 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEc---
Confidence            999999999 99999999754              124699999999999999999999999999999999999994   


Q ss_pred             cccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC--CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHH
Q 015867          207 FIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN--HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELC  284 (399)
Q Consensus       207 ~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell  284 (399)
                                           .++.+||+|||++......  .....||..|+|||.+.+..++.++|||||||++|||+
T Consensus       162 ---------------------~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell  220 (309)
T d1fvra_         162 ---------------------ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIV  220 (309)
T ss_dssp             ---------------------GGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             ---------------------CCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHH
Confidence                                 4667999999998754332  23456899999999999999999999999999999999


Q ss_pred             hCC-CCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhh
Q 015867          285 TGE-ALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRA  363 (399)
Q Consensus       285 ~g~-~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  363 (399)
                      +|. +||.+.+..+....+.+...                       .                          ..+..+
T Consensus       221 ~~~~~p~~~~~~~~~~~~i~~~~~-----------------------~--------------------------~~~~~~  251 (309)
T d1fvra_         221 SLGGTPYCGMTCAELYEKLPQGYR-----------------------L--------------------------EKPLNC  251 (309)
T ss_dssp             TTSCCTTTTCCHHHHHHHGGGTCC-----------------------C--------------------------CCCTTB
T ss_pred             hcCCCCCCCCCHHHHHHHHHhcCC-----------------------C--------------------------CCCccC
Confidence            964 67887776666554432110                       1                          112456


Q ss_pred             hhHHHHHHHHccccCCCCCCCHHHHhCC
Q 015867          364 RSTLTDLLHGLLRYDPSERLTARQALNH  391 (399)
Q Consensus       364 ~~~~~~li~~~L~~dP~~R~t~~ell~h  391 (399)
                      ++++.+||.+||+.||.+|||++||++|
T Consensus       252 ~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         252 DDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            7889999999999999999999999986

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-50  Score=364.79  Aligned_cols=249  Identities=22%  Similarity=0.302  Sum_probs=196.0

Q ss_pred             CCEEEEeeeccccceEEEEEEEccC---CeEEEEEEEecc----hhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQT---QERVAIKVVRSI----RKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~---~~~vaiK~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++++.||+|+||.||+|+...+   ...||||++...    ....+.+..|+.+++.++      ||||+++++++.
T Consensus         8 ~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~------H~nIv~~~g~~~   81 (273)
T d1u46a_           8 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD------HRNLIRLYGVVL   81 (273)
T ss_dssp             GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCC------CTTBCCEEEEEC
T ss_pred             HHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCC------CCCEEEEEEEEe
Confidence            5799999999999999999986433   346899998642    233456788998888885      599999999997


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCC
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSS  217 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~  217 (399)
                      + +..++||||+ +++|.+++..... .+++..+..++.||+.||.|||++||+||||||+|||++.             
T Consensus        82 ~-~~~~lv~e~~~~~~l~~~~~~~~~-~l~~~~~~~~~~qi~~gl~ylH~~~iiHrDikp~NIll~~-------------  146 (273)
T d1u46a_          82 T-PPMKMVTELAPLGSLLDRLRKHQG-HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT-------------  146 (273)
T ss_dssp             S-SSCEEEEECCTTCBHHHHHHHHGG-GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE-------------
T ss_pred             e-cchheeeeeecCcchhhhhhcccC-CCCHHHHHHHHHHHHHHHHHhhhCCEeeeeecHHHhcccc-------------
Confidence            6 4678999999 8999988765432 5999999999999999999999999999999999999954             


Q ss_pred             CCCCCcccCCCCCceEEeecCCcccCCCCC------cccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHh-CCCCC
Q 015867          218 SGEMPFRCLPKSSAIKLIDFGSTAFDNQNH------SSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCT-GEALF  290 (399)
Q Consensus       218 ~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~-g~~Pf  290 (399)
                                 ++.+||+|||++.......      ....||..|+|||++.+..++.++|||||||++|||+| |..||
T Consensus       147 -----------~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~emlt~G~~Pf  215 (273)
T d1u46a_         147 -----------RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPW  215 (273)
T ss_dssp             -----------TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred             -----------ccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHHHhCCCCCC
Confidence                       5679999999987643322      23457889999999999999999999999999999998 89999


Q ss_pred             CCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHH
Q 015867          291 QTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDL  370 (399)
Q Consensus       291 ~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  370 (399)
                      .+.+..+....+.+....+                                                ..++.++..+.+|
T Consensus       216 ~~~~~~~~~~~i~~~~~~~------------------------------------------------~~~~~~~~~l~~l  247 (273)
T d1u46a_         216 IGLNGSQILHKIDKEGERL------------------------------------------------PRPEDCPQDIYNV  247 (273)
T ss_dssp             TTCCHHHHHHHHHTSCCCC------------------------------------------------CCCTTCCHHHHHH
T ss_pred             CCcCHHHHHHHHHhCCCCC------------------------------------------------CCcccccHHHHHH
Confidence            9988888777664421111                                                1124567889999


Q ss_pred             HHHccccCCCCCCCHHHHhCCccccC
Q 015867          371 LHGLLRYDPSERLTARQALNHPFFRN  396 (399)
Q Consensus       371 i~~~L~~dP~~R~t~~ell~hp~f~~  396 (399)
                      |.+||+.||.+|||+.||++  +|++
T Consensus       248 i~~cl~~dp~~RPt~~ei~~--~L~~  271 (273)
T d1u46a_         248 MVQCWAHKPEDRPTFVALRD--FLLE  271 (273)
T ss_dssp             HHHHTCSSGGGSCCHHHHHH--HHHH
T ss_pred             HHHHcCCChhHCcCHHHHHH--HHHh
Confidence            99999999999999999964  5543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-49  Score=364.33  Aligned_cols=248  Identities=24%  Similarity=0.354  Sum_probs=206.3

Q ss_pred             CCEEEEeeeccccceEEEEEEE-----ccCCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeec
Q 015867           66 PRYKILSKMGEGTFGRVLECWD-----RQTQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFD  138 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~-----~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~  138 (399)
                      ++|++.+.||+|+||.||+|+.     ..+++.||||+++...  .....+..|+.++..+.     +||||+++++++.
T Consensus        23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~~~~~l~-----~HpnIv~~~g~~~   97 (311)
T d1t46a_          23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLG-----NHMNIVNLLGACT   97 (311)
T ss_dssp             GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHC-----CCTTBCCEEEEEC
T ss_pred             HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECcccCHHHHHHHHHHHHHHHhcc-----CCCCEEEEEEEEe
Confidence            5899999999999999999985     3467899999997532  34456778888988884     4799999999999


Q ss_pred             cCCeEEEEEccC-CCCHHHHHHhcCC----------------CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEE
Q 015867          139 YRNHICIVFEKL-GPSLFDFLKRNKY----------------CPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENIL  201 (399)
Q Consensus       139 ~~~~~~lv~e~~-~~~L~~~l~~~~~----------------~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIl  201 (399)
                      +.+..++||||| +++|.+++.....                ..+++..+..++.||+.||+|||++|||||||||+|||
T Consensus        98 ~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl  177 (311)
T d1t46a_          98 IGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNIL  177 (311)
T ss_dssp             SSSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEE
T ss_pred             eCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCeeeccccccccc
Confidence            999999999999 9999999976432                25889999999999999999999999999999999999


Q ss_pred             EeecccccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCC-----cccccCCCccchhhhhCCCCCCcchhHHH
Q 015867          202 LVSSEFIKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNH-----SSIVSTRHYRAPEVILGLGWSYPCDMWSV  276 (399)
Q Consensus       202 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~-----~~~~gt~~y~aPE~~~~~~~~~~~Diwsl  276 (399)
                      ++                        .++.++++|||.+.......     ...+||+.|+|||++.+..++.++|||||
T Consensus       178 ~~------------------------~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DIwS~  233 (311)
T d1t46a_         178 LT------------------------HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSY  233 (311)
T ss_dssp             EE------------------------TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred             cc------------------------ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCcccccch
Confidence            94                        46789999999987644322     34578999999999999999999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhh
Q 015867          277 GCILVELCT-GEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNM  355 (399)
Q Consensus       277 G~il~ell~-g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~  355 (399)
                      ||++|||+| |.+||.+.+..+.+.++......+                                              
T Consensus       234 G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~----------------------------------------------  267 (311)
T d1t46a_         234 GIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRM----------------------------------------------  267 (311)
T ss_dssp             HHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCC----------------------------------------------
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCC----------------------------------------------
Confidence            999999998 777787766666655554321111                                              


Q ss_pred             hhccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          356 VSLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       356 ~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                        ..+..++.++.+||.+||+.||.+|||++||++
T Consensus       268 --~~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         268 --LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             --CCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence              112346778999999999999999999999985

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-49  Score=364.01  Aligned_cols=254  Identities=21%  Similarity=0.330  Sum_probs=209.1

Q ss_pred             CCCEEEEeeeccccceEEEEEEEcc-----CCeEEEEEEEecch--hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceee
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQ-----TQERVAIKVVRSIR--KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWF  137 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~-----~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~  137 (399)
                      .++|++.+.||+|+||+||+|.+..     ++..||||+++...  .....+..|+++++.+      +||||+++++.+
T Consensus        19 ~~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l------~h~nIv~~~~~~   92 (308)
T d1p4oa_          19 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEF------NCHHVVRLLGVV   92 (308)
T ss_dssp             GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGC------CCTTBCCEEEEE
T ss_pred             HHHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHc------CCCCEeeeeeEE
Confidence            4689999999999999999998752     45789999997532  2233456677777666      469999999999


Q ss_pred             ccCCeEEEEEccC-CCCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccc
Q 015867          138 DYRNHICIVFEKL-GPSLFDFLKRN--------KYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFI  208 (399)
Q Consensus       138 ~~~~~~~lv~e~~-~~~L~~~l~~~--------~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~  208 (399)
                      ..++..++||||+ +|+|.+++...        ....+++..+..++.|++.||.|||+++|+||||||+|||+      
T Consensus        93 ~~~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLl------  166 (308)
T d1p4oa_          93 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMV------  166 (308)
T ss_dssp             CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEE------
T ss_pred             ecCCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceee------
Confidence            9999999999999 99999998643        11247889999999999999999999999999999999999      


Q ss_pred             cCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCC-----CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHH
Q 015867          209 KLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQN-----HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVEL  283 (399)
Q Consensus       209 ~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el  283 (399)
                                        +.++.+||+|||++......     .....||+.|+|||.+.+..++.++||||||+++|||
T Consensus       167 ------------------d~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El  228 (308)
T d1p4oa_         167 ------------------AEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI  228 (308)
T ss_dssp             ------------------CTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             ------------------cCCceEEEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHH
Confidence                              45778999999998753222     2334689999999999999999999999999999999


Q ss_pred             HhC-CCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchh
Q 015867          284 CTG-EALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDR  362 (399)
Q Consensus       284 l~g-~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  362 (399)
                      +|| .+||.+.+..+.+..+......                                                 ..++.
T Consensus       229 ~t~~~~p~~~~~~~~~~~~i~~~~~~-------------------------------------------------~~p~~  259 (308)
T d1p4oa_         229 ATLAEQPYQGLSNEQVLRFVMEGGLL-------------------------------------------------DKPDN  259 (308)
T ss_dssp             HHTSCCTTTTSCHHHHHHHHHTTCCC-------------------------------------------------CCCTT
T ss_pred             HhCCCCCCCCCCHHHHHHHHHhCCCC-------------------------------------------------CCccc
Confidence            997 5889888887777666432111                                                 11235


Q ss_pred             hhhHHHHHHHHccccCCCCCCCHHHHhC------CccccCC
Q 015867          363 ARSTLTDLLHGLLRYDPSERLTARQALN------HPFFRNL  397 (399)
Q Consensus       363 ~~~~~~~li~~~L~~dP~~R~t~~ell~------hp~f~~~  397 (399)
                      ++..+.+||.+||+.||.+|||+.+|++      +|+|+++
T Consensus       260 ~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~~  300 (308)
T d1p4oa_         260 CPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFREV  300 (308)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHHH
T ss_pred             chHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcCC
Confidence            6788999999999999999999999987      8888764

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-47  Score=352.81  Aligned_cols=244  Identities=16%  Similarity=0.215  Sum_probs=192.6

Q ss_pred             EEEEeeeccccceEEEEEEEccCC---eEEEEEEEec--chhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeecc-CC
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQ---ERVAIKVVRS--IRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDY-RN  141 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~---~~vaiK~~~~--~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~-~~  141 (399)
                      +.+.++||+|+||+||+|++..++   ..||||+++.  .......+..|++++..++      ||||+++++++.. ++
T Consensus        29 ~~~~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~------HpnIv~~~g~~~~~~~  102 (311)
T d1r0pa_          29 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFS------HPNVLSLLGICLRSEG  102 (311)
T ss_dssp             EEEEEEEEEETTEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCC------CTTBCCCCEEEEETTT
T ss_pred             eccceEEeecCCeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCC------CCCEeEEeEEEEecCC
Confidence            344678999999999999976543   3699999864  2334466888999888875      5999999998764 57


Q ss_pred             eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeecccccCCCCcCCCCCC
Q 015867          142 HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEFIKLPGYKRSSSGE  220 (399)
Q Consensus       142 ~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~~~~~~~~~~~~~~  220 (399)
                      ..++||||| +++|.+++..... .+++..+..++.|++.||.|||+.+|+||||||+|||+                  
T Consensus       103 ~~~lv~E~~~~g~l~~~~~~~~~-~~~~~~~~~i~~qia~gL~~lH~~~iiHrDLK~~NILl------------------  163 (311)
T d1r0pa_         103 SPLVVLPYMKHGDLRNFIRNETH-NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCML------------------  163 (311)
T ss_dssp             EEEEEEECCTTCBHHHHHHCTTC-CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEE------------------
T ss_pred             ceEEEEEEeecCchhhhhccccc-cchHHHHHHHHHHHHHhhhhhcccCcccCCccHHhEeE------------------
Confidence            899999999 9999999876543 57888899999999999999999999999999999999                  


Q ss_pred             CCcccCCCCCceEEeecCCcccCCCC-------CcccccCCCccchhhhhCCCCCCcchhHHHHHHHHHHHhCCCCCCCC
Q 015867          221 MPFRCLPKSSAIKLIDFGSTAFDNQN-------HSSIVSTRHYRAPEVILGLGWSYPCDMWSVGCILVELCTGEALFQTH  293 (399)
Q Consensus       221 ~~~~~~~~~~~~kl~Dfg~a~~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~  293 (399)
                            +.++.+||+|||++......       .....||+.|+|||.+.+..++.++||||||+++|||++|..||...
T Consensus       164 ------~~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El~t~~~p~~~~  237 (311)
T d1r0pa_         164 ------DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPD  237 (311)
T ss_dssp             ------CTTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCC-
T ss_pred             ------CCCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHHHHCCCCCCCC
Confidence                  45778999999998753221       22356899999999999999999999999999999999977776543


Q ss_pred             -CcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhhhhhhccchhhhhHHHHHHH
Q 015867          294 -ENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLKNMVSLHVDRARSTLTDLLH  372 (399)
Q Consensus       294 -~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~  372 (399)
                       +..+....+....                       +.                          ..++.++.++.+||.
T Consensus       238 ~~~~~~~~~i~~g~-----------------------~~--------------------------~~p~~~~~~l~~li~  268 (311)
T d1r0pa_         238 VNTFDITVYLLQGR-----------------------RL--------------------------LQPEYCPDPLYEVML  268 (311)
T ss_dssp             -----CHHHHHTTC-----------------------CC--------------------------CCCTTCCHHHHHHHH
T ss_pred             CCHHHHHHHHHcCC-----------------------CC--------------------------CCcccCcHHHHHHHH
Confidence             2222222222111                       00                          112356778899999


Q ss_pred             HccccCCCCCCCHHHHhCC
Q 015867          373 GLLRYDPSERLTARQALNH  391 (399)
Q Consensus       373 ~~L~~dP~~R~t~~ell~h  391 (399)
                      +||+.||.+|||+.|+++|
T Consensus       269 ~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         269 KCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             HHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCHhHCcCHHHHHHH
Confidence            9999999999999999987

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-47  Score=352.34  Aligned_cols=261  Identities=21%  Similarity=0.246  Sum_probs=187.3

Q ss_pred             CCCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCC---
Q 015867           65 TPRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRN---  141 (399)
Q Consensus        65 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~---  141 (399)
                      +.+|.+.+.||+|+||.||+|+.  +|+.||||+++...  ......|.+++    .....+||||+++++++.+++   
T Consensus         2 ~~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~--~~~~~~e~ei~----~~~~~~HpnIv~~~~~~~~~~~~~   73 (303)
T d1vjya_           2 ARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE--ERSWFREAEIY----QTVMLRHENILGFIAADNKDNGTW   73 (303)
T ss_dssp             GGGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG--HHHHHHHHHHH----TSTTCCCTTBCCEEEEEEEECSSS
T ss_pred             CcEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc--hhHHHHHHHHH----HHhhCCCCcCcceEEEEEeCCCcc
Confidence            46799999999999999999975  68899999986532  23333443333    333356899999999987643   


Q ss_pred             -eEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH--------CCccccCCCCCcEEEeecccccCC
Q 015867          142 -HICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHD--------LRLIHTDLKPENILLVSSEFIKLP  211 (399)
Q Consensus       142 -~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~--------~givH~Dikp~NIll~~~~~~~~~  211 (399)
                       .+|+||||+ +|+|.+++++.+   +++.....++.|++.||+|||+        +|||||||||+||||         
T Consensus        74 ~~~~lv~Ey~~~g~L~~~l~~~~---l~~~~~~~~~~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl---------  141 (303)
T d1vjya_          74 TQLWLVSDYHEHGSLFDYLNRYT---VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV---------  141 (303)
T ss_dssp             EEEEEEEECCTTCBHHHHHHHCC---BCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEE---------
T ss_pred             eEEEEEEecccCCCHHHHHhcCC---CCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCeeccccCccceEE---------
Confidence             689999999 999999998764   8999999999999999999996        599999999999999         


Q ss_pred             CCcCCCCCCCCcccCCCCCceEEeecCCcccCCC-------CCcccccCCCccchhhhhCCC------CCCcchhHHHHH
Q 015867          212 GYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQ-------NHSSIVSTRHYRAPEVILGLG------WSYPCDMWSVGC  278 (399)
Q Consensus       212 ~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~-------~~~~~~gt~~y~aPE~~~~~~------~~~~~DiwslG~  278 (399)
                                     +.++.+||+|||++.....       .....+||+.|+|||++.+..      ++.++|||||||
T Consensus       142 ---------------~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~k~Di~S~Gv  206 (303)
T d1vjya_         142 ---------------KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGL  206 (303)
T ss_dssp             ---------------CTTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHH
T ss_pred             ---------------cCCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCcchhhhhhHH
Confidence                           4567899999998865322       223567999999999997653      577899999999


Q ss_pred             HHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCCHHHHHHhcccccccccCCcccCCCCCccchHHHHHHHhhhhhh-hh-h
Q 015867          279 ILVELCTGEALFQTHENLEHLAMMERALGPLPEHMIRRASRGTEKYFRRGSRLNWPEGAVSRESIKAVKKLDRLK-NM-V  356 (399)
Q Consensus       279 il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-~~-~  356 (399)
                      +||||+||..||..........                              ....................... .+ .
T Consensus       207 vl~el~tg~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~~~~p~~~~  256 (303)
T d1vjya_         207 VFWEIARRCSIGGIHEDYQLPY------------------------------YDLVPSDPSVEEMRKVVCEQKLRPNIPN  256 (303)
T ss_dssp             HHHHHHHTBCBTTBCCCCCCTT------------------------------TTTSCSSCCHHHHHHHHTTSCCCCCCCG
T ss_pred             HHHHHhhCCCCCCcccccccch------------------------------hhcccccchHHHHHHHHhccccCCCCCc
Confidence            9999999998885432210000                              00000000000110000000000 00 0


Q ss_pred             hccchhhhhHHHHHHHHccccCCCCCCCHHHHhC
Q 015867          357 SLHVDRARSTLTDLLHGLLRYDPSERLTARQALN  390 (399)
Q Consensus       357 ~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~  390 (399)
                      ..........+.+|+.+||+.||.+|||+.||++
T Consensus       257 ~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ei~~  290 (303)
T d1vjya_         257 RWQSCEALRVMAKIMRECWYANGAARLTALRIKK  290 (303)
T ss_dssp             GGGGCHHHHHHHHHHHTTCCSSGGGSCCHHHHHH
T ss_pred             ccCChHHHHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            1112334567899999999999999999999976

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.92  E-value=1.1e-25  Score=192.30  Aligned_cols=163  Identities=20%  Similarity=0.228  Sum_probs=111.0

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchh-------------------hhHHHHHHHHHHHHhhhcCCCCCc
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRK-------------------YRDAAMIEIDVLQHLAKNDKGGSS  128 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-------------------~~~~~~~e~~~l~~l~~~~~~~~~  128 (399)
                      +.+.++||+|+||+||+|.+. +|+.||||+++....                   .......|...+..+.      +.
T Consensus         2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~------~~   74 (191)
T d1zara2           2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ------GL   74 (191)
T ss_dssp             SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT------TS
T ss_pred             chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHcc------CC
Confidence            457899999999999999874 689999998753111                   0112233555555554      35


Q ss_pred             ceeeeceeeccCCeEEEEEccC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCCCcEEEeeccc
Q 015867          129 HCVQIRNWFDYRNHICIVFEKL-GPSLFDFLKRNKYCPFPVDLVREFGRQLLESVAYMHDLRLIHTDLKPENILLVSSEF  207 (399)
Q Consensus       129 ~iv~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~givH~Dikp~NIll~~~~~  207 (399)
                      +++..+++..    .++||||+ +..+.         .++...+..++.||+.+|+|||++||+||||||+|||++.   
T Consensus        75 ~v~~~~~~~~----~~lvme~~~~~~~~---------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~~---  138 (191)
T d1zara2          75 AVPKVYAWEG----NAVLMELIDAKELY---------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVSE---  138 (191)
T ss_dssp             SSCCEEEEET----TEEEEECCCCEEGG---------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEET---
T ss_pred             CcceEEEecC----CEEEEEeecccccc---------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeeeC---
Confidence            6666655432    37999999 44332         2455567789999999999999999999999999999953   


Q ss_pred             ccCCCCcCCCCCCCCcccCCCCCceEEeecCCcccCCCCCcccccCCCccch--h---hhhCCCCCCcchhHHHHHHH
Q 015867          208 IKLPGYKRSSSGEMPFRCLPKSSAIKLIDFGSTAFDNQNHSSIVSTRHYRAP--E---VILGLGWSYPCDMWSVGCIL  280 (399)
Q Consensus       208 ~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~gt~~y~aP--E---~~~~~~~~~~~DiwslG~il  280 (399)
                                            ..++|+|||.|.........     .|...  +   .+....|+.++|+||+.--+
T Consensus       139 ----------------------~~~~liDFG~a~~~~~~~~~-----~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~~  189 (191)
T d1zara2         139 ----------------------EGIWIIDFPQSVEVGEEGWR-----EILERDVRNIITYFSRTYRTEKDINSAIDRI  189 (191)
T ss_dssp             ----------------------TEEEECCCTTCEETTSTTHH-----HHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred             ----------------------CCEEEEECCCcccCCCCCcH-----HHHHHHHHHHHHHHcCCCCCcccHHHHHHHH
Confidence                                  33899999988654322110     11111  1   11235688999999976443

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=98.42  E-value=4.9e-07  Score=78.71  Aligned_cols=85  Identities=11%  Similarity=0.056  Sum_probs=58.9

Q ss_pred             CCEEEEeeeccccceEEEEEEEccCCeEEEEEEEecch-hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEE
Q 015867           66 PRYKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR-KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHIC  144 (399)
Q Consensus        66 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~  144 (399)
                      +.|++.+..+.++.+.||+..  .+++.++||+..... ........|..+++.+..     +--+.+++.+..+++..+
T Consensus        14 ~~~~~~~~~~G~s~~~v~rv~--~~~~~~vlk~~~~~~~~~~~~~~~E~~~l~~l~~-----~vpvP~vl~~~~~~~~~~   86 (263)
T d1j7la_          14 EKYRCVKDTEGMSPAKVYKLV--GENENLYLKMTDSRYKGTTYDVEREKDMMLWLEG-----KLPVPKVLHFERHDGWSN   86 (263)
T ss_dssp             TTSEEEECSCCCSSSEEEEEE--CSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTT-----TSCCCCEEEEEEETTEEE
T ss_pred             hceEEEEcCCCCCCCcEEEEE--eCCCeEEEEEcCCCcccchhhHHHHHHHHHHHhc-----cCCCCcEEEEEecCCceE
Confidence            467888776666667999874  455567889875432 223346778888888863     123566677777788999


Q ss_pred             EEEccC-CCCHHHH
Q 015867          145 IVFEKL-GPSLFDF  157 (399)
Q Consensus       145 lv~e~~-~~~L~~~  157 (399)
                      +||+++ |.++.+.
T Consensus        87 lv~~~l~G~~~~~~  100 (263)
T d1j7la_          87 LLMSEADGVLCSEE  100 (263)
T ss_dssp             EEEECCSSEEHHHH
T ss_pred             EEEEeccccccccc
Confidence            999999 7676544

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=98.00  E-value=1.6e-05  Score=73.33  Aligned_cols=76  Identities=18%  Similarity=0.209  Sum_probs=48.2

Q ss_pred             EeeeccccceEEEEEEEccCCeEEEEEEEecch--------hhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCe
Q 015867           71 LSKMGEGTFGRVLECWDRQTQERVAIKVVRSIR--------KYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNH  142 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--------~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~  142 (399)
                      .+.||.|....||++.+..+++.++||.-....        ........|.++++.+.....   ..+++++.+  +.+.
T Consensus        31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p---~~vP~v~~~--d~~~  105 (392)
T d2pula1          31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVP---HLVPRVFYS--DTEM  105 (392)
T ss_dssp             EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCG---GGSCCEEEE--ETTT
T ss_pred             EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCC---CCcceEEEE--cCCC
Confidence            456899999999999887778889999754211        112335568888888764321   245555543  3455


Q ss_pred             EEEEEccCC
Q 015867          143 ICIVFEKLG  151 (399)
Q Consensus       143 ~~lv~e~~~  151 (399)
                      .++|||+++
T Consensus       106 ~~lvmE~L~  114 (392)
T d2pula1         106 AVTVMEDLS  114 (392)
T ss_dssp             TEEEECCCT
T ss_pred             CEEEEeccC
Confidence            678999993

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=97.91  E-value=1.1e-05  Score=69.58  Aligned_cols=75  Identities=16%  Similarity=0.120  Sum_probs=51.8

Q ss_pred             eeccccc-eEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeEEEEEccC-
Q 015867           73 KMGEGTF-GRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHICIVFEKL-  150 (399)
Q Consensus        73 ~lG~G~~-g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~~-  150 (399)
                      .+..|.. +.||+... .++..+++|......  ...+..|..+++.+....    -.+.+++.+..+.+..++||+++ 
T Consensus        17 ~~~~G~s~~~v~r~~~-~~~~~~vlK~~~~~~--~~~l~~E~~~l~~L~~~g----vpvP~v~~~~~~~~~~~~v~~~i~   89 (255)
T d1nd4a_          17 QQTIGCSDAAVFRLSA-QGRPVLFVKTDLSGA--LNELQDEAARLSWLATTG----VPCAAVLDVVTEAGRDWLLLGEVP   89 (255)
T ss_dssp             ECSCTTSSCEEEEEEC-TTSCCEEEEEECSCT--TSCHHHHHHHHHHHHTTT----CCBCCEEEEEECSSCEEEEEECCS
T ss_pred             EcCCcccCCeEEEEEe-CCCCEEEEEeCCccC--HhHHHHHHHHHHHHHhcC----CCCCceeeecccccceEEEEEeee
Confidence            4445543 68898864 456668899875432  345677899998887532    23666777777788999999999 


Q ss_pred             CCCH
Q 015867          151 GPSL  154 (399)
Q Consensus       151 ~~~L  154 (399)
                      |.++
T Consensus        90 G~~~   93 (255)
T d1nd4a_          90 GQDL   93 (255)
T ss_dssp             SEET
T ss_pred             cccc
Confidence            5443

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.0004  Score=61.81  Aligned_cols=70  Identities=20%  Similarity=0.277  Sum_probs=47.0

Q ss_pred             eEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeec--eeeccCCeEEEEEccCC
Q 015867           80 GRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIR--NWFDYRNHICIVFEKLG  151 (399)
Q Consensus        80 g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~--~~~~~~~~~~lv~e~~~  151 (399)
                      -.||++.. .+|..|++|+.+.......+...|...+..|...... .+..+..-  ..+...+..+.|+++++
T Consensus        36 N~vy~v~~-~dg~~~VlK~~rp~~~s~~~i~~E~~~l~~L~~~gip-v~~p~~~~g~~~~~~~~~~~~l~~~~~  107 (325)
T d1zyla1          36 NRVYQFQD-EDRRRFVVKFYRPERWTADQILEEHQFALQLVNDEVP-VAAPVAFNGQTLLNHQGFYFAVFPSVG  107 (325)
T ss_dssp             SEEEEECC-TTCCCEEEEEECTTTSCHHHHHHHHHHHHHHHHTTCS-BCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred             ceeEEEEc-CCCCEEEEEEeCCCCCCHHHHHHHHHHHHHHHhcCCC-CCCceecCCCeeeeeeeEEEEEEeecC
Confidence            58999864 5678899999987655567778899999999865421 11112211  12234677899999983

>d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Choline kinase
domain: Choline kinase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.89  E-value=0.0016  Score=59.43  Aligned_cols=70  Identities=13%  Similarity=0.150  Sum_probs=47.1

Q ss_pred             EeeeccccceEEEEEEEcc-------CCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcCCCCCcceeeeceeeccCCeE
Q 015867           71 LSKMGEGTFGRVLECWDRQ-------TQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKNDKGGSSHCVQIRNWFDYRNHI  143 (399)
Q Consensus        71 ~~~lG~G~~g~V~~~~~~~-------~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~  143 (399)
                      ++.|+.|-.-.+|++....       .++.|.+++.-... .......|..+++.+....     -.++++.++.+    
T Consensus        47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g~~~-~~idr~~E~~i~~~ls~~g-----l~Pkll~~~~~----  116 (395)
T d1nw1a_          47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE-TESHLVAESVIFTLLSERH-----LGPKLYGIFSG----  116 (395)
T ss_dssp             EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC-CHHHHHHHHHHHHHHHHTT-----SSSCEEEEETT----
T ss_pred             EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecCCcc-hhhHHHHHHHHHHHHHhCC-----CCCeEEEEcCC----
Confidence            4678888889999987543       34567788765322 2344567899999887632     23466666653    


Q ss_pred             EEEEccC
Q 015867          144 CIVFEKL  150 (399)
Q Consensus       144 ~lv~e~~  150 (399)
                      .+||||+
T Consensus       117 g~I~efi  123 (395)
T d1nw1a_         117 GRLEEYI  123 (395)
T ss_dssp             EEEECCC
T ss_pred             ceEEEEe
Confidence            6889998

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.66  E-value=0.0054  Score=53.73  Aligned_cols=53  Identities=11%  Similarity=0.134  Sum_probs=33.0

Q ss_pred             EEEEeeeccccceEEEEEEEccCCeEEEEEEEecchhhhHHHHHHHHHHHHhhhcC
Q 015867           68 YKILSKMGEGTFGRVLECWDRQTQERVAIKVVRSIRKYRDAAMIEIDVLQHLAKND  123 (399)
Q Consensus        68 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~  123 (399)
                      ..-.+.|..|---+.|+.... +| .|++|++... ........|.+++..|....
T Consensus        20 ~~~~~~i~~G~~N~ny~v~t~-~g-~yVLri~~~~-~~~~~l~~~~~~l~~L~~~g   72 (316)
T d2ppqa1          20 LTSYKGIAEGVENSNFLLHTT-KD-PLILTLYEKR-VEKNDLPFFLGLMQHLAAKG   72 (316)
T ss_dssp             EEEEEEECC---EEEEEEEES-SC-CEEEEEECC----CCHHHHHHHHHHHHHHTT
T ss_pred             ceEeecCCCCcccCeEEEEEC-CC-cEEEEEcCCC-CCHHHHHHHHHHHHhhhhcc
Confidence            445566777887889998643 34 4899998653 22345566788888887654